id	sid	tid	token	lemma	pos
2514nk33w4v	1	1	transcriptome	transcriptome	ADJ
2514nk33w4v	1	2	sequencing	sequencing	NOUN
2514nk33w4v	1	3	(	(	PUNCT
2514nk33w4v	1	4	sequencing	sequence	VERB
2514nk33w4v	1	5	only	only	ADV
2514nk33w4v	1	6	from	from	ADP
2514nk33w4v	1	7	the	the	DET
2514nk33w4v	1	8	protein	protein	NOUN
2514nk33w4v	1	9	coding	code	VERB
2514nk33w4v	1	10	genes	gene	NOUN
2514nk33w4v	1	11	of	of	ADP
2514nk33w4v	1	12	a	a	DET
2514nk33w4v	1	13	genome	genome	NOUN
2514nk33w4v	1	14	)	)	PUNCT
2514nk33w4v	1	15	has	have	AUX
2514nk33w4v	1	16	multiplied	multiply	VERB
2514nk33w4v	1	17	our	our	PRON
2514nk33w4v	1	18	ability	ability	NOUN
2514nk33w4v	1	19	to	to	PART
2514nk33w4v	1	20	understand	understand	VERB
2514nk33w4v	1	21	the	the	DET
2514nk33w4v	1	22	biology	biology	NOUN
2514nk33w4v	1	23	of	of	ADP
2514nk33w4v	1	24	life	life	NOUN
2514nk33w4v	1	25	on	on	ADP
2514nk33w4v	1	26	earth	earth	NOUN
2514nk33w4v	1	27	.	.	PUNCT
2514nk33w4v	2	1	while	while	SCONJ
2514nk33w4v	2	2	full	full	ADJ
2514nk33w4v	2	3	genome	genome	NOUN
2514nk33w4v	2	4	sequencing	sequence	VERB
2514nk33w4v	2	5	is	be	AUX
2514nk33w4v	2	6	still	still	ADV
2514nk33w4v	2	7	prohibitively	prohibitively	ADV
2514nk33w4v	2	8	expensive	expensive	ADJ
2514nk33w4v	2	9	for	for	ADP
2514nk33w4v	2	10	many	many	ADJ
2514nk33w4v	2	11	species	specie	NOUN
2514nk33w4v	2	12	,	,	PUNCT
2514nk33w4v	2	13	sequencing	sequence	VERB
2514nk33w4v	2	14	of	of	ADP
2514nk33w4v	2	15	genes	gene	NOUN
2514nk33w4v	2	16	only	only	ADV
2514nk33w4v	2	17	provides	provide	VERB
2514nk33w4v	2	18	direct	direct	ADJ
2514nk33w4v	2	19	access	access	NOUN
2514nk33w4v	2	20	to	to	ADP
2514nk33w4v	2	21	the	the	DET
2514nk33w4v	2	22	most	most	ADV
2514nk33w4v	2	23	functional	functional	ADJ
2514nk33w4v	2	24	elements	element	NOUN
2514nk33w4v	2	25	of	of	ADP
2514nk33w4v	2	26	a	a	DET
2514nk33w4v	2	27	genome	genome	NOUN
2514nk33w4v	2	28	for	for	ADP
2514nk33w4v	2	29	a	a	DET
2514nk33w4v	2	30	fraction	fraction	NOUN
2514nk33w4v	2	31	of	of	ADP
2514nk33w4v	2	32	the	the	DET
2514nk33w4v	2	33	cost	cost	NOUN
2514nk33w4v	2	34	.	.	PUNCT
2514nk33w4v	3	1	this	this	DET
2514nk33w4v	3	2	advance	advance	NOUN
2514nk33w4v	3	3	brings	bring	VERB
2514nk33w4v	3	4	broad	broad	ADJ
2514nk33w4v	3	5	genetic	genetic	ADJ
2514nk33w4v	3	6	resources	resource	NOUN
2514nk33w4v	3	7	to	to	ADP
2514nk33w4v	3	8	those	those	PRON
2514nk33w4v	3	9	studying	study	VERB
2514nk33w4v	3	10	species	specie	NOUN
2514nk33w4v	3	11	of	of	ADP
2514nk33w4v	3	12	even	even	ADV
2514nk33w4v	3	13	the	the	DET
2514nk33w4v	3	14	most	most	ADV
2514nk33w4v	3	15	specialized	specialized	ADJ
2514nk33w4v	3	16	interest	interest	NOUN
2514nk33w4v	3	17	.	.	PUNCT
2514nk33w4v	4	1	we	we	PRON
2514nk33w4v	4	2	use	use	VERB
2514nk33w4v	4	3	these	these	DET
2514nk33w4v	4	4	techniques	technique	NOUN
2514nk33w4v	4	5	to	to	PART
2514nk33w4v	4	6	answer	answer	VERB
2514nk33w4v	4	7	an	an	DET
2514nk33w4v	4	8	important	important	ADJ
2514nk33w4v	4	9	ecological	ecological	ADJ
2514nk33w4v	4	10	question	question	NOUN
2514nk33w4v	4	11	:	:	PUNCT
2514nk33w4v	4	12	how	how	SCONJ
2514nk33w4v	4	13	will	will	AUX
2514nk33w4v	4	14	species	specie	NOUN
2514nk33w4v	4	15	react	react	VERB
2514nk33w4v	4	16	to	to	ADP
2514nk33w4v	4	17	climate	climate	NOUN
2514nk33w4v	4	18	change	change	NOUN
2514nk33w4v	4	19	?	?	PUNCT
2514nk33w4v	5	1	it	it	PRON
2514nk33w4v	5	2	has	have	AUX
2514nk33w4v	5	3	been	be	AUX
2514nk33w4v	5	4	assumed	assume	VERB
2514nk33w4v	5	5	that	that	SCONJ
2514nk33w4v	5	6	as	as	SCONJ
2514nk33w4v	5	7	climate	climate	NOUN
2514nk33w4v	5	8	warms	warm	VERB
2514nk33w4v	5	9	,	,	PUNCT
2514nk33w4v	5	10	populations	population	NOUN
2514nk33w4v	5	11	will	will	AUX
2514nk33w4v	5	12	simply	simply	ADV
2514nk33w4v	5	13	shift	shift	VERB
2514nk33w4v	5	14	poleward	poleward	ADV
2514nk33w4v	5	15	to	to	PART
2514nk33w4v	5	16	compensate	compensate	VERB
2514nk33w4v	5	17	.	.	PUNCT
2514nk33w4v	6	1	unfortunately	unfortunately	ADV
2514nk33w4v	6	2	,	,	PUNCT
2514nk33w4v	6	3	previous	previous	ADJ
2514nk33w4v	6	4	reseach	reseach	NOUN
2514nk33w4v	6	5	shows	show	VERB
2514nk33w4v	6	6	that	that	SCONJ
2514nk33w4v	6	7	some	some	DET
2514nk33w4v	6	8	populations	population	NOUN
2514nk33w4v	6	9	(	(	PUNCT
2514nk33w4v	6	10	of	of	ADP
2514nk33w4v	6	11	two	two	NUM
2514nk33w4v	6	12	butterflies	butterfly	NOUN
2514nk33w4v	6	13	)	)	PUNCT
2514nk33w4v	6	14	are	be	AUX
2514nk33w4v	6	15	adapted	adapt	VERB
2514nk33w4v	6	16	to	to	ADP
2514nk33w4v	6	17	local	local	ADJ
2514nk33w4v	6	18	conditions	condition	NOUN
2514nk33w4v	6	19	and	and	CCONJ
2514nk33w4v	6	20	may	may	AUX
2514nk33w4v	6	21	not	not	PART
2514nk33w4v	6	22	respond	respond	VERB
2514nk33w4v	6	23	this	this	DET
2514nk33w4v	6	24	way	way	NOUN
2514nk33w4v	6	25	.	.	PUNCT
2514nk33w4v	7	1	to	to	PART
2514nk33w4v	7	2	discover	discover	VERB
2514nk33w4v	7	3	the	the	DET
2514nk33w4v	7	4	genetic	genetic	ADJ
2514nk33w4v	7	5	basis	basis	NOUN
2514nk33w4v	7	6	of	of	ADP
2514nk33w4v	7	7	these	these	DET
2514nk33w4v	7	8	results	result	NOUN
2514nk33w4v	7	9	,	,	PUNCT
2514nk33w4v	7	10	we	we	PRON
2514nk33w4v	7	11	first	first	ADV
2514nk33w4v	7	12	sequenced	sequence	VERB
2514nk33w4v	7	13	,	,	PUNCT
2514nk33w4v	7	14	assembled	assemble	VERB
2514nk33w4v	7	15	,	,	PUNCT
2514nk33w4v	7	16	annotated	annotate	VERB
2514nk33w4v	7	17	,	,	PUNCT
2514nk33w4v	7	18	and	and	CCONJ
2514nk33w4v	7	19	analyzed	analyze	VERB
2514nk33w4v	7	20	the	the	DET
2514nk33w4v	7	21	butterfly	butterfly	NOUN
2514nk33w4v	7	22	transcriptomes	transcriptome	NOUN
2514nk33w4v	7	23	.	.	PUNCT
2514nk33w4v	8	1	because	because	SCONJ
2514nk33w4v	8	2	sequences	sequence	NOUN
2514nk33w4v	8	3	were	be	AUX
2514nk33w4v	8	4	sampled	sample	VERB
2514nk33w4v	8	5	from	from	ADP
2514nk33w4v	8	6	wild	wild	NOUN
2514nk33w4v	8	7	-	-	PUNCT
2514nk33w4v	8	8	caught	catch	VERB
2514nk33w4v	8	9	populations	population	NOUN
2514nk33w4v	8	10	,	,	PUNCT
2514nk33w4v	8	11	we	we	PRON
2514nk33w4v	8	12	developed	develop	VERB
2514nk33w4v	8	13	novel	novel	ADJ
2514nk33w4v	8	14	methods	method	NOUN
2514nk33w4v	8	15	to	to	PART
2514nk33w4v	8	16	ensure	ensure	VERB
2514nk33w4v	8	17	high	high	ADJ
2514nk33w4v	8	18	quality	quality	NOUN
2514nk33w4v	8	19	results	result	NOUN
2514nk33w4v	8	20	in	in	ADP
2514nk33w4v	8	21	this	this	DET
2514nk33w4v	8	22	setting	setting	NOUN
2514nk33w4v	8	23	.	.	PUNCT
2514nk33w4v	9	1	we	we	PRON
2514nk33w4v	9	2	then	then	ADV
2514nk33w4v	9	3	designed	design	VERB
2514nk33w4v	9	4	custom	custom	NOUN
2514nk33w4v	9	5	microarrays	microarray	NOUN
2514nk33w4v	9	6	to	to	PART
2514nk33w4v	9	7	measure	measure	VERB
2514nk33w4v	9	8	how	how	SCONJ
2514nk33w4v	9	9	much	much	ADJ
2514nk33w4v	9	10	of	of	ADP
2514nk33w4v	9	11	every	every	DET
2514nk33w4v	9	12	gene	gene	NOUN
2514nk33w4v	9	13	is	be	AUX
2514nk33w4v	9	14	expressed	express	VERB
2514nk33w4v	9	15	in	in	ADP
2514nk33w4v	9	16	a	a	DET
2514nk33w4v	9	17	given	give	VERB
2514nk33w4v	9	18	experimental	experimental	ADJ
2514nk33w4v	9	19	setting	setting	NOUN
2514nk33w4v	9	20	.	.	PUNCT
2514nk33w4v	10	1	these	these	PRON
2514nk33w4v	10	2	,	,	PUNCT
2514nk33w4v	10	3	coupled	couple	VERB
2514nk33w4v	10	4	with	with	ADP
2514nk33w4v	10	5	a	a	DET
2514nk33w4v	10	6	robust	robust	ADJ
2514nk33w4v	10	7	experimental	experimental	ADJ
2514nk33w4v	10	8	design	design	NOUN
2514nk33w4v	10	9	,	,	PUNCT
2514nk33w4v	10	10	revealed	reveal	VERB
2514nk33w4v	10	11	a	a	DET
2514nk33w4v	10	12	variety	variety	NOUN
2514nk33w4v	10	13	of	of	ADP
2514nk33w4v	10	14	genes	gene	NOUN
2514nk33w4v	10	15	and	and	CCONJ
2514nk33w4v	10	16	functional	functional	ADJ
2514nk33w4v	10	17	categories	category	NOUN
2514nk33w4v	10	18	carrying	carry	VERB
2514nk33w4v	10	19	the	the	DET
2514nk33w4v	10	20	signature	signature	NOUN
2514nk33w4v	10	21	of	of	ADP
2514nk33w4v	10	22	local	local	ADJ
2514nk33w4v	10	23	adaptation	adaptation	NOUN
2514nk33w4v	10	24	to	to	ADP
2514nk33w4v	10	25	climate	climate	NOUN
2514nk33w4v	10	26	.	.	PUNCT
2514nk33w4v	11	1	the	the	DET
2514nk33w4v	11	2	bioinformatic	bioinformatic	ADJ
2514nk33w4v	11	3	difficulties	difficulty	NOUN
2514nk33w4v	11	4	associated	associate	VERB
2514nk33w4v	11	5	with	with	ADP
2514nk33w4v	11	6	such	such	ADJ
2514nk33w4v	11	7	projects	project	NOUN
2514nk33w4v	11	8	are	be	AUX
2514nk33w4v	11	9	many	many	ADJ
2514nk33w4v	11	10	.	.	PUNCT
2514nk33w4v	12	1	in	in	ADP
2514nk33w4v	12	2	particular	particular	ADJ
2514nk33w4v	12	3	,	,	PUNCT
2514nk33w4v	12	4	transcriptome	transcriptome	ADJ
2514nk33w4v	12	5	assembly	assembly	NOUN
2514nk33w4v	12	6	presents	present	VERB
2514nk33w4v	12	7	unique	unique	ADJ
2514nk33w4v	12	8	challenges	challenge	NOUN
2514nk33w4v	12	9	,	,	PUNCT
2514nk33w4v	12	10	and	and	CCONJ
2514nk33w4v	12	11	it	it	PRON
2514nk33w4v	12	12	is	be	AUX
2514nk33w4v	12	13	not	not	PART
2514nk33w4v	12	14	yet	yet	ADV
2514nk33w4v	12	15	clear	clear	ADJ
2514nk33w4v	12	16	how	how	SCONJ
2514nk33w4v	12	17	to	to	PART
2514nk33w4v	12	18	quantitatively	quantitatively	ADV
2514nk33w4v	12	19	evaluate	evaluate	VERB
2514nk33w4v	12	20	assemblies	assembly	NOUN
2514nk33w4v	12	21	.	.	PUNCT
2514nk33w4v	13	1	by	by	ADP
2514nk33w4v	13	2	simulating	simulate	VERB
2514nk33w4v	13	3	sequencing	sequence	VERB
2514nk33w4v	13	4	and	and	CCONJ
2514nk33w4v	13	5	comparing	compare	VERB
2514nk33w4v	13	6	assembler	assembler	NOUN
2514nk33w4v	13	7	results	result	NOUN
2514nk33w4v	13	8	to	to	ADP
2514nk33w4v	13	9	those	those	PRON
2514nk33w4v	13	10	of	of	ADP
2514nk33w4v	13	11	perfect	perfect	ADJ
2514nk33w4v	13	12	assemblies	assembly	NOUN
2514nk33w4v	13	13	,	,	PUNCT
2514nk33w4v	13	14	we	we	PRON
2514nk33w4v	13	15	evaluate	evaluate	VERB
2514nk33w4v	13	16	a	a	DET
2514nk33w4v	13	17	number	number	NOUN
2514nk33w4v	13	18	of	of	ADP
2514nk33w4v	13	19	commonly	commonly	ADV
2514nk33w4v	13	20	used	use	VERB
2514nk33w4v	13	21	and	and	CCONJ
2514nk33w4v	13	22	novel	novel	ADJ
2514nk33w4v	13	23	quality	quality	NOUN
2514nk33w4v	13	24	metrics	metric	NOUN
2514nk33w4v	13	25	.	.	PUNCT
2514nk33w4v	14	1	this	this	DET
2514nk33w4v	14	2	study	study	NOUN
2514nk33w4v	14	3	reveals	reveal	VERB
2514nk33w4v	14	4	that	that	SCONJ
2514nk33w4v	14	5	some	some	DET
2514nk33w4v	14	6	quality	quality	NOUN
2514nk33w4v	14	7	metrics	metric	NOUN
2514nk33w4v	14	8	reflect	reflect	VERB
2514nk33w4v	14	9	biological	biological	ADJ
2514nk33w4v	14	10	accuracy	accuracy	NOUN
2514nk33w4v	14	11	while	while	SCONJ
2514nk33w4v	14	12	others	other	NOUN
2514nk33w4v	14	13	(	(	PUNCT
2514nk33w4v	14	14	such	such	ADJ
2514nk33w4v	14	15	as	as	ADP
2514nk33w4v	14	16	contig	contig	PROPN
2514nk33w4v	14	17	n50	n50	PROPN
2514nk33w4v	14	18	length	length	PROPN
2514nk33w4v	14	19	)	)	PUNCT
2514nk33w4v	14	20	do	do	VERB
2514nk33w4v	14	21	not	not	PART
2514nk33w4v	14	22	and	and	CCONJ
2514nk33w4v	14	23	provides	provide	VERB
2514nk33w4v	14	24	vital	vital	ADJ
2514nk33w4v	14	25	information	information	NOUN
2514nk33w4v	14	26	for	for	ADP
2514nk33w4v	14	27	researchers	researcher	NOUN
2514nk33w4v	14	28	making	make	VERB
2514nk33w4v	14	29	use	use	NOUN
2514nk33w4v	14	30	of	of	ADP
2514nk33w4v	14	31	transcriptome	transcriptome	ADJ
2514nk33w4v	14	32	data	datum	NOUN
2514nk33w4v	14	33	.	.	PUNCT
2514nk33w4v	15	1	finally	finally	ADV
2514nk33w4v	15	2	,	,	PUNCT
2514nk33w4v	15	3	when	when	SCONJ
2514nk33w4v	15	4	sequences	sequence	NOUN
2514nk33w4v	15	5	are	be	AUX
2514nk33w4v	15	6	sourced	source	VERB
2514nk33w4v	15	7	from	from	ADP
2514nk33w4v	15	8	many	many	ADJ
2514nk33w4v	15	9	genetically	genetically	ADV
2514nk33w4v	15	10	diverse	diverse	ADJ
2514nk33w4v	15	11	individuals	individual	NOUN
2514nk33w4v	15	12	,	,	PUNCT
2514nk33w4v	15	13	our	our	PRON
2514nk33w4v	15	14	tools	tool	NOUN
2514nk33w4v	15	15	would	would	AUX
2514nk33w4v	15	16	ideally	ideally	ADV
2514nk33w4v	15	17	reveal	reveal	VERB
2514nk33w4v	15	18	this	this	DET
2514nk33w4v	15	19	diversity	diversity	NOUN
2514nk33w4v	15	20	rather	rather	ADV
2514nk33w4v	15	21	than	than	ADP
2514nk33w4v	15	22	produce	produce	VERB
2514nk33w4v	15	23	a	a	DET
2514nk33w4v	15	24	simple	simple	ADJ
2514nk33w4v	15	25	genetic	genetic	ADJ
2514nk33w4v	15	26	consensus	consensus	NOUN
2514nk33w4v	15	27	.	.	PUNCT
2514nk33w4v	16	1	to	to	ADP
2514nk33w4v	16	2	this	this	DET
2514nk33w4v	16	3	end	end	NOUN
2514nk33w4v	16	4	,	,	PUNCT
2514nk33w4v	16	5	we	we	PRON
2514nk33w4v	16	6	develop	develop	VERB
2514nk33w4v	16	7	algorithms	algorithm	NOUN
2514nk33w4v	16	8	to	to	PART
2514nk33w4v	16	9	seperately	seperately	ADV
2514nk33w4v	16	10	assemble	assemble	VERB
2514nk33w4v	16	11	diverse	diverse	ADJ
2514nk33w4v	16	12	sequences	sequence	NOUN
2514nk33w4v	16	13	(	(	PUNCT
2514nk33w4v	16	14	haplotypes	haplotype	NOUN
2514nk33w4v	16	15	)	)	PUNCT
2514nk33w4v	16	16	accurately	accurately	ADV
2514nk33w4v	16	17	in	in	ADP
2514nk33w4v	16	18	the	the	DET
2514nk33w4v	16	19	face	face	NOUN
2514nk33w4v	16	20	of	of	ADP
2514nk33w4v	16	21	both	both	DET
2514nk33w4v	16	22	sequencing	sequence	VERB
2514nk33w4v	16	23	error	error	NOUN
2514nk33w4v	16	24	and	and	CCONJ
2514nk33w4v	16	25	data	data	NOUN
2514nk33w4v	16	26	ambiguity	ambiguity	NOUN
2514nk33w4v	16	27	.	.	PUNCT
2514nk33w4v	17	1	these	these	DET
2514nk33w4v	17	2	methods	method	NOUN
2514nk33w4v	17	3	will	will	AUX
2514nk33w4v	17	4	help	help	VERB
2514nk33w4v	17	5	reveal	reveal	VERB
2514nk33w4v	17	6	biodiversity	biodiversity	NOUN
2514nk33w4v	17	7	in	in	ADP
2514nk33w4v	17	8	applications	application	NOUN
2514nk33w4v	17	9	ranging	range	VERB
2514nk33w4v	17	10	from	from	ADP
2514nk33w4v	17	11	community	community	NOUN
2514nk33w4v	17	12	ecology	ecology	NOUN
2514nk33w4v	17	13	to	to	ADP
2514nk33w4v	17	14	epidemiology	epidemiology	NOUN
2514nk33w4v	17	15	.	.	PUNCT