id sid tid token lemma pos tx31qf8854h 1 1 morphogenesis morphogenesis NOUN tx31qf8854h 1 2 governs govern VERB tx31qf8854h 1 3 the the DET tx31qf8854h 1 4 clustering clustering NOUN tx31qf8854h 1 5 and and CCONJ tx31qf8854h 1 6 pattern pattern NOUN tx31qf8854h 1 7 formation formation NOUN tx31qf8854h 1 8 of of ADP tx31qf8854h 1 9 embryonic embryonic ADJ tx31qf8854h 1 10 cells cell NOUN tx31qf8854h 1 11 into into ADP tx31qf8854h 1 12 bone bone NOUN tx31qf8854h 1 13 and and CCONJ tx31qf8854h 1 14 organs organ NOUN tx31qf8854h 1 15 . . PUNCT tx31qf8854h 2 1 many many ADJ tx31qf8854h 2 2 of of ADP tx31qf8854h 2 3 the the DET tx31qf8854h 2 4 patterning pattern VERB tx31qf8854h 2 5 instabilities instability NOUN tx31qf8854h 2 6 that that PRON tx31qf8854h 2 7 result result VERB tx31qf8854h 2 8 from from ADP tx31qf8854h 2 9 cell cell NOUN tx31qf8854h 2 10 interaction interaction NOUN tx31qf8854h 2 11 with with ADP tx31qf8854h 2 12 membrane membrane NOUN tx31qf8854h 2 13 bound bind VERB tx31qf8854h 2 14 chemicals chemical NOUN tx31qf8854h 2 15 can can AUX tx31qf8854h 2 16 be be AUX tx31qf8854h 2 17 described describe VERB tx31qf8854h 2 18 by by ADP tx31qf8854h 2 19 mathematical mathematical ADJ tx31qf8854h 2 20 models model NOUN tx31qf8854h 2 21 . . PUNCT tx31qf8854h 3 1 one one NUM tx31qf8854h 3 2 such such ADJ tx31qf8854h 3 3 known know VERB tx31qf8854h 3 4 model model NOUN tx31qf8854h 3 5 is be AUX tx31qf8854h 3 6 the the DET tx31qf8854h 3 7 cellular cellular ADJ tx31qf8854h 3 8 potts potts NOUN tx31qf8854h 3 9 model model NOUN tx31qf8854h 3 10 , , PUNCT tx31qf8854h 3 11 which which PRON tx31qf8854h 3 12 has have AUX tx31qf8854h 3 13 been be AUX tx31qf8854h 3 14 incorporated incorporate VERB tx31qf8854h 3 15 into into ADP tx31qf8854h 3 16 the the DET tx31qf8854h 3 17 three three NUM tx31qf8854h 3 18 - - PUNCT tx31qf8854h 3 19 dimensional dimensional ADJ tx31qf8854h 3 20 c++ c++ NOUN tx31qf8854h 3 21 framework framework NOUN tx31qf8854h 3 22 compucell3d compucell3d SPACE tx31qf8854h 3 23 . . PUNCT tx31qf8854h 3 24 compucell3d compucell3d PUNCT tx31qf8854h 3 25 uses use VERB tx31qf8854h 3 26 various various ADJ tx31qf8854h 3 27 design design NOUN tx31qf8854h 3 28 patterns pattern NOUN tx31qf8854h 3 29 to to PART tx31qf8854h 3 30 address address VERB tx31qf8854h 3 31 the the DET tx31qf8854h 3 32 issues issue NOUN tx31qf8854h 3 33 of of ADP tx31qf8854h 3 34 speed speed NOUN tx31qf8854h 3 35 , , PUNCT tx31qf8854h 3 36 flexibility flexibility NOUN tx31qf8854h 3 37 and and CCONJ tx31qf8854h 3 38 memory memory NOUN tx31qf8854h 3 39 consumption consumption NOUN tx31qf8854h 3 40 , , PUNCT tx31qf8854h 3 41 and and CCONJ tx31qf8854h 3 42 allow allow VERB tx31qf8854h 3 43 for for ADP tx31qf8854h 3 44 extensibility extensibility NOUN tx31qf8854h 3 45 of of ADP tx31qf8854h 3 46 the the DET tx31qf8854h 3 47 framework framework NOUN tx31qf8854h 3 48 through through ADP tx31qf8854h 3 49 dynamically dynamically ADV tx31qf8854h 3 50 loaded load VERB tx31qf8854h 3 51 plugin plugin NOUN tx31qf8854h 3 52 libraries library NOUN tx31qf8854h 3 53 . . PUNCT tx31qf8854h 4 1 biologo biologo PROPN tx31qf8854h 4 2 is be AUX tx31qf8854h 4 3 a a DET tx31qf8854h 4 4 domain domain NOUN tx31qf8854h 4 5 - - PUNCT tx31qf8854h 4 6 specific specific ADJ tx31qf8854h 4 7 language language NOUN tx31qf8854h 4 8 ( ( PUNCT tx31qf8854h 4 9 dsl dsl VERB tx31qf8854h 4 10 ) ) PUNCT tx31qf8854h 4 11 which which PRON tx31qf8854h 4 12 we we PRON tx31qf8854h 4 13 use use VERB tx31qf8854h 4 14 to to PART tx31qf8854h 4 15 provide provide VERB tx31qf8854h 4 16 a a DET tx31qf8854h 4 17 higher high ADJ tx31qf8854h 4 18 level level NOUN tx31qf8854h 4 19 of of ADP tx31qf8854h 4 20 abstraction abstraction NOUN tx31qf8854h 4 21 to to ADP tx31qf8854h 4 22 the the DET tx31qf8854h 4 23 framework framework NOUN tx31qf8854h 4 24 with with ADP tx31qf8854h 4 25 understandable understandable ADJ tx31qf8854h 4 26 syntax syntax NOUN tx31qf8854h 4 27 for for ADP tx31qf8854h 4 28 morphogenesis morphogenesis NOUN tx31qf8854h 4 29 researchers researcher NOUN tx31qf8854h 4 30 , , PUNCT tx31qf8854h 4 31 further far ADV tx31qf8854h 4 32 improving improve VERB tx31qf8854h 4 33 extensibility extensibility NOUN tx31qf8854h 4 34 of of ADP tx31qf8854h 4 35 the the DET tx31qf8854h 4 36 software software NOUN tx31qf8854h 4 37 . . PUNCT tx31qf8854h 5 1 finally finally ADV tx31qf8854h 5 2 , , PUNCT tx31qf8854h 5 3 we we PRON tx31qf8854h 5 4 validate validate VERB tx31qf8854h 5 5 biologo biologo NOUN tx31qf8854h 5 6 and and CCONJ tx31qf8854h 5 7 compucell3d compucell3d PRON tx31qf8854h 5 8 using use VERB tx31qf8854h 5 9 three three NUM tx31qf8854h 5 10 simulations simulation NOUN tx31qf8854h 5 11 representative representative ADJ tx31qf8854h 5 12 of of ADP tx31qf8854h 5 13 morphogenesis morphogenesis NOUN tx31qf8854h 5 14 modeling modeling NOUN tx31qf8854h 5 15 . . PUNCT