key: cord-0840915-tz1a2r60
authors: Abu-Humaidan, Anas H. A.; Ahmad, Fatima M.; Al-Binni, Maysaa' A.; Bani Hani, Amjad; Abu Abeeleh, Mahmoud
title: Characteristics of Adult Sepsis Patients in the Intensive Care Units in a Tertiary Hospital in Jordan: An Observational Study
date: 2021-12-30
journal: Crit Care Res Pract
DOI: 10.1155/2021/2741271
sha: a8346fa0dbf7b811079d2a557f34ba3fb4c761f1
doc_id: 840915
cord_uid: tz1a2r60

Sepsis is a global health issue that is commonly encountered in the intensive care unit (ICU) and is associated with high morbidity and mortality. Available data regarding sepsis in low- and middle-income countries (LMIC) is lacking compared to higher income countries, especially using updated sepsis definitions. The lack of recent data on sepsis in Jordan prompted us to investigate the burden of sepsis among Jordanian ICU patients. We conducted a prospective cohort study at Jordan University Hospital, a tertiary teaching hospital in the capital, Amman. All adult patients admitted to the adult ICUs between June 2020 and January 2021 were included in the study. Patients' clinical and demographic data, comorbidities, ICU length of stay (LOS), medical interventions, microbiological findings, and mortality rate were studied. Descriptive and inferential statistics were used to analyse data from patients with and without sepsis. We observed 194 ICU patients during the study period; 45 patients (23.3%) were diagnosed with sepsis using the Sepsis-3 criteria. Mortality rate and median ICU LOS in patients who had sepsis were significantly higher than those in other ICU patients (mortality rate, 57.8% vs. 6.0%, p value < 0.001, resp., and LOS 7 days vs. 4 days, p value < 0.001, resp.). Additionally, sepsis patients had a higher combined number of comorbidities (2.27 ± 1.51 vs. 1.27 ± 1.09, p value < 0.001). The use of mechanical ventilation, endotracheal intubation, and blood transfusions were all significantly more common among sepsis patients. A causative organism was isolated in 68.4% of sepsis patients with a prevalence of Gram-negative bacteria in 77.1% of cases. While the occurrence of sepsis in the ICU in Jordan is comparable to other regions in the world, the mortality rate of sepsis patients in the ICU remains high. Further studies from LMIC are required to reveal the true burden of sepsis globally.

Sepsis is commonly encountered in the intensive care unit (ICU). An audit of ICU patients across several continents identified nearly 30% of patients as having sepsis during their ICU stay [1] , with rates varying among studies and regions [2, 3] . Mortality rates associated with sepsis vary by region as well but are consistently high, especially in the elderly [4] . e aging population around the world led to the recognition of sepsis as an important cause of mortality [5] .

Studies discussing the rate and demographics of sepsis are often carried out in high-income countries [6, 7] ; such studies form the basis for patient management guidelines. More studies from low-and middle-income countries (LMIC) can shed light on the difficulties faced in sepsis management in resource challenged environments and would better reflect the true global burden of sepsis [8, 9] .

Sepsis is associated with several pathological and biochemical disturbances. Consequently, many definitions for sepsis have been put forth. e ird International Consensus Definition for Sepsis and Septic Shock (Sepsis-3) considered sepsis as life-threatening organ dysfunction caused by a dysregulated host response to infection [10] . Consistency in definition can offer a better interpretation of epidemiological studies and recognition of disease burden. In Jordan, there are no studies on the burden and characteristics of adult sepsis patients using the Sepsis-3 definition.

is prospective cohort study conducted over the period between July 2020 and January 2021 examined all adult patients admitted to the adult ICUs in a tertiary academic hospital in the Jordanian capital Amman to achieve two goals: first, to understand the burden of critical illness and sepsis by reporting on length of stay, comorbidities, medical interventions, and mortality rates of ICU patients; second, to assess the microbiological findings in sepsis patients.

is was a single-centre prospective cohort study conducted at the adult ICUs of Jordan University Hospital (JUH), Amman, the largest academic tertiary hospital in the capital. JUH serves over 500000 patients from various regions of the country in outpatient clinics each year. We followed up 194 patients admitted to JUH ICUs over a period of 6 months (from July 15, 2020, through January 15, 2021). Inclusion criteria included all patients who were ≥18 years of age admitted to JUH's adult ICUs within the study period. e only exclusion criterion was age under 18 years. e total bed capacity of JUH is about 600, with approximately 32 beds distributed to 3 adult ICUs: surgical (SICU), medical (MICU), and anesthesia (AICU) ICUs. In 2020, these ICUs experienced 635 admissions. e study population was classified into two groups, including patients having sepsis anytime during their ICU stay period and those who did not. e diagnosis of sepsis was based on the diagnostic guidelines of Sepsis-3 that were set in 2016 by the ird International Consensus Definitions for Sepsis and Septic Shock [10] . Sepsis was defined as a suspected or documented infection plus an acute organ dysfunction represented by an increase in Sequential Organ Failure Assessment (SOFA) score equal to or greater than 2 points [10, 11] . ICU mortality was defined as death during anytime of the ICU stay. ICU length of stay (LOS) was calculated as the date of ICU discharge−the date of ICU admission. Hospital LOS was calculated as the date of hospital discharge−the date of hospital admission.

e study protocol was approved by the Institutional Review Board (IRB) at JUH (Ref. no. 189/ 2020). In addition, the work was conducted according to the principles of Good Clinical Practice (GCP) that has its origin in the Declaration of Helsinki (64th World Medical Association General Assembly, Fortaleza, Brazil, October 2013). All collected data were treated with confidentiality.

Participation in the study was voluntary. Following a full explanation of the study objectives, a written and signed informed consent was obtained from all conscious patients who agreed to participate. Assessing the level of consciousness involved checking orientation: participants who were able to promptly and spontaneously state their name, location, and date or time were said to be conscious [12] . For patients who were unconscious or unable to consent at the time of admission, consent was obtained from first-degree relatives. However, consent was sought from those who survived once they regained consciousness or improved clinically to a stage where they can consent.

For each patient, the recorded data were categorised into demographic, clinical, and laboratory variables. Demographic variables included age, sex, height, weight, smoking status, comorbidities, date of admission to the hospital or ICU, and date of discharge from the hospital or ICU.

Clinical variables included ICU section (divided into SICU, MICU, and AICU), source of ICU admission (operation room, hospital wards, emergency department, etc.), reasons for admission, suspected origin of infection for patients with sepsis, vital signs on admission, and medical interventions (mechanical ventilation, catheterization, and blood transfusion).

Laboratory variables included haemoglobin, packed cell volume (PCV), total WBC count, neutrophil count, lymphocyte count, platelet count, creatinine, random blood sugar (RBS), and electrolytes (Na, K, and CL), as well as microbiological findings such as culture results and type of samples used for culture.

Data are presented as count or percentages or both for categorical variables, and as mean-± standard deviation with or without the median for continuous variables. To compare measurements of sepsis and nonsepsis groups, as well as survivors and nonsurvivors, the unpaired T test (UT), Fisher's exact test (FE), or Mann-Whitney U test (MW) was used when appropriate, and Shapiro-Wilk test was used to test the normality distribution of data. Data generated was organised in Microsoft Excel and statistical analysis was carried out using IBM Statistical Package for the Social Sciences (SPSS) version 25.0 (USA) and GraphPad prism 8 (USA).

We analysed the demographic and clinical data of 194 patients admitted to the adult ICUs at JUH during the study period. To observe factors associated with ICU survival, we divided the cohort into patients discharged alive from the ICU (survivors) and patients who died during their ICU stay (nonsurvivors). e average age in the cohort was 60 ± 16 years, with 107 (55.2%) males and 87 (44.8%) females ( Table 1 ). Most of the ICU patients had at least 1 comorbidity (76.8%). e most commonly encountered comorbidity was diabetes in 93 patients (47.9%). Nonsurvivors were significantly more likely to suffer from renal disease and chronic obstructive pulmonary disease (COPD) compared to survivors (48.6% vs. 14.5%, p < 0.001, and 20.0% vs. 5.0%, p � 0.008, resp.) (Table 1) . Moreover, hypertension was common in this cohort (57.2%) but was not significantly more common in All results are presented as count and percent (n (%)) for categorical variables and mean ± SD (median) for continuous variables. 1 Statistically significant values are shown in bold. 2 Total >100% since more than one comorbidity or reason for admission were considered for the same patient. Measurement unit: age: years, BMI: kg/m 2 . BMI: body mass index, CVD: cerebrovascular diseases, CTD: connective tissue disease, IHD: ischemic heart disease, and COPD: chronic obstructive pulmonary disease. (9) 13.0 ± 14.14 (9) 12.1 ± 12.27 (8) 0.288

All results are presented as count and percent (n (%)) for categorical variables and mean ± SD (median) for continuous variables. 1 Statistically significant values are shown in bold. ICU: intensive care unit, LOS: length of stay.

Critical Care Research and Practice nonsurvivors (Table 1) . Additionally, vital signs were recorded for all ICU patients on admission and can be found in Supplementary Table 1 .

When assessing factors related to ICU admission and stay, the majority of patients were found to have been admitted either through the emergency department (42.3%) or the surgical ward (39.2%), and the majority were serviced in the surgical ICU (63.9%). Patients admitted to the MICU formed a small part of the study cohort (14, 14.2%) but had the highest percentage of nonsurvivors (6, 42%) ( Table 2 ). e median ICU LOS was 4 days for the whole cohort. When compared to survivors, nonsurvivors had a longer LOS in the ICU (median 5 days vs. 4 days, p � 0.004) ( Table 2) . Notably, the main reason for admission for nonsurvivors was renal disease (34.3%), followed by sepsis (31.4%), both of which were more frequent causes of admission than in survivors (11.3%, 6.3%, resp., p � 0.002, p < 0.001, resp.) ( Table 2 ). e allcause mortality rate in the ICU was 18.0%.

A total of 45 patients (23.2%) in the study cohort were diagnosed by the attending clinicians as having sepsis during their ICU stay. Sepsis was identified on admission to the ICU in 42 patients (93.3%). When comparing the demographics of the sepsis and nonsepsis groups, sepsis patients tended to be older (66.53 ± 13.6 vs. 57.93 ± 16.5, p value � 0.002), while no significant differences were found in the gender of the patients, their BMI, or their smoking status (Table 3) . Among 11 recorded comorbidities in this study derived from the Charlson Comorbidity Index (CCI) [13] , sepsis patients had a higher combined number of comorbidities (2.27 ± 1.51 vs. 1.27 ± 1.09, p < 0.001). Furthermore, only 13.3% of patients with sepsis did not have any comorbidity compared to 26.2% of the nonsepsis group. Some comorbidities were significantly overrepresented in sepsis patients, and among those were renal disease (48.9% vs. 12.1%, p < 0.001), cerebrovascular diseases, heart failure, and chronic obstructive pulmonary disease (Table 3) . e principle source of admission for sepsis patients was the emergency department (46.7%), and this was followed by hospital wards (33.4%), highlighting the importance of hospital acquired sepsis. e majority of sepsis patients (80%) were managed in the surgical ICUs. Sepsis patients had a longer ICU LOS than nonsepsis patients (median 7 days vs. 4 days, p value < 0.001) and a longer hospital stay as well (median 11 days vs. 9 days, p � 0.044) ( Table 4) . All results are presented as count and percent (n (%)) for categorical variables and mean ± SD (median) for continuous variables. 1 Statistically significant values are shown in bold. 2 Total >100% since more than one comorbidity or reason for admission were considered for the same patient. Measurement unit: age: years, BMI: kg/m 2 . BMI: body mass index, CVD: cerebrovascular diseases, CTD: connective tissue disease, IHD: ischemic heart disease, and COPD: chronic obstructive pulmonary disease.

Importantly, the mortality rate was 57.8% in sepsis patients compared to only 6.0% in patients who did not have sepsis (p < 0.001) ( Table 4 ). e attending clinicians assigned a diagnosis of septic shock to 33 sepsis patients (77.3%) on the basis of profound circulatory abnormalities despite vasopressor therapy, although lactate levels were not available, and hence one of the Sepsis-3 criteria for septic shock could not be identified. Nevertheless, those patients had a cardiovascular SOFA score ≥3, indicating severe circulatory dysfunction that could explain the high mortality in the sepsis group.

Blood tests of ICU patients on admission were examined. Sepsis patients had higher total WBC count (15.91 ± 7.99 vs. 11.92 ± 5.13 10 9 /L, p � 0.001), higher neutrophil counts (8.59 ± 0.67 vs. 7.85 ± 1.29 10 9 /L, p < 0.001), and lower lymphocyte counts (0.87 ± 0.56 vs. 1.453 ± 1.03 10 9 /L, p < 0.001). Additionally, sepsis patients had higher creatinine (2.40 ± 2.16 vs. 0.89 ± 0.85 mg/dl, p < 0.001) and lower haemoglobin values (10.8 ± 2.32 vs. 11.79 ± 2.34 g/dL, p � 0.014) (Supplementary Table 2 ). As for vital signs recorded on admission, sepsis patients had higher temperature and blood pressure readings, while differences in heart rate and respiratory rate did not reach statistical significance (Supplementary Table 2 ).

To understand the burden of sepsis in the ICU in terms other than mortality and LOS, we assessed the use of various medical interventions in the sepsis and nonsepsis groups, namely, the use of respiratory support, blood products, and catheters (Table 5) .

Patients often had to use more than one respiratory support modality during their ICU stay. On average, each patient with sepsis used more respiratory assistance methods compared to patients who did not have sepsis (2.1 ± 1.49 vs. 1.4 ± 1.02, resp., p � 0.002). e use of invasive mechanical ventilation was significantly higher in patients with sepsis (57.8% vs. 8.7%, p < 0.001), as was the use of noninvasive mechanical ventilation in the form of CPAP and BiPAP (28.9% vs. 4.0%; p � 0.002). Similarly, the use of blood products, measured as a transfusion event of any blood product, was more common in patients with sepsis (60.0% vs. 36.9%; p � 0.009) ( Table 5) .

When investigating the use of arterial and venous catheters, central venous catheters were used more often in sepsis patients (51.1% vs. 26.8%; p � 0.003). However, we did not find significant differences in the use of chest tubes (13.3%, 8.7%; p � 0.393) or urinary catheters (84.4%, 89.9%; p � 0.420), while nasogastric tubes were found to be used less in sepsis patients (48.9%, 65.6%; p � 0.012) ( Table 5) .

Microbiological culture results were available for 39 sepsis patients; microbial growth was identified in 27 patients (69.2%) (designated as culture-positive sepsis), while the remaining 12 (30.8%) showed no growth in culture (designated as culture-negative sepsis). ere was no significant difference between culture-positive or culture-negative sepsis in ICU mortality (55.5% vs. 58.3%, resp., p � 0.758) or median ICU LOS (7 days vs. 5.5 days, p � 0.192). e suspected origin of infection was designated by the attending clinician as gastrointestinal in the majority of patients (37.8%), followed by the genitourinary tract (24.4%), and the respiratory tract (24.4%) ( Table 6) .

Among the isolated organisms, we found a predominance of Gram-negative bacteria in 77.1% of all samples that showed any growth, with Escherichia coli and Acinetobacter baumani each found in 20.8% of the samples (Table 6 ). While coagulase negative staphylococci were the most commonly isolated Gram-positive species and were found in 20.8% of samples (Table 6) .

We also noted the type of sample ordered for culture (e.g., blood, urine, skin swabs, and body fluid) and the rate of positive growth in each type (Table 6 ). More than one sample were obtained for the majority of patients and were sent for culture with a total of 135 samples. e most ordered sample for culture was blood with 64 samples, 28.1% of which were positive, while the samples that most frequently returned positive microbial growth were soft tissue and skin samples (75%) ( Table 6 ).

is study defined sepsis as life-threatening organ dysfunction associated with infection as proposed by Sepsis-3 [10] . We found no data on sepsis epidemiology among the adult population in Jordan using the aforementioned definition. e definition of sepsis matters in the prognostication of patients since those labeled as having sepsis are expected to have a difficult clinical course and poor outcome compared to those without sepsis, which effectively alters management and resource allocation in the ICU. In general, we found that the Sepsis-3 definition managed to categorise a set of patients who have higher mortality, longer LOS, and more comorbidities and required more frequent medical intervention than nonsepsis patients.

We found that the all-cause ICU mortality rate was 18.0%, which is lower than the mortality rate of 34.6% reported by a retrospective multicentre study conducted in Jordan from 2014 to 2017 [14] . e study noted that university hospitals such as the one in which we conducted this study had lower mortality rates.

is supports previous studies showing that ICU specific factors (e.g., organization, staff, and equipment) have a more considerable influence on the patient outcome than regional factors (e.g., ICUs within the same city or country) [15] . On the other hand, the average ICU LOS of around 6 days was concordant with previous reports from Jordan and regionally [1] .

We found that 23.2% of patients had sepsis during their ICU stay, which is slightly under the global average of around 29.5% [1] . While all test results required to label a patient as having sepsis according to Sepsis-3 were available (e.g., creatinine, bilirubin), patients' lab profiles lacked a point of care test for lactate. Hence, we could not identify an exact subset of septic shock patients according to Sepsis-3. Sepsisinduced hypotension persisting despite adequate fluid resuscitation diagnosed/identified by clinicians as septic shock Critical Care Research and Practice 5

was found in 33 of the 45 sepsis patients. is could explain the high mortality rate at 57.8%, a figure around ten times that of nonsepsis patients in this study, and around two times that of sepsis patients in global estimates [1] . Additionally, sepsis patients had a longer median LOS (7 days) compared to patients who did not have sepsis during their ICU stay (4 days), emphasising the prolonged burden among sepsis patients in ICUs. Indeed, this analysis showed that sepsis patients strained ICU resources since they underwent endotracheal intubation and mechanical ventilation, which has been reported to contribute the most to the daily cost of ICU patients [16] , almost 5 times that of the nonseptic patients. Moreover, the increased LOS combined with more frequent use of medical equipment in sepsis patients would eventually lead to increased hospital costs and extended stays in the ICU, in concurrence with other reports [6, 17, 18] . is should be taken into consideration when managing limited ICU resources, especially in surge situations such as the current COVID-19 pandemic.

Patients in the ICU often suffer from diseases other than that for which they were admitted to the ICU; hence, we aimed to identify comorbid conditions associated with sepsis. Increased numbers of comorbid conditions have been shown to increase ICU mortality [19, 20] . In this cohort, the combined number of comorbidities was higher in sepsis compared to nonsepsis patients (2.3 ± 1.5 vs. 1.27 ± 1.09, [21, 22] , and the devastating multisystem effects of DM [23] . e comorbidity that stands out in the sepsis and nonsurvivors' groups was renal disease, which included acute and chronic kidney diseases. Renal diseases were previously shown to be associated with increased organ failure and ICU mortality [24, 25] . When investigating the microbiological results of sepsis patients, causative microorganisms were not isolated in 30.8% of the patients. Notably, the Extended Prevalence of Infection in Intensive Care (EPIC) II study found that 30% of all infections in ICUs worldwide were culture negative [26] . Yet contrary to several reports of increased mortality and LOS in culture-positive sepsis [27, 28] , we did not find any significant difference in ICU mortality or LOS with regard to culture positivity. Several factors could have contributed to this result, including sample size, low yield of microorganisms due to prior antibiotic treatment, sample transportation, and the presence of slow-growing and fastidious microorganisms [29, 30] .

Some limitations and strengths of this study need to be addressed. First, the ICUs in which we conducted this study are not representative of all ICUs in Jordan, since academic hospitals often provide clinical capabilities unavailable in nonacademic hospitals [14, 31] . Another limitation is the sample size; we were not able to achieve the desired sample size due to changes in the ICUs' structure (done in order to accommodate COVID-19 patients) which eventually led to termination of the study. Nevertheless, this study provided a reference point for future studies in Jordan that will further characterise sepsis patients. Finally, we believe that the prospective data collection performed by the research team on a daily basis provided more accurate, complete, and consistent data when compared to retrieving data from patients' medical records.

In conclusion, this study helped clarify the burden of sepsis in a tertiary academic hospital ICU setting, in a LMIC using updated sepsis definitions. e burden of sepsis in Jordan is high as illustrated by the high mortality, increased LOS, and more frequent use of medical interventions for sepsis patients. e creation of a national sepsis registry in Jordan could guide future ICU policies and would increase awareness of recent sepsis definitions among ICU staff, which should eventually improve patient management. Further studies are needed to assess the burden of sepsis in the ICU in LMIC, and this data could influence international sepsis management guidelines and would guide the decision makers in the allocation of limited equipment and staff to the ICU.

All the data analysed during this study are included in this published article.

e authors declare no competing interests.

6: Microbiological findings in sepsis patients

8%) Pseudomonas aeruginosa, 3 (6.3%) Others, 5 (10.4%) Fungi, 10 (20.8%) Candida species, 10 (20.8%) Sample type, n (% positive culture growth) Blood, 64 (28.1%) Urine, 38 (28.9%) Soft tissue and skin, 8 (75.0%) Catheters and tubes

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H. A. Abu-Humaidan contributed to study conception, study design, analysis and interpretation of data, manuscript writing, and revision. F. M. Ahmad contributed to study design, acquisition, analysis and interpretation of data, manuscript writing, and revision. M. A. Al-Binni contributed to the analysis and interpretation of data and manuscript revision. A. B. Hani and M. Abu Abeeleh contributed to study design, manuscript writing, and revision. Acknowledgments e authors are grateful for the help provided by the medical and nursing teams at JUH ICUs. e authors also want to thank Dr. Wael ElRayes and Dr. Ted Cieslak for their valuable input and revision of the manuscript. is work was supported by e Deanship of Scientific Research at the University of Jordan.

Supplementary All results are presented as count and percent (n (%)). 1 More than one origin of infection were suspected in some patients. 2 More than one pathogen were isolated in some samples.