id	sid	tid	token	lemma	pos
pn89d50796z	1	1	my	my	PRON
pn89d50796z	1	2	work	work	NOUN
pn89d50796z	1	3	in	in	ADP
pn89d50796z	1	4	this	this	DET
pn89d50796z	1	5	thesis	thesis	NOUN
pn89d50796z	1	6	is	be	AUX
pn89d50796z	1	7	concerning	concern	VERB
pn89d50796z	1	8	methods	method	NOUN
pn89d50796z	1	9	for	for	ADP
pn89d50796z	1	10	robust	robust	ADJ
pn89d50796z	1	11	inference	inference	NOUN
pn89d50796z	1	12	and	and	CCONJ
pn89d50796z	1	13	network	network	NOUN
pn89d50796z	1	14	analysis	analysis	NOUN
pn89d50796z	1	15	for	for	ADP
pn89d50796z	1	16	non	non	ADJ
pn89d50796z	1	17	-	-	ADJ
pn89d50796z	1	18	gaussian	gaussian	ADJ
pn89d50796z	1	19	data	datum	NOUN
pn89d50796z	1	20	,	,	PUNCT
pn89d50796z	1	21	with	with	ADP
pn89d50796z	1	22	a	a	DET
pn89d50796z	1	23	focus	focus	NOUN
pn89d50796z	1	24	on	on	ADP
pn89d50796z	1	25	the	the	DET
pn89d50796z	1	26	unique	unique	ADJ
pn89d50796z	1	27	challenges	challenge	NOUN
pn89d50796z	1	28	presented	present	VERB
pn89d50796z	1	29	by	by	ADP
pn89d50796z	1	30	rna	rna	PROPN
pn89d50796z	1	31	-	-	PUNCT
pn89d50796z	1	32	sequencing	sequence	VERB
pn89d50796z	1	33	and	and	CCONJ
pn89d50796z	1	34	single	single	ADJ
pn89d50796z	1	35	-	-	PUNCT
pn89d50796z	1	36	cell	cell	NOUN
pn89d50796z	1	37	rna	rna	NOUN
pn89d50796z	1	38	-	-	PUNCT
pn89d50796z	1	39	sequencing	sequence	VERB
pn89d50796z	1	40	applications	application	NOUN
pn89d50796z	1	41	.	.	PUNCT
pn89d50796z	2	1	two	two	NUM
pn89d50796z	2	2	methods	method	NOUN
pn89d50796z	2	3	for	for	ADP
pn89d50796z	2	4	constructing	construct	VERB
pn89d50796z	2	5	gene	gene	NOUN
pn89d50796z	2	6	coexpression	coexpression	NOUN
pn89d50796z	2	7	networks	network	NOUN
pn89d50796z	2	8	are	be	AUX
pn89d50796z	2	9	presented	present	VERB
pn89d50796z	2	10	---	---	PUNCT
pn89d50796z	2	11	a	a	DET
pn89d50796z	2	12	robust	robust	ADJ
pn89d50796z	2	13	method	method	NOUN
pn89d50796z	2	14	for	for	ADP
pn89d50796z	2	15	rna	rna	PROPN
pn89d50796z	2	16	-	-	PUNCT
pn89d50796z	2	17	seq	seq	PROPN
pn89d50796z	2	18	data	datum	NOUN
pn89d50796z	2	19	,	,	PUNCT
pn89d50796z	2	20	and	and	CCONJ
pn89d50796z	2	21	a	a	DET
pn89d50796z	2	22	method	method	NOUN
pn89d50796z	2	23	for	for	ADP
pn89d50796z	2	24	estimating	estimate	VERB
pn89d50796z	2	25	directed	direct	VERB
pn89d50796z	2	26	networks	network	NOUN
pn89d50796z	2	27	from	from	ADP
pn89d50796z	2	28	scrna	scrna	PROPN
pn89d50796z	2	29	-	-	PUNCT
pn89d50796z	2	30	seq	seq	PROPN
pn89d50796z	2	31	data	datum	NOUN
pn89d50796z	2	32	---	---	PUNCT
pn89d50796z	2	33	as	as	ADV
pn89d50796z	2	34	well	well	ADV
pn89d50796z	2	35	as	as	ADP
pn89d50796z	2	36	a	a	DET
pn89d50796z	2	37	novel	novel	ADJ
pn89d50796z	2	38	method	method	NOUN
pn89d50796z	2	39	for	for	ADP
pn89d50796z	2	40	testing	test	VERB
pn89d50796z	2	41	differences	difference	NOUN
pn89d50796z	2	42	in	in	ADP
pn89d50796z	2	43	gene	gene	NOUN
pn89d50796z	2	44	expression.the	expression.the	DET
pn89d50796z	2	45	first	first	ADJ
pn89d50796z	2	46	proposed	propose	VERB
pn89d50796z	2	47	method	method	NOUN
pn89d50796z	2	48	provides	provide	VERB
pn89d50796z	2	49	a	a	DET
pn89d50796z	2	50	new	new	ADJ
pn89d50796z	2	51	way	way	NOUN
pn89d50796z	2	52	of	of	ADP
pn89d50796z	2	53	estimating	estimate	VERB
pn89d50796z	2	54	the	the	DET
pn89d50796z	2	55	correlation	correlation	NOUN
pn89d50796z	2	56	of	of	ADP
pn89d50796z	2	57	non	non	ADJ
pn89d50796z	2	58	-	-	ADJ
pn89d50796z	2	59	gaussian	gaussian	ADJ
pn89d50796z	2	60	data	datum	NOUN
pn89d50796z	2	61	,	,	PUNCT
pn89d50796z	2	62	which	which	PRON
pn89d50796z	2	63	in	in	ADP
pn89d50796z	2	64	turn	turn	NOUN
pn89d50796z	2	65	can	can	AUX
pn89d50796z	2	66	be	be	AUX
pn89d50796z	2	67	used	use	VERB
pn89d50796z	2	68	to	to	PART
pn89d50796z	2	69	infer	infer	VERB
pn89d50796z	2	70	gene	gene	NOUN
pn89d50796z	2	71	function	function	NOUN
pn89d50796z	2	72	.	.	PUNCT
pn89d50796z	3	1	the	the	DET
pn89d50796z	3	2	most	most	ADV
pn89d50796z	3	3	straightforward	straightforward	ADJ
pn89d50796z	3	4	way	way	NOUN
pn89d50796z	3	5	of	of	ADP
pn89d50796z	3	6	constructing	construct	VERB
pn89d50796z	3	7	a	a	DET
pn89d50796z	3	8	coexpression	coexpression	NOUN
pn89d50796z	3	9	network	network	NOUN
pn89d50796z	3	10	is	be	AUX
pn89d50796z	3	11	to	to	PART
pn89d50796z	3	12	connect	connect	VERB
pn89d50796z	3	13	gene	gene	NOUN
pn89d50796z	3	14	pairs	pair	NOUN
pn89d50796z	3	15	whose	whose	DET
pn89d50796z	3	16	expressions	expression	NOUN
pn89d50796z	3	17	are	be	AUX
pn89d50796z	3	18	highly	highly	ADV
pn89d50796z	3	19	correlated	correlate	VERB
pn89d50796z	3	20	under	under	ADP
pn89d50796z	3	21	different	different	ADJ
pn89d50796z	3	22	experimental	experimental	ADJ
pn89d50796z	3	23	conditions	condition	NOUN
pn89d50796z	3	24	.	.	PUNCT
pn89d50796z	4	1	usually	usually	ADV
pn89d50796z	4	2	,	,	PUNCT
pn89d50796z	4	3	this	this	DET
pn89d50796z	4	4	correlation	correlation	NOUN
pn89d50796z	4	5	is	be	AUX
pn89d50796z	4	6	measured	measure	VERB
pn89d50796z	4	7	by	by	ADP
pn89d50796z	4	8	the	the	DET
pn89d50796z	4	9	pearson	pearson	NOUN
pn89d50796z	4	10	's	's	PART
pn89d50796z	4	11	correlation	correlation	NOUN
pn89d50796z	4	12	coefficient	coefficient	NOUN
pn89d50796z	4	13	,	,	PUNCT
pn89d50796z	4	14	which	which	PRON
pn89d50796z	4	15	,	,	PUNCT
pn89d50796z	4	16	however	however	ADV
pn89d50796z	4	17	,	,	PUNCT
pn89d50796z	4	18	does	do	AUX
pn89d50796z	4	19	not	not	PART
pn89d50796z	4	20	directly	directly	ADV
pn89d50796z	4	21	apply	apply	VERB
pn89d50796z	4	22	to	to	ADP
pn89d50796z	4	23	data	datum	NOUN
pn89d50796z	4	24	generated	generate	VERB
pn89d50796z	4	25	from	from	ADP
pn89d50796z	4	26	rna	rna	PROPN
pn89d50796z	4	27	-	-	PUNCT
pn89d50796z	4	28	seq	seq	PROPN
pn89d50796z	4	29	technique	technique	NOUN
pn89d50796z	4	30	.	.	PUNCT
pn89d50796z	5	1	rna	rna	PROPN
pn89d50796z	5	2	-	-	PUNCT
pn89d50796z	5	3	seq	seq	PROPN
pn89d50796z	5	4	data	datum	NOUN
pn89d50796z	5	5	are	be	AUX
pn89d50796z	5	6	non	non	ADJ
pn89d50796z	5	7	-	-	ADJ
pn89d50796z	5	8	negative	negative	ADJ
pn89d50796z	5	9	integers	integer	NOUN
pn89d50796z	5	10	which	which	PRON
pn89d50796z	5	11	can	can	AUX
pn89d50796z	5	12	not	not	PART
pn89d50796z	5	13	be	be	AUX
pn89d50796z	5	14	properly	properly	ADV
pn89d50796z	5	15	modeled	model	VERB
pn89d50796z	5	16	by	by	ADP
pn89d50796z	5	17	a	a	DET
pn89d50796z	5	18	gaussian	gaussian	ADJ
pn89d50796z	5	19	distribution	distribution	NOUN
pn89d50796z	5	20	,	,	PUNCT
pn89d50796z	5	21	and	and	CCONJ
pn89d50796z	5	22	moreover	moreover	ADV
pn89d50796z	5	23	,	,	PUNCT
pn89d50796z	5	24	these	these	DET
pn89d50796z	5	25	counts	count	NOUN
pn89d50796z	5	26	have	have	VERB
pn89d50796z	5	27	mean	mean	ADJ
pn89d50796z	5	28	values	value	NOUN
pn89d50796z	5	29	that	that	PRON
pn89d50796z	5	30	are	be	AUX
pn89d50796z	5	31	proportional	proportional	ADJ
pn89d50796z	5	32	to	to	ADP
pn89d50796z	5	33	the	the	DET
pn89d50796z	5	34	sequencing	sequence	VERB
pn89d50796z	5	35	depths	depth	NOUN
pn89d50796z	5	36	,	,	PUNCT
pn89d50796z	5	37	and	and	CCONJ
pn89d50796z	5	38	thus	thus	ADV
pn89d50796z	5	39	there	there	PRON
pn89d50796z	5	40	are	be	VERB
pn89d50796z	5	41	no	no	DET
pn89d50796z	5	42	identically	identically	ADV
pn89d50796z	5	43	distributed	distribute	VERB
pn89d50796z	5	44	"	"	PUNCT
pn89d50796z	5	45	replicates	replicate	NOUN
pn89d50796z	5	46	.	.	PUNCT
pn89d50796z	5	47	"	"	PUNCT
pn89d50796z	6	1	directly	directly	ADV
pn89d50796z	6	2	normalizing	normalize	VERB
pn89d50796z	6	3	counts	count	NOUN
pn89d50796z	6	4	by	by	ADP
pn89d50796z	6	5	the	the	DET
pn89d50796z	6	6	corresponding	correspond	VERB
pn89d50796z	6	7	sequencing	sequence	VERB
pn89d50796z	6	8	depths	depth	NOUN
pn89d50796z	6	9	and	and	CCONJ
pn89d50796z	6	10	then	then	ADV
pn89d50796z	6	11	using	use	VERB
pn89d50796z	6	12	pearson	pearson	NOUN
pn89d50796z	6	13	's	's	PART
pn89d50796z	6	14	correlation	correlation	NOUN
pn89d50796z	6	15	coefficient	coefficient	NOUN
pn89d50796z	6	16	can	can	AUX
pn89d50796z	6	17	be	be	AUX
pn89d50796z	6	18	of	of	ADP
pn89d50796z	6	19	low	low	ADJ
pn89d50796z	6	20	efficiency	efficiency	NOUN
pn89d50796z	6	21	.	.	PUNCT
pn89d50796z	7	1	the	the	DET
pn89d50796z	7	2	proposed	propose	VERB
pn89d50796z	7	3	method	method	NOUN
pn89d50796z	7	4	,	,	PUNCT
pn89d50796z	7	5	icc	icc	NOUN
pn89d50796z	7	6	,	,	PUNCT
pn89d50796z	7	7	is	be	AUX
pn89d50796z	7	8	a	a	DET
pn89d50796z	7	9	generalization	generalization	NOUN
pn89d50796z	7	10	of	of	ADP
pn89d50796z	7	11	the	the	DET
pn89d50796z	7	12	pearson	pearson	NOUN
pn89d50796z	7	13	's	's	PART
pn89d50796z	7	14	correlation	correlation	NOUN
pn89d50796z	7	15	coefficient	coefficient	NOUN
pn89d50796z	7	16	that	that	PRON
pn89d50796z	7	17	can	can	AUX
pn89d50796z	7	18	be	be	AUX
pn89d50796z	7	19	directly	directly	ADV
pn89d50796z	7	20	applied	apply	VERB
pn89d50796z	7	21	to	to	ADP
pn89d50796z	7	22	rna	rna	PROPN
pn89d50796z	7	23	-	-	PUNCT
pn89d50796z	7	24	seq	seq	PROPN
pn89d50796z	7	25	data	datum	NOUN
pn89d50796z	7	26	.	.	PUNCT
pn89d50796z	8	1	on	on	ADP
pn89d50796z	8	2	simulation	simulation	NOUN
pn89d50796z	8	3	data	datum	NOUN
pn89d50796z	8	4	,	,	PUNCT
pn89d50796z	8	5	it	it	PRON
pn89d50796z	8	6	shows	show	VERB
pn89d50796z	8	7	higher	high	ADJ
pn89d50796z	8	8	efficiency	efficiency	NOUN
pn89d50796z	8	9	in	in	ADP
pn89d50796z	8	10	distinguishing	distinguish	VERB
pn89d50796z	8	11	coexpressed	coexpresse	VERB
pn89d50796z	8	12	gene	gene	NOUN
pn89d50796z	8	13	pairs	pair	NOUN
pn89d50796z	8	14	from	from	ADP
pn89d50796z	8	15	unrelated	unrelated	ADJ
pn89d50796z	8	16	gene	gene	NOUN
pn89d50796z	8	17	pairs	pair	NOUN
pn89d50796z	8	18	.	.	PUNCT
pn89d50796z	9	1	in	in	ADP
pn89d50796z	9	2	a	a	DET
pn89d50796z	9	3	real	real	ADJ
pn89d50796z	9	4	dataset	dataset	NOUN
pn89d50796z	9	5	,	,	PUNCT
pn89d50796z	9	6	icc	icc	NOUN
pn89d50796z	9	7	generates	generate	VERB
pn89d50796z	9	8	a	a	DET
pn89d50796z	9	9	coexpression	coexpression	NOUN
pn89d50796z	9	10	network	network	NOUN
pn89d50796z	9	11	that	that	PRON
pn89d50796z	9	12	appears	appear	VERB
pn89d50796z	9	13	to	to	PART
pn89d50796z	9	14	more	more	ADV
pn89d50796z	9	15	closely	closely	ADV
pn89d50796z	9	16	agree	agree	VERB
pn89d50796z	9	17	with	with	ADP
pn89d50796z	9	18	experimentally	experimentally	ADV
pn89d50796z	9	19	validated	validate	VERB
pn89d50796z	9	20	networks	network	NOUN
pn89d50796z	9	21	than	than	ADP
pn89d50796z	9	22	other	other	ADJ
pn89d50796z	9	23	methods	method	NOUN
pn89d50796z	9	24	.	.	PUNCT
pn89d50796z	10	1	more	more	ADV
pn89d50796z	10	2	generally	generally	ADV
pn89d50796z	10	3	,	,	PUNCT
pn89d50796z	10	4	icc	icc	NOUN
pn89d50796z	10	5	can	can	AUX
pn89d50796z	10	6	be	be	AUX
pn89d50796z	10	7	used	use	VERB
pn89d50796z	10	8	for	for	ADP
pn89d50796z	10	9	calculating	calculate	VERB
pn89d50796z	10	10	the	the	DET
pn89d50796z	10	11	correlation	correlation	NOUN
pn89d50796z	10	12	coefficient	coefficient	NOUN
pn89d50796z	10	13	for	for	ADP
pn89d50796z	10	14	any	any	DET
pn89d50796z	10	15	two	two	NUM
pn89d50796z	10	16	series	series	NOUN
pn89d50796z	10	17	of	of	ADP
pn89d50796z	10	18	random	random	ADJ
pn89d50796z	10	19	variables.the	variables.the	DET
pn89d50796z	10	20	second	second	ADJ
pn89d50796z	10	21	proposed	propose	VERB
pn89d50796z	10	22	method	method	NOUN
pn89d50796z	10	23	is	be	AUX
pn89d50796z	10	24	for	for	ADP
pn89d50796z	10	25	constructing	construct	VERB
pn89d50796z	10	26	gene	gene	NOUN
pn89d50796z	10	27	co	co	NOUN
pn89d50796z	10	28	-	-	ADJ
pn89d50796z	10	29	expression	expression	ADJ
pn89d50796z	10	30	networks	network	NOUN
pn89d50796z	10	31	based	base	VERB
pn89d50796z	10	32	on	on	ADP
pn89d50796z	10	33	single	single	ADJ
pn89d50796z	10	34	-	-	PUNCT
pn89d50796z	10	35	cell	cell	NOUN
pn89d50796z	10	36	rna	rna	NOUN
pn89d50796z	10	37	-	-	PUNCT
pn89d50796z	10	38	sequencing	sequence	VERB
pn89d50796z	10	39	data	datum	NOUN
pn89d50796z	10	40	.	.	PUNCT
pn89d50796z	11	1	the	the	DET
pn89d50796z	11	2	algorithm	algorithm	PROPN
pn89d50796z	11	3	is	be	AUX
pn89d50796z	11	4	called	call	VERB
pn89d50796z	11	5	leap	leap	PROPN
pn89d50796z	11	6	,	,	PUNCT
pn89d50796z	11	7	or	or	CCONJ
pn89d50796z	11	8	lag	lag	NOUN
pn89d50796z	11	9	-	-	PUNCT
pn89d50796z	11	10	based	base	VERB
pn89d50796z	11	11	expression	expression	NOUN
pn89d50796z	11	12	associations	association	NOUN
pn89d50796z	11	13	for	for	ADP
pn89d50796z	11	14	pseudotime	pseudotime	ADJ
pn89d50796z	11	15	-	-	PUNCT
pn89d50796z	11	16	series	series	NOUN
pn89d50796z	11	17	data	datum	NOUN
pn89d50796z	11	18	,	,	PUNCT
pn89d50796z	11	19	and	and	CCONJ
pn89d50796z	11	20	utilizes	utilize	VERB
pn89d50796z	11	21	the	the	DET
pn89d50796z	11	22	estimated	estimate	VERB
pn89d50796z	11	23	pseudotime	pseudotime	NOUN
pn89d50796z	11	24	of	of	ADP
pn89d50796z	11	25	the	the	DET
pn89d50796z	11	26	cells	cell	NOUN
pn89d50796z	11	27	to	to	PART
pn89d50796z	11	28	find	find	VERB
pn89d50796z	11	29	gene	gene	NOUN
pn89d50796z	11	30	co	co	NOUN
pn89d50796z	11	31	-	-	NOUN
pn89d50796z	11	32	expression	expression	NOUN
pn89d50796z	11	33	that	that	PRON
pn89d50796z	11	34	involves	involve	VERB
pn89d50796z	11	35	time	time	NOUN
pn89d50796z	11	36	delay	delay	NOUN
pn89d50796z	11	37	,	,	PUNCT
pn89d50796z	11	38	building	build	VERB
pn89d50796z	11	39	off	off	ADP
pn89d50796z	11	40	of	of	ADP
pn89d50796z	11	41	traditional	traditional	ADJ
pn89d50796z	11	42	time	time	NOUN
pn89d50796z	11	43	-	-	PUNCT
pn89d50796z	11	44	series	series	NOUN
pn89d50796z	11	45	analysis	analysis	NOUN
pn89d50796z	11	46	techniques	technique	NOUN
pn89d50796z	11	47	.	.	PUNCT
pn89d50796z	12	1	regular	regular	ADJ
pn89d50796z	12	2	correlation	correlation	NOUN
pn89d50796z	12	3	-	-	PUNCT
pn89d50796z	12	4	based	base	VERB
pn89d50796z	12	5	gcns	gcns	PROPN
pn89d50796z	12	6	only	only	ADV
pn89d50796z	12	7	describe	describe	VERB
pn89d50796z	12	8	simultaneous	simultaneous	ADJ
pn89d50796z	12	9	gene	gene	NOUN
pn89d50796z	12	10	co	co	NOUN
pn89d50796z	12	11	-	-	NOUN
pn89d50796z	12	12	expressions	expression	NOUN
pn89d50796z	12	13	.	.	PUNCT
pn89d50796z	13	1	by	by	ADP
pn89d50796z	13	2	using	use	VERB
pn89d50796z	13	3	the	the	DET
pn89d50796z	13	4	time	time	NOUN
pn89d50796z	13	5	information	information	NOUN
pn89d50796z	13	6	that	that	PRON
pn89d50796z	13	7	is	be	AUX
pn89d50796z	13	8	virtually	virtually	ADV
pn89d50796z	13	9	freely	freely	ADV
pn89d50796z	13	10	available	available	ADJ
pn89d50796z	13	11	in	in	ADP
pn89d50796z	13	12	scrna	scrna	PROPN
pn89d50796z	13	13	-	-	PUNCT
pn89d50796z	13	14	seq	seq	PROPN
pn89d50796z	13	15	data	datum	NOUN
pn89d50796z	13	16	,	,	PUNCT
pn89d50796z	13	17	leap	leap	PROPN
pn89d50796z	13	18	is	be	AUX
pn89d50796z	13	19	able	able	ADJ
pn89d50796z	13	20	to	to	PART
pn89d50796z	13	21	capture	capture	VERB
pn89d50796z	13	22	associations	association	NOUN
pn89d50796z	13	23	that	that	PRON
pn89d50796z	13	24	were	be	AUX
pn89d50796z	13	25	hidden	hide	VERB
pn89d50796z	13	26	by	by	ADP
pn89d50796z	13	27	the	the	DET
pn89d50796z	13	28	time	time	NOUN
pn89d50796z	13	29	lags	lag	NOUN
pn89d50796z	13	30	.	.	PUNCT
pn89d50796z	14	1	the	the	DET
pn89d50796z	14	2	asymmetric	asymmetric	ADJ
pn89d50796z	14	3	associations	association	NOUN
pn89d50796z	14	4	detected	detect	VERB
pn89d50796z	14	5	by	by	ADP
pn89d50796z	14	6	leap	leap	NOUN
pn89d50796z	14	7	more	more	ADV
pn89d50796z	14	8	likely	likely	ADV
pn89d50796z	14	9	reflect	reflect	VERB
pn89d50796z	14	10	regulatory	regulatory	ADJ
pn89d50796z	14	11	relationships	relationship	NOUN
pn89d50796z	14	12	as	as	SCONJ
pn89d50796z	14	13	they	they	PRON
pn89d50796z	14	14	describe	describe	VERB
pn89d50796z	14	15	which	which	DET
pn89d50796z	14	16	gene	gene	NOUN
pn89d50796z	14	17	follows	follow	VERB
pn89d50796z	14	18	another	another	DET
pn89d50796z	14	19	gene	gene	NOUN
pn89d50796z	14	20	in	in	ADP
pn89d50796z	14	21	expression	expression	NOUN
pn89d50796z	14	22	.	.	PUNCT
pn89d50796z	15	1	applied	apply	VERB
pn89d50796z	15	2	to	to	ADP
pn89d50796z	15	3	a	a	DET
pn89d50796z	15	4	real	real	ADJ
pn89d50796z	15	5	data	data	NOUN
pn89d50796z	15	6	set	set	NOUN
pn89d50796z	15	7	,	,	PUNCT
pn89d50796z	15	8	leap	leap	PROPN
pn89d50796z	15	9	not	not	PART
pn89d50796z	15	10	only	only	ADV
pn89d50796z	15	11	identifies	identify	VERB
pn89d50796z	15	12	more	more	ADJ
pn89d50796z	15	13	true	true	ADJ
pn89d50796z	15	14	relationships	relationship	NOUN
pn89d50796z	15	15	than	than	ADP
pn89d50796z	15	16	a	a	DET
pn89d50796z	15	17	traditional	traditional	ADJ
pn89d50796z	15	18	correlation	correlation	NOUN
pn89d50796z	15	19	-	-	PUNCT
pn89d50796z	15	20	based	base	VERB
pn89d50796z	15	21	network	network	NOUN
pn89d50796z	15	22	,	,	PUNCT
pn89d50796z	15	23	but	but	CCONJ
pn89d50796z	15	24	also	also	ADV
pn89d50796z	15	25	captures	capture	VERB
pn89d50796z	15	26	directed	direct	VERB
pn89d50796z	15	27	,	,	PUNCT
pn89d50796z	15	28	and	and	CCONJ
pn89d50796z	15	29	thereby	thereby	ADV
pn89d50796z	15	30	regulatory	regulatory	ADJ
pn89d50796z	15	31	,	,	PUNCT
pn89d50796z	15	32	relationships.finally	relationships.finally	PROPN
pn89d50796z	15	33	,	,	PUNCT
pn89d50796z	15	34	the	the	DET
pn89d50796z	15	35	third	third	ADJ
pn89d50796z	15	36	method	method	NOUN
pn89d50796z	15	37	is	be	AUX
pn89d50796z	15	38	a	a	DET
pn89d50796z	15	39	new	new	ADJ
pn89d50796z	15	40	way	way	NOUN
pn89d50796z	15	41	of	of	ADP
pn89d50796z	15	42	detecting	detect	VERB
pn89d50796z	15	43	differentially	differentially	ADV
pn89d50796z	15	44	expressed	express	VERB
pn89d50796z	15	45	(	(	PUNCT
pn89d50796z	15	46	de	de	ADJ
pn89d50796z	15	47	)	)	PUNCT
pn89d50796z	15	48	genes	gene	NOUN
pn89d50796z	15	49	,	,	PUNCT
pn89d50796z	15	50	which	which	PRON
pn89d50796z	15	51	show	show	VERB
pn89d50796z	15	52	different	different	ADJ
pn89d50796z	15	53	average	average	ADJ
pn89d50796z	15	54	expression	expression	NOUN
pn89d50796z	15	55	levels	level	NOUN
pn89d50796z	15	56	in	in	ADP
pn89d50796z	15	57	different	different	ADJ
pn89d50796z	15	58	sample	sample	NOUN
pn89d50796z	15	59	groups	group	NOUN
pn89d50796z	15	60	,	,	PUNCT
pn89d50796z	15	61	and	and	CCONJ
pn89d50796z	15	62	thus	thus	ADV
pn89d50796z	15	63	can	can	AUX
pn89d50796z	15	64	be	be	AUX
pn89d50796z	15	65	important	important	ADJ
pn89d50796z	15	66	biological	biological	ADJ
pn89d50796z	15	67	markers	marker	NOUN
pn89d50796z	15	68	.	.	PUNCT
pn89d50796z	16	1	while	while	SCONJ
pn89d50796z	16	2	many	many	ADJ
pn89d50796z	16	3	methods	method	NOUN
pn89d50796z	16	4	have	have	AUX
pn89d50796z	16	5	been	be	AUX
pn89d50796z	16	6	proposed	propose	VERB
pn89d50796z	16	7	for	for	ADP
pn89d50796z	16	8	detecting	detect	VERB
pn89d50796z	16	9	de	de	X
pn89d50796z	16	10	genes	gene	NOUN
pn89d50796z	16	11	,	,	PUNCT
pn89d50796z	16	12	and	and	CCONJ
pn89d50796z	16	13	are	be	AUX
pn89d50796z	16	14	generally	generally	ADV
pn89d50796z	16	15	very	very	ADV
pn89d50796z	16	16	successful	successful	ADJ
pn89d50796z	16	17	,	,	PUNCT
pn89d50796z	16	18	these	these	DET
pn89d50796z	16	19	methods	method	NOUN
pn89d50796z	16	20	need	need	VERB
pn89d50796z	16	21	to	to	PART
pn89d50796z	16	22	be	be	AUX
pn89d50796z	16	23	further	far	ADV
pn89d50796z	16	24	tailored	tailor	VERB
pn89d50796z	16	25	and	and	CCONJ
pn89d50796z	16	26	improved	improve	VERB
pn89d50796z	16	27	for	for	ADP
pn89d50796z	16	28	cancerous	cancerous	ADJ
pn89d50796z	16	29	data	datum	NOUN
pn89d50796z	16	30	.	.	PUNCT
pn89d50796z	17	1	tumor	tumor	NOUN
pn89d50796z	17	2	samples	sample	NOUN
pn89d50796z	17	3	often	often	ADV
pn89d50796z	17	4	feature	feature	VERB
pn89d50796z	17	5	quite	quite	ADV
pn89d50796z	17	6	diverse	diverse	ADJ
pn89d50796z	17	7	expression	expression	NOUN
pn89d50796z	17	8	---	---	PUNCT
pn89d50796z	17	9	some	some	PRON
pn89d50796z	17	10	even	even	ADV
pn89d50796z	17	11	appear	appear	VERB
pn89d50796z	17	12	as	as	ADP
pn89d50796z	17	13	huge	huge	ADJ
pn89d50796z	17	14	outliers	outlier	NOUN
pn89d50796z	17	15	---	---	PUNCT
pn89d50796z	17	16	and	and	CCONJ
pn89d50796z	17	17	this	this	DET
pn89d50796z	17	18	diversity	diversity	NOUN
pn89d50796z	17	19	is	be	AUX
pn89d50796z	17	20	much	much	ADV
pn89d50796z	17	21	larger	large	ADJ
pn89d50796z	17	22	than	than	ADP
pn89d50796z	17	23	that	that	PRON
pn89d50796z	17	24	in	in	ADP
pn89d50796z	17	25	the	the	DET
pn89d50796z	17	26	control	control	NOUN
pn89d50796z	17	27	group	group	NOUN
pn89d50796z	17	28	.	.	PUNCT
pn89d50796z	18	1	the	the	DET
pn89d50796z	18	2	proposed	propose	VERB
pn89d50796z	18	3	method	method	NOUN
pn89d50796z	18	4	,	,	PUNCT
pn89d50796z	18	5	diphiseq	diphiseq	PROPN
pn89d50796z	18	6	,	,	PUNCT
pn89d50796z	18	7	can	can	AUX
pn89d50796z	18	8	detect	detect	VERB
pn89d50796z	18	9	not	not	PART
pn89d50796z	18	10	only	only	ADV
pn89d50796z	18	11	genes	gene	NOUN
pn89d50796z	18	12	that	that	PRON
pn89d50796z	18	13	show	show	VERB
pn89d50796z	18	14	different	different	ADJ
pn89d50796z	18	15	average	average	ADJ
pn89d50796z	18	16	expressions	expression	NOUN
pn89d50796z	18	17	,	,	PUNCT
pn89d50796z	18	18	but	but	CCONJ
pn89d50796z	18	19	also	also	ADV
pn89d50796z	18	20	genes	gene	NOUN
pn89d50796z	18	21	that	that	PRON
pn89d50796z	18	22	show	show	VERB
pn89d50796z	18	23	different	different	ADJ
pn89d50796z	18	24	diversities	diversity	NOUN
pn89d50796z	18	25	of	of	ADP
pn89d50796z	18	26	expressions	expression	NOUN
pn89d50796z	18	27	in	in	ADP
pn89d50796z	18	28	different	different	ADJ
pn89d50796z	18	29	groups	group	NOUN
pn89d50796z	18	30	.	.	PUNCT
pn89d50796z	19	1	these	these	DET
pn89d50796z	19	2	"	"	PUNCT
pn89d50796z	19	3	differentially	differentially	ADV
pn89d50796z	19	4	dispersed	disperse	VERB
pn89d50796z	19	5	"	"	PUNCT
pn89d50796z	19	6	genes	gene	NOUN
pn89d50796z	19	7	can	can	AUX
pn89d50796z	19	8	be	be	AUX
pn89d50796z	19	9	important	important	ADJ
pn89d50796z	19	10	clinical	clinical	ADJ
pn89d50796z	19	11	markers	marker	NOUN
pn89d50796z	19	12	.	.	PUNCT
pn89d50796z	20	1	diphiseq	diphiseq	NOUN
pn89d50796z	20	2	uses	use	VERB
pn89d50796z	20	3	a	a	DET
pn89d50796z	20	4	redescending	redescende	VERB
pn89d50796z	20	5	penalty	penalty	NOUN
pn89d50796z	20	6	on	on	ADP
pn89d50796z	20	7	the	the	DET
pn89d50796z	20	8	quasi	quasi	ADJ
pn89d50796z	20	9	-	-	ADJ
pn89d50796z	20	10	likelihood	likelihood	ADJ
pn89d50796z	20	11	function	function	NOUN
pn89d50796z	20	12	,	,	PUNCT
pn89d50796z	20	13	and	and	CCONJ
pn89d50796z	20	14	thus	thus	ADV
pn89d50796z	20	15	has	have	VERB
pn89d50796z	20	16	superior	superior	ADJ
pn89d50796z	20	17	robustness	robustness	NOUN
pn89d50796z	20	18	against	against	ADP
pn89d50796z	20	19	outliers	outlier	NOUN
pn89d50796z	20	20	and	and	CCONJ
pn89d50796z	20	21	other	other	ADJ
pn89d50796z	20	22	noise	noise	NOUN
pn89d50796z	20	23	.	.	PUNCT
pn89d50796z	21	1	simulations	simulation	NOUN
pn89d50796z	21	2	and	and	CCONJ
pn89d50796z	21	3	real	real	ADJ
pn89d50796z	21	4	data	datum	NOUN
pn89d50796z	21	5	analysis	analysis	NOUN
pn89d50796z	21	6	demonstrate	demonstrate	VERB
pn89d50796z	21	7	that	that	SCONJ
pn89d50796z	21	8	diphiseq	diphiseq	NOUN
pn89d50796z	21	9	outperforms	outperform	VERB
pn89d50796z	21	10	existing	exist	VERB
pn89d50796z	21	11	methods	method	NOUN
pn89d50796z	21	12	in	in	ADP
pn89d50796z	21	13	the	the	DET
pn89d50796z	21	14	presence	presence	NOUN
pn89d50796z	21	15	of	of	ADP
pn89d50796z	21	16	outliers	outlier	NOUN
pn89d50796z	21	17	,	,	PUNCT
pn89d50796z	21	18	and	and	CCONJ
pn89d50796z	21	19	identifies	identify	VERB
pn89d50796z	21	20	unique	unique	ADJ
pn89d50796z	21	21	sets	set	NOUN
pn89d50796z	21	22	of	of	ADP
pn89d50796z	21	23	genes	gene	NOUN
pn89d50796z	21	24	.	.	PUNCT