key: cord-0914745-x1a3cqfs authors: Hurford, Amy; Rahman, Proton; Loredo-Osti, J. Concepción title: Modelling the impact of travel restrictions on COVID-19 cases in Newfoundland and Labrador date: 2021-06-16 journal: Royal Society open science DOI: 10.1098/rsos.202266 sha: 3e404190a7caf048825f5cd2049bfb0404314de8 doc_id: 914745 cord_uid: x1a3cqfs In many jurisdictions, public health authorities have implemented travel restrictions to reduce coronavirus disease 2019 (COVID-19) spread. Policies that restrict travel within countries have been implemented, but the impact of these restrictions is not well known. On 4 May 2020, Newfoundland and Labrador (NL) implemented travel restrictions such that non-residents required exemptions to enter the province. We fit a stochastic epidemic model to data describing the number of active COVID-19 cases in NL from 14 March to 26 June. We predicted possible outbreaks over nine weeks, with and without the travel restrictions, and for contact rates 40–70% of pre-pandemic levels. Our results suggest that the travel restrictions reduced the mean number of clinical COVID-19 cases in NL by 92%. Furthermore, without the travel restrictions there is a substantial risk of very large outbreaks. Using epidemic modelling, we show how the NL COVID-19 outbreak could have unfolded had the travel restrictions not been implemented. Both physical distancing and travel restrictions affect the local dynamics of the epidemic. Our modelling shows that the travel restrictions are a plausible reason for the few reported COVID-19 cases in NL after 4 May. In many jurisdictions, public health authorities have implemented travel restrictions to reduce coronavirus disease 2019 (COVID- 19) spread. Policies that restrict travel within countries have been implemented, but the impact of these restrictions is not well known. On 4 May 2020, Newfoundland and Labrador (NL) implemented travel restrictions such that non-residents required exemptions to enter the province. We fit a stochastic epidemic model to data describing the number of active COVID-19 cases in NL from 14 March to 26 June. We predicted possible outbreaks over nine weeks, with and without the travel restrictions, and for contact rates 40-70% of prepandemic levels. Our results suggest that the travel restrictions reduced the mean number of clinical COVID-19 cases in NL by 92%. Furthermore, without the travel restrictions there is a substantial risk of very large outbreaks. Using epidemic modelling, we show how the NL COVID-19 outbreak could have unfolded had the travel restrictions not been implemented. Both physical distancing and travel restrictions affect the local dynamics of the epidemic. Our modelling shows that the travel restrictions are a plausible reason for the few reported COVID-19 cases in NL after 4 May. In response to the COVID-19 pandemic, travel restrictions have frequently been implemented [1] , yet the efficacy of these restrictions has not been established. Some previous studies consider the impact of international travel restrictions [2] [3] [4] [5] , but there is a paucity of studies considering restricted travel within a nation [4] making the implementation of travel restrictions controversial for public health authorities [1] . Furthermore, the impact of travel restrictions on reducing COVID-19 spread is interwoven with the impacts of other public health measures. For example, the spread of imported cases depends on compliance with self-isolation directives for travellers, local physical distancing and mask wearing. Travel restrictions were implemented in Newfoundland and Labrador (NL) on 4 May 2020, such that only NL residents and exempted individuals were permitted to enter the province. We use a mathematical model to consider a 'what-if' scenario: specifically, 'what if there were no travel restrictions?', and in doing so, we quantify the impact that the travel restrictions had on the number of subsequent COVID-19 cases in NL. Mathematical models appropriate for large populations will poorly predict the epidemic dynamics of smaller populations since chance events may dramatically alter an epidemic trajectory when there are only a few cases to begin with [6] . As such, it is not clear that results describing the impacts of international travel restrictions will also apply within countries, to smaller regions, and to regions with low infection prevalence. Imported infections due to the arrival of infected travellers will have a disproportionately large effect when the number of local cases is few [5] . To appropriately characterize the impact of the travel restrictions on the COVID-19 outbreak in NL, we use a stochastic mathematical model appropriate for modelling infection dynamics in small populations [6] , and where a similar modelling approach has been used in other jurisdictions [7, 8] . Our analysis quantifies the impact of travel restrictions by considering a higher rate of imported infections when there are no travel restrictions, and we use the model to predict the number of cases that could have occurred in NL in the nine weeks subsequent to 4 May 2020. Our model is based on Plank et al. [7] who use a stochastic branching process to model COVID-19 dynamics in New Zealand. Our model describes the epidemiological dynamics of COVID-19 such that NL residents are susceptible to, infected with or recovered from COVID-19. Infected individuals are further divided into symptomatic and asymptomatic infections (infectious, no symptoms for the entire infectious period), and individuals with symptomatic infections may be in either the pre-clinical stage (infectious, prior to the onset of symptoms), or the clinical stage (infectious and symptomatic). The categorization of individuals into these infection classes is consistent with previous work [8, 9] . Our model assumes that COVID-19 infections may spread when an infectious person contacts a susceptible person. Contact rates when physical distancing is undertaken in response to the pandemic are expressed in relative terms, as percentages of the contact rate relative to pre-pandemic levels. We assume that the pre-pandemic contact rate was equivalent to a basic reproduction number of R 0 = 2.4, where the definition of R 0 for our model is explained in table 1. Our model assumes that infected travellers that fail to self-isolate enter the population and may infect susceptible NL residents, and the rate of contact between residents and travellers is assumed to be the same as between residents. For individuals that are infectious (those with asymptomatic, pre-clinical and clinical infections), the probability of infection given a contact depends on the number of days since the date of infection [14] , and infectivity further depends on whether the infection is pre-clinical, clinical or asymptomatic [9] . Individuals with clinical infections are relatively less infectious because these individuals are symptomatic and are more likely to self-isolate. Similar to models developed by other researchers, our model is formulated as a continuous time branching process [7, 8, 16] . A branching process is a type of stochastic model where on any given simulation run, the predicted epidemic may be different since the epidemiological events, and the timing of these events, take values drawn from probability distributions. For example, our model assumes that the number of new infections generated by an infectious person follows a conditional Poisson distribution with a mean that depends on physical distancing, the number of susceptible individuals in the population, the type of infection the infected individual has (asymptomatic, preclinical or clinical), and the number of days since the date of infection (see electronic supplementary material, equation S1). Most other aspects of our model, for example, the timing of new infections, are similarly stochastic, each described by probability distributions that have appropriate characteristics, and are fully described in the electronic supplementary material. An overview of the model and all parameter values are given in figure 1 π = 0.15 proportion of infections that are asymptomatic estimated as 17% in Byambasuren et al. [11] . Known to take a wide range of values [12, 13] . η S = 0.25 proportion reduction in infectivity for asymptomatic infections relative to clinical infections [9] c iso = 0.5 proportion reduction in infectivity for individuals with clinical infections due to self-isolation s ∼ Γ(6.1, 1.7) the time from date of infection to self-isolation (gamma-distributed) [7] . Note that s ≈ T 1 + T 2 , where T 1 and T 2 appear in [7] . the mean importation rate is reduced by 92% when travel restrictions are in place since z 1 = (1 − 0.92)z 2 . Therefore, the z 2 value is consistent with data reporting a 92.2% decrease in the number of passengers arriving at St. John's airport (NL) in June 2020 relative to June 2019 [15] . Equivalently, this assumption can be stated as that without travel restrictions the importation rate is 12.5 times greater (=0.1/0.008). royalsocietypublishing.org/journal/rsos R. Soc. Open Sci. 8: 202266 3 Our model does not consider age-structure or contact rates between individuals in the population that vary in space and time, due to, for example, attending school or work. This latter model limitation is discussed in the Discussion section. We intentionally limit the complexity of our model, since when additional parameters are added to a model the uncertainty in the predictions builds up, potentially to the point where the predictions may become useless [12] . The model is implemented in R and the code is publicly available at https://doi.org/10.6084/m9.figshare.12906710.v2. We assumed that the rate that infected individuals enter NL after 4 May and fail to self-isolate, is Poissondistributed with a mean, z 1 = 3 (no travel restrictions) and z 2 = 0.24 per month (with travel restrictions). The assumed mean rate with travel restrictions yields model predictions compatible with the reported number of cases of COVID-19 in NL after 4 May 2020 (figure 2). These parameter values, z 1 and z 2 , imply that with the travel restrictions the number of infected travellers arriving in NL and failing to self-isolate is reduced by 92%; or equivalently, without the travel restrictions the number of infected travellers arriving in NL and failing to self-isolate is 12.5 times greater. The mean rates that infected travellers enter NL and fail to self-isolate (z 1 and z 2 ) are compound parameters consisting of three components: (i) the rate that travellers enter NL, (ii) the proportion of travellers that are infected, and (iii) the proportion of infected travellers that fail to self-isolate. We do not resolve the individual contributions of these three components to z 1 and z 2 ; however, we note that only (i), the rate that travellers enter NL, probably changes when travel restrictions are in place. We assumed that infected travellers may be asymptomatic or pre-clinical, as symptomatic travellers are assumed to self-isolate. The proportion of infections that are asymptomatic is assumed to be the same for both travellers and NL residents. The mean rate that infected travellers enter NL is assumed to be constant over time and the origin cities of the travellers is not considered. From 14 March to 26 June 2020, the government of NL reported the number of active COVID-19 cases during media updates and on the [17] (for the relevant data, see also [18] ). A copy of the data that was used for our analysis is archived with our code [19] . In addition to the travel restrictions enacted on 4 May 2020, legislation and public health recommendations that would have affected both the importation rate of COVID-19 to NL, and the spread of infections in the community are summarized royalsocietypublishing.org/journal/rsos R. Soc. Open Sci. 8: 202266 in table 2. We assumed that the contact rate between NL residents changed after 18 March 2020, when a public health emergency was declared in NL. We assumed that prior to 18 March 2020, the pre-pandemic basic reproduction number was R 0 = 2.4, where the assumed value of R 0 affects how quickly the epidemic would grow. All model parameters except the contact rate from 19 March to 4 May 2020, c 1 , were estimated independently of the NL COVID-19 case data (table 1) . The contact rate, c 1 , is expressed as a percentage relative to the prepandemic contact rate (as implied by the pre-pandemic R 0 assuming all other contributors to R 0 are fixed). To fit c 1 given the data, we assumed that all clinical cases were reported, which is a reasonable assumption given the low number of cases reported in NL (for a model that considers unreported cases, see [23] ). We estimated c 1 by observing that c 1 = 30% resulted in an agreement of the model with the epidemic data (further details of the model calibration are provided in the electronic supplementary material). To determine the impact of travel restrictions, we characterize clinical infections occurring in NL after 4 May 2020 as: -Prior: the infected individual is part of an infection chain (i.e. a description of who infected whom) that originates from an NL resident infected prior to 4 May 2020. -Travel: the infected individual was infected prior to travelling to NL. -Local: the infected individual is an NL resident, who did not travel outside the province, and is part of an infection chain that originates from a traveller to NL. royalsocietypublishing.org/journal/rsos R. Soc. Open Sci. 8: 202266 The number of clinical cases that are 'travel-related' is calculated as the sum of infections characterized as 'travel' and 'local'. The predicted number of COVID-19 cases refers only to clinical infections, and does not include asymptomatic infections. The figure 3a) . Specifically, for a contact rate at 60% of its pre-pandemic level, the upper limit on the 95% prediction interval for the number of clinical cases over the nine weeks is 79 (without the travel restrictions) and 17 (with the travel restrictions; table 3 Our model predictions broadly agree with the data describing the number of active COVID-19 cases in NL reported from 14 March to 4 May 2020, and from 4 May to 26 June 2020 if contact rates are 60% or less relative to pre-pandemic levels (figure 2). Our modelling shows that implementing the travel restrictions on 4 May 2020 reduced the number of COVID-19 cases by 92% over the subsequent nine weeks (table 3) . Furthermore, without the travel restrictions, large outbreaks are much more likely (table 3, 95% prediction intervals; figure 3a ). Travel restrictions alone may be insufficient to limit COVID-19 spread since the level of physical distancing undertaken by the local community, which affects the contact rates between residents, is also a strong determinant of the outbreak size (figures 2-4). We found that the decrease in the mean number of clinical infections when the travel restrictions were enacted (a 92% reduction; table 3) was nearly exactly equal to the reduction in travel due to the travel restrictions (a 92% reduction; table 1). This equivalency was expected due to the hypothesized linear relationship between the importation rate and the mean outbreak size as noted in [24] . A consequence of this linear relationship is that any relative changes in the mean outbreak size are expected to be equal to the relative changes in the importation rate (with travel restrictions relative to without restrictions and vice versa). The assumptions and characteristics of our model that give rise to this linear relationship are discussed in table 4 along with examples of conditions where these assumptions would be violated. Related research, using North American airline passenger data from 1 January 2019 to 31 March 2020, in combination with epidemic modelling, found that depending on the type of travel restrictions, the effective reproduction number and the percentage of travellers quarantined, it would take between 37 and 128 days for 0.1% of the NL population to have been infected (table 2 in [25] ). These predicted epidemic trajectories are consistent with our results. However, unlike [25] , we have modelled importations and the NL epidemic dynamics as a stochastic process due to the low infection prevalence in NL at the time of our study. Our model does not consider spatial structure such that individuals contact each other in schools, workplaces or 'bubbles'. The absence of spatial structure in our model may over-estimate the probability of an epidemic establishing and the total number of cases until the outbreak subsides [26] . Related research, however, does consider spatially structured interactions in workplaces, businesses and schools, and concludes that without the travel restrictions implemented in NL on 4 May 2020 the number of COVID-19 cases would have been 10 times greater [27] , which is in close agreement with our results that the number of cases would have been 12.5 times greater (table 3) : a result that arises due to our parametrization of the importation rate without travel restrictions as 12.5 times greater than with travel restrictions (tables 1 and 4) . Travel restrictions are one of several approaches available We were not able to estimate the rate that infected travellers enter NL; however, other research modelling infection dynamics in the origin cities of air travellers to NL found that without travel restrictions a new COVID-19 case would enter NL every other day [25] . Similarly, we were not able to estimate the percentage of travellers to NL that comply with self-isolation directives. Smith et al. [28] found that 75% of survey participants reporting COVID-19 symptoms (high temperature and/or cough) also report having left their house in the last 24 h, violating the lockdown measures in place in the UK at the time, and so non-compliance rates may be quite high. Our analysis does not consider hospitalizations or deaths; however, we note that as of 4 May 2020, NL had experienced 259 clinical cases and three deaths. With the contact rate at 80% of its pre-pandemic level and no travel restrictions, we estimate that it would take, on average, 10.2 weeks for a further 259 clinical cases to occur, and although there is evidence that case fatality rates have changed over time [29] , it is reasonable to expect a further three deaths under these conditions. By contrast, with the travel restrictions in place, it would take more than six months (28.1 weeks) for this same number of cases and deaths to accumulate. Thus, with the first COVID-19 vaccines available to the public a year after the beginning of the pandemic, the value of enacting travel restrictions to delay the local outbreak by six months is potentially substantial. royalsocietypublishing.org/journal/rsos R. Soc. Open Sci. 8: 202266 Table 4 . A list of the assumptions and characteristics of our model that give rise to the linear relationship between the importation rate and the mean outbreak size. The linear relationship is that I tot = λ v I 1 , where I tot is the mean total number of cases, λ v is the importation rate, and I 1 is the mean number of cases that arise from one importation. model assumption example where the model assumption is violated effect of violating the assumption on outbreak size Mixing between individuals in the population is homogeneous. A group of travellers, all of whom are infected, fail to self-isolate, but also travel everywhere together and contact all of the same people. No matter what the size of the group, the resulting outbreak will be of similar size since the contacts of group members are redundant. Here, the mean outbreak size is not linearly related to the importation rate because a larger group would correspond to a larger number of importations, yet the resulting outbreak would not be much larger. Homogeneous mixing means than an infected person is equally likely to contact every susceptible person in the population. Mixing is non-homogeneous because group members are constrained to have contacts only among the same individuals as the other group members, and not all individuals in the population. The number of susceptible people is relatively unchanged during the timeframe of interest. The susceptible population is small, or infection control measures are few. Infected individuals that arrive later will generate smaller infection chains due to fewer susceptible people to infect. Therefore, the total outbreak size cannot be calculated by summing the size of the outbreaks per importation, since the timing of the importation affects the outbreak size due to that importation. The number of people an infected person contacts is unchanged during the timeframe of interest. Waning compliance with public health measures; school re-openings. As above, outbreak sizes per importation cannot be added to determine the total outbreak size because the timing of the importations affects the value of the outbreak size per importation. Infectivity does not change over time. . High infection prevalence in the absence of importations. The relationship between travel-related cases and the importation rate will be linear, but total infections are the sum of prior cases and travel-related cases, such that the linear relationship will not hold. The quantity of interest is the mean outbreak size. The quantity of interest is the median or a different quantile. The linear relationship with the importation rate applies only to the mean outbreak size. As can be observed in At the time of the implementation of the travel restrictions, there were few COVID-19 infections in NL. Without the travel restrictions, most of the subsequent COVID-19 infections would have been initiated by infected travellers who failed to comply with self-isolation requirements and only the actions of NL residents (i.e. physical distancing), and local health authorities (i.e. testing and contact tracing) would be sufficient to slow the exponential growth of these infection chains in the local community. Data accessibility. All data and code are archived in figshare: https://doi.org/10.6084/m9.figshare.12906710.v2. 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This manuscript arises from a technical report that was prepared at the request of the Department of Justice and Public Safety, NL. This study was not influenced by any representatives of the province of NL.