trigram

This is a table of type trigram and their frequencies. Use it to search & browse the list to learn more about your study carrel.

trigram	frequency
the presence of	250
a total of	209
as well as	201
in patients with	188
study was to	159
this study was	151
of this study	147
the aim of	144
the use of	142
in this study	133
the most common	129
the treatment of	127
in order to	119
of patients with	117
the prevalence of	113
according to the	109
to evaluate the	107
the number of	105
to determine the	103
were determined by	97
aim of this	93
of the patients	93
the detection of	89
due to the	86
one of the	85
found to be	80
in vitro activity	77
the majority of	76
were resistant to	75
was used to	73
microbiol infect doi	72
the incidence of	72
clin microbiol infect	72
was detected in	71
the present study	67
to assess the	66
respiratory syncytial virus	64
included in the	64
the results of	64
respiratory tract infections	64
was the most	64
for the treatment	63
were susceptible to	63
the in vitro	62
was found in	62
fever rs group	60
for the detection	60
was performed by	60
in the study	59
from patients with	58
the most frequent	58
for detection of	57
the development of	57
the risk of	56
to investigate the	56
was determined by	56
were included in	55
of the isolates	55
were isolated from	54
of the study	54
were found to	54
of resistance to	54
the effect of	53
were used to	53
lower respiratory tract	53
the diagnosis of	53
analysis of the	52
risk factors for	51
strains isolated from	51
the proportion of	50
based on the	50
patients with covid	50
intensive care unit	50
the role of	49
the identification of	49
at least one	49
was observed in	49
patients in the	49
in the treatment	49
been shown to	48
were found in	48
vitro activity of	48
the emergence of	48
the frequency of	48
the end of	47
the study period	47
there was no	46
clinical isolates of	46
was associated with	46
resistant staphylococcus aureus	46
respiratory tract infection	45
there is a	45
infections caused by	44
in our hospital	44
and in the	44
the study was	43
field gel electrophoresis	43
was to evaluate	42
the isolates were	42
was found to	42
of the strains	42
for the presence	42
all isolates were	42
associated with a	41
has been shown	41
was carried out	41
was defined as	41
were collected from	41
polymerase chain reaction	41
determined by the	40
none of the	40
compared to the	40
a and b	40
the sensitivity of	40
shown to be	40
according to nccls	40
was used for	39
in our study	39
were positive for	39
in terms of	39
the spread of	39
in the first	39
the need for	39
were tested for	39
the efficacy of	39
reduced susceptibility to	39
to study the	39
severe acute respiratory	38
sensitivity and specificity	38
is associated with	38
the management of	38
during the study	38
of the most	38
were detected in	37
isolates were identified	37
acute respiratory syndrome	36
the objective of	36
was to determine	36
in combination with	36
were obtained from	36
to be a	36
the importance of	35
most of the	35
was performed using	35
strains were isolated	35
there was a	34
in the presence	34
of patients were	34
part of the	34
the strains were	34
were the most	34
in the netherlands	34
was performed in	33
the rate of	33
aim of the	33
seems to be	33
hospitalized patients with	33
of them were	33
more than one	33
on the basis	32
the basis of	32
the absence of	32
the activity of	32
samples were collected	32
were treated with	32
patients with severe	32
the fact that	32
years of age	32
objective of this	31
of the disease	31
mic mg l	31
associated with the	31
admitted to the	31
patients admitted to	31
in the present	31
length of stay	31
morbidity and mortality	31
testing was performed	31
of clinical isolates	31
in the hospital	31
is the first	30
of respiratory viruses	30
the impact of	30
could not be	30
results of the	30
in of the	30
in addition to	30
to be the	30
clinical microbiology and	30
study was conducted	30
in the table	30
of mg l	30
were analysed by	30
the most important	30
the distribution of	29
was isolated from	29
changes in the	29
found in the	29
the most prevalent	29
of antibiotic resistance	29
in the non	29
a number of	29
in primary care	29
the species level	28
there were no	28
of our study	28
role in the	28
because of the	28
the united states	28
the control group	28
the purpose of	28
in comparison to	28
of infectious diseases	28
with respect to	28
of staphylococcus aureus	28
were identified as	28
were identified by	28
considered to be	28
susceptibility testing was	28
in both groups	28
sensitivity of the	28
by disk diffusion	28
presence of the	27
more likely to	27
strains of s	27
well as the	27
critically ill patients	27
compared with the	27
of the s	27
isolates were collected	27
s rrna gene	27
detected in the	27
we aimed to	27
were detected by	27
isolates were susceptible	27
differences in the	27
in the second	26
was performed on	26
this study is	26
been associated with	26
to the species	26
disk diffusion method	26
comprehensive molecular testing	26
positive and negative	26
were determined using	26
materials and methods	26
the time of	26
the most commonly	26
the fever rs	26
urinary tract infections	26
in contrast to	26
to describe the	26
mg l for	26
mg l and	26
at the end	25
total of patients	25
the last years	25
to compare the	25
increase in the	25
in case of	25
out of the	25
purpose of this	25
detection of the	25
the duration of	25
were performed using	25
we investigated the	25
agar dilution method	25
the mic of	25
the case of	25
the occurrence of	25
in hospitalized patients	25
in the same	25
is a novel	24
and soft tissue	24
has not been	24
involved in the	24
the performance of	24
complicated skin and	24
risk factor for	24
intensive care units	24
half of the	24
of the present	24
with or without	24
the level of	24
the percentage of	24
have been reported	24
with and without	24
for patients with	24
and mg l	24
are shown in	24
present study was	24
in the united	24
in of patients	24
skin and soft	24
of a new	23
of the cases	23
skin and skin	23
the patients were	23
were recovered from	23
likely to be	23
in the intervention	23
appears to be	23
of clostridium difficile	23
is the most	23
were observed in	23
was conducted in	23
mics were determined	23
study was performed	23
use of antibiotics	23
the most frequently	23
all of the	23
should be considered	23
activity of tigecycline	23
high prevalence of	23
evaluation of the	22
j o u	22
during the period	22
used for the	22
factors associated with	22
as compared to	22
in the last	22
significantly associated with	22
to nccls guidelines	22
this is the	22
was present in	22
as a result	22
o o f	22
for treatment of	22
related to the	22
respiratory syndrome coronavirus	22
the possibility of	22
r o o	22
p r o	22
the production of	22
n a l	22
infections due to	22
the ability to	22
the patients with	22
in recent years	22
were associated with	22
soft tissue infections	22
p r e	22
than in the	22
u r n	22
is an important	22
l p r	22
the onset of	22
were tested by	22
the ability of	22
r n a	22
o u r	22
were used for	22
at the same	22
in the community	22
a l p	22
microbiology and infection	22
detection of respiratory	21
material and methods	21
and specificity of	21
patients treated with	21
igg and igm	21
total number of	21
was confirmed by	21
of intravenous antibiotics	21
a combination of	21
are the most	21
mean age of	21
clinical characteristics of	21
were compared with	21
each of the	21
before and after	21
majority of the	21
data suggest that	21
associated with an	21
comparison of the	21
the epidemiology of	21
negative predictive value	21
the introduction of	21
a variety of	21
isolates were resistant	21
of novel coronavirus	21
were identified to	21
an increase in	21
one or more	21
is one of	21
the intervention group	21
at the time	21
patients with a	20
of the same	20
the other hand	20
samples were taken	20
on the other	20
with acute respiratory	20
in some cases	20
between the two	20
days after the	20
confirmed by the	20
clinical isolates were	20
the lack of	20
number of patients	20
compared with those	20
analyses were performed	20
to reduce the	20
decreased susceptibility to	20
in the case	20
was assessed by	20
was identified in	20
and confirmed by	20
in the control	20
of the infection	20
resistant to erythromycin	20
were confirmed by	20
during the first	20
patients infected with	20
may be an	20
of the world	20
isolated from the	20
analysis was performed	20
in comparison with	20
are associated with	20
be associated with	20
to antimicrobial agents	20
a patient with	19
presence of a	19
mic values were	19
interpreted according to	19
observed in the	19
and the other	19
log cfu ml	19
are needed to	19
with the same	19
were used as	19
performed according to	19
a period of	19
the course of	19
for at least	19
were screened for	19
was performed to	19
of the virus	19
was positive in	19
the rest of	19
the expression of	19
this work was	19
included in this	19
identification of the	19
total of clinical	19
skin structure infections	18
clinical isolates from	18
patients hospitalized with	18
was used as	18
the severity of	18
our study was	18
by using the	18
to mg l	18
of the total	18
it has been	18
urinary tract infection	18
detected in of	18
there is no	18
by agar dilution	18
the type of	18
dna was extracted	18
between january and	18
of these strains	18
of the following	18
the outcome of	18
results suggest that	18
the same time	18
of hospital stay	18
and skin structure	18
isolated from patients	18
associated with increased	18
to confirm the	18
all strains were	18
to that of	18
aim of our	18
patients had a	18
in all patients	17
two or more	17
was to assess	17
were taken from	17
the central laboratory	17
the mean age	17
specificity of the	17
all of them	17
in a single	17
mean duration of	17
to examine the	17
responsible for the	17
to identify the	17
the analysis of	17
infections in the	17
we found that	17
in of cases	17
with the exception	17
no significant differences	17
were performed by	17
used in the	17
shown in the	17
mic and mic	17
a result of	17
and treatment of	17
strains isolated in	17
the range of	17
and negative predictive	17
of these patients	17
were subjected to	17
study is to	17
high rate of	17
the general population	17
was higher than	17
a lack of	17
vitro activity against	17
can be used	17
a risk factor	17
may be a	17
the effectiveness of	17
all patients were	17
to analyse the	17
identification of a	17
has been reported	17
has been associated	17
the pathogenesis of	17
was detected by	17
the beginning of	17
the s rrna	17
blood samples were	17
led to a	17
positive blood cultures	17
have shown that	17
of which were	17
the susceptibility of	17
in the usa	17
samples from patients	17
correlation between the	17
proportion of patients	17
in the clinical	17
c and d	16
in which the	16
sequencing of the	16
understanding of the	16
were present in	16
of respiratory tract	16
strains were resistant	16
more than of	16
treatment of infections	16
antibiotic use in	16
the samples were	16
to be associated	16
large number of	16
a systematic review	16
is a new	16
a set of	16
was similar to	16
a range of	16
such as the	16
similar to that	16
resistant strains of	16
the origin of	16
a role in	16
systematic review and	16
in hong kong	16
minimum inhibitory concentration	16
isolates of s	16
were admitted to	16
were enrolled in	16
in the fever	16
known to be	16
to erythromycin and	16
adult patients with	16
from january to	16
diagnosis and treatment	16
the levels of	16
obtained from the	16
the most active	16
was extracted from	16
isolates were tested	16
in the us	16
of hospitalized patients	16
method according to	16
mic mic of	16
and piperacillin tazobactam	16
during the last	16
by pcr and	16
and interpreted according	16
detected by pcr	16
influenza a and	16
activity against most	16
prevention and control	16
per cent of	16
i and ii	16
higher than that	16
the exception of	16
be used to	16
see supplementary material	16
or type of	16
end of the	16
patients were included	16
parts of the	16
central nervous system	16
with a mic	16
of influenza a	16
the total number	16
a wide range	16
be explained by	16
in the literature	16
the combination of	16
antibiotic susceptibility testing	16
area under the	15
with a positive	15
depending on the	15
fangcang shelter hospitals	15
of at least	15
activity of the	15
due to a	15
is important to	15
mutations in the	15
identified to the	15
an in vitro	15
samples were obtained	15
was obtained from	15
the risk factors	15
was done by	15
in the absence	15
the correlation between	15
upper respiratory tract	15
in the management	15
important role in	15
as part of	15
for diagnosis of	15
the determination of	15
most of them	15
respiratory viral infections	15
results in the	15
to the hospital	15
the day of	15
mean age was	15
knowledge of the	15
no significant difference	15
antibiotics in the	15
shown to have	15
to the same	15
in the younger	15
by the central	15
be an effective	15
over the last	15
wide range of	15
a history of	15
region of the	15
to have a	15
viruses and bacteria	15
of the treatment	15
was to investigate	15
strains belonging to	15
similar to the	15
samples were positive	15
the intensive care	15
to detect the	15
the results were	15
respiratory viruses in	15
a series of	15
the resistance to	15
and respiratory syncytial	15
in vitro susceptibility	15
and duration of	15
from the same	15
was designed to	15
of resistance in	15
was resistant to	15
differences between the	15
of antibiotics in	15
for identification of	15
that of the	15
of isolates were	15
spectrum of activity	15
strains were susceptible	15
performed using the	15
strains were found	15
a major cause	15
of influenza virus	15
b and c	15
and the results	14
species level at	14
in our laboratory	14
of the pcr	14
a member of	14
we did not	14
the penetration of	14
obtained from patients	14
the source of	14
majority of patients	14
of patients in	14
respiratory virus infection	14
was tested by	14
in the uk	14
total of isolates	14
had a positive	14
significant differences in	14
was performed with	14
it is possible	14
were infected with	14
median age was	14
hospitalised patients with	14
strains were tested	14
and of the	14
in the analysis	14
infection control measures	14
in clinical samples	14
the patient was	14
data from the	14
the lowest mic	14
and to evaluate	14
a new class	14
respiratory viruses and	14
with at least	14
the accuracy of	14
in relation to	14
after the first	14
type of resistance	14
degree or type	14
were performed in	14
level at each	14
limit of detection	14
mg l of	14
new class of	14
is based on	14
broth microdilution panels	14
this study were	14
obstructive pulmonary disease	14
and for the	14
more frequently in	14
there has been	14
drug resistant strains	14
length of hospital	14
for respiratory viruses	14
influenza b virus	14
be the most	14
is responsible for	14
resistance to penicillin	14
patients who had	14
of cases of	14
among the isolates	14
broad spectrum of	14
to estimate the	14
review and meta	14
were isolated in	14
a prospective study	14
in the general	14
with those of	14
high level of	14
level of resistance	14
members of the	14
the test program	14
but not in	14
showed that the	14
an effective and	14
treatment of patients	14
detection of sars	14
in the european	14
broth microdilution method	14
mic of mg	14
were classified as	14
not associated with	14
from a patient	14
patients who were	14
world health organization	14
with an increased	14
negative predictive values	14
the association between	14
in association with	14
effect on the	14
shown in table	14
to our knowledge	14
a broad spectrum	13
iv q h	13
the relationship between	13
to be an	13
is a common	13
of transmission of	13
the potential to	13
as shown in	13
a large number	13
and pseudomonas aeruginosa	13
of the antibiotic	13
isolates from the	13
coli and klebsiella	13
belonging to the	13
the quality of	13
is a major	13
of these isolates	13
of the data	13
in the field	13
in the other	13
conflicts of interest	13
isolated from blood	13
analysis showed that	13
other respiratory viruses	13
out of patients	13
the difference in	13
by means of	13
common cause of	13
an important role	13
the influence of	13
determined using the	13
we performed a	13
were considered to	13
in clinical isolates	13
of coronavirus disease	13
bacterial infections in	13
onset of symptoms	13
as compared with	13
the interpretation of	13
and to compare	13
were more frequently	13
were examined for	13
activity against gram	13
did not differ	13
proved to be	13
for all the	13
these isolates were	13
a group of	13
retrospective cohort study	13
the transmission of	13
objective was to	13
be due to	13
is necessary to	13
we conducted a	13
in north america	13
broth microdilution methods	13
the agar dilution	13
were selected for	13
were more likely	13
resistance to erythromycin	13
viral load in	13
and identification of	13
with a mean	13
was supported by	13
used to assess	13
to lg ml	13
by the local	13
studies are needed	13
these strains were	13
the wild type	13
is due to	13
use of the	13
may lead to	13
prevalence of resistance	13
amoxicillin clavulanic acid	13
in healthy volunteers	13
study showed that	13
performed by the	13
rest of the	13
with resistance to	13
more frequently detected	13
strains with a	13
patients with sars	13
and after the	13
of the normal	13
in critically ill	13
of the patient	13
because of their	13
chronic obstructive pulmonary	13
from hospitals in	13
total of strains	13
staphylococcus aureus and	13
samples from the	13
we evaluated the	13
of pseudomonas aeruginosa	13
are known to	13
the addition of	13
no conflicts of	13
of the clinical	13
major cause of	13
the clinical and	13
evaluation of a	13
the younger age	13
the need to	13
broad spectrum activity	13
to penicillin and	13
a positive result	13
antibiotic resistance and	13
in all cases	13
have not been	13
frequently detected in	13
of the european	13
bactericidal activity of	13
for the diagnosis	13
to determine whether	13
mg q h	13
impact on the	13
emergence of resistance	13
to the presence	13
rna extraction and	12
for the first	12
we studied the	12
cases of covid	12
we determined the	12
presented data suggest	12
the vast majority	12
the evaluation of	12
hospitals in the	12
a mic of	12
the mics of	12
tract infections in	12
increasing number of	12
in one patient	12
the median age	12
strains regardless of	12
invasive fungal infections	12
in this group	12
mic of mcg	12
was shown to	12
were collected at	12
from clinical specimens	12
is consistent with	12
end of therapy	12
infectious diseases and	12
one hundred and	12
for the identification	12
of invasive fungal	12
of helicobacter pylori	12
was observed with	12
regardless of degree	12
data on the	12
the gold standard	12
therapeutic option against	12
of degree or	12
belonged to the	12
by using a	12
in both the	12
have been identified	12
in the older	12
escherichia coli and	12
suggest that tigecycline	12
were carried out	12
clinical and laboratory	12
vancomycin and teicoplanin	12
the period of	12
a cause of	12
were identified in	12
some of the	12
a rapid and	12
the sensitivity and	12
with novel coronavirus	12
were positive in	12
in the area	12
gene was detected	12
of antimicrobial agents	12
an outbreak of	12
of mcg ml	12
was isolated in	12
susceptible to vancomycin	12
in intensive care	12
acute respiratory tract	12
resistance to antibiotics	12
susceptibility to ciprofloxacin	12
effect of the	12
play a role	12
used to determine	12
tigecycline may be	12
were similar to	12
was to compare	12
sensitive and specific	12
in out of	12
were analysed using	12
that tigecycline may	12
in accordance with	12
collected from hospitals	12
potent expanded broad	12
prevalence of the	12
taken from the	12
positive blood culture	12
due to its	12
patients with and	12
of s rrna	12
the presented data	12
the increase in	12
antimicrobial susceptibility of	12
further studies are	12
in the previous	12
our study is	12
used to identify	12
of antimicrobial resistance	12
a single dose	12
by the agar	12
in a tertiary	12
higher in the	12
could be a	12
study is the	12
identified in the	12
be used for	12
were compared to	12
of macrolide resistance	12
resistant strains regardless	12
mechanisms of resistance	12
was significantly higher	12
the cost of	12
difference between the	12
member of a	12
pulsed field gel	12
in subjects with	12
prevalence of mrsa	12
the first time	12
is difficult to	12
the amount of	12
was well tolerated	12
were similar in	12
ill patients with	12
groups of patients	12
of mrsa isolates	12
well as in	12
present in the	12
expression of the	12
spectrum activity against	12
the selection of	12
expanded broad spectrum	12
duration of intravenous	12
admitted to hospital	12
more common in	12
signs and symptoms	12
be related to	12
transmission of the	12
with reduced susceptibility	12
use of a	12
the mean duration	12
admitted to our	11
resulted in a	11
prosthetic valve endocarditis	11
most frequently detected	11
can be found	11
the department of	11
role of the	11
had not been	11
activity was comparable	11
a retrospective cohort	11
and the presence	11
and management of	11
indicated that the	11
of infection and	11
and severity of	11
it is important	11
in our cohort	11
was approved by	11
determine the prevalence	11
in the majority	11
have been found	11
piperacillin tazobactam against	11
the two groups	11
on the day	11
detection of influenza	11
ranged from to	11
treatment of complicated	11
and the use	11
the cases of	11
tigecycline compared to	11
of tigecycline compared	11
and can be	11
of clinical microbiology	11
patients hospitalised in	11
be able to	11
g q h	11
the potential of	11
participating site and	11
randomized controlled trials	11
significant difference between	11
microdilution panels and	11
a case of	11
aerobic and anaerobic	11
of the population	11
reliable therapeutic option	11
randomized controlled trial	11
pcr and sequencing	11
nccls broth microdilution	11
the local laboratory	11
method was used	11
from the patients	11
all the strains	11
among patients with	11
identification and susceptibility	11
age of years	11
infection in patients	11
written informed consent	11
acute respiratory infections	11
staphylococcus aureus strains	11
antimicrobial activity of	11
the potential for	11
patients who received	11
to determine if	11
and the risk	11
been reported in	11
viral respiratory infections	11
was comparable to	11
of the first	11
effective and reliable	11
prospective cohort study	11
in the s	11
in clinical practice	11
centre for disease	11
the isolation of	11
the context of	11
a mean of	11
the clinical isolates	11
in hospitalised patients	11
extended spectrum beta	11
infection in the	11
mild to moderate	11
alone or in	11
program determined the	11
white blood cell	11
defined as the	11
in the different	11
strains resistant to	11
accuracy of the	11
logistic regression model	11
european centre for	11
positive strains were	11
difference in the	11
were collected in	11
was studied by	11
respect to the	11
in cases of	11
determined the in	11
was performed according	11
caused by the	11
panels and interpreted	11
which can be	11
and patients with	11
in the csf	11
were evaluated in	11
disease prevention and	11
class of antimicrobials	11
clinical and microbiological	11
of respiratory virus	11
were sensitive to	11
patients with moderate	11
at each participating	11
found in of	11
of mg kg	11
with a median	11
data were collected	11
interpretation of the	11
the disk diffusion	11
of patients who	11
and outcome of	11
and outcomes of	11
clinical features of	11
with the use	11
excellent activity against	11
of infections caused	11
of infected patients	11
were used in	11
patients with cap	11
of severe acute	11
site and confirmed	11
among the patients	11
of the three	11
of a large	11
than of the	11
may not be	11
the presence and	11
infections in children	11
of isolates of	11
are presented in	11
for disease prevention	11
any of the	11
patients with respiratory	11
filmarray respiratory panel	11
well as a	11
of patients infected	11
and reliable therapeutic	11
of choice for	11
sequence analysis of	11
were characterised by	11
patients were treated	11
the existence of	11
peptide deformylase inhibitor	11
test program determined	11
mrsa isolates were	11
in the group	11
each participating site	11
vast majority of	11
third generation cephalosporins	11
by broth microdilution	11
rapid detection of	11
differences were found	11
nlr and crp	11
results were obtained	11
was based on	11
low level of	11
and did not	11
younger age group	11
the mechanism of	11
of the two	11
mechanism of action	11
by polymerase chain	11
igm and igg	11
lg ml for	11
blood cultures were	10
the emergency department	10
is likely to	10
bacterial and viral	10
was higher in	10
the field of	10
antibiotic resistance in	10
have potent expanded	10
in the latter	10
of the other	10
is the main	10
the surface of	10
to have potent	10
of bacterial pathogens	10
highly active against	10
at least two	10
likely to have	10
were shown to	10
and in of	10
our results suggest	10
and risk factors	10
in the development	10
will be discussed	10
need to be	10
the group of	10
the patients who	10
were characterized by	10
been reported to	10
the first case	10
for infection control	10
statistically significant difference	10
the value of	10
the concentration of	10
and spread of	10
associated with high	10
were measured by	10
retrospective analysis of	10
risk factors and	10
most common pathogens	10
the antimicrobial susceptibility	10
to those of	10
recommended by the	10
but it is	10
being the most	10
the patients was	10
that there is	10
duration of treatment	10
and infectious diseases	10
in a patient	10
a prospective cohort	10
older age group	10
their ability to	10
enrolled in this	10
of public health	10
rates of resistance	10
based on a	10
in the past	10
was determined using	10
hospitalized with covid	10
the infectious diseases	10
of streptococcus pneumoniae	10
results of this	10
was admitted to	10
was due to	10
the older age	10
of the bacteria	10
in our country	10
time pcr assay	10
with a high	10
the probability of	10
animals and humans	10
found that the	10
of isolates with	10
of the six	10
significant difference in	10
of the pathogen	10
were determined in	10
of a rapid	10
determined by agar	10
were determined for	10
rna was extracted	10
a source of	10
on behalf of	10
and safety of	10
results indicate that	10
test for the	10
antibiotic consumption in	10
to patients with	10
who did not	10
patients with community	10
susceptible to penicillin	10
of patients and	10
a median of	10
approved by the	10
between october and	10
detection of novel	10
local laboratory using	10
patients diagnosed with	10
studies have shown	10
resistant to ampicillin	10
was used in	10
the aetiology of	10
four of the	10
in a university	10
obtained with the	10
a university hospital	10
of the test	10
or in combination	10
with a low	10
of the genes	10
affected by the	10
of in vitro	10
be considered as	10
admitted to a	10
explained by the	10
at risk of	10
determined by e	10
it may be	10
were negative for	10
the czech republic	10
can lead to	10
fragment length polymorphism	10
was determined in	10
resistant isolates were	10
mortality in patients	10
isolated in the	10
when compared with	10
a comparison of	10
in this area	10
the release of	10
were reported in	10
the two most	10
no statistically significant	10
less than of	10
to the icu	10
the prevalence and	10
was performed for	10
was not detected	10
the vitek system	10
needs to be	10
indicate that the	10
the limit of	10
led to the	10
a proportion of	10
the same period	10
it is also	10
isolates of e	10
order to detect	10
of infective endocarditis	10
in the future	10
we report the	10
time above mic	10
the isolates of	10
mg kg day	10
results were compared	10
a significant increase	10
moderate to severe	10
not detected in	10
been found in	10
as a cause	10
the last decade	10
with coronavirus disease	10
the overall incidence	10
tract infection in	10
and has been	10
acquired pneumonia in	10
collected from the	10
mediated isothermal amplification	10
informed consent was	10
after the end	10
the difference between	10
correlated with the	10
performance of the	10
study shows that	10
in a prospective	10
has been described	10
strains were identified	10
of the resistant	10
the age of	10
at mg l	10
genes were detected	10
in the context	10
isolates were also	10
this was a	10
clinical microbiology laboratories	10
age of the	10
end of infusion	10
assay for the	10
resistant to penicillin	10
were identified using	10
patients suffering from	10
performed in a	10
has also been	10
to develop a	10
were inhibited by	9
acute respiratory illness	9
dose of mg	9
appear to be	9
methicillin resistant staphylococcus	9
compared to amikacin	9
coagulase negative staphylococci	9
insights into the	9
site of infection	9
patients with fever	9
more frequent in	9
in children and	9
a mean age	9
the university hospital	9
all over the	9
of cases were	9
is related to	9
in staphylococcus aureus	9
in pregnant women	9
bacteroides fragilis group	9
in the number	9
determined according to	9
blood cultures and	9
in patients hospitalized	9
isolation of the	9
was obtained in	9
institutional review board	9
were applied to	9
in patients admitted	9
to establish the	9
to control the	9
in this case	9
between patients with	9
on agar plates	9
a better understanding	9
lowest mic mic	9
restriction fragment length	9
have been shown	9
contrast to the	9
at least in	9
patients with bacterial	9
in a population	9
in our experience	9
this study we	9
to penicillin g	9
resistance to the	9
the study of	9
patients with acute	9
virus in the	9
to the reference	9
respiratory viruses were	9
isolates from patients	9
the study population	9
characteristics of the	9
were performed with	9
in the detection	9
are more likely	9
in these patients	9
in vitro against	9
two of them	9
and lg ml	9
better understanding of	9
be considered in	9
isolates recovered from	9
this study showed	9
with the results	9
was observed between	9
in all three	9
assay for detection	9
and presence of	9
ranging from to	9
a high rate	9
and antimicrobial resistance	9
in only one	9
log cfu g	9
lg ml and	9
novel coronavirus in	9
statistical analyses were	9
most common pathogen	9
and streptococcus pneumoniae	9
into account the	9
had at least	9
a high level	9
of the samples	9
have been isolated	9
isolates with a	9
was significantly more	9
the results obtained	9
according to clsi	9
susceptibility tests were	9
to be positive	9
after the onset	9
in escherichia coli	9
are summarized in	9
weeks after the	9
automated surveillance system	9
the antimicrobial agents	9
median duration of	9
antibacterial activity of	9
were obtained in	9
first case of	9
all the isolates	9
serum samples were	9
the degree of	9
use in the	9
the extent of	9
the spectrum of	9
especially in the	9
the availability of	9
antibacterial activity against	9
tested positive for	9
vitro activity was	9
were submitted to	9
susceptibility to glycopeptides	9
has to be	9
the bactericidal activity	9
in the prevalence	9
for susceptibility to	9
were studied by	9
the filmarray respiratory	9
the susceptibility to	9
to characterize the	9
and mic values	9
imipenem and meropenem	9
acute respiratory infection	9
of the human	9
of resistance genes	9
of a novel	9
of infection control	9
in all the	9
study was approved	9
mic of the	9
extraction and amplification	9
is of particular	9
samples were tested	9
the dissemination of	9
it is likely	9
the evolution of	9
of the new	9
the implementation of	9
by use of	9
by pcr for	9
and may be	9
one of these	9
similar in both	9
during the hajj	9
and number of	9
years in the	9
due to their	9
from to mg	9
the specificity of	9
from to years	9
with that of	9
leading cause of	9
the strains isolated	9
is possible to	9
similar to those	9
with the highest	9
part of a	9
also resistant to	9
than that of	9
reduction in the	9
the total of	9
a tertiary care	9
in the range	9
used to detect	9
did not show	9
in a hospital	9
streptococcus pneumoniae and	9
with bacterial meningitis	9
to characterise the	9
pcr was positive	9
a collection of	9
from the community	9
may have been	9
of strains were	9
were performed on	9
findings suggest that	9
during the same	9
to a better	9
were compared using	9
not differ significantly	9
resistant streptococcus pneumoniae	9
group than in	9
were compared by	9
at room temperature	9
over a period	9
in most cases	9
in respiratory specimens	9
extracted from the	9
higher than in	9
was identified as	9
development of a	9
development of new	9
relationship between the	9
presence of an	9
molecular typing of	9
of the non	9
patients with suspected	9
all but one	9
upper respiratory specimens	9
antibiotic resistance genes	9
significantly higher in	9
volume of distribution	9
was identified by	9
we observed a	9
and clinical characteristics	9
study of the	9
and the clinical	9
the burden of	9
rna and dna	9
detection and identification	9
of cq hcq	9
taking into account	9
has been used	9
have no conflicts	9
were not detected	9
in vitro and	9
blood cell count	9
was evaluated in	9
divided into two	9
broad spectrum antimicrobial	9
in patients without	9
of the positive	9
the molecular epidemiology	9
to monitor the	9
recovered from the	9
resistance genes and	9
of this work	9
for this study	9
a subset of	9
multilocus sequence typing	9
we report a	9
community and hospital	9
a decrease in	9
to prevent the	9
from clinical samples	9
all of these	9
origin of the	9
s rrna genes	9
in the following	9
of mrsa strains	9
presented the lowest	9
the public health	9
was to develop	9
of viral respiratory	9
is not a	9
not able to	9
model was used	9
used to treat	9
amplification of the	9
we used a	9
at the beginning	9
pcr was performed	9
seemed to be	9
age was years	9
a teaching hospital	9
suggested that the	9
obtained from a	9
antimicrobial surveillance program	9
susceptibility was determined	9
closely related to	9
was significantly associated	9
on the clinical	9
resistant strains were	9
the detection and	9
and quinupristin dalfopristin	9
of adverse events	9
the authors declare	9
the hospital and	9
pregnant women with	9
test was used	9
was no significant	9
melting curve analysis	9
respiratory distress syndrome	9
expression levels of	9
the previous months	9
treatment of severe	9
distribution of the	9
to be more	9
by pfge and	9
data were analysed	9
resistance to macrolides	9
of resistance and	9
to intensive care	9
strains from the	9
the first report	9
mrsa strains were	9
viral infections in	9
significant differences between	9
and to determine	9
simultaneous detection of	9
of broad spectrum	9
was evaluated by	9
study was designed	9
resistance to antimicrobial	9
resistance to imipenem	9
were designed to	9
contributed to the	9
most frequently isolated	9
located in the	9
be caused by	9
studies have demonstrated	8
with lower respiratory	8
an internal control	8
was extracted by	8
it is necessary	8
pcr products were	8
be found in	8
resistance to ampicillin	8
by the nccls	8
of the manuscript	8
in the early	8
disruption of the	8
a high prevalence	8
as an important	8
all isolates of	8
patient in the	8
within the hospital	8
and the emergence	8
followed by the	8
the increase of	8
spectrum antimicrobial agents	8
results show that	8
antibiotic use and	8
of the method	8
the sentry antimicrobial	8
clinical success rates	8
its ability to	8
of respiratory infections	8
seg and sei	8
not statistically significant	8
pathogens responsible for	8
of urinary tract	8
between the presence	8
causative agent of	8
that it is	8
be attributed to	8
the coronavirus disease	8
with respiratory tract	8
characterized by a	8
in the emergency	8
as the reference	8
some of these	8
most commonly reported	8
for all isolates	8
tested for the	8
spread of the	8
microbiology and infectious	8
determined by a	8
found in all	8
was conducted to	8
resistance to vancomycin	8
were analysed in	8
of patients had	8
full manual surveillance	8
of therapy and	8
excluded from the	8
the usefulness of	8
was treated with	8
was considered as	8
of invasive aspergillosis	8
west nile virus	8
which is the	8
less likely to	8
group i and	8
of the epidemic	8
and of patients	8
appeared to be	8
found to have	8
been described in	8
that can be	8
with a higher	8
in the environment	8
were also tested	8
the specimens were	8
during the course	8
and that the	8
resistance was observed	8
antimicrobial agents against	8
source of infection	8
pools of samples	8
for a total	8
multiplex pcr assay	8
been found to	8
of all patients	8
and staphylococcus aureus	8
mg l were	8
a new peptide	8
minocycline and piperacillin	8
and in vitro	8
to vancomycin and	8
in our region	8
previous studies have	8
in an in	8
and the mic	8
efficacy and safety	8
of the studies	8
data were obtained	8
in the pathogenesis	8
a concentration of	8
number of isolates	8
of the viral	8
community acquired pneumonia	8
were collected throughout	8
was more frequently	8
clostridium difficile infection	8
are likely to	8
and klebsiella spp	8
of the novel	8
infections in patients	8
easy to perform	8
test and the	8
used for a	8
producing escherichia coli	8
to increase the	8
pcr for the	8
the same patient	8
was established by	8
followed by a	8
in our institution	8
in the year	8
point of view	8
from blood cultures	8
incidence of cdad	8
were tested using	8
older than years	8
the viral load	8
of infection in	8
isolates of c	8
information on the	8
the numbers of	8
positive predictive value	8
least one of	8
determination of the	8
for the determination	8
susceptibility to the	8
around the world	8
pcr detection of	8
to in group	8
at concentrations of	8
evolution of the	8
the in vivo	8
the mean time	8
a few days	8
if they were	8
of the outbreak	8
in the western	8
the novel coronavirus	8
of groups a	8
had a significant	8
comparison with the	8
were also resistant	8
high frequency of	8
level resistance to	8
and enterococcus spp	8
pneumococcal conjugate vaccine	8
in upper respiratory	8
in the blood	8
mic lg ml	8
efficacy of the	8
in each case	8
coli and k	8
the efficacy and	8
will be presented	8
a multiplex pcr	8
identified by standard	8
when compared to	8
of the results	8
isolated from clinical	8
appear to have	8
no differences were	8
small number of	8
improvement of the	8
a challenge for	8
influenza a virus	8
rapid diagnosis of	8
and antibiotic susceptibility	8
has been a	8
to the nccls	8
aureus was the	8
in infectious diseases	8
clinical course and	8
behalf of the	8
with the wild	8
in these strains	8
independently associated with	8
prior to the	8
in the patients	8
caused by a	8
a reduction in	8
extraction and rt	8
portion of the	8
consent was obtained	8
mssa and mrsa	8
patients with non	8
the middle ear	8
developed for the	8
in patients receiving	8
specimens from patients	8
two of the	8
of our hospital	8
in children with	8
strains belonged to	8
observed in patients	8
in streptococcus pneumoniae	8
samples were analysed	8
been identified in	8
and bacteria in	8
in a clinical	8
the appropriateness of	8
we decided to	8
higher risk of	8
the rates of	8
group a streptococci	8
n and v	8
plates were incubated	8
of these infections	8
seem to be	8
health care workers	8
have also been	8
soft tissue infection	8
were found with	8
used to calculate	8
cause for concern	8
this is a	8
and hours after	8
added to the	8
tests were performed	8
were exposed to	8
single dose of	8
duration of therapy	8
susceptibility testing of	8
together with the	8
activity against the	8
management of patients	8
regions of the	8
activity of nvp	8
virus infection in	8
new peptide deformylase	8
acute care hospitals	8
resistance was found	8
results showed that	8
considered as an	8
used as a	8
to account for	8
from the first	8
has become a	8
identified as c	8
strains of c	8
the mic for	8
associated with resistance	8
patients and methods	8
the frequency and	8
in diagnosis and	8
of the above	8
rapid identification of	8
in group i	8
carried out to	8
in older adults	8
area of the	8
regression was used	8
a novel coronavirus	8
influenza virus infection	8
exacerbation of chronic	8
it is a	8
identical to the	8
more potent than	8
which has been	8
to the study	8
response to the	8
all patients had	8
in immunocompromised patients	8
it was found	8
all strains of	8
and trimethoprim sulfamethoxazole	8
mics mg l	8
mic values for	8
in the period	8
sentry antimicrobial surveillance	8
the assay was	8
more common than	8
a tertiary hospital	8
of the university	8
respiratory virus infections	8
were selected from	8
would like to	8
the study were	8
a statistically significant	8
or resistance to	8
up to days	8
different regions of	8
of them had	8
work was supported	8
is likely that	8
of the drug	8
humans and animals	8
antimicrobial resistance in	8
respiratory specimens of	8
the double disk	8
and those with	8
similar to other	8
than that in	8
in adults with	8
an incidence of	8
infection due to	8
antibiotic therapy is	8
by the disk	8
influenced by the	8
respiratory infections in	8
risk of infection	8
detection of viral	8
of acute gastroenteritis	8
ability of the	8
to the french	8
toxins a and	8
data indicate that	8
sent to the	8
and igm antibodies	8
antibiotic resistance of	8
for more than	8
in the preceding	8
of antibiotic treatment	8
the start of	8
in vitro antimicrobial	8
tested by the	8
cases patient days	8
we sought to	8
an association between	8
in patients who	8
with the presence	8
for the period	8
for the management	8
cause of death	8
in healthy subjects	8
from blood culture	8
should be performed	8
blood agar plates	8
of isolation of	8
of critically ill	8
and hospital acquired	8
after exposure to	8
isolates were found	8
may play a	8
the first to	8
been demonstrated to	8
method for the	8
or greater than	8
in response to	8
was compared with	8
using broth microdilution	8
and tested for	8
those of the	8
continues to be	8
to this article	8
and of them	8
isolates belonged to	8
was reported in	8
a reduction of	8
against all strains	8
were tested against	8
requiring intensive care	8
of the children	8
were able to	8
mice treated with	7
carried out using	7
than most commonly	7
the loss of	7
nature of the	7
resistant to clindamycin	7
isolates of enterobacteriaceae	7
a major problem	7
were obtained by	7
compared with other	7
staphylococcus aureus is	7
was investigated by	7
chloroquine and hydroxychloroquine	7
isolates were recovered	7
on the surface	7
were diagnosed with	7
acute exacerbation of	7
are caused by	7
rate of the	7
more than two	7
defined daily doses	7
management of community	7
between march and	7
the reliability of	7
methods and results	7
mean age years	7
to the emergence	7
were divided into	7
intervention and control	7
studies showed that	7
patients in a	7
developed and validated	7
to the editor	7
initiation of therapy	7
of patients was	7
of genes encoding	7
overall incidence of	7
administration of the	7
the united kingdom	7
the effects of	7
to the high	7
collected from patients	7
was not associated	7
is used in	7
viruses and bacteraemia	7
suggest that the	7
be divided into	7
high risk of	7
months to years	7
a h n	7
used as the	7
compare it with	7
of mrsa in	7
in each of	7
was a significant	7
with the clinical	7
significant morbidity and	7
were significantly higher	7
at high risk	7
was made by	7
and from the	7
of healthcare workers	7
performed by using	7
regardless of the	7
to ampicillin and	7
of the pandemic	7
was tested on	7
specimens of infected	7
has been detected	7
option against both	7
clinical significance of	7
or respiratory symptoms	7
after days of	7
have to be	7
from the hospital	7
contamination of mps	7
table shows the	7
and infection control	7
success rates were	7
patients were enrolled	7
has been demonstrated	7
patients with viral	7
were tested in	7
from hospitalized patients	7
in diabetic patients	7
disease in the	7
higher rates of	7
of gastroenteritis in	7
a common cause	7
a retrospective study	7
was to analyse	7
a diagnosis of	7
with regard to	7
presented with a	7
the gene encoding	7
the characteristics of	7
in cap patients	7
positive for the	7
patients with nosocomial	7
defined as a	7
was found that	7
randomly assigned to	7
the induction of	7
pneumoniae and h	7
from more than	7
significantly more frequently	7
primary outcome was	7
to the identification	7
was the only	7
study were to	7
of a single	7
strains and the	7
in the elderly	7
with a negative	7
for the analysis	7
the rapid diagnosis	7
alternative to the	7
severity of the	7
the efficiency of	7
during this period	7
aimed to determine	7
among these isolates	7
the shortage of	7
selection of resistance	7
due to an	7
within the first	7
from to in	7
diagnosis of covid	7
determined by hplc	7
into two groups	7
location of the	7
east respiratory syndrome	7
minimal inhibitory concentrations	7
and sequencing of	7
was mg l	7
of stay in	7
by dna sequencing	7
blood and urine	7
the site of	7
duration of symptoms	7
of human metapneumovirus	7
mic values of	7
has the potential	7
the other two	7
significant increase in	7
detected in all	7
analysis of clinical	7
neonatal intensive care	7
agar plates containing	7
amplified by pcr	7
and validation of	7
be useful for	7
isolates obtained from	7
to imipenem and	7
study is that	7
in elderly patients	7
using the nccls	7
the antimicrobial resistance	7
time pcr assays	7
h auc mic	7
to ciprofloxacin and	7
of complicated skin	7
hospitalised in the	7
and by the	7
of the assay	7
bacteria and viruses	7
penicillin g and	7
of this new	7
strains have been	7
increased likelihood of	7
shown in figure	7
in some countries	7
resistant to all	7
high number of	7
study was the	7
the point of	7
antibiotic treatment and	7
this may be	7
are involved in	7
time of the	7
the study included	7
apache ii score	7
significant difference was	7
and on the	7
higher prevalence of	7
the patients had	7
prospective study in	7
common respiratory viruses	7
is needed to	7
presence or absence	7
and atypical pathogens	7
the establishment of	7
and patients were	7
was related to	7
responsible for community	7
were in the	7
novel coronavirus pneumonia	7
to test the	7
positive isolates were	7
concentrations of grn	7
in young adults	7
virus and bacteria	7
and h after	7
respiratory tract pathogens	7
isolates were studied	7
no difference in	7
to be determined	7
high resistance to	7
be responsible for	7
strains were selected	7
jejuni and c	7
the objectives of	7
the institutional review	7
at a concentration	7
not included in	7
group and the	7
of clinical samples	7
we observed that	7
of viral load	7
a single mg	7
in the laboratory	7
were as follows	7
the percentages of	7
isolates and the	7
resistance genes were	7
h after the	7
but did not	7
greater than most	7
evaluate the in	7
performed using a	7
according to standard	7
against strains of	7
viridans group streptococci	7
could be used	7
it should be	7
it is difficult	7
time pcr for	7
shows that the	7
of all isolates	7
most commonly prescribed	7
medical records of	7
the antibiotics tested	7
the european union	7
in patients of	7
were obtained at	7
isolates of the	7
viral and bacterial	7
all patients with	7
rapid detection and	7
take into account	7
increase in resistance	7
in the region	7
in univariate analysis	7
based on clinical	7
strains were also	7
were related to	7
detected by the	7
in all strains	7
not found in	7
patients with invasive	7
laboratory using broth	7
load in upper	7
blood culture isolates	7
at the first	7
after the beginning	7
reported to be	7
in the final	7
presented in table	7
accounted for of	7
pcr assays for	7
of chlamydia pneumoniae	7
the contribution of	7
to be able	7
from each patient	7
the first hours	7
groups according to	7
for the study	7
vancomycin for the	7
faecal samples of	7
negative anaerobic bacteria	7
was no difference	7
mg iv q	7
infection in children	7
were excluded from	7
that did not	7
testing for respiratory	7
age of patients	7
methicillinresistant staphylococcus aureus	7
used in this	7
evaluate the impact	7
of strains with	7
identified as the	7
diagnosis and management	7
one of them	7
v and v	7
was responsible for	7
to find out	7
activity in vitro	7
of cases and	7
during the outbreak	7
cases and controls	7
the respiratory viruses	7
participated in the	7
compared to those	7
adults and children	7
gastric biopsy samples	7
features of patients	7
norfloxacin vitek mic	7
were not able	7
susceptibility to fluoroquinolones	7
infection control and	7
confirmed by pcr	7
toxic shock syndrome	7
common bacterial pathogens	7
patients hospitalized for	7
only one strain	7
order to prevent	7
coronavirus disease in	7
may have a	7
of penicillin g	7
most common cause	7
in the north	7
but also in	7
to identify patients	7
broad range of	7
the patients and	7
number of samples	7
at and mg	7
the prevention of	7
in women with	7
clinical and epidemiological	7
empiric treatment of	7
subjects received grn	7
of isolated strains	7
the resistance of	7
strains of the	7
similar to imipenem	7
order to assess	7
detected in a	7
in european countries	7
it is not	7
by the vitek	7
diagnostic accuracy of	7
from the clinical	7
mg l was	7
supplied broth microdilution	7
tested using the	7
prevention and treatment	7
and susceptibility testing	7
mcg ml against	7
isolates were from	7
data not shown	7
of bacterial infections	7
or absence of	7
antimicrobial susceptibility testing	7
may result in	7
the mortality of	7
patients with bronchiectasis	7
from patients in	7
incidence of mrsa	7
cost of hospitalization	7
varied from to	7
aortic heart valves	7
have been described	7
the high prevalence	7
rs group and	7
activity of levofloxacin	7
were collected by	7
with those obtained	7
patients with coronavirus	7
gram negative bacteria	7
this article can	7
was the predominant	7
summarized in the	7
using supplied broth	7
paediatric and adult	7
we wanted to	7
in phase i	7
the growth of	7
to calculate the	7
partial s rrna	7
release of il	7
and antibiotic resistance	7
significant differences were	7
comparison to the	7
and had a	7
chlamydia pneumoniae infection	7
pv and lukf	7
real time pcr	7
the composition of	7
up to in	7
at risk for	7
suggesting that the	7
for the rapid	7
beginning of the	7
resistant to vancomycin	7
exposed to the	7
in the diagnosis	7
our objective was	7
and easy to	7
of patients treated	7
with a significantly	7
pneumonia in wuhan	7
the consumption of	7
of respiratory syncytial	7
in plasma and	7
the resistant strains	7
from the study	7
were analysed for	7
of the hospital	7
by conventional methods	7
infected with novel	7
wide spectrum of	7
infectious diseases in	7
hts was performed	7
as the number	7
not significantly different	7
in cerebrospinal fluid	7
were transferred to	7
the first study	7
phenotypic and genotypic	7
resistance in s	7
as a potential	7
esbl and ampc	7
the current study	7
teaching hospital in	7
epidemiological and clinical	7
confirmed cases of	7
period of years	7
were no significant	7
of the studied	7
the binary toxin	7
of the rapid	7
in our collection	7
resistance in the	7
the patients in	7
were sent to	7
to all tested	7
an important factor	7
infections such as	7
methods were used	7
of group a	7
of the cfia	7
the first day	7
in vitro antibiotic	7