key: cord-0720143-orescxy2 authors: Fletcher, Jane; Bishop, Emma L; Harrison, Stephanie R; Swift, Amelia; Cooper, Sheldon C; Dimeloe, Sarah K; Raza, Karim; Hewison, Martin title: Autoimmune disease and interconnections with vitamin D date: 2022-02-23 journal: Endocr Connect DOI: 10.1530/ec-21-0554 sha: c77908b7472129ca25bbec08443f935cd23bae79 doc_id: 720143 cord_uid: orescxy2 Vitamin D has well-documented effects on calcium homeostasis and bone metabolism but recent studies suggest a much broader role for this secosteroid in human health. Key components of the vitamin D system, notably the vitamin D receptor (VDR) and the vitamin D-activating enzyme (1α-hydroxylase), are present in a wide array of tissues, notably macrophages, dendritic cells and T lymphocytes (T cells) from the immune system. Thus, serum 25-hydroxyvitamin D (25D) can be converted to hormonal 1,25-dihydroxyvitamin D (1,25D) within immune cells, and then interact with VDR and promote transcriptional and epigenomic responses in the same or neighbouring cells. These intracrine and paracrine effects of 1,25D have been shown to drive antibacterial or antiviral innate responses, as well as to attenuate inflammatory T cell adaptive immunity. Beyond these mechanistic observations, association studies have reported the correlation between low serum 25D levels and the risk and severity of human immune disorders including autoimmune diseases such as inflammatory bowel disease, multiple sclerosis, type 1 diabetes and rheumatoid arthritis. The proposed explanation for this is that decreased availability of 25D compromises immune cell synthesis of 1,25D leading to impaired innate immunity and over-exuberant inflammatory adaptive immunity. The aim of the current review is to explore the mechanistic basis for immunomodulatory effects of 25D and 1,25D in greater detail with specific emphasis on how vitamin D-deficiency (low serum levels of 25D) may lead to dysregulation of macrophage, dendritic cell and T cell function and increase the risk of inflammatory autoimmune disease. Vitamin D and its metabolites are secosteroids that are derived primarily from the action of UV light on skin to photolytically convert epidermal 7-dehydrocholesterol to vitamin D3 (cholecalciferol). Vitamin D3 can also be obtained from some animal-based food sources and vitamin D2 (ergocalciferol) can be obtained from some to generate 25-hydroxyvitamin D (25D). While this is recognised as the main circulating form of vitamin D, it has also been reported that sulphate and glucuronide conjugated forms of 25D are present in serum in abundance and may represent an additional substantial reservoir of 25D (2) . Vitamin D3 and D2 can be metabolised via the cholesterol side-chain cleavage enzyme to generate several alternative forms of vitamin D, including 20S-hydroxyvitamin D (3) . In classical vitamin D endocrinology, 25D is metabolised to the active form of vitamin D, 1,25-dihydroxyvitamin D (1,25D) via the enzyme 25-hydroxyvitamin D-1α-hydroxylase (1α-hydroxylase), with this activity occurring primarily in the proximal tubules of the kidney under positive and negative control by parathyroid hormone (PTH) and fibroblast growth factor 23 (FGF23) respectively. Binding to its cognate nuclear vitamin D receptor (VDR), 1,25D functions as a steroid hormone to regulate transcription (4) and epigenomic effects (5) . In this endocrine setting, 1,25D is thus able to promote the gastrointestinal acquisition of dietary minerals such as calcium and phosphate. 1,25D also plays a key role in stimulating FGF23 expression and suppressing PTH, and also promotes feedback regulation of 25D and 1,25D by stimulating catabolism of these forms of vitamin D to less active metabolites, notably via the enzyme 24-hydroxylase (6) . The lipophilic nature of vitamin D metabolites means that they are mainly transported in the circulation by the binding globulin vitamin D-binding protein (DBP). Binding to DBP is particularly important for 25D as renal reabsorption of the DBP-25D complex is essential for the renal synthesis of 1,25D (7) . However, in common with other steroid hormones, a small amount of 25D circulates either unbound (free 25D) or bound with low affinity to abundant serum proteins such as albumin. Although small, this fraction of 25D appears to be biologically important as free or bioavailable 25D may be the key form of 25D that is able to preferentially access extra-renal sites of 1α-hydroxylase activity (examples shown in Fig. 1 include the placenta, spleen (representing the immune system) and lungs) (7) . The relationship between 25D and DBP supports a role for the free hormone hypothesis in vitamin D physiology, but it has also highlighted the potential importance of non-endocrine actions of 25D and 1,25D. In many extra-renal sites, localised synthesis of 1,25D appears to facilitate endogenous VDR responses that are distinct from the classical endocrine actions of 1,25D. A tissue-specific mode of action for vitamin D appears to be particularly prominent in the immune system, and the Other prominent forms of 25D found in the circulation include 3epi-25D and sulphated and glucuronide forms of 25D. Intracrine synthesis of 1,25D from 25D in tissues such as the placenta, spleen (immune system) and lungs is associated with immunomodulatory effects. Endocrine synthesis of 1,25D in the kidneys is associated with mineral homeostasis and bone health. importance of this will be discussed in greater detail later in the current review. Approximately 50% of the UK population has a risk of 25D-deficiency based on Institute of Medicine parameters (<50 nM serum 25D) (8) . This has led to national recommendations for vitamin D supplementation (9) . However, current definitions of vitamin D-sufficiency are based on classical endocrine calcium/bone effects and may underestimate the requirements for extra-skeletal actions of vitamin D (10) . Importantly this includes immunomodulatory responses linking 25D-deficiency to autoimmune diseases including common chronic inflammatory disorders (11, 12, 13) . Furthermore, studies in vivo and in vitro have demonstrated potent antiinflammatory actions of 1,25D that affect the major cellular players associated with autoimmune disease (14, 15, 16, 17) . Supplementation with vitamin D or its analogues may therefore provide a cheap and safe therapeutic strategy for the prevention and/or treatment of autoimmune disorders but supplementation studies to address this have so far been limited and exploratory. The aim of the current review is to provide an update on the mechanistic basis for the interconnection of 25D and 1,25D with autoimmune disease, and how this informs future strategies for the clinical implementation of vitamin D supplementation. The initial observation linking vitamin D with the immune system was the presence of specific binding sites for 1,25D in cells from the immune system (18) . The subsequent identification of the VDR for 1,25D confirmed that this protein is expressed in activated, but not resting, lymphocytes and is ubiquitous in cells from the myeloid lineage such as monocytes and macrophages (19) . In parallel with these observations, it was noted that monocytes and macrophages exhibited the ability to metabolise 25D to 1,25D. This 1α-hydroxylase activity was initially observed in macrophages from patients with the granulomatous disease sarcoidosis where it was sufficient to elevate circulating levels of 1,25D in some patients leading to potential hypercalcemia (20) . Although immune cell 1α-hydroxylase activity has subsequently been demonstrated for a wide range of inflammatory and granulomatous diseases (21) , this does not appear to be an exclusively pathological phenomenon. The ability to metabolise 25D to 1,25D has also been described for normal healthy monocytes/macrophages (22) , which show enhanced expression of the genes for 1α-hydroxylase (CYP27B1), and VDR following immune stimulation (23) . The resulting endogenous synthesis and action of 1,25D have been shown to promote antibacterial (24, 25) , and antiviral (26, 27) innate immune responses to infection. The cell-specific nature of these responses, utilising endogenous 1α-hydroxylase activity, means that local levels of 25D rather than active 1,25D, are likely to be the primary determinant of vitamin D-mediated innate immune responses. Given that serum levels of 25D are the principal determinant of vitamin D 'status' in any given individual, the efficacy of antibacterial and antiviral immune responses may therefore be impaired in the setting of 25D-deficiency or enhanced following vitamin D supplementation (28, 29) . This facet of 25D/1,25D immunomodulation has attracted much recent interest with respect to the possible impact of serum 25D levels on COVID-19 (30) . The intracrine model described above for vitamin D in monocytes/macrophages and dendritic cells (DC) is not restricted to innate antibacterial and antiviral immunity. In studies that preceded the description of 1α-hydroxylase/ VDR-driven antibacterial responses in monocytes/ macrophages, we described similar localised metabolism of 25D to 1,25D in monocyte-derived DC leading to the suppression of antigen presentation cell surface antigens on DC such as CD80 and CD86 and concomitant inhibition of T lymphocytes (T cell) proliferation in co-culture analyses (31) . Thus, in addition to antibacterial/ antiviral innate immune responses, localised synthesis of 1,25D has the potential to influence antigen presentation and subsequent adaptive immune responses by T cells. Also, similar to antibacterial/antiviral responses, the efficacy of the DC intracrine system was enhanced by the maturation of DC using differentiation factors such as lipopolysaccharide and CD40-ligation, which further stimulated 1α-hydroxylase expression and the capacity for 1,25D production (31). To date, most studies of 1α-hydroxylase and VDR expression in innate immunity have utilised monocytes, macrophages and DC-derived in vitro from cultures of peripheral blood mononuclear cells. Nevertheless, expression of 1α-hydroxylase (32) and VDR (33) has been reported for DC isolated directly from human tissue, indicating that DC in vivo have the potential to utilise 25D to 1,25D metabolism in an intracrine fashion. Vitamin D deficiency or supplementation therefore has the potential to influence antigen presentation and subsequent T cell adaptive immune responses. Initial observations showed that 25D and 1,25D are able to supress DC maturation (34) and the expression of cell surface antigens such as CD80 and CD86 that are associated with antigen presentation to T cells (31, 32) , leading to impaired T cell activation (31, 35) . Subsequent analyses have shown that DC exposed to 1,25D exhibit an immature phenotype that promotes the development of tolerogenic T cells, specifically regulatory T cells (Treg) (36, 37). In DC isolated from human peripheral blood, this response appears to be specific for myeloid DC rather than plasmacytoid DC (pDC), despite both DC sub-sets expressing similar levels of VDR (38). These DC subsets have yet to be assessed for intracrine responses to 25D and so it is unclear whether differential sensitivity to vitamin D status occurs with DC in vivo. Moreover, pDC are known to exhibit a tolerogenic phenotype at baseline, and the addition of 1,25D may therefore have little further impact on DC phenotype. The induction of a tolerogenic DC phenotype by 1,25D is associated with phosphorylation and nuclear translocation of NF-κB p65, induction of CCL22, suppression of IL-12 (38) and induction of ILT3 (39). Thus, 1,25D-treated DC exhibit many of the characteristics of conventional tolerogenic DC with the exception of increased expression of CD14 and decreased CD1a (40). Specific markers of 1,25D-induced tolerogenic DC include low secretion of IL-23 and expression of microRNA (miR) 155 and increased expression of miR378. More recent studies using unbiased analyses have described the transcriptomic (41, 42) and proteomic (43) profiles associated with 1,25D-induced tolerogenic DC. This, in turn, has highlighted the importance of cell architecture/ morphology (43), and cell metabolism (44, 45) pathways in mediating DC responses to vitamin D, notably with respect to altered DC phenotype. In particular, the promotion of glycolysis, oxidative phosphorylation and the citric acid cycle appears to be essential for 1,25D responses in DC (44). At a functional level, these metabolic changes appear to facilitate changes in fatty acid synthesis that may be pivotal in the regulation of DC morphology and phenotype (46) . After phagocytosis of a pathogen, cells such as macrophages and DC process the resulting antigens and present these, together with major histocompatibility complex (MHC) class II molecules, to CD4+ helper T cells (Th) to stimulate T cell activation and adaptive immune responses. As detailed above and outlined in Fig. 2 , DC metabolism of 25D via 1α-hydroxylase and interaction of the resulting 1,25D with endogenous VDR can modulate antigen presentation by promoting a tolerogenic DC phenotype. T cells activated by 1,25D-treated DC exhibit decreased expression of IFNγ and CD154, increased CD152 (35), and increased FoxP3 expression characteristic of Treg (39). Treg can also be induced in the presence of 25D if T cells are activated by antigen-presenting cells such as DC, where there is a capacity for 1α-hydroxylase-mediated synthesis of 1,25D (47) . T cells activated in this way also show increased expression of CTLA4 and FoxP3, further highlighting the intracrine pathway for induction of Treg by vitamin D. However, T cells activated by 25D/1,25D-induced tolerogenic DC also exhibit decreased expression of IFNγ, IL-17 and IL-21, indicating suppression of inflammatory Th1, Th17 cells, and follicular B helper T cells (Thf) (47) . While all of these cells play an important role in facilitating active adaptive immune responses to a pathogenic challenge, the sustained presence of these cells may lead to unregulated inflammation. It has therefore been proposed that a key immune function of 1,25D is to moderate the magnitude of inflammatory adaptive immune responses, thereby limiting potentially detrimental autoimmune responses (48, 49) . It is interesting to note that the intracrine model for indirect regulation of T cells outlined in Fig. 2 appears to be highly dependent on the serum DBP, which is able to limit DC uptake of 25D. In studies in vitro, increased concentrations of DBP acted to suppress DC responses to 25D, consistent with the high binding affinity of 25D for DBP (47) . This observation is similar to that previously described for monocytes, where antibacterial responses to 25D in monocytes were enhanced in the absence of DBP (50). The induction of T cell responses, including the Th cells outlined above, takes place within microenvironments in tissues such as lymph nodes where multiple immune cells exist in close proximity. Thus, while 25D appears to utilise an intracrine model to synthesise 1,25D, regulate DC function and indirectly promote anti-inflammatory, pro-regulatory T cell responses, direct effects of both 25D and 1,25D on T cells may also be possible. Activated, but not resting, T cells express VDR (18) and T cells activated using cell-free systems show direct anti-inflammatory, pro-regulatory responses to 1,25D, including induction of CTLA4, FoxP3 and IL-10, and suppression of IFNγ, IL-17 and IL-21 (51) . Thus, in vivo, it is possible that some T cell responses may occur via conventional endocrine mechanisms utilising circulating 1,25D. An additional scenario outlined in Fig. 2 is that 1,25D synthesised locally from 25D by DC or monocytes/ macrophages can act in a paracrine fashion on adjacent T cells. These effects may also include actions on MHC class I-induced CD8+ cytotoxic T cells which also express VDR and respond to 1,25D (52) . Cytotoxic T cells play a key role in mediating the effects of vitamin D on tumour cells and bacterial and viral infections (53) . However, it has been reported that CD8+ cytotoxic T cells are not required for the effects of 1,25D in preventing the mouse model of multiple sclerosis (MS), experimental autoimmune encephalomyelitis (54) , suggesting that Th rather than cytotoxic T cells are the principal adaptive immunity cells required for autoimmunity effects of 1,25D. Interestingly, in mice, cytotoxic T cells may be a more important source of local 1α-hydroxylase expression than murine macrophages (55) , raising the possibility of intracrine actions of 1,25D in some T cell populations, and also suggesting that cytotoxic T cells may be an alternative source of paracrine 1,25D. Expression of CYP27B1 and intracrine responses to 1,25D have also been reported in human cytotoxic T cells (56) , but the precise magnitude and function of this source of immune 1,25D are still to be determined. Crucially, the expression of CYP27B1 has also been described in T cells (57) . To date, the relevance of this for T cell synthesis of 1,25D has been unclear but recent studies by Chauss et al. have shown that C3b Complement activation of human T cells via CD46 induced VDR and CYP27B1 expression in the resulting Th1 cells (58) . Here, both 25D and 1,25D were able to regulate expression of key genes associated with Th1 cell function, such as IFNγ and IL-17, demonstrating a functional intracrine pathway for 25D/1,25D in T cells (58) . In this particular study, the authors have hypothesised that intracrine metabolism could provide a basis for the reported link between low serum 25D and severity of Th1 cell inflammation in patients with COVID-19 disease. However, as outlined in Fig. 2 , it is also possible to speculate that similar dysregulation of intracrine 1,25D and Th1 cell function may contribute to the development and severity of the autoimmune disease. Serum transport of 25D by vitamin D-binding protein (DBP) may suppress cellular availability of 25D. Transcriptional response to 1,25D following binding to the vitamin D receptor (VDR) modulates antigen presentation through target molecules such as CD80 and CD86 to influence the activation of quiescent T helper (Th)0 cells to Th1, Th17 , Tfh and regulatory T cells (Treg). These T cell phenotypes require specific cytokines (shown next to arrows). Production of 1,25D by antigen-presenting cells may result in paracrine effects on adjacent VDR-expressing T cells leading to the down or up-regulation of specific T cell cytokines (shown next to the T cell sub-types). Production of 1,25D by Th1 cells may also result in intracrine effects to suppress inflammatory Th1 immunity. The dynamics of the intracrine vs paracrine effects of 1,25D on T cell function remain unclear, particularly as T cells are themselves able to stimulate DC expression of CYP27B1 when in contact with DC (47) . It is possible that both intracrine and paracrine actions of 1,25D occur in vivo, but the magnitude of influence of each pathway may depend on the local availability of 25D for metabolism. Specifically, lower concentrations of 25D may be adequate to drive the intracrine effects on DC antigen presentation, but not sufficient to enable secretion of enough 1,25D to influence T cells in a paracrine fashion. Conversely, conditions of 25D repletion may act to enhance both intracrine and paracrine responses to DC-synthesised 1,25D. Paracrine release of 1,25D may also provide a mechanism by which DC are able to support the initial activation of T cells while moderating over-exuberant inflammation. Specifically, there appears to be a reciprocal relationship between expression of 1α-hydroxylase and VDR as DC differentiate, with mature DC having higher levels of 1α-hydroxylase but lower VDR than immature DC (31). Thus, it is possible that for mature DC the intracrine pathway is limited by lower levels of VDR, while paracrine actions on neighbouring immature DC may be more viable as these cells express more VDR (59) . In this way, paracrine 1,25D would favour the maturation of some DCs to prime T cell activation, while inhibiting the further development of other less mature DCs to prevent an exponential increase in T cell activation. Another potential benefit of combined intracrine and paracrine actions of 1,25D during antigen presentation is to better facilitate the development of memory T cells. Inflammatory stimuli are required to activate DC to enable antigen presentation and subsequent expansion of effector T cells and the development of memory T cell pools. However, sustained inflammation impairs the effective generation of memory T cells via inappropriately sustained T cell proliferation and apoptosis (60) . In this setting, intracrine 1,25D may act to moderate DC maturation and antigen presentation, while paracrine 1,25D may attenuate the inflammatory environment during effector T cell development. Collectively, this would then favour the development of more tolerogenic T cell responses with enhanced memory T cell development. The majority of reports linking 1,25D with immune function have involved studies of normal peripheral blood cells cultured under inflammatory conditions in vitro. However, the effects of 1,25D may be more complex in the setting of inflammatory disease. In studies using synovial fluid, we showed that T cells from the inflamed joints of rheumatoid arthritis (RA) patients are insensitive to the anti-inflammatory effects of 1,25D relative to paired blood T cells from the same patient, despite expressing similar levels of VDR (61) . This T cell 'resistance' to 1,25D was due in part to the predominant memory T cell phenotype in RA joint synovial fluid. However, other, tissue-specific, mechanisms are also involved as memory T cells from RA synovial fluid were less sensitive to 1,25D than circulating memory T cells from the same patient (61) . Collectively these observations indicate that some of the T cell anti-inflammatory/tolerogenic effects of 1,25D on T cells observed in vitro may be less effective in vivo in the setting of inflammatory disease. Specifically, the ability of T cells to respond to 1,25D in an inflammatory disease setting correlated inversely with the capacity of phenotype change in the T cells -the more committed cells are phenotypically, the less responsive they are to 1,25D. The precise mechanism for this remains unclear but does not appear to be due to impaired capacity for 1,25D signalling. As outlined earlier, a key observation linking vitamin D with the immune system is the capacity for synthesis of 1,25D by macrophages from patients with sarcoidosis, with this extra-renal 1α-hydroxylase activity being sufficient to raise circulating levels of 1,25D in some patients (20) . Elevated serum levels of 1,25D have also been reported for patients with some autoimmune disorders. In patients with Crohn's disease, but not ulcerative colitis, raised serum 1,25D has been associated with decreased bone mineral density, although the precise source of increased 1,25D in these inflammatory bowel disease (IBD) patients remains unclear (62) . By contrast, in patients with RA, macrophages from the synovial fluid exhibit increased capacity for synthesis of 1,25D relative to macrophages from patients with osteoarthritis (63). However, this potential for enhanced macrophage 1,25D production in RA may also lead to elevated serum levels of 1,25D (64) , although this appears to be dependent on the availability of 25D in the RA patients (65) . In a recent analysis of multiple vitamin D metabolites from patients with RA, serum 1,25D levels were not statistically different from healthy controls, and were higher than paired synovial fluid 1,25D concentrations from the same patients (66) . Despite the apparent lack of elevated 1,25D in RA patients in the absence of vitamin D supplementation, both serum 25D and 1,25D levels have been reported to show inverse correlation with RA disease activity scores, suggesting that increased synovial inflammation is not driving systemic spill-over of any immune cell-derived 1,25D (67) . In other autoimmune disorders such as MS, serum 1,25D concentrations do not appear to be higher in patients vs controls (68) , and have been reported to decline with MS relapse rate (69) . In both cases, the circulating levels of 1,25D in patients with MS appear to be highly dependent on serum 25D concentrations and do not appear to be driven by inflammatory disease activity. The over-arching conclusion from these observations is that while extra-renal metabolism of 25D to 1,25D is a key feature of autoimmune disorders, this does not appear to be associated with the unregulated 1α-hydroxylase activity that is characteristic of granulomatous diseases. Low serum concentrations of 25D are a common health issue across the globe (70, 71) . While this continues to provide a challenge to calcium homeostasis and bone Table 1 Summary of reported studies of vitamin D and specific autoimmune disease. Publications for individual autoimmune diseases reporting effects of (i) serum vitamin D-deficiency; (ii) genetic variation in vitamin D status determined by Mendelian randomisation; (iii) SNPs for specific components of the vitamin D transport/metabolism/signalling system. (129) health in both adults and children (72, 73) , there has also been a dramatic increase in studies reporting extraskeletal health issues in the setting of 25D-deficiency (74) . Prominent amongst these are association studies linking low serum 25D status with immune dysregulation, notably autoimmune disease. Table 1 summarises the various reports that have assessed the impact of 25D status on specific autoimmune diseases. The central conclusion from these studies is that low serum 25D concentrations are associated with increased prevalence and/or severity of autoimmune disease, but the key question remains as to whether 25D-deficiency is a cause or consequence of autoimmune disease. To address this question, more recent studies have assessed the impact of genetic variability within the vitamin D system as a marker of lifelong variations in 25D status. One approach to this has been to determine if SNPs in genes associated with vitamin D metabolism, transport or function correlate with the prevalence or severity of autoimmune diseases. These genes primarily include serum DBP (GC), 25-hydroxylase (CYP2R1), CYP27B1, 24-hydroxylase (CYP24A1) and VDR. The general conclusion from these studies is that genetic variations within the vitamin D system, notably VDR, may contribute to autoimmune disease susceptibility. The major caveat is that the functional relevance of many of these SNPs is still unclear and, thus, the impact of this genetic variability cannot yet be fully defined. Some vitamin D-related SNPs, notably GC and CYP2R1, have been linked to serum 25D concentrations (75) . The correlation between vitamin D SNPs and serum 25D levels means that it is possible to predict gene haplotypes that are associated with higher vs lower serum 25D status over the lifetime of a particular individual. The prevalence of these SNPs in patient cohorts therefore has the potential to provide a statistically robust analysis of whether particular SNPs linked to low serum 25D are more common in a specific disease, a process known as Mendelian randomization (MR) (76) . The advantages of this strategy are that it enables the analysis of large numbers of subjects and provides a longterm perspective of serum 25D status that is independent of potential confounders and disease influence. The disadvantages of MR are that the genetic variations used in this analysis are only a small component of the overall serum level of 25D, with one study estimating this to be approximately 7.5% (77) . The other key caveat with MR is that this analysis of the genetic component of 25D status is less accurate at sub-optimal serum concentrations of 25D. Thus, in populations, including the UK, where serum 25D levels are known to be persistently low, particularly in winter months, MR analysis of vitamin D-related SNPs may have limited value. Nevertheless, MR strategy has been used to investigate further the links between serum 25D levels and specific autoimmune diseases (see Table 1 ). Broadly speaking, data do not support a significant association between genetically defined 25D levels and autoimmune disease. The notable exception to this is MS, where studies have reported significant associations for this disease (78, 79) . This, coupled with the association between low serum 25D and MS, and the links between MS and several individual vitamin D system SNPs, means that of all the autoimmune diseases, MS has the strongest link to vitamin D. In addition to studies of serum 25D status and genetic variations in humans, the associations between vitamin D and autoimmune disease have been explored using animal models, predominantly mice. This includes the analysis of mice under conditions of 25D deficiency, and or following supplementation with vitamin D or 1,25D, and the use of mice with knockout or transgenic expression of genes from the vitamin D system. A summary of key publications from these animal studies is shown in Table 2 . Consistent with human studies, 25D-deficient mice appear to be more susceptible to mouse models of specific autoimmune diseases. In contrast to human studies, vitamin D supplementation in mouse models of autoimmune disease has to date primarily involved treatment with 1,25D rather than conventional vitamin D supplementation used for human studies. In most cases this strategy ameliorated the specific disease, suggesting that elevated circulating 1,25D is sufficient to modulate inflammatory disease in animal models. This raises the question of whether the intracrine 25D metabolism model that has arisen from studies of human immune cells in vitro is generalisable to animal models in vivo. It is also important to recognise that potential hypercalcemic effects of 1,25D maybe less evident in mouse models of inflammatory disease, and the longterm efficacy of similar strategies in humans is far from clear and may be clinically unacceptable because of the potential hypercalcemic side-effects of 1,25D. In a similar fashion to 25D-deficiency, murine knockout of vitamin D genes such Vdr and Cyp27b1 appears to exacerbate mouse versions of all of the autoimmune diseases studied so far, suggesting that the vitamin D system plays some part in moderating the immune responses that are associated with the inflammatory disease in these mouse models. The aim of this review is to provide a mechanistic and model context for the interconnection between vitamin D and autoimmune disease. The general conclusion from the studies described in this review is that there is an association between low serum levels of 25D and autoimmunity. Supporting this statement are robust data that 1,25D has potent immunomodulatory effects on leukocytes, consistent associations between 25D-deficiency in humans and animals, autoimmune disease prevalence and severity and beneficial effects of vitamin D supplementation in animal models. To date, the crucial missing piece of the jigsaw has been the absence of robust randomised controlled trials of vitamin D supplementation in humans. This is a subject in its own right and has not been discussed in detail in the current review. Nevertheless, it is important to highlight recent randomised control trial data from the Vitamin D and Omega 3 Trial involving 25,871 participants supplemented with placebo, omega 3 fatty acids or vitamin D (2000 IU/day). Supplementation with vitamin D, with or without omega 3 fatty acids, was shown to decrease the incidence of autoimmune disease in this cohort by 22% after a follow-up of 5 years (with a 39% reduction when only the last 3 years of the study were considered) (80) . It is therefore clear that successful use of vitamin D to prevent autoimmune disease is possible but may require lengthy periods of supplementation. Another key challenge in designing effective supplementation trials to assess the potential impact of vitamin D on autoimmune disease is that it is still not clear what serum level of 25D is optimal for immune function. It is possible that the target level for serum 25D is different from more generalised recommendations made by organisations such as the Institute of Medicine that are based on bone health (81) . It is also possible that different levels of 25D are optimal for innate antibacterial and antiviral responses relative to anti-inflammatory effects. Another important consideration is whether vitamin D can be used to help prevent autoimmune disease or whether it provides any therapeutic benefit once the disease has become established. Again, it is quite likely that these two different facets of vitamin D treatment will require different serum levels of 25D for optimal function. It is also important to recognise that almost all studies of vitamin D supplementation and human disease outcomes have relied on a single marker to define vitamin D deficiency or -sufficiency -namely serum concentrations of 25D. Serum 25D is a relatively cheap and straightforward measurement but this neglects the fact that 25D is an inactive form of vitamin. Recent studies have demonstrated that, like other steroid hormones, vitamin D is defined by a wide range of metabolites that constitute the 'vitamin D metabolome', including active 1,25D (1) (see Fig. 1 ). Other, less commonly measured, vitamin D metabolites may also have distinct immunomodulatory actions in their own right. For example, recent studies have shown that the cholesterol side-chain cleavage enzyme can metabolise vitamin D before conversion to 25D (3). One of the metabolites from this enzyme activity, 20S-hydroxyvitamin D, has potent anti-inflammatory effects that do not require metabolism by CYP27B1 (82) . This coupled with the distinct mechanisms for the uptake and catabolism of 25D and 1,25D, as well as the presence of reservoirs of conjugated and epi forms of 25D outlined in Fig. 1 , means that relatively simplistic model for intracrine immune modulation initially proposed for 25D is now outmoded. In the original model, it was proposed that simple changes in serum 25D levels were sufficient to define extra-skeletal functions of vitamin D such as its effects on anti-inflammatory immunity. We can now greatly expand this model to include not only the concentration of 25D but also its transport, and target cell levels of 1α-hydroxylase and VDR, as well as the catabolic enzymes that attenuate 25D/1,25D function (Fig. 3) . Thus, it will be important in future studies to broaden our perspectives beyond simple serum measurement of 25D to include multiple other vitamin D metabolites and possibly genetic variants for proteins in the vitamin D system. The authors declare that there is no conflict of interest that could be perceived as prejudicing the impartiality of this review. Determinants of the impact of vitamin D on immune function. Schematic showing the diverse array of mechanisms that can influence the interaction between vitamin D and the immune system. The principal marker of vitamin D function continues to be serum levels of 25-hydroxyvitamin D (25D) as determined by exposure to UV light or dietary intake of vitamin D and liver activity of the enzyme 25-hydroxylase (25-OHase). However, vitamin D is also converted to alternative metabolites by the cholesterol side-chain cleavage enzyme. 25D can also circulate as epi or conjugated forms. Transport of vitamin D metabolites, particularly 25D, involves the vitamin D binding protein (DBP) which is essential for renal conversion of 25D to 1,25-dihydroxvitamin D (1,25D) by 1α-hydroxylase (1α-OHase). By contrast, acquisition of 25D by immune cells appears to involve free (unbound) 25D and subsequent 1α-OHase activity. In immune cells, the level of 1α-OHase expression, as well as expression of the vitamin D receptor (VDR) for 1,25D may be defined by various regulators of immune cell function including bacteria, viruses, complement and other immune cells. Collectively, these factors, along with catabolic activity of enzymes such as 24-hydroxylase act to enhance or attenuate the central effects of serum 25D in driving innate and adaptive immune responses. Text boxes on each side (dashed lines) describe the different mechanisms that modify the core effects of altered serum 25D levels. The vitamin D metabolome: an update on analysis and function Circulating conjugated and unconjugated vitamin D metabolite measurements by liquid chromatography mass spectrometry In vivo evidence for a novel pathway of vitamin D(3) metabolism initiated by P450scc and modified by CYP27B1 Genomic mechanisms governing mineral homeostasis and the regulation and maintenance of vitamin D metabolism. 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Vitamin D deficiency bone and growth plate manifestations in hypocalcemic infants: revealing the hidden body of the vitamin D deficiency iceberg Effect of vitamin D deficiency in developed countries Common genetic determinants of vitamin D insufficiency: a genome-wide association study The genetics of vitamin D Genome-wide association study in 79,366 European-ancestry individuals informs the genetic architecture of 25-hydroxyvitamin D levels Vitamin D and risk of multiple sclerosis: a Mendelian randomization study Mendelian randomization shows a causal effect of low vitamin D on multiple sclerosis risk Vitamin D and marine omega 3 fatty acid supplementation and incident autoimmune disease: VITAL randomized controlled trial The 2011 report on dietary reference intakes for calcium and vitamin D from the Institute of Medicine: what clinicians need to know 20S-Hydroxyvitamin D3, a secosteroid produced in humans, is anti-inflammatory and inhibits murine autoimmune arthritis Vitamin D level and risk of systemic lupus erythematosus and rheumatoid arthritis: a Mendelian randomization The role of genetic polymorphisms regulating vitamin D levels in rheumatoid arthritis outcome: a Mendelian randomisation approach. Annals of the Rheumatic Diseases Vitamin D receptor (VDR) gene polymorphism and risk of rheumatoid arthritis (RA): systematic review and meta-analysis Vitamin D-binding protein (group-specific component) has decreased expression in rheumatoid arthritis Vitamin D deficiency is associated with severity of dry eye symptoms and primary Sjogren's syndrome: a systematic review and meta-analysis The association between vitamin D level and Sjogren's syndrome: a meta-analysis Comparison of plasma vitamin D levels in patients with Sjogren's syndrome and healthy subjects Association of vitamin D deficiency and disease activity in systemic e210554 11:3 lupus erythematosus patients: two-year follow-up study Vitamin D deficiency in systemic lupus erythematosus A population association study of vitamin D receptor gene polymorphisms and haplotypes with the risk of systemic lupus erythematosus in a Chinese population Vitamin D status and CYP27B1-1260 promoter polymorphism in Tunisian patients with systemic lupus erythematosus Association between inflammatory bowel disease and vitamin D deficiency: a systematic review and meta-analysis Systematic review with meta-analysis: association of vitamin D status with clinical outcomes in adult patients with inflammatory bowel disease Vitamin D and inflammatory bowel disease: Mendelian randomization analyses in the Copenhagen studies and UK Biobank A single nucleotide polymorphism in the vitamin D receptor gene is associated with decreased levels of the protein and a penetrating pattern in Crohn's disease Association of a common vitamin D-binding protein polymorphism with inflammatory bowel disease Vitamin D and multiple sclerosis: a comprehensive review Mendelian randomization in multiple sclerosis: a causal role for vitamin D and obesity? Multiple Sclerosis Olsson T & Kockum I. Confirmation of association between multiple sclerosis and CYP27B1 Sadovnick AD & Ebers GC. Evidence for genetic regulation of vitamin D status in twins with multiple sclerosis Association of CYP2R1 rs10766197 with MS risk and disease progression Vitamin D-binding protein gene polymorphisms are not associated with MS risk in an Italian cohort Vitamin D and genetic susceptibility to multiple sclerosis A dose-response metaanalysis between serum concentration of 25-hydroxy vitamin D and risk of type 1 diabetes mellitus Lower serum 25 (OH) D concentrations in type 1 diabetes: a meta-analysis. Diabetes Research and Clinical Practice Vitamin D levels and risk of type 1 diabetes: a Mendelian randomization study Analysis of the vitamin D receptor gene sequence variants in type 1 diabetes Vitamin D pathway genetic variation and type 1 diabetes: a case-control association study Vitamin D deficiency in patients with primary immune-mediated peripheral neuropathies Relationship between vitamin D level and mortality in adults with psoriasis: a retrospective cohort study of NHANES data Hypovitaminosis D is associated with psoriasis: a systematic review and meta-analysis The relevance of serum vitamin D in psoriasis: a review Vitamin D receptor gene polymorphisms are associated with psoriasis susceptibility and the clinical response to calcipotriol in psoriatic patients 25-Hydroxyvitamin D serum level in Hashimoto's thyroiditis, but not Graves' disease is relatively deficient Vitamin D and Graves' disease: a meta-analysis update Meta-analysis of the association between vitamin D and autoimmune thyroid disease The VDR gene confers a genetic predisposition to Graves' disease and Graves' ophthalmopathy in the Southwest Chinese Han population Genetic susceptibility to autoimmune thyroid diseases in a Chinese Han population: role of vitamin D receptor gene polymorphisms A haplotype of the CYP27B1 promoter is associated with autoimmune Addison's disease but not with Graves' disease in a UK population Low vitamin D serum levels in a cohort of myasthenia gravis patients in Argentina Low serum vitamin D levels in patients with myasthenia gravis Vitamin D deficiency in patients with myasthenia gravis and improvement of fatigue after supplementation of vitamin D3: a pilot study Vitamin D receptor polymorphism and myasthenia gravis in Chinese Han population Vitamin D levels in patients with small and medium vessel vasculitis Serum vitamin D level correlates with disease activity and health-related quality of life in antineutrophil cytoplasmic antibody-associated vasculitis Relationship between vitamin D level and Bechcet's disease activity: a systematic review and meta-analysis Higher 25-hydroxyvitamin D level is associated with increased risk for Behcet's disease 25-Dihydroxycholecalciferol inhibits the progression of arthritis in murine models of human arthritis RR & Zheng SG. 1,25-Dihydroxyvitamin D3 ameliorates collagen-induced arthritis via suppression of Th17 cells through miR-124 mediated inhibition of IL-6 signaling PD-L1-and calcitriol-dependent liposomal antigen-specific regulation of systemic inflammatory autoimmune disease Vitamin D receptor regulates TNFmediated arthritis. Annals of the Rheumatic Diseases 1,25-Dihydroxy-vitamin D3 with tumor necrosis factor-alpha protects against rheumatoid arthritis by promoting p53 acetylationmediated apoptosis via Sirt1 in synoviocytes Brief Report: Vitamin D deficiency is associated with endothelial dysfunction and increases type I interferon gene expression in a murine model of systemic lupus erythematosus Low levels of vitamin D promote memory B cells in lupus Vitamin D supplementation ameliorates arthritis but does not alleviates renal injury in pristane-induced lupus model Vitamin D deficiency in mice impairs colonic antibacterial activity and predisposes to colitis Vitamin D deficiency promotes epithelial barrier dysfunction and intestinal inflammation Dietary vitamin D3 deficiency alters intestinal mucosal defense and increases susceptibility to Citrobacter rodentium-induced colitis Vitamin D deficiency exacerbates colonic inflammation due to activation of the local renin-angiotensin system in the colon Efficacy of a potent and safe vitamin D receptor agonist for the treatment of inflammatory bowel disease Vitamin D regulates the gut microbiome and protects mice from dextran sodium sulfateinduced colitis Vitamin D supplementation partially affects colonic changes in dextran sulfate sodium-induced colitis obese mice but not lean mice A crucial role for the vitamin D receptor in experimental inflammatory bowel diseases Novel role of the vitamin D receptor in maintaining the integrity of the intestinal mucosal barrier Altered endocrine and autocrine metabolism of vitamin D in a mouse model of gastrointestinal inflammation Implication of intestinal VDR deficiency in inflammatory bowel disease Vitamin D deficiency diminishes the severity and delays onset of experimental autoimmune encephalomyelitis Development of experimental autoimmune encephalomyelitis (EAE) in mice requires vitamin D and the vitamin D receptor Prenatal vitamin D deficiency induces an early and more severe experimental autoimmune encephalomyelitis in the second generation 25-Dihydroxyvitamin D3 reversibly blocks the progression of relapsing encephalomyelitis, a model of multiple sclerosis Gene expression analysis suggests that 1,25-dihydroxyvitamin D3 reverses experimental autoimmune encephalomyelitis by stimulating inflammatory cell apoptosis IL-10 signaling is essential for 1,25-dihydroxyvitamin D3-mediated inhibition of experimental autoimmune encephalomyelitis 25-Dihydroxyvitamin D3 acts directly on the T lymphocyte vitamin D receptor to inhibit experimental autoimmune encephalomyelitis The absence of 25-hydroxyvitamin D3-1alpha-hydroxylase potentiates the suppression of EAE in mice by ultraviolet light Vitamin D deficiency in early life accelerates type 1 diabetes in non-obese diabetic mice Vitamin D and 1,25-dihydroxyvitamin D3 as modulators in the immune system Oral administration of 1,25-dihydroxyvitamin D3 completely protects NOD mice from insulin-dependent diabetes mellitus In vitro and in vivo analysis of the immune system of vitamin D receptor knockout mice Unaltered diabetes presentation in NOD mice lacking the vitamin D receptor Vitamin D receptor overexpression in beta-cells ameliorates diabetes in mice Vitamin-Dbinding protein contributes to the maintenance of alpha cell function and glucagon secretion Regulation of IL-1 family cytokines IL-1alpha, IL-1 receptor antagonist, and IL-18 by 1,25-dihydroxyvitamin D3 in primary keratinocytes Vitamin D deficiency modulates Graves' hyperthyroidism induced in BALB/c mice by thyrotropin receptor immunization Vitamin D3 ameliorates herpes simplex virusinduced Behcet's disease-like inflammation in a mouse model through down-regulation of toll-like receptors