id	author	title	date	pages	extension	mime	words	sentence	flesch	summary	cache	txt
h989r210119	Scott Hampton	Improved Sampling of Configuration Space of Biomolecules Using Shadow Hybrid Monte Carlo	2004		.txt	text/plain	151	6	43	This thesis introduces shadow hybrid Monte Carlo (SHMC), a propagator through phase space that enhances the scaling of sampling with space dimensionality. We present the derivation of SHMC, along with: proof that it preserves microscopic reversibility; analysis of the asymptotic speedup of SHMC over HMC, which is shown to be $O(N^{1/4})$ when using Verlet integrators; and results evaluating correctness and efficiency.	cache/h989r210119.txt	txt/h989r210119.txt