key: cord-1001667-69nfi379 authors: Lacy, J. Matthew; Brooks, Erin G.; Akers, Joshua; Armstrong, Danielle; Decker, Lauren; Gonzalez, Adam; Humphrey, William; Mayer, Romana; Miller, Matthew; Perez, Catherine; Arango, Jose Antonio Ruiz; Sathyavagiswaran, Lakshmanan; Stroh, Wendy; Utley, Suzanne title: COVID-19: POSTMORTEM DIAGNOSTIC AND BIOSAFETY CONSIDERATIONS date: 2020-04-24 journal: Am J Forensic Med Pathol DOI: 10.1097/paf.0000000000000567 sha: 6b45aa983702a9425fd6604470b931906f12b19c doc_id: 1001667 cord_uid: 69nfi379 As a result of the 2019 novel human coronavirus (COVID-19) global spread, medical examiner/coroner offices will inevitably encounter increased numbers of COVID-19-infected decedents at autopsy. While in some cases a history of fever and/or respiratory distress (e.g. cough or shortness of breath) may suggest the diagnosis, epidemiologic studies indicate that the majority of individuals infected with COVID-19 develop mild to no symptoms. Those dying with—but not of—COVID-19 may still be infectious, however. While multiple guidelines have been issued regarding autopsy protocol in cases of suspected COVID-19 deaths, there is some variability in the recommendations. Additionally, limited recommendations to date have been issued regarding scene investigative protocol, and there are a paucity of publications characterizing COVID-19 postmortem gross and histologic findings. A case of sudden unexpected death due to COVID-19 is presented as a means of illustrating common autopsy findings, as well as diagnostic and biosafety considerations. We also review and summarize the current COVID-19 literature in an effort to provide practical evidence-based biosafety guidance for ME/C offices encountering COVID-19 at autopsy. respectively. 1 Based on currently available global data, COVID-19 is thought to cause mild, limited, or no symptoms in at least 80% of those infected. [2] [3] [4] A substantial portion of COVIDinfected individuals are suspected to be asymptomatic carriers; estimates derived from select populations of quarantined individuals who underwent widespread testing (e.g. cruise ship passengers and Japanese citizens evacuated from China) range from 18-33%. [5] [6] Of those known to be COVID-19 positive, approximately 20-30% will develop more severe disease necessitating hospitalization. Such disease may progress to acute respiratory distress syndrome (ARDS), sepsis, multiorgan failure, and death. [7] [8] [9] Risk factors for severe disease have been reported to include advanced age, hypertension, and diabetes-although recent data suggests hospitalization may be more common among younger COVID-19 patients than previously suspected. [7] [8] Case fatality ratios range widely from 0.2-7.7% depending on the population age, prevalence of comorbidities, testing criteria and availability, health care capacity, and how cases are defined. 10-13 A variety of electronic databases provide ongoing daily monitoring of COVID-19 cases tabulated by country. 14-16 Inevitably there will be an increased number of suspected or confirmed COVID-19 deaths encountered at autopsy. While multiple guidelines have been issued regarding autopsy protocol in cases of suspected or confirmed COVID-19 deaths, there is some variability in the recommendations. [17] [18] [19] [20] [21] Additionally, limited recommendations to date have been A C C E P T E D 5 issued regarding scene investigative protocol. We present a case of sudden unexpected death due to COVID-19 as a means of illustrating suggestive autopsy findings, diagnostic considerations, and recommended scene and morgue biosafety practices in novel coronavirus deaths. History A 58-year-old woman reported a week of fevers and respiratory difficulty. Her medical history was significant for insulin-dependent type 2 diabetes mellitus (hemoglobin A1c range: 7 -11%), obesity, hyperlipidemia, mild intermittent asthma, and chronic lower extremity swelling with ulceration. She was instructed to stay home and self-quarantine by her retail store employer. She was found dead in her bedroom after last being known alive the night before. Emergency medical services responded to the scene and attempted resuscitation before pronouncing death and notifying the medical examiner's office. Two medicolegal death investigators performed a scene investigation. Family members were interviewed outside the residence, eliciting the information that several of the decedent's coworkers and an adult member of her household had also developed respiratory illness symptoms. At least 6 feet (i.e. 2 meters) of separation was maintained between investigators and family members during interview. Prior to entering the residence, investigators donned personal protective equipment (PPE) sufficient for contact and droplet precautions including gloves, fluidresistant gown, a barrier face mask and goggles. 17-18, 20 A camera was employed to document the scene photographically; otherwise, minimal equipment was brought into the residence. Following A C C E P T E D documentation, the body was examined and placed in a plastic shroud and then sealed in a body bag and loaded into the transport vehicle. After the body was secured, investigators doffed their PPE and performed hand hygiene with an alcohol-based gel. The body was then transported to the morgue and logged in without opening the outer body bag. The transport vehicle was disinfected with a dilute bleach solution. An autopsy was performed in a separate negative pressure isolation suite adjacent to the main morgue room but on its own heating, ventilation and air-conditioning (HVAC) circuit with 16 air changes per hour. Only two operators (i.e. a pathologist and a technician) were permitted in the isolation suite during the case. A second technician acted as a circulator and monitored the case via an observation window; communication was facilitated via inexpensive low-power walkie-talkies. A small isolation cooler attached to the isolation room acted as an airlock to facilitate transfer of materials into and out of the isolation suite during the prosection (Fig. 1 ). In accordance with guidelines, PPE utilized by autopsy prosectors included scrubs, dedicated autopsy footwear with shoe covers, a long-sleeve water resistant gown or Tyvek suit, a long-sleeved splash apron, double gloves and cut gloves, hair covers, and a powered air-purifying respirator (PAPR) with full-face shield (Fig. 2 ). 17-21 Grossly soiled PPE was frequently wiped down with disinfectant wipes or dilute bleach solution during the procedure. Doffing of PPE at the end of the procedure occurred in the isolation cooler airlock and was monitored by an inspector. The autopsy was performed with minor modifications to standard procedures. In order to minimize potential organism aerosolization, the sink-mounted vacuum aspirator, sink drain tissue grinder, and station hose were not used. All fluid collections were ladled from body cavities. Although the head was opened with a powered oscillating saw, the upper half of the body, head of the table, and floor surrounding these areas was misted with disinfectant immediately upon cessation of powered sawing and before brain removal. Only one prosector remained in the room during the sawing; for at least 10 minutes afterwards (i.e. 2 full air changes) no additional personnel entered the room. Cleaning of the body and autopsy table was accomplished with towels that were subsequently discarded. Limited body and specimen photography was accomplished either in situ or on a small photography board near the body. Following autopsy, the body was closed in the standard fashion and cleaned with damp towels and disinfectant. A clean body table with a clean body bag and plastic shroud spread out on it had been placed in the isolation cooler airlock by the second technician. This was moved into the isolation suite and the body was transferred onto the clean shroud, wrapped tightly and sealed with tape, then zipped into the clean body bag. This procedure allowed the outer surfaces of the shroud and body bag to remain essentially clean. Once sealed, the outer bag was labeled and signed by the pathologist and technician, each verifying the identity of the decedent. The outer surface of the body bag was then sprayed with disinfectant and the body table was removed to the isolation cooler where residual liquid disinfectant was removed and the bag labeled as infectious. Release procedures were modified to prevent opening the body bag or shroud for visual identification confirmation by funeral home staff while the body was still in the facility. The dual signatures of the pathologist and technician acted as the confirmation that the body bag contained the correct decedent, and release to the funeral home was performed without opening the outer bag. The infectious nature of the case was disclosed to the funeral home personnel at the time of release. Notably, none of the personnel involved in this index case (i.e. pathologist, technicians, scene investigators) suffered any symptoms consistent with COVID infection in the two weeks following their involvement in the case nor since. External examination revealed an obese (BMI: 38 kg/m 2 ) middle-aged adult woman with fully developed rigor mortis and blanching livor mortis. Changes of lower extremity venous stasis and scarring consistent with the history of lower leg ulcers were present. On internal examination there were no pleural effusions or other abnormal fluid collections. Thick mucus was noted in the airways, however. The lungs were moderately heavy and edematous (right: 818 g, left: 705 g) and had a relatively firm texture throughout. Areas of hemorrhage were evident in the right upper and middle lobes, and to a lesser extent in the left lower lobe (Fig. 3 .) Hilar and mediastinal lymph nodes appeared enlarged. The heart weighed 438 g and exhibited moderate coronary atherosclerosis in each of the main coronary distributions, but there were no occlusions or critical stenoses. The myocardium was free of obvious infarcts and had the expected firm texture and red-brown color. The left ventricle was 1.2-1.4 cm thick. The cardiac valves were normal. There was moderate infrarenal A C C E P T E D aortic atherosclerosis. The kidneys were finely granular and had focal cortical scars (right 170 g, left 183 g). The spleen had a normal appearing capsule and parenchyma (148 g). The liver (1990 g) was grossly unremarkable. The brain (1221 g) exhibited hydrocephalus ex vacuo; the frontal horns measured 2.8 cm in greatest dimension at the level of the temporal poles. Tissue sections were placed in 10% neutral-buffered formalin and allowed to fix for 72 hours prior to histologic sampling. Hematoxylin and eosin (H&E) staining was performed by an outside laboratory. Histologic examination of the lungs revealed diffuse proteinaceous edema and dense amphophilic concretions along alveolar septae consistent with hyaline membranes. The lung architecture was preserved and the septae were of normal thickness, but mild mononuclear infiltrates were present throughout. There was prominent desquamating pneumocyte hyperplasia with focal multinucleated cells and bizarre forms. Acute alveolar hemorrhage and collections of reactive foamy alveolar macrophages were focally present as were collections of alveolar fibrin Based on the above autopsy and investigative findings, and in accordance with US National Vital Statistics certification guidelines, the cause of death was determined to be acute respiratory distress syndrome due to viral pneumonia due to COVID-19. 22 Other significant contributory factors included type 2 diabetes mellitus, hypertension, and obesity. The state department of health was notified. Currently every state in the U.S. has reported COVID-19 cases, resulting in a total of over 7600 deaths to date. 23 Inevitably ME/C offices will encounter increased numbers of SARS-CoV-2 infected decedents at autopsy as a result of COVID-19 spread. While in some cases a history of fever and/or respiratory distress (e.g. cough or shortness of breath) may suggest the diagnosis, epidemiologic studies indicate that the majority of individuals infected with COVID-19 develop mild to no symptoms. 2 Even those dying with-but not of-COVID-19 may still be infectious. Transmission of SARS-CoV-2 from presymptomatic/asymptomatic individuals has been documented, although the frequency remains to be established. 24-27 ME/C must use their judgment to determine whether postmortem COVID-19 testing and/or autopsy should be pursued. In addition to suggestive antemortem signs/symptoms, epidemiologic factors may also help guide decisions such as history of contact with a known COVID-19 positive case, or being a part of a cluster of respiratory illness cases in a closed setting (e.g., a nursing care facility). 17 The presented autopsy case and literature review are intended to help familiarize ME/C offices with COVID-19 disease features, diagnostic strategies, and key biosafety principles. It is suspected that SARS-CoV-2-similar to SARS-CoV and MERS-CoV-began as a zoonotic coronavirus that subsequently spread to humans. 1 Community and healthcare-associated person-to-person transmission were documented early in the pandemic, and direct or close contact with infectious persons is believed to be the major mode of transmission. [28] [29] Transmission occurs through exposure to infectious droplets originating from the respiratory tract; infectious droplets may be released from an infected individual via sneezing, coughing, talking or undergoing an A C C E P T E D aerosolizing procedure such as intubation or autopsy. [30] [31] Reportedly droplets do not typically spread beyond 6 feet (2 meters) nor linger in air, although some evidence has suggested a longer range of spread may be possible. [31] [32] Less commonly infection may arise as a result of indirect transmission through fomites, especially if the eyes, face, or mouth are contacted after touching an infected surface. 31, 33 SARS-CoV-2 has also been detected in blood and anal swabs; increasing evidence suggests that fecal-oral transmission may be another potential route of spread. [34] [35] [36] Scene Investigation As in the current presented case, investigators are advised to mitigate risk of potential SARS-CoV-2 exposure at death scenes by standing at a distance > 6 feet when conducting interviews and requesting interviewees to remain outside the residence while investigators enter. As the CDC has recently issued recommendations for the public to wear cloth facial coverings when at risk of social-based transmission, scene investigators may consider encouraging interviewees to don cloth facial masks. 37 Scene investigators should don contact and droplet precaution PPE when entering residences. Decontamination of all potentially contaminated equipment, careful body bagging procedures, and investigator hand hygiene are also encouraged. Anecdotally, this has been the scene investigative policy of the Snohomish County Medical Examiner's Office which despite being the country with the second highest number of positive/confirmed COVID cases in the state of Washington has had no scene investigators test positive for SARS-CoV-2 to date. In order to more efficiently triage cases, ME/C offices may elect to have scene investigators procure nasopharyngeal viral testing swabs at the scene. Scene investigative recommendations are summarized in Table 1 . Each office is advised to carefully assess its own infrastructure, supplies, and staffing to determine whether suspected or confirmed COVID-19 deaths can be safely prosected on-site. Current CDC and WHO recommendations are that suspected/confirmed COVID-19 autopsies be prosected in an airborne infection isolation rooms at negative pressure relative to surrounding areas, and ideally with at least 12 air changes per hour (though 6 will suffice in older structures.) with HEPA filter is also indicated. [17] [18] [19] [20] [21] Given national PPE supply limitations, ME/C offices are encouraged to restrict autopsy attendance to key personnel only (i.e. prosector and technician). 38 In order to preserve eyewear, preferential use of powered air purifying respirators or goggles which can be reused following appropriate disinfection should be considered. 39 In general, PAPRs are preferable to N95 respirator masks as they provide even higher protection to prosectors and-with appropriate disinfection of reusable elements after use-can be repeatedly employed thus assisting with PPE conservation efforts. 40 PAPR filters should be replaced in accordance with manufacturer recommendations. Some studies have suggested the possibility of decontaminating and reusing A C C E P T E D N95 masks via ultraviolet germicidal irradiation (UVGI), hydrogen peroxide vapor sterilization, and simply allowing respirators to hang to dry for 3 days. 38, [41] [42] [43] [44] [45] Proposals for respirator mask construction have also been offered. 38 Further details regarding PPE conservation strategies are beyond the bounds of the current review but are available through the CDC. 39 Aerosol generation at autopsy may occur through inadvertent splashing of fluids, puncturing of fluid pockets under pressure, and use of vacuum-assisted suction devices and sinkmounted tissue grinders. [38] [39] [40] [41] [42] However, the most likely aerosol generating autopsy procedure is use of powered oscillating bone saws, particularly during brain removal. [46] [47] [48] [49] [50] High densities of aerosolized particles are generated in the region of the saw placing the user at risk. While N95 respirator masks physically filter 95% of particles at least 1m in size from the inspired air, CDC and OSHA guidelines nonetheless suggest avoiding use of an oscillating bone saw at autopsy in cases of suspected/confirmed COVID-19. If a saw is employed, it is recommended that a vacuum shroud be attached to assist in capturing aerosols. 17-18 Other oscillating saw aerosol reduction techniques to consider include moistening the saw blade before cutting, using autopsy tables with built-in ventilation, tenting plastic around the decedent's neck and head to entrap aerosols, and wearing a HEPA-filtered PAPR rather than N95 mask. [46] [47] [48] [49] As in the current presented case, other general splash and aerosol reduction techniques (e.g. eschewing use of vacuum assisted aspirator, sink tissue grinder, or hose) are also advised. Autopsy protocol recommendations are summarized in Table 2 . While much literature has been published regarding COVID-19 signs/symptoms and clinical course, there is currently a paucity of data regarding expected postmortem gross and histologic findings. The case presented herein adds to those few previously published studies. Lungs are often heavy and histologically reveal edema with focal/diffuse hyaline membrane formation, pneumocyte hyperplasia, patchy mononuclear inflammatory infiltrates, some multinucleated cells, and a lack of definitive intranuclear or intracytoplasmic viral inclusions. [51] [52] Overall, pulmonary pathologic features generally appear consistent with early/organizing diffuse alveolar damage, and resemble those seen in SARS autopsies .51-53 While myocarditis has been reported in association with COVID-19, it appears to be a less common complication. [54] [55] Most typically (as in the presented case) minimal mononuclear myocardial inflammatory involvement is found. Rarely, COVID-19 associated encephalitis has been reported. 56 In one experimental study, viable SARS-CoV-2 was detected up to 72 hours after being placed onto plastic and stainless steel surfaces; it also remained viable in an experimentally created aerosol for at least 3 hours, although infectious titers per liter of air decreased over time. 57 A recent review and analysis of literature found that generally human coronaviruses can remain infectious for up to 9 days on inanimate surfaces, depending on surface type and temperature; at temperatures > 30° C (i.e. 86° F) viral persistence shortened. 58 Given that SARS-CoV-2 may remain viable on a variety of inanimate surfaces for a matter of days, careful morgue decontamination procedures are key. Surface disinfection with diluted household bleach solutions (i.e. of 0.1% sodium hypochlorite), 0.5% hydrogen peroxide solutions, or alcohol solutions (i.e. with at least 70% A C C E P T E D ethanol) have been shown to inactivate human coronaviruses within 1 minute. [58] [59] For hospitalgrade disinfectants, staff should verify their suitability for use against SARS-CoV-2 and ensure disinfectants remain on surfaces in accordance with US Environmental Protection Agency recommendations. [60] [61] While conclusive data regarding how long infectious human remains may harbor infectious SARS-CoV-2 is lacking, autopsies in cases of SARS found that SARS-CoV could be recovered from lung tissue and grown in cell culture up to seven days after death. [62] [63] Considering that there is reportedly 75-80% similarity between the viral genomes of SARS-CoV-2 (causative agent of COVID-19) and SARS-CoV (causative agent of SARS), these results suggest that protective precautions are called for even in cases of delayed suspected COVID-19 death investigations or autopsies. 1, 64 While limited data exists regarding formalin inactivation of SARS-CoV-2 infected tissue, formalin fixation at room temperature has been shown to inactivate most of SARS-CoV (i.e. close to assay detection limits) within a day. [64] [65] Diagnosis In cases of suspected COVID-19 in which full autopsies are performed, submission of SARS-CoV-2 swabs from both upper and bilateral lower respiratory tracts is recommended by the CDC. 17 If nasopharyngeal as well as bilateral tracheobronchial/lung swabs are procured it is recommended they be submitted in separate vials each containing 2-3 ml of viral transport medium. 17 ME/C offices, however, must be cognizant of their current state health department testing capacity and proceed accordingly. 17,19 A rational strategy for minimizing the number of swab submissions per autopsy is to submit swabs only from the lower respiratory tract. Additionally, sampling both lungs with a single swab may increase recovery of viral RNA. Concurrent testing for other causes of respiratory illness such as influenza is also strongly 17, 19 In order to preserve limited viral testing kit supply, ME/C offices are encouraged to communicate with their testing laboratories to verify whether COVID-19 as well as other respiratory viral pathogen testing can be performed on a single swab. Prosectors should submit a separate samples for bacterial/fungal organisms as indicated. In cases of suspected COVID-19 in which autopsy is not performed, nasopharyngeal swab testing for COVID-19 as well as other respiratory pathogens is recommended. 17 Only synthetic fiber swabs with plastic shafts should be submitted for SARS-CoV-2 reverse-transcriptase polymerase chain reaction (RT-PCR) testing, as others may inactivate virus or otherwise inhibit the testing. In the event that swabs were not procured at autopsy, fixed autopsy tissue specimens may also be submitted to CDC in suspected COVID-19 deaths for immunohistochemical, molecular, or other assay characterization. 17 Recent diagnostic advancements include the Food and Drug Administration (FDA) emergency use authorization (EUA) enabling US laboratories already certified for high complexity testing to develop and validate their own SARS-CoV-2 testing; this markedly augmented diagnostic capability as previously all testing was performed mainly by US public health laboratories. 66 Additionally, there has been EUA approval of rapid COVID-19 PCR diagnostic tests that some manufacturers report can deliver results in less than an hour. 67 Recently, a serologic enzyme-linked immunosorbent assay (ELISA) testing to assess for COVID-19 antibodies has received FDA approval and more are in development; these are expected to prove of utility in more accurately calculating disease transmission and mortality rates. 67-69 Previous surveys have indicated that morgues are heterogeneous in their preparedness to handle highly infectious disease cases. 70-71 Facility environmental controls, availability of personal protective equipment (PPE), and staffing are all factors that ME/C must carefully assess in determining whether suspected/confirmed COVID-19 deaths will be autopsied. 17, 19 The majority of known COVID-19 deaths technically should not fall under ME/C office jurisdiction as they are natural deaths predominantly occurring in hospitalized patients. 72 While autopsy is unlikely to be necessary in such cases-and is, in fact, discouraged by OSHA-ME/C may nonetheless be called upon to facilitate death certification ensuring accurate public health disease tracking, or in cases of medicolegal significance (homicides, accidents or suicides) where a decedent expires in the hospital and is COVID-19 positive due to community spread. 18, 72 In deaths occurring outside of the hospital setting ME/C offices are tasked with determining whether deaths are attributable to COVID-19 or not, and performing autopsies as needed. 72 ME/C offices may elect to triage cases by taking viral NP swabs in suspected COVID-19 deaths and reserve autopsy for those decedents with negative testing results or else cases in which SARS-CoV-2 infection is thought to be incidental rather than the cause of death. Performing a nasopharyngeal (NP) swab for SARS-CoV-2 requires neither a negative pressure room nor N95 respirator; basic contact and droplet precaution PPE are sufficient. 17 In cases in which autopsy is merited, the above described precautions should be followed to prevent morgue staff-acquired COVID-19 infection. Some offices have elected to perform limited autopsies (e.g. precluding brain/spinal cord removal) in cases of suspected/known COVID-19 positivity to reduce morgue staff aerosol exposure. Others have incorporated antemortem or postmortem CT radiology as a A C C E P T E D means of helping triage decedents meriting testing and/or autopsy. 19,21 Establishing collaborative relations with larger ME/C offices capable of safely autopsying suspected highly infectious disease cases should be encouraged. Globally, mobile biosafety autopsy facilities/laboratories with sophisticated infrastructure have been deployed during disease epidemics such as SARS and Ebola virus; advantages include the ability to mobilize rapidly to areas of need with minimal footprint. [73] [74] [75] Such mobile facilities may be advisable in the US as well. Neither CDC nor WHO guidelines require double-bagging of known COVID-19 positive decedents; however, ME/C offices should ensure that any body fluids leaking from orifices are contained. 17,20 Utilizing cotton packing of orifices, a plastic shroud, or a second body bag are all potential methods of preventing fluid leakage. Following appropriate decontamination of the body bag, a method of clearly designating the infectious nature of contents to funeral home personnel should be employed (e.g. body bag notification sticker); ME/C offices may want to consider modifying body release procedures to preclude contamination risks of opening body bag in morgue for funeral personnel identification. 76 Cases  Employ social distancing practices during scene interviews outside the residence  Require interviewees to remain outside when entering residence  Doff contact and droplet precaution PPE during scene investigations  If COVID-19 testing is warranted, consider obtaining NP swab at scene to expedite process  Minimize exposure of excess personnel or equipment to scene  Decontaminate exposed equipment and vehicles  Perform hand hygiene after any unprotected contact with a potentially infectious surface and after doffing PPE  Ensure bodies are fully enclosed in secure bag during transport to reduce change of leakage  Do not expose the body until it is in an isolation suite A C C E P T E D Table 2 Table 2  Prosect cases in negative pressure isolation suite with at least 6-12 air changes per hour  Doff contact and droplet precaution PPE, as well as N95 respirator or PAPR  Limit personnel in the isolation suite to the minimum necessary to perform the examination  Employ splash and aerosol reduction techniques during prosection; oscillating saws are discouraged but if used should have vacuum shroud attachment  Use caution when handling sharps; allow only one person to prosect at a given time  Ensure a technician is outside isolation room to monitor procedure and provide support as needed  Procure synthetic nasopharyngeal (+/-lung) respiratory swabs in sterile tubes of 2-3 ml of viral transport media for SARS-CoV-2 testing as needed  Carefully decontaminate morgue surfaces and outer body bag following autopsy  Ensure body is fully enclosed in a secure bag, tag as infectious and ensure funeral home is informed  Consider modifying release procedures to prevent bag being opened in morgue for identification  Perform hand hygiene after doffing PPE A C C E P T E D Genomic characterization and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding. 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