key: cord-1004177-i3707gqf authors: Casales, Erkuden; Martisova, Eva; Villanueva, Helena; de Cerio, Ascensión López Díaz; Inoges, Susana; Silva-Pilipich, Noelia; Ballesteros-Briones, María Cristina; Aranda, Alejandro; Bezunartea, Jaione; Bendandi, Maurizio; Pastor, Fernando; Smerdou, Cristian title: Idiotype vaccines produced with a non-cytopathic alphavirus self-amplifying RNA vector induce antitumor responses in a murine model of B-cell lymphoma date: 2021-11-02 journal: Sci Rep DOI: 10.1038/s41598-021-00787-5 sha: 739c3d830c6a428a2fd0fef5cd7ef3a593c0f5c4 doc_id: 1004177 cord_uid: i3707gqf A promising therapy for patients with B-cell lymphoma is based on vaccination with idiotype monoclonal antibodies (mAbs). Since idiotypes are different in each tumor, a personalized vaccine has to be produced for each patient. Expression of immunoglobulins with appropriate post-translational modifications for human use often requires the use of stable mammalian cells that can be scaled-up to reach the desired level of production. We have used a noncytopathic self-amplifying RNA vector derived from Semliki Forest virus (ncSFV) to generate BHK cell lines expressing murine follicular lymphoma-derived idiotype A20 mAb. ncSFV/BHK cell lines expressed approximately 2 mg/L/24 h of A20 mAb with proper quaternary structure and a glycosylation pattern similar to that of A20 mAb produced by hybridoma cells. A20 mAb purified from the supernatant of a ncSFV cell line, or from the hybridoma, was conjugated to keyhole limpet hemocyanin and used to immunize Balb/c mice by administration of four weekly doses of 25 µg of mAb. Both idiotype mAbs were able to induce a similar antitumor protection and longer survival compared to non-immunized mice. These results indicate that the ncSFV RNA vector could represent a quick and efficient system to produce patient-specific idiotypes with potential application as lymphoma vaccines. www.nature.com/scientificreports/ More recently, recombinant technology has allowed to shorten vaccine production times. In this approach, the sequences of both heavy and light chain variable regions of the Id are cloned into an expression vector for the production of Id protein in different systems, such as mammalian cells, insect cells, tobacco plants, and bacteria 1 . As the Id is a self-antigen, its low immunogenicity must be taken into account when designing vaccination protocols to achieve an effective immune response. To enhance its immunostimulatory properties, the Id is usually conjugated to an immunogenic carrier, typically keyhole limpet hemocyanin (KLH), and administered alongside an adjuvant such as granulocyte-macrophage colony-stimulator factor (GM-CSF). Several proof-of-principle studies carried out in a limited number of patients have been successful at providing evidence of biological and clinical efficacy of this type of immunotherapy 8 . Nevertheless, large-scale randomized clinical trials have failed so far to show a significant difference between control treatment and Id vaccination, although important flaws in the study designs may have compromised their results 2,9 . Mammalian cells are usually employed for Id expression as they provide the appropriate post-translational modifications. Self-replicating RNA vectors, such as those derived from alphaviruses, have shown a high efficacy for protein expression in mammalian cells. These vectors include Sindbis virus (SIN), Semliki Forest Virus (SFV) and Venezuelan equine encephalitis virus (VEEV) and are usually based on RNA replicons in which the viral structural genes have been substituted by a heterologous gene. They provide high and rapid protein expression, although in a transient way, due to the cytopathic effect of viral RNA replication in most mammalian cells 10 . To overcome this drawback, several mutations have been described that make these vectors less cytopathic, allowing prolonged protein expression in vitro 11, 12 . Previously, we have reported a noncytopathic mutant derived from SFV (ncSFV) that contains mutations P718T and R649H in the nsp2 subunit of the replicase. This ncSFV generates high expression levels of heterologous proteins in vitro, similar to wild type SFV 13 . By including a puromycin resistance cassette (pac) in ncSFV, stable cell lines expressing high levels of heterologous proteins can be easily obtained through selection with this antibiotic 14 . In this work, BHK stable cell lines expressing the Id from murine A20 B cell lymphoma were generated using the ncSFV RNA vector. A20 Id was purified from the supernatant of a high expressing ncSFV cell line and used to immunize mice. When challenged with A20 cells, immunized mice showed a significant reduction of tumor size and increase in survival, compared to the control group. Cells. BHK-21 cells (ATCC: CCL-10) and derived stable cell lines were cultured in BHK-21 Glasgow MEM (Gibco BRL, UK) supplemented with 5% FCS, 10% tryptose phosphate broth, 2 mM glutamine, 20 mM HEPES, 100 µg/ml streptomycin and 100 IU/ml penicillin (BHK complete medium). A20 lymphoma cells (ATCC ® TIB-208) were cultured in RPMI medium supplemented with 10% FCS, glutamine and streptomycin/penicillin as previously described for BHK cells. Hybridoma cells were obtained by fusion of A20 cells with P3X63Ag8.653 (ATCC ® CRL-1580™) as described 15 . Plasmid constructs. Plasmid ncSFV-pac2A, which contains the P718T and R649H mutations in the nsp2 subunit of the SFV replicase and the pac gene downstream of the subgenomic promoter (sgPr) followed by the sequence coding for the foot and mouth disease virus 2A autoprotease (2A), was previously described by our group 13, 14 and used to generate ncSFV-pac plasmids expressing A20 mAb. For this purpose we first purifed total RNA from A20 lymphoma cells and synthesized cDNA using random primers. Since the sequence of the A20 mAb was already known 7 , we designed specific oligonucleotides to amplify the HC and LC sequences (Supplementary Table 1 ) from the obtained cDNA. We generated DNA fragments containing both the HC and LC chains of the antibody by PCR and subcloned them into the Xma I site of the ncSFV-pac2A plasmid (Fig. 1) . PCR fragments were obtained as follows: (i) For ncSFV-pacA20sgPr, a crossover PCR was designed to insert an sgPr sequence between both chains. The first PCR was performed with oligonucleotides 1 + 2 (Supplementary Table 1 ) and the second PCR with oligonucleotides 3 + 4. Fragments obtained from both PCRs were purified, mixed in equal amounts and used as template for a crossover PCR using oligonucleotides 1 + 4, obtaining a 2191 bp fragment with the LC followed by sgPr and HC. This fragment was subcloned into pGEM-T, sequenced, digested with Xma I and subcloned into ncSFV-pac, using the same restriction site. (ii) For ncSFV-pac-A20HLC a similar strategy was followed using primers 5 + 6 and 7 + 8 to generate two independent fragments and primers 5 + 8 for the crossover PCR, generating a 2196 bp fragment with the HC followed by sgPr and LC. (iii) For ncSFV-pac-A20-2A a similar strategy was used using primers 5 + 9 and 10 + 8 to generate two independent fragments and primers 5 + 8 for the crossover PCR, generating a 2193 bp fragment with the HC followed by 2A sequence and LC. (iv) Finally, to generate ncSFV-pac-A20ires, we first used a similar strategy using primers 1 + 11 and primers 12 + 13 to generate two independent DNA fragments and primers 1 + 13 (in this case using as template a plasmid containing the IRES sequence 16 for crossover PCR, obtaining a construct with the LC fused to the internal ribosome entry site (IRES) from encephalomyocarditis virus, which was cloned into pGEM-T (pLC-IRES). Another PCR was performed with primers 4 + 14 to generate a fragment with the HC sequence that was subcloned into pLC-IRES generating pLC-IRES-HC. From this intermediate plasmid a 2826 pb fragment with the LC followed by the IRES sequence and HC was extracted with Xma I and sucbloned into ncSFV-pac2A. Plasmid pSFV-S2-9-pac, referred here as ncSFV-pac was used to generate control cell lines 14 . Selection of cell lines with ncSFVpac vectors. SFV-derived plasmids were linearized by digestion with SpeI and transcribed in the presence of cap analog (New England Biolabs, Ipswich, MA) using SP6 polymerase (New England Biolabs) 17 . Fifty µg of in vitro transcribed RNA were electroporated into 5 × 10 6 BHK-21 cells by electroporation as described previously 13 . After transfection, cells were allowed to recover for 24 - Analysis of protein expression. The amount of A20 mAb present in supernatants from cells transfected with ncSFV-pac-A20 vectors was quantified by a total mouse IgG ELISA kit (Mabtech, Sweden) using as standard A20 mAb purified from the A20 hybridoma cell line. This standard mAb was previously quantified by Bradford analysis. For Western blot experiments, supernatants from cells transfected with SFV vectors expressing A20 mAb were analyzed under reducing (with dithiothreitol, DTT) and non-reducing (without DTT) conditions in 8% or 12% polyacrylamide gels, respectively, incubating with a polyclonal goat antibody specific for mouse IgG conjugated with horseradish peroxidase (Sigma, St. Louis, MO). Cell lysates were also analyzed with rabbit polyclonal antisera specific for SFV nsp2 13 or for actin (Sigma). Proteins were visualized using the Western Lightning Chemiluminiscence Reagent Plus (Perkin Elmer Life Sciences, Waltham, MA). Purification of A20 mAb. A cell line selected with ncSFV-pac-A20sgPr vector was grown to a final quantity of approximately 2 × 10 8 cells, corresponding to six consecutive passages. Cells were first incubated with 500 ml EX-CELL™ CD CHO medium without FBS (Sigma) during 36 h at 33 °C. This medium was collected and then cells were incubated again with 500 ml of new medium for 24 h at the same temperature. Culture media from the two incubations were pooled and centrifuged at 1000g for 5 min. Recombinant mAb was purified by Protein A Sepharose column (HiTrap Protein A HP, GE Healthcare Bio-Sciences, Pittsburgh, PA) at 4 °C and at a constant speed of 1 ml/min during approximately 16 h using an ÄKTA protein purification system (GE Healthcare Bio-Sciences). The mAb was eluted with 100 mM glycine (pH 3). The presence of the mAb was analyzed at each purification step by SDS-PAGE followed by Coomassie staining or Western blot as described earlier. The purified mAb was gel digested with trypsin and protein identification was obtained by analysis of the digests in a coupled liquid chromatography and tandem mass spectrometry (LC-MS/MS). A20 mAb produced by the hybridoma cell line had been previously purified using a similar procedure. Analysis of A20 glycosylation. For glycosylation analysis, samples of purified mAb were treated with N-glycosidase (Calbiochem, San Diego, CA) according to the manufacturer's instructions. Briefly, samples were heated at 100 °C for 5 min, cooled to room temperature, and incubated with glycosidase during 3 h at 37 °C in the presence of 0.75% Triton X-100. After treatment, samples were analyzed by Western blot as described earlier. Vaccination studies. Purified A20 mAb was first conjugated to Keyhole Limpet Hemocyanin (KLH, Biosyn Corporation, Carlsbad, CA) as previously described 15 . Four-week-old Balb/c female mice (Envigo, Spain) were randomly distributed in three groups that were immunized with A20 mAb purified from hybridoma or ncSFVpac-A20sgPr cells, or with PBS. In the first two cases, mice received four subcutaneous immunizations, given once a week, of 25 µg of purified mAb conjugated with the same amount of KLH in combination with 10,000 U of GM-CSF (BD Pharmingen) in a total volume of 50 µl. Control mice received the same volume of PBS. In addition, at 24 h, 48 h, and 72 h after each A20 mAb vaccination, mice received 10,000 U of GM-CSF diluted in www.nature.com/scientificreports/ 50 µl of PBS which were administered subcutaneously close to the site of the vaccine injection (Fig. 5A ). All mice were retroorbitally bled before the first vaccination and 10 days after the last vaccine boost. Fifteen days after the last vaccine dose all mice were subcutaneously injected with 2 × 10 5 A20 lymphoma cells and tumor growth was determined at different time points by measuring two perpendicular diameters. Tumor volume was calculated with the formula: d 2 × D/2 where d = smaller diameter; D = larger diameter. One mouse out of 18 and one mouse out of 22 were excluded from the A20-SFV and PBS groups in Fig. 5A , since they were detected as outlayers using Prism software (GraphPad Software, San Diego, CA). Animal studies were approved by the Universidad de Navarra ethical committee (study 063/14-E44/15) for animal experimentation under Spanish regulations. This study was carried out in compliance with the ARRIVE guidelines. A20 specific ELISA. ELISA plates were coated with purified A20 mAb at a concentration of 10 µg/ml. After blocking with PBS containing 1% fat-free milk, plates were incubated with serial dilutions of mice sera (in PBS with 1% fat free milk). Finally, plates were incubated with horseradish peroxidase-conjugated anti mouse IgG1 (Pharmingen). Statistical analyses. Graphpad Prism software (version 9.2.0) was used for statistical analysis. Survival of tumor-bearing animals is represented by Kaplan-Meier plots and was analyzed by log-rank test. To compare tumor size in experimental groups, the Kruskal-Wallis test, followed by the Dunn multiple-comparison test, was used for nonparametric data. Generation and characterization of SFV-based stable cell lines expressing idiotype antibody A20. In order to generate mammalian stable cell lines expressing the Id A20, we cloned the genes coding for its heavy (HC) and light chains (LC) into ncSFV-pac vector as described in "Materials and methods". This RNA vector contains mutations P718T and R649H in the nsp2 subunit of the SFV viral replicase and expresses puromycin N-acetyl-transferase gene (pac) downstream of the viral subgenomic promoter, which allows selection of transfected cells in the presence of puromycin. Since efficient production of the mAb will require an optimal ratio of LC:HC 18 , we cloned their coding genes into ncSFV-pac using four different configurations, generating the following vectors: (i) ncSFV-pac-A20sgPr, in which HC is followed by LC using independent viral subgenomic promoters, (ii) ncSFV-pac-A20HLC, in which LC is followed by HC using independent viral subgenomic promoters, (iii) ncSFV-pac-A20-2A, in which HC is fused to LC using the foot and mouth disease virus 2A autoprotease sequence as a linker, and (iv) ncSFV-pac-A20ires, having LC and HC separated by an IRES sequence (Fig. 1) . RNA was synthesized in vitro from each ncSFV-pac2A-A20 vector, or from control ncSFV-pac empty vector, and electroporated into BHK cells. Twenty-four hours after electroporation, puromycin was added at 5 µg/ml. When selected cells reached confluency, they were passaged ten times in the presence of the antibiotic during a period of 30 days. The expression of recombinant mAb was analyzed after each passage by Western blot and specific ELISA in the supernatants of at least two independent selected cell lines obtained for each vector. This analysis showed that all SFV-based cell lines expressed an mAb of similar size to the one expressed by the A20 hybridoma ( Fig. 2A and Supplementary Fig. 1 ). In addition, expression of the A20 mAb was quite stable in all cell lines, with similar expression levels at early and late passages ( Fig. 2A) . The highest expression levels were obtained with vector ncSFV-pac-A20sgPr, reaching approximately 2 mg/10 6 cells/24 h. Expression levels were approximately 50% lower in cells lines generated with ncSFV-pac-A20HLC and ncSFV-pac-A20-2A vectors, and between 10-and 20-fold lower in the case of ncSFV-pac-A20ires cell lines. In this last case we observed a strong reduction in the expression of HC compared to LC, which could explain the lower mAb production in these cell lines (Supplementary Fig. 1 ). We selected a ncSFV-pac-A20sgPr cell line for A20 mAb production, since it showed the highest expression levels and a very good level of stability (Fig. 2B ). Purification and characterization of A20 Id. To purify the A20 Id, a cell line selected with ncSFV-pac-A20sgPr was grown to a final quantity of approximately 2 × 10 8 cells, corresponding to six consecutive passages. Cells were first incubated with 500 ml of medium without serum during 36 h. This medium was collected and then cells were incubated again with 500 ml of new medium for 24 h. Both supernatants were pooled and the mAb concentration was measured by ELISA, being approximately 1.75 µg/ml. The A20 Id was then purified using a Protein A Sepharose column as described in "Materials and methods". Most of the mAb was retained in the column, since no antibody signal could be detected by Western blot in the flow through (Fig. 3A) . The A20 Id was then eluted with 100 mM glycine (pH 3), obtaining a single elution peak as determined by UV absorbance. A yield of 1.6 mg/L of pure mAb was obtained from supernatants of ncSFV-pac-A20sgPr with a recovery of > 90%. Following a similar procedure, we purified the A20 Id from the supernatant of A20 hybridoma cells. Characterization of A20 Id. Protein identity was confirmed by LC-MS/MS analysis for A20 Id purified from both ncSFV-pac-A20sgPr and hybridoma A20 cell lines. In both cases this technique allowed us to identify a great number of peptides corresponding to a IgG2a HC and a kappa LC, which are the type of chains present in A20 Id (data nor shown). The size and correct assembly of the mAb was verified by SDS-PAGE electrophoresis followed by Western blot with an anti mouse IgG antibody (Fig. 3A) and Coomassie staining (Fig. 3B) . When samples containing different amounts of the mAbs were analysed in non-reducing conditions, a single high molecular weight (MW) band of > 165 kDa was detected in both analyses, corresponding to the fully assembled antibody (Fig. 3, upper gels) . As expected, when the same samples were analyzed under reducing conditions, only bands corresponding to HC and LC chains were detected (Fig. 3 lower gels) . The absence of other bands in www.nature.com/scientificreports/ the Coomassie analysis confirmed the high purity of the mAb (Fig. 3B) . The apparent MW of the fully assembled mAb and the HC and LC chains was higher than expected (theoretical MW for mAb: 122.7 kDa, HC: 49 kDa, and LC: 12.38 kDa), which suggested a possible post-translational modification for both chains. To check if this higher molecular size was due to glycosylation, purified mAbs were treated with N-glycosidase as described in "Materials and methods" and analyzed by SDS-PAGE under reducing conditions. Removal of N-linked oligosaccharides increased the apparent electrophoretic mobility for both HC and LC, being more evident in the latter case (Fig. 4) . This study showed that the A20 Id produced from the ncSFV-based BHK cell lines and the one produced from the hybridoma cell lines showed very similar characteristics. www.nature.com/scientificreports/ Vaccination of mice with idiotype antibody A20. In order to check whether purified A20 mAbs could be used as Id vaccines, we first conjugated each antibody with KLH as described in "Materials and methods". We then vaccinated a group of Balb/c mice with four subcutaneous doses of 25 µg of KLH-conjugated A20 Id produced in ncSFV-pac-A20sgPr cells, which were given once a week in combination with 1000 units of GM-CSF. Mice also received three additional doses of GM-CSF at 24 h, 48 h, and 72 h after each vaccination (see diagram in Fig. 5A) . A second group of mice was vaccinated with KLH-conjugated A20 Id produced by A20 hybridoma cells following the same protocol. Finally, a control group was vaccinated with PBS. Animals were bled 10 days after the last vaccination and anti-A20 antibody levels were evaluated by specific ELISA (Supplementary Fig. 2 ). This analysis showed that mice vaccinated with the purified Id developed specific anti-Id antibodies, which had similar levels in mice receiving the A20 Id from ncSFV-based cell or hybridoma cells. Fifteen days after the last vaccine boost all mice were challenged subcutaneosly with A20 lymphoma cells and tumor size and survival were followed. As can be observed in Fig. 5B , vaccination of mice with purifed A20 Id resulted in a clear antitumor effect which was very similar in mice receiving the mAb from ncSFV-engineered cells or hybridoma cells. In addition, these two groups of mice showed a similar and significantly higher survival compared to control mice (Fig. 5C) . These results demonstrate that the ncSFV system could be useful to produce personalized effective Id vaccines against lymphoma in an easy and quick way. A very attractive approach to fight cancer is the possibility of inducing specific immune responses against tumor cells, leading to their destruction without affecting healthy tissues. Unfortunately, only a few tumor antigens have been identified that could be used as immunogens, or that could be targeted by mAbs or genetically modified T cells. However, a new area of research, that has expanded dramatically in recent years, has focused on the development of personalized therapeutic cancer vaccines based on the identification of neoantigens in tumor cells 19 . This strategy allows to design a specific vaccine for each patient, usually based on the administration of polypeptides containing several neoantigens with non-synonymous somatic mutations. The ultimate goal of these vaccines is the generation of antigen-specific CD8+ T cells able to recognize and destroy tumor cells. A particular case of specific tumor antigen is the Id present in B-cell lymphomas. Ids are specific for each patient and can be easily identified since they are part of the unique mAb expressed by all lymphoma cells. The idea that Ids can be used to generate anti-idiotype (anti-Id) antibodies was initially proposed by Niels Jerne 20 . Since then, several anti-Id vaccines have been developed based on the use of anti-Id as surrogate antigens. Anti-Id vaccines have shown efficacy in both preclinical and clinical studies, being able to induce both humoral and cellular immune responses against tumor antigens 5 . Although their therapeutic efficacy has been generally modest, an anti-Id vaccine was approved in 2016 in Cuba and Argentina 21 . This vaccine, called Racotumomab (Vaxira), was raised against murine anti-ganglioside N-glycolyl (NGc) GM3 and has shown to be able to increase survival in non-small cell lung cancer patients. While most anti-Id vaccines are based on mAbs, several studies have shown that polyclonal anti-Id vaccines could be more efficient, since they could function as surrogates of multiple epitopes from the same antigen 5 . In the case of B-cell lymphomas, Id vaccination could in principle stimulate polyclonal responses against the variable region of the Id, leading to potent cancer responses 4 . As mentioned earlier, an important problem to generate Id vaccines against B-cell lymphomas is the production of sufficient amounts of the Id for immunization in a short period of time. In the present study we have developed a new and quick method to produce Ids based on the generation of mammalian cell lines using a noncytopathic self-replicative RNA vector derived from SFV (ncSFV). This vector encodes a puromycin resistance gene which allows for quick selection of transfected cells in the presence of that antibiotic. One of the main advantages of this system is that is fully dependent on cytoplasmic RNA replication, in contrast to more conventional methods of stable cell selection based on plasmid DNA integration. The latter approach is timeconsuming and usually rely on the selection of high expressing clones 22 . We have previously shown that the ncSFV vector could be used to generate stable cells expressing human proteins with therapeutic potential, such as insulin-like growth factor I and cardiotrophin-1. Interestingly, these cell lines showed high stability, maintaining protein expression levels during at least ten passages, and with a very low mutation rate in the transgene 14 . In the present study we have applied the same technology to generate stable cell lines expressing the Id produced by mouse lymphoma A20. Production of a full-length antibody requires expression of two different polypeptides in cells, i.e. the heavy (HC) and light chains (LC), which will assemble into a heterotetrameric protein. Several studies suggest that optimal expression of an antibody requires a ratio of LC:HC greater than one 18, 23 , although the optimal ratio could depend on the cell line 23 . In order to obtain an optimal Id expression, we tested several vector configurations to express both HC and LC from the same ncSFV vector. The highest expression levels were obtained when we placed each antibody chain under independent SFV subgenomic promoters, especially if LC was upstream of HC (ncSFV-pac-A20sgPr). In this case, two different subgenomic RNAs will be produced, each one translating one of the mAb chains. This strategy has been previously used by us to express the two subunits of interleukin-12 (p35 and p40) from a cytopathic SFV vector, resulting in high expression levels of this heterodimeric cytokine 16 . The use of a 2A self-cleaving peptide placed between LC and HC led to slightly lower antibody levels, despite the fact that this strategy has been extensively used to express two proteins at similar levels 24 and was succesfully used to express an antiPD-L1 mAb from a cytotopathic SFV vector 25 . It is possible that in our case the fact that the vector contains another 2A sequence between pac and HC, could decrease the total amount of LC released from the polyprotein, as suggested by the Western blot analysis shown in Supplementary Fig. 1 . Interestingly, the use of an IRES element between LC and HC resulted in very low levels of HC, leading to low production of the antibody (Fig. 2 and Supplementary Fig. 1 ). This correlates with previous observations in which expression of the www.nature.com/scientificreports/ two interleukin-12 subunits separated by the same IRES, using an SFV vector, led to much lower expression of the cytokine compared to the use of independent subgenomic promoters 16 . Based on this initial characterization, a cell line selected with ncSFV-pac-A20sgPr vector was chosen for production and purification of A20 Id. The purified mAb showed a very similar size and glycosylation pattern compared to the one produced by hybridoma cells, which are also of mammalian origin (Fig. 4) . Antibodies are usually highly N-glycosylated and this type of post-translational modification could affect their stability and immunogenicity 26 . In this regard, maintaining a mammalian glycosylation pattern could be an advantage of our system versus production methods based on insect cells or plants, although in the latter case targeted manipulation of plant N-glycosylation pathways, has enabled production of proteins with mammalian-like oligosaccharides 27 . The production yield of our system was not excessively high, reaching 1.6 mg/L/24 h after purification. However, given that in most clinical trials patients have been immunized with Id doses in the range of 0.5-2 mg 28 , our method would be efficient enough to generate the required amount of recombinant Id for each patient from a relatively low culture volume (1-2 L). Immunization of mice with A20 Id produced by the ncSFV system resulted in antitumor effects that were very similar to the ones observed in mice immunized with A20 produced by a hybridoma cell line, confirming that both Ids have similar properties and validating our system for production of Id vaccines. An interesting alternative for protein-based Id vaccines is the use of genetic vaccines, which can be administered as DNA, mRNA, or viral vectors. In this type of vaccines, the antigen (Id) is expressed in vivo by transfected/ infected cells, which could potentiate cellular immune responses, especially when these vectors are targeted to antigen presenting cells. This approach has been validated for B-cell lymphoma in a preclinical mouse model immunized with an adenovirus vector expressing A20 Id 6 and will be tested in clinical trials against B-cell lymphomas using DNA vaccines encoding patient-specific Ids linked to immunostimulatory sequences 29, 30 . Regarding mRNA vaccines, the recent success of Covid-19 vaccines based on mRNAs expresing the spike protein of SARS-CoV-2, makes this approach very interesting for Id vaccination. These vaccines rely on complexing the mRNA with cationic lipid nanoparticles that facilitate entry into cells. This approach could also be used for in vivo delivery of a self-replicating RNA expressing an Id, like the one used in this study, something that could increase its expression and stimulate innate immune responses, potentiating antitumor responses 31 . Received: 21 May 2021; Accepted: 13 October 2021 Developing idiotype vaccines for lymphoma: From preclinical studies to phase III clinical trials Vaccine strategies for the treatment of lymphoma: Preclinical progress and clinical trial update A clinical trial of anti-idiotype therapy for B cell malignancy Monoclonal anti-idiotype antibody therapy of B-cell lymphoma: The addition of a short course of chemotherapy does not interfere with the antitumor effect nor prevent the emergence of idiotype-negative variant cells The promise of anti-idiotype revisited Idiotype-encoding recombinant adenoviruses provide protective immunity against murine B-cell lymphomas Immunization with a recombinant adenovirus encoding a lymphoma idiotype: Induction of tumorprotective immunity and identification of an idiotype-specific T cell epitope Idiotype vaccines for lymphoma: Proof-of-principles and clinical trial failures Idiotype vaccines for lymphoma therapy Alphavirus-based antigen preparation Novel Semliki Forest virus vectors with reduced cytotoxicity and temperature sensitivity for long-term enhancement of transgene expression Recent patents on alphavirus protein expression and vector production Development of a new noncytopathic Semliki Forest virus vector providing high expression levels and stability A novel system for the production of high levels of functional human therapeutic proteins in stable cells with a Semliki Forest virus noncytopathic vector Idiotype vaccine production using hybridoma technology Semliki forest virus vectors engineered to express higher IL-12 levels induce efficient elimination of murine colon adenocarcinomas A new generation of animal cell expression vectors based on the semliki forest virus replicon Control of IgG LC: HC ratio in stably transfected CHO cells and study of the impact on expression, aggregation, glycosylation and conformational stability Personalized cancer vaccines: Clinical landscape, challenges, and opportunities Towards a network theory of the immune system Characterization of the antibody response against NeuGcGM3 ganglioside elicited in non-small cell lung cancer patients immunized with an anti-idiotype antibody Production of recombinant protein therapeutics in cultivated mammalian cells Analysis of IgG heavy chain to light chain ratio with mutant Encephalomyocarditis virus internal ribosome entry site E unum pluribus: Multiple proteins from a self-processing polyprotein Short-term local expression of a PD-L1 blocking antibody from a self-replicating RNA vector induces potent antitumor responses Therapeutic monoclonal antibody N-glycosylation-Structure, function and therapeutic potential N-Glycosylation of plant-produced recombinant proteins Clinical safety and Immunogenicity of tumor-targeted, plant-made id-klh conjugate vaccines for follicular lymphoma Phase I clinical trial of idiotypic DNA vaccine administered as a complex with polyethylenimine to patients with B-cell lymphoma Phase I study of an active immunotherapy for asymptomatic phase Lymphoplasmacytic lymphoma with DNA vaccines encoding antigen-chemokine fusion: Study protocol A new generation of vaccines based on alphavirus self-amplifying RNA We are grateful to personnel at the Animal Facility of Cima Universidad de Navarra. We also thank Dr. Juan José Lasarte and Marta Gorraiz (Cima Universidad de Navarra) for help with Id purification. This work was supported by the following grants: Instituto Salud Carlos III financed with Feder Funds PI17/01859 and PI20/00415 ("A way to make Europe"), Gobierno de Navarra. Departamento de Salud 64/2019 (co-financed at 50% by the European Regional Development Fund through the FEDER Operational Program 2014-2020 of Navarra: "European Union. European Regional Development Fund. A way to make Europe"). MCBB received a Fundación Echébano fellowship, and NSP received a "Ayudas predoctorales de investigación biomédica AC" fellowship. The authors declare no competing interests. The online version contains supplementary material available at https:// doi. org/ 10. 1038/ s41598-021-00787-5.Correspondence and requests for materials should be addressed to C.S. Publisher's note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http:// creat iveco mmons. org/ licen ses/ by/4. 0/.