key: cord-1028566-e01ioy2a authors: Cheng, M. M. C.; Lai, G. K. K.; Griffin, S. D. J.; Leung, F. C. C. title: Complete Genome Sequence of Klebsiella quasipneumoniae MMCC7, Isolated from an Eclectus Parrot (Eclectus roratus) date: 2022-04-25 journal: Microbiology resource announcements DOI: 10.1128/mra.00171-22 sha: b0070dbea61e74d0b81fd1c9e1ad0dff743ff0d5 doc_id: 1028566 cord_uid: e01ioy2a Klebsiella quasipneumoniae MMCC7 is a multidrug- and heavy metal-resistant strain isolated from the feces of a pet shop eclectus parrot in Hong Kong. The complete genome, a single chromosome and circular plasmid (5,382,488 bp; G+C content, 57.79%), was determined by hybrid assembly. KpVR Web-based tool (https://bioinfo-mml.sjtu.edu.cn/KpVR/index.php) (28) , contains heavy-metal resistance genes, including the merRPTCA and copABCDRS operons (29, 30) , and the mrkABCDFJ operon coding type 3 fimbriae (31). It also encodes the AMR genes blaTEM-1 (32), aph(30)-Ib, aph(6)-Id (33), tetD, macAB, and sul2. Data availability. The complete genome sequences and raw sequence data for K. quasipneumoniae MMCC7 are available through NCBI under BioProject number PRJNA759343, with GenBank accession numbers CP082785 (chromosome) and CP082786 (plasmid) and SRA numbers SRR15928120 (MinION) and SRR15928121 (MiSeq). Klebsiella spp. as nosocomial pathogens: epidemiology, taxonomy, typing methods, and pathogenicity factors Complete genome sequence of endophytic nitrogen-fixing Klebsiella variicola strain DX120E Commonality of multidrug-resistant Klebsiella pneumoniae ST348 isolates in horses and humans in Portugal Klebsiella pneumoniae: a major worldwide source and shuttle for antibiotic resistance Rising rates of hospital-onset Klebsiella spp. and Pseudomonas aeruginosa bacteraemia in NHS acute trusts in England: a review of national surveillance data Klebsiella pneumoniae infections in COVID-19 patients: a 2-month retrospective analysis in an Italian hospital Pooled plasmid sequencing reveals the relationship between mobile genetic elements and antimicrobial resistance genes in clinically isolated Klebsiella pneumoniae Carriage of blaKPC-2 by a virulence plasmid in hypervirulent Klebsiella pneumoniae Genomic characterization of Klebsiella quasipneumoniae from clinical specimens in Singapore Population genomics of Klebsiella pneumoniae One Health genomic study of human and animal Klebsiella pneumoniae isolated at diagnostic laboratories on a small Caribbean island Emergence of bla NDM -carrying IncX3 plasmid in Klebsiella pneumoniae and Klebsiella quasipneumoniae from duck farms in Guangdong Province Draft genome sequence of CTX-M-type b-lactamase-producing Klebsiella quasipneumoniae subsp. similipneumoniae isolated from a box turtle Description of Klebsiella quasipneumoniae sp. nov., isolated from human infections, with two subspecies, Klebsiella quasipneumoniae subsp. quasipneumoniae subsp. nov. and Klebsiella quasipneumoniae subsp. similipneumoniae subsp. nov., and demonstration that Klebsiella singaporensis is a junior heterotypic synonym of Klebsiella variicola Plasmid carrying mcr-9 from an extensively drug-resistant NDM-1-producing Klebsiella quasipneumoniae subsp. quasipneumoniae clinical isolate Forensic genomics of a novel Klebsiella quasipneumoniae type from a neonatal intensive care unit in China reveals patterns of colonization Klebsiella pneumoniae: prevalence, reservoirs, antimicrobial resistance, pathogenicity, and infection: a hitherto unrecognized zoonotic bacterium Genome-based analysis of Klebsiella spp. isolates from animals and food products in Germany Klebsiella pneumoniae as a key trafficker of drug resistance genes from environmental to clinically important bacteria Luria broth (LB) and Luria agar (LA) media and their uses Trimmomatic: a flexible trimmer for Illumina sequence data Deepbinner: demultiplexing barcoded Oxford Nanopore reads with deep convolutional neural networks Unicycler: resolving bacterial genome assemblies from short and long sequencing reads RefSeq: an update on prokaryotic genome annotation and curation DNA-DNA hybridization values and their relationship to whole-genome sequence similarities Variants of the Klebsiella pneumoniae OKP chromosomal beta-lactamase are divided into two main groups, OKP-A and OKP-B Genetic diversity and evolution of the virulence plasmids encoding aerobactin and salmochelin in Klebsiella pneumoniae Transcriptional landscape of a bla KPC-2 plasmid and response to imipenem exposure in Escherichia coli TOP10 Heavy metal resistance in bacteria from animals MrkF is a component of type 3 fimbriae in Klebsiella pneumoniae Natural evolution of TEM-1 b-lactamase: experimental reconstruction and clinical relevance High-level aminoglycoside resistance in human clinical Klebsiella pneumoniae complex isolates and characteristics of armAcarrying IncHI5 plasmids