This is a table of type quadgram and their frequencies. Use it to search & browse the list to learn more about your study carrel.
quadgram | frequency |
---|---|
in the presence of | 152 |
on the other hand | 118 |
as well as the | 115 |
in the case of | 109 |
complete genome sequence of | 101 |
can be used to | 92 |
severe acute respiratory syndrome | 89 |
is one of the | 80 |
a large number of | 79 |
one of the most | 71 |
of hepatitis c virus | 68 |
for the development of | 63 |
d graphical representation of | 62 |
the structure of the | 60 |
on the basis of | 60 |
an important role in | 59 |
in the present study | 58 |
in the absence of | 58 |
was found to be | 55 |
genome sequence of the | 54 |
a wide range of | 53 |
were found to be | 52 |
of the human genome | 52 |
has been shown to | 50 |
the presence of a | 50 |
the amino acid sequence | 49 |
representation of protein sequences | 48 |
the length of the | 45 |
the sequence of the | 44 |
it is possible to | 44 |
on the surface of | 44 |
similar to that of | 44 |
graphical representation of protein | 43 |
solid phase peptide synthesis | 43 |
representation of dna sequences | 42 |
graphical representation of dna | 42 |
the size of the | 42 |
can be used for | 41 |
is the number of | 41 |
the presence of the | 40 |
in the development of | 40 |
it has been shown | 40 |
the end of the | 39 |
at the same time | 39 |
for each of the | 39 |
is based on the | 39 |
the number of sequences | 38 |
the genome sequence of | 38 |
draft genome sequence of | 38 |
in vitro and in | 37 |
been shown to be | 37 |
national center for biotechnology | 37 |
have been shown to | 36 |
to be involved in | 36 |
in addition to the | 35 |
play an important role | 35 |
the total number of | 35 |
as a result of | 35 |
genome sequence of a | 35 |
the nature of the | 34 |
vitro and in vivo | 34 |
can be found in | 34 |
nucleotide sequence of the | 34 |
the aim of this | 34 |
has been shown that | 33 |
the role of the | 33 |
with respect to the | 33 |
a member of the | 33 |
the rest of the | 33 |
amino acid sequence of | 33 |
at the end of | 32 |
work was supported by | 32 |
this work was supported | 32 |
protein sequences based on | 32 |
that can be used | 32 |
for the synthesis of | 32 |
center for biotechnology information | 32 |
acute respiratory syndrome coronavirus | 32 |
a key role in | 31 |
we were able to | 31 |
a wide variety of | 31 |
to that of the | 31 |
the national center for | 31 |
of this study was | 30 |
in this study we | 30 |
of the number of | 30 |
in the context of | 30 |
complete nucleotide sequence of | 29 |
play a role in | 29 |
the function of the | 29 |
it is important to | 29 |
this study was to | 29 |
to the development of | 29 |
of protein sequences based | 29 |
data with implanted signals | 28 |
the active site of | 28 |
for the design of | 28 |
plays an important role | 28 |
we have shown that | 28 |
the development of a | 27 |
the development of new | 27 |
as well as in | 27 |
amino acid sequences of | 27 |
the analysis of the | 27 |
for the first time | 27 |
in a variety of | 27 |
the sequences of the | 26 |
for the presence of | 26 |
for the treatment of | 26 |
it was found that | 26 |
complete genome sequences of | 26 |
the use of the | 26 |
in the human genome | 26 |
these results suggest that | 25 |
it was shown that | 25 |
the vast majority of | 25 |
for the detection of | 25 |
dna sequences based on | 25 |
to the number of | 25 |
identification of a novel | 24 |
the basis of the | 24 |
in contrast to the | 24 |
local alignment search tool | 24 |
the quality of the | 24 |
of severe acute respiratory | 24 |
of the viral genome | 24 |
has been used to | 24 |
of the amino acid | 24 |
in the range of | 24 |
in the regulation of | 24 |
basic local alignment search | 24 |
middle east respiratory syndrome | 23 |
have shown that the | 23 |
as well as a | 23 |
results suggest that the | 23 |
for the study of | 23 |
in the present work | 23 |
and the number of | 23 |
the case of the | 23 |
the formation of a | 23 |
in the form of | 23 |
in this work we | 23 |
that the number of | 22 |
the effect of the | 22 |
have been used to | 22 |
i i i i | 22 |
by the presence of | 22 |
the central nervous system | 22 |
in the process of | 22 |
it is possible that | 22 |
properties of amino acids | 22 |
as a function of | 22 |
in the formation of | 22 |
our results show that | 22 |
sequence analysis of the | 22 |
at the level of | 22 |
the secondary structure of | 22 |
is known to be | 21 |
as shown in figure | 21 |
a high degree of | 21 |
of dna sequences based | 21 |
the surface of the | 21 |
can be used as | 21 |
aim of this study | 21 |
it is necessary to | 21 |
is represented by a | 21 |
the accuracy of the | 21 |
the crystal structure of | 21 |
for the identification of | 21 |
are known to be | 21 |
the genome of the | 21 |
the human genome project | 21 |
in the number of | 21 |
studies have shown that | 21 |
the biological activity of | 20 |
a broad range of | 20 |
can be considered as | 20 |
it is known that | 20 |
the beginning of the | 20 |
the complete genome sequence | 20 |
the distribution of the | 20 |
is a member of | 20 |
of amino acid residues | 20 |
important role in the | 20 |
the results of the | 20 |
in order to investigate | 19 |
used in this study | 19 |
can be divided into | 19 |
should be noted that | 19 |
it should be noted | 19 |
in each of the | 19 |
one of the major | 19 |
the phylogenetic tree of | 19 |
in the design of | 19 |
could be used to | 19 |
for the analysis of | 19 |
we have developed a | 19 |
the interaction of the | 19 |
sequence of a novel | 19 |
characterization of a novel | 19 |
with the exception of | 19 |
the formation of the | 19 |
in the treatment of | 19 |
are involved in the | 19 |
human immunodeficiency virus type | 18 |
have been developed to | 18 |
of a variety of | 18 |
was used as a | 18 |
analysis of dna sequences | 18 |
the fact that the | 18 |
a new method for | 18 |
in the evolution of | 18 |
is involved in the | 18 |
the protein data bank | 18 |
to the formation of | 18 |
on the number of | 18 |
the development of fip | 18 |
were shown to be | 18 |
world data with implanted | 18 |
the location of the | 18 |
as shown in fig | 18 |
grid search over hyperparameters | 18 |
this is the first | 18 |
of protein sequences and | 18 |
of dna sequences and | 18 |
in order to study | 18 |
here we report the | 18 |
the importance of the | 18 |
the synthesis of a | 18 |
be used as a | 18 |
to better understand the | 18 |
a crucial role in | 17 |
a new generation of | 17 |
we have studied the | 17 |
on the use of | 17 |
our results suggest that | 17 |
the development of the | 17 |
as compared to the | 17 |
we have found that | 17 |
was carried out by | 17 |
of the most important | 17 |
have been identified in | 17 |
in the united states | 17 |
be found in the | 17 |
a d graphical representation | 17 |
east respiratory syndrome coronavirus | 17 |
secondary structure of the | 17 |
in order to understand | 17 |
as shown in table | 17 |
in a number of | 17 |
structure and function of | 17 |
is consistent with the | 17 |
the purpose of this | 17 |
a small number of | 17 |
of modern hopfield networks | 17 |
the presence of an | 17 |
the standard genetic code | 17 |
of the sequences of | 17 |
at the time of | 17 |
these results indicate that | 17 |
acid sequence of the | 16 |
and its application to | 16 |
the present study was | 16 |
in the field of | 16 |
was shown to be | 16 |
is likely to be | 16 |
a pair of sequences | 16 |
each of the four | 16 |
of dna primary sequences | 16 |
the complete nucleotide sequence | 16 |
be involved in the | 16 |
and the presence of | 16 |
we have investigated the | 16 |
the position of the | 16 |
phylogenetic analysis of the | 16 |
of instances per bag | 16 |
we found that the | 16 |
de novo assembly of | 16 |
the evolution of the | 16 |
results show that the | 16 |
in section a we | 16 |
on the presence of | 16 |
our understanding of the | 16 |
to the presence of | 16 |
for the production of | 16 |
s s and s | 16 |
in the central nervous | 16 |
is shown in figure | 16 |
x and y chromosomes | 16 |
little is known about | 16 |
s and s s | 16 |
in order to find | 16 |
in order to determine | 16 |
the amino acid sequences | 16 |
a limited number of | 15 |
amino acids in the | 15 |
the existence of a | 15 |
have been found to | 15 |
sequences based on the | 15 |
mechanism of action of | 15 |
the mechanism of action | 15 |
phylogenetic analysis based on | 15 |
can be applied to | 15 |
of a novel coronavirus | 15 |
can also be used | 15 |
identification and characterization of | 15 |
graphical representation of proteins | 15 |
number of instances per | 15 |
of similarity dissimilarity of | 15 |
in the active site | 15 |
plays a key role | 15 |
it is likely that | 15 |
the large number of | 15 |
using a combination of | 15 |
a role in the | 15 |
a better understanding of | 15 |
for the discovery of | 15 |
in the x chromosome | 15 |
we can see that | 15 |
representations of dna sequences | 15 |
a multiple sequence alignment | 15 |
have been developed for | 15 |
we are able to | 15 |
and evolution of the | 15 |
can be used in | 15 |
for the preparation of | 15 |
it has been proposed | 15 |
of a series of | 15 |
analysis of similarity dissimilarity | 15 |
the international committee on | 15 |
was found in the | 15 |
the identification of a | 14 |
sequences and its application | 14 |
the p signal sequence | 14 |
we would like to | 14 |
similar to those of | 14 |
of human immunodeficiency virus | 14 |
of intrinsic disorder in | 14 |
in terms of the | 14 |
have been found in | 14 |
at the molecular level | 14 |
in the analysis of | 14 |
of the active site | 14 |
of a set of | 14 |
active site of the | 14 |
search over hyperparameters with | 14 |
the first aug codon | 14 |
revealed the presence of | 14 |
the severe acute respiratory | 14 |
the design of new | 14 |
in order to identify | 14 |
the infl uence of | 14 |
committee on taxonomy of | 14 |
with reduction to specific | 14 |
is based on a | 14 |
the aim of the | 14 |
have the potential to | 14 |
is shown in fig | 14 |
immunosequencing data with implanted | 14 |
are shown in table | 14 |
are responsible for the | 14 |
graphical representations of dna | 14 |
we show that the | 14 |
in the identification of | 14 |
on taxonomy of viruses | 14 |
the a and b | 14 |
the nucleotide sequence of | 14 |
hyperparameters with reduction to | 14 |
over hyperparameters with reduction | 14 |
only a small fraction | 14 |
the lengths of the | 14 |
was carried out using | 13 |
avian infectious bronchitis virus | 13 |
that are involved in | 13 |
the efficiency of the | 13 |
the euclidean distance between | 13 |
of each of the | 13 |
are considered to be | 13 |
as one of the | 13 |
nucleotide and amino acid | 13 |
the use of a | 13 |
has been proposed that | 13 |
hepatitis c virus in | 13 |
that there is a | 13 |
for the purpose of | 13 |
are shown in fig | 13 |
the in silico sensitivity | 13 |
is thought to be | 13 |
a new family of | 13 |
is present in the | 13 |
peptides were synthesized by | 13 |
the conformation of the | 13 |
the stability of the | 13 |
the majority of the | 13 |
and characterization of a | 13 |
the performance of the | 13 |
the properties of the | 13 |
the present study we | 13 |
a major role in | 13 |
and the use of | 13 |
the hepatitis c virus | 13 |
the mechanism of the | 13 |
at the beginning of | 13 |
an increase in the | 13 |
of hrv and hev | 13 |
the causative agent of | 13 |
similar to each other | 13 |
are listed in table | 13 |
of a protein sequence | 13 |
presence or absence of | 13 |
could be used for | 13 |
the interaction between the | 13 |
the results indicate that | 13 |
in the genbank database | 13 |
international committee on taxonomy | 13 |
during the course of | 13 |
was supported by the | 13 |
in an effort to | 12 |
one of the three | 12 |
used to calculate the | 12 |
the amino acid residues | 12 |
the virus variation resource | 12 |
has been applied to | 12 |
is similar to that | 12 |
in the pathogenesis of | 12 |
in the area of | 12 |
the discovery of novel | 12 |
the application of the | 12 |
in order to obtain | 12 |
be used for the | 12 |
for the construction of | 12 |
are one of the | 12 |
as the number of | 12 |
it is not clear | 12 |
of the genetic code | 12 |
amino acid sequence and | 12 |
the goal of this | 12 |
are expected to be | 12 |
it is well known | 12 |
the molecular basis of | 12 |
the presence or absence | 12 |
the frequency of the | 12 |
different parts of the | 12 |
physicochemical properties of amino | 12 |
that the presence of | 12 |
with severe acute respiratory | 12 |
is considered to be | 12 |
a c p c | 12 |
to be important for | 12 |
different aspects of similarity | 12 |
the relationship between the | 12 |
the number of possible | 12 |
number of sequences in | 12 |
the results of this | 12 |
per primer or probe | 12 |
in the synthesis of | 12 |
the most widely used | 12 |
structure of the protein | 12 |
to one of the | 12 |
the number of unique | 12 |
the result of a | 12 |
as part of the | 12 |
of a number of | 12 |
the structure of a | 12 |
the authors declare that | 12 |
structure and solvent accessibility | 12 |
national institutes of health | 12 |
to be the most | 12 |
our results indicate that | 12 |
a broad spectrum of | 12 |
analysis based on the | 12 |
the expression of the | 12 |
of the s protein | 12 |
with the number of | 12 |
for the formation of | 12 |
the identifi cation of | 12 |
has not yet been | 12 |
a web server for | 12 |
a function of the | 12 |
given in table a | 12 |
results indicate that the | 12 |
the identification of the | 12 |
taking into account the | 12 |
better understanding of the | 12 |
play a key role | 12 |
comparative protein structure modeling | 12 |
a critical role in | 12 |
of the amino acids | 12 |
with that of the | 12 |
the strength of the | 12 |
order to understand the | 12 |
the molecular biology of | 11 |
is defined as the | 11 |
the choice of the | 11 |
are given in table | 11 |
in order to develop | 11 |
each sequence in the | 11 |
of intrinsically disordered proteins | 11 |
in agreement with the | 11 |
can be viewed as | 11 |
was added to the | 11 |
comparable to that of | 11 |
in the near future | 11 |
the set of all | 11 |
shed light on the | 11 |
of protein database search | 11 |
the interaction with the | 11 |
were obtained from the | 11 |
representation of dna sequence | 11 |
the root of the | 11 |
is related to the | 11 |
for the sequence of | 11 |
of sequences in the | 11 |
the production of a | 11 |
of the spike protein | 11 |
h n avian influenza | 11 |
comparative analysis of the | 11 |
the discovery of new | 11 |
a wide array of | 11 |
an example of a | 11 |
the information about the | 11 |
it has been suggested | 11 |
crystal structure of the | 11 |
the middle of the | 11 |
is dependent on the | 11 |
no conflict of interest | 11 |
a new approach to | 11 |
it is also possible | 11 |
of the protein sequence | 11 |
a large fraction of | 11 |
the human genome and | 11 |
new generation of protein | 11 |
we find that the | 11 |
of the present study | 11 |
are consistent with the | 11 |
of the sars coronavirus | 11 |
to determine whether the | 11 |
in the genomes of | 11 |
with the help of | 11 |
order to investigate the | 11 |
the number of clusters | 11 |
referred to as the | 11 |
sequence is represented by | 11 |
analysis of protein sequences | 11 |
to the synthesis of | 11 |
biological activity of the | 11 |
we conclude that the | 11 |
of the sequence of | 11 |
the structure and function | 11 |
results are consistent with | 11 |
is closely related to | 11 |
a small fraction of | 11 |
dissimilarity of dna sequences | 11 |
was used as the | 11 |
with high accuracy and | 11 |
with the use of | 11 |
gapped blast and psi | 11 |
orf a orf b | 11 |
here we present a | 11 |
number of occurrences of | 11 |
the sequences in the | 11 |
s s s s | 11 |
terminal region of the | 11 |
the sequence of a | 11 |
structure and dynamics of | 11 |
in the amino acid | 11 |
the effects of the | 11 |
as well as to | 11 |
a size of bp | 11 |
tissue and fecal samples | 11 |
one of the main | 11 |
method is based on | 11 |
may be related to | 11 |
used to determine the | 11 |
terminal part of the | 11 |
that they have no | 11 |
than that of the | 11 |
have been proposed to | 11 |
order to study the | 11 |
to be associated with | 11 |
foot and mouth disease | 11 |
is known about the | 11 |
be considered as a | 11 |
in the middle of | 11 |
the minimum number of | 11 |
plays a role in | 11 |
by the addition of | 11 |
similarity dissimilarity of dna | 11 |
generation of protein database | 11 |
the completion of the | 11 |
protein secondary structure and | 11 |
protein database search programs | 11 |
a powerful tool to | 11 |
with the aid of | 11 |
have been made to | 11 |
in the course of | 11 |
in the coding regions | 11 |
the synthesis of the | 11 |
for a long time | 11 |
protein sequences and its | 11 |
be responsible for the | 11 |
and their numerical characterization | 11 |
is interesting to note | 10 |
is also possible to | 10 |
was used for the | 10 |
the number of instances | 10 |
one of the first | 10 |
by emerson et al | 10 |
play an essential role | 10 |
by a variety of | 10 |
there is a need | 10 |
of each amino acid | 10 |
play important roles in | 10 |
used to compute the | 10 |
we have synthesized a | 10 |
in order to further | 10 |
this work is to | 10 |
with a variety of | 10 |
aim of this work | 10 |
affi nity for the | 10 |
be used to predict | 10 |
in the public domain | 10 |
to overcome this problem | 10 |
improve the accuracy of | 10 |
been found to be | 10 |
are based on the | 10 |
it is evident that | 10 |
declare that they have | 10 |
a result of the | 10 |
amino acid residues in | 10 |
h coding sequence of | 10 |
for a pair of | 10 |
when compared to the | 10 |
of the most common | 10 |
the evaluation of the | 10 |
is supported by the | 10 |
is identical to the | 10 |
the signal sequence of | 10 |
to be able to | 10 |
in an attempt to | 10 |
a part of the | 10 |
and nuclear magnetic resonance | 10 |
curl new delhi virus | 10 |
the activity of the | 10 |
in the same way | 10 |
tomato leaf curl new | 10 |
of one of the | 10 |
lengths of the sequences | 10 |
the determination of the | 10 |
of the target protein | 10 |
in the last decade | 10 |
of this study is | 10 |
as well as their | 10 |
the degree of similarity | 10 |
the solution structure of | 10 |
new d graphical representation | 10 |
of protein secondary structure | 10 |
with an average auc | 10 |
an average auc of | 10 |
a large set of | 10 |
under the control of | 10 |
for immune repertoire classification | 10 |
china complete genome sequence | 10 |
the changes in the | 10 |
leaf curl new delhi | 10 |
members of the family | 10 |
interesting to note that | 10 |
to be closely related | 10 |
and the development of | 10 |
may be involved in | 10 |
of the dna sequences | 10 |
from the analysis of | 10 |
a new member of | 10 |
it is interesting to | 10 |
of a protein is | 10 |
the next generation of | 10 |
epidemiology of novel coronavirus | 10 |
similarity dissimilarity analysis of | 10 |
of the hepatitis c | 10 |
led to the development | 10 |
of protein sequence and | 10 |
state of the art | 10 |
multiple sequence alignment with | 10 |
it is observed that | 10 |
based on physicochemical properties | 10 |
the center of the | 10 |
purpose of this study | 10 |
as can be seen | 10 |
the challenge stock virus | 10 |
as well as its | 10 |
have been used for | 10 |
by the fact that | 10 |
the construction of the | 10 |
the molecular mechanism of | 10 |
the results showed that | 10 |
of this work is | 10 |
this suggests that the | 10 |
if and only if | 10 |
we are interested in | 10 |
d structure of the | 10 |
been shown that the | 10 |
protein structure and function | 10 |
has the potential to | 10 |
one of the two | 10 |
to be responsible for | 10 |
in order to compare | 10 |
of the most abundant | 10 |
by solid phase peptide | 10 |
histone h coding sequence | 10 |
of the dna sequence | 10 |
the full hyperparameter search | 10 |
sequences based on a | 10 |
the deduced amino acid | 10 |
the hyperparameter search of | 10 |
from each of the | 10 |
for their ability to | 10 |
the coding regions of | 10 |
a significant role in | 10 |
sites of the ntp | 10 |
the evolutionary history of | 10 |
the host immune system | 9 |
proteins and nucleic acids | 9 |
with the aim to | 9 |
in the immune response | 9 |
infantile neuronal ceroid lipofuscinosis | 9 |
isolation and characterization of | 9 |
the result of the | 9 |
sequences and their numerical | 9 |
novel coronavirus associated with | 9 |
in the template structure | 9 |
for the binding of | 9 |
are associated with the | 9 |
here we present the | 9 |
was to investigate the | 9 |
has been demonstrated that | 9 |
start and stop codons | 9 |
the understanding of the | 9 |
that most of the | 9 |
of the influenza virus | 9 |
of the query sequence | 9 |
of the innate immune | 9 |
of the standard genetic | 9 |
protein secondary structure prediction | 9 |
in most of the | 9 |
in order to test | 9 |
to those of the | 9 |
play a crucial role | 9 |
the graphical representation of | 9 |
to the cell surface | 9 |
and function of the | 9 |
was carried out in | 9 |
with the aim of | 9 |
the binding of the | 9 |
has been suggested that | 9 |
the impact of the | 9 |
binding site of the | 9 |
to the identification of | 9 |
has been associated with | 9 |
will be discussed in | 9 |
is the use of | 9 |
with a length of | 9 |
and the ability to | 9 |
by a combination of | 9 |
study the effect of | 9 |
in the activation of | 9 |
of the presence of | 9 |
authors declare that they | 9 |
in comparison to the | 9 |
and epidemiology of novel | 9 |
it is difficult to | 9 |
sequence of the human | 9 |
of the genome of | 9 |
virus origins and receptor | 9 |
of the plasma membrane | 9 |
end of l oc | 9 |
which is based on | 9 |
by means of the | 9 |
as a consequence of | 9 |
is associated with the | 9 |
a limited set of | 9 |
of the university of | 9 |
the results show that | 9 |
the number of genes | 9 |
by polymerase chain reaction | 9 |
in the vicinity of | 9 |
are present in the | 9 |
associated with severe acute | 9 |
of peptides and proteins | 9 |
a simple way to | 9 |
is believed to be | 9 |
de novo design of | 9 |
of proteins based on | 9 |
a new class of | 9 |
was performed using the | 9 |
a novel coronavirus associated | 9 |
cannot be explained by | 9 |
the number of occurrences | 9 |
the source of the | 9 |
as a part of | 9 |
in the bat transcriptome | 9 |
the average number of | 9 |
be explained by the | 9 |
could be used as | 9 |
for each amino acid | 9 |
it has been demonstrated | 9 |
in the control of | 9 |
may play a role | 9 |
to the design of | 9 |
in this study were | 9 |
rna was isolated from | 9 |
would like to thank | 9 |
compared to the other | 9 |
we propose a new | 9 |
of semliki forest virus | 9 |
and can be used | 9 |
to be used as | 9 |
end of the mrna | 9 |
is characterized by a | 9 |
with the ability to | 9 |
of influenza a viruses | 9 |
based on a new | 9 |
the difference between the | 9 |
with a size of | 9 |
on the mechanism of | 9 |
the course of the | 9 |
the alignment of the | 9 |
the maximum number of | 9 |
is located in the | 9 |
is in agreement with | 9 |
relatively small number of | 9 |
in such a way | 9 |
it can be used | 9 |
coronavirus associated with severe | 9 |
for protein structure prediction | 9 |
more than of the | 9 |
as well as other | 9 |
the area under the | 9 |
of the complete genome | 9 |
for the existence of | 9 |
from a variety of | 9 |
of sequences with the | 9 |
the affinity of the | 9 |
in or more sequences | 9 |
have no competing interests | 9 |
is well known that | 9 |
that the majority of | 9 |
as a tool for | 9 |
the sensitivity of the | 9 |
design and synthesis of | 9 |
the four data sets | 9 |
the absence of the | 9 |
an increasing number of | 9 |
hepatitis c virus genotypes | 9 |
to a set of | 9 |
this is consistent with | 9 |
in a way that | 9 |
on the development of | 9 |
for the generation of | 9 |
study was to investigate | 9 |
of rna secondary structures | 9 |
are located in the | 9 |
the levenshtein distance between | 9 |
distribution of the dual | 9 |
other members of the | 9 |
the basis for the | 9 |
is responsible for the | 9 |
representation and numerical characterization | 9 |
of the fact that | 9 |
than the number of | 9 |
the primary structure of | 9 |
the structural and functional | 9 |
graphical representation has been | 9 |
construct the phylogenetic tree | 9 |
molecular evolutionary genetics analysis | 9 |
the d structure of | 9 |
structure of the n | 9 |
as a basis for | 9 |
is crucial for the | 9 |
amino acid sequence identity | 9 |
were identified in the | 9 |
the sum of the | 9 |
the results of our | 9 |
the mechanism by which | 9 |
as well as for | 9 |
have the ability to | 9 |
closely related to the | 9 |
is due to the | 9 |
origins and receptor binding | 9 |
the distance between the | 9 |
the innate immune system | 9 |
and amino acid sequence | 9 |
of the p protein | 9 |
the binding site of | 9 |
as a model system | 9 |
this means that the | 9 |
graphical representation and numerical | 9 |
of the structure of | 9 |
to test this hypothesis | 8 |
is widely used for | 8 |
the design of the | 8 |
in the input sequences | 8 |
in order to create | 8 |
it was observed that | 8 |
used to evaluate the | 8 |
between a pair of | 8 |
of the effect of | 8 |
on the identification of | 8 |
levenshtein distance between the | 8 |
has been reported in | 8 |
of the international committee | 8 |
be related to the | 8 |
of multiple sequence alignment | 8 |
to the production of | 8 |
investigated the effect of | 8 |
at the national center | 8 |
at the university of | 8 |
the s s sequence | 8 |
has been widely used | 8 |
the complexity of the | 8 |
is characterized by the | 8 |
have been isolated from | 8 |
infl uence on the | 8 |
is referred to as | 8 |
amino acid sequences and | 8 |
is essential for the | 8 |
search as well as | 8 |
the differences between the | 8 |
multiple sequence alignment of | 8 |
the national institutes of | 8 |
see ramsauer et al | 8 |
or only synonymous mutations | 8 |
value ranges are given | 8 |
model of sequence evolution | 8 |
when the number of | 8 |
the context of the | 8 |
the update rule of | 8 |
global initiative on sharing | 8 |
head and tail window | 8 |
the respective value ranges | 8 |
which are shown in | 8 |
alignment with high accuracy | 8 |
the template and target | 8 |
profile hidden markov models | 8 |
and biological activity of | 8 |
on the structure of | 8 |
amino acid sequence homology | 8 |
it has been reported | 8 |
at different time points | 8 |
is a powerful tool | 8 |
full hyperparameter search as | 8 |
like globin gene cluster | 8 |
update rule of modern | 8 |
hyperparameter search of the | 8 |
at the expense of | 8 |
were submitted to the | 8 |
have been carried out | 8 |
the head and tail | 8 |
of the signal sequence | 8 |
and some of them | 8 |
settings of the full | 8 |
all sequences in the | 8 |
on the level of | 8 |
play a significant role | 8 |
a variety of biological | 8 |
there are a number | 8 |
database and analysis resource | 8 |
it is believed that | 8 |
sequences were obtained from | 8 |
hopfield networks and attention | 8 |
prepared by solid phase | 8 |
in the genome of | 8 |
were tested for their | 8 |
the settings of the | 8 |
deduced amino acid sequences | 8 |
be present in the | 8 |
also referred to as | 8 |
cloning and characterization of | 8 |
was carried out to | 8 |
structure of the peptide | 8 |
is a measure of | 8 |
the biological function of | 8 |
in a range of | 8 |
role in the regulation | 8 |
the immune status of | 8 |
were prepared by solid | 8 |
of feline infectious peritonitis | 8 |
gives rise to a | 8 |
there has been a | 8 |
the best of our | 8 |
accuracy and high throughput | 8 |
are shown in figure | 8 |
a small proportion of | 8 |
of the aug codon | 8 |
in the phylogenetic tree | 8 |
previous studies have shown | 8 |
of a dna sequence | 8 |
that could be used | 8 |
can be attributed to | 8 |
of the genome sequence | 8 |
they have no competing | 8 |
our goal is to | 8 |
visual inspection of the | 8 |
the prediction of the | 8 |
can see that the | 8 |
of the virus in | 8 |
the introduction of the | 8 |
and numerical characterization of | 8 |
of alignment and phylogeny | 8 |
of the positive class | 8 |
of the viral rna | 8 |
is found in the | 8 |
analysis of dna sequence | 8 |
was found that the | 8 |
of the target sequence | 8 |
in the majority of | 8 |
with a view to | 8 |
order to determine the | 8 |
that they can be | 8 |
for virus origins and | 8 |
in the protein data | 8 |
that correspond to the | 8 |
may be used to | 8 |
sequence alignment with high | 8 |
results showed that the | 8 |
some of which are | 8 |
the characterization of the | 8 |
from the fact that | 8 |
to the wild type | 8 |
sequences in the database | 8 |
in order to increase | 8 |
high accuracy and high | 8 |
to interact with the | 8 |
patterns that can be | 8 |
plays a crucial role | 8 |
of the distribution of | 8 |
characterisation and epidemiology of | 8 |
the conformational behavior of | 8 |
defined in terms of | 8 |
amino acid side chains | 8 |
to the reference sequence | 8 |
is located at the | 8 |
to the best of | 8 |
a protein of amino | 8 |
in supplementary table s | 8 |
is shown in table | 8 |
appears to be a | 8 |
part of the protein | 8 |
to the active site | 8 |
as the respective value | 8 |
vascular endothelial growth factor | 8 |
are a number of | 8 |
proteins involved in the | 8 |
genomic characterisation and epidemiology | 8 |
the development of novel | 8 |
was found to have | 8 |
descriptors of dna sequences | 8 |
in the main paper | 8 |
used to study the | 8 |
histone h coding sequences | 8 |
is the length of | 8 |
by surface plasmon resonance | 8 |
on the cmv dataset | 8 |
b sites of the | 8 |
compared with that of | 8 |
the largest number of | 8 |
used in the hyperparameter | 8 |
were extracted from the | 8 |
protein of amino acids | 8 |
sequence alignment of the | 8 |
with the advent of | 8 |
also be used to | 8 |
our aim is to | 8 |
a set of sequences | 8 |
based on the use | 8 |
of the binding site | 8 |
is expected to be | 8 |
a query sequence and | 8 |
a given set of | 8 |
due to the high | 8 |
on the conformation of | 8 |
these data suggest that | 8 |
the utility of our | 8 |
of coronavirus spike proteins | 8 |
during the process of | 8 |
sequences with the highest | 8 |
in the construction of | 8 |
that the amino acid | 8 |
is part of a | 8 |
modern hopfield networks and | 8 |
by the use of | 8 |
both in vitro and | 8 |
a and b sites | 8 |
crucial role in the | 8 |
the composition of the | 8 |
on the nature of | 8 |
the same way as | 8 |
and in some cases | 8 |
considered to be a | 8 |
of this family of | 8 |
hyperparameter search as well | 8 |
in the hyperparameter search | 8 |
close to each other | 8 |
its interaction with the | 8 |
are presented in table | 8 |
insertions and deletions in | 8 |
l oc and l | 8 |
carried out in a | 8 |
of the s gene | 8 |
were observed in the | 8 |
it was proposed that | 8 |
to specific number of | 8 |
of emerging infectious diseases | 8 |
the world health organization | 8 |
can be classified into | 8 |
involved in the formation | 8 |
of the proteins of | 8 |
best of our knowledge | 8 |
of amino acid sequences | 8 |
of l oc is | 8 |
with the goal of | 8 |
are closely related to | 8 |
the standard amino acids | 8 |
the complete sequence of | 8 |
settings used in the | 8 |
the function of a | 8 |
without prior knowledge of | 8 |
in the auditory display | 8 |
an open reading frame | 8 |
by the formation of | 8 |
deduced amino acid sequence | 8 |
for the classification of | 8 |
be restricted to the | 8 |
where n is the | 8 |
shown to be a | 8 |
type ii cytoskeletal keratin | 8 |
similar results were obtained | 8 |
reduction to specific number | 8 |
the ability of the | 8 |
of the full hyperparameter | 8 |
compared to the wild | 8 |
of this type of | 8 |
it is essential to | 8 |
dna sequences and their | 8 |
in the production of | 8 |
members of the genus | 8 |
seems to be a | 8 |
an essential role in | 8 |
may be due to | 8 |
respective value ranges are | 8 |
to be essential for | 8 |
was based on the | 8 |
southern bean mosaic virus | 8 |
investigate the role of | 8 |
implications for virus origins | 8 |
has been identified as | 8 |
regions of the genome | 8 |
a new graphical representation | 8 |
be divided into two | 8 |
key role in the | 8 |
through the use of | 8 |
despite the fact that | 8 |
with the fact that | 8 |
members of this family | 8 |
to study the effect | 8 |
were carried out using | 8 |
been identified as the | 8 |
well as the respective | 8 |
for exon c ds | 8 |
amino acid changes in | 8 |
may play an important | 8 |
each of the two | 8 |
be used in the | 8 |
ranges are given in | 8 |
of this work was | 8 |
of genes and genomes | 8 |
estimation of alignment and | 8 |
for a variety of | 8 |
have been applied to | 8 |
number of sequences per | 8 |
the study of the | 8 |
involved in the regulation | 8 |
to investigate the role | 8 |
this part of the | 8 |
and molecular characterization of | 8 |
a large variety of | 8 |
bovine viral diarrhea virus | 7 |
sequence of the genome | 7 |
the bottom of the | 7 |
such a way that | 7 |
the limited number of | 7 |
present study was to | 7 |
with a large number | 7 |
most of the sequences | 7 |
of complete genome sequences | 7 |
crystal structure of a | 7 |
of the protein in | 7 |
expressed in escherichia coli | 7 |
in the last years | 7 |
the similarity analysis of | 7 |
as described in the | 7 |
the similarity between the | 7 |
the first step in | 7 |
mutational bias towards u | 7 |
that some of the | 7 |
analysis of the complete | 7 |
we report the synthesis | 7 |
proteins in order to | 7 |
a number of different | 7 |
the phylogenetic relationships of | 7 |
the dynamic nature of | 7 |
is an example of | 7 |
with the development of | 7 |
the utility of this | 7 |
the performance of our | 7 |
be part of the | 7 |
international nucleotide sequence database | 7 |
of amino acids are | 7 |
the phylogenetic analysis of | 7 |
primer and probe sequences | 7 |
molecular dynamics simulations of | 7 |
in our understanding of | 7 |
our results showed that | 7 |
a significant proportion of | 7 |
a novel method of | 7 |
were used for the | 7 |
vaccine for serogroup b | 7 |
member of the family | 7 |
as well as an | 7 |
is represented by the | 7 |
a molecular weight of | 7 |
mismatches per primer or | 7 |
and the characterization of | 7 |
play a major role | 7 |
large number of sequences | 7 |
about half of the | 7 |
in protein secondary structure | 7 |
the aug initiator codon | 7 |
for the s s | 7 |
in good agreement with | 7 |
a subset of the | 7 |
the aim of our | 7 |
understand the role of | 7 |
are found to be | 7 |
and the role of | 7 |
in the order of | 7 |
the random dna sequences | 7 |
with a number of | 7 |
in spite of the | 7 |
we have isolated a | 7 |
a comparison of the | 7 |
the sequence read archive | 7 |
the ratio of the | 7 |
this is due to | 7 |
be essential for the | 7 |
is the first report | 7 |
which leads to a | 7 |
nucleotide or amino acid | 7 |
we present the synthesis | 7 |
as the percentage of | 7 |
sequencing the human genome | 7 |
the number of available | 7 |
of incomplete purifying selection | 7 |
to the human genome | 7 |
the european molecular biology | 7 |
to the fact that | 7 |
amino acid substitution matrices | 7 |
dynamic representation of dna | 7 |
for a set of | 7 |
repetitive patterns in the | 7 |
analysis of the genome | 7 |
affi nity and selectivity | 7 |
which is the number | 7 |
the increase in the | 7 |
outperforms all other methods | 7 |
the amino acid composition | 7 |
has been proposed by | 7 |
the presence of viral | 7 |
as described in section | 7 |
utility of our approach | 7 |
and structural characterization of | 7 |
each of the three | 7 |
of the mechanism of | 7 |
the major portion of | 7 |
the nucleotide and amino | 7 |
the influence of the | 7 |
to the search for | 7 |
in the endoplasmic reticulum | 7 |
the high quality range | 7 |
of at least two | 7 |
to a lesser extent | 7 |
able to interact with | 7 |
are part of the | 7 |
the number of different | 7 |
the lack of a | 7 |
studies have revealed that | 7 |
the primary protein sequence | 7 |
increase in the number | 7 |
in line with the | 7 |
of the protein is | 7 |
of viral sequences in | 7 |
on sharing all influenza | 7 |
in one of the | 7 |
the functional properties of | 7 |
has been implicated in | 7 |
in terms of f | 7 |
the polymerase chain reaction | 7 |
of one or more | 7 |
of human influenza a | 7 |
and b sites of | 7 |
the state of the | 7 |
the shape of the | 7 |
genome sequence of mycobacterium | 7 |
the early stages of | 7 |
the number of non | 7 |
rest of the protein | 7 |
in the training set | 7 |
occurring in or more | 7 |
and characterization of the | 7 |
new insights into the | 7 |
an overview of the | 7 |
and relative solvent accessibility | 7 |
is composed of a | 7 |
structure of a protein | 7 |
synthesis and biological activity | 7 |
the international nucleotide sequence | 7 |
by a factor of | 7 |
is not possible to | 7 |
has proven to be | 7 |
a powerful tool for | 7 |
of a novel virus | 7 |
phylogenetic tree of the | 7 |
of gene expression in | 7 |
any of the other | 7 |
in the spike protein | 7 |
in combination with the | 7 |
was supported by grant | 7 |
is necessary for the | 7 |
be used to identify | 7 |
has been used for | 7 |
the structure and dynamics | 7 |
the x chromosome of | 7 |
it is clear that | 7 |
van rijn et al | 7 |
is very similar to | 7 |
of some of the | 7 |
sequences from the same | 7 |
we have previously shown | 7 |
amino acid identity with | 7 |
the absence of a | 7 |
and spike protein sequences | 7 |
bases in the sequence | 7 |
is independent of the | 7 |
can be explained by | 7 |
can be defined as | 7 |
to the lack of | 7 |
be viewed as a | 7 |
representation of proteins based | 7 |
is important for the | 7 |
an average length of | 7 |
confirmed the presence of | 7 |
to address this question | 7 |
that are responsible for | 7 |
markov chain monte carlo | 7 |
have been identifi ed | 7 |
in the previous section | 7 |
for the selection of | 7 |
has been found to | 7 |
on the secondary structure | 7 |
of a large number | 7 |
there has been an | 7 |
molecular characterization of a | 7 |
the relative abundance of | 7 |
region of the genome | 7 |
of amino acid sequence | 7 |
amino acid sequence is | 7 |
the traditional natural vector | 7 |
amino acids can be | 7 |
amino acid in the | 7 |
was chosen as the | 7 |
the first step of | 7 |
the origin of the | 7 |
the members of the | 7 |
of amino acids with | 7 |
is diffi cult to | 7 |
the side chain of | 7 |
vivo and in vitro | 7 |
amino acid composition of | 7 |
molecular evolution of the | 7 |
sequences that are under | 7 |
infl uence of the | 7 |
with one of the | 7 |
to solve this problem | 7 |
one of the important | 7 |
the core of the | 7 |
protein sequence and structure | 7 |
the effectiveness of the | 7 |
we have observed that | 7 |
the total amount of | 7 |
from a pool of | 7 |
phylogenetic tree based on | 7 |
we introduce a new | 7 |
in a large number | 7 |
higher than that of | 7 |
referred to as a | 7 |
we propose a novel | 7 |
to this end we | 7 |
of the dual nucleotides | 7 |
the last few years | 7 |
at least in the | 7 |
amino acid composition and | 7 |
a complete list of | 7 |
sequences that fold into | 7 |
the castv india anand | 7 |
protein sequences and their | 7 |
we focused on the | 7 |
were used in the | 7 |
sequences of size m | 7 |
the number of protein | 7 |
of a family of | 7 |
due to the fact | 7 |
in order to evaluate | 7 |
we designed and synthesized | 7 |
the same amino acid | 7 |
as well as by | 7 |
to the end of | 7 |
of protein structure prediction | 7 |
in vivo and in | 7 |
that of the native | 7 |
the peptides were synthesized | 7 |
of the creative commons | 7 |
a consequence of the | 7 |
aim of the present | 7 |
in the s protein | 7 |
have previously shown that | 7 |
that can be applied | 7 |
initiative on sharing all | 7 |
the generation of a | 7 |
assisted laser desorption ionization | 7 |
rule of modern hopfield | 7 |
in this paper we | 7 |
highly dependent on the | 7 |
into the active site | 7 |
of the challenge stock | 7 |
at position of the | 7 |
in the search for | 7 |
be closely related to | 7 |
of the wild type | 7 |
of the capsid gene | 7 |
to bind to the | 7 |
found to be the | 7 |
an understanding of the | 7 |
the real number of | 7 |
distributed under the terms | 7 |
the genome sequences of | 7 |
only one of the | 7 |
we also found that | 7 |
fl uorescent amino acids | 7 |
are required for the | 7 |
vary the number of | 7 |
the probability of a | 7 |
hepatitis c virus infection | 7 |
with a bci of | 7 |
is proportional to the | 7 |
an example of the | 7 |
new member of the | 7 |
it has been found | 7 |
and the structure of | 7 |
the enzymatic activity of | 7 |
the statistical significance of | 7 |
is a need for | 7 |
samples were collected from | 7 |
the basic local alignment | 7 |
for biological sequence comparison | 7 |
chemical properties of amino | 7 |
and s s sequences | 7 |
representation of dna primary | 7 |
be a consequence of | 7 |
the activity of a | 7 |
of the sequence is | 7 |
which is known to | 7 |
were able to identify | 7 |
has been reported that | 7 |
the level of the | 7 |
from patients with pneumonia | 7 |
was estimated to be | 7 |
the results of these | 7 |
by a number of | 7 |
it is composed of | 7 |
for a number of | 7 |
in the past few | 7 |
is used for the | 7 |
in terms of their | 7 |
the creative commons attribution | 7 |
in response to the | 7 |
will serve as a | 7 |
based on the sequences | 7 |
of the polypeptide chain | 7 |
we believe that the | 7 |
in the sequence of | 7 |
the ncbi taxonomy database | 7 |
spread of the virus | 7 |
one of which is | 7 |
the fact that they | 7 |
representation of protein sequence | 7 |
provide information about the | 7 |
and analysis of dna | 7 |
number of nonsynonymous mutations | 7 |
random variants of the | 7 |
the orf a orf | 7 |
prior knowledge of the | 7 |
that the use of | 7 |
hepatitis c virus rna | 7 |
to the study of | 7 |
have led to the | 7 |
a new d graphical | 7 |
is added to the | 7 |
has been studied by | 7 |
we showed that the | 7 |
at least of the | 7 |
the side chains of | 7 |
to show that the | 7 |
each of the datasets | 7 |
has a number of | 7 |
was used to determine | 7 |
the detection of the | 7 |
genome sequences of the | 7 |
of southern bean mosaic | 7 |
the morphology of the | 7 |
the dimension of the | 7 |
the activation of the | 7 |
the a a clade | 7 |
of the three families | 6 |
declare no conflict of | 6 |
to play an important | 6 |
of the intrinsically disordered | 6 |
of the lengths of | 6 |
of the orf a | 6 |
folding and stability of | 6 |
human influenza reveals the | 6 |
scale sequencing of human | 6 |
r d r r | 6 |
of amino acids and | 6 |
on the sequence of | 6 |
leads to the production | 6 |
in natural language processing | 6 |
not affected by the | 6 |
of some of these | 6 |
is known that the | 6 |
with those of other | 6 |
classifier on feature sets | 6 |
work is supported by | 6 |
root of the tree | 6 |
the clustal w alignment | 6 |
number of attention heads | 6 |
of the present work | 6 |
types of amino acids | 6 |
of human influenza reveals | 6 |
when compared with the | 6 |
at the nucleotide level | 6 |
from the perspective of | 6 |
length of the sequences | 6 |
sequences that do not | 6 |
the molecular mechanisms of | 6 |
towards the prediction of | 6 |
order to evaluate the | 6 |
as part of a | 6 |
between a query sequence | 6 |
a dynamic programming algorithm | 6 |
was observed in the | 6 |
the t cell receptor | 6 |
the adaptive immune system | 6 |
are in agreement with | 6 |
category simulated immunosequencing data | 6 |
next generation sequencing data | 6 |
the influenza virus resource | 6 |
the alignment with the | 6 |
with respect to a | 6 |
carried out in the | 6 |
only a small number | 6 |
inhibitors of this enzyme | 6 |
a maximum descent of | 6 |
for the investigation of | 6 |
of the phylogenetic tree | 6 |
in a dna sequence | 6 |
a small set of | 6 |
the start of the | 6 |
the modern hopfield network | 6 |
with the sequences of | 6 |
of biologically active peptides | 6 |
zucchini yellow mosaic virus | 6 |
the crystal structures of | 6 |
the regulation of the | 6 |
in the modulation of | 6 |
and the type of | 6 |
have been detected in | 6 |
binding domain of the | 6 |
the free energy of | 6 |
in accordance with the | 6 |
with an average of | 6 |
in a sequence of | 6 |
been found in the | 6 |
the magnitude of the | 6 |
is used as a | 6 |
will be compared to | 6 |
united states of america | 6 |
a starting point for | 6 |
the two sequences are | 6 |
the assembly of the | 6 |
for infectious disease diagnosis | 6 |
for a total of | 6 |
with blue indicating positive | 6 |
as well as from | 6 |
positive contribution and red | 6 |
porcine epidemic diarrhea virus | 6 |
the coding sequences of | 6 |
at a rate of | 6 |
sequence of escherichia coli | 6 |
in southern china complete | 6 |
we are investigating the | 6 |
of the sequences in | 6 |
we observed that the | 6 |
cloning and sequencing of | 6 |
variants of the viruses | 6 |
a new method to | 6 |
play a pivotal role | 6 |
for reconstructing phylogenetic trees | 6 |
of a novel human | 6 |
the number of the | 6 |
strongly dependent on the | 6 |
activity of the compounds | 6 |
measure the degree of | 6 |
the number of mismatches | 6 |
is treated as the | 6 |
are similar to each | 6 |
performance over cv folds | 6 |
of herpes simplex virus | 6 |
the similarity dissimilarity analysis | 6 |
hundreds of thousands of | 6 |
we demonstrate that the | 6 |
carried out by using | 6 |
is determined by the | 6 |
part of this work | 6 |
approaches have been developed | 6 |
with the results of | 6 |
that there is no | 6 |
nucleotide sequence database collaboration | 6 |
were synthesized by the | 6 |
the common ancestor of | 6 |
and analysis of the | 6 |
the authors declare no | 6 |
and approved the final | 6 |
invariant to permutations of | 6 |
secondary structure and relative | 6 |
blue indicating positive contribution | 6 |
to further understand the | 6 |
play a critical role | 6 |
not the case for | 6 |
proteins are involved in | 6 |
the national institute of | 6 |
a great variety of | 6 |
will be used to | 6 |
based on these observations | 6 |
development of a new | 6 |
to shed light on | 6 |
were included in the | 6 |
it may be possible | 6 |
the genetic diversity of | 6 |
are found in the | 6 |
are similar to those | 6 |
levels of viral rna | 6 |
a graphical representation of | 6 |
determined by the following | 6 |
the attention mechanism and | 6 |
word embedding substitution method | 6 |
of the h n | 6 |
it seems to be | 6 |
with the highest score | 6 |
have been described in | 6 |
by the following thresholds | 6 |
in response to a | 6 |
we will present the | 6 |
may be useful to | 6 |
but it is not | 6 |
and it can be | 6 |
these results are consistent | 6 |
our aim was to | 6 |
is given by the | 6 |
a number of studies | 6 |
are related to the | 6 |
and the lack of | 6 |
kyoto encyclopedia of genes | 6 |
sequences labeled by i | 6 |
with the presence of | 6 |
in infectious disease research | 6 |
the instances of e | 6 |
be the result of | 6 |
peptides derived from the | 6 |
but also in the | 6 |
a diverse range of | 6 |
leads to a premature | 6 |
of amino acid x | 6 |
characterization of protein sequences | 6 |
carried out using the | 6 |
is likely that the | 6 |
in the function of | 6 |
as a starting point | 6 |
are standard deviations across | 6 |
in this case the | 6 |
on the type of | 6 |
deeprc outperforms all other | 6 |
probabilistic data structures and | 6 |
total rna was extracted | 6 |
supported by grants from | 6 |
combined to the matrix | 6 |
l r d r | 6 |
being removed by d | 6 |
dynamic nature of viral | 6 |
average performance over cv | 6 |
found to be a | 6 |
it is apparent that | 6 |
in order to characterize | 6 |
a potent inhibitor of | 6 |
provide information on the | 6 |
contribution towards the prediction | 6 |
acid sequences of the | 6 |
with a high degree | 6 |
in some of the | 6 |
and sequence analysis of | 6 |
in the recognition of | 6 |
of the genomes of | 6 |
the hyperparameter and optimized | 6 |
methods are based on | 6 |
and the study of | 6 |
the average length of | 6 |
require the use of | 6 |
have found that the | 6 |
of common molecular subsequences | 6 |
involved in the immune | 6 |
the secondary structures of | 6 |
with probability of being | 6 |
we hypothesize that the | 6 |
structure of the enzyme | 6 |
a modern hopfield network | 6 |
of the protein structure | 6 |
or amino acid sequences | 6 |
will allow us to | 6 |
similarity analysis of dna | 6 |
d graphical representation for | 6 |
amino acid sequences were | 6 |
access article distributed under | 6 |
of the four bases | 6 |
mean number of differences | 6 |
protein coding genes in | 6 |
may be responsible for | 6 |
dependent on the presence | 6 |
present the synthesis of | 6 |
of the national center | 6 |
the tree of life | 6 |
the last two decades | 6 |
and compare it with | 6 |
query sequence and a | 6 |
structure and relative solvent | 6 |
and a set of | 6 |
of action of the | 6 |
the change in the | 6 |
study represents the first | 6 |
nature of viral genome | 6 |
were cloned into the | 6 |
are being used to | 6 |
sequence of length n | 6 |
have been able to | 6 |
could be detected by | 6 |
in order to ensure | 6 |
these data indicate that | 6 |
the rate at which | 6 |
to be used for | 6 |
in order to reach | 6 |
orf b and orf | 6 |
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gram feature extraction method | 6 |
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viruses that infect bacteria | 6 |
the role played by | 6 |
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size of bp and | 6 |
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sequencing of human influenza | 6 |
data set consists of | 6 |
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peptides were prepared by | 6 |
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the relative frequency of | 6 |
large number of instances | 6 |
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reported errors are standard | 6 |
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detailed description of the | 6 |
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mutation or only synonymous | 6 |
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of differences per sites | 6 |
high performance liquid chromatography | 6 |
of dna and protein | 6 |
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characters with probability of | 6 |
on the sequences encoding | 6 |
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dimensional graphical representation of | 6 |
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analysis revealed that the | 6 |
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comparative modeling and ligand | 6 |
the design of a | 6 |
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we do not consider | 6 |
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genome sequence of staphylococcus | 6 |
root mean square deviation | 6 |
on a molecular level | 6 |
ppca and its homolog | 6 |
detection and characterization of | 6 |
a premature stop codon | 6 |
in the history of | 6 |
reveals the dynamic nature | 6 |
evolutionary genetics analysis version | 6 |
the cost of the | 6 |
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immune receptor sequences and | 6 |
domain of the human | 6 |
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considered agents of bioterrorism | 6 |
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server for prediction of | 6 |
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a novel family of | 6 |
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approved the final manuscript | 6 |
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pseudo amino acid composition | 6 |
no mutation or only | 6 |
rest of the world | 6 |
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a novel class of | 6 |
identification of common molecular | 6 |
contribution and red indicating | 6 |
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sars cov main proteinase | 6 |
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the reported errors are | 6 |
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influenza reveals the dynamic | 6 |
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these results will be | 6 |
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be used to study | 6 |
assisted solid phase peptide | 6 |
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indicated the presence of | 6 |
structure of the standard | 6 |
beta globin protein sequences | 6 |
on the distribution of | 6 |
and amino acid sequences | 6 |
difference between the two | 6 |
in the database are | 6 |
are taken into account | 6 |
it is able to | 6 |
instances of e i | 6 |
at the frameshift site | 6 |
red indicating negative contribution | 6 |
of these peptides to | 6 |
the time of writing | 6 |
observed immune receptor sequences | 6 |
a general method applicable | 6 |
the most abundant common | 6 |
the conformational properties of | 6 |
the positive class repertoires | 6 |
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authors declare no conflict | 6 |
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method for reconstructing phylogenetic | 6 |
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hyperparameter and optimized by | 6 |
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based on the sequence | 6 |
genome sequence of pseudomonas | 6 |
of being removed by | 6 |
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southern china complete genome | 6 |
as an alternative to | 6 |
the l gene sequence | 6 |
been used for the | 6 |
new method for reconstructing | 6 |
indicating negative contribution towards | 6 |
as a first step | 6 |
other machine learning approaches | 6 |
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the number of nonsynonymous | 6 |
the appearance of the | 6 |
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sequences derived from the | 6 |
probability of being removed | 6 |
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of dna sequence structure | 6 |
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reference amino acid sequence | 6 |
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goal of this study | 6 |
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peste des petits ruminants | 6 |
of a novel astrovirus | 6 |
are thought to be | 6 |
of the sispa method | 6 |
parts of the genome | 6 |
article distributed under the | 6 |
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the relevance of the | 6 |
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for the similarity analysis | 6 |
vectors are combined to | 6 |
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simulated immunosequencing data with | 6 |
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we are currently investigating | 6 |
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the role of these | 6 |
based on the distribution | 6 |
invertebrate vectors of infectious | 6 |
the fas ii system | 6 |
thymus and pooled datasets | 6 |
genome sequence analysis of | 6 |
all of the information | 6 |
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of viral genome evolution | 6 |
errors are standard deviations | 6 |
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the start of orf | 6 |
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the number of trials | 6 |
respiratory syndrome coronavirus in | 6 |
vectors of infectious diseases | 6 |
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coding sequence of human | 6 |
by size exclusion chromatography | 6 |
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chromosomes of the human | 6 |
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subcellular localization of viral | 6 |
area under the roc | 6 |
sequence of the sars | 6 |
svm with minmax kernel | 6 |
we show here that | 6 |
by the amino acid | 6 |
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a tandem repeat sequence | 6 |
treated as the hyperparameter | 6 |
and sequencing of the | 6 |
of the secondary structure | 6 |
most recent common ancestor | 6 |
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amino acid identity and | 6 |
negative contribution towards the | 6 |
the total synthesis of | 6 |
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the binding affinity of | 6 |
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the number of nucleotides | 6 |
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identification of a new | 6 |
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leaf curl palampur virus | 6 |
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this indicates that the | 6 |
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vaccine and drug development | 6 |
the wild type protein | 6 |
to understand the role | 6 |
dna sequence based on | 6 |
on a validation set | 6 |
which belongs to the | 6 |
methods have been proposed | 6 |
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a pivotal role in | 6 |
localization of viral proteins | 6 |
and its relationship to | 6 |
forward and reverse primers | 6 |
we apply ig to | 6 |
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results demonstrate that the | 6 |
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secondary and tertiary structure | 5 |
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identified in our datasets | 5 |
codon usage bias and | 5 |
an increase of the | 5 |
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amino acid changes of | 5 |
a hidden markov model | 5 |
the human microbiome project | 5 |
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new coronavirus associated with | 5 |
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the number of false | 5 |
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potentials of mean force | 5 |
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that the structure of | 5 |
the standard energy model | 5 |
human islet amyloid polypeptide | 5 |
our study was to | 5 |
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differences between the two | 5 |
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shown in additional file | 5 |
the natural diversity of | 5 |
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a huge amount of | 5 |
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the template structure and | 5 |
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the d g mutation | 5 |
are of great interest | 5 |
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in vitro translation of | 5 |
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the absence of any | 5 |
expressed as the percentage | 5 |
complete nucleotide sequence and | 5 |
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the number of amino | 5 |
increases the number of | 5 |
the topology of the | 5 |
bp in the x | 5 |
each amino acid in | 5 |
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university of california san | 5 |
our understanding of viral | 5 |
experiments were carried out | 5 |
the structural features of | 5 |
this project is to | 5 |
of unique peptide words | 5 |
and their application to | 5 |
one of the few | 5 |
a relatively small number | 5 |
were downloaded from genbank | 5 |
in the activity of | 5 |
the s rrna gene | 5 |
the entire sequence space | 5 |
complete list of all | 5 |
the predictive performance of | 5 |
fcov zu and fcov | 5 |
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compare it with the | 5 |
a protein primary sequence | 5 |
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maximum of one mismatch | 5 |
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the search for similarities | 5 |
a measure of the | 5 |
a promising target for | 5 |
of structural and functional | 5 |
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poa i and v | 5 |
new world bat species | 5 |
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a molecular mass of | 5 |
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phase peptide synthesis method | 5 |
the spike protein of | 5 |
that it is a | 5 |
involved in this process | 5 |
human respiratory disease in | 5 |
convolutional neural network architectures | 5 |
labeled by i and | 5 |
and transmission electron microscopy | 5 |
the sequence with the | 5 |
a model based on | 5 |
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the role of a | 5 |
a maximum of one | 5 |
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an open access article | 5 |
nucleotide sequence of bacteriophage | 5 |
the conserved domain database | 5 |
a novel approach to | 5 |
sensitivity and specificity of | 5 |
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category a to c | 5 |
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represents one of the | 5 |
sequences that have been | 5 |
were visualized using gnuplot | 5 |
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of amino acids in | 5 |
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peptide synthesis in water | 5 |
these results demonstrate that | 5 |
dna sequence of the | 5 |
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secondary structure and solvent | 5 |
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the definition of the | 5 |
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we present a new | 5 |
the importance of this | 5 |
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solution structure of the | 5 |
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enzyme linked immunosorbent assay | 5 |
downloaded from the ncbi | 5 |
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groups of protein sequences | 5 |
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results will be discussed | 5 |
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have been identified as | 5 |
the amino acids of | 5 |
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time profiles of the | 5 |
activity of this enzyme | 5 |
application to coronavirus phylogeny | 5 |
sequences based on nucleotide | 5 |
acid sequence of two | 5 |
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it is generally accepted | 5 |
generation and analysis of | 5 |
this study we have | 5 |
the number of secondary | 5 |
support the hypothesis that | 5 |
analysis of gene expression | 5 |
the spread of the | 5 |
of the two sequences | 5 |
large numbers of sequences | 5 |
serotypes of hrv and | 5 |
and their statistical characterization | 5 |
the number of bi | 5 |
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the subcellular localization of | 5 |
than those of the | 5 |
a tree decomposition of | 5 |
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figures s and s | 5 |
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instances in the dataset | 5 |
the current state of | 5 |
data structures and algorithms | 5 |
sequences were identified in | 5 |
the catalytic activity of | 5 |
of an amino acid | 5 |
the significance of the | 5 |
described in this study | 5 |
have been successfully used | 5 |
according to the following | 5 |
under the joint model | 5 |
isolation of a novel | 5 |
can be subdivided into | 5 |
to the use of | 5 |
screening of respiratory tract | 5 |
we are studying the | 5 |
contigs assembled de novo | 5 |
is the most abundant | 5 |
primary amino acid sequence | 5 |
the design of novel | 5 |
the new transition kernel | 5 |
in the past years | 5 |
were also able to | 5 |
have been synthesized and | 5 |
a curated database of | 5 |
similarity dissimilarity vector is | 5 |
this study is to | 5 |
the first time in | 5 |
is another example of | 5 |
the high level of | 5 |
only in the presence | 5 |
is the most common | 5 |
the sars cov main | 5 |
in human immunodeficiency virus | 5 |
high degree of homology | 5 |
coronavirus genes and genomes | 5 |
of a given sequence | 5 |
amino acid residues that | 5 |
into the mechanism of | 5 |
its application to coronavirus | 5 |
multiple sequence alignment and | 5 |
by the immune system | 5 |
the relative importance of | 5 |
region of hepatitis c | 5 |
analysis showed that the | 5 |
or more sequences are | 5 |
the scientific community and | 5 |
the formation of an | 5 |
and its homolog proteins | 5 |
graphical representation and analysis | 5 |
is distinct from the | 5 |
real number of clusters | 5 |
carried out to determine | 5 |
was shown that the | 5 |
of unique structural folds | 5 |
on the synthesis of | 5 |
plays a critical role | 5 |
the differences between these | 5 |
a deletion that leads | 5 |
of the follow relationships | 5 |
this article can be | 5 |
a dna sequence is | 5 |
of dna sequence based | 5 |
ncbi virus variation resource | 5 |
we have identified a | 5 |
the region of the | 5 |
some of these peptides | 5 |
with unique aa sequences | 5 |
role in the development | 5 |
are as shown in | 5 |
for phylogenetic tree construction | 5 |
samples were positive for | 5 |
of a protein structure | 5 |
number of sequences for | 5 |
fl uorinated amino acids | 5 |
the sequence of human | 5 |
other viruses in the | 5 |
the occurrence of the | 5 |
as defined by the | 5 |
length of the sequence | 5 |
shows the results of | 5 |
geometric line adjacency matrix | 5 |
and spread of the | 5 |
major histocompatibility complex class | 5 |
for the creation of | 5 |
synthesized a series of | 5 |
to answer this question | 5 |
and lead to a | 5 |
at least as highly | 5 |
which could be used | 5 |
an extension of the | 5 |
the region between the | 5 |
used to assess the | 5 |
end of the sequence | 5 |
the last common ancestor | 5 |
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order to estimate the | 5 |
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