key: cord-0900489-hypqpqs0 authors: Sigal, Luis J. title: Activation of CD8 T Lymphocytes during Viral Infections date: 2016-05-09 journal: Encyclopedia of Immunobiology DOI: 10.1016/b978-0-12-374279-7.14009-3 sha: a737ecf46d007e0ce94b69b3a50a2f65d49c33a1 doc_id: 900489 cord_uid: hypqpqs0 CD8 T lymphocytes are a major cell population of the adaptive immune system. A fundamental characteristic of the CD8 T lymphocyte pool is that it is composed of millions of clones; each with a unique T cell receptor capable of recognizing a limited number of peptides displayed at the cell surface bound to the grooves of major histocompatibility complex class I (MHC I) molecules. Naïve CD8 T lymphocytes are normally resting and circulate between the blood and secondary lymphoid organs in search of their cognate peptide–MHC complexes. During viral infections, bone marrow–derived professional antigen-presenting cells (pAPCs) in secondary lymphoid organs display viral peptides on their MHC I molecules. Specific CD8 T lymphocytes that recognize these peptide–MHC adducts become activated (primed), proliferate extensively, and develop into effectors capable of killing infected cells, identified by the presence at their surface of the pertinent viral peptide–MHC complexes. This article describes how the process of priming naïve CD8 T lymphocytes occurs. During viral infections, cells of the adaptive immune system become activated when they recognize antigens through their antigen-specific receptors. The B cell receptor (BCR) is a membrane immunoglobulin that binds to the antigen directly. For T cells, however, the process is more complex because the T cell receptor (TCR) only recognizes antigens as small peptides bound to major histocompatibility complex (MHC) molecules at the surface of antigen-presenting cells. While the basic principles of antigen recognition by CD4 and CD8 T cells are similar, there are also major differences. This article focuses on the activation of CD8 T cells. Effector CD8 T lymphocytes kill virus-infected cells and produce antiviral cytokines such as interferon gamma. In this way, CD8 T lymphocytes contribute to resisting primary and secondary viral infections. For example, CD8 T lymphocytes have been shown to be essential for the efficient control of several viral infections of mice and humans including influenza virus, poxviruses, coronavirus, and herpes viruses (Lau et al., 1994; Karupiah et al., 1996; Welsh et al., 2004; Fang and Sigal, 2005; Xu et al., 2007; Doom and Hill, 2008; Channappanavar et al., 2014; Terrazzini and Kern, 2014) . Once an infection is cleared, most effector CD8 T cells die but many of them remain in the circulation and tissues as resting memory cells. These memory cells can help control secondary infections more rapidly (Welsh et al., 2004) . The activation of CD8 T lymphocytes requires an antigenspecific signal through the TCR (Yanagi, 1991; Matis, 1990) , which recognizes viral peptides (Townsend et al., 1985 (Townsend et al., , 1986a Townsend and Bodmer, 1989) bound to a groove on MHC class I (MHC I) molecules (Bjorkman et al., 1987a,b) . The interaction of the TCR with peptide-MHC I is enhanced by the binding of the CD8 coreceptor on the T cell to a region of the MHC I molecule away from the peptide-binding groove (Gao et al., 2002) . In addition, optimal CD8 T lymphocyte priming may require other signals such as costimulation (signal 2) (Duttagupta et al., 2009; Welten et al., 2013) . Direct signals to CD8 T cells by proinflammatory soluble cytokines such as type I interferons and interleukin-12, known as signal 3, are also important for efficient CD8 T cell responses to viruses but their effect seems to be during their early proliferation rather than priming (Haring et al., 2006; Curtsinger and Mescher, 2010; Kim and Harty, 2014) . MHC I molecules are heterodimers composed of a polymorphic alpha (a) chain with three extracellular domains, one transmembrane domain, one cytosolic domain, and a monomorphic beta-2 microglobulin chain with a single extracellular domain whose role is to stabilize the a chain. The membrane-proximal a3 domain of the a chain interacts with the CD8 coreceptor, while the membrane-distal a1 and a2 domains form a polymorphic groove that binds a diverse array of peptides, 8-10 amino acid long (Bjorkman et al., 1987a,b) , with a sequence motif that is characteristic for each a chain allele and determined by its polymorphic amino acids (Rammensee, 1995; Rammensee et al., 1993a,b; Grey et al., 1995) . The TCRs of CD8 T lymphocytes bind very loosely to most peptide-MHC I-peptide combinations but with much higher affinity to a small subset. This specificity is acquired during the development of the CD8 T lymphocyte in the thymus. In this process, the variable (V), diversity (D), and joining (J) segments of the TCR b and the V and J segments of the TCR a genes recombine randomly to generate unique complementarity-determining regions that bind with higher strength to particular peptide-MHC I adducts. This gives rise to millions of CD8 T lymphocyte clones, each with a distinctive peptide-MHC I specificity, that circulate between the blood and secondary lymphoid tissues in search of their cognate peptide-MHC I combinations (Gras et al., 2012; Godfrey et al., 2008) . Importantly, most CD8 T lymphocytes that randomly recognize self peptides are eliminated or rendered tolerant during T cell development. On the other hand, those that recognize nonself peptides, such as those derived from the degradation of viral proteins, become part of the activatable CD8 T lymphocyte pool (Klein et al., 2014; Parello and Huseby, 2015; Morris and Allen, 2012 ). During normal cellular housekeeping, the proteasome and other peptidases in the cytosol progressively degrade mature proteins and defective ribosomal products to their constitutive amino acids. The intermediate peptides generated in this process are very short-lived, if free in the cytosol. However, some of them are rapidly shuttled into the lumen of the endoplasmic reticulum (ER) by the transporter associated with antigen presentation. In the ER, the peptides can be further trimmed by ER aminopeptidase 1 and those with the appropriate motif bind to MHC I molecules that protect them from further degradation. After acquiring their peptide cargo, the MHC I molecules transit to the plasma membrane, where they display the peptides at the cell surface for CD8 T lymphocyte recognition. In this process, known as 'direct presentation' (DP), MHC I molecules present to CD8 T lymphocytes a sampling of the cellular proteome, which, in virus-infected cells, includes viral proteins (York and Rock, 1996; Cresswell et al., 2005; Rock and Shen, 2005; Rock et al., 2010) (Figure 1a ). Of note, DP is the only mechanism of MHC I antigen presentation available to most cells. Hence, for most cells, only direct viral infection triggers recognition and killing by antiviral CD8 T lymphocyte effectors (Rock et al., 2010) . Therefore, the quasiuniversal expression of MHC I allows effector CD8 T lymphocytes to kill almost every type of infected cells. Cross-presentation (CP) : Viral proteins are phagocytosed (here in cell debris such as apoptotic cells, but could also be in other forms such as viral particles). In the cytosolic pathway (1), the protein is transferred to the cytosol and then follows a pathway similar to DP (1a). Alternatively, TAP acquired from ER membranes can transport peptides back to the phagosome, where it is loaded to MHC I and transported to the cell surface ((1b), never demonstrated for viral infections). In the vacuolar pathway (2), the phagosome fuses with lysosomes. Lysosomal peptidases, mainly cathepsins, degrade the antigen and some of the resulting peptides are loaded into recycling MHC I molecules for transport to the cell surface. CP is active only in bone marrow-derived professional antigen-presenting cells and, in particular, in CD8a dendritic cells. Cytosolic CP is known to be important for the priming of CD8 T cells against herpes simplex 1 virus and to be operative for poliovirus, VACV, influenza A virus (IAV), and lymphocytic choriomeningitis virus. Vacuolar CP has been shown to play a role in CD8 responses to some peptides of IAV. Although effector CD8 þ T cells can recognize and kill every cell displaying their cognate peptide-MHC I combination, the initial activation (priming) of CD8 T lymphocytes generally requires antigen presentation by bone marrow-derived cells (BMDCs) (Lenz et al., 2000; Sigal et al., 1999; Sigal and Rock, 2000) . The importance of BMDCs in the priming of antiviral CD8 T lymphocyte responses was initially shown in the mouse for vaccinia virus (VACV), poliovirus (PV), influenza A virus (IAV), and most antigenic peptides of lymphocytic choriomeningitis virus (LCMV). Yet, for one peptide from LCMV, BMDC dependency could not be demonstrated (Sigal et al., 1999; Sigal and Rock, 2000; Lenz et al., 2000) . This may indicate that there might be exceptions to the need of professional antigen-presenting cells (pAPCs) for CD8 T lymphocyte activation. The BMDC responsible for the priming of CD8 T cells are called pAPCs. The ability of pAPCs to initiate CD8 T lymphocyte responses relies in their expression of high levels of MHC, costimulatory ligands and cytokines, and the capacity to migrate to the areas of secondary lymphoid organs where CD8 T lymphocyte responses are primed. Traditionally, dendritic cells (DCs), monocytes/macrophages, and B lymphocytes have been considered pAPCs. However, it has been shown that when recovered from secondary lymphoid tissues of mice infected with herpes simplex 1 (HSV-1), VACV, and IAV, the only pAPC that can prime CD8 T lymphocytes ex vivo are those DCs that express the CD8a molecule (Allan et al., 2003; Smith et al., 2003; Belz et al., 2004) . Moreover, mice deficient in the transcription factor Batf3, which lack CD8a DCs, do not generate CD8 T lymphocyte responses to HSV-1 or MCMV (Nopora et al., 2012) . Thus, there is current consensus that CD8a DCs are key pAPCs during viral infections. However, it remains to be formally demonstrated that these are the only pAPCs that prime CD8 T lymphocytes in vivo. In addition to DP, some pAPCs have the capacity to phagocytose dead or dying cells, processing some of their proteins, and presenting their peptides on their own MHC I molecules. This process is known as cross-presentation (CP) and allows pAPCs to cross-present viral antigens inside virus-infected cells (Shen and Rock, 2006; Gutierrez-Martinez et al., 2015; Cresswell et al., 2005) . Two major pathways of CP have been defined. In the cytosolic pathway, the exogenous proteins in vacuoles, such as endosomes and phagosomes, gain access to the cytosol, are processed by the proteasome, and are transferred to the ER or back to phagosomes to be loaded onto newly synthesized MHC I molecules. Alternatively, in the vacuolar pathway, access to the cytosol is not necessary and the peptides are generated in endosomes and phagolysosomes by proteases in the vacuoles (Shen and Rock, 2006) (Figure 1b) . The initial demonstration that cytosolic CP can be sufficient to prime an antiviral CD8 T lymphocyte response in vivo was done with PV in a situation where DP was not possible (Sigal et al., 1999) . However, the physiological role of CP in the normal priming of antiviral CD8 T lymphocytes remained hotly debated with some arguing that CP is essential and others considering it irrelevant (Melief, 2003; Heath et al., 2004; Wilson et al., 2006; Zinkernagel, 2002; Amigorena, 2003; Lizee et al., 2003) . In the middle ground, it appears that CP is important for some viral infections or viral antigens and not for others. For example, CP by CD8a DCs is necessary for an efficient CD8 T cell response to HSV-1 (Nopora et al., 2012; Wilson et al., 2006) . Also, vacuolar CP is partly responsible for the CD8 T cell response to IAV (Shen et al., 2004) . On the other hand, DP is sufficient for efficient priming of CD8 T cell responses to WT VACV, even though at least some of its antigens can be crosspresented (Larsson et al., 2001; Ramirez and Sigal, 2002; Serna et al., 2003; Xu et al., 2010) . Conversely, it has been reported that CP dominates the CD8 lymphocyte response to the replication-deficient strain of VACV-modified vaccinia Ankara (Gasteiger et al., 2007) . However, this finding has been challenged (Wong et al., 2013) . In addition to TCR ligation, optimal CD8 T lymphocyte responses require costimulation, which is also known as 'signal 2.' Most costimulatory molecules expressed by T cells belong to either the CD28 or the tumor necrosis factor receptor (TNFR) families. The CD28 family includes CD28, which binds CD80 and CD86 on pAPCs and ICOS which binds B7h on most cells. The TNFR family includes CD27, OX40, and 4-1BB, which respectively bind CD70, OX40-L, and 4-1BBL (Duttagupta et al., 2009; Welten et al., 2013) . For the priming of CD8 T cells, the most important costimulatory molecule is CD28, while the others play roles at other stages of the response such as expansion or maintenance (Duttagupta et al., 2009) . In contrast to the CD8 T cell responses to inert antigens, where absence of CD28 costimulation results in anergy, the CD8 T lymphocyte responses to virus in the absence of CD28 still occur, but their timing and strength may vary according to the specific pathogen. For example, absence of CD80 and CD86 results in reduced responses to vesicular stomatitis virus, murine gammaherpesvirus 68, and IAV, but the response to LCMV is normal (Duttagupta et al., 2009) . Of note, during VACV infection, the strength of the CD8 T lymphocyte response in CD28-deficient mice is normal, but the kinetics is delayed by one or two days. Yet, because VACV is only mildly pathogenic to mice, this delay is inconsequential to the health of the mice. On the other hand, when CD28deficient mice are infected with the related ectromelia virus, a poxvirus that is very pathogenic to mice, this delay in the CD28 response results in the death of the majority of CD28deficient mice (Fang and Sigal, 2006) . In contrast to CD8 T cells, CD4 T cells recognize antigens bound to MHC II molecules. For CD4 T cells, the major pAPCs are also DCs, but B cells that acquire antigen through the BCR also play a very important role. The process of antigen presentation on MHC II is quite different because the peptide is loaded in vesicular compartments and not in the ER. This requires a special mechanism to prevent the binding of peptides to MHC II in the ER (Blum et al., 2013) . In general, it is thought that CD4 T cells recognize viral antigens acquired by the pAPCs from the outside. Yet, endogenous viral proteins can also be presented on MHC II (Eisenlohr, 2013) . NKT cells are another type of T cells that recognize antigen as exogenous and endogenous glycolipids bound to the nonclassical MHC I molecule CD1d. The mechanisms of antigen loading on CD1d and the role of NKT cells in antiviral immunity are less well understood. Naïve CD8 T cells become activated when they recognize peptide antigen bound to MHC I at the surface of bone marrow-derived pAPCs. In contrast to other cells, pAPCs produce cytokines and express costimulatory molecules that are important for optimal CD8 T cell activation. For several viral infections, it has been shown that the key pAPCs are CD8a þ DCs. As most other cells, pAPCs can directly present antigen synthesized within the cell. Yet, pAPCs, and in particular CD8a þ DCs, can also acquire viral antigens from other infected cells and cross-present them with their own MHC I. While DP is more efficient, it is thought that CP is important for CD8 T cell responses to viruses that do not infect pAPCs or those that produce immune evasion molecules that target DP. Once activated by pAPCs, effector CD8 T cells can recognize any infected cell expressing MHC I loaded with its cognate peptide. This results in the killing of the infected cell and/or the production of antiviral cytokines both being important to control or clear viral infections. After the infection subsides, some antiviral CD8 T cells remain as memory cells, with their numbers being proportional to the strength of the initial response. These memory CD8 T cells can help control secondary infections, and their induction is a main goal of vaccination. Thus, understanding the process of CD8 T cell activation can help develop better vaccines. See also: Cytokines and Their Receptors: Epidermal viral immunity induced by CD8alpha þ dendritic cells but not by Langerhans cells Virus-specific T cells as correlate of (cross-)protective immunity against influenza Y in X priming Cutting edge: conventional CD8 alpha þ dendritic cells are generally involved in priming CTL immunity to viruses The foreign antigen binding site and T cell recognition regions of class I histocompatibility antigens Structure of the human class I histocompatibility antigen, HLA-A2 Pathways of antigen processing T cell-mediated immune response to respiratory coronaviruses Mechanisms of MHC class I-restricted antigen processing and cross-presentation Inflammatory cytokines as a third signal for T cell activation MHC class I immune evasion in MCMV infection Costimulation signals for memory CD8 þ T cells during viral infections Alternative generation of MHC class II-restricted epitopes: not so exceptional? Antibodies and CD8 þ T cells are complementary and essential for natural resistance to a highly lethal cytopathic virus Direct CD28 costimulation is required for CD8 þ T cellmediated resistance to an acute viral disease in a natural host Molecular coordination of alphabeta T-cell receptors and coreceptors CD8 and CD4 in their recognition of peptide-MHC ligands Crosspriming of cytotoxic T cells dictates antigen requisites for modified vaccinia virus Ankara vector vaccines The fidelity, occasional promiscuity, and versatility of T cell receptor recognition A structural voyage toward an understanding of the MHC-I-restricted immune response: lessons learned and much to be learned Class I MHC-peptide interactions: structural requirements and functional implications Cross-presentation of cellassociated antigens by MHC class I in dendritic cell subsets Inflaming the CD8 þ T cell response Crosspresentation, dendritic cell subsets, and the generation of immunity to cellular antigens Different roles for CD4 þ and CD8 þ T lymphocytes and macrophage subsets in the control of a generalized virus infection Impact of inflammatory cytokines on effector and memory CD8 þ T cells Positive and negative selection of the T cell repertoire: what thymocytes see (and don't see) Efficiency of cross presentation of vaccinia virusderived antigens by human dendritic cells Cytotoxic T-cell memory without antigen Requirements for bone marrow-derived antigen-presenting cells in priming cytotoxic T cell responses to intracellular pathogens Control of dendritic cell cross-presentation by the major histocompatibility complex class I cytoplasmic domain The molecular basis of T-cell specificity Mini-review: regulation of cytotoxic T lymphocyte responses by dendritic cells: peaceful coexistence of cross-priming and direct priming? How the TCR balances sensitivity and specificity for the recognition of self and pathogens MHC class I cross-presentation by dendritic cells counteracts viral immune evasion Indoctrinating T cells to attack pathogens through homeschooling Macrophages and dendritic cells use the cytosolic pathway to rapidly cross-present antigen from live, vaccinia-infected cells Chemistry of peptides associated with MHC class I and class II molecules MHC molecules as peptide receptors Peptides naturally presented by MHC class I molecules Proteases in MHC class I presentation and cross-presentation Cross-presentation: underlying mechanisms and role in immune surveillance Cutting edge: efficient MHC class I cross-presentation during early vaccinia infection requires the transfer of proteasomal intermediates between antigen donor and presenting cells Priming of T cells by exogenous antigen cross-presented on MHC class I molecules Important role of cathepsin S in generating peptides for TAP-independent MHC class I crosspresentation in vivo Cytotoxic T-cell immunity to virusinfected non-haematopoietic cells requires presentation of exogenous antigen Bone marrow-derived antigen-presenting cells are required for the generation of cytotoxic T lymphocyte responses to viruses and use transporter associated with antigen presentation (TAP)-dependent and -independent pathways of antigen presentation Cutting edge: conventional CD8 alpha þ dendritic cells are preferentially involved in CTL priming after footpad infection with herpes simplex virus-1 Cell-mediated immunity to human CMV infection: a brief overview Antigen recognition by class I-restricted T lymphocytes Cytotoxic T lymphocytes recognize influenza haemagglutinin that lacks a signal sequence The epitopes of influenza nucleoprotein recognized by cytotoxic T lymphocytes can be defined with short synthetic peptides Cytotoxic T cells recognize fragments of the influenza nucleoprotein Immunological memory to viral infections The distinct role of T cell costimulation in antiviral immunity Systemic activation of dendritic cells by Toll-like receptor ligands or malaria infection impairs cross-presentation and antiviral immunity Systemic Toll-like receptor ligation and selective killing of dendritic cell subsets fail to dissect priming pathways for antivaccinia virus CD8(þ) T cells Memory CD8 þ T cells are gatekeepers of the lymph node draining the site of viral infection Direct presentation is sufficient for an efficient anti-viral CD8 þ T cell response T-cell receptor and T-cell-resistant virus variants Antigen processing and presentation by the class I major histocompatibility complex On cross-priming of MHC class I-specific CTL: rule or exception? Acknowledgments I thank Ms Holly Gillin for assistance in the preparation of the manuscript. The work in the author's laboratory was supported by NIH grants R01AI065544, R01AI110457, and R01AG048602.