This is a table of named entities, their types, and their frequencies from sentences in your study carrel. Use it to search & browse the list to learn more about your study carrel. Please keep in mind that named-entity extraction is not as accurate as more generic parts-of-speech extraction. Unusual results will appear here.
| entity | type | frequency |
|---|---|---|
| rna | ORG | 241 |
| by-nc-nd | ORG | 215 |
| β | PERSON | 194 |
| ccn | ORG | 181 |
| adroit | PERSON | 108 |
| hbv | ORG | 104 |
| vntr | ORG | 101 |
| vae | ORG | 88 |
| regtools | PERSON | 81 |
| ensembl | PERSON | 66 |
| spike | ORG | 59 |
| οΏ½ | GPE | 53 |
| al. | GPE | 52 |
| gp130 | PERSON | 52 |
| c24 | GPE | 50 |
| k19 | ORG | 49 |
| j. | GPE | 49 |
| usa | GPE | 49 |
| t69 | ORG | 47 |
| pearson | PERSON | 47 |
| s. | GPE | 46 |
| il-6 | ORG | 45 |
| cpg | ORG | 45 |
| atac-doubletdetector | PERSON | 44 |
| pca | ORG | 43 |
| a. | GPE | 43 |
| hla | ORG | 41 |
| g. | PERSON | 41 |
| c. | GPE | 40 |
| sec | PERSON | 38 |
| gwas | ORG | 38 |
| au | ORG | 38 |
| ge | ORG | 36 |
| n | ORG | 36 |
| w25 | PERSON | 36 |
| umap | ORG | 35 |
| stat | ORG | 35 |
| nucleic acids research | ORG | 35 |
| gbpm | ORG | 35 |
| by-nc 4.0 international | ORG | 35 |
| atu | ORG | 35 |
| li | PERSON | 34 |
| deepvariant | ORG | 34 |
| wang | PERSON | 33 |
| sars-cov | ORG | 33 |
| q18 | ORG | 33 |
| eq | PERSON | 33 |
| balf | ORG | 32 |
| coi | ORG | 32 |
| germany | GPE | 32 |
| illumina | GPE | 32 |
| y. | PERSON | 31 |
| t. | PERSON | 31 |
| nsclc | ORG | 31 |
| h164 | PERSON | 31 |
| https://doi.org/10.1101/332965doi | PERSON | 30 |
| k. | PERSON | 30 |
| g68 | PERSON | 30 |
| chen | PERSON | 30 |
| phenix | PERSON | 29 |
| phmm | ORG | 29 |
| k11777 | PERSON | 29 |
| cpgs | ORG | 29 |
| bioinformatics | ORG | 28 |
| m. | GPE | 28 |
| ms | ORG | 28 |
| m70 | GPE | 27 |
| india | GPE | 27 |
| zhang | PERSON | 27 |
| snp | ORG | 27 |
| vp | ORG | 27 |
| biorxiv | ORG | 26 |
| pqa | ORG | 26 |
| iao | ORG | 26 |
| h. | GPE | 26 |
| france | GPE | 26 |
| china | GPE | 26 |
| jaccard | GPE | 26 |
| g165 | ORG | 25 |
| aupr | ORG | 25 |
| ancestralclust | ORG | 25 |
| c21 | ORG | 25 |
| simlr | ORG | 25 |
| klein | ORG | 25 |
| smith | ORG | 25 |
| π·23 | ORG | 25 |
| sr | ORG | 25 |
| uclust | ORG | 24 |
| l. | GPE | 24 |
| umi | ORG | 23 |
| mers-cov | ORG | 23 |
| lc-ms | LOC | 23 |
| eas | ORG | 23 |
| cnn | ORG | 23 |
| e. | PERSON | 22 |
| grn | ORG | 22 |
| g22 | GPE | 22 |
| nlp | ORG | 22 |
| n20 | GPE | 22 |
| nmi | ORG | 22 |
| xgboost | ORG | 21 |
| rt | PERSON | 21 |
| poland | GPE | 21 |
| ncbi | ORG | 21 |
| ccle | ORG | 21 |
| z. | GPE | 20 |
| sun | PERSON | 20 |
| srs | ORG | 20 |
| gof | ORG | 20 |
| cmaps | ORG | 19 |
| b. | GPE | 19 |
| pan cancer | PERSON | 19 |
| tofacitinib | GPE | 19 |
| uk | GPE | 19 |
| ucec | ORG | 18 |
| jak | ORG | 18 |
| xx | PERSON | 17 |
| south korea | GPE | 17 |
| pcr | ORG | 17 |
| italy | GPE | 17 |
| brazil | GPE | 17 |
| bold | ORG | 17 |
| a138 | ORG | 17 |
| d66 | GPE | 16 |
| j. et al | PERSON | 16 |
| louvain | GPE | 16 |
| ceres | ORG | 16 |
| blast | ORG | 16 |
| los angeles | GPE | 16 |
| h1299 | ORG | 16 |
| m. et al | PERSON | 16 |
| otu | ORG | 16 |
| zm(x | GPE | 16 |
| paad | ORG | 16 |
| stereoscope | PERSON | 16 |
| w188 g22 | GPE | 16 |
| new york | GPE | 16 |
| nat methods | PERSON | 15 |
| depmap | ORG | 15 |
| g67 | PERSON | 15 |
| i. | PERSON | 15 |
| netid | ORG | 15 |
| sweden | GPE | 15 |
| v. | GPE | 15 |
| vol | PERSON | 15 |
| vivo | GPE | 15 |
| proc natl | PERSON | 14 |
| auroc | ORG | 14 |
| genome biol | PERSON | 14 |
| lee | PERSON | 14 |
| nnls | ORG | 14 |
| p. | GPE | 14 |
| zebrafish | GPE | 14 |
| roc | GPE | 14 |
| rpgg | ORG | 14 |
| sars-cov-2 | ORG | 14 |
| tm | ORG | 14 |
| triplex motifs | PERSON | 14 |
| βm | ORG | 14 |
| pdb | ORG | 13 |
| abc-smc | ORG | 13 |
| ess | ORG | 13 |
| fnr | ORG | 13 |
| g67 g68 | PERSON | 13 |
| lvm | ORG | 13 |
| lung | PERSON | 13 |
| np | PERSON | 13 |
| ma | GPE | 13 |
| poisson | PERSON | 13 |
| python | ORG | 13 |
| vcf | ORG | 13 |
| x. | PERSON | 13 |
| cryptopain-1 | GPE | 13 |
| scdapars | ORG | 13 |
| sec | ORG | 13 |
| π·23 β π | ORG | 13 |
| galiez | PERSON | 12 |
| ii | ORG | 12 |
| ifn | ORG | 12 |
| hmdb | ORG | 12 |
| ccr-jacks | ORG | 12 |
| ehr | ORG | 12 |
| dunn | ORG | 12 |
| clique sum | PERSON | 12 |
| rmsd | ORG | 12 |
| mrc5 | ORG | 12 |
| mwas | ORG | 12 |
| sc | ORG | 12 |
| w. | PERSON | 12 |
| generalized_tradidiss | ORG | 12 |
| a us government | ORG | 12 |
| yang | PERSON | 12 |
| webgl | ORG | 12 |
| β πΎ23([ππ | PERSON | 12 |
| sΓΈrensen | ORG | 12 |
| spearman | PERSON | 12 |
| shapley | PERSON | 12 |
| seqc | ORG | 12 |
| gtf | ORG | 11 |
| a. et al | PERSON | 11 |
| afr | ORG | 11 |
| analysing drug prescriptions in electronic health care records | ORG | 11 |
| blca | PERSON | 11 |
| bmc bioinformatics | ORG | 11 |
| cambridge | GPE | 11 |
| chen et al | PERSON | 11 |
| de | GPE | 11 |
| delta | ORG | 11 |
| egfr | ORG | 11 |
| wt | ORG | 11 |
| hcc | ORG | 11 |
| j.a.f.g. | PERSON | 11 |
| lrs | ORG | 11 |
| lusc | GPE | 11 |
| n. | PERSON | 11 |
| nda | ORG | 11 |
| nhbe | ORG | 11 |
| rbo | ORG | 11 |
| skcm | ORG | 11 |
| seurat | ORG | 11 |
| heatmap | PERSON | 11 |
| canberra | ORG | 10 |
| m. j. | PERSON | 10 |
| h. et al | PERSON | 10 |
| ernst | GPE | 10 |
| d. et al | PERSON | 10 |
| boston | GPE | 10 |
| cqp | ORG | 10 |
| coad | ORG | 10 |
| cn | ORG | 10 |
| c65 | ORG | 10 |
| massachusetts | GPE | 10 |
| moi | ORG | 10 |
| deseq2 | ORG | 10 |
| misplice | ORG | 10 |
| tf | ORG | 10 |
| nc | ORG | 10 |
| β πΎ27([ππ1 | PERSON | 10 |
| vero e6 | ORG | 10 |
| tpm | ORG | 10 |
| heatmap | PERSON | 10 |
| scientific reports | ORG | 10 |
| silac | ORG | 10 |
| rna-seq | ORG | 10 |
| pdx | ORG | 10 |
| oscc | ORG | 10 |
| hypothalamus | ORG | 9 |
| lo | GPE | 9 |
| lin | PERSON | 9 |
| laplace-beltrami | ORG | 9 |
| l1 | ORG | 9 |
| kegg | PERSON | 9 |
| k. et al | PERSON | 9 |
| javascript | ORG | 9 |
| imd | ORG | 9 |
| cgc | ORG | 9 |
| esca | ORG | 9 |
| dnaclust | PERSON | 9 |
| d1000 | GPE | 9 |
| california | GPE | 9 |
| cwmdis | ORG | 9 |
| cam | ORG | 9 |
| ca | GPE | 9 |
| a2780 | ORG | 9 |
| mouse | PERSON | 9 |
| mgi | ORG | 9 |
| japan | GPE | 9 |
| ner | ORG | 9 |
| t. et al | PERSON | 9 |
| ngs | ORG | 9 |
| strand | GPE | 9 |
| human-cov | ORG | 9 |
| bat-cov | ORG | 9 |
| y. et al | PERSON | 9 |
| w25 g68 | PERSON | 9 |
| viterbi | PERSON | 9 |
| us | GPE | 9 |
| zhang et al | PERSON | 9 |
| science | ORG | 9 |
| Οh | ORG | 9 |
| rn | ORG | 9 |
| rt-pcr | ORG | 9 |
| pubchem | ORG | 9 |
| persson et al | PERSON | 9 |
| pavoine & ricotta | ORG | 9 |
| ov | ORG | 9 |
| san francisco | GPE | 9 |
| horvath | GPE | 8 |
| gibco | ORG | 8 |
| gordon k smyth | PERSON | 8 |
| hebert | PERSON | 8 |
| hon | ORG | 8 |
| lu | PERSON | 8 |
| invitrogen | ORG | 8 |
| journal | ORG | 8 |
| kras | ORG | 8 |
| lakshmanan et al | PERSON | 8 |
| euclidean | ORG | 8 |
| gc | ORG | 8 |
| auc | ORG | 8 |
| em | GPE | 8 |
| docker | PERSON | 8 |
| dr | GPE | 8 |
| d.a.c.h. | GPE | 8 |
| combat | ORG | 8 |
| behan | GPE | 8 |
| baltimore | GPE | 8 |
| bin | ORG | 8 |
| australia | GPE | 8 |
| ms/ms | ORG | 8 |
| aepe | ORG | 8 |
| m. a. | PERSON | 8 |
| london | GPE | 8 |
| na | ORG | 8 |
| st. louis | GPE | 8 |
| ours | ORG | 8 |
| r(p | ORG | 8 |
| z. zhang | PERSON | 8 |
| yang et al | PERSON | 8 |
| y. wang | PERSON | 8 |
| x. chen | PERSON | 8 |
| wei shi | PERSON | 8 |
| wes | ORG | 8 |
| v162 | GPE | 8 |
| v.e.n.c. | GPE | 8 |
| university of california | ORG | 8 |
| unbound | ORG | 8 |
| ππ+])[ππ | ORG | 8 |
| shanghai | GPE | 8 |
| rsubread | GPE | 8 |
| rmse | ORG | 8 |
| q. ma | PERSON | 8 |
| pubmed | ORG | 8 |
| pca-xgboost | ORG | 8 |
| pc-3 | ORG | 8 |
| pbmc | ORG | 8 |
| ohio | GPE | 8 |
| ochiai | GPE | 8 |
| sequel | ORG | 8 |
| fdr | PERSON | 7 |
| damas | PERSON | 7 |
| deepstrain | ORG | 7 |
| edwards | ORG | 7 |
| f. | GPE | 7 |
| genome biology | PERSON | 7 |
| fpkm | ORG | 7 |
| furin | ORG | 7 |
| florida | GPE | 7 |
| gao | PERSON | 7 |
| d49 | GPE | 7 |
| hgsoc | ORG | 7 |
| doi | ORG | 7 |
| cprd | ORG | 7 |
| cryptosporidium | ORG | 7 |
| cronobacter | ORG | 7 |
| chiu | PERSON | 7 |
| cancer res | PERSON | 7 |
| blanc et al | ORG | 7 |
| baker | PERSON | 7 |
| bmc genomics | ORG | 7 |
| bmc | ORG | 7 |
| alpha | GPE | 7 |
| af | ORG | 7 |
| a141 | GPE | 7 |
| icm | ORG | 7 |
| hong kong | GPE | 7 |
| plg | ORG | 7 |
| journal of vegetation science | ORG | 7 |
| stat3 | GPE | 7 |
| ο§enac | ORG | 7 |
| kundaje | GPE | 7 |
| liquidcna | PERSON | 7 |
| homotypic multiplets | PERSON | 7 |
| y. xu | PERSON | 7 |
| wilcoxon | ORG | 7 |
| w192 n17 | PERSON | 7 |
| vae-xgboost | ORG | 7 |
| thermo scientific | ORG | 7 |
| t. chen | PERSON | 7 |
| shah et al | PERSON | 7 |
| sci u s a. | PERSON | 7 |
| van hateren | PERSON | 7 |
| ratnasingham | GPE | 7 |
| mason | ORG | 7 |
| luad | PERSON | 7 |
| r. | PERSON | 7 |
| ligand | GPE | 7 |
| m. sermesant | PERSON | 7 |
| mls | ORG | 7 |
| lv | ORG | 7 |
| nk | ORG | 7 |
| nmr | ORG | 7 |
| pmc | ORG | 7 |
| q. | PERSON | 7 |
| ds | PERSON | 6 |
| gisaid | GPE | 6 |
| e. et al | PERSON | 6 |
| edgar | ORG | 6 |
| edwards et al | PERSON | 6 |
| ensembl refseq-ncbi | PERSON | 6 |
| fig | GPE | 6 |
| furin | ORG | 6 |
| g. et al | PERSON | 6 |
| geo | ORG | 6 |
| davidson no | ORG | 6 |
| hla-drb1 | ORG | 6 |
| go | ORG | 6 |
| grid | ORG | 6 |
| guangdong | GPE | 6 |
| guangzhou | GPE | 6 |
| hebert et al | PERSON | 6 |
| hu | PERSON | 6 |
| j. r. | PERSON | 6 |
| j. yang | PERSON | 6 |
| jiang | GPE | 6 |
| johnson | PERSON | 6 |
| dic | ORG | 6 |
| kim | PERSON | 6 |
| drg | ORG | 6 |
| braukmann | GPE | 6 |
| cΞ± rmsd | PERSON | 6 |
| benjamini-hochberg | ORG | 6 |
| lb | GPE | 6 |
| amr | ORG | 6 |
| adam | PERSON | 6 |
| allen | PERSON | 6 |
| arbab | ORG | 6 |
| archr | PERSON | 6 |
| b. y. | PERSON | 6 |
| b. et al | PERSON | 6 |
| bsbolt | ORG | 6 |
| bayes | ORG | 6 |
| berlin | GPE | 6 |
| chlorocebus | ORG | 6 |
| box | PERSON | 6 |
| cfe | ORG | 6 |
| ci | ORG | 6 |
| cmac | ORG | 6 |
| crc | ORG | 6 |
| california, usa | GPE | 6 |
| cancer | ORG | 6 |
| cancer genome atlas research network | ORG | 6 |
| catanzaro | GPE | 6 |
| chang | PERSON | 6 |
| l. et al | PERSON | 6 |
| wilson | ORG | 6 |
| lgg | ORG | 6 |
| tss | ORG | 6 |
| taylor | PERSON | 6 |
| texas | GPE | 6 |
| upf | ORG | 6 |
| vcn | ORG | 6 |
| vep | ORG | 6 |
| veridical | GPE | 6 |
| washington university school of medicine | ORG | 6 |
| whittaker | ORG | 6 |
| wu | PERSON | 6 |
| c-myc | ORG | 6 |
| eq | GPE | 6 |
| k0 | PERSON | 6 |
| meshclust2 | GPE | 6 |
| n.s. | GPE | 6 |
| scrnaseq | ORG | 6 |
| the department of automation in xiamen university | ORG | 6 |
| the second fundamental form | ORG | 6 |
| the united states | GPE | 6 |
| trait | GPE | 6 |
| z1000(x | PERSON | 6 |
| ΣΡ | PERSON | 6 |
| β | PERSON | 6 |
| lsb | ORG | 6 |
| tts | ORG | 6 |
| dis-)similarity | ORG | 6 |
| stevens-johnson | PERSON | 6 |
| princeton university | ORG | 6 |
| snf | ORG | 6 |
| melissa gymrek | PERSON | 6 |
| mitobreak | ORG | 6 |
| n. et al | PERSON | 6 |
| ncbi refseq | ORG | 6 |
| nih | ORG | 6 |
| nnmd | ORG | 6 |
| np | ORG | 6 |
| o. | GPE | 6 |
| pbs | ORG | 6 |
| powell et al | PERSON | 6 |
| mo | GPE | 6 |
| quasr | ORG | 6 |
| s. et al | PERSON | 6 |
| sider | ORG | 6 |
| scna | ORG | 6 |
| sclc | ORG | 6 |
| smrt_m9enrich | PERSON | 6 |
| refseq-ncbi | ORG | 6 |
| results | ORG | 6 |
| r. m. | PERSON | 6 |
| r. clarke | PERSON | 6 |
| hz | PERSON | 5 |
| kirc | ORG | 5 |
| irf1 | ORG | 5 |
| ish | ORG | 5 |
| ikemura | PERSON | 5 |
| infinium ii | ORG | 5 |
| j. c. | PERSON | 5 |
| j. d. | PERSON | 5 |
| j. p. | PERSON | 5 |
| journal of machine learning research | ORG | 5 |
| k-777 | GPE | 5 |
| k161 | GPE | 5 |
| ldp | ORG | 5 |
| kellis | GPE | 5 |
| kingma | ORG | 5 |
| kΞΈ | GPE | 5 |
| l.c. | GPE | 5 |
| github | ORG | 5 |
| lecif | ORG | 5 |
| le | GPE | 5 |
| m.j. | GPE | 5 |
| m9enrich_seq/rienrich_seq | ORG | 5 |
| mda | ORG | 5 |
| mevis | ORG | 5 |
| mit | ORG | 5 |
| h. li | PERSON | 5 |
| -10 | ORG | 5 |
| genome res | PERSON | 5 |
| cwm | ORG | 5 |
| mckerrow jh | ORG | 5 |
| a. k. | PERSON | 5 |
| ac | ORG | 5 |
| afnd | ORG | 5 |
| abe t | PERSON | 5 |
| amygdala | GPE | 5 |
| bsg/cd147 | ORG | 5 |
| biorxiv | ORG | 5 |
| bray-curtis | ORG | 5 |
| c. et al | PERSON | 5 |
| cdfdis | ORG | 5 |
| computational biology | PERSON | 5 |
| garrison | ORG | 5 |
| ctail | ORG | 5 |
| d. p. | PERSON | 5 |
| dcw | ORG | 5 |
| durbin et al | PERSON | 5 |
| e. p. hoffman | PERSON | 5 |
| enac | PERSON | 5 |
| eur | GPE | 5 |
| eds | ORG | 5 |
| europe | LOC | 5 |
| frankfurt | GPE | 5 |
| gq | ORG | 5 |
| marczewski-steinhaus | ORG | 5 |
| the national academy of sciences | ORG | 5 |
| mesh | ORG | 5 |
| z. liu | PERSON | 5 |
| victoria | GPE | 5 |
| w188 c24 | GPE | 5 |
| wagner | GPE | 5 |
| wuhan | GPE | 5 |
| x. wang | PERSON | 5 |
| x. zhang | PERSON | 5 |
| xu | PERSON | 5 |
| y. liu | PERSON | 5 |
| y.b. | GPE | 5 |
| yan | PERSON | 5 |
| yu | PERSON | 5 |
| zhao | GPE | 5 |
| triplexator | GPE | 5 |
| zheng | PERSON | 5 |
| al | ORG | 5 |
| nβd | PERSON | 5 |
| preprint https://doi.org/10.1101/2020.12.26.424429 http://creativecommons.org/licenses/by-nc-nd/4.0/ figure | PERSON | 5 |
| rseqtu | GPE | 5 |
| β 1 | PERSON | 5 |
| un | ORG | 5 |
| x(t | GPE | 5 |
| x(t+n | ORG | 5 |
| z49(x | ORG | 5 |
| myeloid | PERSON | 5 |
| vex | ORG | 5 |
| vol | ORG | 5 |
| tian | PERSON | 5 |
| podani | ORG | 5 |
| nccit | ORG | 5 |
| taΓ― forest | ORG | 5 |
| nature communications | ORG | 5 |
| nelson | GPE | 5 |
| next | ORG | 5 |
| p. d. n. | PERSON | 5 |
| pa | ORG | 5 |
| pdui | ORG | 5 |
| pacific symposium on biocomputing | ORG | 5 |
| park | GPE | 5 |
| phirbo | PERSON | 5 |
| nature publishing group | ORG | 5 |
| princeton | GPE | 5 |
| song | PERSON | 5 |
| r. et al | PERSON | 5 |
| tmm | ORG | 5 |
| t.y. | GPE | 5 |
| spclust | ORG | 5 |
| supplementary data | ORG | 5 |
| scott j. | PERSON | 5 |
| str | ORG | 5 |
| refseq-rsubread | LOC | 5 |
| rafsil | ORG | 5 |
| inria | ORG | 4 |
| huang | PERSON | 4 |
| heidelberg | GPE | 4 |
| hart | PERSON | 4 |
| hajibabaei | GPE | 4 |
| html | ORG | 4 |
| hpo | ORG | 4 |
| hiv-1 | ORG | 4 |
| hcm | ORG | 4 |
| genomics | ORG | 4 |
| h1n1 | GPE | 4 |
| h. zhang | PERSON | 4 |
| ORG | 4 | |
| golgi | GPE | 4 |
| genomes project consortium | ORG | 4 |
| gene ontology | PERSON | 4 |
| gauss | GPE | 4 |
| gui | PERSON | 4 |
| gsm3660650 | ORG | 4 |
| interferon | ORG | 4 |
| gr | ORG | 4 |
| irm | ORG | 4 |
| leinster & cobbold | ORG | 4 |
| j. j. | PERSON | 4 |
| levine | PERSON | 4 |
| g. j. | PERSON | 4 |
| manhattan | GPE | 4 |
| malachi griffith | PERSON | 4 |
| mse | ORG | 4 |
| mle | ORG | 4 |
| matlab | ORG | 4 |
| m. de craene | PERSON | 4 |
| lowe | PERSON | 4 |
| liu | PERSON | 4 |
| lepΕ‘ | GPE | 4 |
| j. m. | PERSON | 4 |
| lee ty | PERSON | 4 |
| keras | GPE | 4 |
| kennedy s | PERSON | 4 |
| johns hopkins university school of medicine | ORG | 4 |
| json | ORG | 4 |
| jjjjl | PERSON | 4 |
| j. xuan | PERSON | 4 |
| j. wang | PERSON | 4 |
| j. t. | PERSON | 4 |
| g. m. | PERSON | 4 |
| c18 | ORG | 4 |
| folmer | ORG | 4 |
| acc | PERSON | 4 |
| mikhailova | ORG | 4 |
| c. l. | PERSON | 4 |
| bowtie2 | PERSON | 4 |
| bioinforma | PERSON | 4 |
| bar graph | PERSON | 4 |
| baker ml | PERSON | 4 |
| b. liu | PERSON | 4 |
| arabidopsis | GPE | 4 |
| adams pd | ORG | 4 |
| ar | ORG | 4 |
| cna | ORG | 4 |
| aha | ORG | 4 |
| adr | ORG | 4 |
| a. m. et al | PERSON | 4 |
| a. lalande | PERSON | 4 |
| a. j. | PERSON | 4 |
| a. c. | PERSON | 4 |
| 1b | ORG | 4 |
| 104 | ORG | 4 |
| 08544, usa | GPE | 4 |
| ccl | ORG | 4 |
| crispr | ORG | 4 |
| farmington | GPE | 4 |
| davies et al | PERSON | 4 |
| fancm | ORG | 4 |
| f. et al | PERSON | 4 |
| f. a. | PERSON | 4 |
| f. ( | ORG | 4 |
| extended data fig | ORG | 4 |
| escherichia | GPE | 4 |
| engl | ORG | 4 |
| e215 f63 | GPE | 4 |
| e.l. | GPE | 4 |
| da | GPE | 4 |
| ct | GPE | 4 |
| d. izquierdo-garcia | PERSON | 4 |
| crohn | PERSON | 4 |
| conticello | ORG | 4 |
| chao et al | PERSON | 4 |
| chao | GPE | 4 |
| cell | ORG | 4 |
| carlsson et al | PERSON | 4 |
| ctsl | PERSON | 4 |
| ctsb | ORG | 4 |
| meissner | ORG | 4 |
| bakhtiari | ORG | 4 |
| minfi | GPE | 4 |
| supp tab 1 | PERSON | 4 |
| x. et al | PERSON | 4 |
| x. pennec | PERSON | 4 |
| wu x | PERSON | 4 |
| welch | PERSON | 4 |
| wada y | PERSON | 4 |
| wada k | PERSON | 4 |
| wgs | ORG | 4 |
| wgcna | ORG | 4 |
| w192 q18 | PERSON | 4 |
| w188 | GPE | 4 |
| venn | PERSON | 4 |
| ubiquitin | PERSON | 4 |
| utr | ORG | 4 |
| u. | GPE | 4 |
| treg | GPE | 4 |
| toronto | GPE | 4 |
| tan | GPE | 4 |
| table 1 | GPE | 4 |
| ty | GPE | 4 |
| trf | ORG | 4 |
| tm2 | ORG | 4 |
| y. zhang | PERSON | 4 |
| yang liao | PERSON | 4 |
| zhou | PERSON | 4 |
| the national institutes of health | ORG | 4 |
| mismatches | ORG | 4 |
| π | PERSON | 4 |
| ππ | PERSON | 4 |
| βπ½23[π+ | ORG | 4 |
| β πΎ*([ππ | PERSON | 4 |
| β π[ππ | PERSON | 4 |
| βet al. | PERSON | 4 |
| ΞΈ1,Ο1 | GPE | 4 |
| the united kingdom | GPE | 4 |
| testtherapydf | GPE | 4 |
| zhou et al | PERSON | 4 |
| ncrnas | ORG | 4 |
| nm-1s-1 | ORG | 4 |
| mouse | PERSON | 4 |
| max | PERSON | 4 |
| magenta | PERSON | 4 |
| k1 | ORG | 4 |
| islet1 | GPE | 4 |
| influenza | ORG | 4 |
| heterotypic multiplets | PERSON | 4 |
| t160 | GPE | 4 |
| z. et al | PERSON | 4 |
| stuart | ORG | 4 |
| pep | ORG | 4 |
| r. a. | PERSON | 4 |
| prg(cre/+)pten(lox | PERSON | 4 |
| poplin | GPE | 4 |
| playback | PERSON | 4 |
| pascal | PERSON | 4 |
| pr | ORG | 4 |
| ppbp | PERSON | 4 |
| pparg | ORG | 4 |
| pfa | ORG | 4 |
| pdac | ORG | 4 |
| r. j. | PERSON | 4 |
| oikos | ORG | 4 |
| of | ORG | 4 |
| o. camara | PERSON | 4 |
| newman | PERSON | 4 |
| ny | GPE | 4 |
| nci | ORG | 4 |
| multiple sclerosis | ORG | 4 |
| springer international publishing | ORG | 4 |
| multi | ORG | 4 |
| r. a. lempicki | PERSON | 4 |
| plos one | ORG | 4 |
| sci u | PERSON | 4 |
| ssr | ORG | 4 |
| sokal & sneath | ORG | 4 |
| random forest | ORG | 4 |
| simpson | ORG | 4 |
| sigma | GPE | 4 |
| sharona shleizer-burko | PERSON | 4 |
| sesame | ORG | 4 |
| schmidt | PERSON | 4 |
| scatter | PERSON | 4 |
| svm | ORG | 4 |
| stad | GPE | 4 |
| ssl | ORG | 4 |
| samtools | ORG | 4 |
| s23 | ORG | 4 |
| s10 | ORG | 4 |
| s., | ORG | 4 |
| ricotta & bacaro | ORG | 4 |
| reviews | PERSON | 4 |
| renard | ORG | 4 |
| rec | PERSON | 4 |
| spec | PERSON | 4 |
| halliwell | GPE | 3 |
| h. yu | PERSON | 3 |
| haixu tang | PERSON | 3 |
| hbe | ORG | 3 |
| h22 | ORG | 3 |
| huazhong university of science and technology | ORG | 3 |
| h. wang | PERSON | 3 |
| h. l. ji | PERSON | 3 |
| greene | PERSON | 3 |
| harris rs | PERSON | 3 |
| graphaligner | ORG | 3 |
| hanukoglu | PERSON | 3 |
| huang ch | PERSON | 3 |
| harvard | ORG | 3 |
| harvard medical school | ORG | 3 |
| heatmaps | PERSON | 3 |
| heinze | ORG | 3 |
| helicobacter | PERSON | 3 |
| heng | ORG | 3 |
| hill | PERSON | 3 |
| horvath 2005 | PERSON | 3 |
| huang et al. | PERSON | 3 |
| gomez | PERSON | 3 |
| gonzalez | GPE | 3 |
| endometrioid serous normal | PERSON | 3 |
| ghodsi | PERSON | 3 |
| george | PERSON | 3 |
| icb | ORG | 3 |
| eddy | PERSON | 3 |
| PERSON | 3 | |
| epigenomics consortium | ORG | 3 |
| erra | PERSON | 3 |
| fmg | ORG | 3 |
| feng | GPE | 3 |
| figure1 | PERSON | 3 |
| fuhrman ja | PERSON | 3 |
| g.s.a. | ORG | 3 |
| g/c | ORG | 3 |
| gag | ORG | 3 |
| gbm | ORG | 3 |
| gga | ORG | 3 |
| gh | GPE | 3 |
| gpe | ORG | 3 |
| gse147507 mock mock mock | PERSON | 3 |
| gse56189 mers-cov | ORG | 3 |
| gaidatzis | GPE | 3 |
| galiez et al | PERSON | 3 |
| genetics | ORG | 3 |
| genome | ORG | 3 |
| genome research | ORG | 3 |
| hutter | PERSON | 3 |
| loa | ORG | 3 |
| iii | ORG | 3 |
| khristich | GPE | 3 |
| kulczynski | ORG | 3 |
| kumar | GPE | 3 |
| kwon | PERSON | 3 |
| l. huang | PERSON | 3 |
| l. pachter | PERSON | 3 |
| ld | GPE | 3 |
| lihc | GPE | 3 |
| llc | ORG | 3 |
| lrf | ORG | 3 |
| lstm | ORG | 3 |
| lakshmanan | GPE | 3 |
| lamparter d | PERSON | 3 |
| leipzig | GPE | 3 |
| li x | PERSON | 3 |
| li et al | PERSON | 3 |
| li et al. | GPE | 3 |
| lille | GPE | 3 |
| epe | ORG | 3 |
| ludtke sj | PERSON | 3 |
| m. g. | PERSON | 3 |
| m. li | PERSON | 3 |
| m. pop | PERSON | 3 |
| m. r. | PERSON | 3 |
| kidney | PERSON | 3 |
| khan | GPE | 3 |
| il-6/il-27 | ORG | 3 |
| kendall | GPE | 3 |
| illumina infinium | ORG | 3 |
| illumina wgs | LOC | 3 |
| infinium | PERSON | 3 |
| international journal of computer vision | ORG | 3 |
| j. l. | PERSON | 3 |
| j. li | PERSON | 3 |
| j. m. et al | PERSON | 3 |
| j. med | PERSON | 3 |
| j.a. | GPE | 3 |
| j.k. | GPE | 3 |
| jmp | ORG | 3 |
| james | PERSON | 3 |
| jia | PERSON | 3 |
| johns hopkins university | ORG | 3 |
| journal of biological chemistry | ORG | 3 |
| k | GPE | 3 |
| k. j. | PERSON | 3 |
| k. m. | PERSON | 3 |
| k.a. | GPE | 3 |
| kanaya s | GPE | 3 |
| kanga | GPE | 3 |
| kaufmann | PERSON | 3 |
| kauppila | GPE | 3 |
| ecology letters | PERSON | 3 |
| cesc | GPE | 3 |
| ensembl | ORG | 3 |
| bottaοΏ½dukΓ‘t | ORG | 3 |
| anderson | PERSON | 3 |
| apob | PERSON | 3 |
| audano et al | PERSON | 3 |
| austria | GPE | 3 |
| b. t. sherman | PERSON | 3 |
| b. zhang | PERSON | 3 |
| b., & gunawan | ORG | 3 |
| bacc | ORG | 3 |
| bam | ORG | 3 |
| bed | ORG | 3 |
| bsg | ORG | 3 |
| bwa-mem | ORG | 3 |
| ba | GPE | 3 |
| bacolla | PERSON | 3 |
| barretina | GPE | 3 |
| barrett | PERSON | 3 |
| barts cancer institute | ORG | 3 |
| bayes factor | ORG | 3 |
| beta | GPE | 3 |
| bibikova | ORG | 3 |
| bioconda | GPE | 3 |
| bioconductor | ORG | 3 |
| bostrom et al | PERSON | 3 |
| anand | GPE | 3 |
| amsterdam | GPE | 3 |
| ali | PERSON | 3 |
| agc | ORG | 3 |
| m9enrich_seq | ORG | 3 |
| 3d | ORG | 3 |
| a. d. osterhaus | PERSON | 3 |
| a. m. | PERSON | 3 |
| a. r., | PERSON | 3 |
| a.d. | GPE | 3 |
| a.s. | GPE | 3 |
| a549 | GPE | 3 |
| acm | ORG | 3 |
| af-35x v1.1-21x | PERSON | 3 |
| ala | ORG | 3 |
| alexandrov lb | PERSON | 3 |
| apa | ORG | 3 |
| arv | ORG | 3 |
| asn | ORG | 3 |
| asp | ORG | 3 |
| atac-seq | PERSON | 3 |
| adam m. novak | PERSON | 3 |
| afonine pv | PERSON | 3 |
| ai | PERSON | 3 |
| ala | ORG | 3 |
| alexander | PERSON | 3 |
| botta-dukΓ‘t | ORG | 3 |
| broad/sanger | ORG | 3 |
| emdb | ORG | 3 |
| c(t | ORG | 3 |
| computational models of the heart | ORG | 3 |
| coulouris | GPE | 3 |
| cryptopain-1 | GPE | 3 |
| cys | PERSON | 3 |
| d. m. herrington | PERSON | 3 |
| d. rueckert | PERSON | 3 |
| d66 g68 | PERSON | 3 |
| david | ORG | 3 |
| diamond | PERSON | 3 |
| dq | GPE | 3 |
| deep learning | PERSON | 3 |
| deepmm | ORG | 3 |
| dharmacon | ORG | 3 |
| dictyostelium | PERSON | 3 |
| differential essentiality ( | ORG | 3 |
| diversity | ORG | 3 |
| dm | GPE | 3 |
| dolzhenko | PERSON | 3 |
| dong et al | PERSON | 3 |
| doubletdetector | ORG | 3 |
| dresden | GPE | 3 |
| e. j. | PERSON | 3 |
| e. v. | PERSON | 3 |
| combat+qn | PERSON | 3 |
| clostridium | GPE | 3 |
| cloop | GPE | 3 |
| caffrey cr | PERSON | 3 |
| c. catana | PERSON | 3 |
| c. drosten | PERSON | 3 |
| c. tobon-gomez | PERSON | 3 |
| ca 90095 | ORG | 3 |
| cdf | ORG | 3 |
| ckgas | PERSON | 3 |
| crispr/cas9 | ORG | 3 |
| crisprcleanr | PERSON | 3 |
| css | ORG | 3 |
| cvd | ORG | 3 |
| cambridge university press | ORG | 3 |
| clique | PERSON | 3 |
| canada | GPE | 3 |
| cardoso | ORG | 3 |
| carmona | GPE | 3 |
| carneiro | GPE | 3 |
| cell ranger | PERSON | 3 |
| chip | ORG | 3 |
| chen m | PERSON | 3 |
| chiu w | PERSON | 3 |
| chordata | PERSON | 3 |
| cincinnati | GPE | 3 |
| m.g. | PERSON | 3 |
| s19 | ORG | 3 |
| mad | ORG | 3 |
| valid | ORG | 3 |
| virus | PERSON | 3 |
| w. c. liu | PERSON | 3 |
| w. huang da | PERSON | 3 |
| w. wang | PERSON | 3 |
| w. et al | PERSON | 3 |
| w.l. | GPE | 3 |
| w188 q18 | PERSON | 3 |
| wallis sc | GPE | 3 |
| wang h | PERSON | 3 |
| wang j | PERSON | 3 |
| washington university | ORG | 3 |
| wedge dc | GPE | 3 |
| weiss | GPE | 3 |
| wellcome genome campus | ORG | 3 |
| williams | PERSON | 3 |
| wolfe et al | PERSON | 3 |
| wolfgang huber | PERSON | 3 |
| wrapp | PERSON | 3 |
| x. yang | PERSON | 3 |
| xena | ORG | 3 |
| xiamen | GPE | 3 |
| yh | ORG | 3 |
| yang y | PERSON | 3 |
| vienna | GPE | 3 |
| v. et al | PERSON | 3 |
| skuse | ORG | 3 |
| united kingdom | GPE | 3 |
| south africa | GPE | 3 |
| spain | GPE | 3 |
| state university | ORG | 3 |
| statistical atlases | ORG | 3 |
| sun yat-sen university | PERSON | 3 |
| swenson | PERSON | 3 |
| t. l. | PERSON | 3 |
| t. mansi | PERSON | 3 |
| t. βet al | PERSON | 3 |
| ta t1 / | PERSON | 3 |
| ta t3 | PERSON | 3 |
| th-1 | ORG | 3 |
| tmprss | ORG | 3 |
| tr | GPE | 3 |
| table s4 | PERSON | 3 |
| terashi g | PERSON | 3 |
| terwilliger tc | ORG | 3 |
| thermo | GPE | 3 |
| tofac | PERSON | 3 |
| toxoplasma | PERSON | 3 |
| tsugawa | ORG | 3 |
| tuteja | GPE | 3 |
| u.s. | GPE | 3 |
| ye | GPE | 3 |
| yingying cao | PERSON | 3 |
| zeisel | GPE | 3 |
| zhang h | PERSON | 3 |
| the protein data bank | ORG | 3 |
| the institute of origin | ORG | 3 |
| thiamine+c2h2o | ORG | 3 |
| thiamine+c2h4o | PERSON | 3 |
| time / min | ORG | 3 |
| vi | GPE | 3 |
| violin | GPE | 3 |
| vitro | PERSON | 3 |
| wpearson | ORG | 3 |
| x(t+35 | GPE | 3 |
| x(t+5)/x(t+14)/x(t+28 | PERSON | 3 |
| xik | PERSON | 3 |
| Ε½. | GPE | 3 |
| Ξ£h | ORG | 3 |
| Ξ΅(i | GPE | 3 |
| βthe | ORG | 3 |
| βπΎπΏ | PERSON | 3 |
| β 2π1π β | PERSON | 3 |
| β π+,- | PERSON | 3 |
| βΌ | GPE | 3 |
| π(π | GPE | 3 |
| π$% & | ORG | 3 |
| mae | ORG | 3 |
| the new york genome center | ORG | 3 |
| the first affiliated hospital | ORG | 3 |
| the american mathematical society | ORG | 3 |
| gnomad | ORG | 3 |
| zhu | PERSON | 3 |
| al e xp | PERSON | 3 |
| alpha | GPE | 3 |
| arxiv | ORG | 3 |
| b. galiez et al | PERSON | 3 |
| cbioportal | ORG | 3 |
| dij | ORG | 3 |
| dβ | PERSON | 3 |
| encode | ORG | 3 |
| ge | ORG | 3 |
| http://paperpile.com/b/h8ctd0/xhkpd | GPE | 3 |
| synonyms | GPE | 3 |
| linear | ORG | 3 |
| lo g2 | GPE | 3 |
| min score=12 | PERSON | 3 |
| mindepth | ORG | 3 |
| p-s121 pphln1 | PERSON | 3 |
| preprint https://doi.org/10.1101/2020.12.26.424429 http://creativecommons.org/licenses/by-nc-nd/4.0/ | PERSON | 3 |
| preprint https://doi.org/10.1101/2021.01.05.425384 http://creativecommons.org/licenses/by/4.0/ .cc | PERSON | 3 |
| ri | PERSON | 3 |
| s li | PERSON | 3 |
| sclapa for learning association | ORG | 3 |
| snyder et al | PERSON | 3 |
| pttheragnostic/dnamito | GPE | 3 |
| singh | PERSON | 3 |
| np_nts | ORG | 3 |
| nearing et al | PERSON | 3 |
| nextstrain | ORG | 3 |
| nextstrain | ORG | 3 |
| nguyen | GPE | 3 |
| nik-zainal et al | PERSON | 3 |
| nipperess | GPE | 3 |
| noise | PERSON | 3 |
| nr5a2 | ORG | 3 |
| numpy | GPE | 3 |
| o. bernard | PERSON | 3 |
| oh | GPE | 3 |
| omim | ORG | 3 |
| oecologia | GPE | 3 |
| olson | ORG | 3 |
| operon | GPE | 3 |
| oslo | ORG | 3 |
| oxford university press | ORG | 3 |
| p. a. | PERSON | 3 |
| p. k. sorger | PERSON | 3 |
| p. et al | PERSON | 3 |
| pdh | ORG | 3 |
| pgls | ORG | 3 |
| pml | PERSON | 3 |
| nat med | PERSON | 3 |
| nkg7 | PERSON | 3 |
| pten | ORG | 3 |
| nhgri | ORG | 3 |
| mers-cov mrc5 | ORG | 3 |
| sierra | ORG | 3 |
| mgh, hms | ORG | 3 |
| mif | ORG | 3 |
| mjg | ORG | 3 |
| modifier | GPE | 3 |
| mst | ORG | 3 |
| mardia | ORG | 3 |
| matar | GPE | 3 |
| mcfarland | GPE | 3 |
| medical image analysis | ORG | 3 |
| miller | ORG | 3 |
| mol evol | PERSON | 3 |
| mousavi et al | PERSON | 3 |
| mukhopadhyay et al | PERSON | 3 |
| multiplets | PERSON | 3 |
| murray | GPE | 3 |
| n β | ORG | 3 |
| n. engl | PERSON | 3 |
| n.s. | GPE | 3 |
| n439k | PERSON | 3 |
| n501y | ORG | 3 |
| ncbi geo | ORG | 3 |
| pp | ORG | 3 |
| n = | ORG | 3 |
| pacific biosciences sequel | ORG | 3 |
| robinson | ORG | 3 |
| rosenthal pj | PERSON | 3 |
| roux s | ORG | 3 |
| run 1 | PERSON | 3 |
| s. k. | PERSON | 3 |
| s14 | ORG | 3 |
| s15 | ORG | 3 |
| sarsβcov | PERSON | 3 |
| sas | ORG | 3 |
| scope | ORG | 3 |
| sdf | ORG | 3 |
| sg | GPE | 3 |
| sh | ORG | 3 |
| sja | ORG | 3 |
| st | ORG | 3 |
| string | ORG | 3 |
| sajid m | PERSON | 3 |
| schaefermeier | ORG | 3 |
| schwann | GPE | 3 |
| sci u s | PERSON | 3 |
| shen | PERSON | 3 |
| padj | PERSON | 3 |
| shen hb | PERSON | 3 |
| shrikumar | GPE | 3 |
| rosenberg et al | PERSON | 3 |
| sjs | ORG | 3 |
| roadmap epigenomics consortium | ORG | 3 |
| r core team | ORG | 3 |
| paul flicek | PERSON | 3 |
| patel | GPE | 3 |
| parkville | GPE | 3 |
| ricotta et al | PERSON | 3 |
| porubsky | ORG | 3 |
| primarycapsule | ORG | 3 |
| principal component analysis | ORG | 3 |
| prosser | GPE | 3 |
| qc | GPE | 3 |
| qin | PERSON | 3 |
| queen mary university of london | ORG | 3 |
| q147 | PERSON | 3 |
| r. satija | PERSON | 3 |
| reviews genetics | PERSON | 3 |
| recall | ORG | 3 |
| recht | ORG | 3 |
| ren j | PERSON | 3 |
| ricotta & pavoine | ORG | 3 |
| repeats | PERSON | 3 |
| relu | ORG | 3 |
| rfam | ORG | 3 |
| h. wu | PERSON | 2 |
| h.h. | GPE | 2 |
| hdr | GPE | 2 |
| hg00732 | GPE | 2 |
| hla-b*15:02 | ORG | 2 |
| hamilton ce | PERSON | 2 |
| hmmer | ORG | 2 |
| hla-c cd44 | ORG | 2 |
| hla-spread | ORG | 2 |
| hnsc | ORG | 2 |
| hts | ORG | 2 |
| hamilton | PERSON | 2 |
| hall | PERSON | 2 |
| h. langet | PERSON | 2 |
| haeussler m, zweig as | ORG | 2 |
| h. pimentel | PERSON | 2 |
| gunderson | GPE | 2 |
| h. l. | PERSON | 2 |
| guelph | GPE | 2 |
| gorospe m | ORG | 2 |
| gower | ORG | 2 |
| graves | PERSON | 2 |
| hannan | ORG | 2 |
| grohmann | ORG | 2 |
| grun d | PERSON | 2 |
| gu et al | PERSON | 2 |
| guestrin | PERSON | 2 |
| h. g. | PERSON | 2 |
| guo | PERSON | 2 |
| gupta | ORG | 2 |
| gurney | PERSON | 2 |
| gut | PERSON | 2 |
| gymrek | ORG | 2 |
| gymrek et al | PERSON | 2 |
| h. delingette | PERSON | 2 |
| hank | PERSON | 2 |
| hyperparameter | ORG | 2 |
| harvard university | ORG | 2 |
| i. et al | PERSON | 2 |
| hunter | ORG | 2 |
| hypil- | ORG | 2 |
| hΓ©rault & honnay | ORG | 2 |
| i. moraga | PERSON | 2 |
| i. moraga et al. | PERSON | 2 |
| i. verdinelli | PERSON | 2 |
| i. wolf | PERSON | 2 |
| icgc | ORG | 2 |
| harvard-mit health science and technology | ORG | 2 |
| iidp | ORG | 2 |
| il | GPE | 2 |
| il-2 | PERSON | 2 |
| iml | ORG | 2 |
| goran nenadic | PERSON | 2 |
| irf1 knockdown | PERSON | 2 |
| introduction | ORG | 2 |
| huang et al | PERSON | 2 |
| huang y | PERSON | 2 |
| huang sy | PERSON | 2 |
| hsieh | GPE | 2 |
| hersberger | PERSON | 2 |
| heterotypic | PERSON | 2 |
| hickey | GPE | 2 |
| hinton | ORG | 2 |
| hinxton | GPE | 2 |
| hiscock | GPE | 2 |
| histogram | ORG | 2 |
| hitchcock | ORG | 2 |
| hochberg | PERSON | 2 |
| hodgkin-huxley | ORG | 2 |
| hoffman | PERSON | 2 |
| holtzer | GPE | 2 |
| horvathmammalmethylchip40 | ORG | 2 |
| hothorn | ORG | 2 |
| hou et al | PERSON | 2 |
| gordon | GPE | 2 |
| feng z | PERSON | 2 |
| google llc | ORG | 2 |
| fluorescent | PERSON | 2 |
| fanconi anemia | ORG | 2 |
| farrell | ORG | 2 |
| fast | PERSON | 2 |
| faust k | ORG | 2 |
| fazel | GPE | 2 |
| felix schlesinger | PERSON | 2 |
| findmarkers | ORG | 2 |
| fourier | ORG | 2 |
| g. krishnamurthi | PERSON | 2 |
| fourier analysis | PERSON | 2 |
| fractal dimensions | PERSON | 2 |
| fu l | PERSON | 2 |
| fudan university | ORG | 2 |
| fujian 361008 | GPE | 2 |
| g. carlsson | PERSON | 2 |
| g. consortium | ORG | 2 |
| faculty of biology | ORG | 2 |
| fp | ORG | 2 |
| fos | ORG | 2 |
| fo | ORG | 2 |
| european heart journal - cardiovascular imaging | ORG | 2 |
| illumina inc | ORG | 2 |
| european respiratory journal | ORG | 2 |
| evans | PERSON | 2 |
| f. j. | PERSON | 2 |
| f. j. theis | PERSON | 2 |
| f. j. de sauvage | PERSON | 2 |
| f. jacob | PERSON | 2 |
| f. mao | PERSON | 2 |
| f. βet al | PERSON | 2 |
| f., viehweger | PERSON | 2 |
| f63 | ORG | 2 |
| false | ORG | 2 |
| fbs | ORG | 2 |
| fn | ORG | 2 |
| g. f. rimmelzwaan | PERSON | 2 |
| g. p. nolan | PERSON | 2 |
| glioma | GPE | 2 |
| genbank | ORG | 2 |
| gvhd | ORG | 2 |
| gagneur | GPE | 2 |
| gal | ORG | 2 |
| gao y | PERSON | 2 |
| gao et al | PERSON | 2 |
| gatchel | PERSON | 2 |
| geer | PERSON | 2 |
| genome res 24 | PERSON | 2 |
| g. p. and | PERSON | 2 |
| genomes project | ORG | 2 |
| genomics viewer | PERSON | 2 |
| gentzsch | PERSON | 2 |
| gil mcvean | PERSON | 2 |
| gilbert | PERSON | 2 |
| gilliland g | PERSON | 2 |
| github | GPE | 2 |
| gtex consortium | ORG | 2 |
| gse148729 sars- | PERSON | 2 |
| gse148729 | PERSON | 2 |
| gnps | ORG | 2 |
| g. pedrizzetti | PERSON | 2 |
| g. r. whittaker | PERSON | 2 |
| g. schreiber | PERSON | 2 |
| g. simmons | PERSON | 2 |
| g. tziritas | PERSON | 2 |
| g. uze | PERSON | 2 |
| g. yang | PERSON | 2 |
| g. yu | PERSON | 2 |
| g. zhang | PERSON | 2 |
| g.p. | PERSON | 2 |
| g/c fraction | ORG | 2 |
| g165 g22 | PERSON | 2 |
| g165 w25 t69 | PERSON | 2 |
| g67 t69 | PERSON | 2 |
| gg | PERSON | 2 |
| isbn | ORG | 2 |
| l. jiang | PERSON | 2 |
| illumina miseq | ORG | 2 |
| l. n., gruber | PERSON | 2 |
| kutalik z | PERSON | 2 |
| l. a. | PERSON | 2 |
| l. chen | PERSON | 2 |
| l. ettwiller | PERSON | 2 |
| l. guo | PERSON | 2 |
| esteva | GPE | 2 |
| l. mazutis | PERSON | 2 |
| l. p. badano | PERSON | 2 |
| ldp lj | PERSON | 2 |
| l. ren | PERSON | 2 |
| l. wasserman | PERSON | 2 |
| l. xu | PERSON | 2 |
| l. zhang | PERSON | 2 |
| l.w. | GPE | 2 |
| larp7 | GPE | 2 |
| lc | PERSON | 2 |
| kurokawa | PERSON | 2 |
| kular | GPE | 2 |
| kuhn | PERSON | 2 |
| ku | GPE | 2 |
| kinetic | PERSON | 2 |
| kingsley 2018 | PERSON | 2 |
| kinouchi m | PERSON | 2 |
| kiselev vy | PERSON | 2 |
| klotzle | GPE | 2 |
| knott tj | PERSON | 2 |
| knoxville | GPE | 2 |
| koleff | GPE | 2 |
| kolesnikov | GPE | 2 |
| koren | ORG | 2 |
| kraken | ORG | 2 |
| kramer | PERSON | 2 |
| kras | PERSON | 2 |
| kraytsberg | GPE | 2 |
| kreyszig | ORG | 2 |
| lc-ms/ms | ORG | 2 |
| lsf | ORG | 2 |
| khoury | GPE | 2 |
| lopez-vaamonde | PERSON | 2 |
| light ( | ORG | 2 |
| lister | GPE | 2 |
| liu t | PERSON | 2 |
| liu y | PERSON | 2 |
| loas | ORG | 2 |
| lombardi | ORG | 2 |
| longo | GPE | 2 |
| lu et al | PERSON | 2 |
| lusc ccn | ORG | 2 |
| lyse reduce alkylate digest | ORG | 2 |
| m. ( | GPE | 2 |
| m. a., | PERSON | 2 |
| m. b. yaffe | PERSON | 2 |
| m. belkin | PERSON | 2 |
| m. c. et al | GPE | 2 |
| m. e. ( | PERSON | 2 |
| li z | PERSON | 2 |
| li s | GPE | 2 |
| lengyel | GPE | 2 |
| lein | ORG | 2 |
| lv ef | ORG | 2 |
| labelcapsule | ORG | 2 |
| laird | PERSON | 2 |
| lancet | ORG | 2 |
| lanchantin | GPE | 2 |
| landmarks | PERSON | 2 |
| langfelder | GPE | 2 |
| larson | PERSON | 2 |
| lassmann | PERSON | 2 |
| leafcutter | ORG | 2 |
| lee jh | PERSON | 2 |
| lee et al | PERSON | 2 |
| leendertz | GPE | 2 |
| legendre | GPE | 2 |
| lehmann | GPE | 2 |
| kimmel | PERSON | 2 |
| khimulya | GPE | 2 |
| immunogenetics | ORG | 2 |
| j. s. | PERSON | 2 |
| j. g. | PERSON | 2 |
| j. k. lim | PERSON | 2 |
| j. k. millet | PERSON | 2 |
| j. kalpathy-cramer | PERSON | 2 |
| j. m., | PERSON | 2 |
| j. monod | PERSON | 2 |
| j. pathol | PERSON | 2 |
| j. s. stumhofer | PERSON | 2 |
| jelcic | PERSON | 2 |
| j. yuan | PERSON | 2 |
| j. zhang | PERSON | 2 |
| j.e.l.b. | GPE | 2 |
| j.m. | GPE | 2 |
| jb | PERSON | 2 |
| je | GPE | 2 |
| jmd | ORG | 2 |
| j. feng | PERSON | 2 |
| j. f. w. chan | PERSON | 2 |
| j. d. reeves | PERSON | 2 |
| j. cox | PERSON | 2 |
| immune | GPE | 2 |
| imperial college london | ORG | 2 |
| institut | ORG | 2 |
| institute of mit | ORG | 2 |
| intronic snv | ORG | 2 |
| iorio | ORG | 2 |
| isaac turner | PERSON | 2 |
| isensee | GPE | 2 |
| isl1 | ORG | 2 |
| iwasaki y | PERSON | 2 |
| j-r. lin | PERSON | 2 |
| j-y. | PERSON | 2 |
| j. biol | PERSON | 2 |
| j. c. marioni | PERSON | 2 |
| j. chen | PERSON | 2 |
| jan o. korbel | PERSON | 2 |
| jhong jh | PERSON | 2 |
| keller pj | PERSON | 2 |
| kahles | PERSON | 2 |
| k. totsuka | PERSON | 2 |
| k. y. yuen | PERSON | 2 |
| k.r. | GPE | 2 |
| k12 e. | PERSON | 2 |
| kirp | ORG | 2 |
| kras mutant | ORG | 2 |
| kaestner | ORG | 2 |
| kamat et al | PERSON | 2 |
| jie shen et | PERSON | 2 |
| kanata et al | PERSON | 2 |
| kang | ORG | 2 |
| kao hj | PERSON | 2 |
| kaplan meier | PERSON | 2 |
| karolinska institutet | PERSON | 2 |
| karolinska university hospital | ORG | 2 |
| keller | PERSON | 2 |
| k. s. rhode | PERSON | 2 |
| k. rhode | PERSON | 2 |
| k. oishi | PERSON | 2 |
| k. nieselt | PERSON | 2 |
| jodoin | GPE | 2 |
| john huddleston | PERSON | 2 |
| jordan m. eizenga | PERSON | 2 |
| jost | PERSON | 2 |
| jouni sirΓ©n | PERSON | 2 |
| journal of cardiovascular magnetic resonance | ORG | 2 |
| journal of ecology | ORG | 2 |
| journal of statistical software | ORG | 2 |
| jukes-cantor | ORG | 2 |
| k. c. garcia | PERSON | 2 |
| k. fung | PERSON | 2 |
| k. h. maier-hein | PERSON | 2 |
| k. he | PERSON | 2 |
| k. m., | PERSON | 2 |
| k. mcleod | PERSON | 2 |
| ethics | ORG | 2 |
| complexheatmap | ORG | 2 |
| essentialless essential m ore | ORG | 2 |
| benjamini-hochberg fdr | ORG | 2 |
| barth | ORG | 2 |
| bartoszewicz et al | PERSON | 2 |
| bausch-fluck | ORG | 2 |
| beckman coulter | PERSON | 2 |
| bellot | ORG | 2 |
| ben-david | PERSON | 2 |
| benjamini | PERSON | 2 |
| berkeley | GPE | 2 |
| bishop kn | PERSON | 2 |
| berman hm | ORG | 2 |
| bharti | PERSON | 2 |
| bhat tn | PERSON | 2 |
| biochimica | GPE | 2 |
| biological sciences | ORG | 2 |
| biophysica acta | PERSON | 2 |
| bioproducts innovation | ORG | 2 |
| barabΓ‘si al | PERSON | 2 |
| barabasi | GPE | 2 |
| baldwin pr | GPE | 2 |
| bailey tl | PERSON | 2 |
| b.l. | GPE | 2 |
| b.m. | GPE | 2 |
| b.t. | PERSON | 2 |
| b48 | ORG | 2 |
| bba | ORG | 2 |
| bd biosciences | ORG | 2 |
| bibm | ORG | 2 |
| bmc bioinforma | ORG | 2 |
| bmc med | PERSON | 2 |
| bmc medical genomics | ORG | 2 |
| bp | ORG | 2 |
| bwa | ORG | 2 |
| backus | ORG | 2 |
| backus jw | PERSON | 2 |
| bai | GPE | 2 |
| biotechnol.β β32β | PERSON | 2 |
| biswas | GPE | 2 |
| b. tenenbaum | PERSON | 2 |
| c.d. | GPE | 2 |
| c. a. et al | PERSON | 2 |
| c. e. | PERSON | 2 |
| c. m. | PERSON | 2 |
| c. m. sharma | PERSON | 2 |
| c. nguyen | PERSON | 2 |
| c. y. cheung | PERSON | 2 |
| c.b. | GPE | 2 |
| c.j. | GPE | 2 |
| bodmer | GPE | 2 |
| c6666 | ORG | 2 |
| c8h17no8s | ORG | 2 |
| cd16+ monocytes | ORG | 2 |
| cigar | ORG | 2 |
| cmap | ORG | 2 |
| cmake | ORG | 2 |
| cnnall | ORG | 2 |
| buske | GPE | 2 |
| burant cf | ORG | 2 |
| buettner | PERSON | 2 |
| budzinska ma | ORG | 2 |
| bona | PERSON | 2 |
| bonder | GPE | 2 |
| bonferroni | PERSON | 2 |
| boomen | PERSON | 2 |
| boterenbrood | GPE | 2 |
| boulesteix | GPE | 2 |
| bowtie 2 | ORG | 2 |
| boyd | PERSON | 2 |
| boyd 2014 | PERSON | 2 |
| brandenburg | GPE | 2 |
| branson k | ORG | 2 |
| braun re | GPE | 2 |
| briefings | GPE | 2 |
| british journal of cancer | ORG | 2 |
| bryan | PERSON | 2 |
| b. yu | PERSON | 2 |
| b. t. | PERSON | 2 |
| erik garrison | PERSON | 2 |
| aac | ORG | 2 |
| a. prakosa | PERSON | 2 |
| a. t. et al | PERSON | 2 |
| a.e. | GPE | 2 |
| a.l. | GPE | 2 |
| a.m. | GPE | 2 |
| a.p. | GPE | 2 |
| a.t. | GPE | 2 |
| abc | ORG | 2 |
| atac | ORG | 2 |
| acc | ORG | 2 |
| acknowledgements | ORG | 2 |
| adam | GPE | 2 |
| af-18x v1.1-30x | PERSON | 2 |
| ai | GPE | 2 |
| amp | ORG | 2 |
| apobec | PERSON | 2 |
| a. l. | PERSON | 2 |
| a. kirchhofer et al. | PERSON | 2 |
| a. j. rennekamp | PERSON | 2 |
| a. hennemuth | PERSON | 2 |
| m. hein | PERSON | 2 |
| & schmera | ORG | 2 |
| /2 | ORG | 2 |
| 10x genomics | ORG | 2 |
| 128Γ128Γ16 | ORG | 2 |
| 2016;10 suppl 1(suppl | ORG | 2 |
| 2π1π β | PERSON | 2 |
| 2π3π β | PERSON | 2 |
| 3(1 | GPE | 2 |
| 4.3.1 | ORG | 2 |
| 7(1 | GPE | 2 |
| 8(3 | ORG | 2 |
| 84β87 | GPE | 2 |
| a. e. et al | PERSON | 2 |
| a. f. frangi | PERSON | 2 |
| at1g64140 | GPE | 2 |
| aupr rec | PERSON | 2 |
| b. r. rosen | PERSON | 2 |
| astrazeneca | ORG | 2 |
| arlington | GPE | 2 |
| arnt | GPE | 2 |
| artemisia | GPE | 2 |
| asakura | ORG | 2 |
| ashkenazi jewish | PERSON | 2 |
| ashley d. sanders | PERSON | 2 |
| asn | PERSON | 2 |
| atf1 | GPE | 2 |
| az | ORG | 2 |
| athinoula a. martinos | PERSON | 2 |
| audano | PERSON | 2 |
| avsec | ORG | 2 |
| aΜ cΞ± rmsd | GPE | 2 |
| b. e. nilsson-payant | PERSON | 2 |
| b. j. | PERSON | 2 |
| b. j., | PERSON | 2 |
| arginine | GPE | 2 |
| appendix | GPE | 2 |
| apolipoprotein b mrna | PERSON | 2 |
| andromeda | ORG | 2 |
| abasy atlas | PERSON | 2 |
| accutase | PERSON | 2 |
| acta crystallogr d struct biol | PERSON | 2 |
| adil | ORG | 2 |
| adv exp med biol 924 | PERSON | 2 |
| adverse drug reactions | ORG | 2 |
| afshar | GPE | 2 |
| ahlgren na | ORG | 2 |
| alanine | ORG | 2 |
| alicia oshlack | PERSON | 2 |
| alipanahi | ORG | 2 |
| alley | ORG | 2 |
| american association for the advancement of science section: report | ORG | 2 |
| amir et al | PERSON | 2 |
| andhra pradesh | GPE | 2 |
| corum | ORG | 2 |
| coup-tfii | ORG | 2 |
| covid | ORG | 2 |
| dijamco | ORG | 2 |
| densenet | ORG | 2 |
| department of chemistry | ORG | 2 |
| department of medical oncology | ORG | 2 |
| department of medicine | ORG | 2 |
| department of surgery | ORG | 2 |
| di | ORG | 2 |
| diagnosis | GPE | 2 |
| ding | PERSON | 2 |
| duchi | ORG | 2 |
| ding l | PERSON | 2 |
| diptera | PERSON | 2 |
| disco | ORG | 2 |
| discrete & computational geometry | ORG | 2 |
| doluca | PERSON | 2 |
| driscoll dm | ORG | 2 |
| drug discov | PERSON | 2 |
| denmark | GPE | 2 |
| dengue | GPE | 2 |
| deng | PERSON | 2 |
| delhi | GPE | 2 |
| d31 | ORG | 2 |
| dbscan | ORG | 2 |
| discussion | ORG | 2 |
| dminda | PERSON | 2 |
| door | PERSON | 2 |
| dp | GPE | 2 |
| dry | ORG | 2 |
| dale | PERSON | 2 |
| dana-farber cancer institute | ORG | 2 |
| david | PERSON | 2 |
| davis | GPE | 2 |
| de bello et al | PERSON | 2 |
| depristo | ORG | 2 |
| deeplift | ORG | 2 |
| deepubi | ORG | 2 |
| drug discovery | PERSON | 2 |
| dundee | GPE | 2 |
| csk | ORG | 2 |
| elbrecht | ORG | 2 |
| ena | ORG | 2 |
| encode | GPE | 2 |
| eot | ORG | 2 |
| earth | LOC | 2 |
| ebler | ORG | 2 |
| eddy sr | PERSON | 2 |
| egelman eh | PERSON | 2 |
| elbrecht et al | PERSON | 2 |
| durbin | GPE | 2 |
| electrical and computer engineering | ORG | 2 |
| england | GPE | 2 |
| ensembl 2020 | PERSON | 2 |
| epstein-barr | ORG | 2 |
| eqs | ORG | 2 |
| erdos-renyi | PERSON | 2 |
| eric t. dawson | PERSON | 2 |
| embl barcelona | PERSON | 2 |
| embl | ORG | 2 |
| eic | ORG | 2 |
| ebf1 | ORG | 2 |
| dutilh | PERSON | 2 |
| dutilh be | PERSON | 2 |
| e. a. | PERSON | 2 |
| e. c. | PERSON | 2 |
| e. e. | PERSON | 2 |
| e. e. moore | PERSON | 2 |
| e. konukoglu | PERSON | 2 |
| e. l. | PERSON | 2 |
| e. m. et al | PERSON | 2 |
| e. nagel | PERSON | 2 |
| e. papalexi | PERSON | 2 |
| e. r., | PERSON | 2 |
| e. s. et al | PERSON | 2 |
| e.s. | GPE | 2 |
| e37k | PERSON | 2 |
| d/a/nda | ORG | 2 |
| d.w. | GPE | 2 |
| d.m.e. | ORG | 2 |
| chaisson et al | ORG | 2 |
| cassie gregson | PERSON | 2 |
| cell host & microbe | ORG | 2 |
| center for molecular medicine | ORG | 2 |
| cervical | ORG | 2 |
| chabner | ORG | 2 |
| chain | GPE | 2 |
| chaisson | ORG | 2 |
| chan | PERSON | 2 |
| d. sachs | ORG | 2 |
| chemistry | ORG | 2 |
| chemotherapy | PERSON | 2 |
| chen sh | PERSON | 2 |
| chen xs | PERSON | 2 |
| chi2 | GPE | 2 |
| chin | PERSON | 2 |
| chinese academy of sciences | ORG | 2 |
| casado | GPE | 2 |
| carroll | ORG | 2 |
| care surg | PERSON | 2 |
| cardiovascular imaging | ORG | 2 |
| cttn | ORG | 2 |
| cvpr | ORG | 2 |
| cai | PERSON | 2 |
| callahan et al | PERSON | 2 |
| calu3 | GPE | 2 |
| camacho | ORG | 2 |
| campisi | ORG | 2 |
| candi | PERSON | 2 |
| cancer cell | PERSON | 2 |
| cancer discov | PERSON | 2 |
| cancer research | ORG | 2 |
| cancer de lille | PERSON | 2 |
| cao | ORG | 2 |
| caps-ubi | ORG | 2 |
| carbamazepine | PERSON | 2 |
| chlamydia | GPE | 2 |
| choobdar s | PERSON | 2 |
| chou | PERSON | 2 |
| craig | PERSON | 2 |
| cryo-em | ORG | 2 |
| cstem | ORG | 2 |
| d''alonzo | ORG | 2 |
| d. a. weitz | PERSON | 2 |
| d. bru | PERSON | 2 |
| d. c., | GPE | 2 |
| d. erdogmus | PERSON | 2 |
| d. harari | PERSON | 2 |
| d. hoagland | GPE | 2 |
| d. j. | PERSON | 2 |
| d. k. | PERSON | 2 |
| d. kim | PERSON | 2 |
| d. l. | PERSON | 2 |
| d. m. | PERSON | 2 |
| d. r. | PERSON | 2 |
| craig hm | PERSON | 2 |
| cox | ORG | 2 |
| christie | ORG | 2 |
| corvallis | GPE | 2 |
| christopher rackauckas | PERSON | 2 |
| chroma | ORG | 2 |
| chromatin | PERSON | 2 |
| church | ORG | 2 |
| clarke & warwick | ORG | 2 |
| clin cancer res 23 | PERSON | 2 |
| cov | ORG | 2 |
| collins | ORG | 2 |
| columbia university press | ORG | 2 |
| computational | ORG | 2 |
| computer science | ORG | 2 |
| consensus | ORG | 2 |
| convert | PERSON | 2 |
| convolutional neural network | ORG | 2 |
| corrie | PERSON | 2 |
| m. f. | PERSON | 2 |
| londoΓ±o-vallejo | PERSON | 2 |
| m. hoffmann | PERSON | 2 |
| viraminer | ORG | 2 |
| variational autoencoder | PERSON | 2 |
| variola virus | PERSON | 2 |
| veesler | ORG | 2 |
| veridical21,22 | GPE | 2 |
| viguera | GPE | 2 |
| villΓ©ger | GPE | 2 |
| vineet bafna | PERSON | 2 |
| virginia polytechnic institute | ORG | 2 |
| wa | ORG | 2 |
| w. bai | PERSON | 2 |
| w. chen | PERSON | 2 |
| w. f., lim | PERSON | 2 |
| w. luk | PERSON | 2 |
| w. m. chan | PERSON | 2 |
| w. s., | PERSON | 2 |
| w188 g68 | PERSON | 2 |
| variational | PERSON | 2 |
| valencak | GPE | 2 |
| vhdb | GPE | 2 |
| vaf | ORG | 2 |
| ubiprober | ORG | 2 |
| university of california los angeles | ORG | 2 |
| university of california-berkeley | ORG | 2 |
| university of connecticut health center | ORG | 2 |
| university of guelph | ORG | 2 |
| university of leicester | ORG | 2 |
| university of toronto | ORG | 2 |
| unlike k11777 | PERSON | 2 |
| usf2 | ORG | 2 |
| v. de silva | PERSON | 2 |
| v. n. | PERSON | 2 |
| v. poli | PERSON | 2 |
| v.t. | PERSON | 2 |
| vae-2 | GPE | 2 |
| vae-3 | GPE | 2 |
| w192 q18 q147 | PERSON | 2 |
| wbc | ORG | 2 |
| ucec gemms | ORG | 2 |
| x. f. su | PERSON | 2 |
| wieser | GPE | 2 |
| wilkinson 2019 | ORG | 2 |
| wirta | GPE | 2 |
| wittbrodt | GPE | 2 |
| wright | PERSON | 2 |
| wu et al | PERSON | 2 |
| wynne jk | PERSON | 2 |
| x. liang | PERSON | 2 |
| who | ORG | 2 |
| x. mao | PERSON | 2 |
| x. xu | PERSON | 2 |
| x. zhuang | PERSON | 2 |
| xs | ORG | 2 |
| xxxxx | ORG | 2 |
| xia | PERSON | 2 |
| xiamen ylz yihui technology co. | ORG | 2 |
| whitney u | PERSON | 2 |
| westbrook j | PERSON | 2 |
| west nile | GPE | 2 |
| werner ceusters | PERSON | 2 |
| wald | ORG | 2 |
| wang 2020 | PERSON | 2 |
| wang b | PERSON | 2 |
| wang w | PERSON | 2 |
| wang et al | PERSON | 2 |
| watson | PERSON | 2 |
| watt | PERSON | 2 |
| way and greene | ORG | 2 |
| wei | PERSON | 2 |
| weissig h | GPE | 2 |
| wellcome trust case control consortium | ORG | 2 |
| welling | GPE | 2 |
| wen | PERSON | 2 |
| wendell d jones | PERSON | 2 |
| weng sl | PERSON | 2 |
| uhrr | ORG | 2 |
| u. et al | PERSON | 2 |
| xie y | PERSON | 2 |
| t. x. jordan | PERSON | 2 |
| supplementary.pdf | PERSON | 2 |
| symmetry | ORG | 2 |
| systematic | LOC | 2 |
| t. bischler | PERSON | 2 |
| t. kishimoto | PERSON | 2 |
| t. l. & hart | ORG | 2 |
| t. m. | PERSON | 2 |
| t.j. | GPE | 2 |
| tttccattccattccag | ORG | 2 |
| t69 m70 | PERSON | 2 |
| tb | ORG | 2 |
| thca | ORG | 2 |
| thr | ORG | 2 |
| tmprss2 | GPE | 2 |
| tn | ORG | 2 |
| tsv | ORG | 2 |
| supplementary fig | PERSON | 2 |
| supp tab 2 | PERSON | 2 |
| subset | GPE | 2 |
| subread | ORG | 2 |
| smith institute | ORG | 2 |
| smith et al | ORG | 2 |
| snail1 | GPE | 2 |
| solomon | PERSON | 2 |
| sonawane | GPE | 2 |
| springer | PERSON | 2 |
| springer berlin heidelberg | PERSON | 2 |
| steinke | ORG | 2 |
| sterling cr | GPE | 2 |
| stevens | PERSON | 2 |
| stewart | GPE | 2 |
| stockholm | GPE | 2 |
| strobl et al | PERSON | 2 |
| su mg | PERSON | 2 |
| sum | ORG | 2 |
| tttcca | ORG | 2 |
| tu | ORG | 2 |
| tyner c et al | ORG | 2 |
| treecluster | ORG | 2 |
| tobias marschall | PERSON | 2 |
| tomasoni m | PERSON | 2 |
| tony | PERSON | 2 |
| tophat231 | ORG | 2 |
| toren | ORG | 2 |
| tortorici | PERSON | 2 |
| tradidiss.gc.even | ORG | 2 |
| tripgq- | ORG | 2 |
| table 3 | LOC | 2 |
| triplex | PERSON | 2 |
| tsherniak | ORG | 2 |
| tu t | PERSON | 2 |
| turkey | GPE | 2 |
| turnbull | ORG | 2 |
| turner | GPE | 2 |
| tyler | GPE | 2 |
| tissueenrich | ORG | 2 |
| time-lagged data analysis | ORG | 2 |
| time | ORG | 2 |
| tibshirani et al | PERSON | 2 |
| tandem | ORG | 2 |
| tang | PERSON | 2 |
| tbx5 | GPE | 2 |
| telenti | GPE | 2 |
| teng et al | PERSON | 2 |
| testicular germ cell tumors | ORG | 2 |
| thailand | GPE | 2 |
| the american journal of human genetics | ORG | 2 |
| the genotype-tissue expression | ORG | 2 |
| the map | PERSON | 2 |
| the microarray quality control | ORG | 2 |
| the national academies press | ORG | 2 |
| the protein data bank | ORG | 2 |
| thermo-scientific | ORG | 2 |
| thomas willems | PERSON | 2 |
| xie | PERSON | 2 |
| xiong | GPE | 2 |
| sjk | PERSON | 2 |
| the american college of rheumatology | ORG | 2 |
| regtools.org | ORG | 2 |
| rerio data | ORG | 2 |
| rsio n | ORG | 2 |
| sgrnas | LOC | 2 |
| splicing_exonic | ORG | 2 |
| statsmodel.api | ORG | 2 |
| td | GPE | 2 |
| the cancer cell line encyclopedia | ORG | 2 |
| thiamine+c4h8o | PERSON | 2 |
| the european nucleotide archive | ORG | 2 |
| the international committee on taxonomy of viruses | ORG | 2 |
| the laplace-beltrami | ORG | 2 |
| the national natural science foundation of china | ORG | 2 |
| the royal society b | ORG | 2 |
| the sars-cov-2 | ORG | 2 |
| the wellcome trust | ORG | 2 |
| r=-0.14 | GPE | 2 |
| quadratic | PERSON | 2 |
| python statsmodel v0.10.1 | ORG | 2 |
| preprint https://doi.org/10.1101/2021.01.06.425581 | PERSON | 2 |
| metabarcode data | ORG | 2 |
| min π¨,{βπΊπ}π=1 | PERSON | 2 |
| min-max | PERSON | 2 |
| mitochondria | GPE | 2 |
| ml l-arginine | PERSON | 2 |
| multiplets | PERSON | 2 |
| n | PERSON | 2 |
| n.d | ORG | 2 |
| n.d. | GPE | 2 |
| n=386 | PERSON | 2 |
| no lo | PERSON | 2 |
| node u | PERSON | 2 |
| org | ORG | 2 |
| preprint https://doi.org/10.1101/2021.01.05.425414 http://creativecommons.org/licenses/by-nc-nd/4.0/ | PERSON | 2 |
| preprint https://doi.org/10.1101/2021.01.05.425508 | PERSON | 2 |
| therapy_type | ORG | 2 |
| tia l m | PERSON | 2 |
| maxdepth | ORG | 2 |
| πππ’ππ π‘π | PERSON | 2 |
| β πΊ β | PERSON | 2 |
| β π½βπΉ 2 | PERSON | 2 |
| β π½23[ππ | PERSON | 2 |
| β10.0 β7.5 β5.0 | GPE | 2 |
| βπ1,6 | PERSON | 2 |
| ππ ππππ | GPE | 2 |
| π1[ππ1 | PERSON | 2 |
| π$% | PERSON | 2 |
| time | ORG | 2 |
| πβ1 | ORG | 2 |
| π[π+ | ORG | 2 |
| π1,6 β | PERSON | 2 |
| π π‘ππ‘π’π xih | PERSON | 2 |
| π―π π π―π + πΎπͺ1 π πͺ1 | PERSON | 2 |
| π«fret | GPE | 2 |
| m. huang | PERSON | 2 |
| β πͺ3 | PERSON | 2 |
| β π),- | PERSON | 2 |
| β π3[ππ3 | PERSON | 2 |
| β π1[ππ1 | PERSON | 2 |
| ty lin | PERSON | 2 |
| versus x(t+21 | PERSON | 2 |
| vii | ORG | 2 |
| wcΞ± | ORG | 2 |
| wt chimera | PERSON | 2 |
| wuhan | GPE | 2 |
| x(t)/x(t+7)/x(t+14 | GPE | 2 |
| x(t+14 | PERSON | 2 |
| | biorΟiv hu | PERSON | 2 |
| ~200 | ORG | 2 |
| βdrosophila | GPE | 2 |
| βbiorxivβ | ORG | 2 |
| βab->bna | ORG | 2 |
| β2,1 | ORG | 2 |
| β 2π3π | PERSON | 2 |
| maximal atu | ORG | 2 |
| malepatidsdf$patid | ORG | 2 |
| xu c | PERSON | 2 |
| zhang j | PERSON | 2 |
| z. lu | PERSON | 2 |
| z. zhou | PERSON | 2 |
| zfx | GPE | 2 |
| zac1 | PERSON | 2 |
| zenklusen | GPE | 2 |
| zhang b | PERSON | 2 |
| zhang c | PERSON | 2 |
| zhang y | PERSON | 2 |
| a cΞ± rmsd | PERSON | 2 |
| zhang z | PERSON | 2 |
| zhenqiang su | PERSON | 2 |
| zhong | GPE | 2 |
| zhou q | PERSON | 2 |
| zhou et al. | PERSON | 2 |
| zika | GPE | 2 |
| zizka et al | PERSON | 2 |
| z. hong | PERSON | 2 |
| z. gao | PERSON | 2 |
| yunshun chen | PERSON | 2 |
| yue | ORG | 2 |
| xu et al | PERSON | 2 |
| xue | PERSON | 2 |
| y | GPE | 2 |
| y. chen | PERSON | 2 |
| y. hu | PERSON | 2 |
| y. huang | PERSON | 2 |
| y. i. et al | PERSON | 2 |
| y. zhu | PERSON | 2 |
| y. ruckeri | PERSON | 2 |
| y.-h. | GPE | 2 |
| y.-m. | GPE | 2 |
| yi | ORG | 2 |
| yif1b | PERSON | 2 |
| ye w | PERSON | 2 |
| yi | PERSON | 2 |
| zou | PERSON | 2 |
| a klein bottle embedding | ORG | 2 |
| loop | GPE | 2 |
| http://paperpile.com/b/bnwyax/dctjj | ORG | 2 |
| estrogen | ORG | 2 |
| et al. | PERSON | 2 |
| fed | ORG | 2 |
| firstdf | ORG | 2 |
| furin | ORG | 2 |
| genesβ11β | ORG | 2 |
| hkij | GPE | 2 |
| http://paperpile.com/b/bnwyax/f4tt0 | ORG | 2 |
| a. edwards et al | ORG | 2 |
| http://paperpile.com/b/h8ctd0/pgh4u http://paperpile.com/b/h8ctd0/pgh4u | PERSON | 2 |
| https://paperpile.com/c/bnwyax/6uh1g | ORG | 2 |
| https://www.codecogs.com/eqnedit.php?latex=kmc_d#0 | PERSON | 2 |
| kb | PERSON | 2 |
| kΞ±ΜΞΈ | ORG | 2 |
| kΞ±ΞΈ | ORG | 2 |
| l. m fi | GPE | 2 |
| elegansβ | GPE | 2 |
| elegans | ORG | 2 |
| ed p | ORG | 2 |
| e2 | ORG | 2 |
| arc | GPE | 2 |
| agegrouplist | ORG | 2 |
| autoimmune | ORG | 2 |
| bhlhe40 | GPE | 2 |
| bhlhe41 | GPE | 2 |
| bioc | PERSON | 2 |
| biof | PERSON | 2 |
| biorΟiv hu | PERSON | 2 |
| buffer | PERSON | 2 |
| china | GPE | 2 |
| cutheight | ORG | 2 |
| cyan | PERSON | 2 |
| distinct atus | PERSON | 2 |
| dsimcom | ORG | 2 |
| e. a. | PERSON | 2 |
| smith hc | ORG | 2 |
| ππ | GPE | 2 |
| siteman cancer center | ORG | 2 |
| new england biolabs | ORG | 2 |
| navas | GPE | 2 |
| nawrocki ep | PERSON | 2 |
| nc | PERSON | 2 |
| ncalib | ORG | 2 |
| needhamsen | GPE | 2 |
| nematode | ORG | 2 |
| nestor ce | ORG | 2 |
| nie 2020 | PERSON | 2 |
| oc43 | ORG | 2 |
| nik-zainal s | ORG | 2 |
| nikola milosevic | PERSON | 2 |
| north india | LOC | 2 |
| novogene | PERSON | 2 |
| nround=2500 | GPE | 2 |
| nugent | GPE | 2 |
| numeric embryo | PERSON | 2 |
| navarro | GPE | 2 |
| navaratnam n | ORG | 2 |
| nature communications 11 | ORG | 2 |
| natural language processing | ORG | 2 |
| nbi | ORG | 2 |
| nc_009778 | ORG | 2 |
| nelfa | ORG | 2 |
| nist | ORG | 2 |
| nltk | ORG | 2 |
| nm | ORG | 2 |
| nod | ORG | 2 |
| nair | PERSON | 2 |
| nat biotechnol | PERSON | 2 |
| nat commun | PERSON | 2 |
| nat protoc 4 | PERSON | 2 |
| nat rev mol cell biol | PERSON | 2 |
| nat rev neurol | PERSON | 2 |
| nat struct mol biol 17 | PERSON | 2 |
| natl | ORG | 2 |
| nΟ | PERSON | 2 |
| ols | ORG | 2 |
| patch dataset | PERSON | 2 |
| pina | ORG | 2 |
| p. smibert | PERSON | 2 |
| p. t. | PERSON | 2 |
| p.j. | GPE | 2 |
| p.w. | GPE | 2 |
| pdmr | PERSON | 2 |
| phg | ORG | 2 |
| php | ORG | 2 |
| plat | ORG | 2 |
| ogawa | GPE | 2 |
| ppm1g | PERSON | 2 |
| pssm | ORG | 2 |
| pacbio | PERSON | 2 |
| pacbio sequel | GPE | 2 |
| packag | GPE | 2 |
| papamichalis | GPE | 2 |
| pareto | ORG | 2 |
| p. r. smith | PERSON | 2 |
| p. p. sengupta | PERSON | 2 |
| p. o. krutzik | PERSON | 2 |
| p. melsted | PERSON | 2 |
| oliver | PERSON | 2 |
| oncoradiomics | ORG | 2 |
| ontario | GPE | 2 |
| oregon | GPE | 2 |
| oregon state university | ORG | 2 |
| orton | GPE | 2 |
| oxford | ORG | 2 |
| oβbrien | ORG | 2 |
| p. bates | PERSON | 2 |
| p. c. heinrich | PERSON | 2 |
| p. chen | PERSON | 2 |
| p. hoffman | PERSON | 2 |
| p. j. | PERSON | 2 |
| p. m. full | PERSON | 2 |
| p. m., | PERSON | 2 |
| na12878 | GPE | 2 |
| n2024889 | GPE | 2 |
| n.k. | GPE | 2 |
| marie et al | PERSON | 2 |
| malik | GPE | 2 |
| mangan et al. | PERSON | 2 |
| mao | PERSON | 2 |
| marabita f | PERSON | 2 |
| marc carlson | PERSON | 2 |
| marco-sola | PERSON | 2 |
| maria nattestad | PERSON | 2 |
| maris et al | PERSON | 2 |
| n.a.-h. | GPE | 2 |
| mark d robinson | PERSON | 2 |
| mark diekhans | PERSON | 2 |
| marker | ORG | 2 |
| marschall | GPE | 2 |
| martin | GPE | 2 |
| martΓnek | GPE | 2 |
| maryland | GPE | 2 |
| maastricht | PERSON | 2 |
| ma | GPE | 2 |
| mtt | ORG | 2 |
| mnt | ORG | 2 |
| single | PERSON | 2 |
| m. panis | PERSON | 2 |
| m. perone-pacifico | PERSON | 2 |
| m. shi | PERSON | 2 |
| m. shih | PERSON | 2 |
| m.a. | GPE | 2 |
| m.e. | GPE | 2 |
| m.r. | GPE | 2 |
| m512293200 | PERSON | 2 |
| m9enrich_1 | GPE | 2 |
| m9enrich_2 | GPE | 2 |
| mainmast30 | GPE | 2 |
| maqc | ORG | 2 |
| mcode correl | PERSON | 2 |
| mh | ORG | 2 |
| marz | PERSON | 2 |
| massachusetts ave | GPE | 2 |
| material and methods | ORG | 2 |
| monocyte derived dendritic | ORG | 2 |
| morgan | ORG | 2 |
| mouchet | ORG | 2 |
| mouillot | GPE | 2 |
| mouliere | PERSON | 2 |
| muhanna | GPE | 2 |
| mutational | ORG | 2 |
| myeloid leukemia | PERSON | 2 |
| myers ew | ORG | 2 |
| n. a., | PERSON | 2 |
| n. ayache | PERSON | 2 |
| n. g. | PERSON | 2 |
| n. l. bray | PERSON | 2 |
| n. v. | PERSON | 2 |
| n. w. h. | PERSON | 2 |
| n. wang | PERSON | 2 |
| monte carlo | PERSON | 2 |
| molecular biology | ORG | 2 |
| matthew | PERSON | 2 |
| mix 1:1 | PERSON | 2 |
| mattick | GPE | 2 |
| mcdaniel | PERSON | 2 |
| mcdole k | PERSON | 2 |
| mcdonald | ORG | 2 |
| mclean | GPE | 2 |
| mehrdad | GPE | 2 |
| melissa | PERSON | 2 |
| mesothelioma | GPE | 2 |
| metab | ORG | 2 |
| metabolome-wide association studies | ORG | 2 |
| methods data | ORG | 2 |
| meyer | PERSON | 2 |
| meyer jr | PERSON | 2 |
| milli | ORG | 2 |
| mitoage | ORG | 2 |
| parker | ORG | 2 |
| m. l. yuan | PERSON | 2 |
| pavel a. pevzner | PERSON | 2 |
| s. sun | PERSON | 2 |
| s. neubauer | PERSON | 2 |
| s. ourselin | PERSON | 2 |
| s. pellegrini | PERSON | 2 |
| s. pflanz et al. | PERSON | 2 |
| s. pΓΆhlmann | PERSON | 2 |
| s. r. | PERSON | 2 |
| s. rose-john | PERSON | 2 |
| s. uhl | GPE | 2 |
| sarsr-cov ratg13 | ORG | 2 |
| s. wang | PERSON | 2 |
| s., colthurst | ORG | 2 |
| s.f. | GPE | 2 |
| s.l. | GPE | 2 |
| s11 | ORG | 2 |
| s13 | ORG | 2 |
| s1411 | PERSON | 2 |
| s. matalon | PERSON | 2 |
| s. m. | PERSON | 2 |
| s. l. et al | PERSON | 2 |
| s. l. salzberg | PERSON | 2 |
| robertson | PERSON | 2 |
| robitaille | GPE | 2 |
| roman petrovski | PERSON | 2 |
| rosetta | PERSON | 2 |
| rowell | ORG | 2 |
| royer la | PERSON | 2 |
| rubin | PERSON | 2 |
| s. e. petersen | PERSON | 2 |
| s. engelhardt | PERSON | 2 |
| s. horvath | PERSON | 2 |
| s. idell | PERSON | 2 |
| s. j. | PERSON | 2 |
| s. jiang | PERSON | 2 |
| s. k. piechnik | PERSON | 2 |
| s. l. | PERSON | 2 |
| s7a | GPE | 2 |
| sc3 | ORG | 2 |
| robert koch institute | ORG | 2 |
| sharp | ORG | 2 |
| seo et al | PERSON | 2 |
| seqtu | PERSON | 2 |
| sesame cor=0.96 | GPE | 2 |
| seurat v.3 | GPE | 2 |
| sewell | ORG | 2 |
| sharma | GPE | 2 |
| simon anders | PERSON | 2 |
| sheehy am | ORG | 2 |
| scnn1g (ο§enac | ORG | 2 |
| shen-orr | PERSON | 2 |
| shi et al | PERSON | 2 |
| shigella | ORG | 2 |
| shiina | GPE | 2 |
| shirley | PERSON | 2 |
| silva | GPE | 2 |
| pavoine | ORG | 2 |
| section nucleotide | ORG | 2 |
| seattle | GPE | 2 |
| scrublet9 | ORG | 2 |
| score | PERSON | 2 |
| sec | ORG | 2 |
| sf | GPE | 2 |
| sne | ORG | 2 |
| snn-cliq | ORG | 2 |
| srr10571724 | PERSON | 2 |
| star | ORG | 2 |
| salzberg | ORG | 2 |
| samples g | ORG | 2 |
| san diego | GPE | 2 |
| sanger | GPE | 2 |
| scaledata | ORG | 2 |
| schlessinger | PERSON | 2 |
| schmid mf | PERSON | 2 |
| schwartz | GPE | 2 |
| sci rep | PERSON | 2 |
| roberts et al | PERSON | 2 |
| s18 | ORG | 2 |
| robert hernandez | PERSON | 2 |
| q18 k19 | PERSON | 2 |
| protein data bank | ORG | 2 |
| pseudomonas | GPE | 2 |
| pten | ORG | 2 |
| pubmed central | LOC | 2 |
| q. jin | PERSON | 2 |
| q. zheng | PERSON | 2 |
| q147 v162 | PERSON | 2 |
| qi | PERSON | 2 |
| r. a., | PERSON | 2 |
| qiagen | ORG | 2 |
| qing nie | ORG | 2 |
| qiu | PERSON | 2 |
| quach | GPE | 2 |
| quantal | ORG | 2 |
| query data | ORG | 2 |
| r. a. albrecht | PERSON | 2 |
| protein | PERSON | 2 |
| proportionmethylation | ORG | 2 |
| proopdb | ORG | 2 |
| preslia | GPE | 2 |
| peaks | ORG | 2 |
| robert gentleman | PERSON | 2 |
| pei hao | PERSON | 2 |
| pellegrini, m. ( | ORG | 2 |
| peng | PERSON | 2 |
| pereira | ORG | 2 |
| peter krusche | PERSON | 2 |
| petersen-mahrt | ORG | 2 |
| philadelphia | GPE | 2 |
| physiol rev | ORG | 2 |
| plasmacytorid dendritic | ORG | 2 |
| potsdam | GPE | 2 |
| powell lm | PERSON | 2 |
| poznan | GPE | 2 |
| precision-recall | ORG | 2 |
| r. a. fouchier | PERSON | 2 |
| pseudo-bulk | PERSON | 2 |
| r. c. | PERSON | 2 |
| research publications | ORG | 2 |
| receptor | GPE | 2 |
| redon | ORG | 2 |
| reeve | PERSON | 2 |
| ref | ORG | 2 |
| regulondb | GPE | 2 |
| ren | ORG | 2 |
| repeatmasker | ORG | 2 |
| reson | ORG | 2 |
| read rj | GPE | 2 |
| retrieve | PERSON | 2 |
| richard yanicky | PERSON | 2 |
| richardson | PERSON | 2 |
| ricotta | PERSON | 2 |
| ricotta & burrascano | ORG | 2 |
| pavoine, s. & ricotta | ORG | 2 |
| rlkij(p | ORG | 2 |
| recall precision specificity accuracy | ORG | 2 |
| ricotta & podani | ORG | 2 |
| rayon-estrada et al | ORG | 2 |
| r3 | GPE | 2 |
| r. durbin | PERSON | 2 |
| rapid | ORG | 2 |
| r. eils | PERSON | 2 |
| r. m. et al | PERSON | 2 |
| r. tibshirani | PERSON | 2 |
| r. zhao | PERSON | 2 |
| r.h. | GPE | 2 |
| r. e. schwartz | PERSON | 2 |
| ram | ORG | 2 |
| rna-seq cra002390 | ORG | 2 |
| rakocevic et al | PERSON | 2 |
| raney | GPE | 2 |
| rao | PERSON | 2 |
| references | ORG | 2 |
| hdac | ORG | 1 |
| hgnc | ORG | 1 |
| hg02106 | PERSON | 1 |
| hg004 | ORG | 1 |
| hg002 | ORG | 1 |
| h2020 | GPE | 1 |
| hec-1b | ORG | 1 |
| hbrr | ORG | 1 |
| hck p-s1118 lrba p-y397 lyn p-s42 pask p-s553 | ORG | 1 |
| hck | ORG | 1 |
| hbd | ORG | 1 |
| hba | ORG | 1 |
| ha/h1n1 | ORG | 1 |
| h7 e. | PERSON | 1 |
| hi!-i | PERSON | 1 |
| h3n2 | ORG | 1 |
| hgsvc | ORG | 1 |
| hla class ii | ORG | 1 |
| hic1 | ORG | 1 |
| hisat | ORG | 1 |
| h164,g165 | GPE | 1 |
| hla-c locus | ORG | 1 |
| hla-c ddr1 slc29a1 itga3 | ORG | 1 |
| hla-b*1502 | ORG | 1 |
| hla-b*13:01 | PERSON | 1 |
| hla-b*1301 | ORG | 1 |
| hla-b association | ORG | 1 |
| hla-adr | ORG | 1 |
| hla association | ORG | 1 |
| hla allele association | ORG | 1 |
| hla matching | ORG | 1 |
| hla biomarker | ORG | 1 |
| hl87017 | GPE | 1 |
| hl134828 | GPE | 1 |
| hl | GPE | 1 |
| h1n1/09 | LOC | 1 |
| h. rigneault | PERSON | 1 |
| h164 t69 | PERSON | 1 |
| h. t. bittar | PERSON | 1 |
| h. w., | PERSON | 1 |
| h. v., | PERSON | 1 |