id	sid	tid	token	lemma	pos
xd07gq70365	1	1	an	an	DET
xd07gq70365	1	2	epithelium	epithelium	NOUN
xd07gq70365	1	3	is	be	AUX
xd07gq70365	1	4	a	a	DET
xd07gq70365	1	5	sheet	sheet	NOUN
xd07gq70365	1	6	of	of	ADP
xd07gq70365	1	7	constantly	constantly	ADV
xd07gq70365	1	8	growing	grow	VERB
xd07gq70365	1	9	cells	cell	NOUN
xd07gq70365	1	10	that	that	PRON
xd07gq70365	1	11	strongly	strongly	ADV
xd07gq70365	1	12	adhere	adhere	VERB
xd07gq70365	1	13	to	to	ADP
xd07gq70365	1	14	their	their	PRON
xd07gq70365	1	15	neighbors	neighbor	NOUN
xd07gq70365	1	16	.	.	PUNCT
xd07gq70365	2	1	studying	study	VERB
xd07gq70365	2	2	mechanisms	mechanism	NOUN
xd07gq70365	2	3	that	that	PRON
xd07gq70365	2	4	regulate	regulate	VERB
xd07gq70365	2	5	the	the	DET
xd07gq70365	2	6	growth	growth	NOUN
xd07gq70365	2	7	of	of	ADP
xd07gq70365	2	8	epithelium	epithelium	NOUN
xd07gq70365	2	9	is	be	AUX
xd07gq70365	2	10	important	important	ADJ
xd07gq70365	2	11	for	for	ADP
xd07gq70365	2	12	both	both	DET
xd07gq70365	2	13	understanding	understanding	NOUN
xd07gq70365	2	14	of	of	ADP
xd07gq70365	2	15	development	development	NOUN
xd07gq70365	2	16	in	in	ADP
xd07gq70365	2	17	general	general	ADJ
xd07gq70365	2	18	and	and	CCONJ
xd07gq70365	2	19	finding	find	VERB
xd07gq70365	2	20	solutions	solution	NOUN
xd07gq70365	2	21	for	for	ADP
xd07gq70365	2	22	diseases	disease	NOUN
xd07gq70365	2	23	.	.	PUNCT
xd07gq70365	3	1	the	the	DET
xd07gq70365	3	2	regulation	regulation	NOUN
xd07gq70365	3	3	of	of	ADP
xd07gq70365	3	4	cell	cell	NOUN
xd07gq70365	3	5	growth	growth	NOUN
xd07gq70365	3	6	and	and	CCONJ
xd07gq70365	3	7	division	division	NOUN
xd07gq70365	3	8	is	be	AUX
xd07gq70365	3	9	one	one	NUM
xd07gq70365	3	10	of	of	ADP
xd07gq70365	3	11	the	the	DET
xd07gq70365	3	12	key	key	ADJ
xd07gq70365	3	13	mechanisms	mechanism	NOUN
xd07gq70365	3	14	that	that	PRON
xd07gq70365	3	15	ensure	ensure	VERB
xd07gq70365	3	16	proper	proper	ADJ
xd07gq70365	3	17	development	development	NOUN
xd07gq70365	3	18	of	of	ADP
xd07gq70365	3	19	living	live	VERB
xd07gq70365	3	20	organisms	organism	NOUN
xd07gq70365	3	21	.	.	PUNCT
xd07gq70365	4	1	compromised	compromise	VERB
xd07gq70365	4	2	regulation	regulation	NOUN
xd07gq70365	4	3	of	of	ADP
xd07gq70365	4	4	proliferation	proliferation	NOUN
xd07gq70365	4	5	could	could	AUX
xd07gq70365	4	6	lead	lead	VERB
xd07gq70365	4	7	to	to	ADP
xd07gq70365	4	8	cancer	cancer	NOUN
xd07gq70365	4	9	,	,	PUNCT
xd07gq70365	4	10	which	which	PRON
xd07gq70365	4	11	often	often	ADV
xd07gq70365	4	12	starts	start	VERB
xd07gq70365	4	13	from	from	ADP
xd07gq70365	4	14	epithelial	epithelial	ADJ
xd07gq70365	4	15	cells	cell	NOUN
xd07gq70365	4	16	.	.	PUNCT
xd07gq70365	5	1	despite	despite	SCONJ
xd07gq70365	5	2	their	their	PRON
xd07gq70365	5	3	importance	importance	NOUN
xd07gq70365	5	4	,	,	PUNCT
xd07gq70365	5	5	the	the	DET
xd07gq70365	5	6	exact	exact	ADJ
xd07gq70365	5	7	mechanisms	mechanism	NOUN
xd07gq70365	5	8	that	that	PRON
xd07gq70365	5	9	control	control	VERB
xd07gq70365	5	10	proliferation	proliferation	NOUN
xd07gq70365	5	11	is	be	AUX
xd07gq70365	5	12	still	still	ADV
xd07gq70365	5	13	under	under	ADP
xd07gq70365	5	14	debate	debate	NOUN
xd07gq70365	5	15	.	.	PUNCT
xd07gq70365	6	1	some	some	PRON
xd07gq70365	6	2	believe	believe	VERB
xd07gq70365	6	3	that	that	SCONJ
xd07gq70365	6	4	mechanical	mechanical	ADJ
xd07gq70365	6	5	feedback	feedback	NOUN
xd07gq70365	6	6	plays	play	VERB
xd07gq70365	6	7	the	the	DET
xd07gq70365	6	8	most	most	ADV
xd07gq70365	6	9	important	important	ADJ
xd07gq70365	6	10	role	role	NOUN
xd07gq70365	6	11	in	in	ADP
xd07gq70365	6	12	growth	growth	NOUN
xd07gq70365	6	13	regulation	regulation	NOUN
xd07gq70365	6	14	,	,	PUNCT
xd07gq70365	6	15	while	while	SCONJ
xd07gq70365	6	16	others	other	NOUN
xd07gq70365	6	17	believe	believe	VERB
xd07gq70365	6	18	that	that	SCONJ
xd07gq70365	6	19	signaling	signal	VERB
xd07gq70365	6	20	molecules	molecule	NOUN
xd07gq70365	6	21	could	could	AUX
xd07gq70365	6	22	be	be	AUX
xd07gq70365	6	23	responsible	responsible	ADJ
xd07gq70365	6	24	for	for	ADP
xd07gq70365	6	25	regulation	regulation	NOUN
xd07gq70365	6	26	of	of	ADP
xd07gq70365	6	27	growth	growth	NOUN
xd07gq70365	6	28	pattern	pattern	NOUN
xd07gq70365	6	29	.	.	PUNCT
xd07gq70365	7	1	computational	computational	ADJ
xd07gq70365	7	2	modeling	modeling	NOUN
xd07gq70365	7	3	is	be	AUX
xd07gq70365	7	4	used	use	VERB
xd07gq70365	7	5	in	in	ADP
xd07gq70365	7	6	this	this	DET
xd07gq70365	7	7	study	study	NOUN
xd07gq70365	7	8	to	to	PART
xd07gq70365	7	9	provide	provide	VERB
xd07gq70365	7	10	new	new	ADJ
xd07gq70365	7	11	insights	insight	NOUN
xd07gq70365	7	12	into	into	ADP
xd07gq70365	7	13	cellular	cellular	ADJ
xd07gq70365	7	14	growth	growth	NOUN
xd07gq70365	7	15	regulation	regulation	NOUN
xd07gq70365	7	16	.	.	PUNCT
xd07gq70365	8	1	up	up	ADP
xd07gq70365	8	2	to	to	ADP
xd07gq70365	8	3	date	date	NOUN
xd07gq70365	8	4	,	,	PUNCT
xd07gq70365	8	5	various	various	ADJ
xd07gq70365	8	6	approaches	approach	NOUN
xd07gq70365	8	7	have	have	AUX
xd07gq70365	8	8	been	be	AUX
xd07gq70365	8	9	employed	employ	VERB
xd07gq70365	8	10	to	to	PART
xd07gq70365	8	11	model	model	VERB
xd07gq70365	8	12	the	the	DET
xd07gq70365	8	13	proliferation	proliferation	NOUN
xd07gq70365	8	14	of	of	ADP
xd07gq70365	8	15	epithelial	epithelial	ADJ
xd07gq70365	8	16	cells	cell	NOUN
xd07gq70365	8	17	.	.	PUNCT
xd07gq70365	9	1	there	there	PRON
xd07gq70365	9	2	are	be	VERB
xd07gq70365	9	3	topological	topological	ADJ
xd07gq70365	9	4	models	model	NOUN
xd07gq70365	9	5	that	that	PRON
xd07gq70365	9	6	emphasize	emphasize	VERB
xd07gq70365	9	7	cellular	cellular	ADJ
xd07gq70365	9	8	connectivity	connectivity	NOUN
xd07gq70365	9	9	,	,	PUNCT
xd07gq70365	9	10	lattice	lattice	NOUN
xd07gq70365	9	11	-	-	PUNCT
xd07gq70365	9	12	based	base	VERB
xd07gq70365	9	13	models	model	NOUN
xd07gq70365	9	14	that	that	PRON
xd07gq70365	9	15	use	use	VERB
xd07gq70365	9	16	fixed	fix	VERB
xd07gq70365	9	17	lattice	lattice	NOUN
xd07gq70365	9	18	to	to	PART
xd07gq70365	9	19	represent	represent	VERB
xd07gq70365	9	20	cells	cell	NOUN
xd07gq70365	9	21	,	,	PUNCT
xd07gq70365	9	22	and	and	CCONJ
xd07gq70365	9	23	off	off	ADP
xd07gq70365	9	24	-	-	PUNCT
xd07gq70365	9	25	lattice	lattice	NOUN
xd07gq70365	9	26	models	model	NOUN
xd07gq70365	9	27	that	that	PRON
xd07gq70365	9	28	describe	describe	VERB
xd07gq70365	9	29	cells	cell	NOUN
xd07gq70365	9	30	by	by	ADP
xd07gq70365	9	31	collection	collection	NOUN
xd07gq70365	9	32	of	of	ADP
xd07gq70365	9	33	connected	connected	ADJ
xd07gq70365	9	34	points	point	NOUN
xd07gq70365	9	35	.	.	PUNCT
xd07gq70365	10	1	however	however	ADV
xd07gq70365	10	2	,	,	PUNCT
xd07gq70365	10	3	existing	existing	ADJ
xd07gq70365	10	4	models	model	NOUN
xd07gq70365	10	5	are	be	AUX
xd07gq70365	10	6	insufficient	insufficient	ADJ
xd07gq70365	10	7	to	to	PART
xd07gq70365	10	8	capture	capture	VERB
xd07gq70365	10	9	mechanical	mechanical	ADJ
xd07gq70365	10	10	properties	property	NOUN
xd07gq70365	10	11	of	of	ADP
xd07gq70365	10	12	the	the	DET
xd07gq70365	10	13	epithelial	epithelial	ADJ
xd07gq70365	10	14	sheet	sheet	NOUN
xd07gq70365	10	15	,	,	PUNCT
xd07gq70365	10	16	partially	partially	ADV
xd07gq70365	10	17	because	because	SCONJ
xd07gq70365	10	18	of	of	ADP
xd07gq70365	10	19	the	the	DET
xd07gq70365	10	20	artificially	artificially	ADV
xd07gq70365	10	21	imposed	impose	VERB
xd07gq70365	10	22	geometrical	geometrical	ADJ
xd07gq70365	10	23	constraints	constraint	NOUN
xd07gq70365	10	24	,	,	PUNCT
xd07gq70365	10	25	which	which	PRON
xd07gq70365	10	26	often	often	ADV
xd07gq70365	10	27	restrict	restrict	VERB
xd07gq70365	10	28	cells	cell	NOUN
xd07gq70365	10	29	to	to	PART
xd07gq70365	10	30	be	be	AUX
xd07gq70365	10	31	polygon	polygon	NOUN
xd07gq70365	10	32	-	-	PUNCT
xd07gq70365	10	33	shaped	shape	VERB
xd07gq70365	10	34	.	.	PUNCT
xd07gq70365	11	1	moreover	moreover	ADV
xd07gq70365	11	2	,	,	PUNCT
xd07gq70365	11	3	the	the	DET
xd07gq70365	11	4	mechanical	mechanical	ADJ
xd07gq70365	11	5	interaction	interaction	NOUN
xd07gq70365	11	6	between	between	ADP
xd07gq70365	11	7	cells	cell	NOUN
xd07gq70365	11	8	might	might	AUX
xd07gq70365	11	9	be	be	AUX
xd07gq70365	11	10	over	over	ADV
xd07gq70365	11	11	-	-	PUNCT
xd07gq70365	11	12	simplified	simplify	VERB
xd07gq70365	11	13	because	because	SCONJ
xd07gq70365	11	14	of	of	ADP
xd07gq70365	11	15	this	this	DET
xd07gq70365	11	16	approximation	approximation	NOUN
xd07gq70365	11	17	.	.	PUNCT
xd07gq70365	12	1	a	a	DET
xd07gq70365	12	2	novel	novel	ADJ
xd07gq70365	12	3	cell	cell	NOUN
xd07gq70365	12	4	-	-	PUNCT
xd07gq70365	12	5	based	base	VERB
xd07gq70365	12	6	off	off	ADP
xd07gq70365	12	7	-	-	PUNCT
xd07gq70365	12	8	lattice	lattice	NOUN
xd07gq70365	12	9	computational	computational	ADJ
xd07gq70365	12	10	model	model	NOUN
xd07gq70365	12	11	for	for	ADP
xd07gq70365	12	12	studying	study	VERB
xd07gq70365	12	13	epithelial	epithelial	ADJ
xd07gq70365	12	14	proliferation	proliferation	NOUN
xd07gq70365	12	15	is	be	AUX
xd07gq70365	12	16	developed	develop	VERB
xd07gq70365	12	17	in	in	ADP
xd07gq70365	12	18	this	this	DET
xd07gq70365	12	19	study	study	NOUN
xd07gq70365	12	20	.	.	PUNCT
xd07gq70365	13	1	the	the	DET
xd07gq70365	13	2	model	model	NOUN
xd07gq70365	13	3	provides	provide	VERB
xd07gq70365	13	4	a	a	DET
xd07gq70365	13	5	flexible	flexible	ADJ
xd07gq70365	13	6	representation	representation	NOUN
xd07gq70365	13	7	for	for	ADP
xd07gq70365	13	8	cellular	cellular	ADJ
xd07gq70365	13	9	geometry	geometry	NOUN
xd07gq70365	13	10	,	,	PUNCT
xd07gq70365	13	11	without	without	ADP
xd07gq70365	13	12	imposing	impose	VERB
xd07gq70365	13	13	assumption	assumption	NOUN
xd07gq70365	13	14	of	of	ADP
xd07gq70365	13	15	polygon	polygon	NOUN
xd07gq70365	13	16	cell	cell	NOUN
xd07gq70365	13	17	shape	shape	NOUN
xd07gq70365	13	18	.	.	PUNCT
xd07gq70365	14	1	epithelial	epithelial	ADJ
xd07gq70365	14	2	cells	cell	NOUN
xd07gq70365	14	3	appear	appear	VERB
xd07gq70365	14	4	as	as	SCONJ
xd07gq70365	14	5	polygon	polygon	NOUN
xd07gq70365	14	6	-	-	PUNCT
xd07gq70365	14	7	shaped	shape	VERB
xd07gq70365	14	8	in	in	ADP
xd07gq70365	14	9	model	model	NOUN
xd07gq70365	14	10	simulations	simulation	NOUN
xd07gq70365	14	11	as	as	ADP
xd07gq70365	14	12	a	a	DET
xd07gq70365	14	13	result	result	NOUN
xd07gq70365	14	14	of	of	ADP
xd07gq70365	14	15	mechanical	mechanical	ADJ
xd07gq70365	14	16	interaction	interaction	NOUN
xd07gq70365	14	17	.	.	PUNCT
xd07gq70365	15	1	cellular	cellular	ADJ
xd07gq70365	15	2	network	network	NOUN
xd07gq70365	15	3	transitions	transition	NOUN
xd07gq70365	15	4	in	in	ADP
xd07gq70365	15	5	model	model	NOUN
xd07gq70365	15	6	simulations	simulation	NOUN
xd07gq70365	15	7	also	also	ADV
xd07gq70365	15	8	naturally	naturally	ADV
xd07gq70365	15	9	emerge	emerge	VERB
xd07gq70365	15	10	as	as	ADP
xd07gq70365	15	11	a	a	DET
xd07gq70365	15	12	result	result	NOUN
xd07gq70365	15	13	of	of	ADP
xd07gq70365	15	14	cellular	cellular	ADJ
xd07gq70365	15	15	interaction	interaction	NOUN
xd07gq70365	15	16	,	,	PUNCT
xd07gq70365	15	17	compared	compare	VERB
xd07gq70365	15	18	with	with	ADP
xd07gq70365	15	19	existing	exist	VERB
xd07gq70365	15	20	models	model	NOUN
xd07gq70365	15	21	which	which	PRON
xd07gq70365	15	22	often	often	ADV
xd07gq70365	15	23	include	include	VERB
xd07gq70365	15	24	ad	ad	NOUN
xd07gq70365	15	25	hoc	hoc	X
xd07gq70365	15	26	assumptions	assumption	NOUN
xd07gq70365	15	27	for	for	ADP
xd07gq70365	15	28	such	such	ADJ
xd07gq70365	15	29	transitions	transition	NOUN
xd07gq70365	15	30	.	.	PUNCT
xd07gq70365	16	1	results	result	NOUN
xd07gq70365	16	2	in	in	ADP
xd07gq70365	16	3	the	the	DET
xd07gq70365	16	4	esem	esem	PROPN
xd07gq70365	16	5	simulations	simulation	NOUN
xd07gq70365	16	6	match	match	VERB
xd07gq70365	16	7	very	very	ADV
xd07gq70365	16	8	well	well	ADV
xd07gq70365	16	9	with	with	ADP
xd07gq70365	16	10	experimental	experimental	ADJ
xd07gq70365	16	11	findings	finding	NOUN
xd07gq70365	16	12	,	,	PUNCT
xd07gq70365	16	13	such	such	ADJ
xd07gq70365	16	14	as	as	ADP
xd07gq70365	16	15	overall	overall	ADJ
xd07gq70365	16	16	cell	cell	NOUN
xd07gq70365	16	17	shape	shape	NOUN
xd07gq70365	16	18	polygon	polygon	NOUN
xd07gq70365	16	19	class	class	NOUN
xd07gq70365	16	20	distribution	distribution	NOUN
xd07gq70365	16	21	on	on	ADP
xd07gq70365	16	22	the	the	DET
xd07gq70365	16	23	epithelial	epithelial	ADJ
xd07gq70365	16	24	sheet	sheet	NOUN
xd07gq70365	16	25	,	,	PUNCT
xd07gq70365	16	26	and	and	CCONJ
xd07gq70365	16	27	the	the	DET
xd07gq70365	16	28	shifting	shifting	NOUN
xd07gq70365	16	29	of	of	ADP
xd07gq70365	16	30	polygon	polygon	NOUN
xd07gq70365	16	31	class	class	NOUN
xd07gq70365	16	32	during	during	ADP
xd07gq70365	16	33	mitosis	mitosis	NOUN
xd07gq70365	16	34	.	.	PUNCT
xd07gq70365	17	1	it	it	PRON
xd07gq70365	17	2	is	be	AUX
xd07gq70365	17	3	also	also	ADV
xd07gq70365	17	4	worth	worth	ADJ
xd07gq70365	17	5	mentioning	mention	VERB
xd07gq70365	17	6	that	that	SCONJ
xd07gq70365	17	7	the	the	DET
xd07gq70365	17	8	new	new	ADJ
xd07gq70365	17	9	model	model	NOUN
xd07gq70365	17	10	reproduces	reproduce	VERB
xd07gq70365	17	11	mitotic	mitotic	ADJ
xd07gq70365	17	12	rounding	round	VERB
xd07gq70365	17	13	behavior	behavior	NOUN
xd07gq70365	17	14	in	in	ADP
xd07gq70365	17	15	proliferating	proliferate	VERB
xd07gq70365	17	16	epithelia	epithelia	PROPN
xd07gq70365	17	17	,	,	PUNCT
xd07gq70365	17	18	which	which	PRON
xd07gq70365	17	19	is	be	AUX
xd07gq70365	17	20	commonly	commonly	ADV
xd07gq70365	17	21	observed	observe	VERB
xd07gq70365	17	22	but	but	CCONJ
xd07gq70365	17	23	never	never	ADV
xd07gq70365	17	24	been	be	AUX
xd07gq70365	17	25	modeled	model	VERB
xd07gq70365	17	26	in	in	ADP
xd07gq70365	17	27	other	other	ADJ
xd07gq70365	17	28	computational	computational	ADJ
xd07gq70365	17	29	models	model	NOUN
xd07gq70365	17	30	.	.	PUNCT
xd07gq70365	18	1	in	in	ADP
xd07gq70365	18	2	addition	addition	NOUN
xd07gq70365	18	3	,	,	PUNCT
xd07gq70365	18	4	this	this	DET
xd07gq70365	18	5	thesis	thesis	NOUN
xd07gq70365	18	6	introduces	introduce	VERB
xd07gq70365	18	7	a	a	DET
xd07gq70365	18	8	parallel	parallel	ADJ
xd07gq70365	18	9	algorithm	algorithm	NOUN
xd07gq70365	18	10	that	that	PRON
xd07gq70365	18	11	runs	run	VERB
xd07gq70365	18	12	on	on	ADP
xd07gq70365	18	13	general	general	ADJ
xd07gq70365	18	14	purpose	purpose	NOUN
xd07gq70365	18	15	graphical	graphical	ADJ
xd07gq70365	18	16	processing	processing	NOUN
xd07gq70365	18	17	unit	unit	NOUN
xd07gq70365	18	18	for	for	ADP
xd07gq70365	18	19	model	model	NOUN
xd07gq70365	18	20	implementation	implementation	NOUN
xd07gq70365	18	21	,	,	PUNCT
xd07gq70365	18	22	overcoming	overcome	VERB
xd07gq70365	18	23	computational	computational	ADJ
xd07gq70365	18	24	challenges	challenge	NOUN
xd07gq70365	18	25	brought	bring	VERB
xd07gq70365	18	26	by	by	ADP
xd07gq70365	18	27	the	the	DET
xd07gq70365	18	28	new	new	ADJ
xd07gq70365	18	29	model	model	NOUN
xd07gq70365	18	30	.	.	PUNCT
xd07gq70365	19	1	a	a	DET
xd07gq70365	19	2	complete	complete	ADJ
xd07gq70365	19	3	source	source	NOUN
xd07gq70365	19	4	code	code	NOUN
xd07gq70365	19	5	package	package	NOUN
xd07gq70365	19	6	of	of	ADP
xd07gq70365	19	7	the	the	DET
xd07gq70365	19	8	parallel	parallel	ADJ
xd07gq70365	19	9	algorithm	algorithm	PROPN
xd07gq70365	19	10	is	be	AUX
xd07gq70365	19	11	provided	provide	VERB
xd07gq70365	19	12	as	as	ADP
xd07gq70365	19	13	a	a	DET
xd07gq70365	19	14	supplement	supplement	NOUN
xd07gq70365	19	15	of	of	ADP
xd07gq70365	19	16	this	this	DET
xd07gq70365	19	17	thesis	thesis	NOUN
xd07gq70365	19	18	for	for	ADP
xd07gq70365	19	19	future	future	ADJ
xd07gq70365	19	20	extension	extension	NOUN
xd07gq70365	19	21	and	and	CCONJ
xd07gq70365	19	22	development	development	NOUN
xd07gq70365	19	23	of	of	ADP
xd07gq70365	19	24	the	the	DET
xd07gq70365	19	25	model	model	NOUN
xd07gq70365	19	26	.	.	PUNCT
xd07gq70365	20	1	this	this	DET
xd07gq70365	20	2	work	work	NOUN
xd07gq70365	20	3	was	be	AUX
xd07gq70365	20	4	supported	support	VERB
xd07gq70365	20	5	in	in	ADP
xd07gq70365	20	6	part	part	NOUN
xd07gq70365	20	7	by	by	ADP
xd07gq70365	20	8	the	the	DET
xd07gq70365	20	9	national	national	PROPN
xd07gq70365	20	10	science	science	PROPN
xd07gq70365	20	11	foundation	foundation	PROPN
xd07gq70365	20	12	grant	grant	PROPN
xd07gq70365	20	13	cbet	cbet	PROPN
xd07gq70365	20	14	1403887	1403887	NUM
xd07gq70365	20	15	.	.	PUNCT