quadgram

This is a table of type quadgram and their frequencies. Use it to search & browse the list to learn more about your study carrel.

quadgram frequency
severe acute respiratory syndrome149
in the supplemental material144
s in the supplemental108
middle east respiratory syndrome79
acute respiratory syndrome coronavirus79
east respiratory syndrome coronavirus60
in the lungs of52
in the absence of51
table s in the47
in the presence of46
of severe acute respiratory44
h n influenza virus36
in the case of32
in the united states31
see table s in29
at an moi of28
in the context of25
has been shown to24
activation of rnase l22
h n influenza a22
cov nsp and nsp22
of middle east respiratory22
article may be found21
for this article may21
material for this article21
supplemental material for this21
may be found at21
this article may be21
n and h n21
a h n virus20
porcine epidemic diarrhea virus19
at the time of19
human immunodeficiency virus type19
it is possible that19
putative small rna loci18
the severe acute respiratory18
of nsp and nsp18
was added to the18
highly pathogenic avian influenza18
n influenza a virus17
for the presence of17
de genes at hpi17
a in the supplemental17
s a in the17
cells were infected with17
h n and h16
of the viroporin domain15
on influenza virus transmission15
on the basis of15
the presence of the15
the host response to15
it is important to15
with the exception of15
of allergy and infectious14
of h n influenza14
influenza a h n14
of influenza a virus14
national institutes of health14
allergy and infectious diseases14
as well as the13
a multiplicity of infection13
cells were cultured in13
similar to that of13
of the urokinase pathway13
national institute of allergy13
of a novel coronavirus13
respiratory droplets or aerosols13
similar to those of13
via respiratory droplets or13
institute of allergy and13
acute respiratory distress syndrome13
these data suggest that13
p x r ko13
pathogens with pandemic potential13
have been deposited in12
be found at http12
after the onset of12
to that of the12
at a multiplicity of12
at the end of12
org lookup suppl doi12
at room temperature for12
x r ko mice11
to determine whether the11
for the development of11
of the h n11
the national institutes of11
it has been shown11
fatty acid and pl11
the onset of symptoms11
the innate immune response11
of the p x11
these results indicate that11
a novel coronavirus from11
in vitro and in11
in the setting of11
human parainfluenza virus type11
on the cell surface11
thermo scientific catalog no11
with fetal bovine serum11
by the use of10
for min at room10
the presence of a10
the lungs of the10
coexpression of nsp and10
was used as a10
at the same time10
were exposed to sars10
in the present study10
min at room temperature10
the p x receptor10
cultured in the presence10
be found at https10
cells were transfected with10
important to note that10
by the presence of10
in balb c mice10
a wide range of10
is important to note10
the members of the10
vitro and in vivo10
see materials and methods10
c bl j mice10
the united states and10
an important role in10
in contrast to the10
supplemented with fetal bovine10
these results suggest that10
respiratory syndrome coronavirus in9
observed in the lungs9
our understanding of the9
see the supplemental material9
of highly pathogenic avian9
cells were exposed to9
with pneumonia in saudi9
the end of the9
from a man with9
in table s in9
peripheral blood mononuclear cells9
were found to be9
in addition to the9
coronavirus from a man9
isolation of a novel9
for the first time9
to induce dmv formation9
the middle east respiratory9
of the viral genome9
of t cell activation9
venezuelan equine encephalitis virus9
university of north carolina9
of onward transmission from9
the p x r9
droplets or aerosols between9
immune reconstitution inflammatory syndrome9
the formation of dmvs9
man with pneumonia in9
cells were treated with9
h n influenza viruses9
a man with pneumonia9
to those of the9
of rna virus evolution9
pneumonia in saudi arabia9
of the fatty acid9
novel potential pandemic pathogens9
we were able to9
the activation of the9
performed as previously described9
brief exposure to culture9
at the university of9
acid and pl synthesis9
on the other hand9
novel coronavirus from a9
influenza virus h n9
h n virus in9
or aerosols between ferrets9
to further confirm the8
mbcs reactive to the8
disease control and prevention8
it is difficult to8
room temperature for min8
of hepatitis c virus8
the h n influenza8
those of the pbs8
and cultured in the8
centers for disease control8
it is likely that8
stained with hematoxylin and8
h at room temperature8
had no effect on8
debate and research pause8
cells were stained with8
the lungs of mice8
response to virus infection8
with hematoxylin and eosin8
a large number of8
the erasmus mc facility8
the absence of the8
in the erasmus mc8
virus titers in the8
in the pathogenesis of8
the national institute of8
supplemental material is available8
are shown in fig8
is consistent with the8
the increased delivery of8
in the middle east8
at the level of8
ko and wt mice8
it is known that8
of the immune response8
the public health risks8
respiratory syndrome coronavirus infection8
hek and vero cells8
the role of the8
c bl mefs were8
the s protein of8
is available online only8
the ebola virus glycoprotein8
virus transmission between ferrets8
was observed in the8
changes in expression of8
the lungs of sars8
public health risks revisited8
material is available online8
as well as in8
in mice infected with8
at late times postinfection8
mutations in nsp and8
text s in the8
of the university of8
has been shown that8
vivo and in vitro8
probability of onward transmission8
in vivo and in8
influenza virus transmission between8
the first time that8
infected c bl j8
a critical role in8
animal care and use7
most closely related to7
c bl j and7
tumor necrosis factor alpha7
of human parainfluenza virus7
and h n influenza7
were recovered from horses7
cells were incubated for7
insertion of the viroporin7
of porcine epidemic diarrhea7
of the authors and7
length infectious cdna of7
clinical signs of disease7
airborne transmission of influenza7
number of de genes7
the driving force for7
been shown to be7
innate immune response to7
in nsp and nsp7
the large number of7
loci that overlapped with7
in the ko mice7
cd t cell response7
for the formation of7
of the rdrp tree7
of the ebola virus7
of the nsp nsp7
of rnase l during7
virus titers in nasal7
studies on influenza virus7
the lungs of c7
at this time point7
with those of the7
as the primary antibody7
weeks after the onset7
for disease control and7
were infected with sinv7
care and use committee7
membrane insertion of the7
pathogenic avian influenza a7
with severe acute respiratory7
pandemic h n influenza7
transmission via respiratory droplets7
into hek et cells7
was found to be7
the fatty acid and7
to multiple nucleoside analogues7
into hek t cells7
igg mbcs reactive to7
bl j and c7
mice infected with a7
of mouse adenovirus type7
play an important role7
the virus titers in7
for h at room7
and middle east respiratory7
a member of the7
enhanced green fluorescent protein7
play a role in7
influenza virus a anhui7
h n virus between7
of the innate immune7
to severe acute respiratory7
genes of unknown function7
n virus between ferrets7
the ability of the7
the context of the7
were similar to those7
are known to be7
value represents the mean7
students and postdoctoral fellows7
the specificity of the7
by northern blot analysis7
we were unable to7
characterization of a novel7
supported in part by7
these results demonstrate that7
is not required for7
our data suggest that7
upper and lower respiratory7
in the gp core6
the reaction products were6
mice compared to the6
involving pathogens with pandemic6
were stained with hematoxylin6
transmission of h n6
human airway epithelial cells6
these data indicate that6
evolution of rna viruses6
loss and release reports6
of rnase l in6
cells exposed to sars6
the transfected cells were6
e protein in trans6
transmission of influenza a6
have been shown to6
t cell activation and6
the absence of complement6
monitoring select agent theft6
used in this study6
is a functional receptor6
in c bl mefs6
receptor binding site ii6
graduate students and postdoctoral6
from the cell surface6
virus in the future6
with the presence of6
standard deviation from three6
we are grateful to6
eptesicus fuscus skin fibroblasts6
suppression of t cell6
igg against the sars6
the views of the6
health and human services6
the number of years6
significantly higher than that6
linked glycans on gp6
cov m gene product6
been reported to be6
salmonella enterica serovar typhi6
mice infected with pfu6
each value represents the6
of the host response6
of the middle east6
analyzed for the presence6
and influenza a virus6
of deformed wing virus6
influenza a virus infection6
branches of the rdrp6
virus replication in the6
influenza virus transmission via6
in cells infected with6
research on influenza virus6
s b and c6
rift valley fever virus6
department of health and6
within the gp core6
as a function of6
rpmi medium supplemented with6
upstream of rna release6
were obtained from the6
our results suggest that6
in the face of6
and the cells were6
of influenza a h6
of the severe acute6
work was supported by6
we found that the6
convalescent subjects than in6
and release reports in6
antibody responses to sars6
risks and benefits of6
during influenza virus infection6
and pl synthesis pathways6
the total number of6
reports in the united6
to be associated with6
was used as the6
major histocompatibility complex class6
the binding of niv6
rna was extracted from6
infected p x r6
that were differentially expressed6
on taxonomy of viruses6
use research of concern6
of pandemic influenza a6
is known to be6
of the complement pathway6
in response to virus6
h n avian influenza6
the probability of onward6
against severe acute respiratory6
the antigen presentation pathway6
c bl mice were6
k r sv mefs6
and veroe tmprss cells6
after influenza virus infection6
did not affect the6
in accordance with the6
at the site of6
been deposited in genbank6
small rna loci that6
the international committee on6
the purinergic receptor p6
high concentrations of ppgpp6
nsp and nsp are6
of the s protein6
b in the supplemental6
committee on taxonomy of6
of c bl j6
s b in the6
medium was replaced with6
human respiratory syncytial virus6
cleavage of the nsp6
induced acute lung injury6
the basis of the6
cells were fixed with6
these results suggested that6
of putative small rna6
incubated for h at6
the development of a6
not seem to be6
crystal structure of the6
cells were seeded in6
vero a and huh6
the exception of the6
as a result of6
vero cells infected with6
international committee on taxonomy6
purinergic receptor p x6
highly pathogenic h n6
were observed in the6
cells were incubated with6
the case of the6
was supported by nih6
determined by plaque assay6
a functional receptor for6
to the lack of6
epidemic of respiratory disease6
the glycan cap and6
s subunit of the6
of a h n6
from each cluster were6
the host immune response6
it has been reported6
as shown in fig6
a broad range of6
were incubated for h6
virus transmission via respiratory6
the lgi network of6
not necessarily reflect the6
at both time points6
henipavirus infection in cis6
avian h n influenza6
to the formation of6
of health and human6
innate and adaptive immune6
release reports in the6
veroe tmprss cells were6
on research intended to5
protection against h n5
of fatty acid synthesis5
these data demonstrate that5
for a single lab5
rbd and s subunit5
and s in the5
we do not know5
of the national institutes5
a measure of the5
cytopathic effect of sars5
reactivity to h n5
pathology of severe acute5
that the number of5
to the s subunit5
production of proinflammatory cytokines5
the results of the5
in text s in5
the s proteins of5
the e protein in5
amplified by pcr using5
phylogenetic analysis of the5
the activation of rnase5
protein may function as5
the cells were infected5
were included in the5
the consequences of a5
and does not necessarily5
mice than in the5
of avian influenza a5
did not result in5
incubated for min at5
is mediated by the5
the university of north5
were significantly higher in5
virus infection in mice5
are available upon request5
that this is a5
peptidase is a functional5
the expression of gp5
immunization with piv expressing5
institutional animal care and5
the cells were incubated5
cells were maintained in5
consequences of a lab5
c bl mefs and5
the pandemic h n5
but not in the5
work has shown that5
driving force for m5
do not necessarily reflect5
reverse genetics with a5
separation was performed on5
host response to infection5
effect on ev infection5
african green monkey kidney5
in the natural host5
for the generation of5
this work was supported5
required for pkr degradation5
the rest of the5
of small rnas in5
to address this issue5
small rna loci overlapped5
the antiviral activity of5
protease inhibitor cocktail kit5
in order to identify5
and cells were incubated5
s and table s5
pathogenic h n influenza5
to the development of5
were cultured in rpmi5
of igg against the5
the h n virus5
a lethal dose of5
e orf and e5
and g ml streptomycin5
aids research and reference5
were performed using the5
to provide protection against5
one of the most5
authors and does not5
to the number of5
to influenza a virus5
functional receptor for the5
the infectious cdna clone5
and elapsed time for5
influenza a virus in5
pellets were resuspended in5
rna was extracted using5
the catalytic domain of5
the authors and does5
the icelandic horse population5
neutral red infectious center5
of at least identical5
for escape of a5
intended to create novel5
in materials and methods5
our data indicate that5
for the study of5
immunized with combo smq5
will be required to5
moratorium on research intended5
of the virus to5
cells were washed with5
of streptococcus equi subsp5
novel coronavirus associated with5
the mouse reference genome5
of h n viruses5
the ucsc genome browser5
cells were washed and5
for the emerging human5
expression in response to5
for min and then5
and the number of5
infection from his laboratory5
as a measure of5
was performed to detect5
small rna libraries from5
view of the network5
cov and influenza virus5
total pkr mrna levels5
a reverse genetics system5
cells were allowed to5
reportedly active against sars5
in a mouse model5
the result is representative5
was performed as previously5
reflect the views of5
of small rnas from5
the m gene product5
in the integral membrane5
primary human airway epithelial5
necessarily reflect the views5
is shown in fig5
at each time point5
during the course of5
calculation of risk and5
h n h n5
mg kg of body5
of the complement system5
the rbd and s5
of influenza virus infection5
resistance to multiple nucleoside5
min hold at b5
veroe cells were exposed5
of a potential pandemic5
the disease among humans5
recombinant parainfluenza virus expressing5
and adaptive immune responses5
our results indicate that5
the majority of the5
to create novel potential5
ph n and h5
of influenza a viruses5
of risk and elapsed5
from the national institutes5
result is representative of5
gene set enrichment analysis5
als p and als5
a potential pandemic pathogen5
for the treatment of5
the expression of the5
in bat roni cells5
with acute respiratory distress5
of ph n and5
due to the small5
in cells treated with5
in convalescent subjects than5
escape of a potential5
with piv expressing mers5
coronavirus associated with severe5
either niv or hev5
may function as a5
were unable to detect5
the emerging human coronavirus5
the emergence of sars5
isolation and characterization of5
of the spike protein5
are also likely to5
infected with nl virus5
risk and elapsed time5
we observed a significant5
escape of a laboratory5
use of highly pathogenic5
supported by nih grant5
the absence of c5
lab escape of a5
mock infected or infected5
receptor for the emerging5
its w a mutant5
was amplified by pcr5
inoculated with a anhui5
not necessarily represent the5
loci overlapped with annotated5
has been reported that5
data are consistent with5
and lower respiratory tracts5
the mechanisms by which5
of mouse hepatitis virus5
genetics with a full5
to determine if the5
in the tigers and5
reactive to the s5
we have shown that5
dmem supplemented with fbs5
it remains to be5
experiments were performed in5
a significant increase in5
viruses isolated from humans5
the global rna virome5
acute lung injury and5
the importance of the5
subunit of the spike5
at least identical experiments5
surveillance and pandemic preparedness5
in hek t cells5
of the de genes5
for activation of rnase5
of igg mbcs reactive5
the binding of n5
a lab escape of5
plays a role in5
pkr mrna bound to5
the influenza virus ns5
nih national institute of5
were approved by the5
to b in min5
in the number of5
of the m gene5
incubation at room temperature5
the evolution of rna5
of the role of5
the debate and research5
the vast majority of5
the s subunit of5
representative of at least5
the replication of the5
in the research enterprise5
in close proximity to5
activation of the p5
for the induction of5
in the development of5
can be used to5
to the plasma membrane5
in patients with severe5
kg of body weight5
of human immunodeficiency virus5
including the efforts of5
the site of infection5
in the lethal dose5
the upper and lower5
the tigers and lions5
is representative of at5
research and reference reagent5
was performed on a5
in our understanding of5
of a lab escape5
that the absence of5
investigated the role of5
nsp and nsp were5
resuspended in l of5
time for escape of5
dipeptidyl peptidase is a5
the accumulation of the5
influenza virus infection in5
diversity of rna viruses5
the hn dimer interface5
and cytopathic effect of5
elapsed time for escape5
significant differences were observed5
for each of the5
the complement system is5
see also table s5
acquired infection from his5
and reference reagent program5
levels of igg against5
signs of respiratory disease5
the case of sars5
the receptor binding domain5
the urokinase pathway in5
p and als p5
is one of the5
research intended to create5
influenza virus ns protein5
the upregulation of cd5
in the evolution of5
as a vaccine candidate5
inflammatory cells in the5
of rnase l is5
mice immunized with combo5
create novel potential pandemic5
in the production of4
in the endoplasmic reticulum4
responsibility of the authors4
analyzed them by immunoblotting4
representatives from each cluster4
cell responses to influenza4
bat coronaviruses shows potential4
bl j mice than4
is a common feature4
in dc in the4
had no role in4
was supported by grants4
the to range found4
mean od value of4
in the activation of4
the university of iowa4
the adaptive immune response4
the following binary gradient4
cells were harvested and4
characterized by the presence4
lung pathology was scored4
to determine the role4
the infectivity and replication4
with novel potential pandemic4
lung samples collected from4
also de at hpi4
is responsible for the4
rna loci overlapped with4
does not seem to4
undetected or unreported lai4
from three independent tests4
the h q mutation4
binding domain of the4
genomic characterization of a4
nsp and nsp and4
rna loci that overlapped4
was replaced with fresh4
and eptesicus fuscus skin4
reassortant h ha h4
on the surface of4
was calculated using the4
by nih grant ai4
viral rna from the4
of rna viruses in4
related to those of4
in the expression of4
branches of rna viruses4
glycans on the gp4
deviation from three independent4
h ha confers respiratory4
identification of a novel4
with respect to the4
errors of the means4
hcovs oc and e4
ko mice compared to4
on the value of4
n influenza virus infection4
the use of a4
the absence or presence4
is solely the responsibility4
at least two independent4
to estimate unknown viral4
from different groups of4
cytokine and chemokine protein4
in the p x4
directly from clinical samples4
and its role in4
the major branches of4
cultured in rpmi medium4
and influenza virus infections4
after staining with dapi4
better understanding of the4
the onset of clinical4
compared to healthy controls4
seroevidence for h n4
approved drugs against sars4
activation of the complement4
absence or presence of4
influenza virus in ferrets4
represent the official views4
and e b k4
of the predict pdf4
innate and adaptive immunity4
medium was added to4
open reading frame a4
the time of this4
infectivity and replication of4
was also used to4
has been previously reported4
of the cells were4
the emergence of mers4
indicate p values of4
the probability of an4
replication of the viral4
influenza h ha confers4
of h n virus4
the icelandic veterinary institute4
overlapped with annotated loci4
the fact that these4
it was shown that4
in the lung following4
each lab in the4
an influx of eosinophils4
respiratory syncytial virus infection4
and characterization of a4
to virus infection and4
for h and then4
and benefits of gain4
were recovered from the4
to the small number4
as a potential therapeutic4
numbers of putative small4
of pkr mrna bound4
swabs and tracheal wash4
the fatty acid pathway4
at the icelandic veterinary4
the content is solely4
n influenza infections in4
in the perinuclear region4
it is unclear whether4
macaques inoculated with a4
was calculated as the4
was significantly higher than4
as a surrogate for4
virus infection in a4
previous work has shown4
without ca and mg4
spr analysis of the4
likely to work on4
and replication of sars4
function as a cytosolic4
s protein of the4
as a novel cytosolic4
n genetic changes inventory4
characterization of a newly4
a reassortant h ha4
lungs of c bl4
at the nucleotide level4
would be expected to4
were fixed with formaldehyde4
of respiratory syncytial virus4
of circulating bat coronaviruses4
cells as previously described4
due to the lack4
required for entry into4
of group a streptococcal4
associated with de genes4
nt region of the4
to a reassortant h4
optical density at nm4
a strategy to estimate4
systematic review and meta4
hhs nih national institute4
infection with influenza a4
cluster of circulating bat4
an moi of and4
of the journal or4
confirmed the presence of4
with influenza virus a4
mice than in those4
journal or of asm4
analyses were performed using4
higher in convalescent subjects4
of the disease among4
that they are modified4
in the lgi network4
the rate at which4
the level of the4
materials and methods for4
were collected at hpi4
entry mediated by the4
hek t cells were4
for molecularbased surveillance and4
gp was expressed with4
from inside the cells4
biosynthesis in escherichia coli4
of h n avian4
analysis of the binding4
were determined by plaque4
by immunoblotting with antibodies4
reduce the probability of4
room temperature for h4
disease in aged mice4
levels of pkr mrna4
titers in nasal washes4
solely the responsibility of4
a significant reduction in4
immunized with pfu piv4
expressed in hela cells4
estimate unknown viral diversity4
in the upper respiratory4
necessarily represent the official4
after min of incubation4
s a and s4
with bovine serum albumin4
on pathogens with pandemic4
cells infected with mers4
titers in the lung4
between nsp and nsp4
mice immunized with inactivated4
the t m value4
h n and other4
has been associated with4
way analysis of variance4
u ml of penicillin4
there has been a4
revealed the presence of4
classes of small rnas4
we sought to determine4
data indicate that the4
a novel coronavirus associated4
a final concentration of4
conducted in accordance with4
when veroe cells were4
led to the formation4
of interferon regulatory factor4
the c terminus of4
escape of potential pandemic4
respiratory syndrome coronavirus vaccine4
the immune response to4
supported by grants from4
of a newly discovered4
the inhibitory effect of4
by a maximum of4
we have demonstrated that4
the ph n m4
by quantitative reverse transcription4
was funded by hhs4
these data indicated that4
a flow rate of4
in dromedary camels in4
seasonal h n influenza4
the potential impact of4
h n virus to4
these data demonstrate the4
newly discovered coronavirus associated4
of at least one4
views expressed in this4
for min to remove4
expressing the e protein4
like cluster of circulating4
infected at an moi4
immunoblotting with antibodies to4
n virus in ferrets4
circulating bat coronaviruses shows4
the common ancestor of4
is supported in part4
lc ms quantification of4
of rnase l by4
within the icelandic horse4
the cells were cultured4
the innate immune system4
than in those of4
a bacterial artificial chromosome4
total rna was extracted4
or influenza virus infection4
the small number of4
does not appear to4
of an outbreak of4
experimental adaptation of an4
n influenza virus in4
is based on the4
cynomolgus macaques inoculated with4
cells were lysed with4
the spike protein of4
such as influenza virus4
asterisks indicate p values4
no effect on ev4
the views expressed in4
for clinical signs of4
the formation of the4
than in unexposed subjects4
as shown in the4
of potential pandemic influenza4
s and s in4
we also examined the4
influenza risk assessment tool4
a newly discovered coronavirus4
the p x ko4
of a series of4
the journal or of4
as assessed by bioanalyzer4
as a negative control4
compared with those of4
an influenza h ha4
by hhs nih national4
the dimer interface footprint4
that are associated with4
when march was expressed4
were washed once with4
added to the plate4
as a positive control4
where the restriction site4
and weeks after the4
groups were compared using4
the construction of a4
this is a common4
mice were immunized with4
of the binding of4
of veroe tmprss cells4
mers virus in the4
droplet transmission to a4
was not required for4
ha confers respiratory droplet4
that nsp viroporin activity4
the world health organization4
the viral genome and4
care and use of4
our data show that4
the identification of the4
were analyzed using the4
an infectious cdna clone4
the course of infection4
the presence of grl4
of rna viruses and4
the supplemental material for4
cell activation and differentiation4
unknown viral diversity in4
to t cell activation4
mrna bound to ribosomes4
the responsibility of the4
and tracheal wash fluid4
of the order nidovirales4
transmission to a reassortant4
coronaviruses shows potential for4
has been reported to4
than those of the4
the official views of4
close proximity to the4
subjects had igg against4
patients with severe covid4
had igg against the4
buffer was added to4
a significant upregulation of4
and replication of the4
end of the genome4
determine the role of4
in such a way4
some protection against sars4
using the following binary4
or mers virus in4
the expression of gene4
they are modified by4
cells were obtained from4
adaptation of an influenza4
of human respiratory syncytial4
trsv isolates from honeybees4
potential pandemic influenza viruses4
at and h postinfection4
in an animal model4
were detected in the4
content is solely the4
in the hn protein4
caused by a novel4
h ha h n4
be involved in the4
cells were washed once4
significant upregulation of cd4
for h n influenza4
infected c bl mefs4
with viral envelope glycoproteins4
is possible that the4
h n influenza infections4
compounds reportedly active against4
discovered coronavirus associated with4
that some of the4
in pbs containing fbs4
the loss of gp4
experiments with novel potential4
acute respiratory syndrome and4
perspective on the value4
us porcine epidemic diarrhea4
of respiratory disease in4
the existence of a4
prepared as previously described4
evolutionary model with gamma4
to better understand the4
veroe cells exposed to4
protein was detected in4
complete genome sequence of4
in the upper and4
the nature of the4
that the removal of4
histocompatibility complex class ii4
associated with severe acute4
blocked the infectivity and4
funded by hhs nih4
primer sequences are available4
is the probability of4
were collected at and4
from the plasma membrane4
it has also been4
viruses of the order4
of incubation at room4
residue of m protein4
with p values of4
confers respiratory droplet transmission4
in rpmi medium supplemented4
each of the four4
subjects than in unexposed4
the infectivity of sars4
the mechanism by which4
outbreak of severe acute4
the role of complement4
described in materials and4
of the viral reads4
of mbcs reactive to4
ha h n virus4
to work on influenza4
remains to be determined4
does not necessarily represent4
the integral membrane fraction4
deposited in genbank under4
is most closely related4
we demonstrate that sars4
b cell response to4
were cultured in dmem4
influenza a virus hemagglutinin4
related to t cell4
strategy to estimate unknown4
on the plasma membrane4
the use of the4
by the international committee4
of mhc class i4
of an influenza h4
to experiments with novel4
viral rna copy numbers4
gene expression in the4
views of the journal4
one of the two4
that overlapped with annotated4
for the activation of4
is important for the4
of the immune system4
strongly suggest that the4
number of years that4
for virus replication and4
is required for the4
a severe acute respiratory4
and peptide from h4
the molecular basis for4
have been reported in4
which has been shown4
ethical alternatives to experiments4
lysates were collected at4
and analyzed them by4
was obtained from the4
play a critical role4
clusters are depicted with4
were found in the4
with the opposing monomer4
of the virus in4
asymptomatic spread of sars4
n influenza a viruses4
response to infection with4
differences were observed in4
the changes in expression4
as a receptor for4
the de genes at4
support the hypothesis that4
associated with acute respiratory4
potential for human emergence4
that the m protein4
that the presence of4
epistemological perspective on the4
increased resistance to multiple4
by human parainfluenza virus4
in cell culture medium4
was added to each4
of the test compounds4
damage in the setting4
with regard to the4
influenza infections in humans4
cells infected with sars4
the viroporin domain is4
g for min to4
shows potential for human4
distress syndrome in humans4
the quality of the4
against the s protein4
onset of clinical signs4
a systematic review and4
pl and lps synthesis4
were used to generate4
the development of the4
peptide from h n4
avian influenza virus h4
infection in dromedary camels4
were normalized to the4
the nsp nsp junction4
the small rna locus4
rna copy numbers were4
the cell culture medium4
were extracted from the4
is likely that the4
infected with sinv at4
in genbank under accession4
standard errors of the4
collected from the same4
each well of a4
mice infected with the4
p x ko mice4
dual use research of4
alternatives to experiments with4
the cells were allowed4
the impact of the4
viral diversity in mammals4
myotis lucifugus skin fibroblasts4
respiratory droplet transmission to4
mouse model of lethal4
were performed as previously4
the care and use4
official views of the4
were also de at4
observed a significant reduction4
had low levels of4
cells were grown in4
the presence of trsv4
of the spike gene4
function studies for molecularbased4
patients with cryptococcal meningitis4
following infection with sars4
cov infectious cdna clone4
rna was harvested from4
sections were stained with4
pathogenic avian influenza virus4
were generated using the4
and the urokinase pathway4
with influenza a virus4
have contributed to the4
studies for molecularbased surveillance4
and the development of4
was recently shown to4
orf and e b4
molecularbased surveillance and pandemic4
we also thank the4
experiments involving pathogens with4
sequence of the mers4
for h at rt4
replication in the upper4
in unexposed subjects and4
cells as well as4
coronavirus associated with acute4
are not well understood4
cell surface heparan sulfate4
differed by a maximum4
at least one of4
sequences are available upon4
the aids research and4
red blood cells were4
c a and c4
in respiratory secretions and4
rna was purified from4
c bl j controls4
the evolution of the4
a better understanding of4
as a cytosolic pamp4
in the levels of4
cells were resuspended in4
be explained by the4
a mouse model of4
are listed in table4
the presence of viral4
transiently transfected into hek4
was performed using the4
with the to range4
j mice than in4
in the dimer interface4
on the ability of4
in the absence or4
respiratory distress syndrome in4
in the right panel4
in the ferret model4
for the care and4
the novelty of the4
viruses with pandemic potential4
of a community lai4
cells were fixed in4
h n genetic changes4
increased replication of mhv4
for the production of4
in a model of4
the result of a4
with other bee viruses4
that are involved in3
at g ml and3
highly susceptible to the3
for min before being3
the pkr protein levels3
are not essential for3
synthesis in escherichia coli3
adenovirus type early region3
of research on influenza3
mice were infected with3
in unexposed subjects that3
and incubated for min3
expressed in this article3
with the ph n3
the kingdom of saudi3
cell responses against h3
up to representatives from3
of the complement signaling3
targeting the boas gene3
to confirm that the3
gp in the golgi3
in at least one3
first nucleotides of the3
copy numbers were calculated3
cells were plated at3
the construction of an3
culture for viral isolation3
branches of the tree3
involving one or more3
was the most likely3
in conjunction with other3
in case of an3
in response to infection3
potent activity against sars3
were used as negative3
by centrifugation and stored3
treating the host response3
the presence of m3
for the replication of3
igg igg c ratios3
cells at an moi3
of bat rnase l3
used as negative controls3
to further investigate the3
infected with influenza virus3
were determined using the3
the members of a3
transmission of avian influenza3
immunized mice than in3
patients with severe acute3
the complete genome sequence3
the possible role of3
of convalescent plasma therapy3
and research funding pause3
levels of cytoplasmic ca3
the most likely cause3
the causative agent of3
of autopsy cases from3
of the recombinant virus3
of bacterial and viral3
upper as well as3
cause of the epidemic3
were not able to3
these data suggested that3
homogenized in ml of3
responses to virus infection3
veroe tmprss cells at3
using an agilent bioanalyzer3
a pneumonia outbreak associated3
region corresponding to the3
avian influenza h n3
comments on the manuscript3
the probability of a3
supernatants were harvested and3
of an rna virus3
cells and veroe tmprss3
a result of a3
proteins of unknown function3
disease in humans and3
in both cell types3
of the global rna3
of virions from the3
nsp and nsp of3
subunit of the s3
the evolutionary source of3
a common feature of3
that most of the3
in the lungs and3
the value of gain3
host immune response to3
dc in the ksa3
the number of reads3
similar to those observed3
that the driving force3
preparedness use of highly3
was collected with a3
no significant differences were3
we did not observe3
of the ko mice3
days after the onset3
is a hallmark of3
late endosomes before uncoating3
and said that they3
either nsp or nsp3
genes experiencing codon selection3
in the background of3
in a number of3
these findings suggest that3
in agreement with the3
lung lobes and lung3
amino acid sequence identity3
were the first confirmed3
and h n ha3
replaced with fresh medium3
sufficient to provide protection3
fatalities and fatality burden3
daily for clinical signs3
the replication of trsv3
of convalescent plasma to3
cells were then washed3
in the first step3
cross sections of double3
and stained with hematoxylin3
and mg ml streptomycin3
in golden syrian hamsters3
in vitro antiviral activity3
was also observed in3
are not required for3
of the influenza virus3
outbreak of middle east3
are consistent with the3
mouse model of influenza3
the university of washington3
thermal stability of m3
genes at hpi with3
and analyzed by wb3
shown in table s3
hpi were also de3
lg evolutionary model with3
on at least two3
with no close mycobacteriophage3
recombinant inbred mouse resource3
led to a global3
the viral genomic rna3
emission was collected with3
we observed that the3
tested how march affects3
morbidity and mortality in3
a high level of3
onward transmission from a3
in our data set3
small rna cloning and3
in ferrets infected with3
a maximum of snps3
the data representing the3
for pkr degradation during3
the increase in the3
and sequenced to confirm3
newcastle disease virus hemagglutinin3
transfected into hek et3
a useful tool for3
performed on a csh3
as in human cells3
the human immunodeficiency virus3
collected prior to january3
by the university of3
out of the er3
were analyzed for the3
was expressed with increasing3
a call for a3
animal infections in the3
we declare no competing3
expression of the self3
as tlr and tlr3
origins and evolution of3
studies are needed to3
junction is essential for3
unexposed subjects that could3
homology at the nucleotide3
university of washington virology3
mice at both time3
devoid of anticoagulant activity3
was detected with anti3
sequencing analysis of the3
in dmem supplemented with3
such a way as3
assays were performed to3
for to h at3
use committee of the3
a central role in3
humanized plasminogen mouse model3
infectivity and cytopathic effect3
was added at a3
the first amino acids3
required for virus replication3
pandemic h n virus3
added to the media3
and methods for details3
on vero e cells3
and then incubated for3
upregulated cd expression in3
the m protein of3
weeks after symptom onset3
the accidental laboratory escape3
and oropharyngeal swabs and3
plays a critical role3
the removal of glycans3
has not yet been3
mice infected with nl3
the interaction of the3
of rdrps and rts3
the probability that a3
between pl flux and3
sought to determine whether3
in virus titers in3
provided written informed consent3
at least one escape3
the march antiviral activity3
we carried out a3
is responsible for m3
at the bronx zoo3
to treating patients with3
during the evolution of3
the probability of occurrence3
into polarized intestinal epithelial3
article do not necessarily3
been deposited in the3
such as tlr and3
note that there are3
group of dsrna viruses3
respiratory syndrome coronavirus nsp3
united states and the3
and use committee of3
when veroe tmprss cells3
cloned into the same3
receptor binding domain of3
is required for pkr3
have inhibitory effects on3
porcine reproductive and respiratory3
airborne transmission of h3
used to generate a3
pc a and icpedv3
pattern recognition receptors and3
alignment map format and3
and there are no3
nsp was detected with3
were representative of the3
were performed to detect3
of the research enterprise3
in the viral genome3
funding pause on selected3
major branches of the3
infectious virus was rescued3
we set out to3
we have shown for3
was performed using a3
at hpi were also3
temperature for min before3
oropharyngeal swabs and tracheal3
in any of the3
veroe cells and veroe3
inactivated fbs before use3
coronavirus vaccine protects in3
as a tool for3
libraries were prepared using3
no close mycobacteriophage relatives3
oas protein expression in3
to and lions to3
tigers to and lions3
vero cells and peritoneal3
the elevation of ca3
for pkr mrna by3
significantly upregulated cd expression3
and hpai h n3
and virulence of an3
was associated with the3
of cd surface expression3
basal oas protein expression3
day period between may3
contained isolates obtained from3
the indicated time points3
single mutations in hn3
to the same extent3
large number of o3
were mock infected or3
in vaccine virus recommendation3
bone marrow dendritic cells3
laboratory escape of potential3
infected with to pfu3
and mg to obtain3
in the rdrp tree3
through the use of3
igg titers against the3
how march affects the3
as the expression of3
responses against h n3
the homologous a h3
were submitted to the3
were resuspended in a3
the sequences of the3
are required for events3
is a receptor for3
compared to b controls3
farms differed by a3
c bl primary peritoneal3
ko mice infected with3
samples were analyzed with3
by the loss of3
calculated by subtracting the3
despite the lack of3
study of autopsy cases3
stability of m pro3
molecular evolutionary genetics analysis3
ebola virus entry requires3
were immunized with combo3
those of the other3
adults and juveniles phlebotomized3
improving pandemic influenza risk3
potential pandemic pathogen research3
map format and samtools3
cells in the lung3
does not rely on3
of one of the3
reverse genetics system for3
with fetal calf serum3
modified vaccinia virus ankara3
differences among multiple groups3
novel furin cleavage site3
cells infected with sinv3
some have argued that3
h n and ph3
infections in the united3
in different cell types3
encode a cd mimic3
nsp and nsp suffices3
the ph n np3
the course of the3
of the majority of3
rotavirus infection in cultured3
of novel small rnas3
protein of human respiratory3
the affinity of the3
regions of the ksa3
and resuspended in ml3
to cell surface hs3
on oas but not3
with increasing amounts of3
is involved in the3
by grants from the3
a score of plus3
adoptive transfer of bmdcs3
we note that there3
p x receptor in3
human cases of avian3
the distribution of the3
probability of at least3
t cells were seeded3
for middle east respiratory3
of viral rna from3
after h of transfection3
of membrane phospholipid synthesis3
is essential for the3
titers against the s3
of the debate and3
ml min using the3
each group of ferrets3
at late time points3
our understanding of microbial3
of a modification on3
and xhoi sites of3
histopathology of the lungs3
cannot exclude the possibility3
of the wt mice3
host responses to virus3
myotis lucifugus embryonic fibroblasts3
cells treated with the3
has not been reported3
that deletion of the3
infection in cultured cells3
and mortality in balb3
infectious cdna clone was3
immune response to infection3
of fatty acid and3
and red blood cells3
outbreaks of the disease3
activation of bat rnase3
hiv activity of fimh3
clinical and immunological assessment3
of the viral spike3
reduced the number of3
were aligned to the3
in genes experiencing codon3
adapted rather than human3
in neutral buffered formalin3
views of the national3
transduction of vero cells3
confirmed human cases of3
before an escape occurs3
referred to as the3
animal experiments were approved3
cells stained in green3
nsp and nsp from3
the viral genome is3
confirm the specificity of3
lethal dose of sars3
infectious cdna of the3
the crystal structure of3
or its w a3
with the use of3
at a density of3
the branches of the3
with antibodies to pkr3
statistical analyses were performed3
we did not detect3
of the gp glycosylation3
m pro in the3
genes de at late3
have been due to3
a mixture of ketamine3
data have been deposited3
rnas during virus infection3
cells were incubated at3
the centers for disease3
mouse resource for mapping3
than in wt cells3
before the emergence of3
and sequence analysis of3
was expressed with march3
adult respiratory distress syndrome3
was added to all3
observed in the ko3
in part by the3
fatality burden for each3
has been proposed that3
presence and absence of3
a critical role for3
can be detected by3
min of incubation at3
in this article do3
of personal protective equipment3
of the er and3
role of complement in3
of the differentially expressed3
correlated with pl flux3
as a class pathogen3
upregulate cd surface expression3
was restricted to the3
of m pro in3
among the ph n3
were infected with piv3
stranded rnadependent protein kinase3
with sinv at an3
and rectal swabs were3
the first nucleotides of3
for each lab in3
were detected in both3
transmission from each case3
in each well of3
of genes of unknown3
upregulation of cd surface3
both niv and hev3
lyse at room temperature3
used to block the3
virus in ferrets and3
we confirmed that the3
a single dose of3
mortality in balb c3
in a previous report3
in cultured cells and3
geo accession number gse3
as shown in a3
posttranslational control of plsb3
release of viral rna3
systematic assembly of a3
of cd is a3
as described in materials3
viral isolates were sequenced3
of gp and gp3
were compared using the3
the pause on gain3
that can be used3
this result suggests that3
rna was isolated from3
of washington virology laboratory3
induced by rotavirus infection3
b and peptide from3
between h n and3
function deliberative process and3
loss of gp n3
and the role of3
as well as lower3
detected by confocal microscopy3
rectal and nasal swabs3
the membrane protein of3
in the formation of3
rates and empirical amino3
despite the fact that3
bl primary peritoneal macrophages3
distributed site rates and3
absence of complement signaling3
has previously been shown3
in human a cells3
the results obtained with3
function experiments with pathogens3
was analyzed using a3
interactions with the backbone3
to be affected by3
insensitive to periodate oxidation3
rnase l is dependent3
syndrome coronavirus infection in3
veroe and veroe tmprss3
israeli acute paralysis virus3
assay was conducted to3
the blood transfusion centre3
is present in the3
for many rna viruses3
for more than generations3
through the aids research3
that the host immune3
analysis was performed to3
vaccine virus recommendation and3
experiments that alter pathogens3
that is required for3
to be active against3
the increased doses of3
nsp nsp junction is3
ma infection activates the3
autopsy cases from singapore3
between p and p3
in a vacuum centrifuge3
on a csh c3
a high mortality rate3
from each of the3
virus and mycobacterium tuberculosis3
experiments were approved by3
the sequence alignment map3
min using the following3
pause on selected gain3
are depicted with a3
vaccines and antivirals are3
with the activation of3
observed in the tomograms3
oc s igg titers3
polarized intestinal epithelial cells3
of the host immune3
in the majority of3
old c bl mice3
candidate loci for putative3
containing the accidental laboratory3
an avian h n3
ebov entry into macrophages3
costs of the pause3
detected by northern blot3
letter to the editor3
tmprss cells at hpi3
cov or influenza virus3
as mild to marked3
an moi of pfu3
under accession numbers mt3
noncoding rna expression in3
any of the samples3
rectal swabs were collected3
design and synthesis of3
an equal volume of3
understanding of microbial pathogenesis3
samples from mice infected3
s and n proteins3
respiratory and fecal samples3
in c bl mice3
significantly higher in combo3
on ice for min3
for at least days3
in a murine model3
from mice infected with3
pneumonia outbreak associated with3
gene expression profiles in3
suggesting that it may3
is known that the3
plays an important role3
of ht sequencing coverage3
not provide sterilizing immunity3
inbred mouse resource for3
pkr mrna levels and3
higher than that seen3
we hypothesized that the3
of the structural proteins3
transmission of mers coronavirus3
virus entry requires the3
with virus replication in3
not required for entry3
national academy of sciences3
for the selected adhesins3
lungs of the p3
potential pandemic pathogen experiments3
to be differentially expressed3
sinv at an moi3
in terms of the3
to the best of3
of the n gene3
g of total rna3
type i interferon production3
did not provide sterilizing3
experiments with pathogens of3
the antigen and pbs3
culture medium was replaced3
and empirical amino acid3
to confirm the specificity3
assayed for pkr mrna3
were used for the3
data set s b3
viruses due to the3
from the blood transfusion3
sensitive to endo h3
the epidemic of respiratory3
apical surface of polarized3
used to determine the3
was cotransfected with g3
myotis velifer embryonic fibroblasts3
of the antigen presentation3
each cluster were selected3
deliberative process and research3
indicating that m protein3
cells were plated in3
mice than in c3
cells were infected at3
against invasive gas infection3
the presence and absence3
of these small rnas3
case fatality rate of3
protects in an aged3
m protein rather than3
the ko mice compared3
were cultured in the3
time to an escape3
we also observed increased3
lethal and sublethal doses3
movies s and s3
were consistently upregulated or3
class i fusion proteins3
this study represents the3
the lungs of virus3
sequences obtained from sars3
the middle east and3
of the e gene3
based on our previous3
and incorporation into virions3
in an rna virus3
lacking the p x3
the evolutionary provenance of3
viral rna into the3
a novel furin cleavage3
ca and mg to3
first immunoprecipitated with anti3
in the urokinase pathway3
of the orf ab3
cotransfected with g of3
detection and analysis of3
including microrna host genes3
the nsp nsp cleavage3
well plate h before3
at least in part3
at days and postinfection3
was conducted to assay3
small rnas such as3
provide protection against e3
outbreak associated with a3
had high levels of3
protein rather than m3
of small rna loci3
were differentially expressed during3
for the sequences of3
model of lethal disease3
the plates were incubated3
of cytokines and chemokines3
results are consistent with3
available in table s3
in ferret passage experiments3
and cloned into the3
mhv p and mhv3
alter pathogens with pandemic3
upregulation of cd is3
found to be differentially3
droplet transmission in ferrets3
conjunction with other bee3
most probably due to3
least one of the3
three times for min3
detect the accumulation of3
qs at g ml3
were lower than those3
community lai leads to3
dna was purified from3
were downloaded from the3
the h n strain3
infected with a lethal3
cells were stimulated with3
we found that a3
shows that addition of3
gene encodes a protein3
have been used to3
pandemic preparedness use of3
and viral titers were3
the research enterprise is3
the area of the3
were infected with the3
added to l of3
a diverse array of3
between may and october3
deletion of its trs3
exudative phase of dad3
of the virus and3
lab in the enterprise3
first time that the3
to the small rna3
group were euthanized at3
limited airborne transmission of3
using differential scanning fluorimetry3
expressed with increasing amounts3
contact with the opposing3
provide insight into the3
detected in nasal swabs3
was determined using the3
was used to block3
e in the supplemental3
an undetected or unreported3
be active against sars3
was detected in the3
appear to have been3
and cd t cells3
of trsv in the3
were allowed to lyse3
nsp junction is essential3
class of small rnas3
a new coronavirus of3
plate h before transfection3
in dmem containing heat3
compared to the wild3
to the dimer interface3
was performed by adding3
that the s protein3
length gp and gp3
with the antigen and3
for the purpose of3
the amino acid level3
important role in the3
similar to those in3
were immunized with pfu3
the yakult central institute3
the structure of the3
the apical surface of3
during the nrc symposium3
ph n np pool3
and influenza virus infection3
regulation of the antigen3
rna into the cell3
collected from h n3
are rarely used in3
data were normalized to3
of a number of3
the intermediate plasmid pbac3
washed once with pbs3
be detected in the3
and dominant negative mutants3
and l of the3
immunized with inactivated mers3
aivs among the ph3
ngs within the gp3
bat rnase l depends3
elapsed time to an3
and postinfection in the3
was due to a3
of the probability of3
closely related to the3
that the majority of3
absence of test compounds3
by pattern recognition receptors3
the formation of double3
the seasonal prevalence of3
cytokines and chemokines in3
activation and differentiation were3
a virus between ferrets3
p values of less3
could be detected in3
recently reported that the3
expressed as a percentage3
transcription and replication of3
pathogenesis of infectious diseases3
to nt in length3
data available in the3
the removal of n3
signal regulatory protein alpha3
pkr mrna by qpcr3
increased delivery of sitraf3
role in vaccine virus3
than that seen with3
on the apical surface3
were cloned by three3
with pfu mers ma3
chance of an escape3
cis and in trans3
influenza a virus between3
may be used to3
of infected mice were3
new coronavirus of probable3
were added to the3
is the set of3
in vero a cells3
to be important for3
codons that are rarely3
compared to the wt3
approved by the university3
site rates and empirical3
host response to viral3
times higher than the3
infection of a human3
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the time of infection3
infection is inhibited by3
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the presence of sars3
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probability of occurrence of3
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mm dipotassium phosphate buffer3
a novel human coronavirus3
for the detection of3
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tissues of the urogenital3
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acute respiratory syndrome cov3
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from an animal reservoir3
delivery of the m3
analysis of the same3
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results demonstrate that the3
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presence of various concentrations3
tissue culture infective doses3
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glycan cap and mld3
preparation of the manuscript3
the nsp viroporin domain3
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findings in human cells3
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the viruses and their3
m protein of sars3
the herpes simplex virus3
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pkr protein levels were3
mouse adenovirus type early3
transfer of bmdcs from3
to the sars coronavirus3
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assembly of the full3
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yakult central institute for3
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ninth report of the3
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prevalence of trsv in3
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immunization with combo alum3
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the staff of the3
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number of uniquely mapped3
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inhibited ev infection of3
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red infectious center assays3
mice lacking the p3
assessment of asymptomatic sars3
superscript ii reverse transcriptase3
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of mutations in nsp3
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broad antiviral activity by3
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empirical amino acid frequencies3
this project was funded3
multiplicity of infection of3
personal protective equipment and3
cases of avian influenza3
as in wt cells3
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the sensing of pathogen3
min before being harvested3
observed differential expression of3
the production of svsrnas3
that it is a3
were performed as described3
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of the purinergic receptor3
data collection and analysis3
a wide variety of3
pandemic influenza risk assessment3
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approved by the unc3
on the expression of3
of both host and3
of its trs and3