key: cord-0965679-vy23fkc7 authors: Benner, Sarah E; Patel, Eshan U; Laeyendecker, Oliver; Pekosz, Andrew; Littlefield, Kirsten; Eby, Yolanda; Fernandez, Reinaldo E; Miller, Jernelle; Kirby, Charles S; Keruly, Morgan; Klock, Ethan; Baker, Owen R; Schmidt, Haley A; Shrestha, Ruchee; Burgess, Imani; Bonny, Tania S; Clarke, William; Caturegli, Patrizio; Sullivan, David; Shoham, Shmuel; Quinn, Thomas C; Bloch, Evan M; Casadevall, Arturo; Tobian, Aaron A R; Redd, Andrew D title: SARS-CoV-2 Antibody Avidity Responses in COVID-19 Patients and Convalescent Plasma Donors date: 2020-09-10 journal: J Infect Dis DOI: 10.1093/infdis/jiaa581 sha: ef131fec6d13e941584f1328cd8d2a27d76198b9 doc_id: 965679 cord_uid: vy23fkc7 BACKGROUND: Convalescent plasma therapy is a leading treatment for conferring temporary immunity to COVID-19 susceptible individuals or for use as post-exposure prophylaxis. However, not all recovered patients develop adequate antibody titers for donation and the relationship between avidity and neutralizing titers is currently not well understood. METHODS: SARS-CoV-2 anti-spike and anti-nucleocapsid IgG titers and avidity were measured in a longitudinal cohort of COVID-19 hospitalized patients (n=16 individuals) and a cross-sectional sample of convalescent plasma donors (n=130). Epidemiologic correlates of avidity were examined in donors by linear regression. The association of avidity and a high neutralizing titer (NT) were also assessed in donors using modified Poisson regression. RESULTS: Antibody avidity increased over duration of infection and remained elevated. In convalescent plasma donors, higher levels of anti-spike avidity was associated with older age, male sex, and hospitalization. Higher NTs had a stronger positive correlation with anti-spike IgG avidity (spearman’s rho=0.386;p&0.001), than with anti-nucleocapsid IgG avidity (spearman’s rho=0.211;p=0.026). Increasing levels of anti-spike IgG avidity were associated with high NT(≥160) (adjusted prevalence ratio=1.58[95%CI=1.19-2.12]), independent of age, sex, and hospitalization. CONCLUSIONS: SARS-CoV-2 antibody avidity correlated with duration of infection and higher neutralizing titers, suggesting a potential alternative screening parameter for identifying optimal convalescent plasma donors. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the cause of coronavirus disease was declared a pandemic in early 2020 by the World Health Organization [1, 2] . As of September 1, 2020, there have been over 25 million confirmed COVID-19 cases and over 840,000 deaths [2, 3] . Symptoms of COVID-19 include cough, fever, fatigue, muscle pain and shortness of breath, with hospitalized patients at higher risk of death [2] [3] [4] . Currently, there remains no prophylactic vaccine for SARS-CoV-2 infection and pharmaceutical therapeutics are limited. Convalescent plasma therapy is presently the best option to confer temporary immediate passive immunity for infection prevention or early treatment of individuals [5] . Historically, passive immune therapy has been used as post-exposure prophylaxis or hospital treatment for a variety of viral infections [5] [6] [7] [8] [9] . Observational studies have evaluated the use of convalescent plasma to treat COVID-19, suggesting both safety and efficacy as reflected by shortened duration of hospitalizations and lower mortality (i.e. as compared to non-transfused controls) [6] [7] [8] [9] [10] [11] . Neutralizing antibodies in convalescent individuals are of main interest as they bind to various viral epitopes inhibiting infectivity by blocking attachment or entry into host cells [12] . The U.S. Food and Drug Administration (FDA) previously set a target neutralizing antibody titer of >1:320 for ideal convalescent plasma donors, but subsequently lowered the target titer [5, 13] . Additionally, 30% of recovered patients have low titers of SARS-CoV-2 specific neutralizing antibodies and >5% have undetectable levels [5, 14] . Determinants of SARS-CoV-2 neutralizing antibody responses are largely unknown. A c c e p t e d M a n u s c r i p t Of the four main structural SARS-CoV-2 proteins, spike (S1 subunit and receptor binding domain) and nucleocapsid proteins are the most immunogenic [15, 16] . In recent studies, potent antiviral receptor binding domain specific antibodies were found in all COVID-19 convalescent plasma donors despite low titers of neutralizing antibodies [17] . While the overall antibody titer is most likely an important factor in determining the viral neutralization potential of a given convalescent plasma donor, multiple other factors likely play a role. These include antibody binding avidity, diversity of response, and amounts of differing antibody classes. While antibody avidity, combined strength of the antibody-antigen complex, can have substantial impact on the humoral immune response, there are limited data on temporal dynamics and correlates of SARS-CoV-2 antibody avidity responses, and whether a stronger avidity response is associated with higher neutralizing titers. An association between antibody avidity and neutralizing antibody titer may also help to identify optimal convalescent plasma donors. The aim of this study was to characterize SARS-CoV-2 IgG antibody titers and avidity responses in acuteand convalescent patients, and compare their association with neutralizing antibody titers. All patients had confirmed SARS-CoV-2 infection via a positive RNA nasopharyngeal swab and a known date of symptom onset. Discarded blood serum samples were collected from specimens sent for clinical testing of patients over the duration of their inpatient stay. Samples were selected from individuals with multiple time points available after observed seroconversion. In total 16 distinct hospitalized patients at A c c e p t e d M a n u s c r i p t the Johns Hopkins Hospital contributed 84 serum samples with a median of 5 samples per patient (range:2-8; IQR:4.5-6.0). Recovered COVID-19 patients were contacted by study personnel to determine interest in donating convalescent plasma. All subjects had confirmed infection of SARS-CoV-2 determined by a positive RT-PCR of a nasopharyngeal swab. All potential donors had to be at least 18 years old and meet criteria for blood donation (i.e. never been diagnosed with HIV, not pregnant, etc.). Potential donors had 25 mL of whole blood collected. Blood was separated into plasma and peripheral blood mononuclear cells within 12 hours of collection, and plasma samples were aliquoted and stored at -80˚C. All donors provided informed written consent. Studies of both cohorts were approved by The Johns Hopkins University School of Medicine Institutional Review Board. Quantitation of neutralizing antibody titers against 100 fifty percent tissue culture infectious doses (TCID50) was performed using an microneutralization (NT) assay, as previously described [18, 19] . Endpoint NT titers were calculated as the highest serum dilution that eliminated cytopathic effect (CPE) A c c e p t e d M a n u s c r i p t in 50% of the wells (i.e., three of six replicate wells). NT area under the curve (AUC) values were estimated using the exact number of wells protected from infection at every plasma dilution; samples that had no NT activity were assigned a value of one-half of the lowest NT AUC. For analytic purposes in this study, NT AUC values ≥40 were considered to indicate moderate neutralization potency and NT AUC values ≥160 were considered to indicate high neutralization potency [13] . Euroimmun anti-SARS-CoV-2 IgG ELISA (Mountain Lakes, NJ) for the S1 domain of spike protein and Avidity assays were performed for samples that had Euroimmun A.U. ratios ≥0.8 and EDI Odns ≥0.18 (i.e., indeterminates and seropositive specimens). Euroimmun anti-SARS-CoV-2 ELISA IgG kits and EDI Novel Coronavirus COVID-19 IgG ELISA kits were used with modified protocols for avidity testing [19] . Each reaction utilized the following components: 100 µl of diluted plasma (1:101 dilution for Euroimmun or 1:100 dilution for EDI per manufacturer's protocol), and 100 µl of undiluted positive, negative or calibrator controls. Plates containing reaction components were incubated either for 1 hour at 37˚C followed by 3 washes (Euroimmun) or 30 minutes at room temperature followed by 5 washes (EDI). 300 A c c e p t e d M a n u s c r i p t µl of urea diluted in the appropriate wash buffer at varying concentrations (0, 1, 2, 4, 6 and 8M) were added to the plates and incubated at 37˚C for 10 minutes [20] . Plates were washed 3 or 5 times followed by manufacturer's protocol for addition of conjugate and substrate. Ratios of sample with urea concentration to sample without urea (either A.U. or Odns) were used to calculate dissociation constant (DC 50 ). The DC 50 was the concentration of urea where 50% of the signal was lost (Supplemental Figure 1 ). In samples where 50% of the signal was not lost by 8M urea solution, samples DC 50 were truncated at 8. DC 50 calculations were performed using AAT Bioquest IC50 calculator using four parameter logistic regression model [21] . Descriptive statistics were used to characterize both study populations: the longitudinal cohort of hospitalized COVID-19 patients and the cross-sectional sample of COVID-19 convalescent plasma donors. Percentages were calculated for categorical variables and continuous variables were described with medians and corresponding interquartile ranges (IQR). The primary study outcomes included antispike IgG avidity and anti-nucleocapsid IgG avidity as measured by the Euroimmun and EDI assays, respectively. Longitudinal trajectories in IgG titers and avidity outcomes were visualized by spaghetti plots and examined descriptively by time since symptom onset in the cohort of hospitalized COVID-19 patients. The remaining statistical analyses were conducted among the sample of convalescent plasma donors. The distribution of anti-spike IgG avidity and anti-nucleocapsid IgG avidity was examined by epidemiologic characteristics, including sex, age, race/ethnicity, and hospitalization status (i.e., COVID-19 illness severity). Differences between groups were calculated by Wilcoxon rank-sum tests or Kruskal-A c c e p t e d M a n u s c r i p t Wallis tests, as appropriate. Correlations between age and avidity were assessed by Pearson's correlation coefficient. Ordinary least-squares linear regression was used to examine the association of age, sex, and hospitalization status with avidity DC 50 values. Multivariable models included age, sex, and hospitalization status regardless of statistical significance, as they have previously been shown to be important for other IgG antibody responses in this study population [19] . The multivariable analysis also included adjustment for time since symptom onset. Subgroup analyses were performed stratified by sex using similar methodology. The primary analysis included avidity DC 50 values for individuals who were considered 'indeterminate' for a given IgG ELISA based off the manufacturer's cut-off. Thus, sensitivity analyses were performed that excluded donors who had an indeterminate sample. As a secondary analysis, evaluations of whether anti-spike IgG titers and avidity as well as antinucleocapsid IgG titers and avidity correlated with NT AUC values. Data were visualized with nonparametric locally weighted scatterplot smoothing (lowess) curves and correlations were assessed with Spearman rank correlation coefficients. To determine whether IgG titers and avidity are associated with elevated neutralizing antibodies, modified Poisson regression with robust variance were used to estimate prevalence ratios (PR) and corresponding 95% confidence intervals (CI) of an NT AUC value 160. Multivariable analyses were performed including the serologic biomarker of interest, age, sex, hospitalization status and time since symptom onset. This analysis was also repeated using an NT AUC value 40 as the outcome of interest. Sensitivity analyses were also performed including days since initial positive PCR+ diagnosis in multivariable models as opposed to self-reported days symptom onset; time since initial positive PCR+ diagnosis, which was confirmed with medical documentation, may be a more reliable indicator of duration of infection than a self-reported measure. A c c e p t e d M a n u s c r i p t There were 16 hospitalized COVID-19 patients in the longitudinal cohort who contributed an average of five samples per person (n=84 total samples). Plasma samples were collected from patients at a median of 13 days (range:4-35; IQR:10-16) after symptom onset( Table 1) . Using the manufacturer's cut-offs, 76% (n=64) of the samples were considered seropositive for anti-spike IgG by the Euroimmun assay and 89% (n=75) were considered seropositive for anti-nucleocapsid IgG using the EDI assay. Of note, 19 (23%) samples were seronegative for anti-spike IgG and 7(8%) samples were seronegative for antinucleocapsid IgG. However, all specimens collected after 14 days since symptom onset were considered to be seropositive by the Euroimmun assay and the EDI assay (Supplemental Table 1 ). IgG avidity was measured in seropositive and indeterminate specimens; anti-spike IgG avidity was measured in 65 samples (16 patients) and anti-nucleocapsid IgG avidity was measured in 76 samples (16 patients). There were 130 participants in the cross-sectional sample of convalescent plasma donors; the median age was 42(IQR:29-55), 46%(n=60) were female, and 75%(n=98) were non-Hispanic white( Table 1) . Plasma samples were collected from donors a median of 49 days(IQR: 43-55) after symptom onset. Only 11(8%) donors were previously hospitalized during the course of their infection, though two donors were missing data on hospitalization status. Using the manufacturer's cut-offs, 90%(n=117) of donors were considered seropositive for anti-spike IgG by the Euroimmun assay, while 81%(n=105) of donors were considered seropositive for anti-nucleocapsid IgG using the EDI assay. There were some samples that were considered indeterminate for anti-spike IgG serostatus (5% [n=7]) and anti-nucleocapsid IgG serostatus (7% [n=9]); plasma from four donors were indeterminate by both assays. A greater proportion of donors were seronegative for anti-nucleocapsid IgG (12%[n=16]) than for anti-spike IgG M a n u s c r i p t (4%[n=5]). Characteristics of donors were similar by sex; however, males were more likely than females to be non-Hispanic Asian(17% vs. 3%) and seropositive for anti-spike IgG(96% vs. 83%). Prevalence of a high neutralizing titer AUC value greater than 160 was 25%(32/126) overall, 21%(12/58) in females, and 29%(20/68) in males. Longitudinal trajectories in SARS-CoV-2 IgG titers and avidity responses were examined by time since symptom onset among the cohort of hospitalized COVID-19 patients (Figure 1) . Anti-spike IgG titers increased over days post symptom onset and appeared to peak around day 21 before beginning to plateau( Figure 1A) . This same trend was observed with anti-spike IgG avidity (Figure 1B) . Similarly, antinucleocapsid IgG titers increased with duration of illness, but appeared to peak earlier than anti-spike IgG (around day 15; Figure 1C ). However, anti-nucleocapsid IgG avidity followed the same trend as antispike IgG avidity and appeared to peak around day 21( Figure 1D ). The distribution of anti-spike IgG avidity was examined by sex, age, race/ethnicity, and hospitalization status among convalescent plasma donors (Figure 2) . The median avidity value was 4.12(IQR, 3.52-4.53) among females and 4.27(IQR, 3.85-4.68) among males ( p=0.084; Figure 2A) . Age was positively correlated with anti-spike IgG avidity among males (r=0.316;p=0.008) but not among females (r=0.022;p=0.872) (Figure 2B) . There was no significant difference in anti-spike IgG avidity by race/ethnicity (p=0.588; Figure 2C ). Donors who were hospitalized during the course of their infection had stronger anti-spike IgG avidity than donors who were not hospitalized (p<0.001; Figure 2D) . After A c c e p t e d M a n u s c r i p t adjustment for age, hospitalization, and time since symptom onset, males had on average greater antispike IgG avidity than females but this association was not statistically significant ( adjusted =0.248[95%CI, -0.014, 0.510]; Table 2 ). In multivariable analyses, hospitalization was a consistent predictor of stronger anti-spike IgG avidity overall, among females and males. In contrast, age was significantly associated with anti-spike IgG avidity among males (age per 10 years:  adjusted =0.150[95%CI, 0.032, 0.267]) but not among females ( adjusted =0.018[95%CI, -0.114, 0.150]). The distribution of anti-nucleocapsid IgG avidity was also examined by sex, age, race/ethnicity, and hospitalization status (Figure 3) , with similar findings as anti-spike IgG avidity, except sex did not modify the correlation between age and anti-nucleocapsid IgG avidity( Figure 3B) . In multivariable analysis, age was associated with anti-nucleocapsid IgG avidity in the overall model (age per 10 years: Table 2 ). In sensitivity analyses excluding indeterminate samples, effect estimates were slightly attenuated but inferences remained similar (Supplemental Tables 2 and 3) . Inferences were also similar for time since diagnosis when included in the multivariable models as opposed to time from symptom onset (Supplemental Tables 4 A c c e p t e d M a n u s c r i p t There was a strong positive correlation between anti-spike IgG titers and anti-spike IgG avidity (Spearman's rho=0.541;p<0.001); however, there was no significant correlation between antinucleocapsid IgG titers and anti-nucleocapsid IgG avidity (Spearman's rho=0.165;p=0.078) (Supplemental Figure 2) . Table 3) . These associations were also significant after adjustment for age, sex, hospitalization status, and time from symptom onset in multivariable analysis. Similar results were obtained when days since diagnosis was incorporated into the model rather than time from symptom onset(Supplemental Table 6 ). While there was a strong positive correlation between anti-nucleocapsid IgG titers and neutralizing antibody titer AUC values (Spearman's rho=0.685;p<0.001; Figure 4C ), the correlation between antinucleocapsid IgG avidity and neutralizing antibody titer AUC values was weak (Spearman's rho=0.211;p=0.026) and non-linear( Figure 4D) . Anti-nucleocapsid IgG titers were strongly associated with a higher prevalence of a neutralizing antibody titer AUC value 160 in univariable, as well as multivariable analysis( Table 3) . Anti-nucleocapsid IgG avidity did not have a statistically significant association with neutralizing antibody titer AUC value 160 (adjusted PR=1.57[95% CI: 0.40, 6.18]). Associations were attenuated when considering a neutralizing antibody titer AUC value 40 but remained in the same direction of association. A c c e p t e d M a n u s c r i p t DISCUSSION SARS-CoV-2 remains a critical health threat. Better understanding of antibody development is necessary. While antibody response is used to evaluate both the early and late stages of immune responses, the relationship between antibody titers and avidity has yet to be established in COVID-19 [22, 23] . Antibody avidity testing has been used to aid in diagnosis of recent infections, including EBV, [24] [25] [26] [27] . As some recovered patients do not develop high antibody titers following infection, not everyone is an ideal candidate for plasma donation and those who are may find it burdensome to return to the clinic following titer testing to donate plasma. Thus, based on these data that anti-spike IgG avidity is better correlated with neutralizing titers, testing antibody avidity has potential use as another screening parameter to identify optimal convalescent plasma donors. However, further research is needed to examine the potential benefit of this strategy. As was expected, antibody avidity and titers were low during initial infection, but increased as infection progressed. In previous SARS outbreaks, low antibody avidity was observed early in infection and increased within the first month of symptom onset [22, 23] . Additionally, high IgG avidity was observed three weeks following symptom onset in recovered COVID-19 individuals [28] . Consistent with those findings, anti-spike and anti-nucleocapsid IgG avidity increased with antibody titers within the first month of symptom onset and remained elevated following viral clearance. Of the two major A c c e p t e d M a n u s c r i p t immunogenic proteins, nucleocapsid proteins are more abundantly expressed, which could help to explain why titers for anti-nucleocapsid IgG appears earlier than anti-spike IgG [22, 29] . Avidity for both antibodies appears to peak around three weeks following symptom onset, which corresponds to previous reports of IgG seroconversion in COVID-19 patients occurring between 8-21 days following symptom onset [30, 31] . A frequent hallmark of COVID-19 is an increased disease severity and mortality among males compared to females [32] . Male bias has been documented in COVID-19 patients, with males having increased disease severity and mortality [33, 34] . Additionally, increased risk for severity of disease is associated with advancing age even though men and women both have same susceptibility risk [33, 35] . In the convalescent plasma cohort, antibody avidity was increased in older males compared to younger males. However, no statistically significant differences in anti-spike or anti-nucleocapsid avidity between males and females was observed, which may potentially be due to lack of power, particularly for antispike avidity. All participants donating convalescent plasma had recovered from COVID-19, and even though males tend to have a higher mortality rate than females, those parameters were not established in these studies. Avidity was significantly higher among hospitalized patients compared to those who were not hospitalized. Those hospitalized may have had higher viral loads and/or increased exposure, exacerbating symptoms, increasing immune response and antibody production to combat increased viral loads. Moreover, anti-spike avidity was correlated with higher neutralizing antibody titers. Neutralizing antibodies prevent viral replication by binding to viral proteins and blocking the interaction with cellular receptors or cell surface attachment to inhibit host membrane fusion [36] . There was a correlation between anti-nucleocapsid titers and neutralizing antibody titer AUC, but this may reflect the overall anti-SARS-CoV-2 antibody levels, as anti-nucleocapsid antibodies are not believed to have A c c e p t e d M a n u s c r i p t neutralizing activity. However, nucleocapsid antibodies may be necessary for viral clearance via antibody-dependent cellular cytotoxicity, antibody-dependent cell-mediated phagocytosis and/or complement activation [33, 35] . Asymptomatic individuals have lower antibody titers as compared to symptomatic patients and those individuals who recover from COVID-19 without becoming hospitalized typically do not have high neutralizing antibody activity [36] . In these studies, persons infected with SARS-CoV-2 who were symptomatic but not hospitalized had lower antibody avidity and 4-12% had no detectable antibody titers. Those with low titers and avidity may have either robust innate immune or adaptive T cell responses or strongly-binding antibodies early during exposure that results in viral clearance, and it will be important to examine these additional aspects of the anti-COVID immune response moving forward. The mechanisms behind why some individuals do not reach detectable antibody titers following viral clearance needs further investigation. This study had limitations. Antibody titers were analyzed using two different methods, and although increasing values of A.U. and/or ODn may indicate increase in antibody titers, these values are proxies for quantitative measures. Plateaus observed in both assays may be due, in part, to small dynamic range of the assay, and as a result antibodies do not appear to continue to rise. Only hospitalized patients were assessed in the longitudinal study and the antibody titers or avidity findings may not be generalizable to those who have mild or subclinical disease. Longitudinal samples did not have demographic characteristics collected, so avidity cannot be attributed to gender or age differences in that cohort. In the convalescent plasma donors, less than 10% were hospitalized and only one time point was collected per individual. Additionally, the usage of modified ELISA avidity assays have not been approved by the FDA for convalescent plasma qualification. However, alternative antibody assays are under evaluation for A c c e p t e d M a n u s c r i p t convalescent plasma testing [37] . Although this study did not analyze longitudinal convalescent plasma, it should be further investigated as reports of declining antibody titers are observed 2-3 months following infection [38] . This would help to identify the optimal window of plasma donation. Furthermore, future studies should explore convalescent plasma in relation to ABO blood groups [39, 40] . The use of avidity in conjunction with other serological testing may be useful in establishing parameters for optimal convalescent plasma donor screening. Increase in avidity following viral clearance is a good indication that strong antibodies and/or neutralizing antibodies are still present. Those with higher anti-spike antibody avidity also have higher neutralizing titers and can aid in identification of those who establish robust adaptive immune response to infection. M a n u s c r i p t Note: Ordinary least-squares linear regression models were used to examine associations with anti-spike and anti-nucleocapsid IgG avidity DC 50 values. The multivariable regression models included all other covariates shown. Separate models were constructed for each outcome and subgroup analyses were performed stratified by sex. A c c e p t e d M a n u s c r i p t A novel coronavirus from patients with pneumonia in China Available at Coronavirus Disease 2019 (COVID-19) | CDC. 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