bigram

This is a table of type bigram and their frequencies. Use it to search & browse the list to learn more about your study carrel.

bigram	frequency
staphylococcus aureus	288
node length	256
length cov	256
virsorter node	256
cat virsorter	241
genome sequence	230
infectious bronchitis	226
clinical isolates	220
escherichia coli	207
amino acid	194
respiratory tract	175
clinical signs	174
bronchitis virus	156
lg ml	151
antibiotic resistance	150
resistant strains	141
complete genome	139
mg kg	134
sequence accession	131
strains isolated	129
infectious diseases	126
present study	121
mg ml	120
phylogenetic analysis	120
antimicrobial agents	117
pseudomonas aeruginosa	110
laboratory mice	109
susceptibility testing	103
vitro activity	102
infected mice	102
ibv strains	99
streptococcus pneumoniae	99
antimicrobial resistance	99
closely related	97
performed using	96
blood cultures	95
intensive care	95
risk factors	93
immunodeficient mice	90
ck ch	89
urinary tract	89
amino acids	88
tract infections	88
immune response	87
time pcr	85
virus infection	84
mcg ml	84
chain reaction	83
resistance genes	80
clostridium difficile	80
litter size	79
gene expression	79
polymerase chain	79
resistant staphylococcus	79
agar dilution	78
gel electrophoresis	78
united states	77
public health	74
antibiotic treatment	73
mean age	73
disk diffusion	73
hepatitis virus	72
antibiotic therapy	71
immune system	70
control group	70
cell lines	69
cfu ml	69
sequence analysis	68
results showed	68
mic values	68
significant differences	67
negative bacteria	65
broth microdilution	64
resistant isolates	64
antimicrobial susceptibility	64
strain srs	64
spinal cord	64
clinical trials	64
immune responses	63
lymph nodes	63
mouse hepatitis	63
determined using	62
infection control	62
laboratory animal	62
genetic diversity	62
two strains	62
blood culture	61
immunocompetent mice	60
three different	59
avian infectious	59
broad spectrum	58
pcr assay	58
infections caused	58
statistically significant	58
commonly used	57
bone marrow	57
blood samples	57
infectious disease	57
drug resistance	57
bactericidal activity	56
significant difference	56
year period	56
mic mg	55
nervous system	55
mrsa isolates	55
two different	55
care unit	55
may occur	55
lactic acid	55
differential diagnosis	55
university hospital	54
scid mice	54
probiotic strains	53
important role	52
results obtained	52
mouse colonies	52
diffusion method	52
previously described	52
clavulanic acid	52
research complications	52
soft tissue	52
agar plates	51
antibiotic susceptibility	51
reduced susceptibility	51
dilution method	51
etec strains	50
study period	50
antimicrobial therapy	50
mice infected	50
negative staphylococci	50
mice may	50
genome sequences	50
sendai virus	50
adverse events	50
minute virus	49
mrsa strains	49
adult mice	49
field gel	49
viral load	49
rrna gene	49
nosocomial infections	49
cell culture	49
airway caliber	49
klebsiella pneumoniae	48
experimental infection	48
may also	48
draft genome	48
recombination events	48
asm strain	48
tract infection	48
recent years	48
porcine epidemic	48
one patient	48
central nervous	48
virulence factors	48
clinical disease	47
nrtw i	47
lymphocytic choriomeningitis	47
helicobacter pylori	47
resistance rates	47
log cfu	47
significantly higher	47
clinical microbiology	47
two groups	47
animal medicine	46
last years	46
chemical engineering	46
results suggest	46
susceptible strains	46
macrolide resistance	46
mouse strains	46
airway wall	46
clinical samples	45
doc id	45
one hundred	45
bacillus subtilis	45
lung volume	45
cell wall	45
antibacterial activity	45
antibiotic use	45
viral rna	45
cord uid	45
nccls guidelines	44
years old	44
high level	44
epidemic diarrhea	44
inbred strains	44
pcr assays	43
epithelial cells	43
species level	43
drug resistant	43
reference strains	43
herpes simplex	43
bl mice	43
heavy metal	42
mortality rate	42
genes encoding	42
positive bacteria	42
smooth muscle	42
aureus isolates	42
spectrum beta	42
blood agar	41
choriomeningitis virus	41
additional file	41
wide range	41
gross lesions	41
piperacillin tazobactam	41
high prevalence	41
least one	40
patients received	40
aureus strains	40
multiplex pcr	40
virus strain	40
nucleotide sequence	40
hospitalized patients	40
auc mic	39
large number	39
per patient	39
bacterial meningitis	39
viral infections	39
generation cephalosporins	39
lower respiratory	39
candida spp	39
interspecies transmission	39
bacterial pathogens	39
innate immune	39
antimicrobial activity	39
healthy volunteers	39
inhibitory concentration	39
vaccine strain	38
gram negative	38
pcr products	38
diarrhea virus	38
type strains	38
plasmodium falciparum	38
positive strains	38
drinking water	38
pk pd	38
saccharomyces cerevisiae	38
bacterial strains	38
results indicate	38
lactate dehydrogenase	38
molecular epidemiology	38
coli strains	37
pregnant women	37
widely used	37
enterococcus faecalis	37
health care	37
clinical strains	37
small intestine	37
bacterial infections	37
strains showed	37
resistance among	37
genomic dna	37
gastrointestinal tract	37
nucleic acid	36
acquired pneumonia	36
growth rate	36
viral replication	36
coding region	36
multiple sclerosis	36
recombinant proteins	36
carbon source	36
one case	36
haemophilus influenzae	36
cell cultures	36
one isolate	36
tissue infections	36
positive samples	35
wild type	35
respiratory disease	35
results show	35
cell line	35
two patients	35
ch lhlj	35
well tolerated	35
high mortality	35
simplex virus	35
laboratory rats	35
three strains	35
reference strain	35
respiratory infections	35
acute respiratory	35
genome sequencing	34
mass spectrometry	34
antiviral activity	34
strain hun	34
anaerobic bacteria	34
i strain	34
serum samples	34
natural infection	34
pneumoniae isolates	34
patients treated	34
may develop	33
molecular typing	33
citric acid	33
upper respiratory	33
laboratory mouse	33
quinupristin dalfopristin	33
age group	33
also found	33
persistent infection	33
clinical specimens	33
molecular biology	33
risk factor	33
minimum inhibitory	33
cerebrospinal fluid	33
acinetobacter baumannii	33
strains belonging	33
technical university	33
microdilution method	33
infant mice	33
virulence genes	33
north america	32
canine astvs	32
stool samples	32
water buffalo	32
phylogenetic tree	32
type i	32
patients receiving	32
whole genome	32
gene sequence	32
infected animals	32
metabolic engineering	32
coli isolates	32
pcr amplification	32
one strain	32
species identification	32
different strains	32
molecular characterization	32
phylogenetic trees	32
commercially available	32
direct contact	32
ectromelia virus	32
dm strain	31
per cent	31
hospital stay	31
mouse strain	31
resistant bacteria	31
teaching hospital	31
faecal samples	31
naturally occurring	31
acid production	31
respiratory syndrome	31
analysis showed	31
two isolates	31
positive blood	31
data suggest	31
clinical trial	31
quality control	30
fecal samples	30
study showed	30
biofilm formation	30
animal models	30
salmonella spp	30
experimentally infected	30
inbred strain	30
three patients	30
murine norovirus	30
infections due	30
resistance determinants	30
klebsiella spp	30
methicillin resistant	30
mg bid	29
viral infection	29
fermentation process	29
reverse transcriptase	29
infected patients	29
total number	29
spike gene	29
airway smooth	29
extended spectrum	29
deep inspiration	29
time points	29
wild mice	29
serratia marcescens	29
acinetobacter spp	29
strain i	29
biological materials	29
virus type	29
life cycle	28
canine coronavirus	28
collaborative cross	28
clinical studies	28
serological tests	28
previous studies	28
recombinant protein	28
enterococcus spp	28
hospitalised patients	28
patients admitted	28
real time	28
antibiotics tested	28
mouse model	28
cystic fibrosis	28
vaccine strains	28
disease virus	28
european countries	28
stem cells	28
candida species	28
virus strains	27
infectious agents	27
ankara university	27
molecular methods	27
several studies	27
embryo transfer	27
middle ear	27
nucleotide sequences	27
acid sequences	27
analysis revealed	27
negative bacilli	27
bacterial infection	27
mic mic	27
gene encoding	27
genes involved	27
oxygen transfer	27
three groups	27
resistance phenotypes	27
internal medicine	27
causative agent	27
differentially expressed	27
dna sequencing	27
elevating virus	27
described previously	26
community acquired	26
type strain	26
mouse parvovirus	26
may cause	26
bat rva	26
nt identity	26
helicobacter spp	26
icu patients	26
producing strains	26
electron microscopy	26
ndm strain	26
antibiotic consumption	26
influenza virus	26
complicated skin	26
cell proliferation	26
yeast extract	26
inclusion bodies	26
recent studies	26
specific primers	26
study group	26
high risk	26
nalidixic acid	26
tetracycline resistance	26
resistance patterns	26
positive isolates	26
protein expression	26
clinical features	26
predictive value	26
enzyme activity	26
enterococcus faecium	26
th day	26
encephalomyelitis virus	25
method according	25
bacterial growth	25
significant increase	25
resistance phenotype	25
decreased susceptibility	25
gut microbiota	25
resistance mechanisms	25
class i	25
heavy metals	25
treated patients	25
pfspz strains	25
neonatal mice	25
respiratory pathogens	25
lhlj vii	25
mrsa infections	25
ibv strain	25
gram positive	25
positive cocci	25
accession numbers	25
structural proteins	25
performed according	25
age groups	25
enteric viruses	25
rna viruses	25
spike protein	25
clinically relevant	25
medical microbiology	25
diabetes mellitus	25
virus isolation	25
room temperature	25
monoclonal antibodies	25
major cause	25
analysed using	24
ml min	24
flow cytometry	24
negative rods	24
rabbit haemorrhagic	24
antibody response	24
among patients	24
first time	24
molecular weight	24
genital tract	24
immunocompromised patients	24
streptococcus pyogenes	24
disc diffusion	24
natural infections	24
mesenteric lymph	24
ch ldl	24
pathogenic bacteria	24
clinical data	24
severe infections	24
statistical analysis	24
strain infection	24
high rate	24
pneumonia virus	24
multidrug resistant	24
five patients	24
sex ratio	24
significantly increased	24
bronchitis coronavirus	24
control measures	24
different species	24
mg dl	24
like virus	24
severe sepsis	24
infective endocarditis	24
laboratory animals	24
athymic mice	24
fatty acids	24
haemorrhagic disease	24
acute infection	24
days post	24
clinical cure	24
otitis media	24
pg ml	24
host cells	24
clinical response	23
spf chicken	23
care units	23
single dose	23
case report	23
avian coronavirus	23
acid sequence	23
mycoplasma pulmonis	23
low level	23
structure infections	23
binary toxin	23
may result	23
infl uenza	23
acute diarrhea	23
two cases	23
nitric oxide	23
mus musculus	23
lung volumes	23
inhibitory concentrations	23
pedv strain	23
mononuclear cells	23
staphylococcus epidermidis	23
reverse transcription	23
expression levels	23
antifungal therapy	23
deficient mice	23
prkdc scid	23
secondary metabolites	23
six patients	23
aspergillus niger	23
immunosorbent assay	23
highly conserved	23
analyzed using	23
positive results	23
general hospital	23
situ hybridization	23
healthy subjects	23
high degree	23
suckling mice	23
associated diarrhoea	23
resistance rate	23
strains tested	23
typhimurium strains	23
high levels	23
open reading	23
target protein	22
high resistance	22
negative control	22
hinton agar	22
imi cis	22
supplementary material	22
capsid protein	22
analysis using	22
group i	22
control study	22
foxn nu	22
different groups	22
amoxicillin clavulanate	22
helicobacter species	22
shiga toxin	22
acid substitutions	22
among children	22
four strains	22
retrospective study	22
strains may	22
acid bacteria	22
national institute	22
per year	22
chicken eggs	22
transplant recipients	22
three isolates	22
side effects	22
peripheral blood	22
patients infected	22
acute gastroenteritis	22
may lead	22
sequence data	22
also observed	22
rna polymerase	22
intestinal tract	22
serum concentrations	22
old spf	22
pcr method	22
genomic sequences	22
body weight	22
findings suggest	22
empiric therapy	22
bacterial isolates	22
preliminary results	21
candida albicans	21
naturally infected	21
skeletal muscle	21
mg iv	21
nude mice	21
copies ml	21
adult patients	21
esbl production	21
associated pneumonia	21
bloodstream infections	21
abdominal pain	21
salivary glands	21
host range	21
microbiology laboratories	21
infection may	21
clinical success	21
carbon sources	21
isolates collected	21
using pcr	21
erythromycin resistance	21
three times	21
accession jx	21
determine whether	21
logistic regression	21
normal mice	21
buffalo calves	21
middle east	21
organic acids	21
within days	21
vitro susceptibility	21
isolated strains	21
urine samples	21
different time	21
dna sequences	21
weight loss	21
human rhinovirus	21
even though	21
hbv dna	21
monoclonal antibody	21
resistance gene	21
developing countries	21
identified using	21
also may	21
enzyme immunoassay	20
data obtained	20
bacillus anthracis	20
research institute	20
severe acute	20
pneumoniae strains	20
esbl producing	20
pylori infection	20
molecular analysis	20
genetic relatedness	20
prospective study	20
tertiary care	20
mice develop	20
previously reported	20
norovirus infection	20
plasma concentrations	20
fusidic acid	20
applied biosystems	20
united kingdom	20
frequently used	20
linked immunosorbent	20
pv strains	20
clinical isolate	20
specific antibodies	20
patients hospitalised	20
difficile strains	20
persistently infected	20
ldl i	20
four different	20
protein binding	20
rna virus	20
group ii	20
staphylococcus spp	20
i i	20
underlying disease	20
relatively low	20
inbred mice	20
oral administration	20
young children	20
gc gc	20
resistant gram	20
accession cp	20
eltab operon	19
crude extracts	19
bacteria isolated	19
tested using	19
significantly different	19
highly susceptible	19
murine cytomegalovirus	19
specific pcr	19
obtained using	19
strains used	19
acute phase	19
difficile infection	19
es cells	19
mhv infection	19
pedv strains	19
plates containing	19
helicobacter hepaticus	19
gene sequences	19
selective pressure	19
medium composition	19
stranded rna	19
highly resistant	19
antibody production	19
month period	19
pcr using	19
clinical symptoms	19
rva strains	19
rotavirus infection	19
antifungal agents	19
cell growth	19
bronchodilator effect	19
polish ibv	19
among strains	19
serratia sp	19
clinical manifestations	19
recently described	19
different types	19
susceptibility tests	19
natural products	19
mic ratio	19
skin structure	19
environmental conditions	19
cure rates	19
experimental inoculation	19
well known	19
clinical efficacy	18
stationary phase	18
therapeutic option	18
amoxicillin clavulanic	18
pseudomonas sp	18
currently available	18
disease caused	18
host cell	18
lt expression	18
central laboratory	18
airway distensibility	18
distantly related	18
respiratory viruses	18
kg day	18
mouse models	18
patients without	18
glycopeptide resistance	18
previously published	18
using standard	18
transplantable tumors	18
clinical significance	18
acquired infections	18
six strains	18
several weeks	18
skin lesions	18
excellent activity	18
internal control	18
genomic analysis	18
calculated using	18
medical centres	18
critically ill	18
igg antibodies	18
western europe	18
bacterial species	18
enterobacter spp	18
using different	18
phase i	18
fungal infections	18
methods used	18
conventional methods	18
interpreted according	18
studies using	18
negative strains	18
gastric cancer	18
large scale	18
high frequency	18
mortality rates	18
significantly lower	18
hong kong	18
hcv rna	18
septic shock	18
highly contagious	18
nucleotide changes	18
product formation	18
lethal infection	18
gene cluster	18
susceptible strain	18
anaerobic conditions	18
commensal bacteria	18
nitrogen sources	18
enterotoxigenic escherichia	18
typing methods	18
tissue tropism	18
enzyme production	18
western blot	18
nosocomial pneumonia	18
resistant strain	18
ccov strains	18
antigen detection	18
recent study	17
astrovirus infection	17
infected colonies	17
pancreatic tissue	17
new class	17
strain isolated	17
mouse adenovirus	17
important factor	17
salmonella isolates	17
including methicillin	17
seven patients	17
vp region	17
sequencing data	17
experimental studies	17
infected cells	17
flaccid paralysis	17
ab biodisk	17
nucleotide identity	17
avian species	17
laboratory rodents	17
dairy products	17
asm undergoes	17
gold standard	17
strain infected	17
constructed using	17
lesser mealworm	17
northeast china	17
low prevalence	17
better understand	17
inflammatory response	17
two hundred	17
spf chickens	17
yc pedv	17
chronic infection	17
flow rate	17
mg day	17
may provide	17
third generation	17
two main	17
genetic analysis	17
plasmid dna	17
listeria monocytogenes	17
test results	17
randomly selected	17
like viruses	17
kill curves	17
genomic sequence	17
sheep blood	17
ddd tid	17
expression level	17
bifi dobacterium	17
wide variety	17
type ii	17
north american	17
common pathogens	17
per day	17
heterologous chmi	17
patient days	17
hiv infection	17
apache ii	17
positive cultures	17
faecium isolates	17
salmonella enterica	17
resistant enterococci	17
rapid detection	17
genetically modified	17
point mutations	17
serious infections	17
detection methods	17
fragment length	17
sequence identity	17
level resistance	17
czech republic	17
intestinal microbiota	17
showed high	17
median age	17
isolates showed	17
airway tree	17
vancomycin resistance	17
young mice	17
isolates recovered	17
fold higher	16
spectrum activity	16
infection rate	16
nosocomial infection	16
treatment failure	16
protein production	16
ascorbic acid	16
host species	16
genbank database	16
viral antigen	16
proteus mirabilis	16
laboratory using	16
retention time	16
different methods	16
human strains	16
prosthetic valve	16
accession jq	16
renal function	16
nt long	16
antibiotic concentrations	16
gene sequencing	16
current study	16
meningococcal disease	16
also used	16
hair coat	16
relatively high	16
frequently isolated	16
different regions	16
protease inhibitors	16
ethanol production	16
russian federation	16
lcmv infection	16
tg mice	16
nose inoculation	16
demyelinating disease	16
common cause	16
virus replication	16
bacteroides fragilis	16
intracerebral inoculation	16
vp gene	16
cov gc	16
neurological signs	16
outer membrane	16
resistance pattern	16
significant reduction	16
susceptible mice	16
respiratory syncytial	16
positive control	16
hinton broth	16
antifungal susceptibility	16
strain ck	16
may represent	16
highly divergent	16
human health	16
membrane protein	16
year old	16
mammalian species	16
parental strain	16
quinolone resistance	16
similar results	16
chicken flocks	16
early diagnosis	16
acute disease	16
valentine leukocidin	16
five isolates	16
negative predictive	16
also showed	16
microdilution panels	16
new zealand	16
treatment groups	16
five strains	16
lactam antibiotics	16
limited number	16
surveillance program	16
salivary gland	16
clinical laboratory	16
agglutination test	16
viral genome	16
fatty acid	16
results demonstrate	16
sequence typing	16
reading frames	16
rva bat	16
health surveillance	16
coagulase negative	16
trimethoprim sulfamethoxazole	16
comparative study	16
synergy test	16
vero cells	16
length polymorphism	16
double disk	16
subjects received	16
different genotypes	16
clinically significant	16
twice daily	16
done using	16
antimicrobial prophylaxis	16
times higher	16
high throughput	15
four patients	15
mouse populations	15
environmental factors	15
nu mice	15
class integrons	15
vaccinia virus	15
controlled trial	15
investigated using	15
vitro studies	15
first report	15
common among	15
three cases	15
syncytial virus	15
major role	15
dilution rate	15
health problem	15
causative organisms	15
serratia spp	15
bowel disease	15
resistance profile	15
lactobacillus casei	15
growth conditions	15
complete genomic	15
transgenic mice	15
cell epitopes	15
vitek system	15
elderly patients	15
authors declare	15
cost per	15
host immune	15
metabolic pathways	15
combination therapy	15
mass transfer	15
producing enterobacteriaceae	15
capsid region	15
experimental model	15
least two	15
penicillin resistant	15
nucleic acids	15
positive specimens	15
stem cell	15
clinical practice	15
neutralizing antibodies	15
mouse thymic	15
molecular evolutionary	15
serratia species	15
eight patients	15
respiratory infection	15
athymic nude	15
dna extraction	15
murid herpesvirus	15
biomedical research	15
pcr results	15
observed among	15
hospital acquired	15
minimal inhibitory	15
cell count	15
epidemic strains	15
strains resistant	15
uenza virus	15
protective effect	15
complete genomes	15
like particles	15
active infection	15
strain asm	15
breeding colonies	15
airway resistance	15
strains belonged	15
may contribute	15
life sciences	15
structural part	15
latin america	15
renal failure	15
informed consent	15
adaptive immune	15
mhv strains	15
oral dose	15
dendritic cells	15
accession number	15
different concentrations	15
susceptibility patterns	15
nine patients	15
tap water	15
strains exhibited	15
growth medium	15
type iv	15
igm antibodies	15
probiotic strain	15
pulsed field	15
viral metagenomics	15
positive pathogens	15
international committee	15
female mice	15
first step	15
dna sequence	15
mouse genome	15
viral hepatitis	15
binding sites	15
isolates tested	15
medium containing	15
mic range	15
positive patients	15
mvc strains	15
efflux pumps	15
two weeks	15
virus infections	14
lactamase production	14
viral gastroenteritis	14
isolates obtained	14
rnase iii	14
expressed genes	14
va hmo	14
success rates	14
respiratory distress	14
pathogenic strains	14
immunocompromised mice	14
rotavirus strains	14
cefoperazone sulbactam	14
also important	14
dna microarray	14
test program	14
interaction chromatography	14
pneumocystis carinii	14
diagnostic methods	14
pcr reaction	14
promoter region	14
invasive fungal	14
better understanding	14
mammalian cells	14
rrna genes	14
molecular basis	14
difficile toxin	14
clinical outcome	14
natural host	14
human serum	14
humoral immune	14
coronavirus infectious	14
akacid plus	14
differ significantly	14
culture positive	14
colony counts	14
study shows	14
previous study	14
strain vr	14
invasive aspergillosis	14
pcr product	14
lowest mic	14
crucial role	14
aspergillus fumigatus	14
inflammatory bowel	14
old man	14
gene therapy	14
average litter	14
bacterial cells	14
highly active	14
contact time	14
evolutionary genetics	14
conclusion reached	14
animal model	14
whole blood	14
cmv infection	14
murine typhus	14
present work	14
aeruginosa strains	14
strains identified	14
resistance mutations	14
microdilution methods	14
cellular immunity	14
epidemiological studies	14
will also	14
streptococcus agalactiae	14
acquired mrsa	14
primary care	14
innate immunity	14
culture medium	14
last decade	14
expanded broad	14
nucleocapsid protein	14
viral persistence	14
lactobacillus plantarum	14
results indicated	14
virus shedding	14
mean duration	14
breathing maneuvers	14
strains also	14
broad range	14
vast majority	14
metabolic flux	14
virus may	14
physical examination	14
valve endocarditis	14
pitot static	14
diffusion test	14
enterobacter cloacae	14
static probe	14
camp detrick	14
mycobacterium tuberculosis	14
salmonella typhimurium	14
surveillance study	14
poultry industry	14
time point	14
positive culture	14
alternative oxidase	14
antiretroviral therapy	14
fusion protein	14
rna replication	14
viral loads	14
hemorrhagic fever	14
tested positive	14
mixed infections	14
hydrogen peroxide	14
gram stain	14
may play	14
resistance mechanism	14
much higher	14
empiric treatment	14
severe disease	14
medical school	14
affinity chromatography	14
genetic basis	14
pulmonary disease	14
university medical	14
gene segments	14
resistant streptococcus	14
among different	14
newborn mice	14
severe cap	14
hydrophobic interaction	14
also identified	14
high rates	13
culture supernatants	13
multidrug resistance	13
lymph node	13
may explain	13
enzymatic hydrolysis	13
lamina propria	13
sccmec type	13
blot analysis	13
acute bacterial	13
probably due	13
vaccine development	13
clinical failure	13
also tested	13
small number	13
first case	13
ct scan	13
hospital mortality	13
negative pathogens	13
reference laboratory	13
metabolic activity	13
retrospective analysis	13
male mice	13
highly sensitive	13
two major	13
fragilis group	13
ft mic	13
media containing	13
enterica serovar	13
strain showed	13
underlying diseases	13
conducted using	13
antibiotic prescription	13
dba mice	13
interstitial pneumonia	13
producing isolates	13
immune complex	13
first described	13
ill patients	13
time rt	13
serum concentration	13
multivariate analysis	13
bronchitis viruses	13
medical university	13
ch lnm	13
healthy adult	13
affected mice	13
albicans strains	13
recombination event	13
alveolar macrophages	13
four isolates	13
also known	13
infected tissues	13
thymic virus	13
ibv lineages	13
recombinant strains	13
aureus atcc	13
single oral	13
steady state	13
phosphate buffer	13
susceptibility test	13
currently used	13
experimental infections	13
chickens infected	13
antibiotic resistant	13
negative results	13
increased risk	13
human infections	13
start codon	13
atrophic gastritis	13
human norovirus	13
strain respprrs	13
cellular immune	13
eradication rates	13
brain tissue	13
takes place	13
carbapenem resistance	13
rt pcr	13
resistant acinetobacter	13
sentinel mice	13
ng ml	13
live attenuated	13
experimental data	13
differences among	13
severe combined	13
regression model	13
natural conditions	13
plant growth	13
quorum sensing	13
overall mortality	13
strains collected	13
antimicrobial agent	13
significantly associated	13
strains detected	13
efflux pump	13
horizontal transfer	13
days later	13
susceptibility rates	13
clinically important	13
medical records	13
murine encephalomyelitis	13
antimicrobial treatment	13
comparative analysis	13
standard methods	13
ms ms	13
dissolved oxygen	13
pfge patterns	13
metal ions	13
retinal degeneration	13
also detected	13
molecular mechanisms	13
took place	13
diabetic foot	13
cell surface	13
one week	13
correctly identified	13
new species	13
reactive protein	13
may persist	13
southeast asia	13
results also	13
mlsb phenotype	13
data analysis	13
see table	13
dry weight	13
resistant genes	13
ruffled fur	13
patients suffering	13
clustered together	13
confidence intervals	13
cohort study	13
tertiary hospital	13
total protein	13
neurological symptoms	13
adverse event	13
measured using	13
children aged	13
studies showed	13
aeruginosa isolates	13
intranuclear inclusions	13
neurological disease	13
neutropenic patients	13
also resistant	13
human disease	12
sequence similarity	12
acoustic reflection	12
data indicate	12
bacillus cereus	12
heart disease	12
horizontal transmission	12
penicillin resistance	12
hp infection	12
lactamase genes	12
growth hormone	12
children attending	12
human infection	12
specific activity	12
several days	12
using two	12
resistant pneumococci	12
burn wounds	12
species isolated	12
received mg	12
baumannii strains	12
antibiotic policy	12
rapid diagnosis	12
mrna levels	12
negative anaerobic	12
primers used	12
expression vector	12
liquid chromatography	12
food borne	12
inbred mouse	12
infectious complications	12
infectious virus	12
genetically engineered	12
general population	12
hunched posture	12
acid residues	12
type iii	12
future studies	12
spinal cords	12
included patients	12
sequence alignment	12
medical center	12
treatment duration	12
long term	12
pfspz vaccine	12
statistical significance	12
increased significantly	12
chemical synthesis	12
nk cell	12
control subjects	12
first isolated	12
kg ha	12
maternal immunity	12
vancomycin aztreonam	12
viral particles	12
incubation period	12
weaned pups	12
tissue concentration	12
enterotropic mhv	12
widely distributed	12
strains regardless	12
bacterial counts	12
lymphoid tissues	12
wt cmr	12
different genetic	12
natural killer	12
human astrovirus	12
may suggest	12
will help	12
molecular characterisation	12
canary islands	12
human astroviruses	12
strains ck	12
increasing number	12
bacteroides spp	12
clinical outcomes	12
like gene	12
syndrome virus	12
peptide deformylase	12
old female	12
economic losses	12
isolates belonged	12
fluoroquinolone resistance	12
common ancestor	12
toxic shock	12
cytomegalovirus infection	12
slightly higher	12
antibacterial agents	12
agents tested	12
canine astv	12
potent expanded	12
like receptors	12
endothelial cells	12
phage types	12
renal insufficiency	12
mn pv	12
laboratory rat	12
large numbers	12
good correlation	12
enteric disease	12
cranberry juice	12
years ago	12
diagnostic tests	12
ph values	12
heart failure	12
human pathogen	12
cystic oviducts	12
diabetic patients	12
cultures using	12
older mice	12
signs include	12
genetic changes	12
recombinant strain	12
bacterial cell	12
presented data	12
opportunistic infections	12
one day	12
second group	12
gene transfer	12
study included	12
patients undergoing	12
studied period	12
macrolide resistant	12
experimental conditions	12
bovine serum	12
data collection	12
horse blood	12
human isolates	12
rdrp region	12
clinical diagnosis	12
estimate asm	12
batch cultures	12
host genotype	12
daily doses	12
vancomycin resistant	12
reverse genetic	12
porcine reproductive	12
rapid identification	12
bacterial load	12
normal flora	12
scientific research	12
cell density	12
many different	12
white blood	12
species transmission	12
acute care	12
pcr primers	12
low levels	12
single nucleotide	12
serological testing	12
direct detection	12
related infections	12
genetic characterization	12
culture conditions	12
food industry	12
mg tid	12
embryonated eggs	12
meca gene	12
used extensively	12
mechanical properties	12
agarose gel	12
blood group	12
cancer patients	12
tigecycline may	12
embryonic stem	12
monte carlo	12
bp fragment	12
mixed cultures	12
neisseria meningitidis	12
samples collected	12
human malaria	12
young adults	12
cc isolates	12
data set	12
disk synergy	12
infection occurs	12
clinical laboratories	12
signal peptide	12
general practitioners	12
aerobic gram	12
wide spectrum	12
tigecycline compared	12
mice also	12
method using	12
mammary tumors	12
pcr testing	12
metabolic fluxes	12
significantly reduced	12
relationships among	12
savannah river	12
obstructive pulmonary	12
dyspeptic patients	12
resistant staphylococci	12
biochemical tests	12
acid changes	12
genetic elements	12
highly variable	12
found among	11
dilution methods	11
agr group	11
nested pcr	11
higher levels	11
edim virus	11
viral proteins	11
linear regression	11
etiological agent	11
immune cells	11
laboratory tests	11
among others	11
untranslated region	11
lesions include	11
novel genotype	11
presentation will	11
national reference	11
population analysis	11
expanded bed	11
human rotavirus	11
medical faculty	11
see chapter	11
neonatal intensive	11
thermo fisher	11
protective immunity	11
intestinal contents	11
bacterial resistance	11
susceptibility pattern	11
diagnosis diagnosis	11
vitro model	11
encoding genes	11
several genes	11
first line	11
lactobacillus rhamnosus	11
mini kit	11
two days	11
assessed using	11
evaluated using	11
restriction fragment	11
transcription factor	11
deformylase inhibitor	11
prevotella spp	11
contractile capacity	11
samples obtained	11
breeding colony	11
antimicrobial susceptibilities	11
spectrum antibiotics	11
metal resistance	11
opportunistic pathogens	11
nucleotide polymorphisms	11
srs soils	11
cell extracts	11
extraction method	11
histological lesions	11
significant role	11
sample collection	11
forming units	11
esbl producers	11
transmural pressure	11
patients aged	11
dosing interval	11
may contain	11
leading cause	11
capillary electrophoresis	11
dirty bedding	11
aspergillus spp	11
less susceptible	11
early polish	11
primary infection	11
strain co	11
previous reports	11
skin infections	11
type esbls	11
nvp pdf	11
important cause	11
lt produced	11
novel murine	11
among gram	11
duodenal ulcer	11
also present	11
seven strains	11
cell development	11
newly identified	11
also occur	11
local laboratory	11
infection also	11
high incidence	11
structural genes	11
susceptibility profile	11
endemic regions	11
attenuated viruses	11
eliminate infection	11
two times	11
different serotypes	11
physiological state	11
igg anti	11
pulmonary lesions	11
genetics analysis	11
complete sequence	11
effective means	11
control strain	11
long periods	11
high activity	11
tissue sections	11
new drugs	11
vivo experiments	11
infected chickens	11
molecular detection	11
dependent rna	11
data show	11
will provide	11
reovirus infection	11
bat rvas	11
mechanical ventilation	11
nccls broth	11
cutaneous leishmaniasis	11
pilot study	11
norovirus gii	11
bacterial strain	11
immunomodulatory effect	11
spectrum cephalosporins	11
stool specimens	11
wound infections	11
diagnostic accuracy	11
novel astrovirus	11
abdominal infections	11
virulence factor	11
mice experimentally	11
clinical course	11
less likely	11
chronic obstructive	11
time consuming	11
conjugate vaccine	11
nccls recommendations	11
genbank accession	11
energy source	11
different countries	11
different conditions	11
astv strains	11
south america	11
antibiotic prescribing	11
preliminary data	11
sequence comparison	11
lt production	11
different lung	11
significant effect	11
based method	11
yz strains	11
whole organism	11
positive organisms	11
cell tropism	11
selected strains	11
colon cancer	11
extracted using	11
tissue infection	11
reliable therapeutic	11
also included	11
contemporary mouse	11
colonic hyperplasia	11
ad libitum	11
rdrp regions	11
determined according	11
nasal carriage	11
bordetella pertussis	11
care hospitals	11
strains expressing	11
school children	11
tested strains	11
fisher scientific	11
nk cells	11
metabolic network	11
antimicrobial surveillance	11
regression analysis	11
inflammatory lesions	11
positive result	11
every hours	11
biopsy samples	11
bronchoalveolar lavage	11
high dose	11
based methods	11
iu ml	11
common pathogen	11
participating site	11
commonly isolated	11
comparator agents	11
phylogenetic analyses	11
cells grown	11
economic impact	11
transmission events	11
allowed us	11
wheat bran	11
usually subclinical	11
clostridium perfringens	11
parental virus	11
mock infected	11
among clinical	11
common bacterial	11
clinical presentation	11
factors associated	11
allantoic fluid	11
toxin genes	11
white matter	11
producing escherichia	11
nosocomial pathogen	11
isolated strain	11
program determined	11
pcr detection	11
aortic valve	11
ml hg	11
genetically distinct	11
species including	11
many cases	10
histological examination	10
astrovirus strains	10
high quality	10
blister fluid	10
laboratory personnel	10
patient population	10
methicillin resistance	10
parental sex	10
different antibiotics	10
lung inflation	10
eight strains	10
pneumoniae atcc	10
viruses isolated	10
agar medium	10
industrial scale	10
central venous	10
intestinal mucosa	10
patients hospitalized	10
key role	10
free drug	10
culture media	10
invasive disease	10
acute stage	10
emm types	10
studies will	10
hcv infection	10
pneumococcal disease	10
serum levels	10
four times	10
thermal stability	10
lung parenchyma	10
viridans streptococci	10
intestinal microflora	10
river site	10
lesions may	10
two methods	10
past years	10
well established	10
previously identified	10
mlsb resistance	10
transfer rate	10
blood stream	10
wild rats	10
respiratory specimens	10
fragilis strains	10
blood cells	10
microscopic examination	10
ii score	10
pharmacokinetic parameters	10
tandem repeat	10
ampicillin sulbactam	10
spectrum antimicrobial	10
microbiology laboratory	10
lactobacillus reuteri	10
like receptor	10
partial least	10
emergency department	10
moraxella catarrhalis	10
four cases	10
type ibv	10
copy number	10
contaminated food	10
salt concentration	10
univariate analysis	10
ciliated epithelium	10
often used	10
case reports	10
spent grain	10
salmonella enteritidis	10
ii strains	10
blood mononuclear	10
molecular mass	10
virus isolated	10
factors affecting	10
several different	10
east technical	10
significant correlation	10
human cases	10
lesser extent	10
pichia pastoris	10
deduced amino	10
study conducted	10
long axis	10
treponema pallidum	10
chronic hcv	10
oral route	10
children years	10
enterobacteriaceae strains	10
overall incidence	10
drug concentrations	10
metropolitan area	10
related strains	10
screening test	10
high number	10
cell debris	10
months later	10
first detected	10
sample size	10
microarray analysis	10
acquired resistance	10
mean serum	10
bacillus atrophaeus	10
vaccinated chickens	10
crude extract	10
specific genes	10
continuous culture	10
also confirmed	10
functional analysis	10
avian astroviruses	10
six different	10
hearing loss	10
rat colonies	10
gut virome	10
type diabetes	10
strains circulating	10
national research	10
model using	10
using nccls	10
mice treated	10
statistical methods	10
laboratory findings	10
human rva	10
positive predictive	10
generation cephalosporin	10
raw material	10
mean value	10
mrsa prevalence	10
working volume	10
histopathological changes	10
canine astrovirus	10
islamic republic	10
infections may	10
oral microbiology	10
control strains	10
serial passage	10
tinea pedis	10
soil habitat	10
invasive candidiasis	10
protein synthesis	10
field isolates	10
lactis bb	10
genotype i	10
endemic region	10
data showed	10
specific igg	10
levofloxacin mic	10
hospital admission	10
patients diagnosed	10
pneumococcal pneumonia	10
reaction mixture	10
tissue engineering	10
positive effect	10
biological properties	10
major problem	10
commonly encountered	10
generated using	10
resistance levels	10
health status	10
respiratory samples	10
field strains	10
transmissible gastroenteritis	10
degrading enzymes	10
leukemia virus	10
reflection technique	10
gel filtration	10
respiratory system	10
patients included	10
nine strains	10
evolutionary rate	10
renal impairment	10
arthrobacter sp	10
randomized controlled	10
homologous recombination	10
ethics committee	10
also revealed	10
sequence variation	10
animal experiments	10
phage typing	10
icu admission	10
phylogenetic groups	10
hand hygiene	10
detailed analysis	10
body fluids	10
vertical transmission	10
infection due	10
samples taken	10
protease inhibitor	10
dna polymerase	10
north liberty	10
alphitobius diaperinus	10
transplantable tumours	10
fluorescent protein	10
detected using	10
south korea	10
active agents	10
signal transduction	10
severe infection	10
powerful tool	10
growth phase	10
antibacterial effect	10
isolates resistant	10
effective treatment	10
rva human	10
carrier mice	10
many tissues	10
pertussis infection	10
mic determination	10
efflux systems	10
tissue concentrations	10
pathogens including	10
hemagglutinating encephalomyelitis	10
response genes	10
first two	10
eastern europe	10
infection caused	10
genetic backgrounds	10
tw i	10
candida infections	10
slime production	10
enteric pathogens	10
stenotrophomonas maltophilia	10
may reflect	10
ug ml	10
pylori isolates	10
day old	10
chronic hepatitis	10
two phase	10
transmission occurs	10
genetic variation	10
biotechnology institute	10
one year	10
binding capacity	10
polish strains	10
automated system	10
test method	10
agar diffusion	10
strains using	10
weeks later	10
software package	10
acinetobacter baumanii	10
bayesdiallel model	10
sole carbon	10
pharmaceutical industry	10
parental strains	10
coli isolated	10
proinfl ammatory	10
phylogenetic relationships	10
vaccine efficacy	10
glucuronic acid	10
gene revealed	10
genetic heterogeneity	10
clinical use	10
multilocus sequence	10
different media	10
disease severity	10
microbiological analysis	10
liver disease	10
sectional area	10
respiratory symptoms	10
significant association	10
close contact	9
murine coronavirus	9
analysis based	9
pasteurella pneumotropica	9
blood cell	9
commonly associated	9
isolated species	9
two types	9
strains carrying	9
site year	9
insect cell	9
day post	9
lumbar spine	9
stranded dna	9
outpatient antibiotic	9
organic compounds	9
southern china	9
may influence	9
strains will	9
saudi arabia	9
increasing prevalence	9
bacterial dna	9
two distinct	9
shock syndrome	9
immunomodulatory activities	9
enterotropic strains	9
veterinary medicine	9
enteric virus	9
free mice	9
enterococcus sp	9
computed tomography	9
chlamydia trachomatis	9
cause severe	9
using specific	9
supplementary data	9
four major	9
heterologous strains	9
adaptive immunity	9
gastrointestinal infections	9
strain may	9
polish gi	9
eight isolates	9
defined daily	9
consumption rate	9
chmi strains	9
nt aa	9
research centre	9
appropriate use	9
survival rate	9
major source	9
drug classes	9
nucleotide similarity	9
respiratory signs	9
asm bundle	9
intermediate resistance	9
rhamnosus gg	9
immunized group	9
attenuated vaccine	9
urine isolates	9
time period	9
environmental samples	9
pcr analysis	9
benefi cial	9
motor neurons	9
viral pathogens	9
faropenem medoxomil	9
university hospitals	9
invasive infections	9
aureus infections	9
four ibv	9
burn wound	9
conserved among	9
three years	9
lactamase inhibitor	9
lymphoid tissue	9
increasing concentrations	9
mice genetic	9
bacillus sp	9
binding protein	9
rapid development	9
primer pairs	9
results will	9
die within	9
way anova	9
severe cases	9
husbandry practices	9
medical schools	9
new antimicrobial	9
grade i	9
appropriate antibiotic	9
significant decrease	9
prescribed antimicrobials	9
resistance determinant	9
early stages	9
high affinity	9
recently developed	9
often associated	9
typing phage	9
elisa test	9
ciprofloxacin susceptibility	9
melting temperature	9
mouse cytomegalovirus	9
chromosomal dna	9
structural protein	9
viruses may	9
murine hepatitis	9
pfspz strain	9
bacterial prostatitis	9
rd generation	9
pcr ribotype	9
master mix	9
epithelial cell	9
active site	9
blood pressure	9
lung tissue	9
found positive	9
viridans group	9
blood donors	9
resistance development	9
showed significant	9
coronavirus strains	9
resistant gbs	9
within one	9
polyoma virus	9
acquired respiratory	9
mouse serum	9
effi cacy	9
high cell	9
odds ratio	9
underlying conditions	9
environmental serratia	9
one hand	9
isolates carried	9
received grn	9
intestinal epithelium	9
cell tumors	9
puerto rico	9
dairy sheep	9
care centres	9
cpe gene	9
streptococcal colonisation	9
remains unclear	9
transgenic plants	9
affected animals	9
eukaryotic viral	9
relatively resistant	9
yz strain	9
tract pathogens	9
cells ml	9
nasopharyngeal aspirates	9
time periods	9
acute pyelonephritis	9
test using	9
coding sequences	9
environmental contamination	9
showed resistance	9
mic value	9
hcv core	9
eight cases	9
different parts	9
per group	9
much lower	9
canine parvovirus	9
years period	9
different patterns	9
genome analysis	9
pfge profiles	9
identified among	9
enzootically infected	9
ulcerative dermatitis	9
strains vr	9
resistant mutants	9
zone sizes	9
laboratory standards	9
developed countries	9
used antibiotics	9
widespread use	9
blood concentrations	9
primer pair	9
antifungal activity	9
biologically active	9
high mic	9
serum specimens	9
one side	9
optical density	9
maximum likelihood	9
asian strains	9
daily dose	9
quaternary ammonium	9
burgdorferi sensu	9
microbial biotechnology	9
related viruses	9
haemorrhagic fever	9
rva strain	9
sanger sequencing	9
proviral dna	9
house mice	9
fruit bats	9
coli strain	9
guinea pigs	9
high yield	9
fatal disease	9
causative pathogen	9
cell populations	9
brucella melitensis	9
patients showed	9
coli atcc	9
differential expression	9
chronic bronchitis	9
serological monitoring	9
two separate	9
may increase	9
process development	9
difficile isolates	9
group consisted	9
simultaneous detection	9
green fluorescent	9
multiple mechanisms	9
es cell	9
using reverse	9
adenovirus infection	9
toxoplasma gondii	9
children less	9
interspecies transmissions	9
antigenically distinct	9
proteolytic activity	9
antimicrobial consumption	9
diversity among	9
gastric biopsies	9
gastroenteritis virus	9
medical staff	9
definitive diagnosis	9
enteral feeding	9
streptococcal infections	9
different ibv	9
map test	9
pathogenic potential	9
wastewater treatment	9
time kill	9
mean time	9
genes using	9
mn phenotype	9
penicillin susceptibility	9
iia strains	9
murine leukemia	9
homologous chmi	9
different clinical	9
data sets	9
except one	9
positive pcr	9
core antigen	9
several strains	9
field conditions	9
attenuated strains	9
acute diarrhoea	9
two years	9
animal welfare	9
vitro antimicrobial	9
acute flaccid	9
care hospital	9
large amounts	9
compartment model	9
acid identity	9
genomic islands	9
novel method	9
cardiac surgery	9
zoonotic potential	9
wall strain	9
mice showed	9
new technologies	9
mixed infection	9
rodent parvoviruses	9
cause gastroenteritis	9
lactamase inhibitors	9
bact alert	9
mg po	9
commonly prescribed	9
cell mass	9
food poisoning	9
packed bed	9
fine chemicals	9
ndm infected	9
attenuated vaccines	9
previous months	9
china complete	9
give rise	9
experimental design	9
systems biology	9
small airways	9
strain types	9
great potential	9
medical department	9
paediatric patients	9
empirical treatment	9
serovar typhimurium	9
acute exacerbation	9
three independent	9
operating conditions	9
hiv disease	9
tannic acid	9
findings indicate	9
strain ba	9
level gentamicin	9
potent activity	9
virus recovery	9
online version	9
otherwise healthy	9
psoas abscess	9
nsp gene	9
associated diarrhea	9
marine sponges	9
adverse effects	9
strain nrtw	9
amplified using	9
cryptosporidium spp	9
clinical findings	9
study drug	9
new method	9
positive species	9
mrsa infection	9
papn rbd	9
animalis ssp	9
high concentrations	9
serial dilutions	9
bactericidal effect	9
results revealed	9
reference genome	9
animal origin	9
restriction analysis	9
biological samples	9
cell activity	9
clindamycin resistance	9
specific cd	9
highest identity	9
mouse colony	9
suckling piglets	9
fp monooxygenase	9
well documented	9
tested etec	9
new genotype	9
plant species	9
structural variants	9
may affect	9
old male	9
healthy children	9
founder strains	9
clinical setting	9
like strains	9
lt types	9
three heterologous	9
hospital infection	9
ribyz strain	9
malaria vaccine	9
using broth	9
also affect	9
eradication therapy	9
cell types	9
older adults	9
detection kit	9
sea lion	9
two species	9
heilongjiang province	9
neutralizing antibody	9
inhibitory effect	9
tetracycline resistant	9
within weeks	9
aged mice	9
patients died	9
casei dn	9
fq resistance	9
group received	9
magnetic resonance	9
synovial fluids	8
great interest	8
higher mortality	8
cloacal swabs	8
cre recombinase	8
long time	8
bootstrap values	8
sequence types	8
common source	8
enterococcal isolates	8
infected rats	8
electron donor	8
esbl genes	8
type fimbriae	8
vitro assays	8
log reduction	8
airway narrowing	8
plasma cells	8
protein sequence	8
viral respiratory	8
associated infections	8
experimentally induced	8
reassortment events	8
rapid method	8
gastric mucosa	8
medical research	8
bacterial pathogen	8
collected throughout	8
world regions	8
higher proportion	8
sphingobium sp	8
lb broth	8
mdr strains	8
industrial biotechnology	8
pfge types	8
mutation frequency	8
dead space	8
breast milk	8
per bird	8
pivotal role	8
recombinant human	8
well plates	8
six isolates	8
pathogens responsible	8
strains form	8
hbga binding	8
younger adults	8
blood sample	8
body plethysmography	8
chickens challenged	8
successfully treated	8
culture methods	8
epitope sequences	8
gas chromatography	8
intravenous inoculation	8
ambulatory care	8
duck astrovirus	8
bottom cages	8
novel human	8
antiviral therapy	8
heterologous proteins	8
muscle tone	8
receptor binding	8
clinical status	8
vero cell	8
transmissible murine	8
rrna sequencing	8
average age	8
groups according	8
organic solvents	8
environmental isolates	8
antibiotics used	8
research council	8
natural transmission	8
parvovirus infection	8
polymorphic sites	8
production processes	8
sars coronavirus	8
necrotizing pancreatitis	8
brain barrier	8
virulence gene	8
labile toxin	8
giardia muris	8
least days	8
patients presented	8
genetic background	8
inhibitory peptides	8
data support	8