id	sid	tid	token	lemma	pos
2227mp51r18	1	1	networks	network	NOUN
2227mp51r18	1	2	can	can	AUX
2227mp51r18	1	3	be	be	AUX
2227mp51r18	1	4	used	use	VERB
2227mp51r18	1	5	to	to	PART
2227mp51r18	1	6	model	model	VERB
2227mp51r18	1	7	complex	complex	ADJ
2227mp51r18	1	8	real	real	ADJ
2227mp51r18	1	9	-	-	PUNCT
2227mp51r18	1	10	world	world	NOUN
2227mp51r18	1	11	systems	system	NOUN
2227mp51r18	1	12	from	from	ADP
2227mp51r18	1	13	many	many	ADJ
2227mp51r18	1	14	domains	domain	NOUN
2227mp51r18	1	15	,	,	PUNCT
2227mp51r18	1	16	including	include	VERB
2227mp51r18	1	17	computational	computational	ADJ
2227mp51r18	1	18	biology	biology	NOUN
2227mp51r18	1	19	.	.	PUNCT
2227mp51r18	2	1	a	a	DET
2227mp51r18	2	2	protein	protein	NOUN
2227mp51r18	2	3	-	-	PUNCT
2227mp51r18	2	4	protein	protein	NOUN
2227mp51r18	2	5	interaction	interaction	NOUN
2227mp51r18	2	6	(	(	PUNCT
2227mp51r18	2	7	ppi	ppi	PROPN
2227mp51r18	2	8	)	)	PUNCT
2227mp51r18	2	9	network	network	NOUN
2227mp51r18	2	10	(	(	PUNCT
2227mp51r18	2	11	ppin	ppin	NOUN
2227mp51r18	2	12	)	)	PUNCT
2227mp51r18	2	13	,	,	PUNCT
2227mp51r18	2	14	in	in	ADP
2227mp51r18	2	15	which	which	PRON
2227mp51r18	2	16	nodes	node	NOUN
2227mp51r18	2	17	are	be	AUX
2227mp51r18	2	18	proteins	protein	NOUN
2227mp51r18	2	19	and	and	CCONJ
2227mp51r18	2	20	edges	edge	NOUN
2227mp51r18	2	21	are	be	AUX
2227mp51r18	2	22	ppis	ppis	ADJ
2227mp51r18	2	23	,	,	PUNCT
2227mp51r18	2	24	is	be	AUX
2227mp51r18	2	25	a	a	DET
2227mp51r18	2	26	popular	popular	ADJ
2227mp51r18	2	27	type	type	NOUN
2227mp51r18	2	28	of	of	ADP
2227mp51r18	2	29	biological	biological	ADJ
2227mp51r18	2	30	network	network	NOUN
2227mp51r18	2	31	.	.	PUNCT
2227mp51r18	3	1	while	while	SCONJ
2227mp51r18	3	2	ppin	ppin	ADJ
2227mp51r18	3	3	data	datum	NOUN
2227mp51r18	3	4	are	be	AUX
2227mp51r18	3	5	becoming	become	VERB
2227mp51r18	3	6	widely	widely	ADV
2227mp51r18	3	7	available	available	ADJ
2227mp51r18	3	8	thanks	thank	NOUN
2227mp51r18	3	9	to	to	ADP
2227mp51r18	3	10	biotechnological	biotechnological	ADJ
2227mp51r18	3	11	advancements	advancement	NOUN
2227mp51r18	3	12	,	,	PUNCT
2227mp51r18	3	13	functions	function	NOUN
2227mp51r18	3	14	of	of	ADP
2227mp51r18	3	15	many	many	ADJ
2227mp51r18	3	16	proteins	protein	NOUN
2227mp51r18	3	17	remain	remain	VERB
2227mp51r18	3	18	unknown	unknown	ADJ
2227mp51r18	3	19	.	.	PUNCT
2227mp51r18	4	1	as	as	SCONJ
2227mp51r18	4	2	such	such	ADJ
2227mp51r18	4	3	,	,	PUNCT
2227mp51r18	4	4	many	many	ADJ
2227mp51r18	4	5	computational	computational	ADJ
2227mp51r18	4	6	techniques	technique	NOUN
2227mp51r18	4	7	have	have	AUX
2227mp51r18	4	8	been	be	AUX
2227mp51r18	4	9	developed	develop	VERB
2227mp51r18	4	10	to	to	PART
2227mp51r18	4	11	analyze	analyze	VERB
2227mp51r18	4	12	ppins	ppin	NOUN
2227mp51r18	4	13	in	in	ADP
2227mp51r18	4	14	order	order	NOUN
2227mp51r18	4	15	to	to	PART
2227mp51r18	4	16	gain	gain	VERB
2227mp51r18	4	17	insights	insight	NOUN
2227mp51r18	4	18	into	into	ADP
2227mp51r18	4	19	proteins	protein	NOUN
2227mp51r18	4	20	'	'	PART
2227mp51r18	4	21	functions.one	functions.one	NOUN
2227mp51r18	4	22	such	such	ADJ
2227mp51r18	4	23	technique	technique	NOUN
2227mp51r18	4	24	is	be	AUX
2227mp51r18	4	25	biological	biological	ADJ
2227mp51r18	4	26	network	network	NOUN
2227mp51r18	4	27	alignment	alignment	NOUN
2227mp51r18	4	28	(	(	PUNCT
2227mp51r18	4	29	na	na	NOUN
2227mp51r18	4	30	)	)	PUNCT
2227mp51r18	4	31	,	,	PUNCT
2227mp51r18	4	32	which	which	PRON
2227mp51r18	4	33	aims	aim	VERB
2227mp51r18	4	34	to	to	PART
2227mp51r18	4	35	find	find	VERB
2227mp51r18	4	36	a	a	DET
2227mp51r18	4	37	node	node	NOUN
2227mp51r18	4	38	mapping	mapping	NOUN
2227mp51r18	4	39	between	between	ADP
2227mp51r18	4	40	species	specie	NOUN
2227mp51r18	4	41	'	'	PART
2227mp51r18	4	42	molecular	molecular	ADJ
2227mp51r18	4	43	networks	network	NOUN
2227mp51r18	4	44	that	that	PRON
2227mp51r18	4	45	uncovers	uncover	VERB
2227mp51r18	4	46	similar	similar	ADJ
2227mp51r18	4	47	network	network	NOUN
2227mp51r18	4	48	regions	region	NOUN
2227mp51r18	4	49	,	,	PUNCT
2227mp51r18	4	50	thus	thus	ADV
2227mp51r18	4	51	allowing	allow	VERB
2227mp51r18	4	52	for	for	ADP
2227mp51r18	4	53	the	the	DET
2227mp51r18	4	54	transfer	transfer	NOUN
2227mp51r18	4	55	of	of	ADP
2227mp51r18	4	56	functional	functional	ADJ
2227mp51r18	4	57	knowledge	knowledge	NOUN
2227mp51r18	4	58	between	between	ADP
2227mp51r18	4	59	the	the	DET
2227mp51r18	4	60	aligned	aligned	ADJ
2227mp51r18	4	61	nodes	node	NOUN
2227mp51r18	4	62	.	.	PUNCT
2227mp51r18	5	1	however	however	ADV
2227mp51r18	5	2	,	,	PUNCT
2227mp51r18	5	3	a	a	DET
2227mp51r18	5	4	major	major	ADJ
2227mp51r18	5	5	issue	issue	NOUN
2227mp51r18	5	6	of	of	ADP
2227mp51r18	5	7	na	na	ADP
2227mp51r18	5	8	methods	method	NOUN
2227mp51r18	5	9	is	be	AUX
2227mp51r18	5	10	that	that	SCONJ
2227mp51r18	5	11	often	often	ADV
2227mp51r18	5	12	aligned	align	VERB
2227mp51r18	5	13	nodes	node	NOUN
2227mp51r18	5	14	(	(	PUNCT
2227mp51r18	5	15	proteins	protein	NOUN
2227mp51r18	5	16	)	)	PUNCT
2227mp51r18	5	17	do	do	AUX
2227mp51r18	5	18	not	not	PART
2227mp51r18	5	19	actually	actually	ADV
2227mp51r18	5	20	share	share	VERB
2227mp51r18	5	21	the	the	DET
2227mp51r18	5	22	same	same	ADJ
2227mp51r18	5	23	function	function	NOUN
2227mp51r18	5	24	.	.	PUNCT
2227mp51r18	6	1	so	so	ADV
2227mp51r18	6	2	we	we	PRON
2227mp51r18	6	3	aim	aim	VERB
2227mp51r18	6	4	to	to	PART
2227mp51r18	6	5	address	address	VERB
2227mp51r18	6	6	such	such	ADJ
2227mp51r18	6	7	challenges	challenge	NOUN
2227mp51r18	6	8	by	by	ADP
2227mp51r18	6	9	introducing	introduce	VERB
2227mp51r18	6	10	several	several	ADJ
2227mp51r18	6	11	novel	novel	ADJ
2227mp51r18	6	12	computational	computational	ADJ
2227mp51r18	6	13	advances	advance	NOUN
2227mp51r18	6	14	,	,	PUNCT
2227mp51r18	6	15	such	such	ADJ
2227mp51r18	6	16	as	as	ADP
2227mp51r18	6	17	allowing	allow	VERB
2227mp51r18	6	18	for	for	ADP
2227mp51r18	6	19	the	the	DET
2227mp51r18	6	20	alignment	alignment	NOUN
2227mp51r18	6	21	of	of	ADP
2227mp51r18	6	22	heterogeneous	heterogeneous	ADJ
2227mp51r18	6	23	biological	biological	ADJ
2227mp51r18	6	24	networks	network	NOUN
2227mp51r18	6	25	for	for	ADP
2227mp51r18	6	26	the	the	DET
2227mp51r18	6	27	first	first	ADJ
2227mp51r18	6	28	time	time	NOUN
2227mp51r18	6	29	,	,	PUNCT
2227mp51r18	6	30	or	or	CCONJ
2227mp51r18	6	31	by	by	ADP
2227mp51r18	6	32	learning	learn	VERB
2227mp51r18	6	33	from	from	ADP
2227mp51r18	6	34	-omics	-omic	NOUN
2227mp51r18	6	35	data	datum	NOUN
2227mp51r18	6	36	what	what	DET
2227mp51r18	6	37	patterns	pattern	NOUN
2227mp51r18	6	38	of	of	ADP
2227mp51r18	6	39	network	network	NOUN
2227mp51r18	6	40	topological	topological	ADJ
2227mp51r18	6	41	relatedness	relatedness	NOUN
2227mp51r18	6	42	(	(	PUNCT
2227mp51r18	6	43	rather	rather	ADV
2227mp51r18	6	44	than	than	ADP
2227mp51r18	6	45	similarity	similarity	NOUN
2227mp51r18	6	46	)	)	PUNCT
2227mp51r18	6	47	correspond	correspond	VERB
2227mp51r18	6	48	to	to	ADP
2227mp51r18	6	49	functional	functional	ADJ
2227mp51r18	6	50	relatedness	relatedness	NOUN
2227mp51r18	6	51	between	between	ADP
2227mp51r18	6	52	biological	biological	ADJ
2227mp51r18	6	53	networks	network	NOUN
2227mp51r18	6	54	of	of	ADP
2227mp51r18	6	55	different	different	ADJ
2227mp51r18	6	56	species	specie	NOUN
2227mp51r18	6	57	.	.	PUNCT
2227mp51r18	7	1	we	we	PRON
2227mp51r18	7	2	show	show	VERB
2227mp51r18	7	3	that	that	SCONJ
2227mp51r18	7	4	the	the	DET
2227mp51r18	7	5	novel	novel	ADJ
2227mp51r18	7	6	computational	computational	ADJ
2227mp51r18	7	7	advances	advance	NOUN
2227mp51r18	7	8	improve	improve	VERB
2227mp51r18	7	9	the	the	DET
2227mp51r18	7	10	accuracy	accuracy	NOUN
2227mp51r18	7	11	of	of	ADP
2227mp51r18	7	12	across	across	ADP
2227mp51r18	7	13	-	-	PUNCT
2227mp51r18	7	14	species	species	NOUN
2227mp51r18	7	15	protein	protein	NOUN
2227mp51r18	7	16	functional	functional	ADJ
2227mp51r18	7	17	prediction	prediction	NOUN
2227mp51r18	7	18	compared	compare	VERB
2227mp51r18	7	19	to	to	ADP
2227mp51r18	7	20	existing	exist	VERB
2227mp51r18	7	21	na	na	ADP
2227mp51r18	7	22	methods.one	methods.one	PROPN
2227mp51r18	7	23	limitation	limitation	NOUN
2227mp51r18	7	24	of	of	ADP
2227mp51r18	7	25	across	across	NOUN
2227mp51r18	7	26	-	-	PUNCT
2227mp51r18	7	27	species	specie	NOUN
2227mp51r18	7	28	na	na	PART
2227mp51r18	7	29	is	be	AUX
2227mp51r18	7	30	that	that	SCONJ
2227mp51r18	7	31	it	it	PRON
2227mp51r18	7	32	only	only	ADV
2227mp51r18	7	33	considers	consider	VERB
2227mp51r18	7	34	biological	biological	ADJ
2227mp51r18	7	35	networks	network	NOUN
2227mp51r18	7	36	at	at	ADP
2227mp51r18	7	37	the	the	DET
2227mp51r18	7	38	same	same	ADJ
2227mp51r18	7	39	scale	scale	NOUN
2227mp51r18	7	40	:	:	PUNCT
2227mp51r18	7	41	ppins	ppin	NOUN
2227mp51r18	7	42	.	.	PUNCT
2227mp51r18	8	1	however	however	ADV
2227mp51r18	8	2	,	,	PUNCT
2227mp51r18	8	3	at	at	ADP
2227mp51r18	8	4	a	a	DET
2227mp51r18	8	5	more	more	ADV
2227mp51r18	8	6	fine	fine	ADJ
2227mp51r18	8	7	-	-	PUNCT
2227mp51r18	8	8	grained	grain	VERB
2227mp51r18	8	9	scale	scale	NOUN
2227mp51r18	8	10	,	,	PUNCT
2227mp51r18	8	11	a	a	DET
2227mp51r18	8	12	protein	protein	NOUN
2227mp51r18	8	13	's	's	PART
2227mp51r18	8	14	3d	3d	NOUN
2227mp51r18	8	15	structure	structure	NOUN
2227mp51r18	8	16	has	have	VERB
2227mp51r18	8	17	important	important	ADJ
2227mp51r18	8	18	implications	implication	NOUN
2227mp51r18	8	19	for	for	ADP
2227mp51r18	8	20	its	its	PRON
2227mp51r18	8	21	function	function	NOUN
2227mp51r18	8	22	.	.	PUNCT
2227mp51r18	9	1	such	such	ADJ
2227mp51r18	9	2	structures	structure	NOUN
2227mp51r18	9	3	have	have	AUX
2227mp51r18	9	4	been	be	AUX
2227mp51r18	9	5	modeled	model	VERB
2227mp51r18	9	6	using	use	VERB
2227mp51r18	9	7	protein	protein	NOUN
2227mp51r18	9	8	structure	structure	NOUN
2227mp51r18	9	9	networks	network	NOUN
2227mp51r18	9	10	(	(	PUNCT
2227mp51r18	9	11	psns	psns	NOUN
2227mp51r18	9	12	)	)	PUNCT
2227mp51r18	9	13	,	,	PUNCT
2227mp51r18	9	14	where	where	SCONJ
2227mp51r18	9	15	nodes	node	NOUN
2227mp51r18	9	16	are	be	AUX
2227mp51r18	9	17	amino	amino	ADJ
2227mp51r18	9	18	acids	acid	NOUN
2227mp51r18	9	19	and	and	CCONJ
2227mp51r18	9	20	edges	edge	NOUN
2227mp51r18	9	21	join	join	VERB
2227mp51r18	9	22	those	those	PRON
2227mp51r18	9	23	that	that	PRON
2227mp51r18	9	24	are	be	AUX
2227mp51r18	9	25	close	close	ADJ
2227mp51r18	9	26	in	in	ADP
2227mp51r18	9	27	the	the	DET
2227mp51r18	9	28	3d	3d	PROPN
2227mp51r18	9	29	crystal	crystal	NOUN
2227mp51r18	9	30	structure	structure	NOUN
2227mp51r18	9	31	,	,	PUNCT
2227mp51r18	9	32	to	to	ADP
2227mp51r18	9	33	great	great	ADJ
2227mp51r18	9	34	success	success	NOUN
2227mp51r18	9	35	.	.	PUNCT
2227mp51r18	10	1	thus	thus	ADV
2227mp51r18	10	2	,	,	PUNCT
2227mp51r18	10	3	we	we	PRON
2227mp51r18	10	4	argue	argue	VERB
2227mp51r18	10	5	that	that	SCONJ
2227mp51r18	10	6	ppin	ppin	NOUN
2227mp51r18	10	7	and	and	CCONJ
2227mp51r18	10	8	psn	psn	PROPN
2227mp51r18	10	9	data	datum	NOUN
2227mp51r18	10	10	should	should	AUX
2227mp51r18	10	11	be	be	AUX
2227mp51r18	10	12	integrated	integrate	VERB
2227mp51r18	10	13	as	as	ADP
2227mp51r18	10	14	a	a	DET
2227mp51r18	10	15	`	`	PUNCT
2227mp51r18	10	16	`	`	PUNCT
2227mp51r18	10	17	network	network	NOUN
2227mp51r18	10	18	of	of	ADP
2227mp51r18	10	19	networks	network	NOUN
2227mp51r18	10	20	''	''	PUNCT
2227mp51r18	10	21	(	(	PUNCT
2227mp51r18	10	22	non	non	PROPN
2227mp51r18	10	23	)	)	PUNCT
2227mp51r18	10	24	.	.	PUNCT
2227mp51r18	11	1	we	we	PRON
2227mp51r18	11	2	aim	aim	VERB
2227mp51r18	11	3	to	to	PART
2227mp51r18	11	4	answer	answer	VERB
2227mp51r18	11	5	whether	whether	SCONJ
2227mp51r18	11	6	non	non	ADJ
2227mp51r18	11	7	-	-	ADJ
2227mp51r18	11	8	based	base	VERB
2227mp51r18	11	9	data	data	NOUN
2227mp51r18	11	10	integration	integration	NOUN
2227mp51r18	11	11	is	be	AUX
2227mp51r18	11	12	effective	effective	ADJ
2227mp51r18	11	13	,	,	PUNCT
2227mp51r18	11	14	by	by	ADP
2227mp51r18	11	15	evaluating	evaluate	VERB
2227mp51r18	11	16	whether	whether	SCONJ
2227mp51r18	11	17	non	non	ADJ
2227mp51r18	11	18	-	-	ADJ
2227mp51r18	11	19	based	base	VERB
2227mp51r18	11	20	protein	protein	NOUN
2227mp51r18	11	21	functional	functional	ADJ
2227mp51r18	11	22	prediction	prediction	NOUN
2227mp51r18	11	23	,	,	PUNCT
2227mp51r18	11	24	fusing	fuse	VERB
2227mp51r18	11	25	the	the	DET
2227mp51r18	11	26	complementary	complementary	ADJ
2227mp51r18	11	27	ppin	ppin	NOUN
2227mp51r18	11	28	and	and	CCONJ
2227mp51r18	11	29	psn	psn	PROPN
2227mp51r18	11	30	information	information	NOUN
2227mp51r18	11	31	,	,	PUNCT
2227mp51r18	11	32	is	be	AUX
2227mp51r18	11	33	more	more	ADV
2227mp51r18	11	34	accurate	accurate	ADJ
2227mp51r18	11	35	than	than	ADP
2227mp51r18	11	36	single	single	ADJ
2227mp51r18	11	37	-	-	PUNCT
2227mp51r18	11	38	scale	scale	NOUN
2227mp51r18	11	39	functional	functional	ADJ
2227mp51r18	11	40	prediction	prediction	NOUN
2227mp51r18	11	41	,	,	PUNCT
2227mp51r18	11	42	using	use	VERB
2227mp51r18	11	43	only	only	ADJ
2227mp51r18	11	44	ppin	ppin	ADJ
2227mp51r18	11	45	or	or	CCONJ
2227mp51r18	11	46	only	only	ADV
2227mp51r18	11	47	psn	psn	PROPN
2227mp51r18	11	48	information	information	NOUN
2227mp51r18	11	49	.	.	PUNCT
2227mp51r18	12	1	we	we	PRON
2227mp51r18	12	2	show	show	VERB
2227mp51r18	12	3	that	that	SCONJ
2227mp51r18	12	4	non	non	ADJ
2227mp51r18	12	5	-	-	ADJ
2227mp51r18	12	6	based	base	VERB
2227mp51r18	12	7	data	data	NOUN
2227mp51r18	12	8	integration	integration	NOUN
2227mp51r18	12	9	has	have	VERB
2227mp51r18	12	10	the	the	DET
2227mp51r18	12	11	potential	potential	NOUN
2227mp51r18	12	12	to	to	PART
2227mp51r18	12	13	uncover	uncover	VERB
2227mp51r18	12	14	novel	novel	ADJ
2227mp51r18	12	15	biological	biological	ADJ
2227mp51r18	12	16	knowledge	knowledge	NOUN
2227mp51r18	12	17	compared	compare	VERB
2227mp51r18	12	18	to	to	ADP
2227mp51r18	12	19	only	only	ADV
2227mp51r18	12	20	considering	consider	VERB
2227mp51r18	12	21	a	a	DET
2227mp51r18	12	22	single	single	ADJ
2227mp51r18	12	23	scale	scale	NOUN
2227mp51r18	12	24	,	,	PUNCT
2227mp51r18	12	25	and	and	CCONJ
2227mp51r18	12	26	thus	thus	ADV
2227mp51r18	12	27	is	be	AUX
2227mp51r18	12	28	an	an	DET
2227mp51r18	12	29	exciting	exciting	ADJ
2227mp51r18	12	30	direction	direction	NOUN
2227mp51r18	12	31	for	for	ADP
2227mp51r18	12	32	future	future	ADJ
2227mp51r18	12	33	research	research	NOUN
2227mp51r18	12	34	.	.	PUNCT