id	sid	tid	token	lemma	pos
10_1101-2021_02_08_430275	1	1	Next	next	JJ
10_1101-2021_02_08_430275	1	2	-	-	HYPH
10_1101-2021_02_08_430275	1	3	generation	generation	NN
10_1101-2021_02_08_430275	1	4	sequencing	sequencing	NN
10_1101-2021_02_08_430275	1	5	-	-	HYPH
10_1101-2021_02_08_430275	1	6	based	base	VBN
10_1101-2021_02_08_430275	1	7	bulked	bulk	VBN
10_1101-2021_02_08_430275	1	8	segregant	segregant	JJ
10_1101-2021_02_08_430275	1	9	analysis	analysis	NN
10_1101-2021_02_08_430275	1	10	without	without	IN
10_1101-2021_02_08_430275	1	11	sequencing	sequence	VBG
10_1101-2021_02_08_430275	1	12	the	the	DT
10_1101-2021_02_08_430275	1	13	parental	parental	JJ
10_1101-2021_02_08_430275	1	14	genomes	genome	NNS
10_1101-2021_02_08_430275	1	15	DR	DR	NNP
10_1101-2021_02_08_430275	1	16	AF	AF	NNP
10_1101-2021_02_08_430275	1	17	T	T	NNP
10_1101-2021_02_08_430275	1	18	Next	Next	NNP
10_1101-2021_02_08_430275	1	19	-	-	HYPH
10_1101-2021_02_08_430275	1	20	generation	generation	NN
10_1101-2021_02_08_430275	1	21	sequencing	sequencing	NN
10_1101-2021_02_08_430275	1	22	-	-	HYPH
10_1101-2021_02_08_430275	1	23	based	base	VBN
10_1101-2021_02_08_430275	1	24	bulked	bulk	VBN
10_1101-2021_02_08_430275	1	25	segregant	segregant	JJ
10_1101-2021_02_08_430275	1	26	analysis	analysis	NN
10_1101-2021_02_08_430275	1	27	without	without	IN
10_1101-2021_02_08_430275	1	28	sequencing	sequence	VBG
10_1101-2021_02_08_430275	1	29	the	the	DT
10_1101-2021_02_08_430275	1	30	parental	parental	JJ
10_1101-2021_02_08_430275	1	31	genomes	genome	NNS
10_1101-2021_02_08_430275	1	32	Jianbo	Jianbo	NNP
10_1101-2021_02_08_430275	1	33	Zhanga	Zhanga	NNP
10_1101-2021_02_08_430275	1	34	,	,	,
10_1101-2021_02_08_430275	1	35	�	�	NNP
10_1101-2021_02_08_430275	1	36	and	and	CC
10_1101-2021_02_08_430275	1	37	Dilip	Dilip	NNP
10_1101-2021_02_08_430275	1	38	R.	R.	NNP
10_1101-2021_02_08_430275	1	39	Pantheea	Pantheea	NNP
10_1101-2021_02_08_430275	1	40	,	,	,
10_1101-2021_02_08_430275	1	41	�	�	NNP
10_1101-2021_02_08_430275	1	42	a	a	DT
10_1101-2021_02_08_430275	1	43	Department	Department	NNP
10_1101-2021_02_08_430275	1	44	of	of	IN
10_1101-2021_02_08_430275	1	45	Horticultural	Horticultural	NNP
10_1101-2021_02_08_430275	1	46	Science	Science	NNP
10_1101-2021_02_08_430275	1	47	,	,	,
10_1101-2021_02_08_430275	1	48	North	North	NNP
10_1101-2021_02_08_430275	1	49	Carolina	Carolina	NNP
10_1101-2021_02_08_430275	1	50	State	State	NNP
10_1101-2021_02_08_430275	1	51	University	University	NNP
10_1101-2021_02_08_430275	1	52	,	,	,
10_1101-2021_02_08_430275	1	53	Mountain	Mountain	NNP
10_1101-2021_02_08_430275	1	54	Horticultural	Horticultural	NNP
10_1101-2021_02_08_430275	1	55	Crops	Crops	NNP
10_1101-2021_02_08_430275	1	56	Research	Research	NNP
10_1101-2021_02_08_430275	1	57	and	and	CC
10_1101-2021_02_08_430275	1	58	Extension	Extension	NNP
10_1101-2021_02_08_430275	1	59	Center	Center	NNP
10_1101-2021_02_08_430275	1	60	,	,	,
10_1101-2021_02_08_430275	1	61	455	455	CD
10_1101-2021_02_08_430275	1	62	Research	Research	NNP
10_1101-2021_02_08_430275	1	63	Drive	Drive	NNP
10_1101-2021_02_08_430275	1	64	,	,	,
10_1101-2021_02_08_430275	1	65	Mills	Mills	NNP
10_1101-2021_02_08_430275	1	66	River	River	NNP
10_1101-2021_02_08_430275	1	67	,	,	,
10_1101-2021_02_08_430275	1	68	NC	NC	NNP
10_1101-2021_02_08_430275	1	69	28759	28759	CD
10_1101-2021_02_08_430275	1	70	,	,	,
10_1101-2021_02_08_430275	1	71	USA	USA	NNP
10_1101-2021_02_08_430275	1	72	This	this	DT
10_1101-2021_02_08_430275	1	73	manuscript	manuscript	NN
10_1101-2021_02_08_430275	1	74	was	be	VBD
10_1101-2021_02_08_430275	1	75	compiled	compile	VBN
10_1101-2021_02_08_430275	1	76	on	on	IN
10_1101-2021_02_08_430275	1	77	November	November	NNP
10_1101-2021_02_08_430275	1	78	24	24	CD
10_1101-2021_02_08_430275	1	79	,	,	,
10_1101-2021_02_08_430275	1	80	2020	2020	CD
10_1101-2021_02_08_430275	1	81	The	the	DT
10_1101-2021_02_08_430275	1	82	genomic	genomic	JJ
10_1101-2021_02_08_430275	1	83	region(s	region(s	NN
10_1101-2021_02_08_430275	1	84	)	)	-RRB-
10_1101-2021_02_08_430275	1	85	that	that	WDT
10_1101-2021_02_08_430275	1	86	controls	control	VBZ
10_1101-2021_02_08_430275	1	87	a	a	DT
10_1101-2021_02_08_430275	1	88	trait	trait	NN
10_1101-2021_02_08_430275	1	89	of	of	IN
10_1101-2021_02_08_430275	1	90	interest	interest	NN
10_1101-2021_02_08_430275	1	91	can	can	MD
10_1101-2021_02_08_430275	1	92	be	be	VB
10_1101-2021_02_08_430275	1	93	rapidly	rapidly	RB
10_1101-2021_02_08_430275	1	94	identified	identify	VBN
10_1101-2021_02_08_430275	1	95	using	use	VBG
10_1101-2021_02_08_430275	1	96	BSA	BSA	NNP
10_1101-2021_02_08_430275	1	97	-	-	HYPH
10_1101-2021_02_08_430275	1	98	Seq	Seq	NNP
10_1101-2021_02_08_430275	1	99	,	,	,
10_1101-2021_02_08_430275	1	100	a	a	DT
10_1101-2021_02_08_430275	1	101	technology	technology	NN
10_1101-2021_02_08_430275	1	102	in	in	IN
10_1101-2021_02_08_430275	1	103	which	which	WDT
10_1101-2021_02_08_430275	1	104	next	next	JJ
10_1101-2021_02_08_430275	1	105	-	-	HYPH
10_1101-2021_02_08_430275	1	106	generation	generation	NN
10_1101-2021_02_08_430275	1	107	se-	se-	NN
10_1101-2021_02_08_430275	1	108	quencing	quencing	NN
10_1101-2021_02_08_430275	1	109	(	(	-LRB-
10_1101-2021_02_08_430275	1	110	NGS	NGS	NNP
10_1101-2021_02_08_430275	1	111	)	)	-RRB-
10_1101-2021_02_08_430275	1	112	is	be	VBZ
10_1101-2021_02_08_430275	1	113	applied	apply	VBN
10_1101-2021_02_08_430275	1	114	to	to	IN
10_1101-2021_02_08_430275	1	115	bulked	bulk	VBN
10_1101-2021_02_08_430275	1	116	segregant	segregant	JJ
10_1101-2021_02_08_430275	1	117	analysis	analysis	NN
10_1101-2021_02_08_430275	1	118	(	(	-LRB-
10_1101-2021_02_08_430275	1	119	BSA	BSA	NNP
10_1101-2021_02_08_430275	1	120	)	)	-RRB-
10_1101-2021_02_08_430275	1	121	.	.	.
10_1101-2021_02_08_430275	2	1	We	-PRON-	PRP
10_1101-2021_02_08_430275	2	2	recently	recently	RB
10_1101-2021_02_08_430275	2	3	developed	develop	VBD
10_1101-2021_02_08_430275	2	4	the	the	DT
10_1101-2021_02_08_430275	2	5	significant	significant	JJ
10_1101-2021_02_08_430275	2	6	structural	structural	JJ
10_1101-2021_02_08_430275	2	7	variant	variant	JJ
10_1101-2021_02_08_430275	2	8	method	method	NN
10_1101-2021_02_08_430275	2	9	for	for	IN
10_1101-2021_02_08_430275	2	10	BSA-	BSA-	NNP
10_1101-2021_02_08_430275	2	11	Seq	Seq	NNP
10_1101-2021_02_08_430275	2	12	data	data	NN
10_1101-2021_02_08_430275	2	13	analysis	analysis	NN
10_1101-2021_02_08_430275	2	14	that	that	WDT
10_1101-2021_02_08_430275	2	15	exhibits	exhibit	VBZ
10_1101-2021_02_08_430275	2	16	higher	high	JJR
10_1101-2021_02_08_430275	2	17	detection	detection	NN
10_1101-2021_02_08_430275	2	18	power	power	NN
10_1101-2021_02_08_430275	2	19	than	than	IN
10_1101-2021_02_08_430275	2	20	standard	standard	JJ
10_1101-2021_02_08_430275	2	21	BSA	BSA	NNP
10_1101-2021_02_08_430275	2	22	-	-	HYPH
10_1101-2021_02_08_430275	2	23	Seq	Seq	NNP
10_1101-2021_02_08_430275	2	24	analysis	analysis	NN
10_1101-2021_02_08_430275	2	25	methods	method	NNS
10_1101-2021_02_08_430275	2	26	.	.	.
10_1101-2021_02_08_430275	3	1	Our	-PRON-	PRP$
10_1101-2021_02_08_430275	3	2	original	original	JJ
10_1101-2021_02_08_430275	3	3	algorithm	algorithm	NN
10_1101-2021_02_08_430275	3	4	was	be	VBD
10_1101-2021_02_08_430275	3	5	developed	develop	VBN
10_1101-2021_02_08_430275	3	6	to	to	TO
10_1101-2021_02_08_430275	3	7	analyze	analyze	VB
10_1101-2021_02_08_430275	3	8	BSA	BSA	NNP
10_1101-2021_02_08_430275	3	9	-	-	HYPH
10_1101-2021_02_08_430275	3	10	Seq	seq	NN
10_1101-2021_02_08_430275	3	11	data	datum	NNS
10_1101-2021_02_08_430275	3	12	in	in	IN
10_1101-2021_02_08_430275	3	13	which	which	WDT
10_1101-2021_02_08_430275	3	14	genome	genome	JJ
10_1101-2021_02_08_430275	3	15	sequences	sequence	NNS
10_1101-2021_02_08_430275	3	16	of	of	IN
10_1101-2021_02_08_430275	3	17	one	one	CD
10_1101-2021_02_08_430275	3	18	par-	par-	NN
10_1101-2021_02_08_430275	3	19	ent	ent	NN
10_1101-2021_02_08_430275	3	20	served	serve	VBD
10_1101-2021_02_08_430275	3	21	as	as	IN
10_1101-2021_02_08_430275	3	22	the	the	DT
10_1101-2021_02_08_430275	3	23	reference	reference	NN
10_1101-2021_02_08_430275	3	24	sequences	sequence	VBZ
10_1101-2021_02_08_430275	3	25	in	in	IN
10_1101-2021_02_08_430275	3	26	genotype	genotype	NN
10_1101-2021_02_08_430275	3	27	calling	calling	NN
10_1101-2021_02_08_430275	3	28	,	,	,
10_1101-2021_02_08_430275	3	29	and	and	CC
10_1101-2021_02_08_430275	3	30	thus	thus	RB
10_1101-2021_02_08_430275	3	31	required	require	VBD
10_1101-2021_02_08_430275	3	32	the	the	DT
10_1101-2021_02_08_430275	3	33	availability	availability	NN
10_1101-2021_02_08_430275	3	34	of	of	IN
10_1101-2021_02_08_430275	3	35	high	high	JJ
10_1101-2021_02_08_430275	3	36	-	-	HYPH
10_1101-2021_02_08_430275	3	37	quality	quality	NN
10_1101-2021_02_08_430275	3	38	assembled	assemble	VBN
10_1101-2021_02_08_430275	3	39	parental	parental	JJ
10_1101-2021_02_08_430275	3	40	genome	genome	NN
10_1101-2021_02_08_430275	3	41	sequences	sequence	NNS
10_1101-2021_02_08_430275	3	42	.	.	.
10_1101-2021_02_08_430275	4	1	Here	here	RB
10_1101-2021_02_08_430275	4	2	we	-PRON-	PRP
10_1101-2021_02_08_430275	4	3	modified	modify	VBD
10_1101-2021_02_08_430275	4	4	the	the	DT
10_1101-2021_02_08_430275	4	5	original	original	JJ
10_1101-2021_02_08_430275	4	6	script	script	NN
10_1101-2021_02_08_430275	4	7	to	to	TO
10_1101-2021_02_08_430275	4	8	allow	allow	VB
10_1101-2021_02_08_430275	4	9	for	for	IN
10_1101-2021_02_08_430275	4	10	the	the	DT
10_1101-2021_02_08_430275	4	11	ef-	ef-	NN
10_1101-2021_02_08_430275	4	12	fective	fective	JJ
10_1101-2021_02_08_430275	4	13	detection	detection	NN
10_1101-2021_02_08_430275	4	14	of	of	IN
10_1101-2021_02_08_430275	4	15	the	the	DT
10_1101-2021_02_08_430275	4	16	genomic	genomic	JJ
10_1101-2021_02_08_430275	4	17	region	region	NN
10_1101-2021_02_08_430275	4	18	-	-	HYPH
10_1101-2021_02_08_430275	4	19	trait	trait	NN
10_1101-2021_02_08_430275	4	20	associations	association	NNS
10_1101-2021_02_08_430275	4	21	using	use	VBG
10_1101-2021_02_08_430275	4	22	only	only	JJ
10_1101-2021_02_08_430275	4	23	bulk	bulk	JJ
10_1101-2021_02_08_430275	4	24	genome	genome	JJ
10_1101-2021_02_08_430275	4	25	sequences	sequence	NNS
10_1101-2021_02_08_430275	4	26	.	.	.
10_1101-2021_02_08_430275	5	1	We	-PRON-	PRP
10_1101-2021_02_08_430275	5	2	analyzed	analyze	VBD
10_1101-2021_02_08_430275	5	3	a	a	DT
10_1101-2021_02_08_430275	5	4	public	public	JJ
10_1101-2021_02_08_430275	5	5	BSA	BSA	NNP
10_1101-2021_02_08_430275	5	6	-	-	HYPH
10_1101-2021_02_08_430275	5	7	Seq	Seq	NNP
10_1101-2021_02_08_430275	5	8	dataset	dataset	NN
10_1101-2021_02_08_430275	5	9	us-	us-	XX
10_1101-2021_02_08_430275	5	10	ing	e	VBG
10_1101-2021_02_08_430275	5	11	our	-PRON-	PRP$
10_1101-2021_02_08_430275	5	12	modified	modify	VBN
10_1101-2021_02_08_430275	5	13	method	method	NN
10_1101-2021_02_08_430275	5	14	and	and	CC
10_1101-2021_02_08_430275	5	15	the	the	DT
10_1101-2021_02_08_430275	5	16	standard	standard	JJ
10_1101-2021_02_08_430275	5	17	allele	allele	NNP
10_1101-2021_02_08_430275	5	18	frequency	frequency	NN
10_1101-2021_02_08_430275	5	19	and	and	CC
10_1101-2021_02_08_430275	5	20	G-	g-	JJ
10_1101-2021_02_08_430275	5	21	statistic	statistic	JJ
10_1101-2021_02_08_430275	5	22	methods	method	NNS
10_1101-2021_02_08_430275	5	23	with	with	IN
10_1101-2021_02_08_430275	5	24	and	and	CC
10_1101-2021_02_08_430275	5	25	without	without	IN
10_1101-2021_02_08_430275	5	26	the	the	DT
10_1101-2021_02_08_430275	5	27	aid	aid	NN
10_1101-2021_02_08_430275	5	28	of	of	IN
10_1101-2021_02_08_430275	5	29	the	the	DT
10_1101-2021_02_08_430275	5	30	parental	parental	JJ
10_1101-2021_02_08_430275	5	31	genome	genome	JJ
10_1101-2021_02_08_430275	5	32	sequences	sequence	NNS
10_1101-2021_02_08_430275	5	33	.	.	.
10_1101-2021_02_08_430275	6	1	Our	-PRON-	PRP$
10_1101-2021_02_08_430275	6	2	results	result	NNS
10_1101-2021_02_08_430275	6	3	demonstrate	demonstrate	VBP
10_1101-2021_02_08_430275	6	4	that	that	IN
10_1101-2021_02_08_430275	6	5	the	the	DT
10_1101-2021_02_08_430275	6	6	genomic	genomic	NN
10_1101-2021_02_08_430275	6	7	region(s	region(s	NNP
10_1101-2021_02_08_430275	6	8	)	)	-RRB-
10_1101-2021_02_08_430275	6	9	as-	as-	NNP
10_1101-2021_02_08_430275	6	10	sociated	sociate	VBD
10_1101-2021_02_08_430275	6	11	with	with	IN
10_1101-2021_02_08_430275	6	12	the	the	DT
10_1101-2021_02_08_430275	6	13	trait	trait	NN
10_1101-2021_02_08_430275	6	14	of	of	IN
10_1101-2021_02_08_430275	6	15	interest	interest	NN
10_1101-2021_02_08_430275	6	16	could	could	MD
10_1101-2021_02_08_430275	6	17	be	be	VB
10_1101-2021_02_08_430275	6	18	reliably	reliably	RB
10_1101-2021_02_08_430275	6	19	identified	identify	VBN
10_1101-2021_02_08_430275	6	20	only	only	RB
10_1101-2021_02_08_430275	6	21	via	via	IN
10_1101-2021_02_08_430275	6	22	the	the	DT
10_1101-2021_02_08_430275	6	23	significant	significant	JJ
10_1101-2021_02_08_430275	6	24	structural	structural	JJ
10_1101-2021_02_08_430275	6	25	variant	variant	JJ
10_1101-2021_02_08_430275	6	26	method	method	NN
10_1101-2021_02_08_430275	6	27	without	without	IN
10_1101-2021_02_08_430275	6	28	using	use	VBG
10_1101-2021_02_08_430275	6	29	the	the	DT
10_1101-2021_02_08_430275	6	30	parental	parental	JJ
10_1101-2021_02_08_430275	6	31	genome	genome	JJ
10_1101-2021_02_08_430275	6	32	sequences	sequence	NNS
10_1101-2021_02_08_430275	6	33	.	.	.
10_1101-2021_02_08_430275	7	1	1	1	CD
10_1101-2021_02_08_430275	7	2	2	2	CD
10_1101-2021_02_08_430275	7	3	3	3	CD
10_1101-2021_02_08_430275	7	4	4	4	CD
10_1101-2021_02_08_430275	7	5	5	5	CD
10_1101-2021_02_08_430275	7	6	6	6	CD
10_1101-2021_02_08_430275	7	7	7	7	CD
10_1101-2021_02_08_430275	7	8	8	8	CD
10_1101-2021_02_08_430275	7	9	9	9	CD
10_1101-2021_02_08_430275	7	10	10	10	CD
10_1101-2021_02_08_430275	7	11	11	11	CD
10_1101-2021_02_08_430275	7	12	12	12	CD
10_1101-2021_02_08_430275	7	13	13	13	CD
10_1101-2021_02_08_430275	7	14	14	14	CD
10_1101-2021_02_08_430275	7	15	15	15	CD
10_1101-2021_02_08_430275	7	16	16	16	CD
10_1101-2021_02_08_430275	7	17	17	17	CD
10_1101-2021_02_08_430275	7	18	18	18	CD
10_1101-2021_02_08_430275	7	19	BSA	BSA	NNP
10_1101-2021_02_08_430275	7	20	-	-	HYPH
10_1101-2021_02_08_430275	7	21	Seq	Seq	NNP
10_1101-2021_02_08_430275	7	22	|	|	NNP
10_1101-2021_02_08_430275	7	23	PyBSASeq	pybsaseq	CD
10_1101-2021_02_08_430275	7	24	|	|	NNP
10_1101-2021_02_08_430275	7	25	QTL	QTL	NNP
10_1101-2021_02_08_430275	7	26	|	|	CD
10_1101-2021_02_08_430275	7	27	genomic	genomic	JJ
10_1101-2021_02_08_430275	7	28	region	region	NN
10_1101-2021_02_08_430275	7	29	-	-	HYPH
10_1101-2021_02_08_430275	7	30	trait	trait	NN
10_1101-2021_02_08_430275	7	31	association	association	NN
10_1101-2021_02_08_430275	7	32	Bulked	bulked	JJ
10_1101-2021_02_08_430275	7	33	segregant	segregant	JJ
10_1101-2021_02_08_430275	7	34	analysis	analysis	NN
10_1101-2021_02_08_430275	7	35	(	(	-LRB-
10_1101-2021_02_08_430275	7	36	BSA	BSA	NNP
10_1101-2021_02_08_430275	7	37	)	)	-RRB-
10_1101-2021_02_08_430275	7	38	was	be	VBD
10_1101-2021_02_08_430275	7	39	developed	develop	VBN
10_1101-2021_02_08_430275	7	40	for	for	IN
10_1101-2021_02_08_430275	7	41	the1	the1	DT
10_1101-2021_02_08_430275	7	42	quick	quick	JJ
10_1101-2021_02_08_430275	7	43	identification	identification	NN
10_1101-2021_02_08_430275	7	44	of	of	IN
10_1101-2021_02_08_430275	7	45	genetic	genetic	JJ
10_1101-2021_02_08_430275	7	46	markers	marker	NNS
10_1101-2021_02_08_430275	7	47	associated	associate	VBN
10_1101-2021_02_08_430275	7	48	with	with	IN
10_1101-2021_02_08_430275	7	49	a2	a2	NNP
10_1101-2021_02_08_430275	7	50	trait	trait	NN
10_1101-2021_02_08_430275	7	51	of	of	IN
10_1101-2021_02_08_430275	7	52	interest	interest	NN
10_1101-2021_02_08_430275	7	53	(	(	-LRB-
10_1101-2021_02_08_430275	7	54	1	1	CD
10_1101-2021_02_08_430275	7	55	,	,	,
10_1101-2021_02_08_430275	7	56	2	2	CD
10_1101-2021_02_08_430275	7	57	)	)	-RRB-
10_1101-2021_02_08_430275	7	58	.	.	.
10_1101-2021_02_08_430275	8	1	For	for	IN
10_1101-2021_02_08_430275	8	2	a	a	DT
10_1101-2021_02_08_430275	8	3	particular	particular	JJ
10_1101-2021_02_08_430275	8	4	trait	trait	NN
10_1101-2021_02_08_430275	8	5	,	,	,
10_1101-2021_02_08_430275	8	6	two	two	CD
10_1101-2021_02_08_430275	8	7	groups	group	NNS
10_1101-2021_02_08_430275	8	8	of3	of3	VBP
10_1101-2021_02_08_430275	8	9	individuals	individual	NNS
10_1101-2021_02_08_430275	8	10	with	with	IN
10_1101-2021_02_08_430275	8	11	contrasting	contrast	VBG
10_1101-2021_02_08_430275	8	12	phenotypes	phenotype	NNS
10_1101-2021_02_08_430275	8	13	are	be	VBP
10_1101-2021_02_08_430275	8	14	selected	select	VBN
10_1101-2021_02_08_430275	8	15	from	from	IN
10_1101-2021_02_08_430275	8	16	a4	a4	NN
10_1101-2021_02_08_430275	8	17	segregating	segregate	VBG
10_1101-2021_02_08_430275	8	18	population	population	NN
10_1101-2021_02_08_430275	8	19	.	.	.
10_1101-2021_02_08_430275	9	1	Equal	equal	JJ
10_1101-2021_02_08_430275	9	2	amounts	amount	NNS
10_1101-2021_02_08_430275	9	3	of	of	IN
10_1101-2021_02_08_430275	9	4	DNA	dna	NN
10_1101-2021_02_08_430275	9	5	are	be	VBP
10_1101-2021_02_08_430275	9	6	pooled5	pooled5	NN
10_1101-2021_02_08_430275	9	7	from	from	IN
10_1101-2021_02_08_430275	9	8	each	each	DT
10_1101-2021_02_08_430275	9	9	individual	individual	NN
10_1101-2021_02_08_430275	9	10	within	within	IN
10_1101-2021_02_08_430275	9	11	a	a	DT
10_1101-2021_02_08_430275	9	12	group	group	NN
10_1101-2021_02_08_430275	9	13	.	.	.
10_1101-2021_02_08_430275	10	1	The	the	DT
10_1101-2021_02_08_430275	10	2	pooled	pool	VBN
10_1101-2021_02_08_430275	10	3	DNA	dna	NN
10_1101-2021_02_08_430275	10	4	samples6	samples6	NN
10_1101-2021_02_08_430275	10	5	are	be	VBP
10_1101-2021_02_08_430275	10	6	then	then	RB
10_1101-2021_02_08_430275	10	7	subjected	subject	VBN
10_1101-2021_02_08_430275	10	8	to	to	IN
10_1101-2021_02_08_430275	10	9	analysis	analysis	NN
10_1101-2021_02_08_430275	10	10	,	,	,
10_1101-2021_02_08_430275	10	11	such	such	JJ
10_1101-2021_02_08_430275	10	12	as	as	IN
10_1101-2021_02_08_430275	10	13	restriction	restriction	NN
10_1101-2021_02_08_430275	10	14	fragment7	fragment7	VBZ
10_1101-2021_02_08_430275	10	15	length	length	NN
10_1101-2021_02_08_430275	10	16	polymorphism	polymorphism	NN
10_1101-2021_02_08_430275	10	17	(	(	-LRB-
10_1101-2021_02_08_430275	10	18	RFLP	RFLP	NNP
10_1101-2021_02_08_430275	10	19	)	)	-RRB-
10_1101-2021_02_08_430275	10	20	or	or	CC
10_1101-2021_02_08_430275	10	21	random	random	JJ
10_1101-2021_02_08_430275	10	22	amplification	amplification	NN
10_1101-2021_02_08_430275	10	23	of	of	IN
10_1101-2021_02_08_430275	10	24	poly-8	poly-8	NNP
10_1101-2021_02_08_430275	10	25	morphic	morphic	JJ
10_1101-2021_02_08_430275	10	26	DNA	DNA	NNP
10_1101-2021_02_08_430275	10	27	(	(	-LRB-
10_1101-2021_02_08_430275	10	28	RAPD	RAPD	NNP
10_1101-2021_02_08_430275	10	29	)	)	-RRB-
10_1101-2021_02_08_430275	10	30	.	.	.
10_1101-2021_02_08_430275	11	1	Fragments	fragment	VBZ
10_1101-2021_02_08_430275	11	2	unique	unique	JJ
10_1101-2021_02_08_430275	11	3	to	to	IN
10_1101-2021_02_08_430275	11	4	either	either	DT
10_1101-2021_02_08_430275	11	5	group	group	NN
10_1101-2021_02_08_430275	11	6	are9	are9	JJ
10_1101-2021_02_08_430275	11	7	potential	potential	JJ
10_1101-2021_02_08_430275	11	8	genetic	genetic	JJ
10_1101-2021_02_08_430275	11	9	markers	marker	NNS
10_1101-2021_02_08_430275	11	10	that	that	WDT
10_1101-2021_02_08_430275	11	11	may	may	MD
10_1101-2021_02_08_430275	11	12	link	link	VB
10_1101-2021_02_08_430275	11	13	to	to	IN
10_1101-2021_02_08_430275	11	14	the	the	DT
10_1101-2021_02_08_430275	11	15	gene(s	gene(s	NNP
10_1101-2021_02_08_430275	11	16	)	)	-RRB-
10_1101-2021_02_08_430275	11	17	that10	that10	NNP
10_1101-2021_02_08_430275	11	18	control	control	NNP
10_1101-2021_02_08_430275	11	19	phenotypic	phenotypic	NNP
10_1101-2021_02_08_430275	11	20	expression	expression	NN
10_1101-2021_02_08_430275	11	21	for	for	IN
10_1101-2021_02_08_430275	11	22	the	the	DT
10_1101-2021_02_08_430275	11	23	trait	trait	NN
10_1101-2021_02_08_430275	11	24	of	of	IN
10_1101-2021_02_08_430275	11	25	interest	interest	NN
10_1101-2021_02_08_430275	11	26	.	.	.
10_1101-2021_02_08_430275	12	1	Can-11	can-11	JJ
10_1101-2021_02_08_430275	12	2	didate	didate	NN
10_1101-2021_02_08_430275	12	3	markers	marker	NNS
10_1101-2021_02_08_430275	12	4	are	be	VBP
10_1101-2021_02_08_430275	12	5	further	further	RB
10_1101-2021_02_08_430275	12	6	tested	test	VBN
10_1101-2021_02_08_430275	12	7	against	against	IN
10_1101-2021_02_08_430275	12	8	the	the	DT
10_1101-2021_02_08_430275	12	9	population	population	NN
10_1101-2021_02_08_430275	12	10	to12	to12	NNP
10_1101-2021_02_08_430275	12	11	verify	verify	VBP
10_1101-2021_02_08_430275	12	12	the	the	DT
10_1101-2021_02_08_430275	12	13	marker	marker	NN
10_1101-2021_02_08_430275	12	14	-	-	HYPH
10_1101-2021_02_08_430275	12	15	trait	trait	NN
10_1101-2021_02_08_430275	12	16	associations	association	NNS
10_1101-2021_02_08_430275	12	17	.	.	.
10_1101-2021_02_08_430275	13	1	With	with	IN
10_1101-2021_02_08_430275	13	2	the	the	DT
10_1101-2021_02_08_430275	13	3	recent	recent	JJ
10_1101-2021_02_08_430275	13	4	dramatic13	dramatic13	JJ
10_1101-2021_02_08_430275	13	5	reductions	reduction	NNS
10_1101-2021_02_08_430275	13	6	in	in	IN
10_1101-2021_02_08_430275	13	7	cost	cost	NN
10_1101-2021_02_08_430275	13	8	,	,	,
10_1101-2021_02_08_430275	13	9	next	next	JJ
10_1101-2021_02_08_430275	13	10	-	-	HYPH
10_1101-2021_02_08_430275	13	11	generation	generation	NN
10_1101-2021_02_08_430275	13	12	sequencing	sequencing	NN
10_1101-2021_02_08_430275	13	13	(	(	-LRB-
10_1101-2021_02_08_430275	13	14	NGS	NGS	NNP
10_1101-2021_02_08_430275	13	15	)	)	-RRB-
10_1101-2021_02_08_430275	13	16	has	have	VBZ
10_1101-2021_02_08_430275	13	17	been14	been14	VBN
10_1101-2021_02_08_430275	13	18	applied	apply	VBN
10_1101-2021_02_08_430275	13	19	to	to	IN
10_1101-2021_02_08_430275	13	20	more	more	JJR
10_1101-2021_02_08_430275	13	21	and	and	CC
10_1101-2021_02_08_430275	13	22	more	more	JJR
10_1101-2021_02_08_430275	13	23	BSA	BSA	NNP
10_1101-2021_02_08_430275	13	24	studies	study	NNS
10_1101-2021_02_08_430275	13	25	(	(	-LRB-
10_1101-2021_02_08_430275	13	26	3–7	3–7	CD
10_1101-2021_02_08_430275	13	27	)	)	-RRB-
10_1101-2021_02_08_430275	13	28	.	.	.
10_1101-2021_02_08_430275	14	1	This	this	DT
10_1101-2021_02_08_430275	14	2	new	new	JJ
10_1101-2021_02_08_430275	14	3	tech-15	tech-15	NN
10_1101-2021_02_08_430275	14	4	nology	nology	NN
10_1101-2021_02_08_430275	14	5	is	be	VBZ
10_1101-2021_02_08_430275	14	6	referred	refer	VBN
10_1101-2021_02_08_430275	14	7	to	to	IN
10_1101-2021_02_08_430275	14	8	as	as	IN
10_1101-2021_02_08_430275	14	9	BSA	BSA	NNP
10_1101-2021_02_08_430275	14	10	-	-	HYPH
10_1101-2021_02_08_430275	14	11	Seq	seq	NN
10_1101-2021_02_08_430275	14	12	.	.	.
10_1101-2021_02_08_430275	15	1	In	in	IN
10_1101-2021_02_08_430275	15	2	BSA	BSA	NNP
10_1101-2021_02_08_430275	15	3	-	-	HYPH
10_1101-2021_02_08_430275	15	4	Seq	Seq	NNP
10_1101-2021_02_08_430275	15	5	,	,	,
10_1101-2021_02_08_430275	15	6	pooled	pool	VBN
10_1101-2021_02_08_430275	15	7	DNA16	DNA16	NNP
10_1101-2021_02_08_430275	15	8	samples	sample	NNS
10_1101-2021_02_08_430275	15	9	are	be	VBP
10_1101-2021_02_08_430275	15	10	not	not	RB
10_1101-2021_02_08_430275	15	11	subjected	subject	VBN
10_1101-2021_02_08_430275	15	12	to	to	IN
10_1101-2021_02_08_430275	15	13	RFLP	RFLP	NNP
10_1101-2021_02_08_430275	15	14	/	/	SYM
10_1101-2021_02_08_430275	15	15	RAPD	RAPD	NNP
10_1101-2021_02_08_430275	15	16	analysis	analysis	NN
10_1101-2021_02_08_430275	15	17	,	,	,
10_1101-2021_02_08_430275	15	18	but	but	CC
10_1101-2021_02_08_430275	15	19	are17	are17	ADD
10_1101-2021_02_08_430275	15	20	directly	directly	RB
10_1101-2021_02_08_430275	15	21	sequenced	sequence	VBN
10_1101-2021_02_08_430275	15	22	instead	instead	RB
10_1101-2021_02_08_430275	15	23	.	.	.
10_1101-2021_02_08_430275	16	1	Genome	genome	JJ
10_1101-2021_02_08_430275	16	2	-	-	HYPH
10_1101-2021_02_08_430275	16	3	wide	wide	JJ
10_1101-2021_02_08_430275	16	4	structural	structural	JJ
10_1101-2021_02_08_430275	16	5	variants18	variants18	NNS
10_1101-2021_02_08_430275	16	6	between	between	IN
10_1101-2021_02_08_430275	16	7	bulks	bulk	NNS
10_1101-2021_02_08_430275	16	8	,	,	,
10_1101-2021_02_08_430275	16	9	such	such	JJ
10_1101-2021_02_08_430275	16	10	as	as	IN
10_1101-2021_02_08_430275	16	11	single	single	JJ
10_1101-2021_02_08_430275	16	12	nucleotide	nucleotide	JJ
10_1101-2021_02_08_430275	16	13	polymorphisms	polymorphism	NNS
10_1101-2021_02_08_430275	16	14	(	(	-LRB-
10_1101-2021_02_08_430275	16	15	SNP)19	snp)19	NN
10_1101-2021_02_08_430275	16	16	and	and	CC
10_1101-2021_02_08_430275	16	17	small	small	JJ
10_1101-2021_02_08_430275	16	18	insertions	insertion	NNS
10_1101-2021_02_08_430275	16	19	/	/	SYM
10_1101-2021_02_08_430275	16	20	deletions	deletion	NNS
10_1101-2021_02_08_430275	16	21	(	(	-LRB-
10_1101-2021_02_08_430275	16	22	InDel	InDel	NNP
10_1101-2021_02_08_430275	16	23	)	)	-RRB-
10_1101-2021_02_08_430275	16	24	,	,	,
10_1101-2021_02_08_430275	16	25	are	be	VBP
10_1101-2021_02_08_430275	16	26	identified	identify	VBN
10_1101-2021_02_08_430275	16	27	based20	based20	FW
10_1101-2021_02_08_430275	16	28	on	on	IN
10_1101-2021_02_08_430275	16	29	the	the	DT
10_1101-2021_02_08_430275	16	30	sequencing	sequencing	NN
10_1101-2021_02_08_430275	16	31	data	datum	NNS
10_1101-2021_02_08_430275	16	32	.	.	.
10_1101-2021_02_08_430275	17	1	Genomic	genomic	JJ
10_1101-2021_02_08_430275	17	2	regions	region	NNS
10_1101-2021_02_08_430275	17	3	linked	link	VBN
10_1101-2021_02_08_430275	17	4	to	to	IN
10_1101-2021_02_08_430275	17	5	the	the	DT
10_1101-2021_02_08_430275	17	6	trait-21	trait-21	NN
10_1101-2021_02_08_430275	17	7	controlling	control	VBG
10_1101-2021_02_08_430275	17	8	gene(s	gene(s	NNP
10_1101-2021_02_08_430275	17	9	)	)	-RRB-
10_1101-2021_02_08_430275	17	10	are	be	VBP
10_1101-2021_02_08_430275	17	11	then	then	RB
10_1101-2021_02_08_430275	17	12	identified	identify	VBN
10_1101-2021_02_08_430275	17	13	based	base	VBN
10_1101-2021_02_08_430275	17	14	on	on	IN
10_1101-2021_02_08_430275	17	15	the	the	DT
10_1101-2021_02_08_430275	17	16	enrichment22	enrichment22	NN
10_1101-2021_02_08_430275	17	17	of	of	IN
10_1101-2021_02_08_430275	17	18	the	the	DT
10_1101-2021_02_08_430275	17	19	SNP	SNP	NNP
10_1101-2021_02_08_430275	17	20	/	/	SYM
10_1101-2021_02_08_430275	17	21	InDel	InDel	NNP
10_1101-2021_02_08_430275	17	22	alleles	allele	NNS
10_1101-2021_02_08_430275	17	23	in	in	IN
10_1101-2021_02_08_430275	17	24	those	those	DT
10_1101-2021_02_08_430275	17	25	regions	region	NNS
10_1101-2021_02_08_430275	17	26	in	in	IN
10_1101-2021_02_08_430275	17	27	each	each	DT
10_1101-2021_02_08_430275	17	28	bulk	bulk	NN
10_1101-2021_02_08_430275	17	29	.	.	.
10_1101-2021_02_08_430275	18	1	The23	the23	NN
10_1101-2021_02_08_430275	18	2	time	time	NN
10_1101-2021_02_08_430275	18	3	-	-	HYPH
10_1101-2021_02_08_430275	18	4	consuming	consume	VBG
10_1101-2021_02_08_430275	18	5	and	and	CC
10_1101-2021_02_08_430275	18	6	labor	labor	NN
10_1101-2021_02_08_430275	18	7	-	-	HYPH
10_1101-2021_02_08_430275	18	8	intensive	intensive	JJ
10_1101-2021_02_08_430275	18	9	marker	marker	NN
10_1101-2021_02_08_430275	18	10	development	development	NN
10_1101-2021_02_08_430275	18	11	and24	and24	JJ
10_1101-2021_02_08_430275	18	12	genetic	genetic	JJ
10_1101-2021_02_08_430275	18	13	mapping	mapping	NN
10_1101-2021_02_08_430275	18	14	steps	step	NNS
10_1101-2021_02_08_430275	18	15	are	be	VBP
10_1101-2021_02_08_430275	18	16	eliminated	eliminate	VBN
10_1101-2021_02_08_430275	18	17	in	in	IN
10_1101-2021_02_08_430275	18	18	the	the	DT
10_1101-2021_02_08_430275	18	19	BSA	BSA	NNP
10_1101-2021_02_08_430275	18	20	-	-	HYPH
10_1101-2021_02_08_430275	18	21	Seq	Seq	NNP
10_1101-2021_02_08_430275	18	22	method.25	method.25	NNP
10_1101-2021_02_08_430275	18	23	Moreover	moreover	RB
10_1101-2021_02_08_430275	18	24	,	,	,
10_1101-2021_02_08_430275	18	25	SNPs	SNPs	NNPS
10_1101-2021_02_08_430275	18	26	/	/	SYM
10_1101-2021_02_08_430275	18	27	InDels	indel	NNS
10_1101-2021_02_08_430275	18	28	can	can	MD
10_1101-2021_02_08_430275	18	29	be	be	VB
10_1101-2021_02_08_430275	18	30	detected	detect	VBN
10_1101-2021_02_08_430275	18	31	genome	genome	NN
10_1101-2021_02_08_430275	18	32	-	-	HYPH
10_1101-2021_02_08_430275	18	33	wide	wide	JJ
10_1101-2021_02_08_430275	18	34	via	via	IN
10_1101-2021_02_08_430275	18	35	NGS,26	ngs,26	CD
10_1101-2021_02_08_430275	18	36	which	which	WDT
10_1101-2021_02_08_430275	18	37	allows	allow	VBZ
10_1101-2021_02_08_430275	18	38	for	for	IN
10_1101-2021_02_08_430275	18	39	the	the	DT
10_1101-2021_02_08_430275	18	40	reliable	reliable	JJ
10_1101-2021_02_08_430275	18	41	identification	identification	NN
10_1101-2021_02_08_430275	18	42	of	of	IN
10_1101-2021_02_08_430275	18	43	trait	trait	NN
10_1101-2021_02_08_430275	18	44	-	-	HYPH
10_1101-2021_02_08_430275	18	45	associated27	associated27	VBN
10_1101-2021_02_08_430275	18	46	genomic	genomic	JJ
10_1101-2021_02_08_430275	18	47	regions	region	NNS
10_1101-2021_02_08_430275	18	48	across	across	IN
10_1101-2021_02_08_430275	18	49	the	the	DT
10_1101-2021_02_08_430275	18	50	entire	entire	JJ
10_1101-2021_02_08_430275	18	51	genome.28	genome.28	NNP
10_1101-2021_02_08_430275	18	52	For	for	IN
10_1101-2021_02_08_430275	18	53	each	each	DT
10_1101-2021_02_08_430275	18	54	SNP	SNP	NNP
10_1101-2021_02_08_430275	18	55	/	/	SYM
10_1101-2021_02_08_430275	18	56	InDel	InDel	NNP
10_1101-2021_02_08_430275	18	57	in	in	IN
10_1101-2021_02_08_430275	18	58	a	a	DT
10_1101-2021_02_08_430275	18	59	BSA	BSA	NNP
10_1101-2021_02_08_430275	18	60	-	-	HYPH
10_1101-2021_02_08_430275	18	61	Seq	Seq	NNP
10_1101-2021_02_08_430275	18	62	dataset	dataset	NN
10_1101-2021_02_08_430275	18	63	,	,	,
10_1101-2021_02_08_430275	18	64	the	the	DT
10_1101-2021_02_08_430275	18	65	base	base	NN
10_1101-2021_02_08_430275	18	66	(	(	-LRB-
10_1101-2021_02_08_430275	18	67	or29	or29	NNP
10_1101-2021_02_08_430275	18	68	oligo	oligo	NNS
10_1101-2021_02_08_430275	18	69	in	in	IN
10_1101-2021_02_08_430275	18	70	the	the	DT
10_1101-2021_02_08_430275	18	71	case	case	NN
10_1101-2021_02_08_430275	18	72	of	of	IN
10_1101-2021_02_08_430275	18	73	an	an	DT
10_1101-2021_02_08_430275	18	74	InDel	InDel	NNP
10_1101-2021_02_08_430275	18	75	)	)	-RRB-
10_1101-2021_02_08_430275	18	76	that	that	DT
10_1101-2021_02_08_430275	18	77	is	be	VBZ
10_1101-2021_02_08_430275	18	78	the	the	DT
10_1101-2021_02_08_430275	18	79	same	same	JJ
10_1101-2021_02_08_430275	18	80	as	as	IN
10_1101-2021_02_08_430275	18	81	in	in	IN
10_1101-2021_02_08_430275	18	82	the	the	DT
10_1101-2021_02_08_430275	18	83	reference30	reference30	NNP
10_1101-2021_02_08_430275	18	84	genome	genome	NNP
10_1101-2021_02_08_430275	18	85	is	be	VBZ
10_1101-2021_02_08_430275	18	86	termed	term	VBN
10_1101-2021_02_08_430275	18	87	the	the	DT
10_1101-2021_02_08_430275	18	88	reference	reference	NN
10_1101-2021_02_08_430275	18	89	base	base	NN
10_1101-2021_02_08_430275	18	90	(	(	-LRB-
10_1101-2021_02_08_430275	18	91	REF	REF	NNP
10_1101-2021_02_08_430275	18	92	)	)	-RRB-
10_1101-2021_02_08_430275	18	93	,	,	,
10_1101-2021_02_08_430275	18	94	and	and	CC
10_1101-2021_02_08_430275	18	95	the	the	DT
10_1101-2021_02_08_430275	18	96	other31	other31	NNP
10_1101-2021_02_08_430275	18	97	base	base	NN
10_1101-2021_02_08_430275	18	98	is	be	VBZ
10_1101-2021_02_08_430275	18	99	termed	term	VBN
10_1101-2021_02_08_430275	18	100	the	the	DT
10_1101-2021_02_08_430275	18	101	alternative	alternative	JJ
10_1101-2021_02_08_430275	18	102	base	base	NN
10_1101-2021_02_08_430275	18	103	(	(	-LRB-
10_1101-2021_02_08_430275	18	104	ALT	ALT	NNP
10_1101-2021_02_08_430275	18	105	)	)	-RRB-
10_1101-2021_02_08_430275	18	106	.	.	.
10_1101-2021_02_08_430275	19	1	Because	because	IN
10_1101-2021_02_08_430275	19	2	each	each	DT
10_1101-2021_02_08_430275	19	3	bulk	bulk	NN
10_1101-2021_02_08_430275	19	4	32	32	CD
10_1101-2021_02_08_430275	19	5	contains	contain	VBZ
10_1101-2021_02_08_430275	19	6	many	many	JJ
10_1101-2021_02_08_430275	19	7	individuals	individual	NNS
10_1101-2021_02_08_430275	19	8	,	,	,
10_1101-2021_02_08_430275	19	9	the	the	DT
10_1101-2021_02_08_430275	19	10	vast	vast	JJ
10_1101-2021_02_08_430275	19	11	majority	majority	NN
10_1101-2021_02_08_430275	19	12	of	of	IN
10_1101-2021_02_08_430275	19	13	SNP	SNP	NNP
10_1101-2021_02_08_430275	19	14	loci	loci	NN
10_1101-2021_02_08_430275	19	15	in	in	IN
10_1101-2021_02_08_430275	19	16	33	33	CD
10_1101-2021_02_08_430275	19	17	the	the	DT
10_1101-2021_02_08_430275	19	18	dataset	dataset	NN
10_1101-2021_02_08_430275	19	19	have	have	VBP
10_1101-2021_02_08_430275	19	20	both	both	DT
10_1101-2021_02_08_430275	19	21	REF	REF	NNP
10_1101-2021_02_08_430275	19	22	and	and	CC
10_1101-2021_02_08_430275	19	23	ALT	ALT	NNP
10_1101-2021_02_08_430275	19	24	bases	basis	NNS
10_1101-2021_02_08_430275	19	25	.	.	.
10_1101-2021_02_08_430275	20	1	For	for	IN
10_1101-2021_02_08_430275	20	2	each	each	DT
10_1101-2021_02_08_430275	20	3	SNP	SNP	NNP
10_1101-2021_02_08_430275	20	4	,	,	,
10_1101-2021_02_08_430275	20	5	34	34	CD
10_1101-2021_02_08_430275	20	6	the	the	DT
10_1101-2021_02_08_430275	20	7	number	number	NN
10_1101-2021_02_08_430275	20	8	of	of	IN
10_1101-2021_02_08_430275	20	9	reads	read	NNS
10_1101-2021_02_08_430275	20	10	of	of	IN
10_1101-2021_02_08_430275	20	11	its	-PRON-	PRP$
10_1101-2021_02_08_430275	20	12	REF	REF	NNP
10_1101-2021_02_08_430275	20	13	/	/	SYM
10_1101-2021_02_08_430275	20	14	ALT	ALT	NNP
10_1101-2021_02_08_430275	20	15	alleles	allele	NNS
10_1101-2021_02_08_430275	20	16	is	be	VBZ
10_1101-2021_02_08_430275	20	17	termed	term	VBN
10_1101-2021_02_08_430275	20	18	allele	allele	NNP
10_1101-2021_02_08_430275	20	19	35	35	CD
10_1101-2021_02_08_430275	20	20	depth	depth	NN
10_1101-2021_02_08_430275	20	21	(	(	-LRB-
10_1101-2021_02_08_430275	20	22	AD	ad	NN
10_1101-2021_02_08_430275	20	23	)	)	-RRB-
10_1101-2021_02_08_430275	20	24	.	.	.
10_1101-2021_02_08_430275	21	1	Because	because	IN
10_1101-2021_02_08_430275	21	2	of	of	IN
10_1101-2021_02_08_430275	21	3	the	the	DT
10_1101-2021_02_08_430275	21	4	phenotypic	phenotypic	NN
10_1101-2021_02_08_430275	21	5	selection	selection	NN
10_1101-2021_02_08_430275	21	6	via	via	IN
10_1101-2021_02_08_430275	21	7	bulking	bulk	VBG
10_1101-2021_02_08_430275	21	8	,	,	,
10_1101-2021_02_08_430275	21	9	36	36	CD
10_1101-2021_02_08_430275	21	10	for	for	IN
10_1101-2021_02_08_430275	21	11	trait	trait	NN
10_1101-2021_02_08_430275	21	12	-	-	HYPH
10_1101-2021_02_08_430275	21	13	associated	associate	VBN
10_1101-2021_02_08_430275	21	14	SNPs	snp	NNS
10_1101-2021_02_08_430275	21	15	,	,	,
10_1101-2021_02_08_430275	21	16	the	the	DT
10_1101-2021_02_08_430275	21	17	ALT	ALT	NNP
10_1101-2021_02_08_430275	21	18	allele	allele	NNS
10_1101-2021_02_08_430275	21	19	should	should	MD
10_1101-2021_02_08_430275	21	20	be	be	VB
10_1101-2021_02_08_430275	21	21	enriched	enrich	VBN
10_1101-2021_02_08_430275	21	22	37	37	CD
10_1101-2021_02_08_430275	21	23	in	in	IN
10_1101-2021_02_08_430275	21	24	one	one	CD
10_1101-2021_02_08_430275	21	25	bulk	bulk	NN
10_1101-2021_02_08_430275	21	26	while	while	IN
10_1101-2021_02_08_430275	21	27	the	the	DT
10_1101-2021_02_08_430275	21	28	REF	REF	NNP
10_1101-2021_02_08_430275	21	29	allele	allele	NNS
10_1101-2021_02_08_430275	21	30	should	should	MD
10_1101-2021_02_08_430275	21	31	be	be	VB
10_1101-2021_02_08_430275	21	32	enriched	enrich	VBN
10_1101-2021_02_08_430275	21	33	in	in	IN
10_1101-2021_02_08_430275	21	34	the	the	DT
10_1101-2021_02_08_430275	21	35	38	38	CD
10_1101-2021_02_08_430275	21	36	other	other	JJ
10_1101-2021_02_08_430275	21	37	.	.	.
10_1101-2021_02_08_430275	22	1	However	however	RB
10_1101-2021_02_08_430275	22	2	,	,	,
10_1101-2021_02_08_430275	22	3	for	for	IN
10_1101-2021_02_08_430275	22	4	SNPs	snp	NNS
10_1101-2021_02_08_430275	22	5	not	not	RB
10_1101-2021_02_08_430275	22	6	associated	associate	VBN
10_1101-2021_02_08_430275	22	7	with	with	IN
10_1101-2021_02_08_430275	22	8	the	the	DT
10_1101-2021_02_08_430275	22	9	trait	trait	NN
10_1101-2021_02_08_430275	22	10	,	,	,
10_1101-2021_02_08_430275	22	11	both	both	CC
10_1101-2021_02_08_430275	22	12	39	39	CD
10_1101-2021_02_08_430275	22	13	ALT	ALT	NNP
10_1101-2021_02_08_430275	22	14	and	and	CC
10_1101-2021_02_08_430275	22	15	REF	REF	NNP
10_1101-2021_02_08_430275	22	16	alleles	allele	NNS
10_1101-2021_02_08_430275	22	17	would	would	MD
10_1101-2021_02_08_430275	22	18	be	be	VB
10_1101-2021_02_08_430275	22	19	randomly	randomly	RB
10_1101-2021_02_08_430275	22	20	segregated	segregate	VBN
10_1101-2021_02_08_430275	22	21	in	in	IN
10_1101-2021_02_08_430275	22	22	both	both	DT
10_1101-2021_02_08_430275	22	23	40	40	CD
10_1101-2021_02_08_430275	22	24	bulks	bulk	NNS
10_1101-2021_02_08_430275	22	25	,	,	,
10_1101-2021_02_08_430275	22	26	and	and	CC
10_1101-2021_02_08_430275	22	27	neither	neither	DT
10_1101-2021_02_08_430275	22	28	enriched	enrich	VBN
10_1101-2021_02_08_430275	22	29	in	in	IN
10_1101-2021_02_08_430275	22	30	either	either	DT
10_1101-2021_02_08_430275	22	31	bulk	bulk	NN
10_1101-2021_02_08_430275	22	32	.	.	.
10_1101-2021_02_08_430275	23	1	Hence	hence	RB
10_1101-2021_02_08_430275	23	2	these	these	DT
10_1101-2021_02_08_430275	23	3	four	four	CD
10_1101-2021_02_08_430275	23	4	41	41	CD
10_1101-2021_02_08_430275	23	5	AD	ad	NN
10_1101-2021_02_08_430275	23	6	values	value	NNS
10_1101-2021_02_08_430275	23	7	can	can	MD
10_1101-2021_02_08_430275	23	8	be	be	VB
10_1101-2021_02_08_430275	23	9	used	use	VBN
10_1101-2021_02_08_430275	23	10	to	to	TO
10_1101-2021_02_08_430275	23	11	assess	assess	VB
10_1101-2021_02_08_430275	23	12	how	how	WRB
10_1101-2021_02_08_430275	23	13	likely	likely	RB
10_1101-2021_02_08_430275	23	14	a	a	DT
10_1101-2021_02_08_430275	23	15	SNP	SNP	NNP
10_1101-2021_02_08_430275	23	16	/	/	SYM
10_1101-2021_02_08_430275	23	17	InDel	InDel	NNP
10_1101-2021_02_08_430275	23	18	is	be	VBZ
10_1101-2021_02_08_430275	23	19	42	42	CD
10_1101-2021_02_08_430275	23	20	associated	associate	VBN
10_1101-2021_02_08_430275	23	21	with	with	IN
10_1101-2021_02_08_430275	23	22	the	the	DT
10_1101-2021_02_08_430275	23	23	trait	trait	NN
10_1101-2021_02_08_430275	23	24	.	.	.
10_1101-2021_02_08_430275	24	1	43	43	CD
10_1101-2021_02_08_430275	24	2	We	-PRON-	PRP
10_1101-2021_02_08_430275	24	3	have	have	VBP
10_1101-2021_02_08_430275	24	4	previously	previously	RB
10_1101-2021_02_08_430275	24	5	developed	develop	VBN
10_1101-2021_02_08_430275	24	6	the	the	DT
10_1101-2021_02_08_430275	24	7	significant	significant	JJ
10_1101-2021_02_08_430275	24	8	structural	structural	JJ
10_1101-2021_02_08_430275	24	9	44	44	CD
10_1101-2021_02_08_430275	24	10	variant	variant	JJ
10_1101-2021_02_08_430275	24	11	method	method	NN
10_1101-2021_02_08_430275	24	12	for	for	IN
10_1101-2021_02_08_430275	24	13	BSA	BSA	NNP
10_1101-2021_02_08_430275	24	14	-	-	HYPH
10_1101-2021_02_08_430275	24	15	Seq	Seq	NNP
10_1101-2021_02_08_430275	24	16	data	data	NN
10_1101-2021_02_08_430275	24	17	analysis	analysis	NN
10_1101-2021_02_08_430275	24	18	(	(	-LRB-
10_1101-2021_02_08_430275	24	19	8)	8)	CD
10_1101-2021_02_08_430275	24	20	.	.	.
10_1101-2021_02_08_430275	25	1	In	in	IN
10_1101-2021_02_08_430275	25	2	this	this	DT
10_1101-2021_02_08_430275	25	3	method	method	NN
10_1101-2021_02_08_430275	25	4	,	,	,
10_1101-2021_02_08_430275	25	5	45	45	CD
10_1101-2021_02_08_430275	25	6	a	a	DT
10_1101-2021_02_08_430275	25	7	SNP	SNP	NNP
10_1101-2021_02_08_430275	25	8	/	/	SYM
10_1101-2021_02_08_430275	25	9	InDel	InDel	NNP
10_1101-2021_02_08_430275	25	10	is	be	VBZ
10_1101-2021_02_08_430275	25	11	assessed	assess	VBN
10_1101-2021_02_08_430275	25	12	with	with	IN
10_1101-2021_02_08_430275	25	13	Fisher	Fisher	NNP
10_1101-2021_02_08_430275	25	14	’s	’s	POS
10_1101-2021_02_08_430275	25	15	exact	exact	JJ
10_1101-2021_02_08_430275	25	16	test	test	NN
10_1101-2021_02_08_430275	25	17	using	use	VBG
10_1101-2021_02_08_430275	25	18	the	the	DT
10_1101-2021_02_08_430275	25	19	AD	ad	NN
10_1101-2021_02_08_430275	25	20	46	46	CD
10_1101-2021_02_08_430275	25	21	values	value	NNS
10_1101-2021_02_08_430275	25	22	of	of	IN
10_1101-2021_02_08_430275	25	23	both	both	DT
10_1101-2021_02_08_430275	25	24	bulks	bulk	NNS
10_1101-2021_02_08_430275	25	25	.	.	.
10_1101-2021_02_08_430275	26	1	A	a	DT
10_1101-2021_02_08_430275	26	2	SNP	SNP	NNP
10_1101-2021_02_08_430275	26	3	/	/	SYM
10_1101-2021_02_08_430275	26	4	InDel	InDel	NNP
10_1101-2021_02_08_430275	26	5	is	be	VBZ
10_1101-2021_02_08_430275	26	6	considered	consider	VBN
10_1101-2021_02_08_430275	26	7	significant	significant	JJ
10_1101-2021_02_08_430275	26	8	47	47	CD
10_1101-2021_02_08_430275	26	9	if	if	IN
10_1101-2021_02_08_430275	26	10	the	the	DT
10_1101-2021_02_08_430275	26	11	P	p	NN
10_1101-2021_02_08_430275	26	12	-	-	HYPH
10_1101-2021_02_08_430275	26	13	value	value	NN
10_1101-2021_02_08_430275	26	14	of	of	IN
10_1101-2021_02_08_430275	26	15	Fisher	Fisher	NNP
10_1101-2021_02_08_430275	26	16	’s	’s	POS
10_1101-2021_02_08_430275	26	17	exact	exact	JJ
10_1101-2021_02_08_430275	26	18	test	test	NN
10_1101-2021_02_08_430275	26	19	is	be	VBZ
10_1101-2021_02_08_430275	26	20	lower	low	JJR
10_1101-2021_02_08_430275	26	21	than	than	IN
10_1101-2021_02_08_430275	26	22	a	a	DT
10_1101-2021_02_08_430275	26	23	specific	specific	JJ
10_1101-2021_02_08_430275	26	24	48	48	CD
10_1101-2021_02_08_430275	26	25	cut	cut	VBN
10_1101-2021_02_08_430275	26	26	-	-	HYPH
10_1101-2021_02_08_430275	26	27	off	off	RP
10_1101-2021_02_08_430275	26	28	value	value	NN
10_1101-2021_02_08_430275	26	29	,	,	,
10_1101-2021_02_08_430275	26	30	e.g.	e.g.	RB
10_1101-2021_02_08_430275	26	31	,	,	,
10_1101-2021_02_08_430275	26	32	0.01	0.01	CD
10_1101-2021_02_08_430275	26	33	.	.	.
10_1101-2021_02_08_430275	27	1	A	a	DT
10_1101-2021_02_08_430275	27	2	genomic	genomic	JJ
10_1101-2021_02_08_430275	27	3	region	region	NN
10_1101-2021_02_08_430275	27	4	normally	normally	RB
10_1101-2021_02_08_430275	27	5	contains	contain	VBZ
10_1101-2021_02_08_430275	27	6	49	49	CD
10_1101-2021_02_08_430275	27	7	many	many	JJ
10_1101-2021_02_08_430275	27	8	SNPs	snp	NNS
10_1101-2021_02_08_430275	27	9	/	/	SYM
10_1101-2021_02_08_430275	27	10	InDels	indel	NNS
10_1101-2021_02_08_430275	27	11	.	.	.
10_1101-2021_02_08_430275	28	1	The	the	DT
10_1101-2021_02_08_430275	28	2	ratio	ratio	NN
10_1101-2021_02_08_430275	28	3	of	of	IN
10_1101-2021_02_08_430275	28	4	the	the	DT
10_1101-2021_02_08_430275	28	5	significant	significant	JJ
10_1101-2021_02_08_430275	28	6	structural	structural	JJ
10_1101-2021_02_08_430275	28	7	50	50	CD
10_1101-2021_02_08_430275	28	8	variants	variant	NNS
10_1101-2021_02_08_430275	28	9	to	to	IN
10_1101-2021_02_08_430275	28	10	the	the	DT
10_1101-2021_02_08_430275	28	11	total	total	JJ
10_1101-2021_02_08_430275	28	12	structural	structural	JJ
10_1101-2021_02_08_430275	28	13	variants	variant	NNS
10_1101-2021_02_08_430275	28	14	is	be	VBZ
10_1101-2021_02_08_430275	28	15	used	use	VBN
10_1101-2021_02_08_430275	28	16	to	to	TO
10_1101-2021_02_08_430275	28	17	judge	judge	VB
10_1101-2021_02_08_430275	28	18	if	if	IN
10_1101-2021_02_08_430275	28	19	51	51	CD
10_1101-2021_02_08_430275	28	20	this	this	DT
10_1101-2021_02_08_430275	28	21	genomic	genomic	JJ
10_1101-2021_02_08_430275	28	22	region	region	NN
10_1101-2021_02_08_430275	28	23	is	be	VBZ
10_1101-2021_02_08_430275	28	24	associated	associate	VBN
10_1101-2021_02_08_430275	28	25	with	with	IN
10_1101-2021_02_08_430275	28	26	the	the	DT
10_1101-2021_02_08_430275	28	27	trait	trait	NN
10_1101-2021_02_08_430275	28	28	of	of	IN
10_1101-2021_02_08_430275	28	29	interest	interest	NN
10_1101-2021_02_08_430275	28	30	.	.	.
10_1101-2021_02_08_430275	29	1	52	52	CD
10_1101-2021_02_08_430275	29	2	We	-PRON-	PRP
10_1101-2021_02_08_430275	29	3	tested	test	VBD
10_1101-2021_02_08_430275	29	4	this	this	DT
10_1101-2021_02_08_430275	29	5	method	method	NN
10_1101-2021_02_08_430275	29	6	using	use	VBG
10_1101-2021_02_08_430275	29	7	the	the	DT
10_1101-2021_02_08_430275	29	8	BSA	BSA	NNP
10_1101-2021_02_08_430275	29	9	-	-	HYPH
10_1101-2021_02_08_430275	29	10	Seq	Seq	NNP
10_1101-2021_02_08_430275	29	11	data	datum	NNS
10_1101-2021_02_08_430275	29	12	of	of	IN
10_1101-2021_02_08_430275	29	13	a	a	DT
10_1101-2021_02_08_430275	29	14	rice	rice	NN
10_1101-2021_02_08_430275	29	15	cold-	cold-	NN
10_1101-2021_02_08_430275	29	16	53	53	CD
10_1101-2021_02_08_430275	29	17	tolerance	tolerance	NN
10_1101-2021_02_08_430275	29	18	study	study	NN
10_1101-2021_02_08_430275	29	19	(	(	-LRB-
10_1101-2021_02_08_430275	29	20	9	9	CD
10_1101-2021_02_08_430275	29	21	)	)	-RRB-
10_1101-2021_02_08_430275	29	22	.	.	.
10_1101-2021_02_08_430275	30	1	One	one	CD
10_1101-2021_02_08_430275	30	2	of	of	IN
10_1101-2021_02_08_430275	30	3	the	the	DT
10_1101-2021_02_08_430275	30	4	parents	parent	NNS
10_1101-2021_02_08_430275	30	5	in	in	IN
10_1101-2021_02_08_430275	30	6	this	this	DT
10_1101-2021_02_08_430275	30	7	study	study	NN
10_1101-2021_02_08_430275	30	8	was	be	VBD
10_1101-2021_02_08_430275	30	9	rice	rice	NN
10_1101-2021_02_08_430275	30	10	54	54	CD
10_1101-2021_02_08_430275	30	11	cultivar	cultivar	JJ
10_1101-2021_02_08_430275	30	12	Oryza	Oryza	NNPS
10_1101-2021_02_08_430275	30	13	sativa	sativa	NN
10_1101-2021_02_08_430275	30	14	ssp	ssp	VB
10_1101-2021_02_08_430275	30	15	.	.	.
10_1101-2021_02_08_430275	31	1	japonica	japonica	NNP
10_1101-2021_02_08_430275	31	2	cv	cv	NNP
10_1101-2021_02_08_430275	31	3	.	.	.
10_1101-2021_02_08_430275	32	1	Nipponbare	nipponbare	NN
10_1101-2021_02_08_430275	32	2	.	.	.
10_1101-2021_02_08_430275	33	1	Its	-PRON-	PRP$
10_1101-2021_02_08_430275	33	2	high-	high-	JJ
10_1101-2021_02_08_430275	33	3	55	55	CD
10_1101-2021_02_08_430275	33	4	quality	quality	NN
10_1101-2021_02_08_430275	33	5	assembled	assemble	VBN
10_1101-2021_02_08_430275	33	6	genome	genome	JJ
10_1101-2021_02_08_430275	33	7	sequences	sequence	NNS
10_1101-2021_02_08_430275	33	8	were	be	VBD
10_1101-2021_02_08_430275	33	9	used	use	VBN
10_1101-2021_02_08_430275	33	10	as	as	IN
10_1101-2021_02_08_430275	33	11	the	the	DT
10_1101-2021_02_08_430275	33	12	reference	reference	NN
10_1101-2021_02_08_430275	33	13	56	56	CD
10_1101-2021_02_08_430275	33	14	sequences	sequence	NNS
10_1101-2021_02_08_430275	33	15	for	for	IN
10_1101-2021_02_08_430275	33	16	SNP	SNP	NNP
10_1101-2021_02_08_430275	33	17	/	/	SYM
10_1101-2021_02_08_430275	33	18	InDel	InDel	NNP
10_1101-2021_02_08_430275	33	19	calling	call	VBG
10_1101-2021_02_08_430275	33	20	as	as	RB
10_1101-2021_02_08_430275	33	21	well	well	RB
10_1101-2021_02_08_430275	33	22	,	,	,
10_1101-2021_02_08_430275	33	23	which	which	WDT
10_1101-2021_02_08_430275	33	24	makes	make	VBZ
10_1101-2021_02_08_430275	33	25	the	the	DT
10_1101-2021_02_08_430275	33	26	57	57	CD
10_1101-2021_02_08_430275	33	27	genotype	genotype	NN
10_1101-2021_02_08_430275	33	28	calling	calling	NN
10_1101-2021_02_08_430275	33	29	and	and	CC
10_1101-2021_02_08_430275	33	30	SNP	SNP	NNP
10_1101-2021_02_08_430275	33	31	/	/	SYM
10_1101-2021_02_08_430275	33	32	InDel	InDel	NNP
10_1101-2021_02_08_430275	33	33	filtering	filter	VBG
10_1101-2021_02_08_430275	33	34	very	very	RB
10_1101-2021_02_08_430275	33	35	straightforward	straightforward	RB
10_1101-2021_02_08_430275	33	36	:	:	:
10_1101-2021_02_08_430275	33	37	58	58	CD
10_1101-2021_02_08_430275	33	38	any	any	DT
10_1101-2021_02_08_430275	33	39	locus	locus	NN
10_1101-2021_02_08_430275	33	40	in	in	IN
10_1101-2021_02_08_430275	33	41	any	any	DT
10_1101-2021_02_08_430275	33	42	bulk	bulk	NN
10_1101-2021_02_08_430275	33	43	that	that	WDT
10_1101-2021_02_08_430275	33	44	is	be	VBZ
10_1101-2021_02_08_430275	33	45	different	different	JJ
10_1101-2021_02_08_430275	33	46	from	from	IN
10_1101-2021_02_08_430275	33	47	the	the	DT
10_1101-2021_02_08_430275	33	48	REF	REF	NNP
10_1101-2021_02_08_430275	33	49	allele	allele	NNP
10_1101-2021_02_08_430275	33	50	is	be	VBZ
10_1101-2021_02_08_430275	33	51	59	59	CD
10_1101-2021_02_08_430275	33	52	a	a	DT
10_1101-2021_02_08_430275	33	53	valid	valid	JJ
10_1101-2021_02_08_430275	33	54	SNP	SNP	NNP
10_1101-2021_02_08_430275	33	55	/	/	SYM
10_1101-2021_02_08_430275	33	56	InDel	InDel	NNP
10_1101-2021_02_08_430275	33	57	(	(	-LRB-
10_1101-2021_02_08_430275	33	58	8)	8)	CD
10_1101-2021_02_08_430275	33	59	.	.	.
10_1101-2021_02_08_430275	34	1	60	60	CD
10_1101-2021_02_08_430275	34	2	Only	only	JJ
10_1101-2021_02_08_430275	34	3	high	high	JJ
10_1101-2021_02_08_430275	34	4	-	-	HYPH
10_1101-2021_02_08_430275	34	5	quality	quality	NN
10_1101-2021_02_08_430275	34	6	assembled	assemble	VBN
10_1101-2021_02_08_430275	34	7	genome	genome	JJ
10_1101-2021_02_08_430275	34	8	sequences	sequence	NNS
10_1101-2021_02_08_430275	34	9	can	can	MD
10_1101-2021_02_08_430275	34	10	serve	serve	VB
10_1101-2021_02_08_430275	34	11	as	as	IN
10_1101-2021_02_08_430275	34	12	61	61	CD
10_1101-2021_02_08_430275	34	13	the	the	DT
10_1101-2021_02_08_430275	34	14	reference	reference	NN
10_1101-2021_02_08_430275	34	15	sequences	sequence	NNS
10_1101-2021_02_08_430275	34	16	in	in	IN
10_1101-2021_02_08_430275	34	17	genotype	genotype	NN
10_1101-2021_02_08_430275	34	18	calling	calling	NN
10_1101-2021_02_08_430275	34	19	,	,	,
10_1101-2021_02_08_430275	34	20	an	an	DT
10_1101-2021_02_08_430275	34	21	essential	essential	JJ
10_1101-2021_02_08_430275	34	22	step	step	NN
10_1101-2021_02_08_430275	34	23	62	62	CD
10_1101-2021_02_08_430275	34	24	in	in	IN
10_1101-2021_02_08_430275	34	25	BSA	BSA	NNP
10_1101-2021_02_08_430275	34	26	-	-	HYPH
10_1101-2021_02_08_430275	34	27	Seq	Seq	NNP
10_1101-2021_02_08_430275	34	28	data	data	NN
10_1101-2021_02_08_430275	34	29	analysis	analysis	NN
10_1101-2021_02_08_430275	34	30	.	.	.
10_1101-2021_02_08_430275	35	1	For	for	IN
10_1101-2021_02_08_430275	35	2	most	most	JJS
10_1101-2021_02_08_430275	35	3	species	specie	NNS
10_1101-2021_02_08_430275	35	4	,	,	,
10_1101-2021_02_08_430275	35	5	however	however	RB
10_1101-2021_02_08_430275	35	6	,	,	,
10_1101-2021_02_08_430275	35	7	such	such	JJ
10_1101-2021_02_08_430275	35	8	63	63	CD
10_1101-2021_02_08_430275	35	9	sequences	sequence	NNS
10_1101-2021_02_08_430275	35	10	are	be	VBP
10_1101-2021_02_08_430275	35	11	available	available	JJ
10_1101-2021_02_08_430275	35	12	for	for	IN
10_1101-2021_02_08_430275	35	13	only	only	RB
10_1101-2021_02_08_430275	35	14	a	a	DT
10_1101-2021_02_08_430275	35	15	single	single	JJ
10_1101-2021_02_08_430275	35	16	or	or	CC
10_1101-2021_02_08_430275	35	17	limited	limited	JJ
10_1101-2021_02_08_430275	35	18	number	number	NN
10_1101-2021_02_08_430275	35	19	of	of	IN
10_1101-2021_02_08_430275	35	20	64	64	CD
10_1101-2021_02_08_430275	35	21	lines	line	NNS
10_1101-2021_02_08_430275	35	22	.	.	.
10_1101-2021_02_08_430275	36	1	If	if	IN
10_1101-2021_02_08_430275	36	2	lines	line	NNS
10_1101-2021_02_08_430275	36	3	without	without	IN
10_1101-2021_02_08_430275	36	4	high	high	JJ
10_1101-2021_02_08_430275	36	5	-	-	HYPH
10_1101-2021_02_08_430275	36	6	quality	quality	NN
10_1101-2021_02_08_430275	36	7	assembled	assemble	VBN
10_1101-2021_02_08_430275	36	8	genome	genome	JJ
10_1101-2021_02_08_430275	36	9	sequences	sequence	NNS
10_1101-2021_02_08_430275	36	10	65	65	CD
10_1101-2021_02_08_430275	36	11	are	be	VBP
10_1101-2021_02_08_430275	36	12	used	use	VBN
10_1101-2021_02_08_430275	36	13	as	as	IN
10_1101-2021_02_08_430275	36	14	the	the	DT
10_1101-2021_02_08_430275	36	15	parents	parent	NNS
10_1101-2021_02_08_430275	36	16	in	in	IN
10_1101-2021_02_08_430275	36	17	BSA	BSA	NNP
10_1101-2021_02_08_430275	36	18	-	-	HYPH
10_1101-2021_02_08_430275	36	19	Seq	Seq	NNP
10_1101-2021_02_08_430275	36	20	studies	study	NNS
10_1101-2021_02_08_430275	36	21	,	,	,
10_1101-2021_02_08_430275	36	22	the	the	DT
10_1101-2021_02_08_430275	36	23	parental	parental	JJ
10_1101-2021_02_08_430275	36	24	66	66	CD
10_1101-2021_02_08_430275	36	25	genomes	genome	NNS
10_1101-2021_02_08_430275	36	26	are	be	VBP
10_1101-2021_02_08_430275	36	27	often	often	RB
10_1101-2021_02_08_430275	36	28	sequenced	sequence	VBN
10_1101-2021_02_08_430275	36	29	via	via	IN
10_1101-2021_02_08_430275	36	30	NGS	NGS	NNP
10_1101-2021_02_08_430275	36	31	for	for	IN
10_1101-2021_02_08_430275	36	32	the	the	DT
10_1101-2021_02_08_430275	36	33	determination	determination	NN
10_1101-2021_02_08_430275	36	34	67	67	CD
10_1101-2021_02_08_430275	36	35	Significance	Significance	NNP
10_1101-2021_02_08_430275	36	36	Statement	Statement	NNP
10_1101-2021_02_08_430275	36	37	BSA	BSA	NNP
10_1101-2021_02_08_430275	36	38	-	-	HYPH
10_1101-2021_02_08_430275	36	39	Seq	Seq	NNP
10_1101-2021_02_08_430275	36	40	can	can	MD
10_1101-2021_02_08_430275	36	41	be	be	VB
10_1101-2021_02_08_430275	36	42	utilized	utilize	VBN
10_1101-2021_02_08_430275	36	43	to	to	TO
10_1101-2021_02_08_430275	36	44	rapidly	rapidly	RB
10_1101-2021_02_08_430275	36	45	identify	identify	VB
10_1101-2021_02_08_430275	36	46	structural	structural	JJ
10_1101-2021_02_08_430275	36	47	variant-	variant-	NNP
10_1101-2021_02_08_430275	36	48	trait	trait	NNP
10_1101-2021_02_08_430275	36	49	associations	association	NNS
10_1101-2021_02_08_430275	36	50	,	,	,
10_1101-2021_02_08_430275	36	51	and	and	CC
10_1101-2021_02_08_430275	36	52	our	-PRON-	PRP$
10_1101-2021_02_08_430275	36	53	modified	modified	JJ
10_1101-2021_02_08_430275	36	54	significant	significant	JJ
10_1101-2021_02_08_430275	36	55	structural	structural	JJ
10_1101-2021_02_08_430275	36	56	variant	variant	JJ
10_1101-2021_02_08_430275	36	57	method	method	NN
10_1101-2021_02_08_430275	36	58	allows	allow	VBZ
10_1101-2021_02_08_430275	36	59	the	the	DT
10_1101-2021_02_08_430275	36	60	detection	detection	NN
10_1101-2021_02_08_430275	36	61	of	of	IN
10_1101-2021_02_08_430275	36	62	such	such	JJ
10_1101-2021_02_08_430275	36	63	associations	association	NNS
10_1101-2021_02_08_430275	36	64	without	without	IN
10_1101-2021_02_08_430275	36	65	se-	se-	NN
10_1101-2021_02_08_430275	36	66	quencing	quence	VBG
10_1101-2021_02_08_430275	36	67	the	the	DT
10_1101-2021_02_08_430275	36	68	parental	parental	JJ
10_1101-2021_02_08_430275	36	69	genomes	genome	NNS
10_1101-2021_02_08_430275	36	70	,	,	,
10_1101-2021_02_08_430275	36	71	leading	lead	VBG
10_1101-2021_02_08_430275	36	72	to	to	IN
10_1101-2021_02_08_430275	36	73	further	further	RB
10_1101-2021_02_08_430275	36	74	lower	lower	VB
10_1101-2021_02_08_430275	36	75	the	the	DT
10_1101-2021_02_08_430275	36	76	sequencing	sequencing	NN
10_1101-2021_02_08_430275	36	77	cost	cost	NN
10_1101-2021_02_08_430275	36	78	and	and	CC
10_1101-2021_02_08_430275	36	79	making	make	VBG
10_1101-2021_02_08_430275	36	80	BSA	BSA	NNP
10_1101-2021_02_08_430275	36	81	-	-	HYPH
10_1101-2021_02_08_430275	36	82	Seq	seq	NN
10_1101-2021_02_08_430275	36	83	more	more	RBR
10_1101-2021_02_08_430275	36	84	accessible	accessible	JJ
10_1101-2021_02_08_430275	36	85	to	to	IN
10_1101-2021_02_08_430275	36	86	the	the	DT
10_1101-2021_02_08_430275	36	87	research	research	NN
10_1101-2021_02_08_430275	36	88	community	community	NN
10_1101-2021_02_08_430275	36	89	and	and	CC
10_1101-2021_02_08_430275	36	90	more	more	RBR
10_1101-2021_02_08_430275	36	91	applicable	applicable	JJ
10_1101-2021_02_08_430275	36	92	to	to	IN
10_1101-2021_02_08_430275	36	93	the	the	DT
10_1101-2021_02_08_430275	36	94	species	specie	NNS
10_1101-2021_02_08_430275	36	95	with	with	IN
10_1101-2021_02_08_430275	36	96	a	a	DT
10_1101-2021_02_08_430275	36	97	large	large	JJ
10_1101-2021_02_08_430275	36	98	genome	genome	NN
10_1101-2021_02_08_430275	36	99	.	.	.
10_1101-2021_02_08_430275	37	1	Author	author	NN
10_1101-2021_02_08_430275	37	2	contributions	contribution	NNS
10_1101-2021_02_08_430275	37	3	:	:	:
10_1101-2021_02_08_430275	37	4	JZ	JZ	NNP
10_1101-2021_02_08_430275	37	5	and	and	CC
10_1101-2021_02_08_430275	37	6	DRP	DRP	NNP
10_1101-2021_02_08_430275	37	7	conceived	conceive	VBD
10_1101-2021_02_08_430275	37	8	the	the	DT
10_1101-2021_02_08_430275	37	9	study	study	NN
10_1101-2021_02_08_430275	37	10	.	.	.
10_1101-2021_02_08_430275	38	1	JZ	JZ	NNP
10_1101-2021_02_08_430275	38	2	developed	develop	VBD
10_1101-2021_02_08_430275	38	3	the	the	DT
10_1101-2021_02_08_430275	38	4	algorithm	algorithm	NNP
10_1101-2021_02_08_430275	38	5	,	,	,
10_1101-2021_02_08_430275	38	6	wrote	write	VBD
10_1101-2021_02_08_430275	38	7	the	the	DT
10_1101-2021_02_08_430275	38	8	Python	Python	NNP
10_1101-2021_02_08_430275	38	9	code	code	NN
10_1101-2021_02_08_430275	38	10	,	,	,
10_1101-2021_02_08_430275	38	11	analyzed	analyze	VBD
10_1101-2021_02_08_430275	38	12	the	the	DT
10_1101-2021_02_08_430275	38	13	data	datum	NNS
10_1101-2021_02_08_430275	38	14	,	,	,
10_1101-2021_02_08_430275	38	15	and	and	CC
10_1101-2021_02_08_430275	38	16	wrote	write	VBD
10_1101-2021_02_08_430275	38	17	and	and	CC
10_1101-2021_02_08_430275	38	18	edited	edit	VBD
10_1101-2021_02_08_430275	38	19	the	the	DT
10_1101-2021_02_08_430275	38	20	manuscript	manuscript	NN
10_1101-2021_02_08_430275	38	21	.	.	.
10_1101-2021_02_08_430275	39	1	DRP	DRP	NNP
10_1101-2021_02_08_430275	39	2	edited	edit	VBD
10_1101-2021_02_08_430275	39	3	the	the	DT
10_1101-2021_02_08_430275	39	4	manuscript	manuscript	NN
10_1101-2021_02_08_430275	39	5	and	and	CC
10_1101-2021_02_08_430275	39	6	supervised	supervise	VBD
10_1101-2021_02_08_430275	39	7	the	the	DT
10_1101-2021_02_08_430275	39	8	project	project	NN
10_1101-2021_02_08_430275	39	9	.	.	.
10_1101-2021_02_08_430275	40	1	The	the	DT
10_1101-2021_02_08_430275	40	2	authors	author	NNS
10_1101-2021_02_08_430275	40	3	declare	declare	VBP
10_1101-2021_02_08_430275	40	4	no	no	DT
10_1101-2021_02_08_430275	40	5	conflict	conflict	NN
10_1101-2021_02_08_430275	40	6	of	of	IN
10_1101-2021_02_08_430275	40	7	interest	interest	NN
10_1101-2021_02_08_430275	40	8	.	.	.
10_1101-2021_02_08_430275	41	1	�	�	,
10_1101-2021_02_08_430275	41	2	To	to	IN
10_1101-2021_02_08_430275	41	3	whom	whom	WP
10_1101-2021_02_08_430275	41	4	correspondence	correspondence	NN
10_1101-2021_02_08_430275	41	5	should	should	MD
10_1101-2021_02_08_430275	41	6	be	be	VB
10_1101-2021_02_08_430275	41	7	addressed	address	VBN
10_1101-2021_02_08_430275	41	8	.	.	.
10_1101-2021_02_08_430275	42	1	E	e	NN
10_1101-2021_02_08_430275	42	2	-	-	NN
10_1101-2021_02_08_430275	42	3	mail	mail	NN
10_1101-2021_02_08_430275	42	4	:	:	:
10_1101-2021_02_08_430275	42	5	dilip_panthee@ncsu.edu	dilip_panthee@ncsu.edu	NNS
10_1101-2021_02_08_430275	42	6	or	or	CC
10_1101-2021_02_08_430275	42	7	zhang.jianbo@gmail.com	zhang.jianbo@gmail.com	ADD
10_1101-2021_02_08_430275	42	8	https://doi.org/10.1101/654137	https://doi.org/10.1101/654137	NNP
10_1101-2021_02_08_430275	42	9	bioRχiv	bioRχiv	NNP
10_1101-2021_02_08_430275	42	10	|	|	NNP
10_1101-2021_02_08_430275	42	11	November	November	NNP
10_1101-2021_02_08_430275	42	12	24	24	CD
10_1101-2021_02_08_430275	42	13	,	,	,
10_1101-2021_02_08_430275	42	14	2020	2020	CD
10_1101-2021_02_08_430275	42	15	|	|	SYM
10_1101-2021_02_08_430275	42	16	1	1	CD
10_1101-2021_02_08_430275	42	17	.CC	.CC	:
10_1101-2021_02_08_430275	42	18	-	-	HYPH
10_1101-2021_02_08_430275	42	19	BY	by	IN
10_1101-2021_02_08_430275	42	20	-	-	HYPH
10_1101-2021_02_08_430275	42	21	NC	NC	NNP
10_1101-2021_02_08_430275	42	22	-	-	HYPH
10_1101-2021_02_08_430275	42	23	ND	ND	NNP
10_1101-2021_02_08_430275	42	24	4.0	4.0	CD
10_1101-2021_02_08_430275	42	25	International	International	NNP
10_1101-2021_02_08_430275	42	26	licenseavailable	licenseavailable	NN
10_1101-2021_02_08_430275	42	27	under	under	IN
10_1101-2021_02_08_430275	42	28	a	a	DT
10_1101-2021_02_08_430275	42	29	(	(	-LRB-
10_1101-2021_02_08_430275	42	30	which	which	WDT
10_1101-2021_02_08_430275	42	31	was	be	VBD
10_1101-2021_02_08_430275	42	32	not	not	RB
10_1101-2021_02_08_430275	42	33	certified	certify	VBN
10_1101-2021_02_08_430275	42	34	by	by	IN
10_1101-2021_02_08_430275	42	35	peer	peer	NN
10_1101-2021_02_08_430275	42	36	review	review	NN
10_1101-2021_02_08_430275	42	37	)	)	-RRB-
10_1101-2021_02_08_430275	42	38	is	be	VBZ
10_1101-2021_02_08_430275	42	39	the	the	DT
10_1101-2021_02_08_430275	42	40	author	author	NN
10_1101-2021_02_08_430275	42	41	/	/	SYM
10_1101-2021_02_08_430275	42	42	funder	funder	NN
10_1101-2021_02_08_430275	42	43	,	,	,
10_1101-2021_02_08_430275	42	44	who	who	WP
10_1101-2021_02_08_430275	42	45	has	have	VBZ
10_1101-2021_02_08_430275	42	46	granted	grant	VBN
10_1101-2021_02_08_430275	42	47	bioRxiv	biorxiv	IN
10_1101-2021_02_08_430275	42	48	a	a	DT
10_1101-2021_02_08_430275	42	49	license	license	NN
10_1101-2021_02_08_430275	42	50	to	to	TO
10_1101-2021_02_08_430275	42	51	display	display	VB
10_1101-2021_02_08_430275	42	52	the	the	DT
10_1101-2021_02_08_430275	42	53	preprint	preprint	NN
10_1101-2021_02_08_430275	42	54	in	in	IN
10_1101-2021_02_08_430275	42	55	perpetuity	perpetuity	NN
10_1101-2021_02_08_430275	42	56	.	.	.
10_1101-2021_02_08_430275	43	1	It	-PRON-	PRP
10_1101-2021_02_08_430275	43	2	is	be	VBZ
10_1101-2021_02_08_430275	43	3	made	make	VBN
10_1101-2021_02_08_430275	43	4	The	the	DT
10_1101-2021_02_08_430275	43	5	copyright	copyright	NN
10_1101-2021_02_08_430275	43	6	holder	holder	NN
10_1101-2021_02_08_430275	43	7	for	for	IN
10_1101-2021_02_08_430275	43	8	this	this	DT
10_1101-2021_02_08_430275	43	9	preprintthis	preprintthis	NN
10_1101-2021_02_08_430275	43	10	version	version	NN
10_1101-2021_02_08_430275	43	11	posted	post	VBD
10_1101-2021_02_08_430275	43	12	February	February	NNP
10_1101-2021_02_08_430275	43	13	10	10	CD
10_1101-2021_02_08_430275	43	14	,	,	,
10_1101-2021_02_08_430275	43	15	2021	2021	CD
10_1101-2021_02_08_430275	43	16	.	.	.
10_1101-2021_02_08_430275	43	17	;	;	:
10_1101-2021_02_08_430275	43	18	https://doi.org/10.1101/2021.02.08.430275doi	https://doi.org/10.1101/2021.02.08.430275doi	ADD
10_1101-2021_02_08_430275	43	19	:	:	:
10_1101-2021_02_08_430275	43	20	bioRxiv	biorxiv	IN
10_1101-2021_02_08_430275	43	21	preprint	preprint	NN
10_1101-2021_02_08_430275	43	22	https://doi.org/10.1101/654137	https://doi.org/10.1101/654137	VBZ
10_1101-2021_02_08_430275	43	23	https://doi.org/10.1101/2021.02.08.430275	https://doi.org/10.1101/2021.02.08.430275	NNP
10_1101-2021_02_08_430275	43	24	http://creativecommons.org/licenses/by-nc-nd/4.0/	http://creativecommons.org/licenses/by-nc-nd/4.0/	NNP
10_1101-2021_02_08_430275	43	25	DR	DR	NNP
10_1101-2021_02_08_430275	43	26	AF	AF	NNP
10_1101-2021_02_08_430275	43	27	T	T	NNP
10_1101-2021_02_08_430275	43	28	of	of	IN
10_1101-2021_02_08_430275	43	29	the	the	DT
10_1101-2021_02_08_430275	43	30	parental	parental	JJ
10_1101-2021_02_08_430275	43	31	origin	origin	NN
10_1101-2021_02_08_430275	43	32	of	of	IN
10_1101-2021_02_08_430275	43	33	SNP	SNP	NNP
10_1101-2021_02_08_430275	43	34	alleles	allele	NNS
10_1101-2021_02_08_430275	43	35	and	and	CC
10_1101-2021_02_08_430275	43	36	the	the	DT
10_1101-2021_02_08_430275	43	37	identification68	identification68	NNS
10_1101-2021_02_08_430275	43	38	of	of	IN
10_1101-2021_02_08_430275	43	39	parental	parental	JJ
10_1101-2021_02_08_430275	43	40	heterozygous	heterozygous	JJ
10_1101-2021_02_08_430275	43	41	SNPs	snp	NNS
10_1101-2021_02_08_430275	43	42	.	.	.
10_1101-2021_02_08_430275	44	1	Modification	modification	NN
10_1101-2021_02_08_430275	44	2	of	of	IN
10_1101-2021_02_08_430275	44	3	our	-PRON-	PRP$
10_1101-2021_02_08_430275	44	4	original69	original69	NN
10_1101-2021_02_08_430275	44	5	method	method	NN
10_1101-2021_02_08_430275	44	6	to	to	TO
10_1101-2021_02_08_430275	44	7	allow	allow	VB
10_1101-2021_02_08_430275	44	8	the	the	DT
10_1101-2021_02_08_430275	44	9	analysis	analysis	NN
10_1101-2021_02_08_430275	44	10	of	of	IN
10_1101-2021_02_08_430275	44	11	BSA	BSA	NNP
10_1101-2021_02_08_430275	44	12	-	-	HYPH
10_1101-2021_02_08_430275	44	13	Seq	Seq	NNP
10_1101-2021_02_08_430275	44	14	data	datum	NNS
10_1101-2021_02_08_430275	44	15	in	in	IN
10_1101-2021_02_08_430275	44	16	the	the	DT
10_1101-2021_02_08_430275	44	17	absence	absence	NN
10_1101-2021_02_08_430275	44	18	of70	of70	NNS
10_1101-2021_02_08_430275	44	19	assembled	assemble	VBN
10_1101-2021_02_08_430275	44	20	or	or	CC
10_1101-2021_02_08_430275	44	21	NGS	NGS	NNP
10_1101-2021_02_08_430275	44	22	-	-	HYPH
10_1101-2021_02_08_430275	44	23	generated	generate	VBN
10_1101-2021_02_08_430275	44	24	parental	parental	JJ
10_1101-2021_02_08_430275	44	25	genome	genome	NN
10_1101-2021_02_08_430275	44	26	sequences	sequence	NNS
10_1101-2021_02_08_430275	44	27	would71	would71	JJS
10_1101-2021_02_08_430275	44	28	provide	provide	VBP
10_1101-2021_02_08_430275	44	29	greater	great	JJR
10_1101-2021_02_08_430275	44	30	flexibility	flexibility	NN
10_1101-2021_02_08_430275	44	31	and	and	CC
10_1101-2021_02_08_430275	44	32	significantly	significantly	RB
10_1101-2021_02_08_430275	44	33	reduce	reduce	VB
10_1101-2021_02_08_430275	44	34	sequencing72	sequencing72	NNP
10_1101-2021_02_08_430275	44	35	costs	cost	NNS
10_1101-2021_02_08_430275	44	36	.	.	.
10_1101-2021_02_08_430275	45	1	Hence	hence	RB
10_1101-2021_02_08_430275	45	2	,	,	,
10_1101-2021_02_08_430275	45	3	we	-PRON-	PRP
10_1101-2021_02_08_430275	45	4	modified	modify	VBD
10_1101-2021_02_08_430275	45	5	our	-PRON-	PRP$
10_1101-2021_02_08_430275	45	6	original	original	JJ
10_1101-2021_02_08_430275	45	7	script	script	NN
10_1101-2021_02_08_430275	45	8	to	to	TO
10_1101-2021_02_08_430275	45	9	allow	allow	VB
10_1101-2021_02_08_430275	45	10	for73	for73	JJR
10_1101-2021_02_08_430275	45	11	the	the	DT
10_1101-2021_02_08_430275	45	12	identification	identification	NN
10_1101-2021_02_08_430275	45	13	of	of	IN
10_1101-2021_02_08_430275	45	14	the	the	DT
10_1101-2021_02_08_430275	45	15	false	false	JJ
10_1101-2021_02_08_430275	45	16	-	-	HYPH
10_1101-2021_02_08_430275	45	17	positive	positive	JJ
10_1101-2021_02_08_430275	45	18	SNPs	snp	NNS
10_1101-2021_02_08_430275	45	19	/	/	SYM
10_1101-2021_02_08_430275	45	20	InDels	indel	NNS
10_1101-2021_02_08_430275	45	21	and	and	CC
10_1101-2021_02_08_430275	45	22	part74	part74	NNP
10_1101-2021_02_08_430275	45	23	of	of	IN
10_1101-2021_02_08_430275	45	24	the	the	DT
10_1101-2021_02_08_430275	45	25	heterozygous	heterozygous	JJ
10_1101-2021_02_08_430275	45	26	loci	loci	NN
10_1101-2021_02_08_430275	45	27	in	in	IN
10_1101-2021_02_08_430275	45	28	the	the	DT
10_1101-2021_02_08_430275	45	29	parents	parent	NNS
10_1101-2021_02_08_430275	45	30	without	without	IN
10_1101-2021_02_08_430275	45	31	the	the	DT
10_1101-2021_02_08_430275	45	32	aid	aid	NN
10_1101-2021_02_08_430275	45	33	of75	of75	NNP
10_1101-2021_02_08_430275	45	34	the	the	DT
10_1101-2021_02_08_430275	45	35	parental	parental	JJ
10_1101-2021_02_08_430275	45	36	genome	genome	JJ
10_1101-2021_02_08_430275	45	37	sequences	sequence	NNS
10_1101-2021_02_08_430275	45	38	.	.	.
10_1101-2021_02_08_430275	46	1	Using	use	VBG
10_1101-2021_02_08_430275	46	2	the	the	DT
10_1101-2021_02_08_430275	46	3	modified	modify	VBN
10_1101-2021_02_08_430275	46	4	script,76	script,76	NN
10_1101-2021_02_08_430275	46	5	along	along	IN
10_1101-2021_02_08_430275	46	6	with	with	IN
10_1101-2021_02_08_430275	46	7	the	the	DT
10_1101-2021_02_08_430275	46	8	scripts	script	NNS
10_1101-2021_02_08_430275	46	9	for	for	IN
10_1101-2021_02_08_430275	46	10	the	the	DT
10_1101-2021_02_08_430275	46	11	standard	standard	JJ
10_1101-2021_02_08_430275	46	12	G	g	NN
10_1101-2021_02_08_430275	46	13	-	-	HYPH
10_1101-2021_02_08_430275	46	14	statistic	statistic	NNP
10_1101-2021_02_08_430275	46	15	and	and	CC
10_1101-2021_02_08_430275	46	16	allele77	allele77	NNP
10_1101-2021_02_08_430275	46	17	frequency	frequency	NN
10_1101-2021_02_08_430275	46	18	methods	method	NNS
10_1101-2021_02_08_430275	46	19	(	(	-LRB-
10_1101-2021_02_08_430275	46	20	10	10	CD
10_1101-2021_02_08_430275	46	21	,	,	,
10_1101-2021_02_08_430275	46	22	11	11	CD
10_1101-2021_02_08_430275	46	23	)	)	-RRB-
10_1101-2021_02_08_430275	46	24	,	,	,
10_1101-2021_02_08_430275	46	25	we	-PRON-	PRP
10_1101-2021_02_08_430275	46	26	analyzed	analyze	VBD
10_1101-2021_02_08_430275	46	27	a	a	DT
10_1101-2021_02_08_430275	46	28	public	public	JJ
10_1101-2021_02_08_430275	46	29	BSA	BSA	NNP
10_1101-2021_02_08_430275	46	30	-	-	HYPH
10_1101-2021_02_08_430275	46	31	Seq78	Seq78	NNP
10_1101-2021_02_08_430275	46	32	dataset	dataset	NN
10_1101-2021_02_08_430275	46	33	using	use	VBG
10_1101-2021_02_08_430275	46	34	either	either	CC
10_1101-2021_02_08_430275	46	35	the	the	DT
10_1101-2021_02_08_430275	46	36	genome	genome	JJ
10_1101-2021_02_08_430275	46	37	sequences	sequence	NNS
10_1101-2021_02_08_430275	46	38	of	of	IN
10_1101-2021_02_08_430275	46	39	both	both	CC
10_1101-2021_02_08_430275	46	40	the	the	DT
10_1101-2021_02_08_430275	46	41	parents79	parents79	NNPS
10_1101-2021_02_08_430275	46	42	and	and	CC
10_1101-2021_02_08_430275	46	43	the	the	DT
10_1101-2021_02_08_430275	46	44	bulks	bulk	NNS
10_1101-2021_02_08_430275	46	45	,	,	,
10_1101-2021_02_08_430275	46	46	or	or	CC
10_1101-2021_02_08_430275	46	47	the	the	DT
10_1101-2021_02_08_430275	46	48	bulk	bulk	JJ
10_1101-2021_02_08_430275	46	49	genome	genome	JJ
10_1101-2021_02_08_430275	46	50	sequences	sequence	NNS
10_1101-2021_02_08_430275	46	51	alone	alone	RB
10_1101-2021_02_08_430275	46	52	.	.	.
10_1101-2021_02_08_430275	47	1	The80	the80	NN
10_1101-2021_02_08_430275	47	2	results	result	NNS
10_1101-2021_02_08_430275	47	3	revealed	reveal	VBD
10_1101-2021_02_08_430275	47	4	that	that	IN
10_1101-2021_02_08_430275	47	5	reliable	reliable	JJ
10_1101-2021_02_08_430275	47	6	detection	detection	NN
10_1101-2021_02_08_430275	47	7	of	of	IN
10_1101-2021_02_08_430275	47	8	genomic	genomic	JJ
10_1101-2021_02_08_430275	47	9	region	region	NN
10_1101-2021_02_08_430275	47	10	-	-	HYPH
10_1101-2021_02_08_430275	47	11	trait81	trait81	NN
10_1101-2021_02_08_430275	47	12	associations	association	NNS
10_1101-2021_02_08_430275	47	13	can	can	MD
10_1101-2021_02_08_430275	47	14	be	be	VB
10_1101-2021_02_08_430275	47	15	achieved	achieve	VBN
10_1101-2021_02_08_430275	47	16	only	only	RB
10_1101-2021_02_08_430275	47	17	via	via	IN
10_1101-2021_02_08_430275	47	18	our	-PRON-	PRP$
10_1101-2021_02_08_430275	47	19	modified	modify	VBN
10_1101-2021_02_08_430275	47	20	script	script	NN
10_1101-2021_02_08_430275	47	21	when82	when82	NNPS
10_1101-2021_02_08_430275	47	22	using	use	VBG
10_1101-2021_02_08_430275	47	23	only	only	RB
10_1101-2021_02_08_430275	47	24	the	the	DT
10_1101-2021_02_08_430275	47	25	bulk	bulk	NN
10_1101-2021_02_08_430275	47	26	genome	genome	JJ
10_1101-2021_02_08_430275	47	27	sequences.83	sequences.83	NNP
10_1101-2021_02_08_430275	47	28	Materials	Materials	NNP
10_1101-2021_02_08_430275	47	29	and	and	CC
10_1101-2021_02_08_430275	47	30	Methods84	Methods84	NNP
10_1101-2021_02_08_430275	47	31	The	the	DT
10_1101-2021_02_08_430275	47	32	sequencing	sequence	VBG
10_1101-2021_02_08_430275	47	33	data	datum	NNS
10_1101-2021_02_08_430275	47	34	used	use	VBN
10_1101-2021_02_08_430275	47	35	in	in	IN
10_1101-2021_02_08_430275	47	36	this	this	DT
10_1101-2021_02_08_430275	47	37	study	study	NN
10_1101-2021_02_08_430275	47	38	were	be	VBD
10_1101-2021_02_08_430275	47	39	generated	generate	VBN
10_1101-2021_02_08_430275	47	40	by	by	IN
10_1101-2021_02_08_430275	47	41	Lahari	Lahari	NNP
10_1101-2021_02_08_430275	47	42	et85	et85	NNP
10_1101-2021_02_08_430275	47	43	al	al	NNP
10_1101-2021_02_08_430275	47	44	.	.	.
10_1101-2021_02_08_430275	48	1	(	(	-LRB-
10_1101-2021_02_08_430275	48	2	12	12	CD
10_1101-2021_02_08_430275	48	3	)	)	-RRB-
10_1101-2021_02_08_430275	48	4	.	.	.
10_1101-2021_02_08_430275	49	1	Using	use	VBG
10_1101-2021_02_08_430275	49	2	the	the	DT
10_1101-2021_02_08_430275	49	3	allele	allele	NNP
10_1101-2021_02_08_430275	49	4	frequency	frequency	NN
10_1101-2021_02_08_430275	49	5	method	method	NN
10_1101-2021_02_08_430275	49	6	,	,	,
10_1101-2021_02_08_430275	49	7	the	the	DT
10_1101-2021_02_08_430275	49	8	authors	author	NNS
10_1101-2021_02_08_430275	49	9	identified86	identified86	VBZ
10_1101-2021_02_08_430275	49	10	a	a	DT
10_1101-2021_02_08_430275	49	11	single	single	JJ
10_1101-2021_02_08_430275	49	12	locus	locus	NN
10_1101-2021_02_08_430275	49	13	for	for	IN
10_1101-2021_02_08_430275	49	14	root	root	NN
10_1101-2021_02_08_430275	49	15	-	-	HYPH
10_1101-2021_02_08_430275	49	16	knot	knot	NN
10_1101-2021_02_08_430275	49	17	nematode	nematode	NNP
10_1101-2021_02_08_430275	49	18	resistance	resistance	NNP
10_1101-2021_02_08_430275	49	19	in	in	IN
10_1101-2021_02_08_430275	49	20	rice	rice	NN
10_1101-2021_02_08_430275	49	21	.	.	.
10_1101-2021_02_08_430275	50	1	In	in	IN
10_1101-2021_02_08_430275	50	2	that87	that87	NNP
10_1101-2021_02_08_430275	50	3	study	study	NN
10_1101-2021_02_08_430275	50	4	,	,	,
10_1101-2021_02_08_430275	50	5	the	the	DT
10_1101-2021_02_08_430275	50	6	parents	parent	NNS
10_1101-2021_02_08_430275	50	7	of	of	IN
10_1101-2021_02_08_430275	50	8	the	the	DT
10_1101-2021_02_08_430275	50	9	F2	f2	NN
10_1101-2021_02_08_430275	50	10	population	population	NN
10_1101-2021_02_08_430275	50	11	were	be	VBD
10_1101-2021_02_08_430275	50	12	LD24	LD24	NNP
10_1101-2021_02_08_430275	50	13	and	and	CC
10_1101-2021_02_08_430275	50	14	VialoneNano,88	VialoneNano,88	NNP
10_1101-2021_02_08_430275	50	15	yielding	yield	VBG
10_1101-2021_02_08_430275	50	16	an	an	DT
10_1101-2021_02_08_430275	50	17	F2	f2	NN
10_1101-2021_02_08_430275	50	18	population	population	NN
10_1101-2021_02_08_430275	50	19	size	size	NN
10_1101-2021_02_08_430275	50	20	of	of	IN
10_1101-2021_02_08_430275	50	21	178	178	CD
10_1101-2021_02_08_430275	50	22	(	(	-LRB-
10_1101-2021_02_08_430275	50	23	plants	plant	NNS
10_1101-2021_02_08_430275	50	24	)	)	-RRB-
10_1101-2021_02_08_430275	50	25	,	,	,
10_1101-2021_02_08_430275	50	26	and	and	CC
10_1101-2021_02_08_430275	50	27	both	both	CC
10_1101-2021_02_08_430275	50	28	the	the	DT
10_1101-2021_02_08_430275	50	29	resistant89	resistant89	NNP
10_1101-2021_02_08_430275	50	30	bulk	bulk	NN
10_1101-2021_02_08_430275	50	31	and	and	CC
10_1101-2021_02_08_430275	50	32	the	the	DT
10_1101-2021_02_08_430275	50	33	susceptible	susceptible	JJ
10_1101-2021_02_08_430275	50	34	bulk	bulk	NN
10_1101-2021_02_08_430275	50	35	contained	contain	VBD
10_1101-2021_02_08_430275	50	36	23	23	CD
10_1101-2021_02_08_430275	50	37	plants	plant	NNS
10_1101-2021_02_08_430275	50	38	each	each	DT
10_1101-2021_02_08_430275	50	39	.	.	.
10_1101-2021_02_08_430275	51	1	The	the	DT
10_1101-2021_02_08_430275	51	2	DNA90	dna90	JJ
10_1101-2021_02_08_430275	51	3	samples	sample	NNS
10_1101-2021_02_08_430275	51	4	of	of	IN
10_1101-2021_02_08_430275	51	5	both	both	PDT
10_1101-2021_02_08_430275	51	6	the	the	DT
10_1101-2021_02_08_430275	51	7	parents	parent	NNS
10_1101-2021_02_08_430275	51	8	and	and	CC
10_1101-2021_02_08_430275	51	9	the	the	DT
10_1101-2021_02_08_430275	51	10	bulks	bulk	NNS
10_1101-2021_02_08_430275	51	11	were	be	VBD
10_1101-2021_02_08_430275	51	12	sequenced	sequence	VBN
10_1101-2021_02_08_430275	51	13	using91	using91	NNP
10_1101-2021_02_08_430275	51	14	Illumina	Illumina	NNP
10_1101-2021_02_08_430275	51	15	MiSeq	MiSeq	NNP
10_1101-2021_02_08_430275	51	16	Sequencing	Sequencing	NNP
10_1101-2021_02_08_430275	51	17	System	System	NNP
10_1101-2021_02_08_430275	51	18	and	and	CC
10_1101-2021_02_08_430275	51	19	MiSeq	MiSeq	NNP
10_1101-2021_02_08_430275	51	20	v3	v3	NN
10_1101-2021_02_08_430275	51	21	chemistry.92	chemistry.92	NNP
10_1101-2021_02_08_430275	51	22	The	the	DT
10_1101-2021_02_08_430275	51	23	BSA	BSA	NNP
10_1101-2021_02_08_430275	51	24	-	-	HYPH
10_1101-2021_02_08_430275	51	25	Seq	Seq	NNP
10_1101-2021_02_08_430275	51	26	sequencing	sequencing	NN
10_1101-2021_02_08_430275	51	27	data	datum	NNS
10_1101-2021_02_08_430275	51	28	(	(	-LRB-
10_1101-2021_02_08_430275	51	29	ERR2696318	ERR2696318	NNP
10_1101-2021_02_08_430275	51	30	:	:	:
10_1101-2021_02_08_430275	51	31	parent	parent	NN
10_1101-2021_02_08_430275	51	32	LD24;93	ld24;93	CD
10_1101-2021_02_08_430275	51	33	ERR2696319	err2696319	NN
10_1101-2021_02_08_430275	51	34	:	:	:
10_1101-2021_02_08_430275	51	35	parent	parent	NN
10_1101-2021_02_08_430275	51	36	VialoneNano	VialoneNano	NNP
10_1101-2021_02_08_430275	51	37	;	;	:
10_1101-2021_02_08_430275	51	38	ERR2696321	ERR2696321	NNP
10_1101-2021_02_08_430275	51	39	:	:	:
10_1101-2021_02_08_430275	51	40	the	the	DT
10_1101-2021_02_08_430275	51	41	resistant	resistant	JJ
10_1101-2021_02_08_430275	51	42	bulk94	bulk94	NN
10_1101-2021_02_08_430275	51	43	from	from	IN
10_1101-2021_02_08_430275	51	44	the	the	DT
10_1101-2021_02_08_430275	51	45	F2	F2	NNP
10_1101-2021_02_08_430275	51	46	population	population	NN
10_1101-2021_02_08_430275	51	47	;	;	:
10_1101-2021_02_08_430275	51	48	ERR2696322	ERR2696322	NNP
10_1101-2021_02_08_430275	51	49	:	:	:
10_1101-2021_02_08_430275	51	50	the	the	DT
10_1101-2021_02_08_430275	51	51	susceptible	susceptible	JJ
10_1101-2021_02_08_430275	51	52	bulk	bulk	NN
10_1101-2021_02_08_430275	51	53	from95	from95	VBD
10_1101-2021_02_08_430275	51	54	the	the	DT
10_1101-2021_02_08_430275	51	55	F2	F2	NNP
10_1101-2021_02_08_430275	51	56	population	population	NN
10_1101-2021_02_08_430275	51	57	)	)	-RRB-
10_1101-2021_02_08_430275	51	58	were	be	VBD
10_1101-2021_02_08_430275	51	59	downloaded	download	VBN
10_1101-2021_02_08_430275	51	60	from	from	IN
10_1101-2021_02_08_430275	51	61	the	the	DT
10_1101-2021_02_08_430275	51	62	European	European	NNP
10_1101-2021_02_08_430275	51	63	Nucleotide96	Nucleotide96	NNP
10_1101-2021_02_08_430275	51	64	Archive	Archive	NNP
10_1101-2021_02_08_430275	51	65	(	(	-LRB-
10_1101-2021_02_08_430275	51	66	ENA	ENA	NNP
10_1101-2021_02_08_430275	51	67	)	)	-RRB-
10_1101-2021_02_08_430275	51	68	using	use	VBG
10_1101-2021_02_08_430275	51	69	the	the	DT
10_1101-2021_02_08_430275	51	70	Linux	Linux	NNP
10_1101-2021_02_08_430275	51	71	program	program	NN
10_1101-2021_02_08_430275	51	72	wget	wget	NN
10_1101-2021_02_08_430275	51	73	,	,	,
10_1101-2021_02_08_430275	51	74	and	and	CC
10_1101-2021_02_08_430275	51	75	the	the	DT
10_1101-2021_02_08_430275	51	76	rice	rice	NN
10_1101-2021_02_08_430275	51	77	reference97	reference97	NN
10_1101-2021_02_08_430275	51	78	sequence	sequence	NN
10_1101-2021_02_08_430275	51	79	(	(	-LRB-
10_1101-2021_02_08_430275	51	80	Release	Release	NNP
10_1101-2021_02_08_430275	51	81	47	47	CD
10_1101-2021_02_08_430275	51	82	)	)	-RRB-
10_1101-2021_02_08_430275	51	83	was	be	VBD
10_1101-2021_02_08_430275	51	84	downloaded	download	VBN
10_1101-2021_02_08_430275	51	85	from	from	IN
10_1101-2021_02_08_430275	51	86	https://plants.ensembl.98	https://plants.ensembl.98	CD
10_1101-2021_02_08_430275	51	87	org	org	NN
10_1101-2021_02_08_430275	51	88	/	/	SYM
10_1101-2021_02_08_430275	51	89	Oryza_sativa	Oryza_sativa	NNP
10_1101-2021_02_08_430275	51	90	/	/	SYM
10_1101-2021_02_08_430275	51	91	Info	Info	NNP
10_1101-2021_02_08_430275	51	92	/	/	SYM
10_1101-2021_02_08_430275	51	93	Index	Index	NNP
10_1101-2021_02_08_430275	51	94	.	.	.
10_1101-2021_02_08_430275	52	1	Sequencing	sequence	VBG
10_1101-2021_02_08_430275	52	2	data	datum	NNS
10_1101-2021_02_08_430275	52	3	preprocessing	preprocesse	VBG
10_1101-2021_02_08_430275	52	4	and	and	CC
10_1101-2021_02_08_430275	52	5	SNP99	snp99	JJ
10_1101-2021_02_08_430275	52	6	calling	calling	NN
10_1101-2021_02_08_430275	52	7	were	be	VBD
10_1101-2021_02_08_430275	52	8	performed	perform	VBN
10_1101-2021_02_08_430275	52	9	as	as	IN
10_1101-2021_02_08_430275	52	10	described	describe	VBN
10_1101-2021_02_08_430275	52	11	previously	previously	RB
10_1101-2021_02_08_430275	52	12	(	(	-LRB-
10_1101-2021_02_08_430275	52	13	8)	8)	CD
10_1101-2021_02_08_430275	52	14	.	.	.
10_1101-2021_02_08_430275	53	1	When	when	WRB
10_1101-2021_02_08_430275	53	2	analyzing100	analyzing100	NNP
10_1101-2021_02_08_430275	53	3	the	the	DT
10_1101-2021_02_08_430275	53	4	BSA	BSA	NNP
10_1101-2021_02_08_430275	53	5	-	-	HYPH
10_1101-2021_02_08_430275	53	6	Seq	seq	NN
10_1101-2021_02_08_430275	53	7	data	datum	NNS
10_1101-2021_02_08_430275	53	8	with	with	IN
10_1101-2021_02_08_430275	53	9	the	the	DT
10_1101-2021_02_08_430275	53	10	genome	genome	JJ
10_1101-2021_02_08_430275	53	11	sequences	sequence	NNS
10_1101-2021_02_08_430275	53	12	of	of	IN
10_1101-2021_02_08_430275	53	13	both	both	CC
10_1101-2021_02_08_430275	53	14	the	the	DT
10_1101-2021_02_08_430275	53	15	parents101	parents101	NNP
10_1101-2021_02_08_430275	53	16	and	and	CC
10_1101-2021_02_08_430275	53	17	the	the	DT
10_1101-2021_02_08_430275	53	18	bulks	bulk	NNS
10_1101-2021_02_08_430275	53	19	,	,	,
10_1101-2021_02_08_430275	53	20	bulk	bulk	NN
10_1101-2021_02_08_430275	53	21	/	/	SYM
10_1101-2021_02_08_430275	53	22	parent	parent	NN
10_1101-2021_02_08_430275	53	23	SNP	SNP	NNP
10_1101-2021_02_08_430275	53	24	calling	calling	NN
10_1101-2021_02_08_430275	53	25	was	be	VBD
10_1101-2021_02_08_430275	53	26	performed	perform	VBN
10_1101-2021_02_08_430275	53	27	separately.102	separately.102	NNP
10_1101-2021_02_08_430275	53	28	The	the	DT
10_1101-2021_02_08_430275	53	29	common	common	JJ
10_1101-2021_02_08_430275	53	30	SNPs	snp	NNS
10_1101-2021_02_08_430275	53	31	of	of	IN
10_1101-2021_02_08_430275	53	32	the	the	DT
10_1101-2021_02_08_430275	53	33	two	two	CD
10_1101-2021_02_08_430275	53	34	SNP	SNP	NNP
10_1101-2021_02_08_430275	53	35	datasets	dataset	NNS
10_1101-2021_02_08_430275	53	36	were	be	VBD
10_1101-2021_02_08_430275	53	37	used	use	VBN
10_1101-2021_02_08_430275	53	38	for	for	IN
10_1101-2021_02_08_430275	53	39	the103	the103	JJ
10_1101-2021_02_08_430275	53	40	downstream	downstream	JJ
10_1101-2021_02_08_430275	53	41	analysis.104	analysis.104	NNP
10_1101-2021_02_08_430275	53	42	The	the	DT
10_1101-2021_02_08_430275	53	43	SNP	SNP	NNP
10_1101-2021_02_08_430275	53	44	dataset	dataset	NN
10_1101-2021_02_08_430275	53	45	generated	generate	VBD
10_1101-2021_02_08_430275	53	46	via	via	IN
10_1101-2021_02_08_430275	53	47	SNP	SNP	NNP
10_1101-2021_02_08_430275	53	48	calling	call	VBG
10_1101-2021_02_08_430275	53	49	was	be	VBD
10_1101-2021_02_08_430275	53	50	processed	process	VBN
10_1101-2021_02_08_430275	53	51	with105	with105	NNP
10_1101-2021_02_08_430275	53	52	our	-PRON-	PRP$
10_1101-2021_02_08_430275	53	53	Python	Python	NNP
10_1101-2021_02_08_430275	53	54	script	script	NN
10_1101-2021_02_08_430275	53	55	to	to	TO
10_1101-2021_02_08_430275	53	56	identify	identify	VB
10_1101-2021_02_08_430275	53	57	significant	significant	JJ
10_1101-2021_02_08_430275	53	58	SNP	SNP	NNP
10_1101-2021_02_08_430275	53	59	-	-	HYPH
10_1101-2021_02_08_430275	53	60	trait	trait	NN
10_1101-2021_02_08_430275	53	61	associations.106	associations.106	NNP
10_1101-2021_02_08_430275	53	62	A	a	DT
10_1101-2021_02_08_430275	53	63	single	single	JJ
10_1101-2021_02_08_430275	53	64	script	script	NN
10_1101-2021_02_08_430275	53	65	containing	contain	VBG
10_1101-2021_02_08_430275	53	66	all	all	PDT
10_1101-2021_02_08_430275	53	67	the	the	DT
10_1101-2021_02_08_430275	53	68	three	three	CD
10_1101-2021_02_08_430275	53	69	methods	method	NNS
10_1101-2021_02_08_430275	53	70	is	be	VBZ
10_1101-2021_02_08_430275	53	71	available	available	JJ
10_1101-2021_02_08_430275	53	72	on107	on107	NN
10_1101-2021_02_08_430275	53	73	the	the	DT
10_1101-2021_02_08_430275	53	74	website	website	NN
10_1101-2021_02_08_430275	53	75	https://github.com/dblhlx/PyBSASeq	https://github.com/dblhlx/pybsaseq	NN
10_1101-2021_02_08_430275	53	76	.	.	.
10_1101-2021_02_08_430275	54	1	The	the	DT
10_1101-2021_02_08_430275	54	2	workflow	workflow	NN
10_1101-2021_02_08_430275	54	3	of	of	IN
10_1101-2021_02_08_430275	54	4	the108	the108	NNS
10_1101-2021_02_08_430275	54	5	scripts	script	NNS
10_1101-2021_02_08_430275	54	6	is	be	VBZ
10_1101-2021_02_08_430275	54	7	as	as	IN
10_1101-2021_02_08_430275	54	8	follows:109	follows:109	NNP
10_1101-2021_02_08_430275	54	9	1	1	CD
10_1101-2021_02_08_430275	54	10	.	.	.
10_1101-2021_02_08_430275	55	1	Read	read	VB
10_1101-2021_02_08_430275	55	2	the	the	DT
10_1101-2021_02_08_430275	55	3	.tsv	.tsv	CD
10_1101-2021_02_08_430275	55	4	input	input	NN
10_1101-2021_02_08_430275	55	5	file	file	NN
10_1101-2021_02_08_430275	55	6	generated	generate	VBN
10_1101-2021_02_08_430275	55	7	via	via	IN
10_1101-2021_02_08_430275	55	8	SNP	SNP	NNP
10_1101-2021_02_08_430275	55	9	calling	call	VBG
10_1101-2021_02_08_430275	55	10	into	into	IN
10_1101-2021_02_08_430275	55	11	a	a	DT
10_1101-2021_02_08_430275	55	12	Pandas110	Pandas110	NNP
10_1101-2021_02_08_430275	55	13	DataFrame.111	DataFrame.111	NNP
10_1101-2021_02_08_430275	55	14	2	2	CD
10_1101-2021_02_08_430275	55	15	.	.	.
10_1101-2021_02_08_430275	56	1	Perform	perform	VB
10_1101-2021_02_08_430275	56	2	SNP	SNP	NNP
10_1101-2021_02_08_430275	56	3	filtering	filter	VBG
10_1101-2021_02_08_430275	56	4	on	on	IN
10_1101-2021_02_08_430275	56	5	the	the	DT
10_1101-2021_02_08_430275	56	6	Pandas	Pandas	NNP
10_1101-2021_02_08_430275	56	7	DataFrame.112	DataFrame.112	NNP
10_1101-2021_02_08_430275	56	8	3	3	CD
10_1101-2021_02_08_430275	56	9	.	.	.
10_1101-2021_02_08_430275	57	1	Identify	identify	VB
10_1101-2021_02_08_430275	57	2	the	the	DT
10_1101-2021_02_08_430275	57	3	significant	significant	JJ
10_1101-2021_02_08_430275	57	4	SNPs	snp	NNS
10_1101-2021_02_08_430275	57	5	(	(	-LRB-
10_1101-2021_02_08_430275	57	6	sSNPs	ssnps	NN
10_1101-2021_02_08_430275	57	7	)	)	-RRB-
10_1101-2021_02_08_430275	57	8	via	via	IN
10_1101-2021_02_08_430275	57	9	Fisher	Fisher	NNP
10_1101-2021_02_08_430275	57	10	’s	’s	POS
10_1101-2021_02_08_430275	57	11	exact	exact	JJ
10_1101-2021_02_08_430275	57	12	test113	test113	FW
10_1101-2021_02_08_430275	57	13	(	(	-LRB-
10_1101-2021_02_08_430275	57	14	the	the	DT
10_1101-2021_02_08_430275	57	15	significant	significant	JJ
10_1101-2021_02_08_430275	57	16	structural	structural	JJ
10_1101-2021_02_08_430275	57	17	variant	variant	JJ
10_1101-2021_02_08_430275	57	18	method	method	NN
10_1101-2021_02_08_430275	57	19	)	)	-RRB-
10_1101-2021_02_08_430275	57	20	,	,	,
10_1101-2021_02_08_430275	57	21	calculate	calculate	VB
10_1101-2021_02_08_430275	57	22	the	the	DT
10_1101-2021_02_08_430275	57	23	ΔAF114	ΔAF114	NNP
10_1101-2021_02_08_430275	57	24	(	(	-LRB-
10_1101-2021_02_08_430275	57	25	allele	allele	NNP
10_1101-2021_02_08_430275	57	26	frequency	frequency	NN
10_1101-2021_02_08_430275	57	27	difference	difference	NN
10_1101-2021_02_08_430275	57	28	between	between	IN
10_1101-2021_02_08_430275	57	29	bulks	bulk	NNS
10_1101-2021_02_08_430275	57	30	)	)	-RRB-
10_1101-2021_02_08_430275	57	31	values	value	NNS
10_1101-2021_02_08_430275	57	32	(	(	-LRB-
10_1101-2021_02_08_430275	57	33	the	the	DT
10_1101-2021_02_08_430275	57	34	allele115	allele115	NNP
10_1101-2021_02_08_430275	57	35	frequency	frequency	NN
10_1101-2021_02_08_430275	57	36	method	method	NN
10_1101-2021_02_08_430275	57	37	)	)	-RRB-
10_1101-2021_02_08_430275	57	38	,	,	,
10_1101-2021_02_08_430275	57	39	or	or	CC
10_1101-2021_02_08_430275	57	40	calculate	calculate	VB
10_1101-2021_02_08_430275	57	41	the	the	DT
10_1101-2021_02_08_430275	57	42	G	g	NN
10_1101-2021_02_08_430275	57	43	-	-	HYPH
10_1101-2021_02_08_430275	57	44	statistic	statistic	NN
10_1101-2021_02_08_430275	57	45	values	value	NNS
10_1101-2021_02_08_430275	57	46	(	(	-LRB-
10_1101-2021_02_08_430275	57	47	the116	the116	NNP
10_1101-2021_02_08_430275	57	48	G	g	NN
10_1101-2021_02_08_430275	57	49	-	-	HYPH
10_1101-2021_02_08_430275	57	50	statistic	statistic	NN
10_1101-2021_02_08_430275	57	51	method	method	NN
10_1101-2021_02_08_430275	57	52	)	)	-RRB-
10_1101-2021_02_08_430275	57	53	using	use	VBG
10_1101-2021_02_08_430275	57	54	the	the	DT
10_1101-2021_02_08_430275	57	55	four	four	CD
10_1101-2021_02_08_430275	57	56	AD	ad	NN
10_1101-2021_02_08_430275	57	57	values	value	NNS
10_1101-2021_02_08_430275	57	58	(	(	-LRB-
10_1101-2021_02_08_430275	57	59	ADref1	ADref1	NNP
10_1101-2021_02_08_430275	57	60	and117	and117	NNP
10_1101-2021_02_08_430275	57	61	ADalt1	ADalt1	NNP
10_1101-2021_02_08_430275	57	62	of	of	IN
10_1101-2021_02_08_430275	57	63	bulk	bulk	NNP
10_1101-2021_02_08_430275	57	64	1	1	CD
10_1101-2021_02_08_430275	57	65	and	and	CC
10_1101-2021_02_08_430275	57	66	ADref2	ADref2	NNP
10_1101-2021_02_08_430275	57	67	and	and	CC
10_1101-2021_02_08_430275	57	68	ADalt2	ADalt2	NNP
10_1101-2021_02_08_430275	57	69	of	of	IN
10_1101-2021_02_08_430275	57	70	bulk	bulk	NNP
10_1101-2021_02_08_430275	57	71	2	2	CD
10_1101-2021_02_08_430275	57	72	)	)	-RRB-
10_1101-2021_02_08_430275	57	73	of	of	IN
10_1101-2021_02_08_430275	57	74	each118	each118	NNP
10_1101-2021_02_08_430275	57	75	SNP	SNP	NNP
10_1101-2021_02_08_430275	57	76	in	in	IN
10_1101-2021_02_08_430275	57	77	the	the	DT
10_1101-2021_02_08_430275	57	78	filtered	filter	VBN
10_1101-2021_02_08_430275	57	79	Pandas	Pandas	NNP
10_1101-2021_02_08_430275	57	80	DataFrame.119	DataFrame.119	NNP
10_1101-2021_02_08_430275	57	81	4	4	CD
10_1101-2021_02_08_430275	57	82	.	.	.
10_1101-2021_02_08_430275	58	1	Use	use	VB
10_1101-2021_02_08_430275	58	2	the	the	DT
10_1101-2021_02_08_430275	58	3	sliding	slide	VBG
10_1101-2021_02_08_430275	58	4	window	window	NN
10_1101-2021_02_08_430275	58	5	algorithm	algorithm	NN
10_1101-2021_02_08_430275	58	6	to	to	TO
10_1101-2021_02_08_430275	58	7	plot	plot	VB
10_1101-2021_02_08_430275	58	8	the	the	DT
10_1101-2021_02_08_430275	58	9	sSNP	ssnp	NN
10_1101-2021_02_08_430275	58	10	/	/	SYM
10_1101-2021_02_08_430275	58	11	totalSNP120	totalSNP120	NNP
10_1101-2021_02_08_430275	58	12	ratios	ratio	NNS
10_1101-2021_02_08_430275	58	13	,	,	,
10_1101-2021_02_08_430275	58	14	the	the	DT
10_1101-2021_02_08_430275	58	15	ΔAF	δaf	NN
10_1101-2021_02_08_430275	58	16	values	value	NNS
10_1101-2021_02_08_430275	58	17	,	,	,
10_1101-2021_02_08_430275	58	18	or	or	CC
10_1101-2021_02_08_430275	58	19	the	the	DT
10_1101-2021_02_08_430275	58	20	G	g	NN
10_1101-2021_02_08_430275	58	21	-	-	HYPH
10_1101-2021_02_08_430275	58	22	statistic	statistic	NN
10_1101-2021_02_08_430275	58	23	values	value	NNS
10_1101-2021_02_08_430275	58	24	against	against	IN
10_1101-2021_02_08_430275	58	25	their121	their121	NNP
10_1101-2021_02_08_430275	58	26	genomic	genomic	JJ
10_1101-2021_02_08_430275	58	27	positions.122	positions.122	NNP
10_1101-2021_02_08_430275	58	28	5	5	CD
10_1101-2021_02_08_430275	58	29	.	.	.
10_1101-2021_02_08_430275	59	1	Estimate	estimate	VB
10_1101-2021_02_08_430275	59	2	the	the	DT
10_1101-2021_02_08_430275	59	3	threshold	threshold	NN
10_1101-2021_02_08_430275	59	4	of	of	IN
10_1101-2021_02_08_430275	59	5	the	the	DT
10_1101-2021_02_08_430275	59	6	sSNP	ssnp	NN
10_1101-2021_02_08_430275	59	7	/	/	SYM
10_1101-2021_02_08_430275	59	8	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	59	9	ratio	ratio	NN
10_1101-2021_02_08_430275	59	10	,	,	,
10_1101-2021_02_08_430275	59	11	the	the	DT
10_1101-2021_02_08_430275	59	12	ΔAF,123	ΔAF,123	NNP
10_1101-2021_02_08_430275	59	13	or	or	CC
10_1101-2021_02_08_430275	59	14	the	the	DT
10_1101-2021_02_08_430275	59	15	G	g	NN
10_1101-2021_02_08_430275	59	16	-	-	HYPH
10_1101-2021_02_08_430275	59	17	statistic	statistic	NN
10_1101-2021_02_08_430275	59	18	via	via	IN
10_1101-2021_02_08_430275	59	19	simulation	simulation	NN
10_1101-2021_02_08_430275	59	20	.	.	.
10_1101-2021_02_08_430275	60	1	The	the	DT
10_1101-2021_02_08_430275	60	2	thresholds	threshold	NNS
10_1101-2021_02_08_430275	60	3	are	be	VBP
10_1101-2021_02_08_430275	60	4	used	use	VBN
10_1101-2021_02_08_430275	60	5	to124	to124	NN
10_1101-2021_02_08_430275	60	6	identify	identify	VB
10_1101-2021_02_08_430275	60	7	the	the	DT
10_1101-2021_02_08_430275	60	8	significant	significant	JJ
10_1101-2021_02_08_430275	60	9	peaks	peak	NNS
10_1101-2021_02_08_430275	60	10	/	/	SYM
10_1101-2021_02_08_430275	60	11	valleys	valley	NNS
10_1101-2021_02_08_430275	60	12	in	in	IN
10_1101-2021_02_08_430275	60	13	the	the	DT
10_1101-2021_02_08_430275	60	14	plots	plot	NNS
10_1101-2021_02_08_430275	60	15	generated	generate	VBD
10_1101-2021_02_08_430275	60	16	in125	in125	NNP
10_1101-2021_02_08_430275	60	17	step	step	NN
10_1101-2021_02_08_430275	60	18	4.126	4.126	CD
10_1101-2021_02_08_430275	60	19	Identification	Identification	NNP
10_1101-2021_02_08_430275	60	20	of	of	IN
10_1101-2021_02_08_430275	60	21	the	the	DT
10_1101-2021_02_08_430275	60	22	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	60	23	,	,	,
10_1101-2021_02_08_430275	60	24	calculation	calculation	NN
10_1101-2021_02_08_430275	60	25	of	of	IN
10_1101-2021_02_08_430275	60	26	the	the	DT
10_1101-2021_02_08_430275	60	27	sSNP	ssnp	NN
10_1101-2021_02_08_430275	60	28	/	/	SYM
10_1101-2021_02_08_430275	60	29	totalSNP127	totalSNP127	NNP
10_1101-2021_02_08_430275	60	30	ratios	ratio	NNS
10_1101-2021_02_08_430275	60	31	,	,	,
10_1101-2021_02_08_430275	60	32	the	the	DT
10_1101-2021_02_08_430275	60	33	G	g	NN
10_1101-2021_02_08_430275	60	34	-	-	HYPH
10_1101-2021_02_08_430275	60	35	statistic	statistic	NN
10_1101-2021_02_08_430275	60	36	values	value	NNS
10_1101-2021_02_08_430275	60	37	,	,	,
10_1101-2021_02_08_430275	60	38	or	or	CC
10_1101-2021_02_08_430275	60	39	the	the	DT
10_1101-2021_02_08_430275	60	40	ΔAF	δaf	NN
10_1101-2021_02_08_430275	60	41	values	value	NNS
10_1101-2021_02_08_430275	60	42	,	,	,
10_1101-2021_02_08_430275	60	43	and	and	CC
10_1101-2021_02_08_430275	60	44	estimation128	estimation128	NN
10_1101-2021_02_08_430275	60	45	of	of	IN
10_1101-2021_02_08_430275	60	46	their	-PRON-	PRP$
10_1101-2021_02_08_430275	60	47	thresholds	threshold	NNS
10_1101-2021_02_08_430275	60	48	were	be	VBD
10_1101-2021_02_08_430275	60	49	carried	carry	VBN
10_1101-2021_02_08_430275	60	50	out	out	RP
10_1101-2021_02_08_430275	60	51	as	as	IN
10_1101-2021_02_08_430275	60	52	described	describe	VBN
10_1101-2021_02_08_430275	60	53	previously	previously	RB
10_1101-2021_02_08_430275	60	54	(	(	-LRB-
10_1101-2021_02_08_430275	60	55	8).129	8).129	CD
10_1101-2021_02_08_430275	60	56	The	the	DT
10_1101-2021_02_08_430275	60	57	99.5th	99.5th	NNP
10_1101-2021_02_08_430275	60	58	percentile	percentile	NN
10_1101-2021_02_08_430275	60	59	of	of	IN
10_1101-2021_02_08_430275	60	60	10	10	CD
10_1101-2021_02_08_430275	60	61	000	000	CD
10_1101-2021_02_08_430275	60	62	simulated	simulate	VBN
10_1101-2021_02_08_430275	60	63	sSNP	ssnp	NN
10_1101-2021_02_08_430275	60	64	/	/	SYM
10_1101-2021_02_08_430275	60	65	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	60	66	ratios130	ratios130	IN
10_1101-2021_02_08_430275	60	67	or	or	CC
10_1101-2021_02_08_430275	60	68	G	g	NN
10_1101-2021_02_08_430275	60	69	-	-	HYPH
10_1101-2021_02_08_430275	60	70	statistic	statistic	NN
10_1101-2021_02_08_430275	60	71	values	value	NNS
10_1101-2021_02_08_430275	60	72	was	be	VBD
10_1101-2021_02_08_430275	60	73	used	use	VBN
10_1101-2021_02_08_430275	60	74	as	as	IN
10_1101-2021_02_08_430275	60	75	the	the	DT
10_1101-2021_02_08_430275	60	76	threshold	threshold	NN
10_1101-2021_02_08_430275	60	77	for	for	IN
10_1101-2021_02_08_430275	60	78	the	the	DT
10_1101-2021_02_08_430275	60	79	significant131	significant131	NNP
10_1101-2021_02_08_430275	60	80	structural	structural	JJ
10_1101-2021_02_08_430275	60	81	variant	variant	JJ
10_1101-2021_02_08_430275	60	82	method	method	NN
10_1101-2021_02_08_430275	60	83	or	or	CC
10_1101-2021_02_08_430275	60	84	the	the	DT
10_1101-2021_02_08_430275	60	85	G	g	NN
10_1101-2021_02_08_430275	60	86	-	-	HYPH
10_1101-2021_02_08_430275	60	87	statistic	statistic	NN
10_1101-2021_02_08_430275	60	88	method	method	NN
10_1101-2021_02_08_430275	60	89	,	,	,
10_1101-2021_02_08_430275	60	90	and	and	CC
10_1101-2021_02_08_430275	60	91	the	the	DT
10_1101-2021_02_08_430275	60	92	99%132	99%132	CD
10_1101-2021_02_08_430275	60	93	confidence	confidence	NN
10_1101-2021_02_08_430275	60	94	interval	interval	NN
10_1101-2021_02_08_430275	60	95	of	of	IN
10_1101-2021_02_08_430275	60	96	10	10	CD
10_1101-2021_02_08_430275	60	97	000	000	CD
10_1101-2021_02_08_430275	60	98	simulated	simulate	VBN
10_1101-2021_02_08_430275	60	99	ΔAF	δaf	NN
10_1101-2021_02_08_430275	60	100	values	value	NNS
10_1101-2021_02_08_430275	60	101	was	be	VBD
10_1101-2021_02_08_430275	60	102	used	use	VBN
10_1101-2021_02_08_430275	60	103	as133	as133	CC
10_1101-2021_02_08_430275	60	104	the	the	DT
10_1101-2021_02_08_430275	60	105	threshold	threshold	NN
10_1101-2021_02_08_430275	60	106	for	for	IN
10_1101-2021_02_08_430275	60	107	the	the	DT
10_1101-2021_02_08_430275	60	108	allele	allele	NNP
10_1101-2021_02_08_430275	60	109	frequency	frequency	NN
10_1101-2021_02_08_430275	60	110	method	method	NN
10_1101-2021_02_08_430275	60	111	.	.	.
10_1101-2021_02_08_430275	61	1	For	for	IN
10_1101-2021_02_08_430275	61	2	all	all	DT
10_1101-2021_02_08_430275	61	3	methods,134	methods,134	NN
10_1101-2021_02_08_430275	61	4	the	the	DT
10_1101-2021_02_08_430275	61	5	size	size	NN
10_1101-2021_02_08_430275	61	6	of	of	IN
10_1101-2021_02_08_430275	61	7	the	the	DT
10_1101-2021_02_08_430275	61	8	sliding	slide	VBG
10_1101-2021_02_08_430275	61	9	windows	window	NNS
10_1101-2021_02_08_430275	61	10	is	be	VBZ
10_1101-2021_02_08_430275	61	11	2	2	CD
10_1101-2021_02_08_430275	61	12	Mb	mb	NN
10_1101-2021_02_08_430275	61	13	and	and	CC
10_1101-2021_02_08_430275	61	14	the	the	DT
10_1101-2021_02_08_430275	61	15	incremental	incremental	JJ
10_1101-2021_02_08_430275	61	16	step	step	NN
10_1101-2021_02_08_430275	61	17	is135	is135	NNP
10_1101-2021_02_08_430275	61	18	10	10	CD
10_1101-2021_02_08_430275	61	19	kb	kb	NN
10_1101-2021_02_08_430275	61	20	.	.	.
10_1101-2021_02_08_430275	62	1	In	in	IN
10_1101-2021_02_08_430275	62	2	our	-PRON-	PRP$
10_1101-2021_02_08_430275	62	3	previous	previous	JJ
10_1101-2021_02_08_430275	62	4	work	work	NN
10_1101-2021_02_08_430275	62	5	,	,	,
10_1101-2021_02_08_430275	62	6	a	a	DT
10_1101-2021_02_08_430275	62	7	parent	parent	NN
10_1101-2021_02_08_430275	62	8	was	be	VBD
10_1101-2021_02_08_430275	62	9	the	the	DT
10_1101-2021_02_08_430275	62	10	japonica	japonica	NNP
10_1101-2021_02_08_430275	62	11	rice	rice	NNP
10_1101-2021_02_08_430275	62	12	cultivar136	cultivar136	NNP
10_1101-2021_02_08_430275	62	13	nipponbare	nipponbare	NN
10_1101-2021_02_08_430275	62	14	,	,	,
10_1101-2021_02_08_430275	62	15	and	and	CC
10_1101-2021_02_08_430275	62	16	its	-PRON-	PRP$
10_1101-2021_02_08_430275	62	17	genome	genome	JJ
10_1101-2021_02_08_430275	62	18	sequences	sequence	NNS
10_1101-2021_02_08_430275	62	19	were	be	VBD
10_1101-2021_02_08_430275	62	20	used	use	VBN
10_1101-2021_02_08_430275	62	21	as	as	IN
10_1101-2021_02_08_430275	62	22	the	the	DT
10_1101-2021_02_08_430275	62	23	reference	reference	NN
10_1101-2021_02_08_430275	62	24	137	137	CD
10_1101-2021_02_08_430275	62	25	sequences	sequence	NNS
10_1101-2021_02_08_430275	62	26	for	for	IN
10_1101-2021_02_08_430275	62	27	SNP	SNP	NNP
10_1101-2021_02_08_430275	62	28	/	/	SYM
10_1101-2021_02_08_430275	62	29	InDel	InDel	NNP
10_1101-2021_02_08_430275	62	30	calling	call	VBG
10_1101-2021_02_08_430275	62	31	.	.	.
10_1101-2021_02_08_430275	63	1	In	in	IN
10_1101-2021_02_08_430275	63	2	the	the	DT
10_1101-2021_02_08_430275	63	3	current	current	JJ
10_1101-2021_02_08_430275	63	4	dataset	dataset	NN
10_1101-2021_02_08_430275	63	5	,	,	,
10_1101-2021_02_08_430275	63	6	the	the	DT
10_1101-2021_02_08_430275	63	7	parents	parent	NNS
10_1101-2021_02_08_430275	63	8	138	138	CD
10_1101-2021_02_08_430275	63	9	were	be	VBD
10_1101-2021_02_08_430275	63	10	LD24	LD24	NNP
10_1101-2021_02_08_430275	63	11	and	and	CC
10_1101-2021_02_08_430275	63	12	VialoneNano	VialoneNano	NNP
10_1101-2021_02_08_430275	63	13	;	;	:
10_1101-2021_02_08_430275	63	14	many	many	JJ
10_1101-2021_02_08_430275	63	15	false	false	JJ
10_1101-2021_02_08_430275	63	16	-	-	HYPH
10_1101-2021_02_08_430275	63	17	positive	positive	JJ
10_1101-2021_02_08_430275	63	18	SNPs	snp	NNS
10_1101-2021_02_08_430275	63	19	/	/	SYM
10_1101-2021_02_08_430275	63	20	InDels	indel	NNS
10_1101-2021_02_08_430275	63	21	and	and	CC
10_1101-2021_02_08_430275	63	22	139	139	CD
10_1101-2021_02_08_430275	63	23	heterozygous	heterozygous	JJ
10_1101-2021_02_08_430275	63	24	loci	loci	NN
10_1101-2021_02_08_430275	63	25	in	in	IN
10_1101-2021_02_08_430275	63	26	the	the	DT
10_1101-2021_02_08_430275	63	27	parents	parent	NNS
10_1101-2021_02_08_430275	63	28	would	would	MD
10_1101-2021_02_08_430275	63	29	be	be	VB
10_1101-2021_02_08_430275	63	30	included	include	VBN
10_1101-2021_02_08_430275	63	31	in	in	IN
10_1101-2021_02_08_430275	63	32	the	the	DT
10_1101-2021_02_08_430275	63	33	dataset	dataset	NN
10_1101-2021_02_08_430275	63	34	if	if	IN
10_1101-2021_02_08_430275	63	35	140	140	CD
10_1101-2021_02_08_430275	63	36	analyzing	analyze	VBG
10_1101-2021_02_08_430275	63	37	the	the	DT
10_1101-2021_02_08_430275	63	38	BSA	BSA	NNP
10_1101-2021_02_08_430275	63	39	-	-	HYPH
10_1101-2021_02_08_430275	63	40	Seq	Seq	NNP
10_1101-2021_02_08_430275	63	41	data	datum	NNS
10_1101-2021_02_08_430275	63	42	using	use	VBG
10_1101-2021_02_08_430275	63	43	the	the	DT
10_1101-2021_02_08_430275	63	44	original	original	JJ
10_1101-2021_02_08_430275	63	45	script	script	NN
10_1101-2021_02_08_430275	63	46	.	.	.
10_1101-2021_02_08_430275	64	1	Hence	hence	RB
10_1101-2021_02_08_430275	64	2	,	,	,
10_1101-2021_02_08_430275	64	3	SNP	SNP	NNP
10_1101-2021_02_08_430275	64	4	141	141	CD
10_1101-2021_02_08_430275	64	5	filtering	filtering	NN
10_1101-2021_02_08_430275	64	6	is	be	VBZ
10_1101-2021_02_08_430275	64	7	carried	carry	VBN
10_1101-2021_02_08_430275	64	8	out	out	RP
10_1101-2021_02_08_430275	64	9	a	a	DT
10_1101-2021_02_08_430275	64	10	little	little	JJ
10_1101-2021_02_08_430275	64	11	differently	differently	RB
10_1101-2021_02_08_430275	64	12	from	from	IN
10_1101-2021_02_08_430275	64	13	previously	previously	RB
10_1101-2021_02_08_430275	64	14	described	describe	VBN
10_1101-2021_02_08_430275	64	15	142	142	CD
10_1101-2021_02_08_430275	64	16	(	(	-LRB-
10_1101-2021_02_08_430275	64	17	8)	8)	CD
10_1101-2021_02_08_430275	64	18	,	,	,
10_1101-2021_02_08_430275	64	19	and	and	CC
10_1101-2021_02_08_430275	64	20	its	-PRON-	PRP$
10_1101-2021_02_08_430275	64	21	details	detail	NNS
10_1101-2021_02_08_430275	64	22	are	be	VBP
10_1101-2021_02_08_430275	64	23	below	below	RB
10_1101-2021_02_08_430275	64	24	(	(	-LRB-
10_1101-2021_02_08_430275	64	25	see	see	VB
10_1101-2021_02_08_430275	64	26	Table	table	NN
10_1101-2021_02_08_430275	64	27	S1	S1	NNS
10_1101-2021_02_08_430275	64	28	for	for	IN
10_1101-2021_02_08_430275	64	29	examples	example	NNS
10_1101-2021_02_08_430275	64	30	)	)	-RRB-
10_1101-2021_02_08_430275	64	31	:	:	:
10_1101-2021_02_08_430275	64	32	143	143	CD
10_1101-2021_02_08_430275	64	33	•	•	NN
10_1101-2021_02_08_430275	64	34	Unmapped	unmapped	JJ
10_1101-2021_02_08_430275	64	35	SNPs	snp	NNS
10_1101-2021_02_08_430275	64	36	or	or	CC
10_1101-2021_02_08_430275	64	37	SNPs	snp	NNS
10_1101-2021_02_08_430275	64	38	mapped	map	VBN
10_1101-2021_02_08_430275	64	39	to	to	IN
10_1101-2021_02_08_430275	64	40	the	the	DT
10_1101-2021_02_08_430275	64	41	mitochondrial	mitochondrial	NN
10_1101-2021_02_08_430275	64	42	or	or	CC
10_1101-2021_02_08_430275	64	43	144	144	CD
10_1101-2021_02_08_430275	64	44	chloroplast	chloroplast	NN
10_1101-2021_02_08_430275	64	45	genome	genome	NN
10_1101-2021_02_08_430275	64	46	145	145	CD
10_1101-2021_02_08_430275	64	47	•	•	NN
10_1101-2021_02_08_430275	64	48	SNPs	snp	NNS
10_1101-2021_02_08_430275	64	49	with	with	IN
10_1101-2021_02_08_430275	64	50	an	an	DT
10_1101-2021_02_08_430275	64	51	‘	'	``
10_1101-2021_02_08_430275	64	52	NA	NA	NNP
10_1101-2021_02_08_430275	64	53	’	'	''
10_1101-2021_02_08_430275	64	54	value	value	NN
10_1101-2021_02_08_430275	64	55	in	in	IN
10_1101-2021_02_08_430275	64	56	any	any	DT
10_1101-2021_02_08_430275	64	57	column	column	NN
10_1101-2021_02_08_430275	64	58	of	of	IN
10_1101-2021_02_08_430275	64	59	the	the	DT
10_1101-2021_02_08_430275	64	60	DataFrame	DataFrame	NNP
10_1101-2021_02_08_430275	64	61	146	146	CD
10_1101-2021_02_08_430275	64	62	•	•	NNP
10_1101-2021_02_08_430275	64	63	SNPs	SNPs	NNPS
10_1101-2021_02_08_430275	64	64	with	with	IN
10_1101-2021_02_08_430275	64	65	zero	zero	CD
10_1101-2021_02_08_430275	64	66	REF	REF	NNP
10_1101-2021_02_08_430275	64	67	read	read	NN
10_1101-2021_02_08_430275	64	68	and	and	CC
10_1101-2021_02_08_430275	64	69	a	a	DT
10_1101-2021_02_08_430275	64	70	single	single	JJ
10_1101-2021_02_08_430275	64	71	ALT	ALT	NNP
10_1101-2021_02_08_430275	64	72	allele	allele	NN
10_1101-2021_02_08_430275	64	73	in	in	IN
10_1101-2021_02_08_430275	64	74	both	both	DT
10_1101-2021_02_08_430275	64	75	147	147	CD
10_1101-2021_02_08_430275	64	76	bulks	bulk	NNS
10_1101-2021_02_08_430275	64	77	/	/	SYM
10_1101-2021_02_08_430275	64	78	parents	parent	NNS
10_1101-2021_02_08_430275	64	79	148	148	CD
10_1101-2021_02_08_430275	64	80	•	•	NN
10_1101-2021_02_08_430275	64	81	SNPs	snp	NNS
10_1101-2021_02_08_430275	64	82	with	with	IN
10_1101-2021_02_08_430275	64	83	three	three	CD
10_1101-2021_02_08_430275	64	84	or	or	CC
10_1101-2021_02_08_430275	64	85	more	more	JJR
10_1101-2021_02_08_430275	64	86	ALT	ALT	NNP
10_1101-2021_02_08_430275	64	87	alleles	allele	NNS
10_1101-2021_02_08_430275	64	88	in	in	IN
10_1101-2021_02_08_430275	64	89	any	any	DT
10_1101-2021_02_08_430275	64	90	bulk	bulk	NN
10_1101-2021_02_08_430275	64	91	/	/	SYM
10_1101-2021_02_08_430275	64	92	parent	parent	NN
10_1101-2021_02_08_430275	64	93	149	149	CD
10_1101-2021_02_08_430275	64	94	•	•	NNP
10_1101-2021_02_08_430275	64	95	SNPs	SNPs	NNPS
10_1101-2021_02_08_430275	64	96	with	with	IN
10_1101-2021_02_08_430275	64	97	two	two	CD
10_1101-2021_02_08_430275	64	98	ALT	ALT	NNP
10_1101-2021_02_08_430275	64	99	alleles	allele	NNS
10_1101-2021_02_08_430275	64	100	and	and	CC
10_1101-2021_02_08_430275	64	101	its	-PRON-	PRP$
10_1101-2021_02_08_430275	64	102	REF	REF	NNP
10_1101-2021_02_08_430275	64	103	read	read	NN
10_1101-2021_02_08_430275	64	104	is	be	VBZ
10_1101-2021_02_08_430275	64	105	not	not	RB
10_1101-2021_02_08_430275	64	106	zero	zero	CD
10_1101-2021_02_08_430275	64	107	in	in	IN
10_1101-2021_02_08_430275	64	108	150	150	CD
10_1101-2021_02_08_430275	64	109	any	any	DT
10_1101-2021_02_08_430275	64	110	bulk	bulk	NN
10_1101-2021_02_08_430275	64	111	/	/	SYM
10_1101-2021_02_08_430275	64	112	parent	parent	NN
10_1101-2021_02_08_430275	64	113	151	151	CD
10_1101-2021_02_08_430275	64	114	•	•	NNP
10_1101-2021_02_08_430275	64	115	SNPs	SNPs	NNPS
10_1101-2021_02_08_430275	64	116	in	in	IN
10_1101-2021_02_08_430275	64	117	which	which	WDT
10_1101-2021_02_08_430275	64	118	the	the	DT
10_1101-2021_02_08_430275	64	119	bulk	bulk	NN
10_1101-2021_02_08_430275	64	120	/	/	SYM
10_1101-2021_02_08_430275	64	121	parent	parent	NN
10_1101-2021_02_08_430275	64	122	genotypes	genotype	NNS
10_1101-2021_02_08_430275	64	123	do	do	VBP
10_1101-2021_02_08_430275	64	124	not	not	RB
10_1101-2021_02_08_430275	64	125	agree	agree	VB
10_1101-2021_02_08_430275	64	126	with	with	IN
10_1101-2021_02_08_430275	64	127	152	152	CD
10_1101-2021_02_08_430275	64	128	the	the	DT
10_1101-2021_02_08_430275	64	129	REF	REF	NNP
10_1101-2021_02_08_430275	64	130	/	/	SYM
10_1101-2021_02_08_430275	64	131	ALT	ALT	NNP
10_1101-2021_02_08_430275	64	132	bases	basis	NNS
10_1101-2021_02_08_430275	64	133	153	153	CD
10_1101-2021_02_08_430275	64	134	•	•	NN
10_1101-2021_02_08_430275	64	135	SNPs	snp	NNS
10_1101-2021_02_08_430275	64	136	in	in	IN
10_1101-2021_02_08_430275	64	137	which	which	WDT
10_1101-2021_02_08_430275	64	138	the	the	DT
10_1101-2021_02_08_430275	64	139	bulk	bulk	NN
10_1101-2021_02_08_430275	64	140	/	/	SYM
10_1101-2021_02_08_430275	64	141	parent	parent	NN
10_1101-2021_02_08_430275	64	142	genotypes	genotype	NNS
10_1101-2021_02_08_430275	64	143	are	be	VBP
10_1101-2021_02_08_430275	64	144	not	not	RB
10_1101-2021_02_08_430275	64	145	consistent	consistent	JJ
10_1101-2021_02_08_430275	64	146	154	154	CD
10_1101-2021_02_08_430275	64	147	with	with	IN
10_1101-2021_02_08_430275	64	148	the	the	DT
10_1101-2021_02_08_430275	64	149	AD	ad	NN
10_1101-2021_02_08_430275	64	150	values	value	NNS
10_1101-2021_02_08_430275	64	151	155	155	CD
10_1101-2021_02_08_430275	64	152	•	•	VBP
10_1101-2021_02_08_430275	64	153	SNPs	snp	NNS
10_1101-2021_02_08_430275	64	154	with	with	IN
10_1101-2021_02_08_430275	64	155	a	a	DT
10_1101-2021_02_08_430275	64	156	genotype	genotype	NN
10_1101-2021_02_08_430275	64	157	quality	quality	NN
10_1101-2021_02_08_430275	64	158	(	(	-LRB-
10_1101-2021_02_08_430275	64	159	GQ	GQ	NNP
10_1101-2021_02_08_430275	64	160	)	)	-RRB-
10_1101-2021_02_08_430275	64	161	score	score	VBP
10_1101-2021_02_08_430275	64	162	less	less	JJR
10_1101-2021_02_08_430275	64	163	than	than	IN
10_1101-2021_02_08_430275	64	164	20	20	CD
10_1101-2021_02_08_430275	64	165	in	in	IN
10_1101-2021_02_08_430275	64	166	any	any	DT
10_1101-2021_02_08_430275	64	167	156	156	CD
10_1101-2021_02_08_430275	64	168	bulk	bulk	NN
10_1101-2021_02_08_430275	64	169	157	157	CD
10_1101-2021_02_08_430275	64	170	•	•	NN
10_1101-2021_02_08_430275	64	171	SNPs	snp	NNS
10_1101-2021_02_08_430275	64	172	with	with	IN
10_1101-2021_02_08_430275	64	173	very	very	RB
10_1101-2021_02_08_430275	64	174	high	high	JJ
10_1101-2021_02_08_430275	64	175	reads	read	NNS
10_1101-2021_02_08_430275	64	176	158	158	CD
10_1101-2021_02_08_430275	64	177	•	•	NN
10_1101-2021_02_08_430275	64	178	SNPs	snp	NNS
10_1101-2021_02_08_430275	64	179	heterozygous	heterozygous	JJ
10_1101-2021_02_08_430275	64	180	in	in	IN
10_1101-2021_02_08_430275	64	181	any	any	DT
10_1101-2021_02_08_430275	64	182	parent	parent	NN
10_1101-2021_02_08_430275	64	183	when	when	WRB
10_1101-2021_02_08_430275	64	184	parental	parental	JJ
10_1101-2021_02_08_430275	64	185	genome	genome	NN
10_1101-2021_02_08_430275	64	186	se-	se-	VBP
10_1101-2021_02_08_430275	64	187	159	159	CD
10_1101-2021_02_08_430275	64	188	quences	quence	NNS
10_1101-2021_02_08_430275	64	189	are	be	VBP
10_1101-2021_02_08_430275	64	190	available	available	JJ
10_1101-2021_02_08_430275	64	191	160	160	CD
10_1101-2021_02_08_430275	64	192	Additionally	additionally	RB
10_1101-2021_02_08_430275	64	193	,	,	,
10_1101-2021_02_08_430275	64	194	for	for	IN
10_1101-2021_02_08_430275	64	195	SNPs	snp	NNS
10_1101-2021_02_08_430275	64	196	with	with	IN
10_1101-2021_02_08_430275	64	197	two	two	CD
10_1101-2021_02_08_430275	64	198	ALT	ALT	NNP
10_1101-2021_02_08_430275	64	199	alleles	allele	NNS
10_1101-2021_02_08_430275	64	200	and	and	CC
10_1101-2021_02_08_430275	64	201	zero	zero	CD
10_1101-2021_02_08_430275	64	202	REF	REF	NNP
10_1101-2021_02_08_430275	64	203	read	read	VBD
10_1101-2021_02_08_430275	64	204	161	161	CD
10_1101-2021_02_08_430275	64	205	in	in	IN
10_1101-2021_02_08_430275	64	206	both	both	DT
10_1101-2021_02_08_430275	64	207	bulks	bulk	NNS
10_1101-2021_02_08_430275	64	208	/	/	SYM
10_1101-2021_02_08_430275	64	209	parents	parent	NNS
10_1101-2021_02_08_430275	64	210	,	,	,
10_1101-2021_02_08_430275	64	211	the	the	DT
10_1101-2021_02_08_430275	64	212	REF	REF	NNP
10_1101-2021_02_08_430275	64	213	allele	allele	NNP
10_1101-2021_02_08_430275	64	214	is	be	VBZ
10_1101-2021_02_08_430275	64	215	replaced	replace	VBN
10_1101-2021_02_08_430275	64	216	with	with	IN
10_1101-2021_02_08_430275	64	217	the	the	DT
10_1101-2021_02_08_430275	64	218	first	first	JJ
10_1101-2021_02_08_430275	64	219	allele	allele	NNP
10_1101-2021_02_08_430275	64	220	162	162	CD
10_1101-2021_02_08_430275	64	221	in	in	IN
10_1101-2021_02_08_430275	64	222	the	the	DT
10_1101-2021_02_08_430275	64	223	‘	'	``
10_1101-2021_02_08_430275	64	224	ALT	ALT	NNP
10_1101-2021_02_08_430275	64	225	’	'	''
10_1101-2021_02_08_430275	64	226	field	field	NN
10_1101-2021_02_08_430275	64	227	,	,	,
10_1101-2021_02_08_430275	64	228	its	-PRON-	PRP$
10_1101-2021_02_08_430275	64	229	ALT	ALT	NNP
10_1101-2021_02_08_430275	64	230	allele	allele	NNP
10_1101-2021_02_08_430275	64	231	is	be	VBZ
10_1101-2021_02_08_430275	64	232	replaced	replace	VBN
10_1101-2021_02_08_430275	64	233	with	with	IN
10_1101-2021_02_08_430275	64	234	the	the	DT
10_1101-2021_02_08_430275	64	235	second	second	JJ
10_1101-2021_02_08_430275	64	236	allele	allele	NNP
10_1101-2021_02_08_430275	64	237	163	163	CD
10_1101-2021_02_08_430275	64	238	in	in	IN
10_1101-2021_02_08_430275	64	239	the	the	DT
10_1101-2021_02_08_430275	64	240	original	original	JJ
10_1101-2021_02_08_430275	64	241	‘	'	``
10_1101-2021_02_08_430275	64	242	ALT	ALT	NNP
10_1101-2021_02_08_430275	64	243	’	'	''
10_1101-2021_02_08_430275	64	244	field	field	NN
10_1101-2021_02_08_430275	64	245	.	.	.
10_1101-2021_02_08_430275	65	1	The	the	DT
10_1101-2021_02_08_430275	65	2	REF	REF	NNP
10_1101-2021_02_08_430275	65	3	read	read	VBD
10_1101-2021_02_08_430275	65	4	,	,	,
10_1101-2021_02_08_430275	65	5	and	and	CC
10_1101-2021_02_08_430275	65	6	a	a	DT
10_1101-2021_02_08_430275	65	7	comma	comma	NN
10_1101-2021_02_08_430275	65	8	after	after	IN
10_1101-2021_02_08_430275	65	9	it	-PRON-	PRP
10_1101-2021_02_08_430275	65	10	,	,	,
10_1101-2021_02_08_430275	65	11	164	164	CD
10_1101-2021_02_08_430275	65	12	are	be	VBP
10_1101-2021_02_08_430275	65	13	removed	remove	VBN
10_1101-2021_02_08_430275	65	14	from	from	IN
10_1101-2021_02_08_430275	65	15	both	both	CC
10_1101-2021_02_08_430275	65	16	the	the	DT
10_1101-2021_02_08_430275	65	17	allele	allele	NNP
10_1101-2021_02_08_430275	65	18	depth	depth	NN
10_1101-2021_02_08_430275	65	19	(	(	-LRB-
10_1101-2021_02_08_430275	65	20	AD	ad	NN
10_1101-2021_02_08_430275	65	21	)	)	-RRB-
10_1101-2021_02_08_430275	65	22	fields	field	NNS
10_1101-2021_02_08_430275	65	23	(	(	-LRB-
10_1101-2021_02_08_430275	65	24	one	one	CD
10_1101-2021_02_08_430275	65	25	for	for	IN
10_1101-2021_02_08_430275	65	26	each	each	DT
10_1101-2021_02_08_430275	65	27	165	165	CD
10_1101-2021_02_08_430275	65	28	bulk	bulk	NN
10_1101-2021_02_08_430275	65	29	/	/	SYM
10_1101-2021_02_08_430275	65	30	parent	parent	NN
10_1101-2021_02_08_430275	65	31	)	)	-RRB-
10_1101-2021_02_08_430275	65	32	.	.	.
10_1101-2021_02_08_430275	66	1	This	this	DT
10_1101-2021_02_08_430275	66	2	step	step	NN
10_1101-2021_02_08_430275	66	3	is	be	VBZ
10_1101-2021_02_08_430275	66	4	carried	carry	VBN
10_1101-2021_02_08_430275	66	5	out	out	RP
10_1101-2021_02_08_430275	66	6	before	before	IN
10_1101-2021_02_08_430275	66	7	checking	check	VBG
10_1101-2021_02_08_430275	66	8	the	the	DT
10_1101-2021_02_08_430275	66	9	genotype	genotype	NN
10_1101-2021_02_08_430275	66	10	166	166	CD
10_1101-2021_02_08_430275	66	11	agreement	agreement	NN
10_1101-2021_02_08_430275	66	12	between	between	IN
10_1101-2021_02_08_430275	66	13	bulks	bulk	NNS
10_1101-2021_02_08_430275	66	14	and	and	CC
10_1101-2021_02_08_430275	66	15	the	the	DT
10_1101-2021_02_08_430275	66	16	REF	REF	NNP
10_1101-2021_02_08_430275	66	17	/	/	SYM
10_1101-2021_02_08_430275	66	18	ALT	ALT	NNP
10_1101-2021_02_08_430275	66	19	fields	field	NNS
10_1101-2021_02_08_430275	66	20	.	.	.
10_1101-2021_02_08_430275	67	1	When	when	WRB
10_1101-2021_02_08_430275	67	2	parental	parental	JJ
10_1101-2021_02_08_430275	67	3	167	167	CD
10_1101-2021_02_08_430275	67	4	genome	genome	JJ
10_1101-2021_02_08_430275	67	5	sequences	sequence	NNS
10_1101-2021_02_08_430275	67	6	are	be	VBP
10_1101-2021_02_08_430275	67	7	involved	involve	VBN
10_1101-2021_02_08_430275	67	8	,	,	,
10_1101-2021_02_08_430275	67	9	the	the	DT
10_1101-2021_02_08_430275	67	10	common	common	JJ
10_1101-2021_02_08_430275	67	11	SNP	SNP	NNP
10_1101-2021_02_08_430275	67	12	set	set	NN
10_1101-2021_02_08_430275	67	13	is	be	VBZ
10_1101-2021_02_08_430275	67	14	identified	identify	VBN
10_1101-2021_02_08_430275	67	15	168	168	CD
10_1101-2021_02_08_430275	67	16	before	before	IN
10_1101-2021_02_08_430275	67	17	filtering	filter	VBG
10_1101-2021_02_08_430275	67	18	out	out	RP
10_1101-2021_02_08_430275	67	19	the	the	DT
10_1101-2021_02_08_430275	67	20	SNPs	snp	NNS
10_1101-2021_02_08_430275	67	21	with	with	IN
10_1101-2021_02_08_430275	67	22	a	a	DT
10_1101-2021_02_08_430275	67	23	low	low	JJ
10_1101-2021_02_08_430275	67	24	GQ	GQ	NNP
10_1101-2021_02_08_430275	67	25	score	score	NN
10_1101-2021_02_08_430275	67	26	in	in	IN
10_1101-2021_02_08_430275	67	27	the	the	DT
10_1101-2021_02_08_430275	67	28	parental	parental	JJ
10_1101-2021_02_08_430275	67	29	169	169	CD
10_1101-2021_02_08_430275	67	30	SNP	SNP	NNP
10_1101-2021_02_08_430275	67	31	dataset	dataset	NN
10_1101-2021_02_08_430275	67	32	.	.	.
10_1101-2021_02_08_430275	68	1	170	170	CD
10_1101-2021_02_08_430275	68	2	The	the	DT
10_1101-2021_02_08_430275	68	3	tightly	tightly	RB
10_1101-2021_02_08_430275	68	4	linked	link	VBN
10_1101-2021_02_08_430275	68	5	SNP	SNP	NNP
10_1101-2021_02_08_430275	68	6	alleles	allele	NNS
10_1101-2021_02_08_430275	68	7	from	from	IN
10_1101-2021_02_08_430275	68	8	the	the	DT
10_1101-2021_02_08_430275	68	9	same	same	JJ
10_1101-2021_02_08_430275	68	10	parent	parent	NN
10_1101-2021_02_08_430275	68	11	tend	tend	VB
10_1101-2021_02_08_430275	68	12	to	to	IN
10_1101-2021_02_08_430275	68	13	171	171	CD
10_1101-2021_02_08_430275	68	14	segregate	segregate	NN
10_1101-2021_02_08_430275	68	15	together	together	RB
10_1101-2021_02_08_430275	68	16	and	and	CC
10_1101-2021_02_08_430275	68	17	should	should	MD
10_1101-2021_02_08_430275	68	18	have	have	VB
10_1101-2021_02_08_430275	68	19	a	a	DT
10_1101-2021_02_08_430275	68	20	similar	similar	JJ
10_1101-2021_02_08_430275	68	21	extent	extent	NN
10_1101-2021_02_08_430275	68	22	of	of	IN
10_1101-2021_02_08_430275	68	23	allele	allele	NNP
10_1101-2021_02_08_430275	68	24	enrich-	enrich-	VBG
10_1101-2021_02_08_430275	68	25	172	172	CD
10_1101-2021_02_08_430275	68	26	ment	ment	NN
10_1101-2021_02_08_430275	68	27	,	,	,
10_1101-2021_02_08_430275	68	28	and	and	CC
10_1101-2021_02_08_430275	68	29	thus	thus	RB
10_1101-2021_02_08_430275	68	30	similar	similar	JJ
10_1101-2021_02_08_430275	68	31	AD	ad	NN
10_1101-2021_02_08_430275	68	32	values	value	NNS
10_1101-2021_02_08_430275	68	33	.	.	.
10_1101-2021_02_08_430275	69	1	In	in	IN
10_1101-2021_02_08_430275	69	2	a	a	DT
10_1101-2021_02_08_430275	69	3	SNP	SNP	NNP
10_1101-2021_02_08_430275	69	4	dataset	dataset	NN
10_1101-2021_02_08_430275	69	5	,	,	,
10_1101-2021_02_08_430275	69	6	the	the	DT
10_1101-2021_02_08_430275	69	7	genotypes	genotype	NNS
10_1101-2021_02_08_430275	69	8	173	173	CD
10_1101-2021_02_08_430275	69	9	of	of	IN
10_1101-2021_02_08_430275	69	10	each	each	DT
10_1101-2021_02_08_430275	69	11	bulk	bulk	NN
10_1101-2021_02_08_430275	69	12	/	/	SYM
10_1101-2021_02_08_430275	69	13	parent	parent	NN
10_1101-2021_02_08_430275	69	14	are	be	VBP
10_1101-2021_02_08_430275	69	15	represented	represent	VBN
10_1101-2021_02_08_430275	69	16	as	as	IN
10_1101-2021_02_08_430275	69	17	‘	'	``
10_1101-2021_02_08_430275	69	18	GTref	GTref	NNP
10_1101-2021_02_08_430275	69	19	/	/	SYM
10_1101-2021_02_08_430275	69	20	GTalt	GTalt	NNP
10_1101-2021_02_08_430275	69	21	’	'	''
10_1101-2021_02_08_430275	69	22	when	when	WRB
10_1101-2021_02_08_430275	69	23	a	a	DT
10_1101-2021_02_08_430275	69	24	SNP	SNP	NNP
10_1101-2021_02_08_430275	69	25	174	174	CD
10_1101-2021_02_08_430275	69	26	contains	contain	VBZ
10_1101-2021_02_08_430275	69	27	both	both	CC
10_1101-2021_02_08_430275	69	28	the	the	DT
10_1101-2021_02_08_430275	69	29	REF	REF	NNP
10_1101-2021_02_08_430275	69	30	base	base	NN
10_1101-2021_02_08_430275	69	31	and	and	CC
10_1101-2021_02_08_430275	69	32	the	the	DT
10_1101-2021_02_08_430275	69	33	ALT	ALT	NNP
10_1101-2021_02_08_430275	69	34	base	base	NN
10_1101-2021_02_08_430275	69	35	in	in	IN
10_1101-2021_02_08_430275	69	36	the	the	DT
10_1101-2021_02_08_430275	69	37	genotype	genotype	NN
10_1101-2021_02_08_430275	69	38	175	175	CD
10_1101-2021_02_08_430275	69	39	(	(	-LRB-
10_1101-2021_02_08_430275	69	40	GT	GT	NNP
10_1101-2021_02_08_430275	69	41	)	)	-RRB-
10_1101-2021_02_08_430275	69	42	field	field	NN
10_1101-2021_02_08_430275	69	43	,	,	,
10_1101-2021_02_08_430275	69	44	and	and	CC
10_1101-2021_02_08_430275	69	45	the	the	DT
10_1101-2021_02_08_430275	69	46	AD	ad	NN
10_1101-2021_02_08_430275	69	47	values	value	NNS
10_1101-2021_02_08_430275	69	48	in	in	IN
10_1101-2021_02_08_430275	69	49	each	each	DT
10_1101-2021_02_08_430275	69	50	bulk	bulk	NN
10_1101-2021_02_08_430275	69	51	/	/	SYM
10_1101-2021_02_08_430275	69	52	parent	parent	NN
10_1101-2021_02_08_430275	69	53	is	be	VBZ
10_1101-2021_02_08_430275	69	54	represented	represent	VBN
10_1101-2021_02_08_430275	69	55	as	as	IN
10_1101-2021_02_08_430275	69	56	176	176	CD
10_1101-2021_02_08_430275	69	57	‘	'	``
10_1101-2021_02_08_430275	69	58	ADref	ADref	NNP
10_1101-2021_02_08_430275	69	59	,	,	,
10_1101-2021_02_08_430275	69	60	ADalt	ADalt	NNP
10_1101-2021_02_08_430275	69	61	’	'	''
10_1101-2021_02_08_430275	69	62	.	.	.
10_1101-2021_02_08_430275	70	1	The	the	DT
10_1101-2021_02_08_430275	70	2	genotype	genotype	NN
10_1101-2021_02_08_430275	70	3	and	and	CC
10_1101-2021_02_08_430275	70	4	the	the	DT
10_1101-2021_02_08_430275	70	5	AD	ad	NN
10_1101-2021_02_08_430275	70	6	value	value	NN
10_1101-2021_02_08_430275	70	7	of	of	IN
10_1101-2021_02_08_430275	70	8	the	the	DT
10_1101-2021_02_08_430275	70	9	REF	REF	NNP
10_1101-2021_02_08_430275	70	10	allele	allele	NNP
10_1101-2021_02_08_430275	70	11	are	be	VBP
10_1101-2021_02_08_430275	70	12	177	177	CD
10_1101-2021_02_08_430275	70	13	always	always	RB
10_1101-2021_02_08_430275	70	14	placed	place	VBN
10_1101-2021_02_08_430275	70	15	first	first	RB
10_1101-2021_02_08_430275	70	16	in	in	IN
10_1101-2021_02_08_430275	70	17	both	both	DT
10_1101-2021_02_08_430275	70	18	fields	field	NNS
10_1101-2021_02_08_430275	70	19	.	.	.
10_1101-2021_02_08_430275	71	1	For	for	IN
10_1101-2021_02_08_430275	71	2	a	a	DT
10_1101-2021_02_08_430275	71	3	SNP	SNP	NNP
10_1101-2021_02_08_430275	71	4	locus	locus	NN
10_1101-2021_02_08_430275	71	5	in	in	IN
10_1101-2021_02_08_430275	71	6	the	the	DT
10_1101-2021_02_08_430275	71	7	.tsv	.tsv	CD
10_1101-2021_02_08_430275	71	8	input	input	NN
10_1101-2021_02_08_430275	71	9	178	178	CD
10_1101-2021_02_08_430275	71	10	file	file	NN
10_1101-2021_02_08_430275	71	11	,	,	,
10_1101-2021_02_08_430275	71	12	the	the	DT
10_1101-2021_02_08_430275	71	13	allele	allele	NNP
10_1101-2021_02_08_430275	71	14	having	have	VBG
10_1101-2021_02_08_430275	71	15	the	the	DT
10_1101-2021_02_08_430275	71	16	same	same	JJ
10_1101-2021_02_08_430275	71	17	genotype	genotype	NN
10_1101-2021_02_08_430275	71	18	as	as	IN
10_1101-2021_02_08_430275	71	19	that	that	DT
10_1101-2021_02_08_430275	71	20	in	in	IN
10_1101-2021_02_08_430275	71	21	the	the	DT
10_1101-2021_02_08_430275	71	22	reference	reference	NN
10_1101-2021_02_08_430275	71	23	179	179	CD
10_1101-2021_02_08_430275	71	24	genome	genome	NN
10_1101-2021_02_08_430275	71	25	is	be	VBZ
10_1101-2021_02_08_430275	71	26	defined	define	VBN
10_1101-2021_02_08_430275	71	27	as	as	IN
10_1101-2021_02_08_430275	71	28	the	the	DT
10_1101-2021_02_08_430275	71	29	REF	REF	NNP
10_1101-2021_02_08_430275	71	30	allele	allele	NNP
10_1101-2021_02_08_430275	71	31	.	.	.
10_1101-2021_02_08_430275	72	1	However	however	RB
10_1101-2021_02_08_430275	72	2	,	,	,
10_1101-2021_02_08_430275	72	3	it	-PRON-	PRP
10_1101-2021_02_08_430275	72	4	is	be	VBZ
10_1101-2021_02_08_430275	72	5	highly	highly	RB
10_1101-2021_02_08_430275	72	6	unlikely	unlikely	JJ
10_1101-2021_02_08_430275	72	7	180	180	CD
10_1101-2021_02_08_430275	72	8	that	that	IN
10_1101-2021_02_08_430275	72	9	all	all	DT
10_1101-2021_02_08_430275	72	10	of	of	IN
10_1101-2021_02_08_430275	72	11	the	the	DT
10_1101-2021_02_08_430275	72	12	SNP	SNP	NNP
10_1101-2021_02_08_430275	72	13	alleles	allele	NNS
10_1101-2021_02_08_430275	72	14	in	in	IN
10_1101-2021_02_08_430275	72	15	a	a	DT
10_1101-2021_02_08_430275	72	16	parent	parent	NN
10_1101-2021_02_08_430275	72	17	are	be	VBP
10_1101-2021_02_08_430275	72	18	the	the	DT
10_1101-2021_02_08_430275	72	19	same	same	JJ
10_1101-2021_02_08_430275	72	20	as	as	IN
10_1101-2021_02_08_430275	72	21	those	those	DT
10_1101-2021_02_08_430275	72	22	in	in	IN
10_1101-2021_02_08_430275	72	23	181	181	CD
10_1101-2021_02_08_430275	72	24	the	the	DT
10_1101-2021_02_08_430275	72	25	reference	reference	NN
10_1101-2021_02_08_430275	72	26	genome	genome	NN
10_1101-2021_02_08_430275	72	27	,	,	,
10_1101-2021_02_08_430275	72	28	except	except	IN
10_1101-2021_02_08_430275	72	29	in	in	IN
10_1101-2021_02_08_430275	72	30	instances	instance	NNS
10_1101-2021_02_08_430275	72	31	where	where	WRB
10_1101-2021_02_08_430275	72	32	reference	reference	NN
10_1101-2021_02_08_430275	72	33	genome	genome	NN
10_1101-2021_02_08_430275	72	34	182	182	CD
10_1101-2021_02_08_430275	72	35	sequences	sequence	NNS
10_1101-2021_02_08_430275	72	36	used	use	VBN
10_1101-2021_02_08_430275	72	37	in	in	IN
10_1101-2021_02_08_430275	72	38	SNP	SNP	NNP
10_1101-2021_02_08_430275	72	39	calling	call	VBG
10_1101-2021_02_08_430275	72	40	are	be	VBP
10_1101-2021_02_08_430275	72	41	from	from	IN
10_1101-2021_02_08_430275	72	42	one	one	CD
10_1101-2021_02_08_430275	72	43	of	of	IN
10_1101-2021_02_08_430275	72	44	the	the	DT
10_1101-2021_02_08_430275	72	45	parents	parent	NNS
10_1101-2021_02_08_430275	72	46	as	as	IN
10_1101-2021_02_08_430275	72	47	in	in	IN
10_1101-2021_02_08_430275	72	48	183	183	CD
10_1101-2021_02_08_430275	72	49	the	the	DT
10_1101-2021_02_08_430275	72	50	case	case	NN
10_1101-2021_02_08_430275	72	51	of	of	IN
10_1101-2021_02_08_430275	72	52	the	the	DT
10_1101-2021_02_08_430275	72	53	cold	cold	JJ
10_1101-2021_02_08_430275	72	54	-	-	HYPH
10_1101-2021_02_08_430275	72	55	tolerance	tolerance	NN
10_1101-2021_02_08_430275	72	56	study	study	NN
10_1101-2021_02_08_430275	72	57	as	as	IN
10_1101-2021_02_08_430275	72	58	mentioned	mention	VBN
10_1101-2021_02_08_430275	72	59	above	above	RB
10_1101-2021_02_08_430275	72	60	(	(	-LRB-
10_1101-2021_02_08_430275	72	61	9	9	CD
10_1101-2021_02_08_430275	72	62	)	)	-RRB-
10_1101-2021_02_08_430275	72	63	.	.	.
10_1101-2021_02_08_430275	73	1	It	-PRON-	PRP
10_1101-2021_02_08_430275	73	2	is	be	VBZ
10_1101-2021_02_08_430275	73	3	184	184	CD
10_1101-2021_02_08_430275	73	4	necessary	necessary	JJ
10_1101-2021_02_08_430275	73	5	to	to	TO
10_1101-2021_02_08_430275	73	6	place	place	VB
10_1101-2021_02_08_430275	73	7	the	the	DT
10_1101-2021_02_08_430275	73	8	genotypes	genotype	NNS
10_1101-2021_02_08_430275	73	9	and	and	CC
10_1101-2021_02_08_430275	73	10	AD	ad	NN
10_1101-2021_02_08_430275	73	11	values	value	NNS
10_1101-2021_02_08_430275	73	12	of	of	IN
10_1101-2021_02_08_430275	73	13	all	all	DT
10_1101-2021_02_08_430275	73	14	SNP	SNP	NNP
10_1101-2021_02_08_430275	73	15	alleles	allele	VBZ
10_1101-2021_02_08_430275	73	16	185	185	CD
10_1101-2021_02_08_430275	73	17	from	from	IN
10_1101-2021_02_08_430275	73	18	one	one	CD
10_1101-2021_02_08_430275	73	19	parent	parent	NN
10_1101-2021_02_08_430275	73	20	(	(	-LRB-
10_1101-2021_02_08_430275	73	21	e.g.	e.g.	RB
10_1101-2021_02_08_430275	73	22	,	,	,
10_1101-2021_02_08_430275	73	23	LD24	LD24	NNP
10_1101-2021_02_08_430275	73	24	)	)	-RRB-
10_1101-2021_02_08_430275	73	25	in	in	IN
10_1101-2021_02_08_430275	73	26	the	the	DT
10_1101-2021_02_08_430275	73	27	REF	REF	NNP
10_1101-2021_02_08_430275	73	28	position	position	NN
10_1101-2021_02_08_430275	73	29	,	,	,
10_1101-2021_02_08_430275	73	30	and	and	CC
10_1101-2021_02_08_430275	73	31	those	those	DT
10_1101-2021_02_08_430275	73	32	from	from	IN
10_1101-2021_02_08_430275	73	33	186	186	CD
10_1101-2021_02_08_430275	73	34	the	the	DT
10_1101-2021_02_08_430275	73	35	other	other	JJ
10_1101-2021_02_08_430275	73	36	parent	parent	NN
10_1101-2021_02_08_430275	73	37	(	(	-LRB-
10_1101-2021_02_08_430275	73	38	e.g.	e.g.	RB
10_1101-2021_02_08_430275	73	39	,	,	,
10_1101-2021_02_08_430275	73	40	VialoneNano	VialoneNano	NNP
10_1101-2021_02_08_430275	73	41	)	)	-RRB-
10_1101-2021_02_08_430275	73	42	to	to	IN
10_1101-2021_02_08_430275	73	43	the	the	DT
10_1101-2021_02_08_430275	73	44	ALT	ALT	NNP
10_1101-2021_02_08_430275	73	45	position	position	NN
10_1101-2021_02_08_430275	73	46	in	in	IN
10_1101-2021_02_08_430275	73	47	the	the	DT
10_1101-2021_02_08_430275	73	48	187	187	CD
10_1101-2021_02_08_430275	73	49	GT	GT	NNP
10_1101-2021_02_08_430275	73	50	and	and	CC
10_1101-2021_02_08_430275	73	51	AD	ad	NN
10_1101-2021_02_08_430275	73	52	fields	field	NNS
10_1101-2021_02_08_430275	73	53	to	to	TO
10_1101-2021_02_08_430275	73	54	make	make	VB
10_1101-2021_02_08_430275	73	55	the	the	DT
10_1101-2021_02_08_430275	73	56	bulk	bulk	JJ
10_1101-2021_02_08_430275	73	57	dataset	dataset	NN
10_1101-2021_02_08_430275	73	58	consistent	consistent	NNP
10_1101-2021_02_08_430275	73	59	.	.	.
10_1101-2021_02_08_430275	74	1	Thus	thus	RB
10_1101-2021_02_08_430275	74	2	,	,	,
10_1101-2021_02_08_430275	74	3	for	for	IN
10_1101-2021_02_08_430275	74	4	188	188	CD
10_1101-2021_02_08_430275	74	5	a	a	DT
10_1101-2021_02_08_430275	74	6	particular	particular	JJ
10_1101-2021_02_08_430275	74	7	SNP	snp	NN
10_1101-2021_02_08_430275	74	8	,	,	,
10_1101-2021_02_08_430275	74	9	if	if	IN
10_1101-2021_02_08_430275	74	10	the	the	DT
10_1101-2021_02_08_430275	74	11	REF	REF	NNP
10_1101-2021_02_08_430275	74	12	base	base	NN
10_1101-2021_02_08_430275	74	13	in	in	IN
10_1101-2021_02_08_430275	74	14	the	the	DT
10_1101-2021_02_08_430275	74	15	.tsv	.tsv	CD
10_1101-2021_02_08_430275	74	16	file	file	NN
10_1101-2021_02_08_430275	74	17	is	be	VBZ
10_1101-2021_02_08_430275	74	18	different	different	JJ
10_1101-2021_02_08_430275	74	19	from	from	IN
10_1101-2021_02_08_430275	74	20	189	189	CD
10_1101-2021_02_08_430275	74	21	the	the	DT
10_1101-2021_02_08_430275	74	22	genotype	genotype	NN
10_1101-2021_02_08_430275	74	23	of	of	IN
10_1101-2021_02_08_430275	74	24	LD24	LD24	NNP
10_1101-2021_02_08_430275	74	25	(	(	-LRB-
10_1101-2021_02_08_430275	74	26	either	either	CC
10_1101-2021_02_08_430275	74	27	parent	parent	NN
10_1101-2021_02_08_430275	74	28	will	will	MD
10_1101-2021_02_08_430275	74	29	work	work	VB
10_1101-2021_02_08_430275	74	30	)	)	-RRB-
10_1101-2021_02_08_430275	74	31	,	,	,
10_1101-2021_02_08_430275	74	32	its	-PRON-	PRP$
10_1101-2021_02_08_430275	74	33	GT	GT	NNP
10_1101-2021_02_08_430275	74	34	/	/	,
10_1101-2021_02_08_430275	74	35	AD	ad	NN
10_1101-2021_02_08_430275	74	36	values	value	NNS
10_1101-2021_02_08_430275	74	37	190	190	CD
10_1101-2021_02_08_430275	74	38	would	would	MD
10_1101-2021_02_08_430275	74	39	be	be	VB
10_1101-2021_02_08_430275	74	40	swapped	swap	VBN
10_1101-2021_02_08_430275	74	41	,	,	,
10_1101-2021_02_08_430275	74	42	e.g.	e.g.	RB
10_1101-2021_02_08_430275	74	43	,	,	,
10_1101-2021_02_08_430275	74	44	‘	'	``
10_1101-2021_02_08_430275	74	45	G	g	NN
10_1101-2021_02_08_430275	74	46	/	/	,
10_1101-2021_02_08_430275	74	47	A	A	NNP
10_1101-2021_02_08_430275	74	48	’	'	''
10_1101-2021_02_08_430275	74	49	to	to	TO
10_1101-2021_02_08_430275	74	50	‘	'	``
10_1101-2021_02_08_430275	74	51	A	a	NN
10_1101-2021_02_08_430275	74	52	/	/	SYM
10_1101-2021_02_08_430275	74	53	G	g	NN
10_1101-2021_02_08_430275	74	54	’	'	''
10_1101-2021_02_08_430275	74	55	and	and	CC
10_1101-2021_02_08_430275	74	56	‘	'	``
10_1101-2021_02_08_430275	74	57	19,9	19,9	NNS
10_1101-2021_02_08_430275	74	58	’	'	''
10_1101-2021_02_08_430275	74	59	to	to	IN
10_1101-2021_02_08_430275	74	60	‘	'	``
10_1101-2021_02_08_430275	74	61	9,19	9,19	CD
10_1101-2021_02_08_430275	74	62	’	'	''
10_1101-2021_02_08_430275	74	63	.	.	.
10_1101-2021_02_08_430275	75	1	AD	ad	NN
10_1101-2021_02_08_430275	75	2	/	/	SYM
10_1101-2021_02_08_430275	75	3	GT	GT	NNP
10_1101-2021_02_08_430275	75	4	191	191	CD
10_1101-2021_02_08_430275	75	5	swapping	swap	VBG
10_1101-2021_02_08_430275	75	6	is	be	VBZ
10_1101-2021_02_08_430275	75	7	performed	perform	VBN
10_1101-2021_02_08_430275	75	8	following	follow	VBG
10_1101-2021_02_08_430275	75	9	SNP	SNP	NNP
10_1101-2021_02_08_430275	75	10	filtering	filtering	NN
10_1101-2021_02_08_430275	75	11	and	and	CC
10_1101-2021_02_08_430275	75	12	is	be	VBZ
10_1101-2021_02_08_430275	75	13	performed	perform	VBN
10_1101-2021_02_08_430275	75	14	only	only	RB
10_1101-2021_02_08_430275	75	15	192	192	CD
10_1101-2021_02_08_430275	75	16	when	when	WRB
10_1101-2021_02_08_430275	75	17	the	the	DT
10_1101-2021_02_08_430275	75	18	parental	parental	JJ
10_1101-2021_02_08_430275	75	19	genome	genome	NN
10_1101-2021_02_08_430275	75	20	sequences	sequence	NNS
10_1101-2021_02_08_430275	75	21	are	be	VBP
10_1101-2021_02_08_430275	75	22	used	use	VBN
10_1101-2021_02_08_430275	75	23	to	to	TO
10_1101-2021_02_08_430275	75	24	aid	aid	VB
10_1101-2021_02_08_430275	75	25	BSA	BSA	NNP
10_1101-2021_02_08_430275	75	26	-	-	HYPH
10_1101-2021_02_08_430275	75	27	Seq	Seq	NNP
10_1101-2021_02_08_430275	75	28	data	datum	NNS
10_1101-2021_02_08_430275	75	29	193	193	CD
10_1101-2021_02_08_430275	75	30	analysis	analysis	NN
10_1101-2021_02_08_430275	75	31	.	.	.
10_1101-2021_02_08_430275	76	1	Equation	equation	NN
10_1101-2021_02_08_430275	76	2	1	1	CD
10_1101-2021_02_08_430275	76	3	is	be	VBZ
10_1101-2021_02_08_430275	76	4	used	use	VBN
10_1101-2021_02_08_430275	76	5	for	for	IN
10_1101-2021_02_08_430275	76	6	ΔAF	δaf	NN
10_1101-2021_02_08_430275	76	7	calculation	calculation	NN
10_1101-2021_02_08_430275	76	8	.	.	.
10_1101-2021_02_08_430275	77	1	AD	ad	NN
10_1101-2021_02_08_430275	77	2	swapping	swap	VBG
10_1101-2021_02_08_430275	77	3	194	194	CD
10_1101-2021_02_08_430275	77	4	ensures	ensure	NNS
10_1101-2021_02_08_430275	77	5	that	that	IN
10_1101-2021_02_08_430275	77	6	adjacent	adjacent	JJ
10_1101-2021_02_08_430275	77	7	SNPs	snp	NNS
10_1101-2021_02_08_430275	77	8	have	have	VBP
10_1101-2021_02_08_430275	77	9	similar	similar	JJ
10_1101-2021_02_08_430275	77	10	ΔAF	δaf	NN
10_1101-2021_02_08_430275	77	11	values	value	NNS
10_1101-2021_02_08_430275	77	12	.	.	.
10_1101-2021_02_08_430275	78	1	195	195	CD
10_1101-2021_02_08_430275	78	2	∆AF	∆AF	NNP
10_1101-2021_02_08_430275	78	3	=	=	SYM
10_1101-2021_02_08_430275	78	4	ADalt2	ADalt2	NNP
10_1101-2021_02_08_430275	78	5	ADref	ADref	NNP
10_1101-2021_02_08_430275	78	6	2	2	CD
10_1101-2021_02_08_430275	78	7	+	+	NNP
10_1101-2021_02_08_430275	78	8	ADalt2	ADalt2	NNP
10_1101-2021_02_08_430275	78	9	−	−	NNP
10_1101-2021_02_08_430275	78	10	ADalt1	ADalt1	NNP
10_1101-2021_02_08_430275	78	11	ADref	ADref	NNP
10_1101-2021_02_08_430275	78	12	1	1	CD
10_1101-2021_02_08_430275	78	13	+	+	SYM
10_1101-2021_02_08_430275	78	14	ADalt1	ADalt1	NNP
10_1101-2021_02_08_430275	78	15	[	[	-LRB-
10_1101-2021_02_08_430275	78	16	1	1	CD
10_1101-2021_02_08_430275	78	17	]	]	-RRB-
10_1101-2021_02_08_430275	78	18	196	196	CD
10_1101-2021_02_08_430275	78	19	197	197	CD
10_1101-2021_02_08_430275	78	20	Results	result	NNS
10_1101-2021_02_08_430275	78	21	198	198	CD
10_1101-2021_02_08_430275	78	22	The	the	DT
10_1101-2021_02_08_430275	78	23	original	original	JJ
10_1101-2021_02_08_430275	78	24	sequence	sequence	NN
10_1101-2021_02_08_430275	78	25	reads	read	VBZ
10_1101-2021_02_08_430275	78	26	were	be	VBD
10_1101-2021_02_08_430275	78	27	3.9	3.9	CD
10_1101-2021_02_08_430275	78	28	G	g	NN
10_1101-2021_02_08_430275	78	29	,	,	,
10_1101-2021_02_08_430275	78	30	3.8	3.8	CD
10_1101-2021_02_08_430275	78	31	G	g	NN
10_1101-2021_02_08_430275	78	32	,	,	,
10_1101-2021_02_08_430275	78	33	3.4	3.4	CD
10_1101-2021_02_08_430275	78	34	G	g	NN
10_1101-2021_02_08_430275	78	35	,	,	,
10_1101-2021_02_08_430275	78	36	and	and	CC
10_1101-2021_02_08_430275	78	37	3.5	3.5	CD
10_1101-2021_02_08_430275	78	38	G	g	NN
10_1101-2021_02_08_430275	78	39	;	;	:
10_1101-2021_02_08_430275	78	40	199	199	CD
10_1101-2021_02_08_430275	78	41	they	-PRON-	PRP
10_1101-2021_02_08_430275	78	42	became	become	VBD
10_1101-2021_02_08_430275	78	43	3.8	3.8	CD
10_1101-2021_02_08_430275	78	44	G	g	NN
10_1101-2021_02_08_430275	78	45	,	,	,
10_1101-2021_02_08_430275	78	46	3.6	3.6	CD
10_1101-2021_02_08_430275	78	47	G	g	NN
10_1101-2021_02_08_430275	78	48	,	,	,
10_1101-2021_02_08_430275	78	49	3.3	3.3	CD
10_1101-2021_02_08_430275	78	50	G	g	NN
10_1101-2021_02_08_430275	78	51	,	,	,
10_1101-2021_02_08_430275	78	52	and	and	CC
10_1101-2021_02_08_430275	78	53	3.4	3.4	CD
10_1101-2021_02_08_430275	78	54	G	g	NN
10_1101-2021_02_08_430275	78	55	after	after	IN
10_1101-2021_02_08_430275	78	56	quality	quality	NN
10_1101-2021_02_08_430275	78	57	con-	con-	NN
10_1101-2021_02_08_430275	78	58	200	200	CD
10_1101-2021_02_08_430275	78	59	trol	trol	NN
10_1101-2021_02_08_430275	78	60	,	,	,
10_1101-2021_02_08_430275	78	61	respectively	respectively	RB
10_1101-2021_02_08_430275	78	62	,	,	,
10_1101-2021_02_08_430275	78	63	in	in	IN
10_1101-2021_02_08_430275	78	64	ERR2696318	ERR2696318	NNP
10_1101-2021_02_08_430275	78	65	(	(	-LRB-
10_1101-2021_02_08_430275	78	66	parent	parent	NN
10_1101-2021_02_08_430275	78	67	LD24	LD24	NNP
10_1101-2021_02_08_430275	78	68	)	)	-RRB-
10_1101-2021_02_08_430275	78	69	,	,	,
10_1101-2021_02_08_430275	78	70	ERR2696319	ERR2696319	NNP
10_1101-2021_02_08_430275	78	71	201	201	CD
10_1101-2021_02_08_430275	78	72	(	(	-LRB-
10_1101-2021_02_08_430275	78	73	parent	parent	NN
10_1101-2021_02_08_430275	78	74	VialoneNano	VialoneNano	NNP
10_1101-2021_02_08_430275	78	75	)	)	-RRB-
10_1101-2021_02_08_430275	78	76	,	,	,
10_1101-2021_02_08_430275	78	77	ERR2696321	ERR2696321	NNP
10_1101-2021_02_08_430275	78	78	(	(	-LRB-
10_1101-2021_02_08_430275	78	79	the	the	DT
10_1101-2021_02_08_430275	78	80	resistant	resistant	JJ
10_1101-2021_02_08_430275	78	81	bulk	bulk	NN
10_1101-2021_02_08_430275	78	82	)	)	-RRB-
10_1101-2021_02_08_430275	78	83	,	,	,
10_1101-2021_02_08_430275	78	84	and	and	CC
10_1101-2021_02_08_430275	78	85	202	202	CD
10_1101-2021_02_08_430275	78	86	ERR2696322	ERR2696322	NNP
10_1101-2021_02_08_430275	78	87	(	(	-LRB-
10_1101-2021_02_08_430275	78	88	the	the	DT
10_1101-2021_02_08_430275	78	89	susceptible	susceptible	JJ
10_1101-2021_02_08_430275	78	90	bulk	bulk	NN
10_1101-2021_02_08_430275	78	91	)	)	-RRB-
10_1101-2021_02_08_430275	78	92	,	,	,
10_1101-2021_02_08_430275	78	93	which	which	WDT
10_1101-2021_02_08_430275	78	94	correspond	correspond	VBP
10_1101-2021_02_08_430275	78	95	to	to	IN
10_1101-2021_02_08_430275	78	96	8.8×	8.8×	CD
10_1101-2021_02_08_430275	78	97	,	,	,
10_1101-2021_02_08_430275	78	98	203	203	CD
10_1101-2021_02_08_430275	78	99	8.5×	8.5×	CD
10_1101-2021_02_08_430275	78	100	,	,	,
10_1101-2021_02_08_430275	78	101	7.6×	7.6×	CD
10_1101-2021_02_08_430275	78	102	,	,	,
10_1101-2021_02_08_430275	78	103	and	and	CC
10_1101-2021_02_08_430275	78	104	7.9×	7.9×	CD
10_1101-2021_02_08_430275	78	105	coverage	coverage	NN
10_1101-2021_02_08_430275	78	106	,	,	,
10_1101-2021_02_08_430275	78	107	respectively	respectively	RB
10_1101-2021_02_08_430275	78	108	(	(	-LRB-
10_1101-2021_02_08_430275	78	109	12	12	CD
10_1101-2021_02_08_430275	78	110	)	)	-RRB-
10_1101-2021_02_08_430275	78	111	.	.	.
10_1101-2021_02_08_430275	79	1	The	the	DT
10_1101-2021_02_08_430275	79	2	prepro-	prepro-	NN
10_1101-2021_02_08_430275	79	3	204	204	CD
10_1101-2021_02_08_430275	79	4	cessed	cessed	JJ
10_1101-2021_02_08_430275	79	5	sequences	sequence	NNS
10_1101-2021_02_08_430275	79	6	were	be	VBD
10_1101-2021_02_08_430275	79	7	used	use	VBN
10_1101-2021_02_08_430275	79	8	for	for	IN
10_1101-2021_02_08_430275	79	9	SNP	SNP	NNP
10_1101-2021_02_08_430275	79	10	calling	call	VBG
10_1101-2021_02_08_430275	79	11	to	to	TO
10_1101-2021_02_08_430275	79	12	generate	generate	VB
10_1101-2021_02_08_430275	79	13	a	a	DT
10_1101-2021_02_08_430275	79	14	SNP	SNP	NNP
10_1101-2021_02_08_430275	79	15	205	205	CD
10_1101-2021_02_08_430275	79	16	2	2	CD
10_1101-2021_02_08_430275	79	17	|	|	NNP
10_1101-2021_02_08_430275	79	18	https://doi.org/10.1101/654137	https://doi.org/10.1101/654137	NN
10_1101-2021_02_08_430275	79	19	Zhang	Zhang	NNP
10_1101-2021_02_08_430275	79	20	et	et	NNP
10_1101-2021_02_08_430275	79	21	al	al	NNP
10_1101-2021_02_08_430275	79	22	.	.	.
10_1101-2021_02_08_430275	80	1	.CC	.CC	NFP
10_1101-2021_02_08_430275	80	2	-	-	:
10_1101-2021_02_08_430275	80	3	BY	by	IN
10_1101-2021_02_08_430275	80	4	-	-	HYPH
10_1101-2021_02_08_430275	80	5	NC	NC	NNP
10_1101-2021_02_08_430275	80	6	-	-	HYPH
10_1101-2021_02_08_430275	80	7	ND	ND	NNP
10_1101-2021_02_08_430275	80	8	4.0	4.0	CD
10_1101-2021_02_08_430275	80	9	International	International	NNP
10_1101-2021_02_08_430275	80	10	licenseavailable	licenseavailable	NN
10_1101-2021_02_08_430275	80	11	under	under	IN
10_1101-2021_02_08_430275	80	12	a	a	DT
10_1101-2021_02_08_430275	80	13	(	(	-LRB-
10_1101-2021_02_08_430275	80	14	which	which	WDT
10_1101-2021_02_08_430275	80	15	was	be	VBD
10_1101-2021_02_08_430275	80	16	not	not	RB
10_1101-2021_02_08_430275	80	17	certified	certify	VBN
10_1101-2021_02_08_430275	80	18	by	by	IN
10_1101-2021_02_08_430275	80	19	peer	peer	NN
10_1101-2021_02_08_430275	80	20	review	review	NN
10_1101-2021_02_08_430275	80	21	)	)	-RRB-
10_1101-2021_02_08_430275	80	22	is	be	VBZ
10_1101-2021_02_08_430275	80	23	the	the	DT
10_1101-2021_02_08_430275	80	24	author	author	NN
10_1101-2021_02_08_430275	80	25	/	/	SYM
10_1101-2021_02_08_430275	80	26	funder	funder	NN
10_1101-2021_02_08_430275	80	27	,	,	,
10_1101-2021_02_08_430275	80	28	who	who	WP
10_1101-2021_02_08_430275	80	29	has	have	VBZ
10_1101-2021_02_08_430275	80	30	granted	grant	VBN
10_1101-2021_02_08_430275	80	31	bioRxiv	biorxiv	IN
10_1101-2021_02_08_430275	80	32	a	a	DT
10_1101-2021_02_08_430275	80	33	license	license	NN
10_1101-2021_02_08_430275	80	34	to	to	TO
10_1101-2021_02_08_430275	80	35	display	display	VB
10_1101-2021_02_08_430275	80	36	the	the	DT
10_1101-2021_02_08_430275	80	37	preprint	preprint	NN
10_1101-2021_02_08_430275	80	38	in	in	IN
10_1101-2021_02_08_430275	80	39	perpetuity	perpetuity	NN
10_1101-2021_02_08_430275	80	40	.	.	.
10_1101-2021_02_08_430275	81	1	It	-PRON-	PRP
10_1101-2021_02_08_430275	81	2	is	be	VBZ
10_1101-2021_02_08_430275	81	3	made	make	VBN
10_1101-2021_02_08_430275	81	4	The	the	DT
10_1101-2021_02_08_430275	81	5	copyright	copyright	NN
10_1101-2021_02_08_430275	81	6	holder	holder	NN
10_1101-2021_02_08_430275	81	7	for	for	IN
10_1101-2021_02_08_430275	81	8	this	this	DT
10_1101-2021_02_08_430275	81	9	preprintthis	preprintthis	NN
10_1101-2021_02_08_430275	81	10	version	version	NN
10_1101-2021_02_08_430275	81	11	posted	post	VBD
10_1101-2021_02_08_430275	81	12	February	February	NNP
10_1101-2021_02_08_430275	81	13	10	10	CD
10_1101-2021_02_08_430275	81	14	,	,	,
10_1101-2021_02_08_430275	81	15	2021	2021	CD
10_1101-2021_02_08_430275	81	16	.	.	.
10_1101-2021_02_08_430275	81	17	;	;	:
10_1101-2021_02_08_430275	81	18	https://doi.org/10.1101/2021.02.08.430275doi	https://doi.org/10.1101/2021.02.08.430275doi	ADD
10_1101-2021_02_08_430275	81	19	:	:	:
10_1101-2021_02_08_430275	81	20	bioRxiv	biorxiv	VB
10_1101-2021_02_08_430275	81	21	preprint	preprint	JJ
10_1101-2021_02_08_430275	81	22	https://plants.ensembl.org/Oryza_sativa/Info/Index	https://plants.ensembl.org/oryza_sativa/info/index	JJ
10_1101-2021_02_08_430275	81	23	https://plants.ensembl.org/Oryza_sativa/Info/Index	https://plants.ensembl.org/Oryza_sativa/Info/Index	NNP
10_1101-2021_02_08_430275	81	24	https://plants.ensembl.org/Oryza_sativa/Info/Index	https://plants.ensembl.org/Oryza_sativa/Info/Index	NNP
10_1101-2021_02_08_430275	81	25	https://github.com/dblhlx/PyBSASeq	https://github.com/dblhlx/PyBSASeq	NNP
10_1101-2021_02_08_430275	81	26	https://doi.org/10.1101/654137	https://doi.org/10.1101/654137	NNP
10_1101-2021_02_08_430275	81	27	https://doi.org/10.1101/2021.02.08.430275	https://doi.org/10.1101/2021.02.08.430275	NNP
10_1101-2021_02_08_430275	81	28	http://creativecommons.org/licenses/by-nc-nd/4.0/	http://creativecommons.org/licenses/by-nc-nd/4.0/	NNP
10_1101-2021_02_08_430275	81	29	DR	DR	NNP
10_1101-2021_02_08_430275	81	30	AF	AF	NNP
10_1101-2021_02_08_430275	81	31	T	T	NNP
10_1101-2021_02_08_430275	81	32	dataset	dataset	NN
10_1101-2021_02_08_430275	81	33	,	,	,
10_1101-2021_02_08_430275	81	34	which	which	WDT
10_1101-2021_02_08_430275	81	35	was	be	VBD
10_1101-2021_02_08_430275	81	36	analyzed	analyze	VBN
10_1101-2021_02_08_430275	81	37	using	use	VBG
10_1101-2021_02_08_430275	81	38	the	the	DT
10_1101-2021_02_08_430275	81	39	modified	modify	VBN
10_1101-2021_02_08_430275	81	40	significant206	significant206	NNP
10_1101-2021_02_08_430275	81	41	structural	structural	JJ
10_1101-2021_02_08_430275	81	42	variant	variant	JJ
10_1101-2021_02_08_430275	81	43	method	method	NN
10_1101-2021_02_08_430275	81	44	,	,	,
10_1101-2021_02_08_430275	81	45	the	the	DT
10_1101-2021_02_08_430275	81	46	G	g	NN
10_1101-2021_02_08_430275	81	47	-	-	HYPH
10_1101-2021_02_08_430275	81	48	statistic	statistic	NN
10_1101-2021_02_08_430275	81	49	method	method	NN
10_1101-2021_02_08_430275	81	50	,	,	,
10_1101-2021_02_08_430275	81	51	and	and	CC
10_1101-2021_02_08_430275	81	52	the207	the207	CD
10_1101-2021_02_08_430275	81	53	allele	allele	NNP
10_1101-2021_02_08_430275	81	54	frequency	frequency	NN
10_1101-2021_02_08_430275	81	55	method	method	NN
10_1101-2021_02_08_430275	81	56	with	with	IN
10_1101-2021_02_08_430275	81	57	or	or	CC
10_1101-2021_02_08_430275	81	58	without	without	IN
10_1101-2021_02_08_430275	81	59	the	the	DT
10_1101-2021_02_08_430275	81	60	aid	aid	NN
10_1101-2021_02_08_430275	81	61	of	of	IN
10_1101-2021_02_08_430275	81	62	the	the	DT
10_1101-2021_02_08_430275	81	63	parental208	parental208	NNP
10_1101-2021_02_08_430275	81	64	genome	genome	NNP
10_1101-2021_02_08_430275	81	65	sequences.209	sequences.209	IN
10_1101-2021_02_08_430275	81	66	BSA	BSA	NNP
10_1101-2021_02_08_430275	81	67	-	-	HYPH
10_1101-2021_02_08_430275	81	68	Seq	seq	NN
10_1101-2021_02_08_430275	81	69	data	data	NN
10_1101-2021_02_08_430275	81	70	analysis	analysis	NN
10_1101-2021_02_08_430275	81	71	using	use	VBG
10_1101-2021_02_08_430275	81	72	the	the	DT
10_1101-2021_02_08_430275	81	73	genome	genome	NNP
10_1101-2021_02_08_430275	81	74	sequences	sequence	NNS
10_1101-2021_02_08_430275	81	75	of210	of210	NN
10_1101-2021_02_08_430275	81	76	both	both	CC
10_1101-2021_02_08_430275	81	77	the	the	DT
10_1101-2021_02_08_430275	81	78	parents	parent	NNS
10_1101-2021_02_08_430275	81	79	and	and	CC
10_1101-2021_02_08_430275	81	80	the	the	DT
10_1101-2021_02_08_430275	81	81	bulks	bulk	NNS
10_1101-2021_02_08_430275	81	82	.	.	.
10_1101-2021_02_08_430275	82	1	The	the	DT
10_1101-2021_02_08_430275	82	2	SNP	SNP	NNP
10_1101-2021_02_08_430275	82	3	calling	call	VBG
10_1101-2021_02_08_430275	82	4	-	-	HYPH
10_1101-2021_02_08_430275	82	5	generated211	generated211	NNP
10_1101-2021_02_08_430275	82	6	parent	parent	NN
10_1101-2021_02_08_430275	82	7	/	/	SYM
10_1101-2021_02_08_430275	82	8	bulk	bulk	NNP
10_1101-2021_02_08_430275	82	9	SNP	SNP	NNP
10_1101-2021_02_08_430275	82	10	dataset	dataset	NN
10_1101-2021_02_08_430275	82	11	was	be	VBD
10_1101-2021_02_08_430275	82	12	processed	process	VBN
10_1101-2021_02_08_430275	82	13	with	with	IN
10_1101-2021_02_08_430275	82	14	the	the	DT
10_1101-2021_02_08_430275	82	15	Python212	Python212	NNP
10_1101-2021_02_08_430275	82	16	script	script	NN
10_1101-2021_02_08_430275	82	17	PyBSASeq_WP.py	pybsaseq_wp.py	NN
10_1101-2021_02_08_430275	82	18	.	.	.
10_1101-2021_02_08_430275	83	1	SNP	SNP	NNP
10_1101-2021_02_08_430275	83	2	filtering	filtering	NN
10_1101-2021_02_08_430275	83	3	was	be	VBD
10_1101-2021_02_08_430275	83	4	performed	perform	VBN
10_1101-2021_02_08_430275	83	5	as213	as213	NN
10_1101-2021_02_08_430275	83	6	described	describe	VBN
10_1101-2021_02_08_430275	83	7	in	in	IN
10_1101-2021_02_08_430275	83	8	the	the	DT
10_1101-2021_02_08_430275	83	9	Materials	Materials	NNPS
10_1101-2021_02_08_430275	83	10	and	and	CC
10_1101-2021_02_08_430275	83	11	Methods	Methods	NNPS
10_1101-2021_02_08_430275	83	12	section	section	NN
10_1101-2021_02_08_430275	83	13	.	.	.
10_1101-2021_02_08_430275	84	1	The	the	DT
10_1101-2021_02_08_430275	84	2	parental214	parental214	NNP
10_1101-2021_02_08_430275	84	3	SNP	SNP	NNP
10_1101-2021_02_08_430275	84	4	dataset	dataset	NN
10_1101-2021_02_08_430275	84	5	was	be	VBD
10_1101-2021_02_08_430275	84	6	processed	process	VBN
10_1101-2021_02_08_430275	84	7	first	first	RB
10_1101-2021_02_08_430275	84	8	,	,	,
10_1101-2021_02_08_430275	84	9	and	and	CC
10_1101-2021_02_08_430275	84	10	the	the	DT
10_1101-2021_02_08_430275	84	11	SNPs	SNPs	NNPS
10_1101-2021_02_08_430275	84	12	heterozygous215	heterozygous215	NNP
10_1101-2021_02_08_430275	84	13	in	in	IN
10_1101-2021_02_08_430275	84	14	any	any	DT
10_1101-2021_02_08_430275	84	15	parent	parent	NN
10_1101-2021_02_08_430275	84	16	were	be	VBD
10_1101-2021_02_08_430275	84	17	eliminated	eliminate	VBN
10_1101-2021_02_08_430275	84	18	because	because	IN
10_1101-2021_02_08_430275	84	19	all	all	DT
10_1101-2021_02_08_430275	84	20	algorithms	algorithm	NNS
10_1101-2021_02_08_430275	84	21	assume216	assume216	NNP
10_1101-2021_02_08_430275	84	22	all	all	DT
10_1101-2021_02_08_430275	84	23	SNP	SNP	NNP
10_1101-2021_02_08_430275	84	24	loci	loci	NN
10_1101-2021_02_08_430275	84	25	are	be	VBP
10_1101-2021_02_08_430275	84	26	homozygous	homozygous	JJ
10_1101-2021_02_08_430275	84	27	in	in	IN
10_1101-2021_02_08_430275	84	28	the	the	DT
10_1101-2021_02_08_430275	84	29	parental	parental	JJ
10_1101-2021_02_08_430275	84	30	lines	line	NNS
10_1101-2021_02_08_430275	84	31	.	.	.
10_1101-2021_02_08_430275	85	1	Threshold217	threshold217	NN
10_1101-2021_02_08_430275	85	2	estimation	estimation	NN
10_1101-2021_02_08_430275	85	3	is	be	VBZ
10_1101-2021_02_08_430275	85	4	based	base	VBN
10_1101-2021_02_08_430275	85	5	on	on	IN
10_1101-2021_02_08_430275	85	6	this	this	DT
10_1101-2021_02_08_430275	85	7	assumption	assumption	NN
10_1101-2021_02_08_430275	85	8	.	.	.
10_1101-2021_02_08_430275	86	1	Although	although	IN
10_1101-2021_02_08_430275	86	2	most	most	JJS
10_1101-2021_02_08_430275	86	3	rice218	rice218	NNP
10_1101-2021_02_08_430275	86	4	breeding	breeding	NN
10_1101-2021_02_08_430275	86	5	lines	line	NNS
10_1101-2021_02_08_430275	86	6	should	should	MD
10_1101-2021_02_08_430275	86	7	be	be	VB
10_1101-2021_02_08_430275	86	8	homozygous	homozygous	JJ
10_1101-2021_02_08_430275	86	9	in	in	IN
10_1101-2021_02_08_430275	86	10	most	most	JJS
10_1101-2021_02_08_430275	86	11	loci	loci	NN
10_1101-2021_02_08_430275	86	12	,	,	,
10_1101-2021_02_08_430275	86	13	more219	more219	NNP
10_1101-2021_02_08_430275	86	14	than	than	IN
10_1101-2021_02_08_430275	86	15	7	7	CD
10_1101-2021_02_08_430275	86	16	%	%	NN
10_1101-2021_02_08_430275	86	17	heterozygous	heterozygous	JJ
10_1101-2021_02_08_430275	86	18	SNP	SNP	NNP
10_1101-2021_02_08_430275	86	19	loci	loci	NN
10_1101-2021_02_08_430275	86	20	(	(	-LRB-
10_1101-2021_02_08_430275	86	21	2	2	CD
10_1101-2021_02_08_430275	86	22	011	011	CD
10_1101-2021_02_08_430275	86	23	062	062	CD
10_1101-2021_02_08_430275	86	24	homozygous	homozygous	JJ
10_1101-2021_02_08_430275	86	25	and220	and220	NNP
10_1101-2021_02_08_430275	86	26	153	153	CD
10_1101-2021_02_08_430275	86	27	000	000	CD
10_1101-2021_02_08_430275	86	28	heterozygous	heterozygous	JJ
10_1101-2021_02_08_430275	86	29	)	)	-RRB-
10_1101-2021_02_08_430275	86	30	were	be	VBD
10_1101-2021_02_08_430275	86	31	identified	identify	VBN
10_1101-2021_02_08_430275	86	32	in	in	IN
10_1101-2021_02_08_430275	86	33	the	the	DT
10_1101-2021_02_08_430275	86	34	parental	parental	JJ
10_1101-2021_02_08_430275	86	35	SNP221	SNP221	NNP
10_1101-2021_02_08_430275	86	36	dataset	dataset	NN
10_1101-2021_02_08_430275	86	37	.	.	.
10_1101-2021_02_08_430275	87	1	However	however	RB
10_1101-2021_02_08_430275	87	2	,	,	,
10_1101-2021_02_08_430275	87	3	the	the	DT
10_1101-2021_02_08_430275	87	4	GATK	GATK	NNP
10_1101-2021_02_08_430275	87	5	’s	’s	POS
10_1101-2021_02_08_430275	87	6	variant	variant	JJ
10_1101-2021_02_08_430275	87	7	calling	calling	NN
10_1101-2021_02_08_430275	87	8	tools	tool	NNS
10_1101-2021_02_08_430275	87	9	are222	are222	CD
10_1101-2021_02_08_430275	87	10	designed	design	VBN
10_1101-2021_02_08_430275	87	11	to	to	TO
10_1101-2021_02_08_430275	87	12	be	be	VB
10_1101-2021_02_08_430275	87	13	very	very	RB
10_1101-2021_02_08_430275	87	14	lenient	lenient	JJ
10_1101-2021_02_08_430275	87	15	in	in	IN
10_1101-2021_02_08_430275	87	16	order	order	NN
10_1101-2021_02_08_430275	87	17	to	to	TO
10_1101-2021_02_08_430275	87	18	achieve	achieve	VB
10_1101-2021_02_08_430275	87	19	a	a	DT
10_1101-2021_02_08_430275	87	20	high	high	JJ
10_1101-2021_02_08_430275	87	21	degree223	degree223	NN
10_1101-2021_02_08_430275	87	22	of	of	IN
10_1101-2021_02_08_430275	87	23	sensitivity	sensitivity	NN
10_1101-2021_02_08_430275	87	24	(	(	-LRB-
10_1101-2021_02_08_430275	87	25	https://gatk.broadinstitute.org/hc/en-us/articles/224	https://gatk.broadinstitute.org/hc/en-us/articles/224	CD
10_1101-2021_02_08_430275	87	26	360035535932-Germline	360035535932-germline	CD
10_1101-2021_02_08_430275	87	27	-	-	HYPH
10_1101-2021_02_08_430275	87	28	short	short	JJ
10_1101-2021_02_08_430275	87	29	-	-	HYPH
10_1101-2021_02_08_430275	87	30	variant	variant	JJ
10_1101-2021_02_08_430275	87	31	-	-	HYPH
10_1101-2021_02_08_430275	87	32	discovery	discovery	NN
10_1101-2021_02_08_430275	87	33	-	-	HYPH
10_1101-2021_02_08_430275	87	34	SNPs	snps	NN
10_1101-2021_02_08_430275	87	35	-	-	HYPH
10_1101-2021_02_08_430275	87	36	Indels-),225	indels-),225	NN
10_1101-2021_02_08_430275	87	37	we	-PRON-	PRP
10_1101-2021_02_08_430275	87	38	can	can	MD
10_1101-2021_02_08_430275	87	39	not	not	RB
10_1101-2021_02_08_430275	87	40	rule	rule	VB
10_1101-2021_02_08_430275	87	41	out	out	RP
10_1101-2021_02_08_430275	87	42	the	the	DT
10_1101-2021_02_08_430275	87	43	possibility	possibility	NN
10_1101-2021_02_08_430275	87	44	that	that	IN
10_1101-2021_02_08_430275	87	45	some	some	DT
10_1101-2021_02_08_430275	87	46	of	of	IN
10_1101-2021_02_08_430275	87	47	the	the	DT
10_1101-2021_02_08_430275	87	48	heterozy-226	heterozy-226	NNP
10_1101-2021_02_08_430275	87	49	gous	gous	JJ
10_1101-2021_02_08_430275	87	50	loci	loci	NN
10_1101-2021_02_08_430275	87	51	were	be	VBD
10_1101-2021_02_08_430275	87	52	caused	cause	VBN
10_1101-2021_02_08_430275	87	53	by	by	IN
10_1101-2021_02_08_430275	87	54	sequencing	sequence	VBG
10_1101-2021_02_08_430275	87	55	artifacts	artifact	NNS
10_1101-2021_02_08_430275	87	56	.	.	.
10_1101-2021_02_08_430275	88	1	The	the	DT
10_1101-2021_02_08_430275	88	2	bulk	bulk	JJ
10_1101-2021_02_08_430275	88	3	SNP227	SNP227	NNP
10_1101-2021_02_08_430275	88	4	dataset	dataset	NN
10_1101-2021_02_08_430275	88	5	was	be	VBD
10_1101-2021_02_08_430275	88	6	processed	process	VBN
10_1101-2021_02_08_430275	88	7	second	second	JJ
10_1101-2021_02_08_430275	88	8	.	.	.
10_1101-2021_02_08_430275	89	1	The	the	DT
10_1101-2021_02_08_430275	89	2	SNPs	snp	NNS
10_1101-2021_02_08_430275	89	3	with	with	IN
10_1101-2021_02_08_430275	89	4	the	the	DT
10_1101-2021_02_08_430275	89	5	same228	same228	JJ
10_1101-2021_02_08_430275	89	6	chromosome	chromosome	NN
10_1101-2021_02_08_430275	89	7	ID	ID	NNP
10_1101-2021_02_08_430275	89	8	and	and	CC
10_1101-2021_02_08_430275	89	9	the	the	DT
10_1101-2021_02_08_430275	89	10	same	same	JJ
10_1101-2021_02_08_430275	89	11	genomic	genomic	JJ
10_1101-2021_02_08_430275	89	12	coordinate	coordinate	NN
10_1101-2021_02_08_430275	89	13	in	in	IN
10_1101-2021_02_08_430275	89	14	both229	both229	NNP
10_1101-2021_02_08_430275	89	15	datasets	dataset	NNS
10_1101-2021_02_08_430275	89	16	were	be	VBD
10_1101-2021_02_08_430275	89	17	considered	consider	VBN
10_1101-2021_02_08_430275	89	18	common	common	JJ
10_1101-2021_02_08_430275	89	19	SNPs	snp	NNS
10_1101-2021_02_08_430275	89	20	.	.	.
10_1101-2021_02_08_430275	90	1	Common	common	JJ
10_1101-2021_02_08_430275	90	2	SNPs	snp	NNS
10_1101-2021_02_08_430275	90	3	in230	in230	VBP
10_1101-2021_02_08_430275	90	4	the	the	DT
10_1101-2021_02_08_430275	90	5	bulk	bulk	JJ
10_1101-2021_02_08_430275	90	6	dataset	dataset	NN
10_1101-2021_02_08_430275	90	7	were	be	VBD
10_1101-2021_02_08_430275	90	8	used	use	VBN
10_1101-2021_02_08_430275	90	9	to	to	TO
10_1101-2021_02_08_430275	90	10	detect	detect	VB
10_1101-2021_02_08_430275	90	11	SNP	SNP	NNP
10_1101-2021_02_08_430275	90	12	-	-	HYPH
10_1101-2021_02_08_430275	90	13	trait	trait	NN
10_1101-2021_02_08_430275	90	14	associations231	associations231	NNP
10_1101-2021_02_08_430275	90	15	for	for	IN
10_1101-2021_02_08_430275	90	16	all	all	DT
10_1101-2021_02_08_430275	90	17	three	three	CD
10_1101-2021_02_08_430275	90	18	methods.232	methods.232	NNP
10_1101-2021_02_08_430275	90	19	Table	table	NN
10_1101-2021_02_08_430275	90	20	1	1	CD
10_1101-2021_02_08_430275	90	21	.	.	.
10_1101-2021_02_08_430275	91	1	Chromosomal	chromosomal	JJ
10_1101-2021_02_08_430275	91	2	distribution	distribution	NN
10_1101-2021_02_08_430275	91	3	of	of	IN
10_1101-2021_02_08_430275	91	4	SNPs	snp	NNS
10_1101-2021_02_08_430275	91	5	-	-	,
10_1101-2021_02_08_430275	91	6	using	use	VBG
10_1101-2021_02_08_430275	91	7	the	the	DT
10_1101-2021_02_08_430275	91	8	genome	genome	JJ
10_1101-2021_02_08_430275	91	9	sequences	sequence	NNS
10_1101-2021_02_08_430275	91	10	of	of	IN
10_1101-2021_02_08_430275	91	11	both	both	PDT
10_1101-2021_02_08_430275	91	12	the	the	DT
10_1101-2021_02_08_430275	91	13	parents	parent	NNS
10_1101-2021_02_08_430275	91	14	and	and	CC
10_1101-2021_02_08_430275	91	15	the	the	DT
10_1101-2021_02_08_430275	91	16	bulks	bulk	NNS
10_1101-2021_02_08_430275	91	17	Chromosome	Chromosome	NNP
10_1101-2021_02_08_430275	91	18	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	91	19	TotalSNPs	totalsnps	RB
10_1101-2021_02_08_430275	91	20	sSNP	ssnp	NN
10_1101-2021_02_08_430275	91	21	/	/	SYM
10_1101-2021_02_08_430275	91	22	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	91	23	1	1	CD
10_1101-2021_02_08_430275	91	24	1170	1170	CD
10_1101-2021_02_08_430275	91	25	139	139	CD
10_1101-2021_02_08_430275	91	26	910	910	CD
10_1101-2021_02_08_430275	91	27	0.0084	0.0084	CD
10_1101-2021_02_08_430275	91	28	2	2	CD
10_1101-2021_02_08_430275	91	29	310	310	CD
10_1101-2021_02_08_430275	91	30	125	125	CD
10_1101-2021_02_08_430275	91	31	129	129	CD
10_1101-2021_02_08_430275	91	32	0.0025	0.0025	CD
10_1101-2021_02_08_430275	91	33	3	3	CD
10_1101-2021_02_08_430275	91	34	459	459	CD
10_1101-2021_02_08_430275	91	35	102	102	CD
10_1101-2021_02_08_430275	91	36	331	331	CD
10_1101-2021_02_08_430275	91	37	0.0045	0.0045	CD
10_1101-2021_02_08_430275	91	38	4	4	CD
10_1101-2021_02_08_430275	91	39	330	330	CD
10_1101-2021_02_08_430275	91	40	89	89	CD
10_1101-2021_02_08_430275	91	41	577	577	CD
10_1101-2021_02_08_430275	91	42	0.0037	0.0037	CD
10_1101-2021_02_08_430275	91	43	5	5	CD
10_1101-2021_02_08_430275	91	44	372	372	CD
10_1101-2021_02_08_430275	91	45	84	84	CD
10_1101-2021_02_08_430275	91	46	706	706	CD
10_1101-2021_02_08_430275	91	47	0.0044	0.0044	CD
10_1101-2021_02_08_430275	91	48	6	6	CD
10_1101-2021_02_08_430275	91	49	1581	1581	CD
10_1101-2021_02_08_430275	91	50	83	83	CD
10_1101-2021_02_08_430275	91	51	605	605	CD
10_1101-2021_02_08_430275	91	52	0.0189	0.0189	CD
10_1101-2021_02_08_430275	91	53	7	7	CD
10_1101-2021_02_08_430275	91	54	378	378	CD
10_1101-2021_02_08_430275	91	55	94	94	CD
10_1101-2021_02_08_430275	91	56	371	371	CD
10_1101-2021_02_08_430275	91	57	0.0040	0.0040	CD
10_1101-2021_02_08_430275	91	58	8	8	CD
10_1101-2021_02_08_430275	91	59	258	258	CD
10_1101-2021_02_08_430275	91	60	80	80	CD
10_1101-2021_02_08_430275	91	61	617	617	CD
10_1101-2021_02_08_430275	91	62	0.0032	0.0032	CD
10_1101-2021_02_08_430275	91	63	9	9	CD
10_1101-2021_02_08_430275	91	64	1292	1292	CD
10_1101-2021_02_08_430275	91	65	67	67	CD
10_1101-2021_02_08_430275	91	66	157	157	CD
10_1101-2021_02_08_430275	91	67	0.0192	0.0192	CD
10_1101-2021_02_08_430275	91	68	10	10	CD
10_1101-2021_02_08_430275	91	69	363	363	CD
10_1101-2021_02_08_430275	91	70	56	56	CD
10_1101-2021_02_08_430275	91	71	681	681	CD
10_1101-2021_02_08_430275	91	72	0.0064	0.0064	CD
10_1101-2021_02_08_430275	91	73	11	11	CD
10_1101-2021_02_08_430275	91	74	2765	2765	CD
10_1101-2021_02_08_430275	91	75	88	88	CD
10_1101-2021_02_08_430275	91	76	287	287	CD
10_1101-2021_02_08_430275	91	77	0.0313	0.0313	CD
10_1101-2021_02_08_430275	91	78	12	12	CD
10_1101-2021_02_08_430275	91	79	241	241	CD
10_1101-2021_02_08_430275	91	80	87	87	CD
10_1101-2021_02_08_430275	91	81	145	145	CD
10_1101-2021_02_08_430275	91	82	0.0028	0.0028	CD
10_1101-2021_02_08_430275	91	83	Genome	genome	NN
10_1101-2021_02_08_430275	91	84	-	-	HYPH
10_1101-2021_02_08_430275	91	85	wide	wide	JJ
10_1101-2021_02_08_430275	91	86	9519	9519	CD
10_1101-2021_02_08_430275	91	87	1	1	CD
10_1101-2021_02_08_430275	91	88	099	099	CD
10_1101-2021_02_08_430275	91	89	516	516	CD
10_1101-2021_02_08_430275	91	90	0.0087	0.0087	CD
10_1101-2021_02_08_430275	91	91	The	the	DT
10_1101-2021_02_08_430275	91	92	significant	significant	JJ
10_1101-2021_02_08_430275	91	93	structural	structural	JJ
10_1101-2021_02_08_430275	91	94	variant	variant	JJ
10_1101-2021_02_08_430275	91	95	method	method	NN
10_1101-2021_02_08_430275	91	96	:	:	:
10_1101-2021_02_08_430275	91	97	Each	each	DT
10_1101-2021_02_08_430275	91	98	SNP	SNP	NNP
10_1101-2021_02_08_430275	91	99	in	in	IN
10_1101-2021_02_08_430275	91	100	the233	the233	DT
10_1101-2021_02_08_430275	91	101	dataset	dataset	NN
10_1101-2021_02_08_430275	91	102	was	be	VBD
10_1101-2021_02_08_430275	91	103	tested	test	VBN
10_1101-2021_02_08_430275	91	104	via	via	IN
10_1101-2021_02_08_430275	91	105	Fisher	Fisher	NNP
10_1101-2021_02_08_430275	91	106	’s	’s	POS
10_1101-2021_02_08_430275	91	107	exact	exact	JJ
10_1101-2021_02_08_430275	91	108	test	test	NN
10_1101-2021_02_08_430275	91	109	using	use	VBG
10_1101-2021_02_08_430275	91	110	its	-PRON-	PRP$
10_1101-2021_02_08_430275	91	111	four	four	CD
10_1101-2021_02_08_430275	91	112	AD234	AD234	NNP
10_1101-2021_02_08_430275	91	113	values	value	NNS
10_1101-2021_02_08_430275	91	114	,	,	,
10_1101-2021_02_08_430275	91	115	and	and	CC
10_1101-2021_02_08_430275	91	116	SNPs	SNPs	NNPS
10_1101-2021_02_08_430275	91	117	with	with	IN
10_1101-2021_02_08_430275	91	118	P	p	NN
10_1101-2021_02_08_430275	91	119	-	-	HYPH
10_1101-2021_02_08_430275	91	120	values	value	NNS
10_1101-2021_02_08_430275	91	121	less	less	JJR
10_1101-2021_02_08_430275	91	122	than	than	IN
10_1101-2021_02_08_430275	91	123	0.01	0.01	CD
10_1101-2021_02_08_430275	91	124	were	be	VBD
10_1101-2021_02_08_430275	91	125	defined235	defined235	NNP
10_1101-2021_02_08_430275	91	126	as	as	IN
10_1101-2021_02_08_430275	91	127	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	91	128	.	.	.
10_1101-2021_02_08_430275	92	1	The	the	DT
10_1101-2021_02_08_430275	92	2	chromosomal	chromosomal	JJ
10_1101-2021_02_08_430275	92	3	distributions	distribution	NNS
10_1101-2021_02_08_430275	92	4	of	of	IN
10_1101-2021_02_08_430275	92	5	the	the	DT
10_1101-2021_02_08_430275	92	6	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	92	7	and236	and236	SYM
10_1101-2021_02_08_430275	92	8	the	the	DT
10_1101-2021_02_08_430275	92	9	total	total	JJ
10_1101-2021_02_08_430275	92	10	SNPs	snp	NNS
10_1101-2021_02_08_430275	92	11	are	be	VBP
10_1101-2021_02_08_430275	92	12	summarized	summarize	VBN
10_1101-2021_02_08_430275	92	13	in	in	IN
10_1101-2021_02_08_430275	92	14	Table	table	NN
10_1101-2021_02_08_430275	92	15	1	1	CD
10_1101-2021_02_08_430275	92	16	.	.	.
10_1101-2021_02_08_430275	93	1	Using	use	VBG
10_1101-2021_02_08_430275	93	2	the	the	DT
10_1101-2021_02_08_430275	93	3	sliding237	sliding237	NNP
10_1101-2021_02_08_430275	93	4	window	window	NN
10_1101-2021_02_08_430275	93	5	algorithm	algorithm	NN
10_1101-2021_02_08_430275	93	6	,	,	,
10_1101-2021_02_08_430275	93	7	the	the	DT
10_1101-2021_02_08_430275	93	8	genomic	genomic	JJ
10_1101-2021_02_08_430275	93	9	distribution	distribution	NN
10_1101-2021_02_08_430275	93	10	of	of	IN
10_1101-2021_02_08_430275	93	11	the	the	DT
10_1101-2021_02_08_430275	93	12	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	93	13	,	,	,
10_1101-2021_02_08_430275	93	14	the238	the238	DT
10_1101-2021_02_08_430275	93	15	total	total	JJ
10_1101-2021_02_08_430275	93	16	SNPs	snp	NNS
10_1101-2021_02_08_430275	93	17	,	,	,
10_1101-2021_02_08_430275	93	18	and	and	CC
10_1101-2021_02_08_430275	93	19	the	the	DT
10_1101-2021_02_08_430275	93	20	sSNP	ssnp	NN
10_1101-2021_02_08_430275	93	21	/	/	SYM
10_1101-2021_02_08_430275	93	22	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	93	23	ratios	ratio	NNS
10_1101-2021_02_08_430275	93	24	of	of	IN
10_1101-2021_02_08_430275	93	25	sliding	slide	VBG
10_1101-2021_02_08_430275	93	26	windows239	windows239	NNP
10_1101-2021_02_08_430275	93	27	were	be	VBD
10_1101-2021_02_08_430275	93	28	plotted	plot	VBN
10_1101-2021_02_08_430275	93	29	against	against	IN
10_1101-2021_02_08_430275	93	30	their	-PRON-	PRP$
10_1101-2021_02_08_430275	93	31	genomic	genomic	JJ
10_1101-2021_02_08_430275	93	32	position	position	NN
10_1101-2021_02_08_430275	93	33	(	(	-LRB-
10_1101-2021_02_08_430275	93	34	Figure	figure	NN
10_1101-2021_02_08_430275	93	35	1a	1a	NNP
10_1101-2021_02_08_430275	93	36	and240	and240	NNP
10_1101-2021_02_08_430275	93	37	Figure	Figure	NNP
10_1101-2021_02_08_430275	93	38	1b	1b	NN
10_1101-2021_02_08_430275	93	39	)	)	-RRB-
10_1101-2021_02_08_430275	93	40	.	.	.
10_1101-2021_02_08_430275	94	1	A	a	DT
10_1101-2021_02_08_430275	94	2	genome	genome	JJ
10_1101-2021_02_08_430275	94	3	-	-	HYPH
10_1101-2021_02_08_430275	94	4	wide	wide	JJ
10_1101-2021_02_08_430275	94	5	threshold	threshold	NN
10_1101-2021_02_08_430275	94	6	was	be	VBD
10_1101-2021_02_08_430275	94	7	estimated	estimate	VBN
10_1101-2021_02_08_430275	94	8	as	as	IN
10_1101-2021_02_08_430275	94	9	0.0538241	0.0538241	CD
10_1101-2021_02_08_430275	94	10	via	via	IN
10_1101-2021_02_08_430275	94	11	simulation	simulation	NN
10_1101-2021_02_08_430275	94	12	as	as	IN
10_1101-2021_02_08_430275	94	13	described	describe	VBN
10_1101-2021_02_08_430275	94	14	previously	previously	RB
10_1101-2021_02_08_430275	94	15	(	(	-LRB-
10_1101-2021_02_08_430275	94	16	8)	8)	CD
10_1101-2021_02_08_430275	94	17	.	.	.
10_1101-2021_02_08_430275	95	1	Two	two	CD
10_1101-2021_02_08_430275	95	2	peaks	peak	VBZ
10_1101-2021_02_08_430275	95	3	above242	above242	PRP
10_1101-2021_02_08_430275	95	4	the	the	DT
10_1101-2021_02_08_430275	95	5	threshold	threshold	NN
10_1101-2021_02_08_430275	95	6	were	be	VBD
10_1101-2021_02_08_430275	95	7	identified	identify	VBN
10_1101-2021_02_08_430275	95	8	:	:	:
10_1101-2021_02_08_430275	95	9	a	a	DT
10_1101-2021_02_08_430275	95	10	minor	minor	JJ
10_1101-2021_02_08_430275	95	11	one	one	NN
10_1101-2021_02_08_430275	95	12	on	on	IN
10_1101-2021_02_08_430275	95	13	chromosome243	chromosome243	NNP
10_1101-2021_02_08_430275	95	14	9	9	CD
10_1101-2021_02_08_430275	95	15	and	and	CC
10_1101-2021_02_08_430275	95	16	a	a	DT
10_1101-2021_02_08_430275	95	17	major	major	JJ
10_1101-2021_02_08_430275	95	18	one	one	CD
10_1101-2021_02_08_430275	95	19	on	on	IN
10_1101-2021_02_08_430275	95	20	chromosome	chromosome	NN
10_1101-2021_02_08_430275	95	21	11	11	CD
10_1101-2021_02_08_430275	95	22	.	.	.
10_1101-2021_02_08_430275	96	1	The	the	DT
10_1101-2021_02_08_430275	96	2	position	position	NN
10_1101-2021_02_08_430275	96	3	of	of	IN
10_1101-2021_02_08_430275	96	4	the244	the244	NNP
10_1101-2021_02_08_430275	96	5	peak	peak	NN
10_1101-2021_02_08_430275	96	6	on	on	IN
10_1101-2021_02_08_430275	96	7	chromosome	chromosome	NN
10_1101-2021_02_08_430275	96	8	9	9	CD
10_1101-2021_02_08_430275	96	9	was	be	VBD
10_1101-2021_02_08_430275	96	10	at	at	IN
10_1101-2021_02_08_430275	96	11	1.11	1.11	CD
10_1101-2021_02_08_430275	96	12	Mb	Mb	NNS
10_1101-2021_02_08_430275	96	13	,	,	,
10_1101-2021_02_08_430275	96	14	the	the	DT
10_1101-2021_02_08_430275	96	15	sliding	slide	VBG
10_1101-2021_02_08_430275	96	16	window245	window245	NNP
10_1101-2021_02_08_430275	96	17	contained	contain	VBD
10_1101-2021_02_08_430275	96	18	230	230	CD
10_1101-2021_02_08_430275	96	19	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	96	20	and	and	CC
10_1101-2021_02_08_430275	96	21	3738	3738	CD
10_1101-2021_02_08_430275	96	22	total	total	JJ
10_1101-2021_02_08_430275	96	23	SNPs	snp	NNS
10_1101-2021_02_08_430275	96	24	,	,	,
10_1101-2021_02_08_430275	96	25	corresponding246	corresponding246	VBD
10_1101-2021_02_08_430275	96	26	to	to	IN
10_1101-2021_02_08_430275	96	27	an	an	DT
10_1101-2021_02_08_430275	96	28	sSNP	ssnp	NN
10_1101-2021_02_08_430275	96	29	/	/	SYM
10_1101-2021_02_08_430275	96	30	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	96	31	ratio	ratio	NN
10_1101-2021_02_08_430275	96	32	of	of	IN
10_1101-2021_02_08_430275	96	33	0.0615	0.0615	CD
10_1101-2021_02_08_430275	96	34	;	;	:
10_1101-2021_02_08_430275	96	35	the	the	DT
10_1101-2021_02_08_430275	96	36	position	position	NN
10_1101-2021_02_08_430275	96	37	of	of	IN
10_1101-2021_02_08_430275	96	38	the247	the247	CD
10_1101-2021_02_08_430275	96	39	peak	peak	VB
10_1101-2021_02_08_430275	96	40	on	on	IN
10_1101-2021_02_08_430275	96	41	chromosome	chromosome	NN
10_1101-2021_02_08_430275	96	42	11	11	CD
10_1101-2021_02_08_430275	96	43	was	be	VBD
10_1101-2021_02_08_430275	96	44	at	at	IN
10_1101-2021_02_08_430275	96	45	26.44	26.44	CD
10_1101-2021_02_08_430275	96	46	Mb	Mb	NNP
10_1101-2021_02_08_430275	96	47	,	,	,
10_1101-2021_02_08_430275	96	48	the	the	DT
10_1101-2021_02_08_430275	96	49	sliding	slide	VBG
10_1101-2021_02_08_430275	96	50	window248	window248	NNP
10_1101-2021_02_08_430275	96	51	contained	contain	VBD
10_1101-2021_02_08_430275	96	52	675	675	CD
10_1101-2021_02_08_430275	96	53	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	96	54	and	and	CC
10_1101-2021_02_08_430275	96	55	1139	1139	CD
10_1101-2021_02_08_430275	96	56	total	total	JJ
10_1101-2021_02_08_430275	96	57	SNPs	snp	NNS
10_1101-2021_02_08_430275	96	58	,	,	,
10_1101-2021_02_08_430275	96	59	corresponding	correspond	VBG
10_1101-2021_02_08_430275	96	60	to	to	IN
10_1101-2021_02_08_430275	96	61	an249	an249	NNP
10_1101-2021_02_08_430275	96	62	sSNP	ssnp	NN
10_1101-2021_02_08_430275	96	63	/	/	SYM
10_1101-2021_02_08_430275	96	64	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	96	65	ratio	ratio	NN
10_1101-2021_02_08_430275	96	66	of	of	IN
10_1101-2021_02_08_430275	96	67	0.5926	0.5926	CD
10_1101-2021_02_08_430275	96	68	.	.	.
10_1101-2021_02_08_430275	97	1	The	the	DT
10_1101-2021_02_08_430275	97	2	sliding	slide	VBG
10_1101-2021_02_08_430275	97	3	window	window	NN
10_1101-2021_02_08_430275	97	4	-	-	HYPH
10_1101-2021_02_08_430275	97	5	specific	specific	JJ
10_1101-2021_02_08_430275	97	6	250	250	CD
10_1101-2021_02_08_430275	97	7	threshold	threshold	NN
10_1101-2021_02_08_430275	97	8	was	be	VBD
10_1101-2021_02_08_430275	97	9	estimated	estimate	VBN
10_1101-2021_02_08_430275	97	10	for	for	IN
10_1101-2021_02_08_430275	97	11	each	each	DT
10_1101-2021_02_08_430275	97	12	peak	peak	NN
10_1101-2021_02_08_430275	97	13	via	via	IN
10_1101-2021_02_08_430275	97	14	simulation	simulation	NN
10_1101-2021_02_08_430275	97	15	,	,	,
10_1101-2021_02_08_430275	97	16	and	and	CC
10_1101-2021_02_08_430275	97	17	251	251	CD
10_1101-2021_02_08_430275	97	18	the	the	DT
10_1101-2021_02_08_430275	97	19	values	value	NNS
10_1101-2021_02_08_430275	97	20	were	be	VBD
10_1101-2021_02_08_430275	97	21	0.0551	0.0551	CD
10_1101-2021_02_08_430275	97	22	and	and	CC
10_1101-2021_02_08_430275	97	23	0.0623	0.0623	CD
10_1101-2021_02_08_430275	97	24	,	,	,
10_1101-2021_02_08_430275	97	25	respectively	respectively	RB
10_1101-2021_02_08_430275	97	26	,	,	,
10_1101-2021_02_08_430275	97	27	indicating	indicate	VBG
10_1101-2021_02_08_430275	97	28	252	252	CD
10_1101-2021_02_08_430275	97	29	both	both	DT
10_1101-2021_02_08_430275	97	30	peaks	peak	NNS
10_1101-2021_02_08_430275	97	31	were	be	VBD
10_1101-2021_02_08_430275	97	32	significant	significant	JJ
10_1101-2021_02_08_430275	97	33	.	.	.
10_1101-2021_02_08_430275	98	1	Both	both	DT
10_1101-2021_02_08_430275	98	2	values	value	NNS
10_1101-2021_02_08_430275	98	3	are	be	VBP
10_1101-2021_02_08_430275	98	4	higher	high	JJR
10_1101-2021_02_08_430275	98	5	than	than	IN
10_1101-2021_02_08_430275	98	6	the	the	DT
10_1101-2021_02_08_430275	98	7	253	253	CD
10_1101-2021_02_08_430275	98	8	genome	genome	NN
10_1101-2021_02_08_430275	98	9	-	-	HYPH
10_1101-2021_02_08_430275	98	10	wide	wide	JJ
10_1101-2021_02_08_430275	98	11	threshold	threshold	NN
10_1101-2021_02_08_430275	98	12	,	,	,
10_1101-2021_02_08_430275	98	13	probably	probably	RB
10_1101-2021_02_08_430275	98	14	due	due	IN
10_1101-2021_02_08_430275	98	15	to	to	IN
10_1101-2021_02_08_430275	98	16	the	the	DT
10_1101-2021_02_08_430275	98	17	lower	low	JJR
10_1101-2021_02_08_430275	98	18	amounts	amount	NNS
10_1101-2021_02_08_430275	98	19	of	of	IN
10_1101-2021_02_08_430275	98	20	254	254	CD
10_1101-2021_02_08_430275	98	21	total	total	JJ
10_1101-2021_02_08_430275	98	22	SNPs	snp	NNS
10_1101-2021_02_08_430275	98	23	in	in	IN
10_1101-2021_02_08_430275	98	24	these	these	DT
10_1101-2021_02_08_430275	98	25	sliding	slide	VBG
10_1101-2021_02_08_430275	98	26	windows	window	NNS
10_1101-2021_02_08_430275	98	27	.	.	.
10_1101-2021_02_08_430275	99	1	The	the	DT
10_1101-2021_02_08_430275	99	2	average	average	JJ
10_1101-2021_02_08_430275	99	3	SNPs	snp	NNS
10_1101-2021_02_08_430275	99	4	per	per	IN
10_1101-2021_02_08_430275	99	5	255	255	CD
10_1101-2021_02_08_430275	99	6	sliding	slide	VBG
10_1101-2021_02_08_430275	99	7	window	window	NN
10_1101-2021_02_08_430275	99	8	was	be	VBD
10_1101-2021_02_08_430275	99	9	5893	5893	CD
10_1101-2021_02_08_430275	99	10	.	.	.
10_1101-2021_02_08_430275	100	1	256	256	CD
10_1101-2021_02_08_430275	100	2	The	the	DT
10_1101-2021_02_08_430275	100	3	G	g	NN
10_1101-2021_02_08_430275	100	4	-	-	HYPH
10_1101-2021_02_08_430275	100	5	statistic	statistic	NN
10_1101-2021_02_08_430275	100	6	method	method	NN
10_1101-2021_02_08_430275	100	7	:	:	:
10_1101-2021_02_08_430275	100	8	The	the	DT
10_1101-2021_02_08_430275	100	9	G	g	NN
10_1101-2021_02_08_430275	100	10	-	-	HYPH
10_1101-2021_02_08_430275	100	11	statistic	statistic	NN
10_1101-2021_02_08_430275	100	12	value	value	NN
10_1101-2021_02_08_430275	100	13	of	of	IN
10_1101-2021_02_08_430275	100	14	each	each	DT
10_1101-2021_02_08_430275	100	15	SNP	SNP	NNP
10_1101-2021_02_08_430275	100	16	257	257	CD
10_1101-2021_02_08_430275	100	17	in	in	IN
10_1101-2021_02_08_430275	100	18	the	the	DT
10_1101-2021_02_08_430275	100	19	dataset	dataset	NN
10_1101-2021_02_08_430275	100	20	was	be	VBD
10_1101-2021_02_08_430275	100	21	calculated	calculate	VBN
10_1101-2021_02_08_430275	100	22	,	,	,
10_1101-2021_02_08_430275	100	23	and	and	CC
10_1101-2021_02_08_430275	100	24	its	-PRON-	PRP$
10_1101-2021_02_08_430275	100	25	threshold	threshold	NN
10_1101-2021_02_08_430275	100	26	was	be	VBD
10_1101-2021_02_08_430275	100	27	estimated	estimate	VBN
10_1101-2021_02_08_430275	100	28	258	258	CD
10_1101-2021_02_08_430275	100	29	via	via	IN
10_1101-2021_02_08_430275	100	30	simulation	simulation	NN
10_1101-2021_02_08_430275	100	31	as	as	IN
10_1101-2021_02_08_430275	100	32	described	describe	VBN
10_1101-2021_02_08_430275	100	33	previously	previously	RB
10_1101-2021_02_08_430275	100	34	(	(	-LRB-
10_1101-2021_02_08_430275	100	35	8)	8)	CD
10_1101-2021_02_08_430275	100	36	.	.	.
10_1101-2021_02_08_430275	101	1	Using	use	VBG
10_1101-2021_02_08_430275	101	2	the	the	DT
10_1101-2021_02_08_430275	101	3	sliding	slide	VBG
10_1101-2021_02_08_430275	101	4	259	259	CD
10_1101-2021_02_08_430275	101	5	window	window	NN
10_1101-2021_02_08_430275	101	6	algorithm	algorithm	NN
10_1101-2021_02_08_430275	101	7	,	,	,
10_1101-2021_02_08_430275	101	8	the	the	DT
10_1101-2021_02_08_430275	101	9	G	g	NN
10_1101-2021_02_08_430275	101	10	-	-	HYPH
10_1101-2021_02_08_430275	101	11	statistic	statistic	NN
10_1101-2021_02_08_430275	101	12	value	value	NN
10_1101-2021_02_08_430275	101	13	of	of	IN
10_1101-2021_02_08_430275	101	14	each	each	DT
10_1101-2021_02_08_430275	101	15	sliding	slide	VBG
10_1101-2021_02_08_430275	101	16	win-	win-	XX
10_1101-2021_02_08_430275	101	17	260	260	CD
10_1101-2021_02_08_430275	101	18	dow	dow	NNP
10_1101-2021_02_08_430275	101	19	,	,	,
10_1101-2021_02_08_430275	101	20	the	the	DT
10_1101-2021_02_08_430275	101	21	average	average	JJ
10_1101-2021_02_08_430275	101	22	G	g	NN
10_1101-2021_02_08_430275	101	23	-	-	HYPH
10_1101-2021_02_08_430275	101	24	statistic	statistic	NN
10_1101-2021_02_08_430275	101	25	values	value	NNS
10_1101-2021_02_08_430275	101	26	of	of	IN
10_1101-2021_02_08_430275	101	27	all	all	DT
10_1101-2021_02_08_430275	101	28	SNPs	snp	NNS
10_1101-2021_02_08_430275	101	29	in	in	IN
10_1101-2021_02_08_430275	101	30	that	that	DT
10_1101-2021_02_08_430275	101	31	sliding	slide	VBG
10_1101-2021_02_08_430275	101	32	261	261	CD
10_1101-2021_02_08_430275	101	33	window	window	NN
10_1101-2021_02_08_430275	101	34	,	,	,
10_1101-2021_02_08_430275	101	35	was	be	VBD
10_1101-2021_02_08_430275	101	36	plotted	plot	VBN
10_1101-2021_02_08_430275	101	37	against	against	IN
10_1101-2021_02_08_430275	101	38	its	-PRON-	PRP$
10_1101-2021_02_08_430275	101	39	genomic	genomic	JJ
10_1101-2021_02_08_430275	101	40	position	position	NN
10_1101-2021_02_08_430275	101	41	(	(	-LRB-
10_1101-2021_02_08_430275	101	42	Figure	Figure	NNP
10_1101-2021_02_08_430275	101	43	1c	1c	NNP
10_1101-2021_02_08_430275	101	44	)	)	-RRB-
10_1101-2021_02_08_430275	101	45	,	,	,
10_1101-2021_02_08_430275	101	46	262	262	CD
10_1101-2021_02_08_430275	101	47	and	and	CC
10_1101-2021_02_08_430275	101	48	the	the	DT
10_1101-2021_02_08_430275	101	49	curve	curve	NN
10_1101-2021_02_08_430275	101	50	pattern	pattern	NN
10_1101-2021_02_08_430275	101	51	was	be	VBD
10_1101-2021_02_08_430275	101	52	very	very	RB
10_1101-2021_02_08_430275	101	53	similar	similar	JJ
10_1101-2021_02_08_430275	101	54	to	to	IN
10_1101-2021_02_08_430275	101	55	that	that	DT
10_1101-2021_02_08_430275	101	56	in	in	IN
10_1101-2021_02_08_430275	101	57	Figure	Figure	NNP
10_1101-2021_02_08_430275	101	58	1b	1b	NN
10_1101-2021_02_08_430275	101	59	.	.	.
10_1101-2021_02_08_430275	102	1	A	a	DT
10_1101-2021_02_08_430275	102	2	263	263	CD
10_1101-2021_02_08_430275	102	3	significant	significant	JJ
10_1101-2021_02_08_430275	102	4	peak	peak	NN
10_1101-2021_02_08_430275	102	5	was	be	VBD
10_1101-2021_02_08_430275	102	6	identified	identify	VBN
10_1101-2021_02_08_430275	102	7	on	on	IN
10_1101-2021_02_08_430275	102	8	chromosome	chromosome	NN
10_1101-2021_02_08_430275	102	9	11	11	CD
10_1101-2021_02_08_430275	102	10	;	;	:
10_1101-2021_02_08_430275	102	11	its	-PRON-	PRP$
10_1101-2021_02_08_430275	102	12	position	position	NN
10_1101-2021_02_08_430275	102	13	264	264	CD
10_1101-2021_02_08_430275	102	14	was	be	VBD
10_1101-2021_02_08_430275	102	15	at	at	IN
10_1101-2021_02_08_430275	102	16	26.49	26.49	CD
10_1101-2021_02_08_430275	102	17	Mb	Mb	NNS
10_1101-2021_02_08_430275	102	18	,	,	,
10_1101-2021_02_08_430275	102	19	its	-PRON-	PRP$
10_1101-2021_02_08_430275	102	20	G	g	NN
10_1101-2021_02_08_430275	102	21	-	-	HYPH
10_1101-2021_02_08_430275	102	22	statistic	statistic	NN
10_1101-2021_02_08_430275	102	23	value	value	NN
10_1101-2021_02_08_430275	102	24	was	be	VBD
10_1101-2021_02_08_430275	102	25	12.8120	12.8120	CD
10_1101-2021_02_08_430275	102	26	,	,	,
10_1101-2021_02_08_430275	102	27	well	well	RB
10_1101-2021_02_08_430275	102	28	above	above	IN
10_1101-2021_02_08_430275	102	29	265	265	CD
10_1101-2021_02_08_430275	102	30	the	the	DT
10_1101-2021_02_08_430275	102	31	threshold	threshold	NN
10_1101-2021_02_08_430275	102	32	9.0224	9.0224	CD
10_1101-2021_02_08_430275	102	33	(	(	-LRB-
10_1101-2021_02_08_430275	102	34	99.5th	99.5th	NN
10_1101-2021_02_08_430275	102	35	percentile	percentile	NN
10_1101-2021_02_08_430275	102	36	)	)	-RRB-
10_1101-2021_02_08_430275	102	37	.	.	.
10_1101-2021_02_08_430275	103	1	266	266	CD
10_1101-2021_02_08_430275	103	2	The	the	DT
10_1101-2021_02_08_430275	103	3	allele	allele	NN
10_1101-2021_02_08_430275	103	4	frequency	frequency	NN
10_1101-2021_02_08_430275	103	5	method	method	NN
10_1101-2021_02_08_430275	103	6	:	:	:
10_1101-2021_02_08_430275	103	7	The	the	DT
10_1101-2021_02_08_430275	103	8	ΔAF	δaf	NN
10_1101-2021_02_08_430275	103	9	value	value	NN
10_1101-2021_02_08_430275	103	10	of	of	IN
10_1101-2021_02_08_430275	103	11	each	each	DT
10_1101-2021_02_08_430275	103	12	SNP	SNP	NNP
10_1101-2021_02_08_430275	103	13	in	in	IN
10_1101-2021_02_08_430275	103	14	267	267	CD
10_1101-2021_02_08_430275	103	15	the	the	DT
10_1101-2021_02_08_430275	103	16	dataset	dataset	NN
10_1101-2021_02_08_430275	103	17	was	be	VBD
10_1101-2021_02_08_430275	103	18	calculated	calculate	VBN
10_1101-2021_02_08_430275	103	19	,	,	,
10_1101-2021_02_08_430275	103	20	and	and	CC
10_1101-2021_02_08_430275	103	21	the	the	DT
10_1101-2021_02_08_430275	103	22	ΔAF	δaf	NN
10_1101-2021_02_08_430275	103	23	threshold	threshold	NN
10_1101-2021_02_08_430275	103	24	of	of	IN
10_1101-2021_02_08_430275	103	25	the	the	DT
10_1101-2021_02_08_430275	103	26	SNP	SNP	NNP
10_1101-2021_02_08_430275	103	27	268	268	CD
10_1101-2021_02_08_430275	103	28	was	be	VBD
10_1101-2021_02_08_430275	103	29	estimated	estimate	VBN
10_1101-2021_02_08_430275	103	30	via	via	IN
10_1101-2021_02_08_430275	103	31	simulation	simulation	NN
10_1101-2021_02_08_430275	103	32	as	as	IN
10_1101-2021_02_08_430275	103	33	described	describe	VBN
10_1101-2021_02_08_430275	103	34	previously	previously	RB
10_1101-2021_02_08_430275	103	35	(	(	-LRB-
10_1101-2021_02_08_430275	103	36	8)	8)	CD
10_1101-2021_02_08_430275	103	37	.	.	.
10_1101-2021_02_08_430275	104	1	Using	use	VBG
10_1101-2021_02_08_430275	104	2	269	269	CD
10_1101-2021_02_08_430275	104	3	the	the	DT
10_1101-2021_02_08_430275	104	4	sliding	slide	VBG
10_1101-2021_02_08_430275	104	5	window	window	NN
10_1101-2021_02_08_430275	104	6	algorithm	algorithm	NN
10_1101-2021_02_08_430275	104	7	,	,	,
10_1101-2021_02_08_430275	104	8	the	the	DT
10_1101-2021_02_08_430275	104	9	ΔAF	δaf	NN
10_1101-2021_02_08_430275	104	10	value	value	NN
10_1101-2021_02_08_430275	104	11	of	of	IN
10_1101-2021_02_08_430275	104	12	each	each	DT
10_1101-2021_02_08_430275	104	13	sliding	slide	VBG
10_1101-2021_02_08_430275	104	14	270	270	CD
10_1101-2021_02_08_430275	104	15	window	window	NN
10_1101-2021_02_08_430275	104	16	,	,	,
10_1101-2021_02_08_430275	104	17	the	the	DT
10_1101-2021_02_08_430275	104	18	average	average	JJ
10_1101-2021_02_08_430275	104	19	ΔAF	δaf	NN
10_1101-2021_02_08_430275	104	20	values	value	NNS
10_1101-2021_02_08_430275	104	21	of	of	IN
10_1101-2021_02_08_430275	104	22	all	all	DT
10_1101-2021_02_08_430275	104	23	SNPs	snp	NNS
10_1101-2021_02_08_430275	104	24	in	in	IN
10_1101-2021_02_08_430275	104	25	that	that	DT
10_1101-2021_02_08_430275	104	26	sliding	slide	VBG
10_1101-2021_02_08_430275	104	27	271	271	CD
10_1101-2021_02_08_430275	104	28	window	window	NN
10_1101-2021_02_08_430275	104	29	,	,	,
10_1101-2021_02_08_430275	104	30	was	be	VBD
10_1101-2021_02_08_430275	104	31	plotted	plot	VBN
10_1101-2021_02_08_430275	104	32	against	against	IN
10_1101-2021_02_08_430275	104	33	its	-PRON-	PRP$
10_1101-2021_02_08_430275	104	34	genomic	genomic	JJ
10_1101-2021_02_08_430275	104	35	position	position	NN
10_1101-2021_02_08_430275	104	36	(	(	-LRB-
10_1101-2021_02_08_430275	104	37	Figure	Figure	NNP
10_1101-2021_02_08_430275	104	38	1d	1d	CD
10_1101-2021_02_08_430275	104	39	)	)	-RRB-
10_1101-2021_02_08_430275	104	40	.	.	.
10_1101-2021_02_08_430275	105	1	272	272	CD
10_1101-2021_02_08_430275	105	2	A	a	DT
10_1101-2021_02_08_430275	105	3	significant	significant	JJ
10_1101-2021_02_08_430275	105	4	peak	peak	NN
10_1101-2021_02_08_430275	105	5	on	on	IN
10_1101-2021_02_08_430275	105	6	chromosome	chromosome	NN
10_1101-2021_02_08_430275	105	7	11	11	CD
10_1101-2021_02_08_430275	105	8	was	be	VBD
10_1101-2021_02_08_430275	105	9	identified	identify	VBN
10_1101-2021_02_08_430275	105	10	,	,	,
10_1101-2021_02_08_430275	105	11	the	the	DT
10_1101-2021_02_08_430275	105	12	peak	peak	NN
10_1101-2021_02_08_430275	105	13	273	273	CD
10_1101-2021_02_08_430275	105	14	position	position	NN
10_1101-2021_02_08_430275	105	15	was	be	VBD
10_1101-2021_02_08_430275	105	16	located	locate	VBN
10_1101-2021_02_08_430275	105	17	at	at	IN
10_1101-2021_02_08_430275	105	18	26.45	26.45	CD
10_1101-2021_02_08_430275	105	19	Mb	Mb	NNP
10_1101-2021_02_08_430275	105	20	,	,	,
10_1101-2021_02_08_430275	105	21	its	-PRON-	PRP$
10_1101-2021_02_08_430275	105	22	ΔAF	δaf	NN
10_1101-2021_02_08_430275	105	23	value	value	NN
10_1101-2021_02_08_430275	105	24	was	be	VBD
10_1101-2021_02_08_430275	105	25	0.7173	0.7173	CD
10_1101-2021_02_08_430275	105	26	,	,	,
10_1101-2021_02_08_430275	105	27	274	274	CD
10_1101-2021_02_08_430275	105	28	and	and	CC
10_1101-2021_02_08_430275	105	29	the	the	DT
10_1101-2021_02_08_430275	105	30	99	99	CD
10_1101-2021_02_08_430275	105	31	%	%	NN
10_1101-2021_02_08_430275	105	32	confidence	confidence	NN
10_1101-2021_02_08_430275	105	33	interval	interval	NN
10_1101-2021_02_08_430275	105	34	was	be	VBD
10_1101-2021_02_08_430275	105	35	−0.6508	−0.6508	NNP
10_1101-2021_02_08_430275	105	36	to	to	IN
10_1101-2021_02_08_430275	105	37	0.6497	0.6497	CD
10_1101-2021_02_08_430275	105	38	.	.	.
10_1101-2021_02_08_430275	106	1	275	275	CD
10_1101-2021_02_08_430275	106	2	BSA	BSA	NNP
10_1101-2021_02_08_430275	106	3	-	-	HYPH
10_1101-2021_02_08_430275	106	4	Seq	seq	NN
10_1101-2021_02_08_430275	106	5	data	data	NN
10_1101-2021_02_08_430275	106	6	analysis	analysis	NN
10_1101-2021_02_08_430275	106	7	using	use	VBG
10_1101-2021_02_08_430275	106	8	only	only	RB
10_1101-2021_02_08_430275	106	9	the	the	DT
10_1101-2021_02_08_430275	106	10	bulk	bulk	JJ
10_1101-2021_02_08_430275	106	11	genome	genome	NN
10_1101-2021_02_08_430275	106	12	se-	se-	NNP
10_1101-2021_02_08_430275	106	13	276	276	CD
10_1101-2021_02_08_430275	106	14	quences	quence	NNS
10_1101-2021_02_08_430275	106	15	.	.	.
10_1101-2021_02_08_430275	107	1	The	the	DT
10_1101-2021_02_08_430275	107	2	SNP	SNP	NNP
10_1101-2021_02_08_430275	107	3	calling	call	VBG
10_1101-2021_02_08_430275	107	4	-	-	HYPH
10_1101-2021_02_08_430275	107	5	generated	generate	VBN
10_1101-2021_02_08_430275	107	6	bulk	bulk	JJ
10_1101-2021_02_08_430275	107	7	SNP	SNP	NNP
10_1101-2021_02_08_430275	107	8	dataset	dataset	NN
10_1101-2021_02_08_430275	107	9	was	be	VBD
10_1101-2021_02_08_430275	107	10	277	277	CD
10_1101-2021_02_08_430275	107	11	processed	process	VBN
10_1101-2021_02_08_430275	107	12	with	with	IN
10_1101-2021_02_08_430275	107	13	the	the	DT
10_1101-2021_02_08_430275	107	14	Python	Python	NNP
10_1101-2021_02_08_430275	107	15	script	script	NN
10_1101-2021_02_08_430275	107	16	PyBSASeq.py	pybsaseq.py	NN
10_1101-2021_02_08_430275	107	17	.	.	.
10_1101-2021_02_08_430275	108	1	All	all	PDT
10_1101-2021_02_08_430275	108	2	the	the	DT
10_1101-2021_02_08_430275	108	3	meth-	meth-	JJ
10_1101-2021_02_08_430275	108	4	278	278	CD
10_1101-2021_02_08_430275	108	5	ods	od	NNS
10_1101-2021_02_08_430275	108	6	and	and	CC
10_1101-2021_02_08_430275	108	7	parameters	parameter	NNS
10_1101-2021_02_08_430275	108	8	were	be	VBD
10_1101-2021_02_08_430275	108	9	the	the	DT
10_1101-2021_02_08_430275	108	10	same	same	JJ
10_1101-2021_02_08_430275	108	11	as	as	IN
10_1101-2021_02_08_430275	108	12	above	above	RB
10_1101-2021_02_08_430275	108	13	;	;	:
10_1101-2021_02_08_430275	108	14	the	the	DT
10_1101-2021_02_08_430275	108	15	only	only	JJ
10_1101-2021_02_08_430275	108	16	difference	difference	NN
10_1101-2021_02_08_430275	108	17	279	279	CD
10_1101-2021_02_08_430275	108	18	was	be	VBD
10_1101-2021_02_08_430275	108	19	that	that	IN
10_1101-2021_02_08_430275	108	20	the	the	DT
10_1101-2021_02_08_430275	108	21	parental	parental	JJ
10_1101-2021_02_08_430275	108	22	SNP	SNP	NNP
10_1101-2021_02_08_430275	108	23	dataset	dataset	NN
10_1101-2021_02_08_430275	108	24	was	be	VBD
10_1101-2021_02_08_430275	108	25	not	not	RB
10_1101-2021_02_08_430275	108	26	used	use	VBN
10_1101-2021_02_08_430275	108	27	.	.	.
10_1101-2021_02_08_430275	109	1	280	280	CD
10_1101-2021_02_08_430275	109	2	The	the	DT
10_1101-2021_02_08_430275	109	3	significant	significant	JJ
10_1101-2021_02_08_430275	109	4	structural	structural	JJ
10_1101-2021_02_08_430275	109	5	variant	variant	JJ
10_1101-2021_02_08_430275	109	6	method	method	NN
10_1101-2021_02_08_430275	109	7	:	:	:
10_1101-2021_02_08_430275	109	8	The	the	DT
10_1101-2021_02_08_430275	109	9	chromoso-	chromoso-	JJ
10_1101-2021_02_08_430275	109	10	281	281	CD
10_1101-2021_02_08_430275	109	11	mal	mal	JJ
10_1101-2021_02_08_430275	109	12	distribution	distribution	NN
10_1101-2021_02_08_430275	109	13	of	of	IN
10_1101-2021_02_08_430275	109	14	the	the	DT
10_1101-2021_02_08_430275	109	15	sSNPs	ssnps	NN
10_1101-2021_02_08_430275	109	16	and	and	CC
10_1101-2021_02_08_430275	109	17	total	total	JJ
10_1101-2021_02_08_430275	109	18	SNPs	snp	NNS
10_1101-2021_02_08_430275	109	19	are	be	VBP
10_1101-2021_02_08_430275	109	20	summarized	summarize	VBN
10_1101-2021_02_08_430275	109	21	282	282	CD
10_1101-2021_02_08_430275	109	22	in	in	IN
10_1101-2021_02_08_430275	109	23	Table	table	NN
10_1101-2021_02_08_430275	109	24	2	2	CD
10_1101-2021_02_08_430275	109	25	.	.	.
10_1101-2021_02_08_430275	110	1	The	the	DT
10_1101-2021_02_08_430275	110	2	total	total	JJ
10_1101-2021_02_08_430275	110	3	number	number	NN
10_1101-2021_02_08_430275	110	4	of	of	IN
10_1101-2021_02_08_430275	110	5	SNPs	snp	NNS
10_1101-2021_02_08_430275	110	6	was	be	VBD
10_1101-2021_02_08_430275	110	7	1	1	CD
10_1101-2021_02_08_430275	110	8	346	346	CD
10_1101-2021_02_08_430275	110	9	185	185	CD
10_1101-2021_02_08_430275	110	10	here	here	RB
10_1101-2021_02_08_430275	110	11	,	,	,
10_1101-2021_02_08_430275	110	12	283	283	CD
10_1101-2021_02_08_430275	110	13	much	much	RB
10_1101-2021_02_08_430275	110	14	higher	high	JJR
10_1101-2021_02_08_430275	110	15	than	than	IN
10_1101-2021_02_08_430275	110	16	the	the	DT
10_1101-2021_02_08_430275	110	17	above	above	JJ
10_1101-2021_02_08_430275	110	18	,	,	,
10_1101-2021_02_08_430275	110	19	which	which	WDT
10_1101-2021_02_08_430275	110	20	was	be	VBD
10_1101-2021_02_08_430275	110	21	1	1	CD
10_1101-2021_02_08_430275	110	22	099	099	CD
10_1101-2021_02_08_430275	110	23	516	516	CD
10_1101-2021_02_08_430275	110	24	.	.	.
10_1101-2021_02_08_430275	111	1	The	the	DT
10_1101-2021_02_08_430275	111	2	ge-	ge-	NN
10_1101-2021_02_08_430275	111	3	284	284	CD
10_1101-2021_02_08_430275	111	4	nomic	nomic	JJ
10_1101-2021_02_08_430275	111	5	distribution	distribution	NN
10_1101-2021_02_08_430275	111	6	of	of	IN
10_1101-2021_02_08_430275	111	7	the	the	DT
10_1101-2021_02_08_430275	111	8	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	111	9	,	,	,
10_1101-2021_02_08_430275	111	10	the	the	DT
10_1101-2021_02_08_430275	111	11	total	total	JJ
10_1101-2021_02_08_430275	111	12	SNPs	snp	NNS
10_1101-2021_02_08_430275	111	13	,	,	,
10_1101-2021_02_08_430275	111	14	and	and	CC
10_1101-2021_02_08_430275	111	15	the	the	DT
10_1101-2021_02_08_430275	111	16	285	285	CD
10_1101-2021_02_08_430275	111	17	sSNP	ssnp	NN
10_1101-2021_02_08_430275	111	18	/	/	SYM
10_1101-2021_02_08_430275	111	19	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	111	20	ratios	ratio	NNS
10_1101-2021_02_08_430275	111	21	of	of	IN
10_1101-2021_02_08_430275	111	22	the	the	DT
10_1101-2021_02_08_430275	111	23	sliding	slide	VBG
10_1101-2021_02_08_430275	111	24	windows	window	NNS
10_1101-2021_02_08_430275	111	25	are	be	VBP
10_1101-2021_02_08_430275	111	26	presented	present	VBN
10_1101-2021_02_08_430275	111	27	286	286	CD
10_1101-2021_02_08_430275	111	28	in	in	IN
10_1101-2021_02_08_430275	111	29	Figure	Figure	NNP
10_1101-2021_02_08_430275	111	30	2a	2a	NNP
10_1101-2021_02_08_430275	111	31	and	and	CC
10_1101-2021_02_08_430275	111	32	Figure	Figure	NNP
10_1101-2021_02_08_430275	111	33	2b	2b	NNS
10_1101-2021_02_08_430275	111	34	.	.	.
10_1101-2021_02_08_430275	112	1	The	the	DT
10_1101-2021_02_08_430275	112	2	patterns	pattern	NNS
10_1101-2021_02_08_430275	112	3	of	of	IN
10_1101-2021_02_08_430275	112	4	the	the	DT
10_1101-2021_02_08_430275	112	5	curves	curve	NNS
10_1101-2021_02_08_430275	112	6	were	be	VBD
10_1101-2021_02_08_430275	112	7	287	287	CD
10_1101-2021_02_08_430275	112	8	very	very	RB
10_1101-2021_02_08_430275	112	9	similar	similar	JJ
10_1101-2021_02_08_430275	112	10	to	to	IN
10_1101-2021_02_08_430275	112	11	those	those	DT
10_1101-2021_02_08_430275	112	12	in	in	IN
10_1101-2021_02_08_430275	112	13	Figure	Figure	NNP
10_1101-2021_02_08_430275	112	14	1a	1a	NNP
10_1101-2021_02_08_430275	112	15	and	and	CC
10_1101-2021_02_08_430275	112	16	Figure	Figure	NNP
10_1101-2021_02_08_430275	112	17	1b	1b	NN
10_1101-2021_02_08_430275	112	18	.	.	.
10_1101-2021_02_08_430275	113	1	One	one	CD
10_1101-2021_02_08_430275	113	2	of	of	IN
10_1101-2021_02_08_430275	113	3	the	the	DT
10_1101-2021_02_08_430275	113	4	288	288	CD
10_1101-2021_02_08_430275	113	5	obvious	obvious	JJ
10_1101-2021_02_08_430275	113	6	differences	difference	NNS
10_1101-2021_02_08_430275	113	7	was	be	VBD
10_1101-2021_02_08_430275	113	8	that	that	DT
10_1101-2021_02_08_430275	113	9	sSNP	ssnp	NN
10_1101-2021_02_08_430275	113	10	/	/	SYM
10_1101-2021_02_08_430275	113	11	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	113	12	ratios	ratio	NNS
10_1101-2021_02_08_430275	113	13	of	of	IN
10_1101-2021_02_08_430275	113	14	the	the	DT
10_1101-2021_02_08_430275	113	15	slid-	slid-	NN
10_1101-2021_02_08_430275	113	16	289	289	CD
10_1101-2021_02_08_430275	113	17	ing	e	VBG
10_1101-2021_02_08_430275	113	18	windows	window	NNS
10_1101-2021_02_08_430275	113	19	were	be	VBD
10_1101-2021_02_08_430275	113	20	much	much	RB
10_1101-2021_02_08_430275	113	21	lower	low	JJR
10_1101-2021_02_08_430275	113	22	than	than	IN
10_1101-2021_02_08_430275	113	23	those	those	DT
10_1101-2021_02_08_430275	113	24	in	in	IN
10_1101-2021_02_08_430275	113	25	Figure	Figure	NNP
10_1101-2021_02_08_430275	113	26	1b	1b	NN
10_1101-2021_02_08_430275	113	27	,	,	,
10_1101-2021_02_08_430275	113	28	leading	lead	VBG
10_1101-2021_02_08_430275	113	29	290	290	CD
10_1101-2021_02_08_430275	113	30	to	to	IN
10_1101-2021_02_08_430275	113	31	missing	miss	VBG
10_1101-2021_02_08_430275	113	32	the	the	DT
10_1101-2021_02_08_430275	113	33	minor	minor	JJ
10_1101-2021_02_08_430275	113	34	locus	locus	NN
10_1101-2021_02_08_430275	113	35	on	on	IN
10_1101-2021_02_08_430275	113	36	chromosome	chromosome	NN
10_1101-2021_02_08_430275	113	37	9	9	CD
10_1101-2021_02_08_430275	113	38	.	.	.
10_1101-2021_02_08_430275	114	1	Only	only	RB
10_1101-2021_02_08_430275	114	2	the	the	DT
10_1101-2021_02_08_430275	114	3	peak	peak	NN
10_1101-2021_02_08_430275	114	4	291	291	CD
10_1101-2021_02_08_430275	114	5	on	on	IN
10_1101-2021_02_08_430275	114	6	chromosome	chromosome	NN
10_1101-2021_02_08_430275	114	7	11	11	CD
10_1101-2021_02_08_430275	114	8	was	be	VBD
10_1101-2021_02_08_430275	114	9	significant	significant	JJ
10_1101-2021_02_08_430275	114	10	;	;	:
10_1101-2021_02_08_430275	114	11	it	-PRON-	PRP
10_1101-2021_02_08_430275	114	12	was	be	VBD
10_1101-2021_02_08_430275	114	13	located	locate	VBN
10_1101-2021_02_08_430275	114	14	at	at	IN
10_1101-2021_02_08_430275	114	15	26.96	26.96	CD
10_1101-2021_02_08_430275	114	16	Mb	Mb	NNP
10_1101-2021_02_08_430275	114	17	,	,	,
10_1101-2021_02_08_430275	114	18	292	292	CD
10_1101-2021_02_08_430275	114	19	a	a	DT
10_1101-2021_02_08_430275	114	20	520	520	CD
10_1101-2021_02_08_430275	114	21	kb	kb	NN
10_1101-2021_02_08_430275	114	22	shift	shift	NN
10_1101-2021_02_08_430275	114	23	compared	compare	VBN
10_1101-2021_02_08_430275	114	24	to	to	IN
10_1101-2021_02_08_430275	114	25	Figure	figure	NN
10_1101-2021_02_08_430275	114	26	1b	1b	NN
10_1101-2021_02_08_430275	114	27	.	.	.
10_1101-2021_02_08_430275	115	1	The	the	DT
10_1101-2021_02_08_430275	115	2	sliding	slide	VBG
10_1101-2021_02_08_430275	115	3	window	window	NN
10_1101-2021_02_08_430275	115	4	293	293	CD
10_1101-2021_02_08_430275	115	5	contained	contain	VBD
10_1101-2021_02_08_430275	115	6	1122	1122	CD
10_1101-2021_02_08_430275	115	7	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	115	8	and	and	CC
10_1101-2021_02_08_430275	115	9	2945	2945	CD
10_1101-2021_02_08_430275	115	10	total	total	JJ
10_1101-2021_02_08_430275	115	11	SNPs	snp	NNS
10_1101-2021_02_08_430275	115	12	,	,	,
10_1101-2021_02_08_430275	115	13	corresponding	correspond	VBG
10_1101-2021_02_08_430275	115	14	to	to	IN
10_1101-2021_02_08_430275	115	15	294	294	CD
10_1101-2021_02_08_430275	115	16	a	a	DT
10_1101-2021_02_08_430275	115	17	0.3810	0.3810	CD
10_1101-2021_02_08_430275	115	18	sSNP	ssnp	NN
10_1101-2021_02_08_430275	115	19	/	/	SYM
10_1101-2021_02_08_430275	115	20	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	115	21	ratio	ratio	NN
10_1101-2021_02_08_430275	115	22	,	,	,
10_1101-2021_02_08_430275	115	23	well	well	RB
10_1101-2021_02_08_430275	115	24	above	above	IN
10_1101-2021_02_08_430275	115	25	the	the	DT
10_1101-2021_02_08_430275	115	26	genome	genome	NN
10_1101-2021_02_08_430275	115	27	-	-	HYPH
10_1101-2021_02_08_430275	115	28	wide	wide	JJ
10_1101-2021_02_08_430275	115	29	295	295	CD
10_1101-2021_02_08_430275	115	30	threshold	threshold	NN
10_1101-2021_02_08_430275	115	31	(	(	-LRB-
10_1101-2021_02_08_430275	115	32	0.0535	0.0535	CD
10_1101-2021_02_08_430275	115	33	)	)	-RRB-
10_1101-2021_02_08_430275	115	34	and	and	CC
10_1101-2021_02_08_430275	115	35	the	the	DT
10_1101-2021_02_08_430275	115	36	sliding	slide	VBG
10_1101-2021_02_08_430275	115	37	window	window	NN
10_1101-2021_02_08_430275	115	38	specific	specific	NN
10_1101-2021_02_08_430275	115	39	threshold	threshold	NN
10_1101-2021_02_08_430275	115	40	296	296	CD
10_1101-2021_02_08_430275	115	41	(	(	-LRB-
10_1101-2021_02_08_430275	115	42	0.0601	0.0601	CD
10_1101-2021_02_08_430275	115	43	)	)	-RRB-
10_1101-2021_02_08_430275	115	44	.	.	.
10_1101-2021_02_08_430275	116	1	The	the	DT
10_1101-2021_02_08_430275	116	2	average	average	JJ
10_1101-2021_02_08_430275	116	3	SNPs	snp	NNS
10_1101-2021_02_08_430275	116	4	per	per	IN
10_1101-2021_02_08_430275	116	5	sliding	slide	VBG
10_1101-2021_02_08_430275	116	6	window	window	NN
10_1101-2021_02_08_430275	116	7	was	be	VBD
10_1101-2021_02_08_430275	116	8	7215	7215	CD
10_1101-2021_02_08_430275	116	9	.	.	.
10_1101-2021_02_08_430275	117	1	297	297	CD
10_1101-2021_02_08_430275	117	2	The	the	DT
10_1101-2021_02_08_430275	117	3	G	g	NN
10_1101-2021_02_08_430275	117	4	-	-	HYPH
10_1101-2021_02_08_430275	117	5	statistic	statistic	NN
10_1101-2021_02_08_430275	117	6	method	method	NN
10_1101-2021_02_08_430275	117	7	:	:	:
10_1101-2021_02_08_430275	117	8	The	the	DT
10_1101-2021_02_08_430275	117	9	patterns	pattern	NNS
10_1101-2021_02_08_430275	117	10	of	of	IN
10_1101-2021_02_08_430275	117	11	the	the	DT
10_1101-2021_02_08_430275	117	12	G	g	NN
10_1101-2021_02_08_430275	117	13	-	-	HYPH
10_1101-2021_02_08_430275	117	14	statistic	statistic	NNP
10_1101-2021_02_08_430275	117	15	298	298	CD
10_1101-2021_02_08_430275	117	16	value	value	NN
10_1101-2021_02_08_430275	117	17	plot	plot	NN
10_1101-2021_02_08_430275	117	18	(	(	-LRB-
10_1101-2021_02_08_430275	117	19	Figure	Figure	NNP
10_1101-2021_02_08_430275	117	20	2c	2c	NN
10_1101-2021_02_08_430275	117	21	)	)	-RRB-
10_1101-2021_02_08_430275	117	22	were	be	VBD
10_1101-2021_02_08_430275	117	23	very	very	RB
10_1101-2021_02_08_430275	117	24	similar	similar	JJ
10_1101-2021_02_08_430275	117	25	to	to	IN
10_1101-2021_02_08_430275	117	26	that	that	DT
10_1101-2021_02_08_430275	117	27	in	in	IN
10_1101-2021_02_08_430275	117	28	Figure	Figure	NNP
10_1101-2021_02_08_430275	117	29	1c	1c	CD
10_1101-2021_02_08_430275	117	30	,	,	,
10_1101-2021_02_08_430275	117	31	299	299	CD
10_1101-2021_02_08_430275	117	32	but	but	CC
10_1101-2021_02_08_430275	117	33	the	the	DT
10_1101-2021_02_08_430275	117	34	G	g	NN
10_1101-2021_02_08_430275	117	35	-	-	HYPH
10_1101-2021_02_08_430275	117	36	statistic	statistic	NN
10_1101-2021_02_08_430275	117	37	values	value	NNS
10_1101-2021_02_08_430275	117	38	were	be	VBD
10_1101-2021_02_08_430275	117	39	significantly	significantly	RB
10_1101-2021_02_08_430275	117	40	lower	low	JJR
10_1101-2021_02_08_430275	117	41	than	than	IN
10_1101-2021_02_08_430275	117	42	those	those	DT
10_1101-2021_02_08_430275	117	43	300	300	CD
10_1101-2021_02_08_430275	117	44	in	in	IN
10_1101-2021_02_08_430275	117	45	Figure	Figure	NNP
10_1101-2021_02_08_430275	117	46	1c	1c	NNP
10_1101-2021_02_08_430275	117	47	,	,	,
10_1101-2021_02_08_430275	117	48	and	and	CC
10_1101-2021_02_08_430275	117	49	the	the	DT
10_1101-2021_02_08_430275	117	50	threshold	threshold	NN
10_1101-2021_02_08_430275	117	51	did	do	VBD
10_1101-2021_02_08_430275	117	52	not	not	RB
10_1101-2021_02_08_430275	117	53	change	change	VB
10_1101-2021_02_08_430275	117	54	much	much	JJ
10_1101-2021_02_08_430275	117	55	.	.	.
10_1101-2021_02_08_430275	118	1	Only	only	RB
10_1101-2021_02_08_430275	118	2	301	301	CD
10_1101-2021_02_08_430275	118	3	a	a	DT
10_1101-2021_02_08_430275	118	4	single	single	JJ
10_1101-2021_02_08_430275	118	5	sliding	slide	VBG
10_1101-2021_02_08_430275	118	6	window	window	NN
10_1101-2021_02_08_430275	118	7	was	be	VBD
10_1101-2021_02_08_430275	118	8	above	above	IN
10_1101-2021_02_08_430275	118	9	the	the	DT
10_1101-2021_02_08_430275	118	10	threshold	threshold	NN
10_1101-2021_02_08_430275	118	11	(	(	-LRB-
10_1101-2021_02_08_430275	118	12	8.8953	8.8953	CD
10_1101-2021_02_08_430275	118	13	)	)	-RRB-
10_1101-2021_02_08_430275	118	14	,	,	,
10_1101-2021_02_08_430275	118	15	its	-PRON-	PRP$
10_1101-2021_02_08_430275	118	16	302	302	CD
10_1101-2021_02_08_430275	118	17	position	position	NN
10_1101-2021_02_08_430275	118	18	was	be	VBD
10_1101-2021_02_08_430275	118	19	at	at	IN
10_1101-2021_02_08_430275	118	20	29.96	29.96	CD
10_1101-2021_02_08_430275	118	21	Mb	Mb	NNP
10_1101-2021_02_08_430275	118	22	,	,	,
10_1101-2021_02_08_430275	118	23	and	and	CC
10_1101-2021_02_08_430275	118	24	its	-PRON-	PRP$
10_1101-2021_02_08_430275	118	25	G	g	NN
10_1101-2021_02_08_430275	118	26	-	-	HYPH
10_1101-2021_02_08_430275	118	27	statistic	statistic	NN
10_1101-2021_02_08_430275	118	28	value	value	NN
10_1101-2021_02_08_430275	118	29	was	be	VBD
10_1101-2021_02_08_430275	118	30	8.9060	8.9060	CD
10_1101-2021_02_08_430275	118	31	.	.	.
10_1101-2021_02_08_430275	119	1	303	303	CD
10_1101-2021_02_08_430275	119	2	The	the	DT
10_1101-2021_02_08_430275	119	3	allele	allele	NN
10_1101-2021_02_08_430275	119	4	frequency	frequency	NN
10_1101-2021_02_08_430275	119	5	method	method	NN
10_1101-2021_02_08_430275	119	6	:	:	:
10_1101-2021_02_08_430275	119	7	Without	without	IN
10_1101-2021_02_08_430275	119	8	the	the	DT
10_1101-2021_02_08_430275	119	9	aid	aid	NN
10_1101-2021_02_08_430275	119	10	of	of	IN
10_1101-2021_02_08_430275	119	11	the	the	DT
10_1101-2021_02_08_430275	119	12	304	304	CD
10_1101-2021_02_08_430275	119	13	parental	parental	JJ
10_1101-2021_02_08_430275	119	14	genome	genome	NN
10_1101-2021_02_08_430275	119	15	sequences	sequence	NNS
10_1101-2021_02_08_430275	119	16	,	,	,
10_1101-2021_02_08_430275	119	17	the	the	DT
10_1101-2021_02_08_430275	119	18	pattern	pattern	NN
10_1101-2021_02_08_430275	119	19	of	of	IN
10_1101-2021_02_08_430275	119	20	the	the	DT
10_1101-2021_02_08_430275	119	21	ΔAF	δaf	NN
10_1101-2021_02_08_430275	119	22	curve	curve	NN
10_1101-2021_02_08_430275	119	23	305	305	CD
10_1101-2021_02_08_430275	119	24	of	of	IN
10_1101-2021_02_08_430275	119	25	chromosome	chromosome	NN
10_1101-2021_02_08_430275	119	26	11	11	CD
10_1101-2021_02_08_430275	119	27	(	(	-LRB-
10_1101-2021_02_08_430275	119	28	Figure	Figure	NNP
10_1101-2021_02_08_430275	119	29	2d	2d	NNP
10_1101-2021_02_08_430275	119	30	)	)	-RRB-
10_1101-2021_02_08_430275	119	31	,	,	,
10_1101-2021_02_08_430275	119	32	especially	especially	RB
10_1101-2021_02_08_430275	119	33	the	the	DT
10_1101-2021_02_08_430275	119	34	genomic	genomic	JJ
10_1101-2021_02_08_430275	119	35	region	region	NN
10_1101-2021_02_08_430275	119	36	306	306	CD
10_1101-2021_02_08_430275	119	37	associated	associate	VBN
10_1101-2021_02_08_430275	119	38	with	with	IN
10_1101-2021_02_08_430275	119	39	the	the	DT
10_1101-2021_02_08_430275	119	40	trait	trait	NN
10_1101-2021_02_08_430275	119	41	,	,	,
10_1101-2021_02_08_430275	119	42	was	be	VBD
10_1101-2021_02_08_430275	119	43	drastically	drastically	RB
10_1101-2021_02_08_430275	119	44	different	different	JJ
10_1101-2021_02_08_430275	119	45	from	from	IN
10_1101-2021_02_08_430275	119	46	that	that	DT
10_1101-2021_02_08_430275	119	47	in	in	IN
10_1101-2021_02_08_430275	119	48	307	307	CD
10_1101-2021_02_08_430275	119	49	Figure	Figure	NNP
10_1101-2021_02_08_430275	119	50	1d	1d	NN
10_1101-2021_02_08_430275	119	51	.	.	.
10_1101-2021_02_08_430275	120	1	Differences	difference	NNS
10_1101-2021_02_08_430275	120	2	in	in	IN
10_1101-2021_02_08_430275	120	3	the	the	DT
10_1101-2021_02_08_430275	120	4	curve	curve	NN
10_1101-2021_02_08_430275	120	5	patterns	pattern	NNS
10_1101-2021_02_08_430275	120	6	were	be	VBD
10_1101-2021_02_08_430275	120	7	observed	observe	VBN
10_1101-2021_02_08_430275	120	8	in	in	IN
10_1101-2021_02_08_430275	120	9	308	308	CD
10_1101-2021_02_08_430275	120	10	other	other	JJ
10_1101-2021_02_08_430275	120	11	chromosomes	chromosome	NNS
10_1101-2021_02_08_430275	120	12	as	as	RB
10_1101-2021_02_08_430275	120	13	well	well	RB
10_1101-2021_02_08_430275	120	14	,	,	,
10_1101-2021_02_08_430275	120	15	but	but	CC
10_1101-2021_02_08_430275	120	16	they	-PRON-	PRP
10_1101-2021_02_08_430275	120	17	were	be	VBD
10_1101-2021_02_08_430275	120	18	relatively	relatively	RB
10_1101-2021_02_08_430275	120	19	minor	minor	JJ
10_1101-2021_02_08_430275	120	20	.	.	.
10_1101-2021_02_08_430275	121	1	All	all	DT
10_1101-2021_02_08_430275	121	2	309	309	CD
10_1101-2021_02_08_430275	121	3	ΔAF	δaf	NN
10_1101-2021_02_08_430275	121	4	values	value	NNS
10_1101-2021_02_08_430275	121	5	were	be	VBD
10_1101-2021_02_08_430275	121	6	within	within	IN
10_1101-2021_02_08_430275	121	7	the	the	DT
10_1101-2021_02_08_430275	121	8	99	99	CD
10_1101-2021_02_08_430275	121	9	%	%	NN
10_1101-2021_02_08_430275	121	10	confidence	confidence	NN
10_1101-2021_02_08_430275	121	11	interval	interval	NN
10_1101-2021_02_08_430275	121	12	,	,	,
10_1101-2021_02_08_430275	121	13	although	although	IN
10_1101-2021_02_08_430275	121	14	310	310	CD
10_1101-2021_02_08_430275	121	15	Zhang	Zhang	NNP
10_1101-2021_02_08_430275	121	16	et	et	NNP
10_1101-2021_02_08_430275	121	17	al	al	NNP
10_1101-2021_02_08_430275	121	18	.	.	.
10_1101-2021_02_08_430275	122	1	bioRχiv	bioRχiv	NNP
10_1101-2021_02_08_430275	122	2	|	|	NNP
10_1101-2021_02_08_430275	122	3	November	November	NNP
10_1101-2021_02_08_430275	122	4	24	24	CD
10_1101-2021_02_08_430275	122	5	,	,	,
10_1101-2021_02_08_430275	122	6	2020	2020	CD
10_1101-2021_02_08_430275	122	7	|	|	SYM
10_1101-2021_02_08_430275	122	8	3	3	CD
10_1101-2021_02_08_430275	122	9	.CC	.CC	:
10_1101-2021_02_08_430275	122	10	-	-	HYPH
10_1101-2021_02_08_430275	122	11	BY	by	IN
10_1101-2021_02_08_430275	122	12	-	-	HYPH
10_1101-2021_02_08_430275	122	13	NC	NC	NNP
10_1101-2021_02_08_430275	122	14	-	-	HYPH
10_1101-2021_02_08_430275	122	15	ND	ND	NNP
10_1101-2021_02_08_430275	122	16	4.0	4.0	CD
10_1101-2021_02_08_430275	122	17	International	International	NNP
10_1101-2021_02_08_430275	122	18	licenseavailable	licenseavailable	NN
10_1101-2021_02_08_430275	122	19	under	under	IN
10_1101-2021_02_08_430275	122	20	a	a	DT
10_1101-2021_02_08_430275	122	21	(	(	-LRB-
10_1101-2021_02_08_430275	122	22	which	which	WDT
10_1101-2021_02_08_430275	122	23	was	be	VBD
10_1101-2021_02_08_430275	122	24	not	not	RB
10_1101-2021_02_08_430275	122	25	certified	certify	VBN
10_1101-2021_02_08_430275	122	26	by	by	IN
10_1101-2021_02_08_430275	122	27	peer	peer	NN
10_1101-2021_02_08_430275	122	28	review	review	NN
10_1101-2021_02_08_430275	122	29	)	)	-RRB-
10_1101-2021_02_08_430275	122	30	is	be	VBZ
10_1101-2021_02_08_430275	122	31	the	the	DT
10_1101-2021_02_08_430275	122	32	author	author	NN
10_1101-2021_02_08_430275	122	33	/	/	SYM
10_1101-2021_02_08_430275	122	34	funder	funder	NN
10_1101-2021_02_08_430275	122	35	,	,	,
10_1101-2021_02_08_430275	122	36	who	who	WP
10_1101-2021_02_08_430275	122	37	has	have	VBZ
10_1101-2021_02_08_430275	122	38	granted	grant	VBN
10_1101-2021_02_08_430275	122	39	bioRxiv	biorxiv	IN
10_1101-2021_02_08_430275	122	40	a	a	DT
10_1101-2021_02_08_430275	122	41	license	license	NN
10_1101-2021_02_08_430275	122	42	to	to	TO
10_1101-2021_02_08_430275	122	43	display	display	VB
10_1101-2021_02_08_430275	122	44	the	the	DT
10_1101-2021_02_08_430275	122	45	preprint	preprint	NN
10_1101-2021_02_08_430275	122	46	in	in	IN
10_1101-2021_02_08_430275	122	47	perpetuity	perpetuity	NN
10_1101-2021_02_08_430275	122	48	.	.	.
10_1101-2021_02_08_430275	123	1	It	-PRON-	PRP
10_1101-2021_02_08_430275	123	2	is	be	VBZ
10_1101-2021_02_08_430275	123	3	made	make	VBN
10_1101-2021_02_08_430275	123	4	The	the	DT
10_1101-2021_02_08_430275	123	5	copyright	copyright	NN
10_1101-2021_02_08_430275	123	6	holder	holder	NN
10_1101-2021_02_08_430275	123	7	for	for	IN
10_1101-2021_02_08_430275	123	8	this	this	DT
10_1101-2021_02_08_430275	123	9	preprintthis	preprintthis	NN
10_1101-2021_02_08_430275	123	10	version	version	NN
10_1101-2021_02_08_430275	123	11	posted	post	VBD
10_1101-2021_02_08_430275	123	12	February	February	NNP
10_1101-2021_02_08_430275	123	13	10	10	CD
10_1101-2021_02_08_430275	123	14	,	,	,
10_1101-2021_02_08_430275	123	15	2021	2021	CD
10_1101-2021_02_08_430275	123	16	.	.	.
10_1101-2021_02_08_430275	123	17	;	;	:
10_1101-2021_02_08_430275	123	18	https://doi.org/10.1101/2021.02.08.430275doi	https://doi.org/10.1101/2021.02.08.430275doi	ADD
10_1101-2021_02_08_430275	123	19	:	:	:
10_1101-2021_02_08_430275	123	20	bioRxiv	biorxiv	IN
10_1101-2021_02_08_430275	123	21	preprint	preprint	NN
10_1101-2021_02_08_430275	123	22	https://github.com/dblhlx/PyBSASeq/blob/master/PyBSASeq_WP.py	https://github.com/dblhlx/pybsaseq/blob/master/pybsaseq_wp.py	ADD
10_1101-2021_02_08_430275	123	23	https://gatk.broadinstitute.org/hc/en-us/articles/360035535932-Germline-short-variant-discovery-SNPs-Indels-	https://gatk.broadinstitute.org/hc/en-us/articles/360035535932-Germline-short-variant-discovery-SNPs-Indels-	NNPS
10_1101-2021_02_08_430275	123	24	https://gatk.broadinstitute.org/hc/en-us/articles/360035535932-Germline-short-variant-discovery-SNPs-Indels-	https://gatk.broadinstitute.org/hc/en-us/articles/360035535932-Germline-short-variant-discovery-SNPs-Indels-	NNPS
10_1101-2021_02_08_430275	123	25	https://gatk.broadinstitute.org/hc/en-us/articles/360035535932-Germline-short-variant-discovery-SNPs-Indels-	https://gatk.broadinstitute.org/hc/en-us/articles/360035535932-Germline-short-variant-discovery-SNPs-Indels-	NNPS
10_1101-2021_02_08_430275	123	26	https://github.com/dblhlx/PyBSASeq/blob/master/PyBSASeq.py	https://github.com/dblhlx/pybsaseq/blob/master/pybsaseq.py	FW
10_1101-2021_02_08_430275	123	27	https://doi.org/10.1101/2021.02.08.430275	https://doi.org/10.1101/2021.02.08.430275	NNP
10_1101-2021_02_08_430275	123	28	http://creativecommons.org/licenses/by-nc-nd/4.0/	http://creativecommons.org/licenses/by-nc-nd/4.0/	NNP
10_1101-2021_02_08_430275	123	29	DR	DR	NNP
10_1101-2021_02_08_430275	123	30	AF	AF	NNP
10_1101-2021_02_08_430275	123	31	T	t	NN
10_1101-2021_02_08_430275	123	32	0	0	CD
10_1101-2021_02_08_430275	123	33	2000	2000	CD
10_1101-2021_02_08_430275	123	34	4000	4000	CD
10_1101-2021_02_08_430275	123	35	6000	6000	CD
10_1101-2021_02_08_430275	123	36	8000	8000	CD
10_1101-2021_02_08_430275	123	37	10000	10000	CD
10_1101-2021_02_08_430275	123	38	N	n	CD
10_1101-2021_02_08_430275	123	39	um	um	UH
10_1101-2021_02_08_430275	123	40	be	be	VB
10_1101-2021_02_08_430275	123	41	r	r	NN
10_1101-2021_02_08_430275	123	42	o	o	NN
10_1101-2021_02_08_430275	123	43	f	f	NN
10_1101-2021_02_08_430275	123	44	S	s	NN
10_1101-2021_02_08_430275	123	45	N	N	NNP
10_1101-2021_02_08_430275	123	46	P	P	NNP
10_1101-2021_02_08_430275	123	47	s	s	NN
10_1101-2021_02_08_430275	123	48	Chr1	Chr1	NNPS
10_1101-2021_02_08_430275	123	49	Chr2	Chr2	NNP
10_1101-2021_02_08_430275	123	50	Chr3	chr3	NN
10_1101-2021_02_08_430275	123	51	Chr4	chr4	NN
10_1101-2021_02_08_430275	123	52	Chr5	Chr5	VBZ
10_1101-2021_02_08_430275	123	53	Chr6	Chr6	NNP
10_1101-2021_02_08_430275	123	54	Chr7	Chr7	NNP
10_1101-2021_02_08_430275	123	55	Chr8	Chr8	NNP
10_1101-2021_02_08_430275	123	56	Chr9	Chr9	NNP
10_1101-2021_02_08_430275	123	57	Chr10	Chr10	NNP
10_1101-2021_02_08_430275	123	58	Chr11	Chr11	NNP
10_1101-2021_02_08_430275	123	59	Chr12	Chr12	NNP
10_1101-2021_02_08_430275	123	60	0.0	0.0	CD
10_1101-2021_02_08_430275	123	61	0.2	0.2	CD
10_1101-2021_02_08_430275	123	62	0.4	0.4	CD
10_1101-2021_02_08_430275	123	63	0.6	0.6	CD
10_1101-2021_02_08_430275	123	64	sS	ss	NN
10_1101-2021_02_08_430275	123	65	N	N	NNP
10_1101-2021_02_08_430275	123	66	P	P	NNP
10_1101-2021_02_08_430275	123	67	/to	/to	:
10_1101-2021_02_08_430275	123	68	ta	ta	ADD
10_1101-2021_02_08_430275	123	69	lS	lS	NNP
10_1101-2021_02_08_430275	123	70	N	n	CC
10_1101-2021_02_08_430275	123	71	P	P	NNP
10_1101-2021_02_08_430275	123	72	0	0	CD
10_1101-2021_02_08_430275	123	73	5	5	CD
10_1101-2021_02_08_430275	123	74	10	10	CD
10_1101-2021_02_08_430275	123	75	G	g	NN
10_1101-2021_02_08_430275	123	76	-s	-s	:
10_1101-2021_02_08_430275	123	77	ta	ta	NNP
10_1101-2021_02_08_430275	123	78	tis	tis	NNP
10_1101-2021_02_08_430275	123	79	tic	tic	NNP
10_1101-2021_02_08_430275	123	80	0	0	CD
10_1101-2021_02_08_430275	123	81	1	1	CD
10_1101-2021_02_08_430275	123	82	2	2	CD
10_1101-2021_02_08_430275	123	83	3	3	CD
10_1101-2021_02_08_430275	123	84	4	4	CD
10_1101-2021_02_08_430275	123	85	0.5	0.5	CD
10_1101-2021_02_08_430275	123	86	0.0	0.0	CD
10_1101-2021_02_08_430275	123	87	0.5	0.5	CD
10_1101-2021_02_08_430275	123	88	A	a	NN
10_1101-2021_02_08_430275	123	89	F	f	NN
10_1101-2021_02_08_430275	123	90	0	0	CD
10_1101-2021_02_08_430275	123	91	1	1	CD
10_1101-2021_02_08_430275	123	92	2	2	CD
10_1101-2021_02_08_430275	123	93	3	3	CD
10_1101-2021_02_08_430275	123	94	0	0	CD
10_1101-2021_02_08_430275	123	95	1	1	CD
10_1101-2021_02_08_430275	123	96	2	2	CD
10_1101-2021_02_08_430275	123	97	3	3	CD
10_1101-2021_02_08_430275	123	98	0	0	CD
10_1101-2021_02_08_430275	123	99	1	1	CD
10_1101-2021_02_08_430275	123	100	2	2	CD
10_1101-2021_02_08_430275	123	101	3	3	CD
10_1101-2021_02_08_430275	123	102	0	0	CD
10_1101-2021_02_08_430275	123	103	1	1	CD
10_1101-2021_02_08_430275	123	104	2	2	CD
10_1101-2021_02_08_430275	123	105	0	0	CD
10_1101-2021_02_08_430275	123	106	1	1	CD
10_1101-2021_02_08_430275	123	107	2	2	CD
10_1101-2021_02_08_430275	123	108	0	0	CD
10_1101-2021_02_08_430275	123	109	1	1	CD
10_1101-2021_02_08_430275	123	110	2	2	CD
10_1101-2021_02_08_430275	123	111	0	0	CD
10_1101-2021_02_08_430275	123	112	1	1	CD
10_1101-2021_02_08_430275	123	113	2	2	CD
10_1101-2021_02_08_430275	123	114	0	0	CD
10_1101-2021_02_08_430275	123	115	1	1	CD
10_1101-2021_02_08_430275	123	116	2	2	CD
10_1101-2021_02_08_430275	123	117	0	0	CD
10_1101-2021_02_08_430275	123	118	1	1	CD
10_1101-2021_02_08_430275	123	119	2	2	CD
10_1101-2021_02_08_430275	123	120	0	0	CD
10_1101-2021_02_08_430275	123	121	1	1	CD
10_1101-2021_02_08_430275	123	122	2	2	CD
10_1101-2021_02_08_430275	123	123	0	0	CD
10_1101-2021_02_08_430275	123	124	1	1	CD
10_1101-2021_02_08_430275	123	125	2	2	CD
10_1101-2021_02_08_430275	123	126	Genomic	genomic	JJ
10_1101-2021_02_08_430275	123	127	position	position	NN
10_1101-2021_02_08_430275	123	128	(	(	-LRB-
10_1101-2021_02_08_430275	123	129	×10	×10	NFP
10_1101-2021_02_08_430275	123	130	Mb	mb	NN
10_1101-2021_02_08_430275	123	131	)	)	-RRB-
10_1101-2021_02_08_430275	123	132	A	A	NNP
10_1101-2021_02_08_430275	123	133	B	b	NN
10_1101-2021_02_08_430275	123	134	C	c	NN
10_1101-2021_02_08_430275	123	135	D	d	NN
10_1101-2021_02_08_430275	123	136	Figure	figure	NN
10_1101-2021_02_08_430275	123	137	1	1	CD
10_1101-2021_02_08_430275	123	138	.	.	.
10_1101-2021_02_08_430275	124	1	BSA	BSA	NNP
10_1101-2021_02_08_430275	124	2	-	-	HYPH
10_1101-2021_02_08_430275	124	3	Seq	seq	NN
10_1101-2021_02_08_430275	124	4	data	data	NN
10_1101-2021_02_08_430275	124	5	analysis	analysis	NN
10_1101-2021_02_08_430275	124	6	using	use	VBG
10_1101-2021_02_08_430275	124	7	the	the	DT
10_1101-2021_02_08_430275	124	8	genome	genome	JJ
10_1101-2021_02_08_430275	124	9	sequences	sequence	NNS
10_1101-2021_02_08_430275	124	10	of	of	IN
10_1101-2021_02_08_430275	124	11	both	both	PDT
10_1101-2021_02_08_430275	124	12	the	the	DT
10_1101-2021_02_08_430275	124	13	parents	parent	NNS
10_1101-2021_02_08_430275	124	14	and	and	CC
10_1101-2021_02_08_430275	124	15	the	the	DT
10_1101-2021_02_08_430275	124	16	bulks	bulk	NNS
10_1101-2021_02_08_430275	124	17	.	.	.
10_1101-2021_02_08_430275	125	1	The	the	DT
10_1101-2021_02_08_430275	125	2	red	red	JJ
10_1101-2021_02_08_430275	125	3	lines	line	NNS
10_1101-2021_02_08_430275	125	4	/	/	SYM
10_1101-2021_02_08_430275	125	5	curves	curve	NNS
10_1101-2021_02_08_430275	125	6	are	be	VBP
10_1101-2021_02_08_430275	125	7	the	the	DT
10_1101-2021_02_08_430275	125	8	thresholds	threshold	NNS
10_1101-2021_02_08_430275	125	9	.	.	.
10_1101-2021_02_08_430275	126	1	(	(	-LRB-
10_1101-2021_02_08_430275	126	2	A	a	DT
10_1101-2021_02_08_430275	126	3	)	)	-RRB-
10_1101-2021_02_08_430275	126	4	Genomic	genomic	JJ
10_1101-2021_02_08_430275	126	5	distributions	distribution	NNS
10_1101-2021_02_08_430275	126	6	of	of	IN
10_1101-2021_02_08_430275	126	7	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	126	8	(	(	-LRB-
10_1101-2021_02_08_430275	126	9	blue	blue	NNP
10_1101-2021_02_08_430275	126	10	)	)	-RRB-
10_1101-2021_02_08_430275	126	11	and	and	CC
10_1101-2021_02_08_430275	126	12	totalSNPs	totalsnps	RB
10_1101-2021_02_08_430275	126	13	(	(	-LRB-
10_1101-2021_02_08_430275	126	14	black	black	JJ
10_1101-2021_02_08_430275	126	15	)	)	-RRB-
10_1101-2021_02_08_430275	126	16	.	.	.
10_1101-2021_02_08_430275	127	1	(	(	-LRB-
10_1101-2021_02_08_430275	127	2	B	b	NN
10_1101-2021_02_08_430275	127	3	)	)	-RRB-
10_1101-2021_02_08_430275	127	4	Genomic	genomic	JJ
10_1101-2021_02_08_430275	127	5	distributions	distribution	NNS
10_1101-2021_02_08_430275	127	6	of	of	IN
10_1101-2021_02_08_430275	127	7	sSNP	ssnp	NN
10_1101-2021_02_08_430275	127	8	/	/	SYM
10_1101-2021_02_08_430275	127	9	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	127	10	ratios	ratio	NNS
10_1101-2021_02_08_430275	127	11	.	.	.
10_1101-2021_02_08_430275	128	1	(	(	-LRB-
10_1101-2021_02_08_430275	128	2	C	C	NNP
10_1101-2021_02_08_430275	128	3	)	)	-RRB-
10_1101-2021_02_08_430275	128	4	Genomic	genomic	JJ
10_1101-2021_02_08_430275	128	5	distributions	distribution	NNS
10_1101-2021_02_08_430275	128	6	of	of	IN
10_1101-2021_02_08_430275	128	7	G	g	NN
10_1101-2021_02_08_430275	128	8	-	-	HYPH
10_1101-2021_02_08_430275	128	9	statistic	statistic	NN
10_1101-2021_02_08_430275	128	10	values	value	NNS
10_1101-2021_02_08_430275	128	11	.	.	.
10_1101-2021_02_08_430275	129	1	(	(	-LRB-
10_1101-2021_02_08_430275	129	2	D	d	NN
10_1101-2021_02_08_430275	129	3	)	)	-RRB-
10_1101-2021_02_08_430275	129	4	Genomic	genomic	JJ
10_1101-2021_02_08_430275	129	5	distributions	distribution	NNS
10_1101-2021_02_08_430275	129	6	of	of	IN
10_1101-2021_02_08_430275	129	7	ΔAF	δaf	NN
10_1101-2021_02_08_430275	129	8	values	value	NNS
10_1101-2021_02_08_430275	129	9	.	.	.
10_1101-2021_02_08_430275	130	1	Table	table	NN
10_1101-2021_02_08_430275	130	2	2	2	CD
10_1101-2021_02_08_430275	130	3	.	.	.
10_1101-2021_02_08_430275	131	1	Chromosomal	chromosomal	JJ
10_1101-2021_02_08_430275	131	2	distribution	distribution	NN
10_1101-2021_02_08_430275	131	3	of	of	IN
10_1101-2021_02_08_430275	131	4	SNPs	snp	NNS
10_1101-2021_02_08_430275	131	5	-	-	:
10_1101-2021_02_08_430275	131	6	using	use	VBG
10_1101-2021_02_08_430275	131	7	only	only	RB
10_1101-2021_02_08_430275	131	8	the	the	DT
10_1101-2021_02_08_430275	131	9	bulk	bulk	JJ
10_1101-2021_02_08_430275	131	10	genome	genome	NN
10_1101-2021_02_08_430275	131	11	sequences	sequence	NNS
10_1101-2021_02_08_430275	131	12	Chromosome	Chromosome	NNP
10_1101-2021_02_08_430275	131	13	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	131	14	TotalSNPs	totalsnps	RB
10_1101-2021_02_08_430275	131	15	sSNP	ssnp	NN
10_1101-2021_02_08_430275	131	16	/	/	SYM
10_1101-2021_02_08_430275	131	17	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	131	18	1	1	CD
10_1101-2021_02_08_430275	131	19	1335	1335	CD
10_1101-2021_02_08_430275	131	20	163	163	CD
10_1101-2021_02_08_430275	131	21	260	260	CD
10_1101-2021_02_08_430275	131	22	0.0082	0.0082	CD
10_1101-2021_02_08_430275	131	23	2	2	CD
10_1101-2021_02_08_430275	131	24	391	391	CD
10_1101-2021_02_08_430275	131	25	146	146	CD
10_1101-2021_02_08_430275	131	26	877	877	CD
10_1101-2021_02_08_430275	131	27	0.0027	0.0027	CD
10_1101-2021_02_08_430275	131	28	3	3	CD
10_1101-2021_02_08_430275	131	29	578	578	CD
10_1101-2021_02_08_430275	131	30	120	120	CD
10_1101-2021_02_08_430275	131	31	319	319	CD
10_1101-2021_02_08_430275	131	32	0.0048	0.0048	CD
10_1101-2021_02_08_430275	131	33	4	4	CD
10_1101-2021_02_08_430275	131	34	442	442	CD
10_1101-2021_02_08_430275	131	35	110	110	CD
10_1101-2021_02_08_430275	131	36	952	952	CD
10_1101-2021_02_08_430275	131	37	0.0040	0.0040	CD
10_1101-2021_02_08_430275	131	38	5	5	CD
10_1101-2021_02_08_430275	131	39	481	481	CD
10_1101-2021_02_08_430275	131	40	103	103	CD
10_1101-2021_02_08_430275	131	41	362	362	CD
10_1101-2021_02_08_430275	131	42	0.0047	0.0047	CD
10_1101-2021_02_08_430275	131	43	6	6	CD
10_1101-2021_02_08_430275	131	44	1724	1724	CD
10_1101-2021_02_08_430275	131	45	103	103	CD
10_1101-2021_02_08_430275	131	46	416	416	CD
10_1101-2021_02_08_430275	131	47	0.0167	0.0167	CD
10_1101-2021_02_08_430275	131	48	7	7	CD
10_1101-2021_02_08_430275	131	49	459	459	CD
10_1101-2021_02_08_430275	131	50	114	114	CD
10_1101-2021_02_08_430275	131	51	564	564	CD
10_1101-2021_02_08_430275	131	52	0.0040	0.0040	CD
10_1101-2021_02_08_430275	131	53	8	8	CD
10_1101-2021_02_08_430275	131	54	373	373	CD
10_1101-2021_02_08_430275	131	55	103	103	CD
10_1101-2021_02_08_430275	131	56	385	385	CD
10_1101-2021_02_08_430275	131	57	0.0036	0.0036	CD
10_1101-2021_02_08_430275	131	58	9	9	CD
10_1101-2021_02_08_430275	131	59	1410	1410	CD
10_1101-2021_02_08_430275	131	60	82	82	CD
10_1101-2021_02_08_430275	131	61	744	744	CD
10_1101-2021_02_08_430275	131	62	0.0170	0.0170	CD
10_1101-2021_02_08_430275	131	63	10	10	CD
10_1101-2021_02_08_430275	131	64	572	572	CD
10_1101-2021_02_08_430275	131	65	78	78	CD
10_1101-2021_02_08_430275	131	66	206	206	CD
10_1101-2021_02_08_430275	131	67	0.0073	0.0073	CD
10_1101-2021_02_08_430275	131	68	11	11	CD
10_1101-2021_02_08_430275	131	69	3120	3120	CD
10_1101-2021_02_08_430275	131	70	112	112	CD
10_1101-2021_02_08_430275	131	71	719	719	CD
10_1101-2021_02_08_430275	131	72	0.0277	0.0277	CD
10_1101-2021_02_08_430275	131	73	12	12	CD
10_1101-2021_02_08_430275	131	74	281	281	CD
10_1101-2021_02_08_430275	131	75	106	106	CD
10_1101-2021_02_08_430275	131	76	381	381	CD
10_1101-2021_02_08_430275	131	77	0.0026	0.0026	CD
10_1101-2021_02_08_430275	131	78	Genome	Genome	NNP
10_1101-2021_02_08_430275	131	79	-	-	HYPH
10_1101-2021_02_08_430275	131	80	wide	wide	JJ
10_1101-2021_02_08_430275	131	81	11	11	CD
10_1101-2021_02_08_430275	131	82	166	166	CD
10_1101-2021_02_08_430275	131	83	1	1	CD
10_1101-2021_02_08_430275	131	84	346	346	CD
10_1101-2021_02_08_430275	131	85	185	185	CD
10_1101-2021_02_08_430275	131	86	0.0083	0.0083	CD
10_1101-2021_02_08_430275	131	87	AD	ad	NN
10_1101-2021_02_08_430275	131	88	swapping	swapping	NN
10_1101-2021_02_08_430275	131	89	was	be	VBD
10_1101-2021_02_08_430275	131	90	performed	perform	VBN
10_1101-2021_02_08_430275	131	91	on	on	IN
10_1101-2021_02_08_430275	131	92	only	only	RB
10_1101-2021_02_08_430275	131	93	67	67	CD
10_1101-2021_02_08_430275	131	94	396	396	CD
10_1101-2021_02_08_430275	131	95	SNPs	snp	NNS
10_1101-2021_02_08_430275	131	96	,	,	,
10_1101-2021_02_08_430275	131	97	6.1	6.1	CD
10_1101-2021_02_08_430275	131	98	%	%	NN
10_1101-2021_02_08_430275	131	99	of	of	IN
10_1101-2021_02_08_430275	131	100	311	311	CD
10_1101-2021_02_08_430275	131	101	total	total	JJ
10_1101-2021_02_08_430275	131	102	SNPs	snp	NNS
10_1101-2021_02_08_430275	131	103	.	.	.
10_1101-2021_02_08_430275	132	1	312	312	CD
10_1101-2021_02_08_430275	132	2	Discussion	discussion	NN
10_1101-2021_02_08_430275	132	3	313	313	CD
10_1101-2021_02_08_430275	132	4	We	-PRON-	PRP
10_1101-2021_02_08_430275	132	5	tested	test	VBD
10_1101-2021_02_08_430275	132	6	how	how	WRB
10_1101-2021_02_08_430275	132	7	parental	parental	JJ
10_1101-2021_02_08_430275	132	8	genome	genome	JJ
10_1101-2021_02_08_430275	132	9	sequences	sequence	NNS
10_1101-2021_02_08_430275	132	10	affected	affect	VBD
10_1101-2021_02_08_430275	132	11	the	the	DT
10_1101-2021_02_08_430275	132	12	detec-	detec-	NN
10_1101-2021_02_08_430275	132	13	314	314	CD
10_1101-2021_02_08_430275	132	14	tion	tion	NN
10_1101-2021_02_08_430275	132	15	of	of	IN
10_1101-2021_02_08_430275	132	16	SNP	SNP	NNP
10_1101-2021_02_08_430275	132	17	-	-	HYPH
10_1101-2021_02_08_430275	132	18	trait	trait	NN
10_1101-2021_02_08_430275	132	19	associations	association	NNS
10_1101-2021_02_08_430275	132	20	via	via	IN
10_1101-2021_02_08_430275	132	21	BSA	BSA	NNP
10_1101-2021_02_08_430275	132	22	-	-	HYPH
10_1101-2021_02_08_430275	132	23	Seq	Seq	NNP
10_1101-2021_02_08_430275	132	24	using	use	VBG
10_1101-2021_02_08_430275	132	25	a	a	DT
10_1101-2021_02_08_430275	132	26	dataset	dataset	JJ
10_1101-2021_02_08_430275	132	27	315	315	CD
10_1101-2021_02_08_430275	132	28	of	of	IN
10_1101-2021_02_08_430275	132	29	the	the	DT
10_1101-2021_02_08_430275	132	30	rice	rice	NN
10_1101-2021_02_08_430275	132	31	root	root	NN
10_1101-2021_02_08_430275	132	32	-	-	HYPH
10_1101-2021_02_08_430275	132	33	knot	knot	NN
10_1101-2021_02_08_430275	132	34	nematode	nematode	NNP
10_1101-2021_02_08_430275	132	35	resistance	resistance	NNP
10_1101-2021_02_08_430275	132	36	.	.	.
10_1101-2021_02_08_430275	133	1	Using	use	VBG
10_1101-2021_02_08_430275	133	2	the	the	DT
10_1101-2021_02_08_430275	133	3	genome	genome	JJ
10_1101-2021_02_08_430275	133	4	316	316	CD
10_1101-2021_02_08_430275	133	5	sequences	sequence	NNS
10_1101-2021_02_08_430275	133	6	of	of	IN
10_1101-2021_02_08_430275	133	7	both	both	CC
10_1101-2021_02_08_430275	133	8	the	the	DT
10_1101-2021_02_08_430275	133	9	parents	parent	NNS
10_1101-2021_02_08_430275	133	10	and	and	CC
10_1101-2021_02_08_430275	133	11	bulks	bulk	NNS
10_1101-2021_02_08_430275	133	12	,	,	,
10_1101-2021_02_08_430275	133	13	a	a	DT
10_1101-2021_02_08_430275	133	14	major	major	JJ
10_1101-2021_02_08_430275	133	15	locus	locus	NN
10_1101-2021_02_08_430275	133	16	on	on	IN
10_1101-2021_02_08_430275	133	17	317	317	CD
10_1101-2021_02_08_430275	133	18	chromosome	chromosome	NN
10_1101-2021_02_08_430275	133	19	11	11	CD
10_1101-2021_02_08_430275	133	20	and	and	CC
10_1101-2021_02_08_430275	133	21	a	a	DT
10_1101-2021_02_08_430275	133	22	minor	minor	JJ
10_1101-2021_02_08_430275	133	23	locus	locus	NN
10_1101-2021_02_08_430275	133	24	on	on	IN
10_1101-2021_02_08_430275	133	25	chromosome	chromosome	NN
10_1101-2021_02_08_430275	133	26	9	9	CD
10_1101-2021_02_08_430275	133	27	were	be	VBD
10_1101-2021_02_08_430275	133	28	de-	de-	RB
10_1101-2021_02_08_430275	133	29	318	318	CD
10_1101-2021_02_08_430275	133	30	tected	tecte	VBN
10_1101-2021_02_08_430275	133	31	via	via	IN
10_1101-2021_02_08_430275	133	32	the	the	DT
10_1101-2021_02_08_430275	133	33	significant	significant	JJ
10_1101-2021_02_08_430275	133	34	structural	structural	JJ
10_1101-2021_02_08_430275	133	35	variant	variant	JJ
10_1101-2021_02_08_430275	133	36	method	method	NN
10_1101-2021_02_08_430275	133	37	.	.	.
10_1101-2021_02_08_430275	134	1	However	however	RB
10_1101-2021_02_08_430275	134	2	,	,	,
10_1101-2021_02_08_430275	134	3	319	319	CD
10_1101-2021_02_08_430275	134	4	only	only	RB
10_1101-2021_02_08_430275	134	5	the	the	DT
10_1101-2021_02_08_430275	134	6	major	major	JJ
10_1101-2021_02_08_430275	134	7	locus	locus	NN
10_1101-2021_02_08_430275	134	8	was	be	VBD
10_1101-2021_02_08_430275	134	9	detected	detect	VBN
10_1101-2021_02_08_430275	134	10	via	via	IN
10_1101-2021_02_08_430275	134	11	the	the	DT
10_1101-2021_02_08_430275	134	12	G	g	NN
10_1101-2021_02_08_430275	134	13	-	-	HYPH
10_1101-2021_02_08_430275	134	14	statistic	statistic	NN
10_1101-2021_02_08_430275	134	15	method	method	NN
10_1101-2021_02_08_430275	134	16	320	320	CD
10_1101-2021_02_08_430275	134	17	and	and	CC
10_1101-2021_02_08_430275	134	18	the	the	DT
10_1101-2021_02_08_430275	134	19	allele	allele	NNP
10_1101-2021_02_08_430275	134	20	frequency	frequency	NN
10_1101-2021_02_08_430275	134	21	method	method	NN
10_1101-2021_02_08_430275	134	22	.	.	.
10_1101-2021_02_08_430275	135	1	The	the	DT
10_1101-2021_02_08_430275	135	2	positions	position	NNS
10_1101-2021_02_08_430275	135	3	of	of	IN
10_1101-2021_02_08_430275	135	4	the	the	DT
10_1101-2021_02_08_430275	135	5	peaks	peak	NNS
10_1101-2021_02_08_430275	135	6	321	321	CD
10_1101-2021_02_08_430275	135	7	detected	detect	VBD
10_1101-2021_02_08_430275	135	8	via	via	IN
10_1101-2021_02_08_430275	135	9	different	different	JJ
10_1101-2021_02_08_430275	135	10	methods	method	NNS
10_1101-2021_02_08_430275	135	11	were	be	VBD
10_1101-2021_02_08_430275	135	12	not	not	RB
10_1101-2021_02_08_430275	135	13	the	the	DT
10_1101-2021_02_08_430275	135	14	same	same	JJ
10_1101-2021_02_08_430275	135	15	,	,	,
10_1101-2021_02_08_430275	135	16	but	but	CC
10_1101-2021_02_08_430275	135	17	they	-PRON-	PRP
10_1101-2021_02_08_430275	135	18	322	322	CD
10_1101-2021_02_08_430275	135	19	were	be	VBD
10_1101-2021_02_08_430275	135	20	very	very	RB
10_1101-2021_02_08_430275	135	21	close	close	JJ
10_1101-2021_02_08_430275	135	22	to	to	IN
10_1101-2021_02_08_430275	135	23	each	each	DT
10_1101-2021_02_08_430275	135	24	other	other	JJ
10_1101-2021_02_08_430275	135	25	.	.	.
10_1101-2021_02_08_430275	136	1	Using	use	VBG
10_1101-2021_02_08_430275	136	2	only	only	RB
10_1101-2021_02_08_430275	136	3	the	the	DT
10_1101-2021_02_08_430275	136	4	bulk	bulk	JJ
10_1101-2021_02_08_430275	136	5	genome	genome	NNP
10_1101-2021_02_08_430275	136	6	323	323	CD
10_1101-2021_02_08_430275	136	7	sequences	sequence	NNS
10_1101-2021_02_08_430275	136	8	,	,	,
10_1101-2021_02_08_430275	136	9	the	the	DT
10_1101-2021_02_08_430275	136	10	major	major	JJ
10_1101-2021_02_08_430275	136	11	locus	locus	NN
10_1101-2021_02_08_430275	136	12	can	can	MD
10_1101-2021_02_08_430275	136	13	be	be	VB
10_1101-2021_02_08_430275	136	14	detected	detect	VBN
10_1101-2021_02_08_430275	136	15	via	via	IN
10_1101-2021_02_08_430275	136	16	only	only	RB
10_1101-2021_02_08_430275	136	17	the	the	DT
10_1101-2021_02_08_430275	136	18	signif-	signif-	JJ
10_1101-2021_02_08_430275	136	19	324	324	CD
10_1101-2021_02_08_430275	136	20	icant	icant	NN
10_1101-2021_02_08_430275	136	21	structural	structural	JJ
10_1101-2021_02_08_430275	136	22	variant	variant	NN
10_1101-2021_02_08_430275	136	23	and	and	CC
10_1101-2021_02_08_430275	136	24	G	g	NN
10_1101-2021_02_08_430275	136	25	-	-	HYPH
10_1101-2021_02_08_430275	136	26	statistic	statistic	NN
10_1101-2021_02_08_430275	136	27	methods	method	NNS
10_1101-2021_02_08_430275	136	28	.	.	.
10_1101-2021_02_08_430275	137	1	The	the	DT
10_1101-2021_02_08_430275	137	2	allele	allele	JJ
10_1101-2021_02_08_430275	137	3	325	325	CD
10_1101-2021_02_08_430275	137	4	frequency	frequency	NN
10_1101-2021_02_08_430275	137	5	method	method	NN
10_1101-2021_02_08_430275	137	6	uses	use	VBZ
10_1101-2021_02_08_430275	137	7	the	the	DT
10_1101-2021_02_08_430275	137	8	ΔAF	δaf	NN
10_1101-2021_02_08_430275	137	9	value	value	NN
10_1101-2021_02_08_430275	137	10	of	of	IN
10_1101-2021_02_08_430275	137	11	a	a	DT
10_1101-2021_02_08_430275	137	12	SNP	SNP	NNP
10_1101-2021_02_08_430275	137	13	to	to	TO
10_1101-2021_02_08_430275	137	14	measure	measure	VB
10_1101-2021_02_08_430275	137	15	326	326	CD
10_1101-2021_02_08_430275	137	16	allele	allele	NNS
10_1101-2021_02_08_430275	137	17	(	(	-LRB-
10_1101-2021_02_08_430275	137	18	REF	REF	NNP
10_1101-2021_02_08_430275	137	19	/	/	SYM
10_1101-2021_02_08_430275	137	20	ALT	ALT	NNP
10_1101-2021_02_08_430275	137	21	)	)	-RRB-
10_1101-2021_02_08_430275	137	22	enrichment	enrichment	NN
10_1101-2021_02_08_430275	137	23	in	in	IN
10_1101-2021_02_08_430275	137	24	the	the	DT
10_1101-2021_02_08_430275	137	25	SNP	SNP	NNP
10_1101-2021_02_08_430275	137	26	locus	locus	NN
10_1101-2021_02_08_430275	137	27	,	,	,
10_1101-2021_02_08_430275	137	28	and	and	CC
10_1101-2021_02_08_430275	137	29	the	the	DT
10_1101-2021_02_08_430275	137	30	G-	G-	NNP
10_1101-2021_02_08_430275	137	31	327	327	CD
10_1101-2021_02_08_430275	137	32	statistic	statistic	NN
10_1101-2021_02_08_430275	137	33	method	method	NN
10_1101-2021_02_08_430275	137	34	uses	use	VBZ
10_1101-2021_02_08_430275	137	35	the	the	DT
10_1101-2021_02_08_430275	137	36	G	g	NN
10_1101-2021_02_08_430275	137	37	-	-	HYPH
10_1101-2021_02_08_430275	137	38	statistic	statistic	NN
10_1101-2021_02_08_430275	137	39	value	value	NN
10_1101-2021_02_08_430275	137	40	of	of	IN
10_1101-2021_02_08_430275	137	41	a	a	DT
10_1101-2021_02_08_430275	137	42	SNP	SNP	NNP
10_1101-2021_02_08_430275	137	43	to	to	TO
10_1101-2021_02_08_430275	137	44	measure	measure	VB
10_1101-2021_02_08_430275	137	45	328	328	CD
10_1101-2021_02_08_430275	137	46	the	the	DT
10_1101-2021_02_08_430275	137	47	allele	allele	NNP
10_1101-2021_02_08_430275	137	48	enrichment	enrichment	NN
10_1101-2021_02_08_430275	137	49	;	;	:
10_1101-2021_02_08_430275	137	50	ΔAF	ΔAF	NNP
10_1101-2021_02_08_430275	137	51	and	and	CC
10_1101-2021_02_08_430275	137	52	G	G	NNP
10_1101-2021_02_08_430275	137	53	-	-	HYPH
10_1101-2021_02_08_430275	137	54	statistic	statistic	NN
10_1101-2021_02_08_430275	137	55	are	be	VBP
10_1101-2021_02_08_430275	137	56	parameters	parameter	NNS
10_1101-2021_02_08_430275	137	57	329	329	CD
10_1101-2021_02_08_430275	137	58	at	at	IN
10_1101-2021_02_08_430275	137	59	the	the	DT
10_1101-2021_02_08_430275	137	60	SNP	SNP	NNP
10_1101-2021_02_08_430275	137	61	level	level	NN
10_1101-2021_02_08_430275	137	62	,	,	,
10_1101-2021_02_08_430275	137	63	therefore	therefore	RB
10_1101-2021_02_08_430275	137	64	,	,	,
10_1101-2021_02_08_430275	137	65	both	both	DT
10_1101-2021_02_08_430275	137	66	methods	method	NNS
10_1101-2021_02_08_430275	137	67	use	use	VBP
10_1101-2021_02_08_430275	137	68	a	a	DT
10_1101-2021_02_08_430275	137	69	SNP	SNP	NNP
10_1101-2021_02_08_430275	137	70	level	level	NN
10_1101-2021_02_08_430275	137	71	330	330	CD
10_1101-2021_02_08_430275	137	72	parameter	parameter	NN
10_1101-2021_02_08_430275	137	73	to	to	TO
10_1101-2021_02_08_430275	137	74	identify	identify	VB
10_1101-2021_02_08_430275	137	75	significant	significant	JJ
10_1101-2021_02_08_430275	137	76	sliding	slide	VBG
10_1101-2021_02_08_430275	137	77	windows	window	NNS
10_1101-2021_02_08_430275	137	78	for	for	IN
10_1101-2021_02_08_430275	137	79	the	the	DT
10_1101-2021_02_08_430275	137	80	detec-	detec-	JJ
10_1101-2021_02_08_430275	137	81	331	331	CD
10_1101-2021_02_08_430275	137	82	tion	tion	NN
10_1101-2021_02_08_430275	137	83	of	of	IN
10_1101-2021_02_08_430275	137	84	the	the	DT
10_1101-2021_02_08_430275	137	85	genomic	genomic	JJ
10_1101-2021_02_08_430275	137	86	region	region	NN
10_1101-2021_02_08_430275	137	87	-	-	HYPH
10_1101-2021_02_08_430275	137	88	trait	trait	NN
10_1101-2021_02_08_430275	137	89	associations	association	NNS
10_1101-2021_02_08_430275	137	90	.	.	.
10_1101-2021_02_08_430275	138	1	The	the	DT
10_1101-2021_02_08_430275	138	2	significant	significant	JJ
10_1101-2021_02_08_430275	138	3	332	332	CD
10_1101-2021_02_08_430275	138	4	structural	structural	JJ
10_1101-2021_02_08_430275	138	5	variant	variant	JJ
10_1101-2021_02_08_430275	138	6	method	method	NN
10_1101-2021_02_08_430275	138	7	,	,	,
10_1101-2021_02_08_430275	138	8	however	however	RB
10_1101-2021_02_08_430275	138	9	,	,	,
10_1101-2021_02_08_430275	138	10	uses	use	VBZ
10_1101-2021_02_08_430275	138	11	the	the	DT
10_1101-2021_02_08_430275	138	12	sSNP	ssnp	NN
10_1101-2021_02_08_430275	138	13	/	/	SYM
10_1101-2021_02_08_430275	138	14	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	138	15	333	333	CD
10_1101-2021_02_08_430275	138	16	ratio	ratio	NN
10_1101-2021_02_08_430275	138	17	,	,	,
10_1101-2021_02_08_430275	138	18	a	a	DT
10_1101-2021_02_08_430275	138	19	parameter	parameter	NN
10_1101-2021_02_08_430275	138	20	at	at	IN
10_1101-2021_02_08_430275	138	21	the	the	DT
10_1101-2021_02_08_430275	138	22	sliding	slide	VBG
10_1101-2021_02_08_430275	138	23	window	window	NN
10_1101-2021_02_08_430275	138	24	level	level	NN
10_1101-2021_02_08_430275	138	25	,	,	,
10_1101-2021_02_08_430275	138	26	to	to	TO
10_1101-2021_02_08_430275	138	27	measure	measure	VB
10_1101-2021_02_08_430275	138	28	the	the	DT
10_1101-2021_02_08_430275	138	29	334	334	CD
10_1101-2021_02_08_430275	138	30	sSNP	ssnp	NN
10_1101-2021_02_08_430275	138	31	enrichment	enrichment	NN
10_1101-2021_02_08_430275	138	32	in	in	IN
10_1101-2021_02_08_430275	138	33	a	a	DT
10_1101-2021_02_08_430275	138	34	sliding	slide	VBG
10_1101-2021_02_08_430275	138	35	window	window	NN
10_1101-2021_02_08_430275	138	36	for	for	IN
10_1101-2021_02_08_430275	138	37	the	the	DT
10_1101-2021_02_08_430275	138	38	identification	identification	NN
10_1101-2021_02_08_430275	138	39	of	of	IN
10_1101-2021_02_08_430275	138	40	335	335	CD
10_1101-2021_02_08_430275	138	41	the	the	DT
10_1101-2021_02_08_430275	138	42	trait	trait	NN
10_1101-2021_02_08_430275	138	43	-	-	HYPH
10_1101-2021_02_08_430275	138	44	associated	associate	VBN
10_1101-2021_02_08_430275	138	45	genomic	genomic	JJ
10_1101-2021_02_08_430275	138	46	regions	region	NNS
10_1101-2021_02_08_430275	138	47	.	.	.
10_1101-2021_02_08_430275	139	1	A	a	DT
10_1101-2021_02_08_430275	139	2	SNP	SNP	NNP
10_1101-2021_02_08_430275	139	3	normally	normally	RB
10_1101-2021_02_08_430275	139	4	has	have	VBZ
10_1101-2021_02_08_430275	139	5	less	less	JJR
10_1101-2021_02_08_430275	139	6	336	336	CD
10_1101-2021_02_08_430275	139	7	than	than	IN
10_1101-2021_02_08_430275	139	8	100	100	CD
10_1101-2021_02_08_430275	139	9	reads	read	NNS
10_1101-2021_02_08_430275	139	10	because	because	IN
10_1101-2021_02_08_430275	139	11	of	of	IN
10_1101-2021_02_08_430275	139	12	the	the	DT
10_1101-2021_02_08_430275	139	13	cost	cost	NN
10_1101-2021_02_08_430275	139	14	concern	concern	NN
10_1101-2021_02_08_430275	139	15	,	,	,
10_1101-2021_02_08_430275	139	16	while	while	IN
10_1101-2021_02_08_430275	139	17	a	a	DT
10_1101-2021_02_08_430275	139	18	sliding	slide	VBG
10_1101-2021_02_08_430275	139	19	337	337	CD
10_1101-2021_02_08_430275	139	20	4	4	CD
10_1101-2021_02_08_430275	139	21	|	|	CD
10_1101-2021_02_08_430275	139	22	https://doi.org/10.1101/654137	https://doi.org/10.1101/654137	NN
10_1101-2021_02_08_430275	139	23	Zhang	Zhang	NNP
10_1101-2021_02_08_430275	139	24	et	et	NNP
10_1101-2021_02_08_430275	139	25	al	al	NNP
10_1101-2021_02_08_430275	139	26	.	.	.
10_1101-2021_02_08_430275	140	1	.CC	.CC	NFP
10_1101-2021_02_08_430275	140	2	-	-	:
10_1101-2021_02_08_430275	140	3	BY	by	IN
10_1101-2021_02_08_430275	140	4	-	-	HYPH
10_1101-2021_02_08_430275	140	5	NC	NC	NNP
10_1101-2021_02_08_430275	140	6	-	-	HYPH
10_1101-2021_02_08_430275	140	7	ND	ND	NNP
10_1101-2021_02_08_430275	140	8	4.0	4.0	CD
10_1101-2021_02_08_430275	140	9	International	International	NNP
10_1101-2021_02_08_430275	140	10	licenseavailable	licenseavailable	NN
10_1101-2021_02_08_430275	140	11	under	under	IN
10_1101-2021_02_08_430275	140	12	a	a	DT
10_1101-2021_02_08_430275	140	13	(	(	-LRB-
10_1101-2021_02_08_430275	140	14	which	which	WDT
10_1101-2021_02_08_430275	140	15	was	be	VBD
10_1101-2021_02_08_430275	140	16	not	not	RB
10_1101-2021_02_08_430275	140	17	certified	certify	VBN
10_1101-2021_02_08_430275	140	18	by	by	IN
10_1101-2021_02_08_430275	140	19	peer	peer	NN
10_1101-2021_02_08_430275	140	20	review	review	NN
10_1101-2021_02_08_430275	140	21	)	)	-RRB-
10_1101-2021_02_08_430275	140	22	is	be	VBZ
10_1101-2021_02_08_430275	140	23	the	the	DT
10_1101-2021_02_08_430275	140	24	author	author	NN
10_1101-2021_02_08_430275	140	25	/	/	SYM
10_1101-2021_02_08_430275	140	26	funder	funder	NN
10_1101-2021_02_08_430275	140	27	,	,	,
10_1101-2021_02_08_430275	140	28	who	who	WP
10_1101-2021_02_08_430275	140	29	has	have	VBZ
10_1101-2021_02_08_430275	140	30	granted	grant	VBN
10_1101-2021_02_08_430275	140	31	bioRxiv	biorxiv	IN
10_1101-2021_02_08_430275	140	32	a	a	DT
10_1101-2021_02_08_430275	140	33	license	license	NN
10_1101-2021_02_08_430275	140	34	to	to	TO
10_1101-2021_02_08_430275	140	35	display	display	VB
10_1101-2021_02_08_430275	140	36	the	the	DT
10_1101-2021_02_08_430275	140	37	preprint	preprint	NN
10_1101-2021_02_08_430275	140	38	in	in	IN
10_1101-2021_02_08_430275	140	39	perpetuity	perpetuity	NN
10_1101-2021_02_08_430275	140	40	.	.	.
10_1101-2021_02_08_430275	141	1	It	-PRON-	PRP
10_1101-2021_02_08_430275	141	2	is	be	VBZ
10_1101-2021_02_08_430275	141	3	made	make	VBN
10_1101-2021_02_08_430275	141	4	The	the	DT
10_1101-2021_02_08_430275	141	5	copyright	copyright	NN
10_1101-2021_02_08_430275	141	6	holder	holder	NN
10_1101-2021_02_08_430275	141	7	for	for	IN
10_1101-2021_02_08_430275	141	8	this	this	DT
10_1101-2021_02_08_430275	141	9	preprintthis	preprintthis	NN
10_1101-2021_02_08_430275	141	10	version	version	NN
10_1101-2021_02_08_430275	141	11	posted	post	VBD
10_1101-2021_02_08_430275	141	12	February	February	NNP
10_1101-2021_02_08_430275	141	13	10	10	CD
10_1101-2021_02_08_430275	141	14	,	,	,
10_1101-2021_02_08_430275	141	15	2021	2021	CD
10_1101-2021_02_08_430275	141	16	.	.	.
10_1101-2021_02_08_430275	141	17	;	;	:
10_1101-2021_02_08_430275	141	18	https://doi.org/10.1101/2021.02.08.430275doi	https://doi.org/10.1101/2021.02.08.430275doi	ADD
10_1101-2021_02_08_430275	141	19	:	:	:
10_1101-2021_02_08_430275	141	20	bioRxiv	biorxiv	IN
10_1101-2021_02_08_430275	141	21	preprint	preprint	NN
10_1101-2021_02_08_430275	141	22	https://doi.org/10.1101/654137	https://doi.org/10.1101/654137	VBZ
10_1101-2021_02_08_430275	141	23	https://doi.org/10.1101/2021.02.08.430275	https://doi.org/10.1101/2021.02.08.430275	NNP
10_1101-2021_02_08_430275	141	24	http://creativecommons.org/licenses/by-nc-nd/4.0/	http://creativecommons.org/licenses/by-nc-nd/4.0/	NNP
10_1101-2021_02_08_430275	141	25	DR	DR	NNP
10_1101-2021_02_08_430275	141	26	AF	AF	NNP
10_1101-2021_02_08_430275	141	27	T	T	NNP
10_1101-2021_02_08_430275	141	28	0	0	CD
10_1101-2021_02_08_430275	141	29	2500	2500	CD
10_1101-2021_02_08_430275	141	30	5000	5000	CD
10_1101-2021_02_08_430275	141	31	7500	7500	CD
10_1101-2021_02_08_430275	141	32	10000	10000	CD
10_1101-2021_02_08_430275	141	33	12500	12500	CD
10_1101-2021_02_08_430275	141	34	N	N	NNP
10_1101-2021_02_08_430275	141	35	um	um	UH
10_1101-2021_02_08_430275	141	36	be	be	VB
10_1101-2021_02_08_430275	141	37	r	r	NN
10_1101-2021_02_08_430275	141	38	o	o	NN
10_1101-2021_02_08_430275	141	39	f	f	NN
10_1101-2021_02_08_430275	141	40	S	s	NN
10_1101-2021_02_08_430275	141	41	N	N	NNP
10_1101-2021_02_08_430275	141	42	P	P	NNP
10_1101-2021_02_08_430275	141	43	s	s	NN
10_1101-2021_02_08_430275	141	44	Chr1	Chr1	NNPS
10_1101-2021_02_08_430275	141	45	Chr2	Chr2	NNP
10_1101-2021_02_08_430275	141	46	Chr3	chr3	NN
10_1101-2021_02_08_430275	141	47	Chr4	chr4	NN
10_1101-2021_02_08_430275	141	48	Chr5	Chr5	VBZ
10_1101-2021_02_08_430275	141	49	Chr6	Chr6	NNP
10_1101-2021_02_08_430275	141	50	Chr7	Chr7	NNP
10_1101-2021_02_08_430275	141	51	Chr8	Chr8	NNP
10_1101-2021_02_08_430275	141	52	Chr9	Chr9	NNP
10_1101-2021_02_08_430275	141	53	Chr10	Chr10	NNP
10_1101-2021_02_08_430275	141	54	Chr11	Chr11	NNP
10_1101-2021_02_08_430275	141	55	Chr12	Chr12	NNP
10_1101-2021_02_08_430275	141	56	0.0	0.0	CD
10_1101-2021_02_08_430275	141	57	0.2	0.2	CD
10_1101-2021_02_08_430275	141	58	0.4	0.4	CD
10_1101-2021_02_08_430275	141	59	sS	ss	NN
10_1101-2021_02_08_430275	141	60	N	N	NNP
10_1101-2021_02_08_430275	141	61	P	P	NNP
10_1101-2021_02_08_430275	141	62	/to	/to	:
10_1101-2021_02_08_430275	141	63	ta	ta	ADD
10_1101-2021_02_08_430275	141	64	lS	lS	NNP
10_1101-2021_02_08_430275	141	65	N	N	NNP
10_1101-2021_02_08_430275	141	66	P	P	NNP
10_1101-2021_02_08_430275	141	67	2.5	2.5	CD
10_1101-2021_02_08_430275	141	68	5.0	5.0	CD
10_1101-2021_02_08_430275	141	69	7.5	7.5	CD
10_1101-2021_02_08_430275	141	70	G	g	NN
10_1101-2021_02_08_430275	141	71	-s	-s	:
10_1101-2021_02_08_430275	141	72	ta	ta	ADD
10_1101-2021_02_08_430275	141	73	tis	tis	NNP
10_1101-2021_02_08_430275	141	74	tic	tic	NNP
10_1101-2021_02_08_430275	141	75	0	0	CD
10_1101-2021_02_08_430275	141	76	1	1	CD
10_1101-2021_02_08_430275	141	77	2	2	CD
10_1101-2021_02_08_430275	141	78	3	3	CD
10_1101-2021_02_08_430275	141	79	4	4	CD
10_1101-2021_02_08_430275	141	80	0.5	0.5	CD
10_1101-2021_02_08_430275	141	81	0.0	0.0	CD
10_1101-2021_02_08_430275	141	82	0.5	0.5	CD
10_1101-2021_02_08_430275	141	83	A	a	NN
10_1101-2021_02_08_430275	141	84	F	f	NN
10_1101-2021_02_08_430275	141	85	0	0	CD
10_1101-2021_02_08_430275	141	86	1	1	CD
10_1101-2021_02_08_430275	141	87	2	2	CD
10_1101-2021_02_08_430275	141	88	3	3	CD
10_1101-2021_02_08_430275	141	89	0	0	CD
10_1101-2021_02_08_430275	141	90	1	1	CD
10_1101-2021_02_08_430275	141	91	2	2	CD
10_1101-2021_02_08_430275	141	92	3	3	CD
10_1101-2021_02_08_430275	141	93	0	0	CD
10_1101-2021_02_08_430275	141	94	1	1	CD
10_1101-2021_02_08_430275	141	95	2	2	CD
10_1101-2021_02_08_430275	141	96	3	3	CD
10_1101-2021_02_08_430275	141	97	0	0	CD
10_1101-2021_02_08_430275	141	98	1	1	CD
10_1101-2021_02_08_430275	141	99	2	2	CD
10_1101-2021_02_08_430275	141	100	0	0	CD
10_1101-2021_02_08_430275	141	101	1	1	CD
10_1101-2021_02_08_430275	141	102	2	2	CD
10_1101-2021_02_08_430275	141	103	0	0	CD
10_1101-2021_02_08_430275	141	104	1	1	CD
10_1101-2021_02_08_430275	141	105	2	2	CD
10_1101-2021_02_08_430275	141	106	0	0	CD
10_1101-2021_02_08_430275	141	107	1	1	CD
10_1101-2021_02_08_430275	141	108	2	2	CD
10_1101-2021_02_08_430275	141	109	0	0	CD
10_1101-2021_02_08_430275	141	110	1	1	CD
10_1101-2021_02_08_430275	141	111	2	2	CD
10_1101-2021_02_08_430275	141	112	0	0	CD
10_1101-2021_02_08_430275	141	113	1	1	CD
10_1101-2021_02_08_430275	141	114	2	2	CD
10_1101-2021_02_08_430275	141	115	0	0	CD
10_1101-2021_02_08_430275	141	116	1	1	CD
10_1101-2021_02_08_430275	141	117	2	2	CD
10_1101-2021_02_08_430275	141	118	0	0	CD
10_1101-2021_02_08_430275	141	119	1	1	CD
10_1101-2021_02_08_430275	141	120	2	2	CD
10_1101-2021_02_08_430275	141	121	Genomic	genomic	JJ
10_1101-2021_02_08_430275	141	122	position	position	NN
10_1101-2021_02_08_430275	141	123	(	(	-LRB-
10_1101-2021_02_08_430275	141	124	×10	×10	NFP
10_1101-2021_02_08_430275	141	125	Mb	mb	NN
10_1101-2021_02_08_430275	141	126	)	)	-RRB-
10_1101-2021_02_08_430275	141	127	A	A	NNP
10_1101-2021_02_08_430275	141	128	B	b	NN
10_1101-2021_02_08_430275	141	129	C	c	NN
10_1101-2021_02_08_430275	141	130	D	d	NN
10_1101-2021_02_08_430275	141	131	Figure	figure	NN
10_1101-2021_02_08_430275	141	132	2	2	CD
10_1101-2021_02_08_430275	141	133	.	.	.
10_1101-2021_02_08_430275	142	1	BSA	BSA	NNP
10_1101-2021_02_08_430275	142	2	-	-	HYPH
10_1101-2021_02_08_430275	142	3	Seq	seq	NN
10_1101-2021_02_08_430275	142	4	data	data	NN
10_1101-2021_02_08_430275	142	5	analysis	analysis	NN
10_1101-2021_02_08_430275	142	6	using	use	VBG
10_1101-2021_02_08_430275	142	7	only	only	RB
10_1101-2021_02_08_430275	142	8	the	the	DT
10_1101-2021_02_08_430275	142	9	bulk	bulk	JJ
10_1101-2021_02_08_430275	142	10	genome	genome	JJ
10_1101-2021_02_08_430275	142	11	sequences	sequence	NNS
10_1101-2021_02_08_430275	142	12	.	.	.
10_1101-2021_02_08_430275	143	1	The	the	DT
10_1101-2021_02_08_430275	143	2	red	red	JJ
10_1101-2021_02_08_430275	143	3	lines	line	NNS
10_1101-2021_02_08_430275	143	4	/	/	SYM
10_1101-2021_02_08_430275	143	5	curves	curve	NNS
10_1101-2021_02_08_430275	143	6	are	be	VBP
10_1101-2021_02_08_430275	143	7	the	the	DT
10_1101-2021_02_08_430275	143	8	thresholds	threshold	NNS
10_1101-2021_02_08_430275	143	9	.	.	.
10_1101-2021_02_08_430275	144	1	(	(	-LRB-
10_1101-2021_02_08_430275	144	2	A	a	DT
10_1101-2021_02_08_430275	144	3	)	)	-RRB-
10_1101-2021_02_08_430275	144	4	Genomic	genomic	JJ
10_1101-2021_02_08_430275	144	5	distributions	distribution	NNS
10_1101-2021_02_08_430275	144	6	of	of	IN
10_1101-2021_02_08_430275	144	7	sSNPs	ssnps	CD
10_1101-2021_02_08_430275	144	8	(	(	-LRB-
10_1101-2021_02_08_430275	144	9	blue	blue	NNP
10_1101-2021_02_08_430275	144	10	)	)	-RRB-
10_1101-2021_02_08_430275	144	11	and	and	CC
10_1101-2021_02_08_430275	144	12	totalSNPs	totalsnps	RB
10_1101-2021_02_08_430275	144	13	(	(	-LRB-
10_1101-2021_02_08_430275	144	14	black	black	JJ
10_1101-2021_02_08_430275	144	15	)	)	-RRB-
10_1101-2021_02_08_430275	144	16	.	.	.
10_1101-2021_02_08_430275	145	1	(	(	-LRB-
10_1101-2021_02_08_430275	145	2	B	b	NN
10_1101-2021_02_08_430275	145	3	)	)	-RRB-
10_1101-2021_02_08_430275	145	4	Genomic	genomic	JJ
10_1101-2021_02_08_430275	145	5	distributions	distribution	NNS
10_1101-2021_02_08_430275	145	6	of	of	IN
10_1101-2021_02_08_430275	145	7	sSNP	ssnp	NN
10_1101-2021_02_08_430275	145	8	/	/	SYM
10_1101-2021_02_08_430275	145	9	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	145	10	ratios	ratio	NNS
10_1101-2021_02_08_430275	145	11	.	.	.
10_1101-2021_02_08_430275	146	1	(	(	-LRB-
10_1101-2021_02_08_430275	146	2	C	C	NNP
10_1101-2021_02_08_430275	146	3	)	)	-RRB-
10_1101-2021_02_08_430275	146	4	Genomic	genomic	JJ
10_1101-2021_02_08_430275	146	5	distributions	distribution	NNS
10_1101-2021_02_08_430275	146	6	of	of	IN
10_1101-2021_02_08_430275	146	7	G	g	NN
10_1101-2021_02_08_430275	146	8	-	-	HYPH
10_1101-2021_02_08_430275	146	9	statistic	statistic	NN
10_1101-2021_02_08_430275	146	10	values	value	NNS
10_1101-2021_02_08_430275	146	11	.	.	.
10_1101-2021_02_08_430275	147	1	(	(	-LRB-
10_1101-2021_02_08_430275	147	2	D	d	NN
10_1101-2021_02_08_430275	147	3	)	)	-RRB-
10_1101-2021_02_08_430275	147	4	Genomic	genomic	JJ
10_1101-2021_02_08_430275	147	5	distributions	distribution	NNS
10_1101-2021_02_08_430275	147	6	of	of	IN
10_1101-2021_02_08_430275	147	7	ΔAF	δaf	NN
10_1101-2021_02_08_430275	147	8	values	value	NNS
10_1101-2021_02_08_430275	147	9	.	.	.
10_1101-2021_02_08_430275	148	1	window	window	NN
10_1101-2021_02_08_430275	148	2	normally	normally	RB
10_1101-2021_02_08_430275	148	3	contains	contain	VBZ
10_1101-2021_02_08_430275	148	4	thousands	thousand	NNS
10_1101-2021_02_08_430275	148	5	of	of	IN
10_1101-2021_02_08_430275	148	6	SNPs	snp	NNS
10_1101-2021_02_08_430275	148	7	.	.	.
10_1101-2021_02_08_430275	149	1	Thus	thus	RB
10_1101-2021_02_08_430275	149	2	,	,	,
10_1101-2021_02_08_430275	149	3	the	the	DT
10_1101-2021_02_08_430275	149	4	sig-338	sig-338	JJ
10_1101-2021_02_08_430275	149	5	nificant	nificant	JJ
10_1101-2021_02_08_430275	149	6	structural	structural	JJ
10_1101-2021_02_08_430275	149	7	variant	variant	JJ
10_1101-2021_02_08_430275	149	8	method	method	NN
10_1101-2021_02_08_430275	149	9	has	have	VBZ
10_1101-2021_02_08_430275	149	10	much	much	RB
10_1101-2021_02_08_430275	149	11	higher	high	JJR
10_1101-2021_02_08_430275	149	12	statistical339	statistical339	NNP
10_1101-2021_02_08_430275	149	13	power	power	NN
10_1101-2021_02_08_430275	149	14	,	,	,
10_1101-2021_02_08_430275	149	15	which	which	WDT
10_1101-2021_02_08_430275	149	16	is	be	VBZ
10_1101-2021_02_08_430275	149	17	consistent	consistent	JJ
10_1101-2021_02_08_430275	149	18	with	with	IN
10_1101-2021_02_08_430275	149	19	our	-PRON-	PRP$
10_1101-2021_02_08_430275	149	20	observation	observation	NN
10_1101-2021_02_08_430275	149	21	.	.	.
10_1101-2021_02_08_430275	150	1	Our	-PRON-	PRP$
10_1101-2021_02_08_430275	150	2	results340	results340	NNP
10_1101-2021_02_08_430275	150	3	revealed	reveal	VBD
10_1101-2021_02_08_430275	150	4	that	that	IN
10_1101-2021_02_08_430275	150	5	the	the	DT
10_1101-2021_02_08_430275	150	6	parental	parental	JJ
10_1101-2021_02_08_430275	150	7	genome	genome	NN
10_1101-2021_02_08_430275	150	8	sequences	sequence	NNS
10_1101-2021_02_08_430275	150	9	did	do	VBD
10_1101-2021_02_08_430275	150	10	not	not	RB
10_1101-2021_02_08_430275	150	11	much341	much341	RB
10_1101-2021_02_08_430275	150	12	affect	affect	VB
10_1101-2021_02_08_430275	150	13	the	the	DT
10_1101-2021_02_08_430275	150	14	plot	plot	NN
10_1101-2021_02_08_430275	150	15	patterns	pattern	NNS
10_1101-2021_02_08_430275	150	16	of	of	IN
10_1101-2021_02_08_430275	150	17	the	the	DT
10_1101-2021_02_08_430275	150	18	sSNP	ssnp	NN
10_1101-2021_02_08_430275	150	19	/	/	SYM
10_1101-2021_02_08_430275	150	20	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	150	21	ratios	ratio	NNS
10_1101-2021_02_08_430275	150	22	and	and	CC
10_1101-2021_02_08_430275	150	23	the342	the342	NNP
10_1101-2021_02_08_430275	150	24	G	g	NN
10_1101-2021_02_08_430275	150	25	-	-	HYPH
10_1101-2021_02_08_430275	150	26	statistic	statistic	NN
10_1101-2021_02_08_430275	150	27	values	value	NNS
10_1101-2021_02_08_430275	150	28	.	.	.
10_1101-2021_02_08_430275	151	1	However	however	RB
10_1101-2021_02_08_430275	151	2	,	,	,
10_1101-2021_02_08_430275	151	3	the	the	DT
10_1101-2021_02_08_430275	151	4	plot	plot	NN
10_1101-2021_02_08_430275	151	5	patterns	pattern	NNS
10_1101-2021_02_08_430275	151	6	of	of	IN
10_1101-2021_02_08_430275	151	7	the	the	DT
10_1101-2021_02_08_430275	151	8	ΔAF343	ΔAF343	NNP
10_1101-2021_02_08_430275	151	9	value	value	NN
10_1101-2021_02_08_430275	151	10	of	of	IN
10_1101-2021_02_08_430275	151	11	chromosome	chromosome	NN
10_1101-2021_02_08_430275	151	12	11	11	CD
10_1101-2021_02_08_430275	151	13	were	be	VBD
10_1101-2021_02_08_430275	151	14	altered	alter	VBN
10_1101-2021_02_08_430275	151	15	dramatically	dramatically	RB
10_1101-2021_02_08_430275	151	16	when	when	WRB
10_1101-2021_02_08_430275	151	17	the344	the344	,
10_1101-2021_02_08_430275	151	18	parental	parental	JJ
10_1101-2021_02_08_430275	151	19	genome	genome	NN
10_1101-2021_02_08_430275	151	20	sequences	sequence	NNS
10_1101-2021_02_08_430275	151	21	were	be	VBD
10_1101-2021_02_08_430275	151	22	not	not	RB
10_1101-2021_02_08_430275	151	23	used.345	used.345	NNP
10_1101-2021_02_08_430275	151	24	The	the	DT
10_1101-2021_02_08_430275	151	25	significant	significant	JJ
10_1101-2021_02_08_430275	151	26	structural	structural	JJ
10_1101-2021_02_08_430275	151	27	variant	variant	JJ
10_1101-2021_02_08_430275	151	28	method	method	NN
10_1101-2021_02_08_430275	151	29	assesses	assess	VBZ
10_1101-2021_02_08_430275	151	30	if	if	IN
10_1101-2021_02_08_430275	151	31	a	a	DT
10_1101-2021_02_08_430275	151	32	SNP346	SNP346	NNP
10_1101-2021_02_08_430275	151	33	is	be	VBZ
10_1101-2021_02_08_430275	151	34	likely	likely	RB
10_1101-2021_02_08_430275	151	35	associated	associate	VBN
10_1101-2021_02_08_430275	151	36	with	with	IN
10_1101-2021_02_08_430275	151	37	the	the	DT
10_1101-2021_02_08_430275	151	38	trait	trait	NN
10_1101-2021_02_08_430275	151	39	via	via	IN
10_1101-2021_02_08_430275	151	40	Fisher	Fisher	NNP
10_1101-2021_02_08_430275	151	41	’s	’s	POS
10_1101-2021_02_08_430275	151	42	exact	exact	JJ
10_1101-2021_02_08_430275	151	43	test	test	NN
10_1101-2021_02_08_430275	151	44	.	.	.
10_1101-2021_02_08_430275	152	1	The347	the347	LS
10_1101-2021_02_08_430275	152	2	greater	great	JJR
10_1101-2021_02_08_430275	152	3	the	the	DT
10_1101-2021_02_08_430275	152	4	ALT	ALT	NNP
10_1101-2021_02_08_430275	152	5	proportion	proportion	NN
10_1101-2021_02_08_430275	152	6	differences	difference	NNS
10_1101-2021_02_08_430275	152	7	between	between	IN
10_1101-2021_02_08_430275	152	8	the	the	DT
10_1101-2021_02_08_430275	152	9	bulks	bulk	NNS
10_1101-2021_02_08_430275	152	10	,	,	,
10_1101-2021_02_08_430275	152	11	the348	the348	,
10_1101-2021_02_08_430275	152	12	less	less	JJR
10_1101-2021_02_08_430275	152	13	the	the	DT
10_1101-2021_02_08_430275	152	14	P	p	NN
10_1101-2021_02_08_430275	152	15	-	-	HYPH
10_1101-2021_02_08_430275	152	16	value	value	NN
10_1101-2021_02_08_430275	152	17	of	of	IN
10_1101-2021_02_08_430275	152	18	the	the	DT
10_1101-2021_02_08_430275	152	19	Fisher	Fisher	NNP
10_1101-2021_02_08_430275	152	20	’s	’s	POS
10_1101-2021_02_08_430275	152	21	exact	exact	JJ
10_1101-2021_02_08_430275	152	22	test	test	NN
10_1101-2021_02_08_430275	152	23	,	,	,
10_1101-2021_02_08_430275	152	24	and	and	CC
10_1101-2021_02_08_430275	152	25	the	the	DT
10_1101-2021_02_08_430275	152	26	more	more	RBR
10_1101-2021_02_08_430275	152	27	likely349	likely349	NNP
10_1101-2021_02_08_430275	152	28	the	the	DT
10_1101-2021_02_08_430275	152	29	SNP	SNP	NNP
10_1101-2021_02_08_430275	152	30	is	be	VBZ
10_1101-2021_02_08_430275	152	31	associated	associate	VBN
10_1101-2021_02_08_430275	152	32	with	with	IN
10_1101-2021_02_08_430275	152	33	the	the	DT
10_1101-2021_02_08_430275	152	34	trait	trait	NN
10_1101-2021_02_08_430275	152	35	.	.	.
10_1101-2021_02_08_430275	153	1	Fisher	Fisher	NNP
10_1101-2021_02_08_430275	153	2	’s	’s	POS
10_1101-2021_02_08_430275	153	3	exact	exact	JJ
10_1101-2021_02_08_430275	153	4	test	test	NN
10_1101-2021_02_08_430275	153	5	takes	take	VBZ
10_1101-2021_02_08_430275	153	6	a350	a350	JJ
10_1101-2021_02_08_430275	153	7	numpy	numpy	JJ
10_1101-2021_02_08_430275	153	8	array	array	NN
10_1101-2021_02_08_430275	153	9	or	or	CC
10_1101-2021_02_08_430275	153	10	a	a	DT
10_1101-2021_02_08_430275	153	11	Python	Python	NNP
10_1101-2021_02_08_430275	153	12	list	list	NN
10_1101-2021_02_08_430275	153	13	as	as	IN
10_1101-2021_02_08_430275	153	14	its	-PRON-	PRP$
10_1101-2021_02_08_430275	153	15	input	input	NN
10_1101-2021_02_08_430275	153	16	,	,	,
10_1101-2021_02_08_430275	153	17	the	the	DT
10_1101-2021_02_08_430275	153	18	same	same	JJ
10_1101-2021_02_08_430275	153	19	P	p	NN
10_1101-2021_02_08_430275	153	20	-	-	HYPH
10_1101-2021_02_08_430275	153	21	value	value	NN
10_1101-2021_02_08_430275	153	22	will351	will351	NN
10_1101-2021_02_08_430275	153	23	be	be	VB
10_1101-2021_02_08_430275	153	24	obtained	obtain	VBN
10_1101-2021_02_08_430275	153	25	with	with	IN
10_1101-2021_02_08_430275	153	26	either	either	DT
10_1101-2021_02_08_430275	153	27	[	[	-LRB-
10_1101-2021_02_08_430275	153	28	[	[	-LRB-
10_1101-2021_02_08_430275	153	29	ADref1	ADref1	NNP
10_1101-2021_02_08_430275	153	30	,	,	,
10_1101-2021_02_08_430275	153	31	ADalt1	ADalt1	NNP
10_1101-2021_02_08_430275	153	32	]	]	-RRB-
10_1101-2021_02_08_430275	153	33	,	,	,
10_1101-2021_02_08_430275	153	34	[	[	-LRB-
10_1101-2021_02_08_430275	153	35	ADref2	ADref2	NNP
10_1101-2021_02_08_430275	153	36	,	,	,
10_1101-2021_02_08_430275	153	37	ADalt2	ADalt2	NNP
10_1101-2021_02_08_430275	153	38	]	]	-RRB-
10_1101-2021_02_08_430275	153	39	]	]	-RRB-
10_1101-2021_02_08_430275	153	40	or352	or352	NN
10_1101-2021_02_08_430275	153	41	[	[	-LRB-
10_1101-2021_02_08_430275	153	42	[	[	-LRB-
10_1101-2021_02_08_430275	153	43	ADalt1	ADalt1	NNP
10_1101-2021_02_08_430275	153	44	,	,	,
10_1101-2021_02_08_430275	153	45	ADref1	ADref1	NNP
10_1101-2021_02_08_430275	153	46	]	]	-RRB-
10_1101-2021_02_08_430275	153	47	,	,	,
10_1101-2021_02_08_430275	153	48	[	[	-LRB-
10_1101-2021_02_08_430275	153	49	ADalt2	ADalt2	NNP
10_1101-2021_02_08_430275	153	50	,	,	,
10_1101-2021_02_08_430275	153	51	ADref2	ADref2	NNP
10_1101-2021_02_08_430275	153	52	]	]	-RRB-
10_1101-2021_02_08_430275	153	53	]	]	-RRB-
10_1101-2021_02_08_430275	153	54	as	as	IN
10_1101-2021_02_08_430275	153	55	its	-PRON-	PRP$
10_1101-2021_02_08_430275	153	56	input	input	NN
10_1101-2021_02_08_430275	153	57	.	.	.
10_1101-2021_02_08_430275	154	1	The	the	DT
10_1101-2021_02_08_430275	154	2	G	G	NNP
10_1101-2021_02_08_430275	154	3	-	-	HYPH
10_1101-2021_02_08_430275	154	4	statistic353	statistic353	NNP
10_1101-2021_02_08_430275	154	5	method	method	NN
10_1101-2021_02_08_430275	154	6	assesses	assess	VBZ
10_1101-2021_02_08_430275	154	7	if	if	IN
10_1101-2021_02_08_430275	154	8	a	a	DT
10_1101-2021_02_08_430275	154	9	SNP	SNP	NNP
10_1101-2021_02_08_430275	154	10	is	be	VBZ
10_1101-2021_02_08_430275	154	11	likely	likely	RB
10_1101-2021_02_08_430275	154	12	associated	associate	VBN
10_1101-2021_02_08_430275	154	13	with	with	IN
10_1101-2021_02_08_430275	154	14	the	the	DT
10_1101-2021_02_08_430275	154	15	trait354	trait354	NN
10_1101-2021_02_08_430275	154	16	via	via	IN
10_1101-2021_02_08_430275	154	17	the	the	DT
10_1101-2021_02_08_430275	154	18	G	g	NN
10_1101-2021_02_08_430275	154	19	-	-	HYPH
10_1101-2021_02_08_430275	154	20	test	test	NN
10_1101-2021_02_08_430275	154	21	;	;	:
10_1101-2021_02_08_430275	154	22	the	the	DT
10_1101-2021_02_08_430275	154	23	greater	great	JJR
10_1101-2021_02_08_430275	154	24	the	the	DT
10_1101-2021_02_08_430275	154	25	G	g	NN
10_1101-2021_02_08_430275	154	26	-	-	HYPH
10_1101-2021_02_08_430275	154	27	statistic	statistic	NN
10_1101-2021_02_08_430275	154	28	value	value	NN
10_1101-2021_02_08_430275	154	29	of	of	IN
10_1101-2021_02_08_430275	154	30	a	a	DT
10_1101-2021_02_08_430275	154	31	SNP	SNP	NNP
10_1101-2021_02_08_430275	154	32	,	,	,
10_1101-2021_02_08_430275	154	33	the355	the355	PRP
10_1101-2021_02_08_430275	154	34	more	more	RBR
10_1101-2021_02_08_430275	154	35	likely	likely	JJ
10_1101-2021_02_08_430275	154	36	it	-PRON-	PRP
10_1101-2021_02_08_430275	154	37	contributes	contribute	VBZ
10_1101-2021_02_08_430275	154	38	to	to	IN
10_1101-2021_02_08_430275	154	39	the	the	DT
10_1101-2021_02_08_430275	154	40	trait	trait	NN
10_1101-2021_02_08_430275	154	41	phenotype	phenotype	NN
10_1101-2021_02_08_430275	154	42	(	(	-LRB-
10_1101-2021_02_08_430275	154	43	11	11	CD
10_1101-2021_02_08_430275	154	44	)	)	-RRB-
10_1101-2021_02_08_430275	154	45	.	.	.
10_1101-2021_02_08_430275	155	1	The	the	DT
10_1101-2021_02_08_430275	155	2	G-356	G-356	NNP
10_1101-2021_02_08_430275	155	3	statistic	statistic	NN
10_1101-2021_02_08_430275	155	4	values	value	NNS
10_1101-2021_02_08_430275	155	5	are	be	VBP
10_1101-2021_02_08_430275	155	6	the	the	DT
10_1101-2021_02_08_430275	155	7	same	same	JJ
10_1101-2021_02_08_430275	155	8	with	with	IN
10_1101-2021_02_08_430275	155	9	either	either	DT
10_1101-2021_02_08_430275	155	10	input	input	NN
10_1101-2021_02_08_430275	155	11	[	[	-LRB-
10_1101-2021_02_08_430275	155	12	[	[	-LRB-
10_1101-2021_02_08_430275	155	13	ADref1	ADref1	NNP
10_1101-2021_02_08_430275	155	14	,	,	,
10_1101-2021_02_08_430275	155	15	ADalt1],357	ADalt1],357	NNP
10_1101-2021_02_08_430275	155	16	[	[	-LRB-
10_1101-2021_02_08_430275	155	17	ADref2	ADref2	NNP
10_1101-2021_02_08_430275	155	18	,	,	,
10_1101-2021_02_08_430275	155	19	ADalt2	ADalt2	NNP
10_1101-2021_02_08_430275	155	20	]	]	-RRB-
10_1101-2021_02_08_430275	155	21	]	]	-RRB-
10_1101-2021_02_08_430275	155	22	or	or	CC
10_1101-2021_02_08_430275	155	23	[	[	-LRB-
10_1101-2021_02_08_430275	155	24	[	[	-LRB-
10_1101-2021_02_08_430275	155	25	ADalt1	ADalt1	NNP
10_1101-2021_02_08_430275	155	26	,	,	,
10_1101-2021_02_08_430275	155	27	ADref1	ADref1	NNP
10_1101-2021_02_08_430275	155	28	]	]	-RRB-
10_1101-2021_02_08_430275	155	29	,	,	,
10_1101-2021_02_08_430275	155	30	[	[	-LRB-
10_1101-2021_02_08_430275	155	31	ADalt2	ADalt2	NNP
10_1101-2021_02_08_430275	155	32	,	,	,
10_1101-2021_02_08_430275	155	33	ADref2	ADref2	NNP
10_1101-2021_02_08_430275	155	34	]	]	-RRB-
10_1101-2021_02_08_430275	155	35	]	]	-RRB-
10_1101-2021_02_08_430275	155	36	.	.	.
10_1101-2021_02_08_430275	156	1	The358	the358	CD
10_1101-2021_02_08_430275	156	2	order	order	NN
10_1101-2021_02_08_430275	156	3	of	of	IN
10_1101-2021_02_08_430275	156	4	the	the	DT
10_1101-2021_02_08_430275	156	5	AD	ad	NN
10_1101-2021_02_08_430275	156	6	values	value	NNS
10_1101-2021_02_08_430275	156	7	(	(	-LRB-
10_1101-2021_02_08_430275	156	8	REF	REF	NNP
10_1101-2021_02_08_430275	156	9	/	/	SYM
10_1101-2021_02_08_430275	156	10	ALT	ALT	NNP
10_1101-2021_02_08_430275	156	11	reads	read	VBZ
10_1101-2021_02_08_430275	156	12	)	)	-RRB-
10_1101-2021_02_08_430275	156	13	in	in	IN
10_1101-2021_02_08_430275	156	14	bulks	bulk	NNS
10_1101-2021_02_08_430275	156	15	does	do	VBZ
10_1101-2021_02_08_430275	156	16	not359	not359	RB
10_1101-2021_02_08_430275	156	17	affect	affect	VB
10_1101-2021_02_08_430275	156	18	the	the	DT
10_1101-2021_02_08_430275	156	19	P	p	NN
10_1101-2021_02_08_430275	156	20	-	-	HYPH
10_1101-2021_02_08_430275	156	21	value	value	NN
10_1101-2021_02_08_430275	156	22	of	of	IN
10_1101-2021_02_08_430275	156	23	Fisher	Fisher	NNP
10_1101-2021_02_08_430275	156	24	’s	’s	POS
10_1101-2021_02_08_430275	156	25	exact	exact	JJ
10_1101-2021_02_08_430275	156	26	test	test	NN
10_1101-2021_02_08_430275	156	27	or	or	CC
10_1101-2021_02_08_430275	156	28	the	the	DT
10_1101-2021_02_08_430275	156	29	G	g	NN
10_1101-2021_02_08_430275	156	30	-	-	HYPH
10_1101-2021_02_08_430275	156	31	statistic	statistic	NN
10_1101-2021_02_08_430275	156	32	value360	value360	NN
10_1101-2021_02_08_430275	156	33	of	of	IN
10_1101-2021_02_08_430275	156	34	G	g	NN
10_1101-2021_02_08_430275	156	35	-	-	HYPH
10_1101-2021_02_08_430275	156	36	test	test	NN
10_1101-2021_02_08_430275	156	37	,	,	,
10_1101-2021_02_08_430275	156	38	which	which	WDT
10_1101-2021_02_08_430275	156	39	is	be	VBZ
10_1101-2021_02_08_430275	156	40	why	why	WRB
10_1101-2021_02_08_430275	156	41	the	the	DT
10_1101-2021_02_08_430275	156	42	parental	parental	JJ
10_1101-2021_02_08_430275	156	43	genome	genome	NNP
10_1101-2021_02_08_430275	156	44	sequences	sequences	NNPS
10_1101-2021_02_08_430275	156	45	-	-	HYPH
10_1101-2021_02_08_430275	156	46	guided361	guided361	NNP
10_1101-2021_02_08_430275	156	47	AD	ad	NN
10_1101-2021_02_08_430275	156	48	swapping	swapping	NN
10_1101-2021_02_08_430275	156	49	does	do	VBZ
10_1101-2021_02_08_430275	156	50	not	not	RB
10_1101-2021_02_08_430275	156	51	alter	alter	VB
10_1101-2021_02_08_430275	156	52	the	the	DT
10_1101-2021_02_08_430275	156	53	curve	curve	NN
10_1101-2021_02_08_430275	156	54	patterns	pattern	NNS
10_1101-2021_02_08_430275	156	55	of	of	IN
10_1101-2021_02_08_430275	156	56	both	both	DT
10_1101-2021_02_08_430275	156	57	methods.362	methods.362	NNP
10_1101-2021_02_08_430275	156	58	Therefore	therefore	RB
10_1101-2021_02_08_430275	156	59	,	,	,
10_1101-2021_02_08_430275	156	60	theoretically	theoretically	RB
10_1101-2021_02_08_430275	156	61	,	,	,
10_1101-2021_02_08_430275	156	62	parental	parental	JJ
10_1101-2021_02_08_430275	156	63	genome	genome	NN
10_1101-2021_02_08_430275	156	64	sequences	sequence	NNS
10_1101-2021_02_08_430275	156	65	are	be	VBP
10_1101-2021_02_08_430275	156	66	not363	not363	RB
10_1101-2021_02_08_430275	156	67	required	require	VBN
10_1101-2021_02_08_430275	156	68	to	to	TO
10_1101-2021_02_08_430275	156	69	identify	identify	VB
10_1101-2021_02_08_430275	156	70	genomic	genomic	JJ
10_1101-2021_02_08_430275	156	71	region	region	NN
10_1101-2021_02_08_430275	156	72	-	-	HYPH
10_1101-2021_02_08_430275	156	73	trait	trait	NN
10_1101-2021_02_08_430275	156	74	associations	association	NNS
10_1101-2021_02_08_430275	156	75	in	in	IN
10_1101-2021_02_08_430275	156	76	either364	either364	NNP
10_1101-2021_02_08_430275	156	77	the	the	DT
10_1101-2021_02_08_430275	156	78	significant	significant	JJ
10_1101-2021_02_08_430275	156	79	structural	structural	JJ
10_1101-2021_02_08_430275	156	80	variant	variant	JJ
10_1101-2021_02_08_430275	156	81	method	method	NN
10_1101-2021_02_08_430275	156	82	or	or	CC
10_1101-2021_02_08_430275	156	83	the	the	DT
10_1101-2021_02_08_430275	156	84	G	G	NNP
10_1101-2021_02_08_430275	156	85	-	-	HYPH
10_1101-2021_02_08_430275	156	86	statistic365	statistic365	NNP
10_1101-2021_02_08_430275	156	87	method	method	NN
10_1101-2021_02_08_430275	156	88	.	.	.
10_1101-2021_02_08_430275	157	1	366	366	CD
10_1101-2021_02_08_430275	157	2	When	when	WRB
10_1101-2021_02_08_430275	157	3	the	the	DT
10_1101-2021_02_08_430275	157	4	parental	parental	JJ
10_1101-2021_02_08_430275	157	5	genome	genome	JJ
10_1101-2021_02_08_430275	157	6	sequences	sequence	NNS
10_1101-2021_02_08_430275	157	7	were	be	VBD
10_1101-2021_02_08_430275	157	8	used	use	VBN
10_1101-2021_02_08_430275	157	9	,	,	,
10_1101-2021_02_08_430275	157	10	AD	ad	NN
10_1101-2021_02_08_430275	157	11	value	value	NN
10_1101-2021_02_08_430275	157	12	367	367	CD
10_1101-2021_02_08_430275	157	13	swapping	swapping	NN
10_1101-2021_02_08_430275	157	14	was	be	VBD
10_1101-2021_02_08_430275	157	15	performed	perform	VBN
10_1101-2021_02_08_430275	157	16	for	for	IN
10_1101-2021_02_08_430275	157	17	the	the	DT
10_1101-2021_02_08_430275	157	18	SNPs	snp	NNS
10_1101-2021_02_08_430275	157	19	in	in	IN
10_1101-2021_02_08_430275	157	20	which	which	WDT
10_1101-2021_02_08_430275	157	21	the	the	DT
10_1101-2021_02_08_430275	157	22	genotype	genotype	NN
10_1101-2021_02_08_430275	157	23	of	of	IN
10_1101-2021_02_08_430275	157	24	368	368	CD
10_1101-2021_02_08_430275	157	25	LD24	LD24	NNP
10_1101-2021_02_08_430275	157	26	was	be	VBD
10_1101-2021_02_08_430275	157	27	different	different	JJ
10_1101-2021_02_08_430275	157	28	from	from	IN
10_1101-2021_02_08_430275	157	29	the	the	DT
10_1101-2021_02_08_430275	157	30	REF	REF	NNP
10_1101-2021_02_08_430275	157	31	base	base	NN
10_1101-2021_02_08_430275	157	32	,	,	,
10_1101-2021_02_08_430275	157	33	and	and	CC
10_1101-2021_02_08_430275	157	34	the	the	DT
10_1101-2021_02_08_430275	157	35	ΔAF	δaf	NN
10_1101-2021_02_08_430275	157	36	values	value	NNS
10_1101-2021_02_08_430275	157	37	of	of	IN
10_1101-2021_02_08_430275	157	38	369	369	CD
10_1101-2021_02_08_430275	157	39	these	these	DT
10_1101-2021_02_08_430275	157	40	SNPs	snp	NNS
10_1101-2021_02_08_430275	157	41	were	be	VBD
10_1101-2021_02_08_430275	157	42	calculated	calculate	VBN
10_1101-2021_02_08_430275	157	43	based	base	VBN
10_1101-2021_02_08_430275	157	44	on	on	IN
10_1101-2021_02_08_430275	157	45	the	the	DT
10_1101-2021_02_08_430275	157	46	swapped	swap	VBN
10_1101-2021_02_08_430275	157	47	AD	ad	NN
10_1101-2021_02_08_430275	157	48	values	value	NNS
10_1101-2021_02_08_430275	157	49	370	370	CD
10_1101-2021_02_08_430275	157	50	using	use	VBG
10_1101-2021_02_08_430275	157	51	equation	equation	NN
10_1101-2021_02_08_430275	157	52	1	1	CD
10_1101-2021_02_08_430275	157	53	.	.	.
10_1101-2021_02_08_430275	158	1	AD	ad	NN
10_1101-2021_02_08_430275	158	2	swapping	swapping	NN
10_1101-2021_02_08_430275	158	3	makes	make	VBZ
10_1101-2021_02_08_430275	158	4	the	the	DT
10_1101-2021_02_08_430275	158	5	adjacent	adjacent	JJ
10_1101-2021_02_08_430275	158	6	SNP	SNP	NNP
10_1101-2021_02_08_430275	158	7	alleles	allele	VBZ
10_1101-2021_02_08_430275	158	8	371	371	CD
10_1101-2021_02_08_430275	158	9	from	from	IN
10_1101-2021_02_08_430275	158	10	the	the	DT
10_1101-2021_02_08_430275	158	11	same	same	JJ
10_1101-2021_02_08_430275	158	12	parent	parent	NN
10_1101-2021_02_08_430275	158	13	have	have	VBP
10_1101-2021_02_08_430275	158	14	similar	similar	JJ
10_1101-2021_02_08_430275	158	15	AD	ad	NN
10_1101-2021_02_08_430275	158	16	values	value	NNS
10_1101-2021_02_08_430275	158	17	and	and	CC
10_1101-2021_02_08_430275	158	18	similar	similar	JJ
10_1101-2021_02_08_430275	158	19	ΔAF	δaf	NN
10_1101-2021_02_08_430275	158	20	372	372	CD
10_1101-2021_02_08_430275	158	21	values	value	NNS
10_1101-2021_02_08_430275	158	22	.	.	.
10_1101-2021_02_08_430275	159	1	The	the	DT
10_1101-2021_02_08_430275	159	2	ΔAF	δaf	NN
10_1101-2021_02_08_430275	159	3	values	value	NNS
10_1101-2021_02_08_430275	159	4	of	of	IN
10_1101-2021_02_08_430275	159	5	such	such	JJ
10_1101-2021_02_08_430275	159	6	SNPs	snp	NNS
10_1101-2021_02_08_430275	159	7	were	be	VBD
10_1101-2021_02_08_430275	159	8	calculated	calculate	VBN
10_1101-2021_02_08_430275	159	9	using	use	VBG
10_1101-2021_02_08_430275	159	10	373	373	CD
10_1101-2021_02_08_430275	159	11	equation	equation	NN
10_1101-2021_02_08_430275	159	12	2	2	CD
10_1101-2021_02_08_430275	159	13	if	if	IN
10_1101-2021_02_08_430275	159	14	not	not	RB
10_1101-2021_02_08_430275	159	15	performing	perform	VBG
10_1101-2021_02_08_430275	159	16	AD	ad	NN
10_1101-2021_02_08_430275	159	17	swapping	swapping	NN
10_1101-2021_02_08_430275	159	18	.	.	.
10_1101-2021_02_08_430275	160	1	Equation	equation	NN
10_1101-2021_02_08_430275	160	2	2	2	CD
10_1101-2021_02_08_430275	160	3	can	can	MD
10_1101-2021_02_08_430275	160	4	374	374	CD
10_1101-2021_02_08_430275	160	5	be	be	VB
10_1101-2021_02_08_430275	160	6	converted	convert	VBN
10_1101-2021_02_08_430275	160	7	to	to	IN
10_1101-2021_02_08_430275	160	8	equation	equation	NN
10_1101-2021_02_08_430275	160	9	3	3	CD
10_1101-2021_02_08_430275	160	10	,	,	,
10_1101-2021_02_08_430275	160	11	which	which	WDT
10_1101-2021_02_08_430275	160	12	produces	produce	VBZ
10_1101-2021_02_08_430275	160	13	an	an	DT
10_1101-2021_02_08_430275	160	14	opposite	opposite	JJ
10_1101-2021_02_08_430275	160	15	value	value	NN
10_1101-2021_02_08_430275	160	16	375	375	CD
10_1101-2021_02_08_430275	160	17	relative	relative	JJ
10_1101-2021_02_08_430275	160	18	to	to	IN
10_1101-2021_02_08_430275	160	19	that	that	DT
10_1101-2021_02_08_430275	160	20	produced	produce	VBN
10_1101-2021_02_08_430275	160	21	by	by	IN
10_1101-2021_02_08_430275	160	22	equation	equation	NN
10_1101-2021_02_08_430275	160	23	1	1	CD
10_1101-2021_02_08_430275	160	24	.	.	.
10_1101-2021_02_08_430275	161	1	For	for	IN
10_1101-2021_02_08_430275	161	2	two	two	CD
10_1101-2021_02_08_430275	161	3	adjacent	adjacent	JJ
10_1101-2021_02_08_430275	161	4	376	376	CD
10_1101-2021_02_08_430275	161	5	SNPs	snp	NNS
10_1101-2021_02_08_430275	161	6	in	in	IN
10_1101-2021_02_08_430275	161	7	LD24	LD24	NNP
10_1101-2021_02_08_430275	161	8	,	,	,
10_1101-2021_02_08_430275	161	9	where	where	WRB
10_1101-2021_02_08_430275	161	10	one	one	CD
10_1101-2021_02_08_430275	161	11	SNP	SNP	NNP
10_1101-2021_02_08_430275	161	12	has	have	VBZ
10_1101-2021_02_08_430275	161	13	the	the	DT
10_1101-2021_02_08_430275	161	14	same	same	JJ
10_1101-2021_02_08_430275	161	15	genotype	genotype	NN
10_1101-2021_02_08_430275	161	16	as	as	IN
10_1101-2021_02_08_430275	161	17	the	the	DT
10_1101-2021_02_08_430275	161	18	377	377	CD
10_1101-2021_02_08_430275	161	19	REF	REF	NNP
10_1101-2021_02_08_430275	161	20	base	base	NN
10_1101-2021_02_08_430275	161	21	while	while	IN
10_1101-2021_02_08_430275	161	22	the	the	DT
10_1101-2021_02_08_430275	161	23	other	other	JJ
10_1101-2021_02_08_430275	161	24	has	have	VBZ
10_1101-2021_02_08_430275	161	25	the	the	DT
10_1101-2021_02_08_430275	161	26	same	same	JJ
10_1101-2021_02_08_430275	161	27	genotype	genotype	NN
10_1101-2021_02_08_430275	161	28	as	as	IN
10_1101-2021_02_08_430275	161	29	the	the	DT
10_1101-2021_02_08_430275	161	30	ALT	ALT	NNP
10_1101-2021_02_08_430275	161	31	378	378	CD
10_1101-2021_02_08_430275	161	32	base	base	NN
10_1101-2021_02_08_430275	161	33	,	,	,
10_1101-2021_02_08_430275	161	34	they	-PRON-	PRP
10_1101-2021_02_08_430275	161	35	would	would	MD
10_1101-2021_02_08_430275	161	36	have	have	VB
10_1101-2021_02_08_430275	161	37	opposite	opposite	JJ
10_1101-2021_02_08_430275	161	38	ΔAF	δaf	NN
10_1101-2021_02_08_430275	161	39	values	value	NNS
10_1101-2021_02_08_430275	161	40	if	if	IN
10_1101-2021_02_08_430275	161	41	AD	ad	NN
10_1101-2021_02_08_430275	161	42	swapping	swap	VBG
10_1101-2021_02_08_430275	161	43	379	379	CD
10_1101-2021_02_08_430275	161	44	is	be	VBZ
10_1101-2021_02_08_430275	161	45	not	not	RB
10_1101-2021_02_08_430275	161	46	performed	perform	VBN
10_1101-2021_02_08_430275	161	47	.	.	.
10_1101-2021_02_08_430275	162	1	For	for	IN
10_1101-2021_02_08_430275	162	2	the	the	DT
10_1101-2021_02_08_430275	162	3	SNPs	snp	NNS
10_1101-2021_02_08_430275	162	4	that	that	WDT
10_1101-2021_02_08_430275	162	5	do	do	VBP
10_1101-2021_02_08_430275	162	6	not	not	RB
10_1101-2021_02_08_430275	162	7	contribute	contribute	VB
10_1101-2021_02_08_430275	162	8	to	to	IN
10_1101-2021_02_08_430275	162	9	380	380	CD
10_1101-2021_02_08_430275	162	10	the	the	DT
10_1101-2021_02_08_430275	162	11	trait	trait	NN
10_1101-2021_02_08_430275	162	12	phenotype	phenotype	NN
10_1101-2021_02_08_430275	162	13	and	and	CC
10_1101-2021_02_08_430275	162	14	are	be	VBP
10_1101-2021_02_08_430275	162	15	not	not	RB
10_1101-2021_02_08_430275	162	16	linked	link	VBN
10_1101-2021_02_08_430275	162	17	to	to	IN
10_1101-2021_02_08_430275	162	18	any	any	DT
10_1101-2021_02_08_430275	162	19	trait	trait	NN
10_1101-2021_02_08_430275	162	20	-	-	HYPH
10_1101-2021_02_08_430275	162	21	associated	associate	VBN
10_1101-2021_02_08_430275	162	22	381	381	CD
10_1101-2021_02_08_430275	162	23	genomic	genomic	JJ
10_1101-2021_02_08_430275	162	24	regions	region	NNS
10_1101-2021_02_08_430275	162	25	,	,	,
10_1101-2021_02_08_430275	162	26	their	-PRON-	PRP$
10_1101-2021_02_08_430275	162	27	ΔAF	δaf	NN
10_1101-2021_02_08_430275	162	28	value	value	NN
10_1101-2021_02_08_430275	162	29	should	should	MD
10_1101-2021_02_08_430275	162	30	fluctuate	fluctuate	VB
10_1101-2021_02_08_430275	162	31	around	around	RB
10_1101-2021_02_08_430275	162	32	382	382	CD
10_1101-2021_02_08_430275	162	33	zero	zero	CD
10_1101-2021_02_08_430275	162	34	.	.	.
10_1101-2021_02_08_430275	163	1	The	the	DT
10_1101-2021_02_08_430275	163	2	parental	parental	JJ
10_1101-2021_02_08_430275	163	3	genome	genome	JJ
10_1101-2021_02_08_430275	163	4	sequences	sequence	NNS
10_1101-2021_02_08_430275	163	5	will	will	MD
10_1101-2021_02_08_430275	163	6	have	have	VB
10_1101-2021_02_08_430275	163	7	less	less	JJR
10_1101-2021_02_08_430275	163	8	effect	effect	NN
10_1101-2021_02_08_430275	163	9	383	383	CD
10_1101-2021_02_08_430275	163	10	on	on	IN
10_1101-2021_02_08_430275	163	11	the	the	DT
10_1101-2021_02_08_430275	163	12	ΔAF	δaf	NN
10_1101-2021_02_08_430275	163	13	value	value	NN
10_1101-2021_02_08_430275	163	14	of	of	IN
10_1101-2021_02_08_430275	163	15	the	the	DT
10_1101-2021_02_08_430275	163	16	sliding	slide	VBG
10_1101-2021_02_08_430275	163	17	windows	window	NNS
10_1101-2021_02_08_430275	163	18	containing	contain	VBG
10_1101-2021_02_08_430275	163	19	such	such	JJ
10_1101-2021_02_08_430275	163	20	384	384	CD
10_1101-2021_02_08_430275	163	21	SNPs	snp	NNS
10_1101-2021_02_08_430275	163	22	.	.	.
10_1101-2021_02_08_430275	164	1	However	however	RB
10_1101-2021_02_08_430275	164	2	,	,	,
10_1101-2021_02_08_430275	164	3	for	for	IN
10_1101-2021_02_08_430275	164	4	trait	trait	NN
10_1101-2021_02_08_430275	164	5	-	-	HYPH
10_1101-2021_02_08_430275	164	6	associated	associate	VBN
10_1101-2021_02_08_430275	164	7	SNPs	snp	NNS
10_1101-2021_02_08_430275	164	8	,	,	,
10_1101-2021_02_08_430275	164	9	adjacent	adjacent	JJ
10_1101-2021_02_08_430275	164	10	SNPs	snp	NNS
10_1101-2021_02_08_430275	164	11	385	385	CD
10_1101-2021_02_08_430275	164	12	with	with	IN
10_1101-2021_02_08_430275	164	13	opposite	opposite	JJ
10_1101-2021_02_08_430275	164	14	ΔAF	δaf	NN
10_1101-2021_02_08_430275	164	15	values	value	NNS
10_1101-2021_02_08_430275	164	16	would	would	MD
10_1101-2021_02_08_430275	164	17	cancel	cancel	VB
10_1101-2021_02_08_430275	164	18	each	each	DT
10_1101-2021_02_08_430275	164	19	other	other	JJ
10_1101-2021_02_08_430275	164	20	out	out	RP
10_1101-2021_02_08_430275	164	21	and	and	CC
10_1101-2021_02_08_430275	164	22	386	386	CD
10_1101-2021_02_08_430275	164	23	lower	low	JJR
10_1101-2021_02_08_430275	164	24	the	the	DT
10_1101-2021_02_08_430275	164	25	ΔAF	δaf	NN
10_1101-2021_02_08_430275	164	26	value	value	NN
10_1101-2021_02_08_430275	164	27	of	of	IN
10_1101-2021_02_08_430275	164	28	the	the	DT
10_1101-2021_02_08_430275	164	29	sliding	slide	VBG
10_1101-2021_02_08_430275	164	30	window	window	NN
10_1101-2021_02_08_430275	164	31	significantly	significantly	RB
10_1101-2021_02_08_430275	164	32	,	,	,
10_1101-2021_02_08_430275	164	33	which	which	WDT
10_1101-2021_02_08_430275	164	34	387	387	CD
10_1101-2021_02_08_430275	164	35	is	be	VBZ
10_1101-2021_02_08_430275	164	36	the	the	DT
10_1101-2021_02_08_430275	164	37	case	case	NN
10_1101-2021_02_08_430275	164	38	observed	observe	VBN
10_1101-2021_02_08_430275	164	39	on	on	IN
10_1101-2021_02_08_430275	164	40	chromosome	chromosome	NN
10_1101-2021_02_08_430275	164	41	11	11	CD
10_1101-2021_02_08_430275	164	42	in	in	IN
10_1101-2021_02_08_430275	164	43	Figure	Figure	NNP
10_1101-2021_02_08_430275	164	44	2d	2d	NNP
10_1101-2021_02_08_430275	164	45	.	.	.
10_1101-2021_02_08_430275	165	1	388	388	CD
10_1101-2021_02_08_430275	165	2	∆AF	∆AF	NNP
10_1101-2021_02_08_430275	165	3	=	=	SYM
10_1101-2021_02_08_430275	165	4	ADref	ADref	NNP
10_1101-2021_02_08_430275	165	5	2	2	CD
10_1101-2021_02_08_430275	165	6	ADref	ADref	NNP
10_1101-2021_02_08_430275	165	7	2	2	CD
10_1101-2021_02_08_430275	165	8	+	+	CC
10_1101-2021_02_08_430275	165	9	ADalt2	ADalt2	NNP
10_1101-2021_02_08_430275	165	10	−	−	NNP
10_1101-2021_02_08_430275	165	11	ADref	ADref	NNP
10_1101-2021_02_08_430275	165	12	1	1	CD
10_1101-2021_02_08_430275	165	13	ADref	ADref	NNP
10_1101-2021_02_08_430275	165	14	1	1	CD
10_1101-2021_02_08_430275	165	15	+	+	SYM
10_1101-2021_02_08_430275	165	16	ADalt1	ADalt1	NNP
10_1101-2021_02_08_430275	165	17	[	[	-LRB-
10_1101-2021_02_08_430275	165	18	2	2	CD
10_1101-2021_02_08_430275	165	19	]	]	-RRB-
10_1101-2021_02_08_430275	165	20	389	389	CD
10_1101-2021_02_08_430275	165	21	Zhang	Zhang	NNP
10_1101-2021_02_08_430275	165	22	et	et	FW
10_1101-2021_02_08_430275	165	23	al	al	NNP
10_1101-2021_02_08_430275	165	24	.	.	.
10_1101-2021_02_08_430275	166	1	bioRχiv	bioRχiv	NNP
10_1101-2021_02_08_430275	166	2	|	|	NNP
10_1101-2021_02_08_430275	166	3	November	November	NNP
10_1101-2021_02_08_430275	166	4	24	24	CD
10_1101-2021_02_08_430275	166	5	,	,	,
10_1101-2021_02_08_430275	166	6	2020	2020	CD
10_1101-2021_02_08_430275	166	7	|	|	CD
10_1101-2021_02_08_430275	166	8	5	5	CD
10_1101-2021_02_08_430275	166	9	.CC	.CC	,
10_1101-2021_02_08_430275	166	10	-	-	HYPH
10_1101-2021_02_08_430275	166	11	BY	by	IN
10_1101-2021_02_08_430275	166	12	-	-	HYPH
10_1101-2021_02_08_430275	166	13	NC	NC	NNP
10_1101-2021_02_08_430275	166	14	-	-	HYPH
10_1101-2021_02_08_430275	166	15	ND	ND	NNP
10_1101-2021_02_08_430275	166	16	4.0	4.0	CD
10_1101-2021_02_08_430275	166	17	International	International	NNP
10_1101-2021_02_08_430275	166	18	licenseavailable	licenseavailable	NN
10_1101-2021_02_08_430275	166	19	under	under	IN
10_1101-2021_02_08_430275	166	20	a	a	DT
10_1101-2021_02_08_430275	166	21	(	(	-LRB-
10_1101-2021_02_08_430275	166	22	which	which	WDT
10_1101-2021_02_08_430275	166	23	was	be	VBD
10_1101-2021_02_08_430275	166	24	not	not	RB
10_1101-2021_02_08_430275	166	25	certified	certify	VBN
10_1101-2021_02_08_430275	166	26	by	by	IN
10_1101-2021_02_08_430275	166	27	peer	peer	NN
10_1101-2021_02_08_430275	166	28	review	review	NN
10_1101-2021_02_08_430275	166	29	)	)	-RRB-
10_1101-2021_02_08_430275	166	30	is	be	VBZ
10_1101-2021_02_08_430275	166	31	the	the	DT
10_1101-2021_02_08_430275	166	32	author	author	NN
10_1101-2021_02_08_430275	166	33	/	/	SYM
10_1101-2021_02_08_430275	166	34	funder	funder	NN
10_1101-2021_02_08_430275	166	35	,	,	,
10_1101-2021_02_08_430275	166	36	who	who	WP
10_1101-2021_02_08_430275	166	37	has	have	VBZ
10_1101-2021_02_08_430275	166	38	granted	grant	VBN
10_1101-2021_02_08_430275	166	39	bioRxiv	biorxiv	IN
10_1101-2021_02_08_430275	166	40	a	a	DT
10_1101-2021_02_08_430275	166	41	license	license	NN
10_1101-2021_02_08_430275	166	42	to	to	TO
10_1101-2021_02_08_430275	166	43	display	display	VB
10_1101-2021_02_08_430275	166	44	the	the	DT
10_1101-2021_02_08_430275	166	45	preprint	preprint	NN
10_1101-2021_02_08_430275	166	46	in	in	IN
10_1101-2021_02_08_430275	166	47	perpetuity	perpetuity	NN
10_1101-2021_02_08_430275	166	48	.	.	.
10_1101-2021_02_08_430275	167	1	It	-PRON-	PRP
10_1101-2021_02_08_430275	167	2	is	be	VBZ
10_1101-2021_02_08_430275	167	3	made	make	VBN
10_1101-2021_02_08_430275	167	4	The	the	DT
10_1101-2021_02_08_430275	167	5	copyright	copyright	NN
10_1101-2021_02_08_430275	167	6	holder	holder	NN
10_1101-2021_02_08_430275	167	7	for	for	IN
10_1101-2021_02_08_430275	167	8	this	this	DT
10_1101-2021_02_08_430275	167	9	preprintthis	preprintthis	NN
10_1101-2021_02_08_430275	167	10	version	version	NN
10_1101-2021_02_08_430275	167	11	posted	post	VBD
10_1101-2021_02_08_430275	167	12	February	February	NNP
10_1101-2021_02_08_430275	167	13	10	10	CD
10_1101-2021_02_08_430275	167	14	,	,	,
10_1101-2021_02_08_430275	167	15	2021	2021	CD
10_1101-2021_02_08_430275	167	16	.	.	.
10_1101-2021_02_08_430275	167	17	;	;	:
10_1101-2021_02_08_430275	167	18	https://doi.org/10.1101/2021.02.08.430275doi	https://doi.org/10.1101/2021.02.08.430275doi	ADD
10_1101-2021_02_08_430275	167	19	:	:	:
10_1101-2021_02_08_430275	167	20	bioRxiv	biorxiv	IN
10_1101-2021_02_08_430275	167	21	preprint	preprint	NN
10_1101-2021_02_08_430275	167	22	https://doi.org/10.1101/2021.02.08.430275	https://doi.org/10.1101/2021.02.08.430275	NNP
10_1101-2021_02_08_430275	167	23	http://creativecommons.org/licenses/by-nc-nd/4.0/	http://creativecommons.org/licenses/by-nc-nd/4.0/	NNP
10_1101-2021_02_08_430275	167	24	DR	DR	NNP
10_1101-2021_02_08_430275	167	25	AF	AF	NNP
10_1101-2021_02_08_430275	167	26	T	T	NNP
10_1101-2021_02_08_430275	167	27	∆AF	∆AF	NNP
10_1101-2021_02_08_430275	167	28	=	=	SYM
10_1101-2021_02_08_430275	167	29	ADalt1	ADalt1	NNP
10_1101-2021_02_08_430275	167	30	ADref	ADref	NNP
10_1101-2021_02_08_430275	167	31	1	1	CD
10_1101-2021_02_08_430275	167	32	+	+	SYM
10_1101-2021_02_08_430275	167	33	ADalt1	ADalt1	NNP
10_1101-2021_02_08_430275	167	34	−	−	NNP
10_1101-2021_02_08_430275	167	35	ADalt2	ADalt2	NNP
10_1101-2021_02_08_430275	167	36	ADref	ADref	NNP
10_1101-2021_02_08_430275	167	37	2	2	CD
10_1101-2021_02_08_430275	167	38	+	+	SYM
10_1101-2021_02_08_430275	167	39	ADalt2	ADalt2	NNP
10_1101-2021_02_08_430275	167	40	[	[	-LRB-
10_1101-2021_02_08_430275	167	41	3]390	3]390	CD
10_1101-2021_02_08_430275	167	42	When	when	WRB
10_1101-2021_02_08_430275	167	43	the	the	DT
10_1101-2021_02_08_430275	167	44	parental	parental	JJ
10_1101-2021_02_08_430275	167	45	genome	genome	NN
10_1101-2021_02_08_430275	167	46	sequences	sequence	NNS
10_1101-2021_02_08_430275	167	47	were	be	VBD
10_1101-2021_02_08_430275	167	48	not	not	RB
10_1101-2021_02_08_430275	167	49	used	use	VBN
10_1101-2021_02_08_430275	167	50	,	,	,
10_1101-2021_02_08_430275	167	51	the391	the391	LS
10_1101-2021_02_08_430275	167	52	sSNP	ssnp	NN
10_1101-2021_02_08_430275	167	53	/	/	SYM
10_1101-2021_02_08_430275	167	54	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	167	55	ratios	ratio	NNS
10_1101-2021_02_08_430275	167	56	and	and	CC
10_1101-2021_02_08_430275	167	57	the	the	DT
10_1101-2021_02_08_430275	167	58	G	g	NN
10_1101-2021_02_08_430275	167	59	-	-	HYPH
10_1101-2021_02_08_430275	167	60	statistic	statistic	NN
10_1101-2021_02_08_430275	167	61	values	value	NNS
10_1101-2021_02_08_430275	167	62	were	be	VBD
10_1101-2021_02_08_430275	167	63	signifi-392	signifi-392	JJ
10_1101-2021_02_08_430275	167	64	cantly	cantly	RB
10_1101-2021_02_08_430275	167	65	lower	low	JJR
10_1101-2021_02_08_430275	167	66	.	.	.
10_1101-2021_02_08_430275	168	1	The	the	DT
10_1101-2021_02_08_430275	168	2	peak	peak	NN
10_1101-2021_02_08_430275	168	3	sSNP	ssnp	NN
10_1101-2021_02_08_430275	168	4	/	/	SYM
10_1101-2021_02_08_430275	168	5	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	168	6	ratio	ratio	NN
10_1101-2021_02_08_430275	168	7	on	on	IN
10_1101-2021_02_08_430275	168	8	chromosome393	chromosome393	NNP
10_1101-2021_02_08_430275	168	9	11	11	CD
10_1101-2021_02_08_430275	168	10	was	be	VBD
10_1101-2021_02_08_430275	168	11	0.5926	0.5926	CD
10_1101-2021_02_08_430275	168	12	in	in	IN
10_1101-2021_02_08_430275	168	13	Figure	figure	NN
10_1101-2021_02_08_430275	168	14	1b	1b	NN
10_1101-2021_02_08_430275	168	15	,	,	,
10_1101-2021_02_08_430275	168	16	while	while	IN
10_1101-2021_02_08_430275	168	17	it	-PRON-	PRP
10_1101-2021_02_08_430275	168	18	was	be	VBD
10_1101-2021_02_08_430275	168	19	0.3810	0.3810	CD
10_1101-2021_02_08_430275	168	20	in	in	IN
10_1101-2021_02_08_430275	168	21	Figure	Figure	NNP
10_1101-2021_02_08_430275	168	22	2b	2b	NNS
10_1101-2021_02_08_430275	168	23	;	;	:
10_1101-2021_02_08_430275	168	24	it394	it394	NNP
10_1101-2021_02_08_430275	168	25	was	be	VBD
10_1101-2021_02_08_430275	168	26	similar	similar	JJ
10_1101-2021_02_08_430275	168	27	for	for	IN
10_1101-2021_02_08_430275	168	28	the	the	DT
10_1101-2021_02_08_430275	168	29	peak	peak	NN
10_1101-2021_02_08_430275	168	30	G	g	NN
10_1101-2021_02_08_430275	168	31	-	-	HYPH
10_1101-2021_02_08_430275	168	32	statistic	statistic	NN
10_1101-2021_02_08_430275	168	33	values	value	NNS
10_1101-2021_02_08_430275	168	34	.	.	.
10_1101-2021_02_08_430275	169	1	The	the	DT
10_1101-2021_02_08_430275	169	2	decreasing	decrease	VBG
10_1101-2021_02_08_430275	169	3	of395	of395	NNP
10_1101-2021_02_08_430275	169	4	sSNP	ssnp	NN
10_1101-2021_02_08_430275	169	5	/	/	SYM
10_1101-2021_02_08_430275	169	6	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	169	7	ratio	ratio	NN
10_1101-2021_02_08_430275	169	8	and	and	CC
10_1101-2021_02_08_430275	169	9	the	the	DT
10_1101-2021_02_08_430275	169	10	G	g	NN
10_1101-2021_02_08_430275	169	11	-	-	HYPH
10_1101-2021_02_08_430275	169	12	statistic	statistic	NN
10_1101-2021_02_08_430275	169	13	value	value	NN
10_1101-2021_02_08_430275	169	14	is	be	VBZ
10_1101-2021_02_08_430275	169	15	likely	likely	JJ
10_1101-2021_02_08_430275	169	16	caused396	caused396	NN
10_1101-2021_02_08_430275	169	17	by	by	IN
10_1101-2021_02_08_430275	169	18	sequencing	sequence	VBG
10_1101-2021_02_08_430275	169	19	artifacts	artifact	NNS
10_1101-2021_02_08_430275	169	20	and	and	CC
10_1101-2021_02_08_430275	169	21	heterozygosity	heterozygosity	NN
10_1101-2021_02_08_430275	169	22	in	in	IN
10_1101-2021_02_08_430275	169	23	the	the	DT
10_1101-2021_02_08_430275	169	24	parental397	parental397	NN
10_1101-2021_02_08_430275	169	25	lines	line	NNS
10_1101-2021_02_08_430275	169	26	.	.	.
10_1101-2021_02_08_430275	170	1	There	there	EX
10_1101-2021_02_08_430275	170	2	were	be	VBD
10_1101-2021_02_08_430275	170	3	1	1	CD
10_1101-2021_02_08_430275	170	4	345	345	CD
10_1101-2021_02_08_430275	170	5	185	185	CD
10_1101-2021_02_08_430275	170	6	SNPs	snp	NNS
10_1101-2021_02_08_430275	170	7	in	in	IN
10_1101-2021_02_08_430275	170	8	the	the	DT
10_1101-2021_02_08_430275	170	9	bulk	bulk	NN
10_1101-2021_02_08_430275	170	10	dataset	dataset	NN
10_1101-2021_02_08_430275	170	11	when398	when398	PRP
10_1101-2021_02_08_430275	170	12	not	not	RB
10_1101-2021_02_08_430275	170	13	using	use	VBG
10_1101-2021_02_08_430275	170	14	the	the	DT
10_1101-2021_02_08_430275	170	15	parental	parental	JJ
10_1101-2021_02_08_430275	170	16	genome	genome	JJ
10_1101-2021_02_08_430275	170	17	sequences	sequence	NNS
10_1101-2021_02_08_430275	170	18	,	,	,
10_1101-2021_02_08_430275	170	19	while	while	IN
10_1101-2021_02_08_430275	170	20	there	there	EX
10_1101-2021_02_08_430275	170	21	were399	were399	NNP
10_1101-2021_02_08_430275	170	22	1	1	CD
10_1101-2021_02_08_430275	170	23	099	099	CD
10_1101-2021_02_08_430275	170	24	516	516	CD
10_1101-2021_02_08_430275	170	25	SNPs	snp	NNS
10_1101-2021_02_08_430275	170	26	in	in	IN
10_1101-2021_02_08_430275	170	27	the	the	DT
10_1101-2021_02_08_430275	170	28	dataset	dataset	NN
10_1101-2021_02_08_430275	170	29	with	with	IN
10_1101-2021_02_08_430275	170	30	the	the	DT
10_1101-2021_02_08_430275	170	31	aid	aid	NN
10_1101-2021_02_08_430275	170	32	of	of	IN
10_1101-2021_02_08_430275	170	33	the	the	DT
10_1101-2021_02_08_430275	170	34	parental400	parental400	NNP
10_1101-2021_02_08_430275	170	35	genome	genome	NNP
10_1101-2021_02_08_430275	170	36	sequences	sequence	NNS
10_1101-2021_02_08_430275	170	37	.	.	.
10_1101-2021_02_08_430275	171	1	Comparison	comparison	NN
10_1101-2021_02_08_430275	171	2	of	of	IN
10_1101-2021_02_08_430275	171	3	the	the	DT
10_1101-2021_02_08_430275	171	4	two	two	CD
10_1101-2021_02_08_430275	171	5	SNP	SNP	NNP
10_1101-2021_02_08_430275	171	6	dataset	dataset	NN
10_1101-2021_02_08_430275	171	7	re-401	re-401	NNP
10_1101-2021_02_08_430275	171	8	vealed	veale	VBD
10_1101-2021_02_08_430275	171	9	that	that	IN
10_1101-2021_02_08_430275	171	10	109	109	CD
10_1101-2021_02_08_430275	171	11	445	445	CD
10_1101-2021_02_08_430275	171	12	SNPs	snp	NNS
10_1101-2021_02_08_430275	171	13	were	be	VBD
10_1101-2021_02_08_430275	171	14	unique	unique	JJ
10_1101-2021_02_08_430275	171	15	to	to	IN
10_1101-2021_02_08_430275	171	16	the	the	DT
10_1101-2021_02_08_430275	171	17	bulks	bulk	NNS
10_1101-2021_02_08_430275	171	18	.	.	.
10_1101-2021_02_08_430275	172	1	Because402	because402	VB
10_1101-2021_02_08_430275	172	2	all	all	PDT
10_1101-2021_02_08_430275	172	3	the	the	DT
10_1101-2021_02_08_430275	172	4	SNPs	snp	NNS
10_1101-2021_02_08_430275	172	5	in	in	IN
10_1101-2021_02_08_430275	172	6	the	the	DT
10_1101-2021_02_08_430275	172	7	bulks	bulk	NNS
10_1101-2021_02_08_430275	172	8	are	be	VBP
10_1101-2021_02_08_430275	172	9	derived	derive	VBN
10_1101-2021_02_08_430275	172	10	from	from	IN
10_1101-2021_02_08_430275	172	11	the	the	DT
10_1101-2021_02_08_430275	172	12	parental	parental	JJ
10_1101-2021_02_08_430275	172	13	lines,403	lines,403	NNP
10_1101-2021_02_08_430275	172	14	crossing	crossing	NN
10_1101-2021_02_08_430275	172	15	should	should	MD
10_1101-2021_02_08_430275	172	16	not	not	RB
10_1101-2021_02_08_430275	172	17	generate	generate	VB
10_1101-2021_02_08_430275	172	18	new	new	JJ
10_1101-2021_02_08_430275	172	19	SNPs	snp	NNS
10_1101-2021_02_08_430275	172	20	;	;	:
10_1101-2021_02_08_430275	172	21	thus	thus	RB
10_1101-2021_02_08_430275	172	22	this	this	DT
10_1101-2021_02_08_430275	172	23	category404	category404	NNP
10_1101-2021_02_08_430275	172	24	of	of	IN
10_1101-2021_02_08_430275	172	25	SNPs	SNPs	NNP
10_1101-2021_02_08_430275	172	26	was	be	VBD
10_1101-2021_02_08_430275	172	27	most	most	RBS
10_1101-2021_02_08_430275	172	28	likely	likely	RB
10_1101-2021_02_08_430275	172	29	caused	cause	VBN
10_1101-2021_02_08_430275	172	30	by	by	IN
10_1101-2021_02_08_430275	172	31	sequencing	sequence	VBG
10_1101-2021_02_08_430275	172	32	artifacts	artifact	NNS
10_1101-2021_02_08_430275	172	33	.	.	.
10_1101-2021_02_08_430275	173	1	The405	the405	CD
10_1101-2021_02_08_430275	173	2	sequencing	sequencing	NN
10_1101-2021_02_08_430275	173	3	coverage	coverage	NN
10_1101-2021_02_08_430275	173	4	in	in	IN
10_1101-2021_02_08_430275	173	5	the	the	DT
10_1101-2021_02_08_430275	173	6	bulk	bulk	NN
10_1101-2021_02_08_430275	173	7	was	be	VBD
10_1101-2021_02_08_430275	173	8	less	less	JJR
10_1101-2021_02_08_430275	173	9	than	than	IN
10_1101-2021_02_08_430275	173	10	eight	eight	CD
10_1101-2021_02_08_430275	173	11	,	,	,
10_1101-2021_02_08_430275	173	12	which	which	WDT
10_1101-2021_02_08_430275	173	13	is406	is406	NNP
10_1101-2021_02_08_430275	173	14	very	very	RB
10_1101-2021_02_08_430275	173	15	low	low	JJ
10_1101-2021_02_08_430275	173	16	.	.	.
10_1101-2021_02_08_430275	174	1	Higher	high	JJR
10_1101-2021_02_08_430275	174	2	sequencing	sequencing	NN
10_1101-2021_02_08_430275	174	3	coverage	coverage	NN
10_1101-2021_02_08_430275	174	4	would	would	MD
10_1101-2021_02_08_430275	174	5	help	help	VB
10_1101-2021_02_08_430275	174	6	decrease	decrease	VB
10_1101-2021_02_08_430275	174	7	the407	the407	NN
10_1101-2021_02_08_430275	174	8	number	number	NN
10_1101-2021_02_08_430275	174	9	of	of	IN
10_1101-2021_02_08_430275	174	10	SNPs	snp	NNS
10_1101-2021_02_08_430275	174	11	derived	derive	VBN
10_1101-2021_02_08_430275	174	12	from	from	IN
10_1101-2021_02_08_430275	174	13	sequence	sequence	NN
10_1101-2021_02_08_430275	174	14	artifacts	artifact	NNS
10_1101-2021_02_08_430275	174	15	.	.	.
10_1101-2021_02_08_430275	175	1	Additionally,408	Additionally,408	NNP
10_1101-2021_02_08_430275	175	2	137	137	CD
10_1101-2021_02_08_430275	175	3	224	224	CD
10_1101-2021_02_08_430275	175	4	SNP	SNP	NNP
10_1101-2021_02_08_430275	175	5	were	be	VBD
10_1101-2021_02_08_430275	175	6	heterozygous	heterozygous	JJ
10_1101-2021_02_08_430275	175	7	in	in	IN
10_1101-2021_02_08_430275	175	8	the	the	DT
10_1101-2021_02_08_430275	175	9	parental	parental	JJ
10_1101-2021_02_08_430275	175	10	lines	line	NNS
10_1101-2021_02_08_430275	175	11	.	.	.
10_1101-2021_02_08_430275	176	1	Without409	Without409	NNP
10_1101-2021_02_08_430275	176	2	the	the	DT
10_1101-2021_02_08_430275	176	3	parental	parental	JJ
10_1101-2021_02_08_430275	176	4	genome	genome	JJ
10_1101-2021_02_08_430275	176	5	sequences	sequence	NNS
10_1101-2021_02_08_430275	176	6	,	,	,
10_1101-2021_02_08_430275	176	7	this	this	DT
10_1101-2021_02_08_430275	176	8	category	category	NN
10_1101-2021_02_08_430275	176	9	of	of	IN
10_1101-2021_02_08_430275	176	10	SNPs	SNPs	NNPS
10_1101-2021_02_08_430275	176	11	could410	could410	NNP
10_1101-2021_02_08_430275	176	12	not	not	RB
10_1101-2021_02_08_430275	176	13	be	be	VB
10_1101-2021_02_08_430275	176	14	filtered	filter	VBN
10_1101-2021_02_08_430275	176	15	out	out	RP
10_1101-2021_02_08_430275	176	16	from	from	IN
10_1101-2021_02_08_430275	176	17	the	the	DT
10_1101-2021_02_08_430275	176	18	bulk	bulk	JJ
10_1101-2021_02_08_430275	176	19	SNP	SNP	NNP
10_1101-2021_02_08_430275	176	20	dataset	dataset	NN
10_1101-2021_02_08_430275	176	21	.	.	.
10_1101-2021_02_08_430275	177	1	However	however	RB
10_1101-2021_02_08_430275	177	2	,	,	,
10_1101-2021_02_08_430275	177	3	these411	these411	NNP
10_1101-2021_02_08_430275	177	4	SNPs	snp	NNS
10_1101-2021_02_08_430275	177	5	can	can	MD
10_1101-2021_02_08_430275	177	6	be	be	VB
10_1101-2021_02_08_430275	177	7	decreased	decrease	VBN
10_1101-2021_02_08_430275	177	8	via	via	IN
10_1101-2021_02_08_430275	177	9	selfing	selfe	VBG
10_1101-2021_02_08_430275	177	10	the	the	DT
10_1101-2021_02_08_430275	177	11	parental	parental	JJ
10_1101-2021_02_08_430275	177	12	line	line	NN
10_1101-2021_02_08_430275	177	13	more	more	JJR
10_1101-2021_02_08_430275	177	14	gener-412	gener-412	JJ
10_1101-2021_02_08_430275	177	15	ations	ation	NNS
10_1101-2021_02_08_430275	177	16	:	:	:
10_1101-2021_02_08_430275	177	17	five	five	CD
10_1101-2021_02_08_430275	177	18	-	-	HYPH
10_1101-2021_02_08_430275	177	19	generations	generation	NNS
10_1101-2021_02_08_430275	177	20	selfing	selfing	NN
10_1101-2021_02_08_430275	177	21	can	can	MD
10_1101-2021_02_08_430275	177	22	decrease	decrease	VB
10_1101-2021_02_08_430275	177	23	the	the	DT
10_1101-2021_02_08_430275	177	24	heterozygosity413	heterozygosity413	NNP
10_1101-2021_02_08_430275	177	25	of	of	IN
10_1101-2021_02_08_430275	177	26	both	both	CC
10_1101-2021_02_08_430275	177	27	parental	parental	JJ
10_1101-2021_02_08_430275	177	28	lines	line	NNS
10_1101-2021_02_08_430275	177	29	to	to	IN
10_1101-2021_02_08_430275	177	30	a	a	DT
10_1101-2021_02_08_430275	177	31	maximum	maximum	NN
10_1101-2021_02_08_430275	177	32	of	of	IN
10_1101-2021_02_08_430275	177	33	6.25%.414	6.25%.414	CD
10_1101-2021_02_08_430275	177	34	To	to	TO
10_1101-2021_02_08_430275	177	35	determine	determine	VB
10_1101-2021_02_08_430275	177	36	how	how	WRB
10_1101-2021_02_08_430275	177	37	parental	parental	JJ
10_1101-2021_02_08_430275	177	38	heterozygosity	heterozygosity	NN
10_1101-2021_02_08_430275	177	39	and	and	CC
10_1101-2021_02_08_430275	177	40	sequenc-415	sequenc-415	JJ
10_1101-2021_02_08_430275	177	41	ing	ing	NNP
10_1101-2021_02_08_430275	177	42	artifacts	artifact	NNS
10_1101-2021_02_08_430275	177	43	affected	affect	VBD
10_1101-2021_02_08_430275	177	44	the	the	DT
10_1101-2021_02_08_430275	177	45	detection	detection	NN
10_1101-2021_02_08_430275	177	46	of	of	IN
10_1101-2021_02_08_430275	177	47	genomic	genomic	JJ
10_1101-2021_02_08_430275	177	48	region	region	NN
10_1101-2021_02_08_430275	177	49	-	-	HYPH
10_1101-2021_02_08_430275	177	50	trait416	trait416	NNP
10_1101-2021_02_08_430275	177	51	associations	association	NNS
10_1101-2021_02_08_430275	177	52	,	,	,
10_1101-2021_02_08_430275	177	53	we	-PRON-	PRP
10_1101-2021_02_08_430275	177	54	removed	remove	VBD
10_1101-2021_02_08_430275	177	55	the	the	DT
10_1101-2021_02_08_430275	177	56	heterozygous	heterozygous	JJ
10_1101-2021_02_08_430275	177	57	SNPs	snp	NNS
10_1101-2021_02_08_430275	177	58	or	or	CC
10_1101-2021_02_08_430275	177	59	the	the	DT
10_1101-2021_02_08_430275	177	60	bulk-417	bulk-417	NN
10_1101-2021_02_08_430275	177	61	specific	specific	JJ
10_1101-2021_02_08_430275	177	62	SNPs	snp	NNS
10_1101-2021_02_08_430275	177	63	from	from	IN
10_1101-2021_02_08_430275	177	64	the	the	DT
10_1101-2021_02_08_430275	177	65	bulk	bulk	JJ
10_1101-2021_02_08_430275	177	66	SNP	SNP	NNP
10_1101-2021_02_08_430275	177	67	dataset	dataset	NN
10_1101-2021_02_08_430275	177	68	,	,	,
10_1101-2021_02_08_430275	177	69	and	and	CC
10_1101-2021_02_08_430275	177	70	analyzed	analyze	VBD
10_1101-2021_02_08_430275	177	71	the418	the418	JJ
10_1101-2021_02_08_430275	177	72	data	datum	NNS
10_1101-2021_02_08_430275	177	73	separately	separately	RB
10_1101-2021_02_08_430275	177	74	.	.	.
10_1101-2021_02_08_430275	178	1	By	by	IN
10_1101-2021_02_08_430275	178	2	removing	remove	VBG
10_1101-2021_02_08_430275	178	3	the	the	DT
10_1101-2021_02_08_430275	178	4	heterozygous	heterozygous	JJ
10_1101-2021_02_08_430275	178	5	SNPs	snp	NNS
10_1101-2021_02_08_430275	178	6	,	,	,
10_1101-2021_02_08_430275	178	7	the419	the419	ADD
10_1101-2021_02_08_430275	178	8	peak	peak	NN
10_1101-2021_02_08_430275	178	9	on	on	IN
10_1101-2021_02_08_430275	178	10	chromosome	chromosome	NN
10_1101-2021_02_08_430275	178	11	11	11	CD
10_1101-2021_02_08_430275	178	12	was	be	VBD
10_1101-2021_02_08_430275	178	13	shifted	shift	VBN
10_1101-2021_02_08_430275	178	14	to	to	IN
10_1101-2021_02_08_430275	178	15	26.28	26.28	CD
10_1101-2021_02_08_430275	178	16	Mb	Mb	NNP
10_1101-2021_02_08_430275	178	17	for	for	IN
10_1101-2021_02_08_430275	178	18	both420	both420	NNP
10_1101-2021_02_08_430275	178	19	the	the	DT
10_1101-2021_02_08_430275	178	20	sSNP	ssnp	NN
10_1101-2021_02_08_430275	178	21	/	/	SYM
10_1101-2021_02_08_430275	178	22	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	178	23	ratio	ratio	NN
10_1101-2021_02_08_430275	178	24	and	and	CC
10_1101-2021_02_08_430275	178	25	the	the	DT
10_1101-2021_02_08_430275	178	26	G	g	NN
10_1101-2021_02_08_430275	178	27	-	-	HYPH
10_1101-2021_02_08_430275	178	28	statistic	statistic	NN
10_1101-2021_02_08_430275	178	29	value	value	NN
10_1101-2021_02_08_430275	178	30	,	,	,
10_1101-2021_02_08_430275	178	31	and	and	CC
10_1101-2021_02_08_430275	178	32	the421	the421	NN
10_1101-2021_02_08_430275	178	33	sSNP	ssnp	NN
10_1101-2021_02_08_430275	178	34	/	/	SYM
10_1101-2021_02_08_430275	178	35	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	178	36	ratio	ratio	NN
10_1101-2021_02_08_430275	178	37	of	of	IN
10_1101-2021_02_08_430275	178	38	the	the	DT
10_1101-2021_02_08_430275	178	39	peak	peak	NN
10_1101-2021_02_08_430275	178	40	was	be	VBD
10_1101-2021_02_08_430275	178	41	increased	increase	VBN
10_1101-2021_02_08_430275	178	42	to	to	IN
10_1101-2021_02_08_430275	178	43	0.4835,422	0.4835,422	CD
10_1101-2021_02_08_430275	178	44	well	well	RB
10_1101-2021_02_08_430275	178	45	above	above	IN
10_1101-2021_02_08_430275	178	46	the	the	DT
10_1101-2021_02_08_430275	178	47	sliding	slide	VBG
10_1101-2021_02_08_430275	178	48	window	window	NN
10_1101-2021_02_08_430275	178	49	-	-	HYPH
10_1101-2021_02_08_430275	178	50	specific	specific	JJ
10_1101-2021_02_08_430275	178	51	threshold	threshold	NN
10_1101-2021_02_08_430275	178	52	0.0603	0.0603	CD
10_1101-2021_02_08_430275	178	53	.	.	.
10_1101-2021_02_08_430275	179	1	The423	the423	ADD
10_1101-2021_02_08_430275	179	2	G	g	NN
10_1101-2021_02_08_430275	179	3	-	-	HYPH
10_1101-2021_02_08_430275	179	4	statistic	statistic	NN
10_1101-2021_02_08_430275	179	5	value	value	NN
10_1101-2021_02_08_430275	179	6	of	of	IN
10_1101-2021_02_08_430275	179	7	the	the	DT
10_1101-2021_02_08_430275	179	8	peak	peak	NN
10_1101-2021_02_08_430275	179	9	was	be	VBD
10_1101-2021_02_08_430275	179	10	10.8411	10.8411	CD
10_1101-2021_02_08_430275	179	11	,	,	,
10_1101-2021_02_08_430275	179	12	significantly	significantly	RB
10_1101-2021_02_08_430275	179	13	higher424	higher424	NNP
10_1101-2021_02_08_430275	179	14	than	than	IN
10_1101-2021_02_08_430275	179	15	the	the	DT
10_1101-2021_02_08_430275	179	16	threshold	threshold	NN
10_1101-2021_02_08_430275	179	17	8.9532	8.9532	CD
10_1101-2021_02_08_430275	179	18	as	as	RB
10_1101-2021_02_08_430275	179	19	well	well	RB
10_1101-2021_02_08_430275	179	20	.	.	.
10_1101-2021_02_08_430275	180	1	By	by	IN
10_1101-2021_02_08_430275	180	2	removing	remove	VBG
10_1101-2021_02_08_430275	180	3	bulk	bulk	NN
10_1101-2021_02_08_430275	180	4	-	-	HYPH
10_1101-2021_02_08_430275	180	5	specific425	specific425	NN
10_1101-2021_02_08_430275	180	6	SNPs	snp	NNS
10_1101-2021_02_08_430275	180	7	,	,	,
10_1101-2021_02_08_430275	180	8	the	the	DT
10_1101-2021_02_08_430275	180	9	peak	peak	NN
10_1101-2021_02_08_430275	180	10	on	on	IN
10_1101-2021_02_08_430275	180	11	chromosome	chromosome	NN
10_1101-2021_02_08_430275	180	12	11	11	CD
10_1101-2021_02_08_430275	180	13	shifted	shift	VBD
10_1101-2021_02_08_430275	180	14	to	to	IN
10_1101-2021_02_08_430275	180	15	26.49	26.49	CD
10_1101-2021_02_08_430275	180	16	Mb	Mb	NNS
10_1101-2021_02_08_430275	180	17	for426	for426	NNP
10_1101-2021_02_08_430275	180	18	both	both	CC
10_1101-2021_02_08_430275	180	19	the	the	DT
10_1101-2021_02_08_430275	180	20	sSNP	ssnp	NN
10_1101-2021_02_08_430275	180	21	/	/	SYM
10_1101-2021_02_08_430275	180	22	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	180	23	ratio	ratio	NN
10_1101-2021_02_08_430275	180	24	and	and	CC
10_1101-2021_02_08_430275	180	25	the	the	DT
10_1101-2021_02_08_430275	180	26	G	g	NN
10_1101-2021_02_08_430275	180	27	-	-	HYPH
10_1101-2021_02_08_430275	180	28	statistic	statistic	NN
10_1101-2021_02_08_430275	180	29	value	value	NN
10_1101-2021_02_08_430275	180	30	.	.	.
10_1101-2021_02_08_430275	181	1	The427	the427	ADD
10_1101-2021_02_08_430275	181	2	sSNP	sSNP	NNP
10_1101-2021_02_08_430275	181	3	/	/	SYM
10_1101-2021_02_08_430275	181	4	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	181	5	ratio	ratio	NN
10_1101-2021_02_08_430275	181	6	of	of	IN
10_1101-2021_02_08_430275	181	7	the	the	DT
10_1101-2021_02_08_430275	181	8	peak	peak	NN
10_1101-2021_02_08_430275	181	9	and	and	CC
10_1101-2021_02_08_430275	181	10	the	the	DT
10_1101-2021_02_08_430275	181	11	sliding	slide	VBG
10_1101-2021_02_08_430275	181	12	window-428	window-428	NNP
10_1101-2021_02_08_430275	181	13	specific	specific	JJ
10_1101-2021_02_08_430275	181	14	threshold	threshold	NN
10_1101-2021_02_08_430275	181	15	were	be	VBD
10_1101-2021_02_08_430275	181	16	0.4302	0.4302	CD
10_1101-2021_02_08_430275	181	17	and	and	CC
10_1101-2021_02_08_430275	181	18	0.0637	0.0637	CD
10_1101-2021_02_08_430275	181	19	,	,	,
10_1101-2021_02_08_430275	181	20	respectively	respectively	RB
10_1101-2021_02_08_430275	181	21	,	,	,
10_1101-2021_02_08_430275	181	22	and429	and429	NNP
10_1101-2021_02_08_430275	181	23	the	the	DT
10_1101-2021_02_08_430275	181	24	G	g	NN
10_1101-2021_02_08_430275	181	25	-	-	HYPH
10_1101-2021_02_08_430275	181	26	statistic	statistic	NN
10_1101-2021_02_08_430275	181	27	value	value	NN
10_1101-2021_02_08_430275	181	28	of	of	IN
10_1101-2021_02_08_430275	181	29	the	the	DT
10_1101-2021_02_08_430275	181	30	peak	peak	NN
10_1101-2021_02_08_430275	181	31	and	and	CC
10_1101-2021_02_08_430275	181	32	the	the	DT
10_1101-2021_02_08_430275	181	33	threshold	threshold	NN
10_1101-2021_02_08_430275	181	34	were	be	VBD
10_1101-2021_02_08_430275	181	35	9.7591430	9.7591430	CD
10_1101-2021_02_08_430275	181	36	and	and	CC
10_1101-2021_02_08_430275	181	37	8.9092	8.9092	CD
10_1101-2021_02_08_430275	181	38	,	,	,
10_1101-2021_02_08_430275	181	39	respectively	respectively	RB
10_1101-2021_02_08_430275	181	40	.	.	.
10_1101-2021_02_08_430275	182	1	Although	although	IN
10_1101-2021_02_08_430275	182	2	both	both	DT
10_1101-2021_02_08_430275	182	3	the	the	DT
10_1101-2021_02_08_430275	182	4	sSNP	ssnp	NN
10_1101-2021_02_08_430275	182	5	/	/	SYM
10_1101-2021_02_08_430275	182	6	totalSNP431	totalSNP431	NNP
10_1101-2021_02_08_430275	182	7	ratio	ratio	NN
10_1101-2021_02_08_430275	182	8	and	and	CC
10_1101-2021_02_08_430275	182	9	the	the	DT
10_1101-2021_02_08_430275	182	10	G	g	NN
10_1101-2021_02_08_430275	182	11	-	-	HYPH
10_1101-2021_02_08_430275	182	12	statistic	statistic	NN
10_1101-2021_02_08_430275	182	13	value	value	NN
10_1101-2021_02_08_430275	182	14	were	be	VBD
10_1101-2021_02_08_430275	182	15	lower	low	JJR
10_1101-2021_02_08_430275	182	16	than	than	IN
10_1101-2021_02_08_430275	182	17	above	above	RB
10_1101-2021_02_08_430275	182	18	,	,	,
10_1101-2021_02_08_430275	182	19	they432	they432	NN
10_1101-2021_02_08_430275	182	20	were	be	VBD
10_1101-2021_02_08_430275	182	21	still	still	RB
10_1101-2021_02_08_430275	182	22	higher	high	JJR
10_1101-2021_02_08_430275	182	23	than	than	IN
10_1101-2021_02_08_430275	182	24	their	-PRON-	PRP$
10_1101-2021_02_08_430275	182	25	corresponding	correspond	VBG
10_1101-2021_02_08_430275	182	26	thresholds	threshold	NNS
10_1101-2021_02_08_430275	182	27	.	.	.
10_1101-2021_02_08_430275	183	1	While433	While433	NNP
10_1101-2021_02_08_430275	183	2	seemed	seem	VBD
10_1101-2021_02_08_430275	183	3	the	the	DT
10_1101-2021_02_08_430275	183	4	heterozygous	heterozygous	JJ
10_1101-2021_02_08_430275	183	5	SNPs	snp	NNS
10_1101-2021_02_08_430275	183	6	affected	affect	VBD
10_1101-2021_02_08_430275	183	7	the	the	DT
10_1101-2021_02_08_430275	183	8	sSNP	ssnp	NN
10_1101-2021_02_08_430275	183	9	/	/	SYM
10_1101-2021_02_08_430275	183	10	totalSNP434	totalSNP434	NNP
10_1101-2021_02_08_430275	183	11	ratio	ratio	NN
10_1101-2021_02_08_430275	183	12	and	and	CC
10_1101-2021_02_08_430275	183	13	the	the	DT
10_1101-2021_02_08_430275	183	14	G	g	NN
10_1101-2021_02_08_430275	183	15	-	-	HYPH
10_1101-2021_02_08_430275	183	16	statistic	statistic	NN
10_1101-2021_02_08_430275	183	17	value	value	NN
10_1101-2021_02_08_430275	183	18	a	a	DT
10_1101-2021_02_08_430275	183	19	little	little	JJ
10_1101-2021_02_08_430275	183	20	more	more	JJR
10_1101-2021_02_08_430275	183	21	than	than	IN
10_1101-2021_02_08_430275	183	22	the	the	DT
10_1101-2021_02_08_430275	183	23	bulk-435	bulk-435	JJ
10_1101-2021_02_08_430275	183	24	specific	specific	JJ
10_1101-2021_02_08_430275	183	25	SNPs	snp	NNS
10_1101-2021_02_08_430275	183	26	,	,	,
10_1101-2021_02_08_430275	183	27	it	-PRON-	PRP
10_1101-2021_02_08_430275	183	28	is	be	VBZ
10_1101-2021_02_08_430275	183	29	more	more	RBR
10_1101-2021_02_08_430275	183	30	likely	likely	JJ
10_1101-2021_02_08_430275	183	31	that	that	IN
10_1101-2021_02_08_430275	183	32	both	both	DT
10_1101-2021_02_08_430275	183	33	produced	produce	VBD
10_1101-2021_02_08_430275	183	34	similar436	similar436	NN
10_1101-2021_02_08_430275	183	35	levels	level	NNS
10_1101-2021_02_08_430275	183	36	of	of	IN
10_1101-2021_02_08_430275	183	37	noise	noise	NN
10_1101-2021_02_08_430275	183	38	for	for	IN
10_1101-2021_02_08_430275	183	39	the	the	DT
10_1101-2021_02_08_430275	183	40	sSNP	ssnp	NN
10_1101-2021_02_08_430275	183	41	/	/	SYM
10_1101-2021_02_08_430275	183	42	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	183	43	ratio	ratio	NN
10_1101-2021_02_08_430275	183	44	and	and	CC
10_1101-2021_02_08_430275	183	45	the	the	DT
10_1101-2021_02_08_430275	183	46	G	G	NNP
10_1101-2021_02_08_430275	183	47	-	-	HYPH
10_1101-2021_02_08_430275	183	48	statistic437	statistic437	NNP
10_1101-2021_02_08_430275	183	49	value	value	NN
10_1101-2021_02_08_430275	183	50	considering	consider	VBG
10_1101-2021_02_08_430275	183	51	that	that	IN
10_1101-2021_02_08_430275	183	52	the	the	DT
10_1101-2021_02_08_430275	183	53	former	former	JJ
10_1101-2021_02_08_430275	183	54	was	be	VBD
10_1101-2021_02_08_430275	183	55	27	27	CD
10_1101-2021_02_08_430275	183	56	779	779	CD
10_1101-2021_02_08_430275	183	57	greater	great	JJR
10_1101-2021_02_08_430275	183	58	than438	than438	XX
10_1101-2021_02_08_430275	183	59	the	the	DT
10_1101-2021_02_08_430275	183	60	latter	latter	JJ
10_1101-2021_02_08_430275	183	61	.	.	.
10_1101-2021_02_08_430275	184	1	When	when	WRB
10_1101-2021_02_08_430275	184	2	using	use	VBG
10_1101-2021_02_08_430275	184	3	only	only	RB
10_1101-2021_02_08_430275	184	4	the	the	DT
10_1101-2021_02_08_430275	184	5	bulk	bulk	JJ
10_1101-2021_02_08_430275	184	6	genome	genome	JJ
10_1101-2021_02_08_430275	184	7	sequences	sequence	NNS
10_1101-2021_02_08_430275	184	8	,	,	,
10_1101-2021_02_08_430275	184	9	the439	the439	JJS
10_1101-2021_02_08_430275	184	10	sSNP	ssnp	NN
10_1101-2021_02_08_430275	184	11	/	/	SYM
10_1101-2021_02_08_430275	184	12	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	184	13	peak	peak	NN
10_1101-2021_02_08_430275	184	14	position	position	NN
10_1101-2021_02_08_430275	184	15	on	on	IN
10_1101-2021_02_08_430275	184	16	chromosome	chromosome	NN
10_1101-2021_02_08_430275	184	17	11	11	CD
10_1101-2021_02_08_430275	184	18	was	be	VBD
10_1101-2021_02_08_430275	184	19	shifted440	shifted440	NNP
10_1101-2021_02_08_430275	184	20	0.52	0.52	CD
10_1101-2021_02_08_430275	184	21	Mb	Mb	NNP
10_1101-2021_02_08_430275	184	22	(	(	-LRB-
10_1101-2021_02_08_430275	184	23	26.44	26.44	CD
10_1101-2021_02_08_430275	184	24	Mb	mb	NN
10_1101-2021_02_08_430275	184	25	to	to	IN
10_1101-2021_02_08_430275	184	26	26.96	26.96	CD
10_1101-2021_02_08_430275	184	27	Mb	Mb	NNS
10_1101-2021_02_08_430275	184	28	)	)	-RRB-
10_1101-2021_02_08_430275	184	29	due	due	IN
10_1101-2021_02_08_430275	184	30	to	to	IN
10_1101-2021_02_08_430275	184	31	the	the	DT
10_1101-2021_02_08_430275	184	32	presence	presence	NN
10_1101-2021_02_08_430275	184	33	of	of	IN
10_1101-2021_02_08_430275	184	34	the441	the441	JJ
10_1101-2021_02_08_430275	184	35	bulk	bulk	JJ
10_1101-2021_02_08_430275	184	36	-	-	HYPH
10_1101-2021_02_08_430275	184	37	specific	specific	JJ
10_1101-2021_02_08_430275	184	38	SNPs	snp	NNS
10_1101-2021_02_08_430275	184	39	and	and	CC
10_1101-2021_02_08_430275	184	40	the	the	DT
10_1101-2021_02_08_430275	184	41	heterozygous	heterozygous	JJ
10_1101-2021_02_08_430275	184	42	SNPs	snp	NNS
10_1101-2021_02_08_430275	184	43	in	in	IN
10_1101-2021_02_08_430275	184	44	the	the	DT
10_1101-2021_02_08_430275	184	45	dataset,442	dataset,442	NN
10_1101-2021_02_08_430275	184	46	but	but	CC
10_1101-2021_02_08_430275	184	47	this	this	DT
10_1101-2021_02_08_430275	184	48	is	be	VBZ
10_1101-2021_02_08_430275	184	49	a	a	DT
10_1101-2021_02_08_430275	184	50	very	very	RB
10_1101-2021_02_08_430275	184	51	short	short	JJ
10_1101-2021_02_08_430275	184	52	distance	distance	NN
10_1101-2021_02_08_430275	184	53	for	for	IN
10_1101-2021_02_08_430275	184	54	genetic	genetic	JJ
10_1101-2021_02_08_430275	184	55	mapping	mapping	NN
10_1101-2021_02_08_430275	184	56	.	.	.
10_1101-2021_02_08_430275	185	1	Although443	Although443	NNP
10_1101-2021_02_08_430275	185	2	only	only	RB
10_1101-2021_02_08_430275	185	3	a	a	DT
10_1101-2021_02_08_430275	185	4	single	single	JJ
10_1101-2021_02_08_430275	185	5	dataset	dataset	NN
10_1101-2021_02_08_430275	185	6	was	be	VBD
10_1101-2021_02_08_430275	185	7	examined	examine	VBN
10_1101-2021_02_08_430275	185	8	here	here	RB
10_1101-2021_02_08_430275	185	9	,	,	,
10_1101-2021_02_08_430275	185	10	the	the	DT
10_1101-2021_02_08_430275	185	11	genome	genome	NN
10_1101-2021_02_08_430275	185	12	-	-	HYPH
10_1101-2021_02_08_430275	185	13	wide444	wide444	NN
10_1101-2021_02_08_430275	185	14	similarity	similarity	NN
10_1101-2021_02_08_430275	185	15	of	of	IN
10_1101-2021_02_08_430275	185	16	the	the	DT
10_1101-2021_02_08_430275	185	17	sSNP	ssnp	NN
10_1101-2021_02_08_430275	185	18	/	/	SYM
10_1101-2021_02_08_430275	185	19	totalSNP	totalsnp	JJ
10_1101-2021_02_08_430275	185	20	curve	curve	NN
10_1101-2021_02_08_430275	185	21	patterns	pattern	NNS
10_1101-2021_02_08_430275	185	22	in	in	IN
10_1101-2021_02_08_430275	185	23	Figure	figure	NN
10_1101-2021_02_08_430275	185	24	1b445	1b445	CD
10_1101-2021_02_08_430275	185	25	and	and	CC
10_1101-2021_02_08_430275	185	26	Figure	Figure	NNP
10_1101-2021_02_08_430275	185	27	2b	2b	NNP
10_1101-2021_02_08_430275	185	28	suggests	suggest	VBZ
10_1101-2021_02_08_430275	185	29	that	that	IN
10_1101-2021_02_08_430275	185	30	the	the	DT
10_1101-2021_02_08_430275	185	31	significant	significant	JJ
10_1101-2021_02_08_430275	185	32	structural	structural	JJ
10_1101-2021_02_08_430275	185	33	method446	method446	NNP
10_1101-2021_02_08_430275	185	34	is	be	VBZ
10_1101-2021_02_08_430275	185	35	highly	highly	RB
10_1101-2021_02_08_430275	185	36	reproducible	reproducible	JJ
10_1101-2021_02_08_430275	185	37	using	use	VBG
10_1101-2021_02_08_430275	185	38	only	only	RB
10_1101-2021_02_08_430275	185	39	the	the	DT
10_1101-2021_02_08_430275	185	40	bulk	bulk	NN
10_1101-2021_02_08_430275	185	41	genome	genome	NN
10_1101-2021_02_08_430275	185	42	sequences.447	sequences.447	NNP
10_1101-2021_02_08_430275	185	43	Conclusions	Conclusions	NNPS
10_1101-2021_02_08_430275	185	44	448	448	CD
10_1101-2021_02_08_430275	185	45	The	the	DT
10_1101-2021_02_08_430275	185	46	plotting	plot	VBG
10_1101-2021_02_08_430275	185	47	pattern	pattern	NN
10_1101-2021_02_08_430275	185	48	of	of	IN
10_1101-2021_02_08_430275	185	49	the	the	DT
10_1101-2021_02_08_430275	185	50	ΔAF	δaf	NN
10_1101-2021_02_08_430275	185	51	values	value	NNS
10_1101-2021_02_08_430275	185	52	in	in	IN
10_1101-2021_02_08_430275	185	53	the	the	DT
10_1101-2021_02_08_430275	185	54	trait	trait	NN
10_1101-2021_02_08_430275	185	55	-	-	HYPH
10_1101-2021_02_08_430275	185	56	associated	associate	VBN
10_1101-2021_02_08_430275	185	57	449	449	CD
10_1101-2021_02_08_430275	185	58	genomic	genomic	JJ
10_1101-2021_02_08_430275	185	59	region	region	NN
10_1101-2021_02_08_430275	185	60	was	be	VBD
10_1101-2021_02_08_430275	185	61	very	very	RB
10_1101-2021_02_08_430275	185	62	different	different	JJ
10_1101-2021_02_08_430275	185	63	when	when	WRB
10_1101-2021_02_08_430275	185	64	using	use	VBG
10_1101-2021_02_08_430275	185	65	only	only	RB
10_1101-2021_02_08_430275	185	66	the	the	DT
10_1101-2021_02_08_430275	185	67	bulk	bulk	JJ
10_1101-2021_02_08_430275	185	68	450	450	CD
10_1101-2021_02_08_430275	185	69	genome	genome	JJ
10_1101-2021_02_08_430275	185	70	sequences	sequence	NNS
10_1101-2021_02_08_430275	185	71	.	.	.
10_1101-2021_02_08_430275	186	1	Without	without	IN
10_1101-2021_02_08_430275	186	2	the	the	DT
10_1101-2021_02_08_430275	186	3	aid	aid	NN
10_1101-2021_02_08_430275	186	4	of	of	IN
10_1101-2021_02_08_430275	186	5	the	the	DT
10_1101-2021_02_08_430275	186	6	parental	parental	JJ
10_1101-2021_02_08_430275	186	7	genome	genome	NNP
10_1101-2021_02_08_430275	186	8	451	451	CD
10_1101-2021_02_08_430275	186	9	sequences	sequence	NNS
10_1101-2021_02_08_430275	186	10	,	,	,
10_1101-2021_02_08_430275	186	11	the	the	DT
10_1101-2021_02_08_430275	186	12	ΔAF	δaf	NN
10_1101-2021_02_08_430275	186	13	values	value	NNS
10_1101-2021_02_08_430275	186	14	of	of	IN
10_1101-2021_02_08_430275	186	15	the	the	DT
10_1101-2021_02_08_430275	186	16	sliding	slide	VBG
10_1101-2021_02_08_430275	186	17	windows	window	NNS
10_1101-2021_02_08_430275	186	18	could	could	MD
10_1101-2021_02_08_430275	186	19	not	not	RB
10_1101-2021_02_08_430275	186	20	452	452	CD
10_1101-2021_02_08_430275	186	21	be	be	VB
10_1101-2021_02_08_430275	186	22	correctly	correctly	RB
10_1101-2021_02_08_430275	186	23	calculated	calculate	VBN
10_1101-2021_02_08_430275	186	24	;	;	:
10_1101-2021_02_08_430275	186	25	thus	thus	RB
10_1101-2021_02_08_430275	186	26	,	,	,
10_1101-2021_02_08_430275	186	27	the	the	DT
10_1101-2021_02_08_430275	186	28	allele	allele	NNP
10_1101-2021_02_08_430275	186	29	frequency	frequency	NN
10_1101-2021_02_08_430275	186	30	method	method	NN
10_1101-2021_02_08_430275	186	31	453	453	CD
10_1101-2021_02_08_430275	186	32	can	can	MD
10_1101-2021_02_08_430275	186	33	not	not	RB
10_1101-2021_02_08_430275	186	34	be	be	VB
10_1101-2021_02_08_430275	186	35	used	use	VBN
10_1101-2021_02_08_430275	186	36	to	to	TO
10_1101-2021_02_08_430275	186	37	identify	identify	VB
10_1101-2021_02_08_430275	186	38	SNP	SNP	NNP
10_1101-2021_02_08_430275	186	39	-	-	HYPH
10_1101-2021_02_08_430275	186	40	trait	trait	NNP
10_1101-2021_02_08_430275	186	41	association	association	NNP
10_1101-2021_02_08_430275	186	42	.	.	.
10_1101-2021_02_08_430275	187	1	In	in	IN
10_1101-2021_02_08_430275	187	2	contrast	contrast	NN
10_1101-2021_02_08_430275	187	3	,	,	,
10_1101-2021_02_08_430275	187	4	454	454	CD
10_1101-2021_02_08_430275	187	5	the	the	DT
10_1101-2021_02_08_430275	187	6	parental	parental	JJ
10_1101-2021_02_08_430275	187	7	genome	genome	JJ
10_1101-2021_02_08_430275	187	8	sequence	sequence	NN
10_1101-2021_02_08_430275	187	9	does	do	VBZ
10_1101-2021_02_08_430275	187	10	not	not	RB
10_1101-2021_02_08_430275	187	11	affect	affect	VB
10_1101-2021_02_08_430275	187	12	the	the	DT
10_1101-2021_02_08_430275	187	13	plotting	plot	VBG
10_1101-2021_02_08_430275	187	14	455	455	CD
10_1101-2021_02_08_430275	187	15	patterns	pattern	NNS
10_1101-2021_02_08_430275	187	16	of	of	IN
10_1101-2021_02_08_430275	187	17	both	both	CC
10_1101-2021_02_08_430275	187	18	the	the	DT
10_1101-2021_02_08_430275	187	19	significant	significant	JJ
10_1101-2021_02_08_430275	187	20	structural	structural	JJ
10_1101-2021_02_08_430275	187	21	variant	variant	JJ
10_1101-2021_02_08_430275	187	22	method	method	NN
10_1101-2021_02_08_430275	187	23	and	and	CC
10_1101-2021_02_08_430275	187	24	456	456	CD
10_1101-2021_02_08_430275	187	25	the	the	DT
10_1101-2021_02_08_430275	187	26	G	g	NN
10_1101-2021_02_08_430275	187	27	-	-	HYPH
10_1101-2021_02_08_430275	187	28	statistic	statistic	NN
10_1101-2021_02_08_430275	187	29	method	method	NN
10_1101-2021_02_08_430275	187	30	,	,	,
10_1101-2021_02_08_430275	187	31	but	but	CC
10_1101-2021_02_08_430275	187	32	the	the	DT
10_1101-2021_02_08_430275	187	33	sSNP	ssnp	NN
10_1101-2021_02_08_430275	187	34	/	/	SYM
10_1101-2021_02_08_430275	187	35	totalSNP	totalSNP	NNP
10_1101-2021_02_08_430275	187	36	ratios	ratio	NNS
10_1101-2021_02_08_430275	187	37	and	and	CC
10_1101-2021_02_08_430275	187	38	the	the	DT
10_1101-2021_02_08_430275	187	39	457	457	CD
10_1101-2021_02_08_430275	187	40	G	g	NN
10_1101-2021_02_08_430275	187	41	-	-	HYPH
10_1101-2021_02_08_430275	187	42	statistic	statistic	NN
10_1101-2021_02_08_430275	187	43	values	value	NNS
10_1101-2021_02_08_430275	187	44	decreased	decrease	VBD
10_1101-2021_02_08_430275	187	45	significantly	significantly	RB
10_1101-2021_02_08_430275	187	46	due	due	IN
10_1101-2021_02_08_430275	187	47	to	to	IN
10_1101-2021_02_08_430275	187	48	sequencing	sequence	VBG
10_1101-2021_02_08_430275	187	49	458	458	CD
10_1101-2021_02_08_430275	187	50	artifacts	artifact	NNS
10_1101-2021_02_08_430275	187	51	and/or	and/or	CC
10_1101-2021_02_08_430275	187	52	heterozygosity	heterozygosity	NN
10_1101-2021_02_08_430275	187	53	of	of	IN
10_1101-2021_02_08_430275	187	54	the	the	DT
10_1101-2021_02_08_430275	187	55	parental	parental	JJ
10_1101-2021_02_08_430275	187	56	lines	line	NNS
10_1101-2021_02_08_430275	187	57	.	.	.
10_1101-2021_02_08_430275	188	1	Because	because	IN
10_1101-2021_02_08_430275	188	2	459	459	CD
10_1101-2021_02_08_430275	188	3	of	of	IN
10_1101-2021_02_08_430275	188	4	its	-PRON-	PRP$
10_1101-2021_02_08_430275	188	5	high	high	JJ
10_1101-2021_02_08_430275	188	6	detection	detection	NN
10_1101-2021_02_08_430275	188	7	power	power	NN
10_1101-2021_02_08_430275	188	8	,	,	,
10_1101-2021_02_08_430275	188	9	major	major	JJ
10_1101-2021_02_08_430275	188	10	SNP	SNP	NNP
10_1101-2021_02_08_430275	188	11	-	-	HYPH
10_1101-2021_02_08_430275	188	12	trait	trait	NN
10_1101-2021_02_08_430275	188	13	associations	association	NNS
10_1101-2021_02_08_430275	188	14	can	can	MD
10_1101-2021_02_08_430275	188	15	460	460	CD
10_1101-2021_02_08_430275	188	16	still	still	RB
10_1101-2021_02_08_430275	188	17	be	be	VB
10_1101-2021_02_08_430275	188	18	reliably	reliably	RB
10_1101-2021_02_08_430275	188	19	detected	detect	VBN
10_1101-2021_02_08_430275	188	20	via	via	IN
10_1101-2021_02_08_430275	188	21	the	the	DT
10_1101-2021_02_08_430275	188	22	significant	significant	JJ
10_1101-2021_02_08_430275	188	23	structural	structural	JJ
10_1101-2021_02_08_430275	188	24	variant	variant	JJ
10_1101-2021_02_08_430275	188	25	461	461	CD
10_1101-2021_02_08_430275	188	26	method	method	NN
10_1101-2021_02_08_430275	188	27	even	even	RB
10_1101-2021_02_08_430275	188	28	the	the	DT
10_1101-2021_02_08_430275	188	29	sequence	sequence	NN
10_1101-2021_02_08_430275	188	30	coverage	coverage	NN
10_1101-2021_02_08_430275	188	31	was	be	VBD
10_1101-2021_02_08_430275	188	32	very	very	RB
10_1101-2021_02_08_430275	188	33	low	low	JJ
10_1101-2021_02_08_430275	188	34	.	.	.
10_1101-2021_02_08_430275	189	1	462	462	CD
10_1101-2021_02_08_430275	189	2	Acknowledgments	acknowledgment	NNS
10_1101-2021_02_08_430275	189	3	.	.	.
10_1101-2021_02_08_430275	190	1	JZ	JZ	NNP
10_1101-2021_02_08_430275	190	2	was	be	VBD
10_1101-2021_02_08_430275	190	3	supported	support	VBN
10_1101-2021_02_08_430275	190	4	by	by	IN
10_1101-2021_02_08_430275	190	5	the	the	DT
10_1101-2021_02_08_430275	190	6	National	National	NNP
10_1101-2021_02_08_430275	190	7	Science	Science	NNP
10_1101-2021_02_08_430275	190	8	463	463	CD
10_1101-2021_02_08_430275	190	9	Foundation	Foundation	NNP
10_1101-2021_02_08_430275	190	10	grant	grant	NN
10_1101-2021_02_08_430275	190	11	[	[	-LRB-
10_1101-2021_02_08_430275	190	12	IOS-1546625	IOS-1546625	NNP
10_1101-2021_02_08_430275	190	13	to	to	IN
10_1101-2021_02_08_430275	190	14	DRP	DRP	NNP
10_1101-2021_02_08_430275	190	15	]	]	-RRB-
10_1101-2021_02_08_430275	190	16	.	.	.
10_1101-2021_02_08_430275	191	1	We	-PRON-	PRP
10_1101-2021_02_08_430275	191	2	are	be	VBP
10_1101-2021_02_08_430275	191	3	grateful	grateful	JJ
10_1101-2021_02_08_430275	191	4	to	to	IN
10_1101-2021_02_08_430275	191	5	Lahari	Lahari	NNP
10_1101-2021_02_08_430275	191	6	464	464	CD
10_1101-2021_02_08_430275	191	7	et	et	FW
10_1101-2021_02_08_430275	191	8	al	al	NNP
10_1101-2021_02_08_430275	191	9	.	.	.
10_1101-2021_02_08_430275	192	1	for	for	IN
10_1101-2021_02_08_430275	192	2	generating	generate	VBG
10_1101-2021_02_08_430275	192	3	the	the	DT
10_1101-2021_02_08_430275	192	4	sequencing	sequence	VBG
10_1101-2021_02_08_430275	192	5	data	datum	NNS
10_1101-2021_02_08_430275	192	6	and	and	CC
10_1101-2021_02_08_430275	192	7	making	make	VBG
10_1101-2021_02_08_430275	192	8	it	-PRON-	PRP
10_1101-2021_02_08_430275	192	9	available	available	JJ
10_1101-2021_02_08_430275	192	10	465	465	CD
10_1101-2021_02_08_430275	192	11	to	to	IN
10_1101-2021_02_08_430275	192	12	the	the	DT
10_1101-2021_02_08_430275	192	13	public	public	NN
10_1101-2021_02_08_430275	192	14	.	.	.
10_1101-2021_02_08_430275	193	1	We	-PRON-	PRP
10_1101-2021_02_08_430275	193	2	thank	thank	VBP
10_1101-2021_02_08_430275	193	3	Irene	Irene	NNP
10_1101-2021_02_08_430275	193	4	E.	E.	NNP
10_1101-2021_02_08_430275	193	5	Palmer	Palmer	NNP
10_1101-2021_02_08_430275	193	6	for	for	IN
10_1101-2021_02_08_430275	193	7	critical	critical	JJ
10_1101-2021_02_08_430275	193	8	review	review	NN
10_1101-2021_02_08_430275	193	9	and	and	CC
10_1101-2021_02_08_430275	193	10	466	466	CD
10_1101-2021_02_08_430275	193	11	thank	thank	VBP
10_1101-2021_02_08_430275	193	12	Nathan	Nathan	NNP
10_1101-2021_02_08_430275	193	13	Lynch	Lynch	NNP
10_1101-2021_02_08_430275	193	14	for	for	IN
10_1101-2021_02_08_430275	193	15	valuable	valuable	JJ
10_1101-2021_02_08_430275	193	16	comments	comment	NNS
10_1101-2021_02_08_430275	193	17	.	.	.
10_1101-2021_02_08_430275	194	1	The	the	DT
10_1101-2021_02_08_430275	194	2	manuscript	manuscript	NN
10_1101-2021_02_08_430275	194	3	was	be	VBD
10_1101-2021_02_08_430275	194	4	467	467	CD
10_1101-2021_02_08_430275	194	5	prepared	prepare	VBN
10_1101-2021_02_08_430275	194	6	using	use	VBG
10_1101-2021_02_08_430275	194	7	a	a	DT
10_1101-2021_02_08_430275	194	8	modified	modify	VBN
10_1101-2021_02_08_430275	194	9	version	version	NN
10_1101-2021_02_08_430275	194	10	of	of	IN
10_1101-2021_02_08_430275	194	11	the	the	DT
10_1101-2021_02_08_430275	194	12	PNAS	PNAS	NNP
10_1101-2021_02_08_430275	194	13	LATEX	LATEX	NNP
10_1101-2021_02_08_430275	194	14	template	template	NN
10_1101-2021_02_08_430275	194	15	.	.	.
10_1101-2021_02_08_430275	195	1	468	468	CD
10_1101-2021_02_08_430275	195	2	Bibliography	Bibliography	NNP
10_1101-2021_02_08_430275	195	3	469	469	CD
10_1101-2021_02_08_430275	195	4	1	1	CD
10_1101-2021_02_08_430275	195	5	.	.	.
10_1101-2021_02_08_430275	196	1	RW	RW	NNP
10_1101-2021_02_08_430275	196	2	Michelmore	Michelmore	NNP
10_1101-2021_02_08_430275	196	3	,	,	,
10_1101-2021_02_08_430275	196	4	I	-PRON-	PRP
10_1101-2021_02_08_430275	196	5	Paran	Paran	NNP
10_1101-2021_02_08_430275	196	6	,	,	,
10_1101-2021_02_08_430275	196	7	RV	RV	NNP
10_1101-2021_02_08_430275	196	8	Kesseli	Kesseli	NNP
10_1101-2021_02_08_430275	196	9	,	,	,
10_1101-2021_02_08_430275	196	10	Identification	identification	NN
10_1101-2021_02_08_430275	196	11	of	of	IN
10_1101-2021_02_08_430275	196	12	markers	marker	NNS
10_1101-2021_02_08_430275	196	13	linked	link	VBN
10_1101-2021_02_08_430275	196	14	to	to	IN
10_1101-2021_02_08_430275	196	15	disease	disease	NN
10_1101-2021_02_08_430275	196	16	-	-	HYPH
10_1101-2021_02_08_430275	196	17	resistance	resistance	NN
10_1101-2021_02_08_430275	196	18	470	470	CD
10_1101-2021_02_08_430275	196	19	genes	gene	NNS
10_1101-2021_02_08_430275	196	20	by	by	IN
10_1101-2021_02_08_430275	196	21	bulked	bulk	VBN
10_1101-2021_02_08_430275	196	22	segregant	segregant	NNP
10_1101-2021_02_08_430275	196	23	analysis	analysis	NNP
10_1101-2021_02_08_430275	196	24	:	:	:
10_1101-2021_02_08_430275	196	25	a	a	DT
10_1101-2021_02_08_430275	196	26	rapid	rapid	JJ
10_1101-2021_02_08_430275	196	27	method	method	NN
10_1101-2021_02_08_430275	196	28	to	to	TO
10_1101-2021_02_08_430275	196	29	detect	detect	VB
10_1101-2021_02_08_430275	196	30	markers	marker	NNS
10_1101-2021_02_08_430275	196	31	in	in	IN
10_1101-2021_02_08_430275	196	32	specific	specific	JJ
10_1101-2021_02_08_430275	196	33	genomic	genomic	NN
10_1101-2021_02_08_430275	196	34	re-	re-	XX
10_1101-2021_02_08_430275	196	35	471	471	CD
10_1101-2021_02_08_430275	196	36	gions	gion	NNS
10_1101-2021_02_08_430275	196	37	by	by	IN
10_1101-2021_02_08_430275	196	38	using	use	VBG
10_1101-2021_02_08_430275	196	39	segregating	segregating	NN
10_1101-2021_02_08_430275	196	40	populations	population	NNS
10_1101-2021_02_08_430275	196	41	.	.	.
10_1101-2021_02_08_430275	197	1	Proc	Proc	NNP
10_1101-2021_02_08_430275	197	2	.	.	.
10_1101-2021_02_08_430275	198	1	Natl	Natl	NNP
10_1101-2021_02_08_430275	198	2	.	.	.
10_1101-2021_02_08_430275	199	1	Acad	Acad	NNS
10_1101-2021_02_08_430275	199	2	.	.	.
10_1101-2021_02_08_430275	200	1	Sci	Sci	NNP
10_1101-2021_02_08_430275	200	2	.	.	.
10_1101-2021_02_08_430275	201	1	U.S.A.	U.S.A.	NNP
10_1101-2021_02_08_430275	201	2	88	88	CD
10_1101-2021_02_08_430275	201	3	,	,	,
10_1101-2021_02_08_430275	201	4	9828–9832	9828–9832	CD
10_1101-2021_02_08_430275	201	5	(	(	-LRB-
10_1101-2021_02_08_430275	201	6	1991	1991	CD
10_1101-2021_02_08_430275	201	7	)	)	-RRB-
10_1101-2021_02_08_430275	201	8	.	.	.
10_1101-2021_02_08_430275	202	1	472	472	CD
10_1101-2021_02_08_430275	202	2	2	2	CD
10_1101-2021_02_08_430275	202	3	.	.	.
10_1101-2021_02_08_430275	203	1	JJ	JJ	NNP
10_1101-2021_02_08_430275	203	2	Giovannoni	Giovannoni	NNP
10_1101-2021_02_08_430275	203	3	,	,	,
10_1101-2021_02_08_430275	203	4	RA	RA	NNP
10_1101-2021_02_08_430275	203	5	Wing	Wing	NNP
10_1101-2021_02_08_430275	203	6	,	,	,
10_1101-2021_02_08_430275	203	7	MW	MW	NNP
10_1101-2021_02_08_430275	203	8	Ganal	Ganal	NNP
10_1101-2021_02_08_430275	203	9	,	,	,
10_1101-2021_02_08_430275	203	10	SD	SD	NNP
10_1101-2021_02_08_430275	203	11	Tanksley	Tanksley	NNP
10_1101-2021_02_08_430275	203	12	,	,	,
10_1101-2021_02_08_430275	203	13	Isolation	isolation	NN
10_1101-2021_02_08_430275	203	14	of	of	IN
10_1101-2021_02_08_430275	203	15	molecular	molecular	JJ
10_1101-2021_02_08_430275	203	16	markers	marker	NNS
10_1101-2021_02_08_430275	203	17	from	from	IN
10_1101-2021_02_08_430275	203	18	spe-	spe-	RB
10_1101-2021_02_08_430275	203	19	473	473	CD
10_1101-2021_02_08_430275	203	20	cific	cific	JJ
10_1101-2021_02_08_430275	203	21	chromosomal	chromosomal	NN
10_1101-2021_02_08_430275	203	22	intervals	interval	NNS
10_1101-2021_02_08_430275	203	23	using	use	VBG
10_1101-2021_02_08_430275	203	24	DNA	dna	NN
10_1101-2021_02_08_430275	203	25	pools	pool	NNS
10_1101-2021_02_08_430275	203	26	from	from	IN
10_1101-2021_02_08_430275	203	27	existing	exist	VBG
10_1101-2021_02_08_430275	203	28	mapping	mapping	NN
10_1101-2021_02_08_430275	203	29	populations	population	NNS
10_1101-2021_02_08_430275	203	30	.	.	.
10_1101-2021_02_08_430275	204	1	Nucleic	Nucleic	NNP
10_1101-2021_02_08_430275	204	2	474	474	CD
10_1101-2021_02_08_430275	204	3	Acids	Acids	NNPS
10_1101-2021_02_08_430275	204	4	Res	Res	NNP
10_1101-2021_02_08_430275	204	5	19	19	CD
10_1101-2021_02_08_430275	204	6	,	,	,
10_1101-2021_02_08_430275	204	7	6553–6568	6553–6568	CD
10_1101-2021_02_08_430275	204	8	(	(	-LRB-
10_1101-2021_02_08_430275	204	9	1991	1991	CD
10_1101-2021_02_08_430275	204	10	)	)	-RRB-
10_1101-2021_02_08_430275	204	11	.	.	.
10_1101-2021_02_08_430275	205	1	475	475	CD
10_1101-2021_02_08_430275	205	2	3	3	CD
10_1101-2021_02_08_430275	205	3	.	.	.
10_1101-2021_02_08_430275	206	1	I	-PRON-	PRP
10_1101-2021_02_08_430275	206	2	Imerovski	Imerovski	NNP
10_1101-2021_02_08_430275	206	3	,	,	,
10_1101-2021_02_08_430275	206	4	et	et	NNP
10_1101-2021_02_08_430275	206	5	al	al	NNP
10_1101-2021_02_08_430275	206	6	.	.	NNP
10_1101-2021_02_08_430275	206	7	,	,	,
10_1101-2021_02_08_430275	206	8	BSA	BSA	NNP
10_1101-2021_02_08_430275	206	9	-	-	HYPH
10_1101-2021_02_08_430275	206	10	seq	seq	NN
10_1101-2021_02_08_430275	206	11	mapping	mapping	NN
10_1101-2021_02_08_430275	206	12	reveals	reveal	VBZ
10_1101-2021_02_08_430275	206	13	major	major	JJ
10_1101-2021_02_08_430275	206	14	QTL	QTL	NNP
10_1101-2021_02_08_430275	206	15	for	for	IN
10_1101-2021_02_08_430275	206	16	broomrape	broomrape	JJ
10_1101-2021_02_08_430275	206	17	resistance	resistance	NN
10_1101-2021_02_08_430275	206	18	in	in	IN
10_1101-2021_02_08_430275	206	19	four	four	CD
10_1101-2021_02_08_430275	206	20	476	476	CD
10_1101-2021_02_08_430275	206	21	sunflower	sunflower	NN
10_1101-2021_02_08_430275	206	22	lines	line	NNS
10_1101-2021_02_08_430275	206	23	.	.	.
10_1101-2021_02_08_430275	207	1	Mol	Mol	NNP
10_1101-2021_02_08_430275	207	2	Breed	Breed	NNP
10_1101-2021_02_08_430275	207	3	.	.	.
10_1101-2021_02_08_430275	208	1	39	39	CD
10_1101-2021_02_08_430275	208	2	,	,	,
10_1101-2021_02_08_430275	208	3	41	41	CD
10_1101-2021_02_08_430275	208	4	(	(	-LRB-
10_1101-2021_02_08_430275	208	5	2019	2019	CD
10_1101-2021_02_08_430275	208	6	)	)	-RRB-
10_1101-2021_02_08_430275	208	7	.	.	.
10_1101-2021_02_08_430275	209	1	477	477	CD
10_1101-2021_02_08_430275	209	2	4	4	CD
10_1101-2021_02_08_430275	209	3	.	.	.
10_1101-2021_02_08_430275	210	1	S	S	NNP
10_1101-2021_02_08_430275	210	2	Arikit	Arikit	NNP
10_1101-2021_02_08_430275	210	3	,	,	,
10_1101-2021_02_08_430275	210	4	et	et	NNP
10_1101-2021_02_08_430275	210	5	al	al	NNP
10_1101-2021_02_08_430275	210	6	.	.	NNP
10_1101-2021_02_08_430275	210	7	,	,	,
10_1101-2021_02_08_430275	210	8	QTL	QTL	NNP
10_1101-2021_02_08_430275	210	9	-	-	HYPH
10_1101-2021_02_08_430275	210	10	seq	seq	NN
10_1101-2021_02_08_430275	210	11	identifies	identifie	NNS
10_1101-2021_02_08_430275	210	12	cooked	cook	VBN
10_1101-2021_02_08_430275	210	13	grain	grain	NN
10_1101-2021_02_08_430275	210	14	elongation	elongation	NN
10_1101-2021_02_08_430275	210	15	QTLs	qtl	NNS
10_1101-2021_02_08_430275	210	16	near	near	IN
10_1101-2021_02_08_430275	210	17	soluble	soluble	JJ
10_1101-2021_02_08_430275	210	18	starch	starch	NN
10_1101-2021_02_08_430275	210	19	synthase	synthase	NN
10_1101-2021_02_08_430275	210	20	478	478	CD
10_1101-2021_02_08_430275	210	21	and	and	CC
10_1101-2021_02_08_430275	210	22	starch	starch	NN
10_1101-2021_02_08_430275	210	23	branching	branching	NN
10_1101-2021_02_08_430275	210	24	enzymes	enzyme	NNS
10_1101-2021_02_08_430275	210	25	in	in	IN
10_1101-2021_02_08_430275	210	26	rice	rice	NN
10_1101-2021_02_08_430275	210	27	(	(	-LRB-
10_1101-2021_02_08_430275	210	28	Oryza	Oryza	NNP
10_1101-2021_02_08_430275	210	29	sativa	sativa	NNP
10_1101-2021_02_08_430275	210	30	L.	L.	NNP
10_1101-2021_02_08_430275	210	31	)	)	-RRB-
10_1101-2021_02_08_430275	210	32	.	.	.
10_1101-2021_02_08_430275	211	1	Sci	Sci	NNP
10_1101-2021_02_08_430275	211	2	Rep	Rep	NNP
10_1101-2021_02_08_430275	211	3	9	9	CD
10_1101-2021_02_08_430275	211	4	,	,	,
10_1101-2021_02_08_430275	211	5	1–10	1–10	CD
10_1101-2021_02_08_430275	211	6	(	(	-LRB-
10_1101-2021_02_08_430275	211	7	2019	2019	CD
10_1101-2021_02_08_430275	211	8	)	)	-RRB-
10_1101-2021_02_08_430275	211	9	.	.	.
10_1101-2021_02_08_430275	212	1	479	479	CD
10_1101-2021_02_08_430275	212	2	5	5	CD
10_1101-2021_02_08_430275	212	3	.	.	.
10_1101-2021_02_08_430275	213	1	Q	Q	NNP
10_1101-2021_02_08_430275	213	2	Chen	Chen	NNP
10_1101-2021_02_08_430275	213	3	,	,	,
10_1101-2021_02_08_430275	213	4	et	et	NNP
10_1101-2021_02_08_430275	213	5	al	al	NNP
10_1101-2021_02_08_430275	213	6	.	.	NNP
10_1101-2021_02_08_430275	213	7	,	,	,
10_1101-2021_02_08_430275	213	8	Identification	identification	NN
10_1101-2021_02_08_430275	213	9	and	and	CC
10_1101-2021_02_08_430275	213	10	genetic	genetic	JJ
10_1101-2021_02_08_430275	213	11	mapping	mapping	NN
10_1101-2021_02_08_430275	213	12	for	for	IN
10_1101-2021_02_08_430275	213	13	rht	rht	NN
10_1101-2021_02_08_430275	213	14	-	-	HYPH
10_1101-2021_02_08_430275	213	15	DM	DM	NNP
10_1101-2021_02_08_430275	213	16	,	,	,
10_1101-2021_02_08_430275	213	17	a	a	DT
10_1101-2021_02_08_430275	213	18	dominant	dominant	JJ
10_1101-2021_02_08_430275	213	19	dwarfing	dwarf	VBG
10_1101-2021_02_08_430275	213	20	gene	gene	NN
10_1101-2021_02_08_430275	213	21	in	in	IN
10_1101-2021_02_08_430275	213	22	480	480	CD
10_1101-2021_02_08_430275	213	23	mutant	mutant	JJ
10_1101-2021_02_08_430275	213	24	semi	semi	JJ
10_1101-2021_02_08_430275	213	25	-	-	JJ
10_1101-2021_02_08_430275	213	26	dwarf	dwarf	JJ
10_1101-2021_02_08_430275	213	27	maize	maize	NN
10_1101-2021_02_08_430275	213	28	using	use	VBG
10_1101-2021_02_08_430275	213	29	QTL	QTL	NNP
10_1101-2021_02_08_430275	213	30	-	-	HYPH
10_1101-2021_02_08_430275	213	31	seq	seq	NN
10_1101-2021_02_08_430275	213	32	approach	approach	NN
10_1101-2021_02_08_430275	213	33	.	.	.
10_1101-2021_02_08_430275	214	1	Genes	Genes	NNP
10_1101-2021_02_08_430275	214	2	Genomics	Genomics	NNP
10_1101-2021_02_08_430275	214	3	40	40	CD
10_1101-2021_02_08_430275	214	4	,	,	,
10_1101-2021_02_08_430275	214	5	1091–1099	1091–1099	CD
10_1101-2021_02_08_430275	214	6	(	(	-LRB-
10_1101-2021_02_08_430275	214	7	2018	2018	CD
10_1101-2021_02_08_430275	214	8	)	)	-RRB-
10_1101-2021_02_08_430275	214	9	.	.	.
10_1101-2021_02_08_430275	215	1	481	481	CD
10_1101-2021_02_08_430275	215	2	6	6	CD
10_1101-2021_02_08_430275	215	3	.	.	.
10_1101-2021_02_08_430275	216	1	J	J	NNP
10_1101-2021_02_08_430275	216	2	Clevenger	Clevenger	NNP
10_1101-2021_02_08_430275	216	3	,	,	,
10_1101-2021_02_08_430275	216	4	et	et	NNP
10_1101-2021_02_08_430275	216	5	al	al	NNP
10_1101-2021_02_08_430275	216	6	.	.	NNP
10_1101-2021_02_08_430275	216	7	,	,	,
10_1101-2021_02_08_430275	216	8	Mapping	Mapping	NNP
10_1101-2021_02_08_430275	216	9	Late	Late	NNP
10_1101-2021_02_08_430275	216	10	Leaf	Leaf	NNP
10_1101-2021_02_08_430275	216	11	Spot	Spot	NNP
10_1101-2021_02_08_430275	216	12	Resistance	Resistance	NNP
10_1101-2021_02_08_430275	216	13	in	in	IN
10_1101-2021_02_08_430275	216	14	Peanut	Peanut	NNP
10_1101-2021_02_08_430275	216	15	(	(	-LRB-
10_1101-2021_02_08_430275	216	16	Arachis	Arachis	NNP
10_1101-2021_02_08_430275	216	17	hypogaea	hypogaea	XX
10_1101-2021_02_08_430275	216	18	)	)	-RRB-
10_1101-2021_02_08_430275	216	19	Using	use	VBG
10_1101-2021_02_08_430275	216	20	482	482	CD
10_1101-2021_02_08_430275	216	21	QTL	qtl	NN
10_1101-2021_02_08_430275	216	22	-	-	HYPH
10_1101-2021_02_08_430275	216	23	seq	seq	NN
10_1101-2021_02_08_430275	216	24	Reveals	Reveals	NNP
10_1101-2021_02_08_430275	216	25	Markers	Markers	NNPS
10_1101-2021_02_08_430275	216	26	for	for	IN
10_1101-2021_02_08_430275	216	27	Marker	Marker	NNP
10_1101-2021_02_08_430275	216	28	-	-	HYPH
10_1101-2021_02_08_430275	216	29	Assisted	Assisted	NNP
10_1101-2021_02_08_430275	216	30	Selection	Selection	NNP
10_1101-2021_02_08_430275	216	31	.	.	.
10_1101-2021_02_08_430275	217	1	Front	Front	NNP
10_1101-2021_02_08_430275	217	2	Plant	Plant	NNP
10_1101-2021_02_08_430275	217	3	Sci	Sci	NNP
10_1101-2021_02_08_430275	217	4	9	9	CD
10_1101-2021_02_08_430275	217	5	,	,	,
10_1101-2021_02_08_430275	217	6	83	83	CD
10_1101-2021_02_08_430275	217	7	(	(	-LRB-
10_1101-2021_02_08_430275	217	8	2018	2018	CD
10_1101-2021_02_08_430275	217	9	)	)	-RRB-
10_1101-2021_02_08_430275	217	10	.	.	.
10_1101-2021_02_08_430275	218	1	483	483	CD
10_1101-2021_02_08_430275	218	2	7	7	CD
10_1101-2021_02_08_430275	218	3	.	.	.
10_1101-2021_02_08_430275	219	1	F	F	NNP
10_1101-2021_02_08_430275	219	2	Duveau	Duveau	NNP
10_1101-2021_02_08_430275	219	3	,	,	,
10_1101-2021_02_08_430275	219	4	et	et	NNP
10_1101-2021_02_08_430275	219	5	al	al	NNP
10_1101-2021_02_08_430275	219	6	.	.	NNP
10_1101-2021_02_08_430275	219	7	,	,	,
10_1101-2021_02_08_430275	219	8	Mapping	map	VBG
10_1101-2021_02_08_430275	219	9	small	small	JJ
10_1101-2021_02_08_430275	219	10	effect	effect	NN
10_1101-2021_02_08_430275	219	11	mutations	mutation	NNS
10_1101-2021_02_08_430275	219	12	in	in	IN
10_1101-2021_02_08_430275	219	13	Saccharomyces	saccharomyce	NNS
10_1101-2021_02_08_430275	219	14	cerevisiae	cerevisiae	VBZ
10_1101-2021_02_08_430275	219	15	:	:	:
10_1101-2021_02_08_430275	219	16	impacts	impact	NNS
10_1101-2021_02_08_430275	219	17	of	of	IN
10_1101-2021_02_08_430275	219	18	484	484	CD
10_1101-2021_02_08_430275	219	19	experimental	experimental	JJ
10_1101-2021_02_08_430275	219	20	design	design	NN
10_1101-2021_02_08_430275	219	21	and	and	CC
10_1101-2021_02_08_430275	219	22	mutational	mutational	JJ
10_1101-2021_02_08_430275	219	23	properties	property	NNS
10_1101-2021_02_08_430275	219	24	.	.	.
10_1101-2021_02_08_430275	220	1	G3	G3	NNP
10_1101-2021_02_08_430275	220	2	(	(	-LRB-
10_1101-2021_02_08_430275	220	3	Bethesda	Bethesda	NNP
10_1101-2021_02_08_430275	220	4	)	)	-RRB-
10_1101-2021_02_08_430275	220	5	4	4	CD
10_1101-2021_02_08_430275	220	6	,	,	,
10_1101-2021_02_08_430275	220	7	1205–1216	1205–1216	CD
10_1101-2021_02_08_430275	220	8	(	(	-LRB-
10_1101-2021_02_08_430275	220	9	2014	2014	CD
10_1101-2021_02_08_430275	220	10	)	)	-RRB-
10_1101-2021_02_08_430275	220	11	.	.	.
10_1101-2021_02_08_430275	221	1	485	485	CD
10_1101-2021_02_08_430275	221	2	8	8	CD
10_1101-2021_02_08_430275	221	3	.	.	.
10_1101-2021_02_08_430275	222	1	J	J	NNP
10_1101-2021_02_08_430275	222	2	Zhang	Zhang	NNP
10_1101-2021_02_08_430275	222	3	,	,	,
10_1101-2021_02_08_430275	222	4	DR	DR	NNP
10_1101-2021_02_08_430275	222	5	Panthee	Panthee	NNP
10_1101-2021_02_08_430275	222	6	,	,	,
10_1101-2021_02_08_430275	222	7	PyBSASeq	pybsaseq	XX
10_1101-2021_02_08_430275	222	8	:	:	:
10_1101-2021_02_08_430275	222	9	a	a	DT
10_1101-2021_02_08_430275	222	10	simple	simple	JJ
10_1101-2021_02_08_430275	222	11	and	and	CC
10_1101-2021_02_08_430275	222	12	effective	effective	JJ
10_1101-2021_02_08_430275	222	13	algorithm	algorithm	NN
10_1101-2021_02_08_430275	222	14	for	for	IN
10_1101-2021_02_08_430275	222	15	bulked	bulked	NNP
10_1101-2021_02_08_430275	222	16	segregant	segregant	NNP
10_1101-2021_02_08_430275	222	17	486	486	CD
10_1101-2021_02_08_430275	222	18	analysis	analysis	NN
10_1101-2021_02_08_430275	222	19	with	with	IN
10_1101-2021_02_08_430275	222	20	whole	whole	RB
10_1101-2021_02_08_430275	222	21	-	-	HYPH
10_1101-2021_02_08_430275	222	22	genome	genome	RB
10_1101-2021_02_08_430275	222	23	sequencing	sequencing	NN
10_1101-2021_02_08_430275	222	24	data	datum	NNS
10_1101-2021_02_08_430275	222	25	.	.	.
10_1101-2021_02_08_430275	223	1	BMC	BMC	NNP
10_1101-2021_02_08_430275	223	2	Bioinforma	Bioinforma	NNP
10_1101-2021_02_08_430275	223	3	.	.	.
10_1101-2021_02_08_430275	224	1	21	21	CD
10_1101-2021_02_08_430275	224	2	,	,	,
10_1101-2021_02_08_430275	224	3	99	99	CD
10_1101-2021_02_08_430275	224	4	(	(	-LRB-
10_1101-2021_02_08_430275	224	5	2020	2020	CD
10_1101-2021_02_08_430275	224	6	)	)	-RRB-
10_1101-2021_02_08_430275	224	7	.	.	.
10_1101-2021_02_08_430275	225	1	487	487	CD
10_1101-2021_02_08_430275	225	2	9	9	CD
10_1101-2021_02_08_430275	225	3	.	.	.
10_1101-2021_02_08_430275	226	1	Z	Z	NNP
10_1101-2021_02_08_430275	226	2	Yang	Yang	NNP
10_1101-2021_02_08_430275	226	3	,	,	,
10_1101-2021_02_08_430275	226	4	et	et	NNP
10_1101-2021_02_08_430275	226	5	al	al	NNP
10_1101-2021_02_08_430275	226	6	.	.	NNP
10_1101-2021_02_08_430275	226	7	,	,	,
10_1101-2021_02_08_430275	226	8	Mapping	Mapping	NNP
10_1101-2021_02_08_430275	226	9	of	of	IN
10_1101-2021_02_08_430275	226	10	Quantitative	Quantitative	NNP
10_1101-2021_02_08_430275	226	11	Trait	Trait	NNP
10_1101-2021_02_08_430275	226	12	Loci	Loci	NNP
10_1101-2021_02_08_430275	226	13	Underlying	Underlying	NNP
10_1101-2021_02_08_430275	226	14	Cold	Cold	NNP
10_1101-2021_02_08_430275	226	15	Tolerance	Tolerance	NNP
10_1101-2021_02_08_430275	226	16	in	in	IN
10_1101-2021_02_08_430275	226	17	Rice	Rice	NNP
10_1101-2021_02_08_430275	226	18	Seedlings	Seedlings	NNP
10_1101-2021_02_08_430275	226	19	488	488	CD
10_1101-2021_02_08_430275	226	20	via	via	IN
10_1101-2021_02_08_430275	226	21	High	High	NNP
10_1101-2021_02_08_430275	226	22	-	-	HYPH
10_1101-2021_02_08_430275	226	23	Throughput	throughput	NN
10_1101-2021_02_08_430275	226	24	Sequencing	sequencing	NN
10_1101-2021_02_08_430275	226	25	of	of	IN
10_1101-2021_02_08_430275	226	26	Pooled	pool	VBN
10_1101-2021_02_08_430275	226	27	Extremes	Extremes	NNPS
10_1101-2021_02_08_430275	226	28	.	.	.
10_1101-2021_02_08_430275	227	1	PLOS	PLOS	NNP
10_1101-2021_02_08_430275	227	2	ONE	one	CD
10_1101-2021_02_08_430275	227	3	8	8	CD
10_1101-2021_02_08_430275	227	4	,	,	,
10_1101-2021_02_08_430275	227	5	e68433	e68433	NN
10_1101-2021_02_08_430275	227	6	(	(	-LRB-
10_1101-2021_02_08_430275	227	7	2013	2013	CD
10_1101-2021_02_08_430275	227	8	)	)	-RRB-
10_1101-2021_02_08_430275	227	9	.	.	.
10_1101-2021_02_08_430275	228	1	489	489	CD
10_1101-2021_02_08_430275	228	2	10	10	CD
10_1101-2021_02_08_430275	228	3	.	.	.
10_1101-2021_02_08_430275	229	1	H	H	NNP
10_1101-2021_02_08_430275	229	2	Takagi	Takagi	NNP
10_1101-2021_02_08_430275	229	3	,	,	,
10_1101-2021_02_08_430275	229	4	et	et	NNP
10_1101-2021_02_08_430275	229	5	al	al	NNP
10_1101-2021_02_08_430275	229	6	.	.	NNP
10_1101-2021_02_08_430275	229	7	,	,	,
10_1101-2021_02_08_430275	229	8	QTL	QTL	NNP
10_1101-2021_02_08_430275	229	9	-	-	HYPH
10_1101-2021_02_08_430275	229	10	seq	seq	NN
10_1101-2021_02_08_430275	229	11	:	:	:
10_1101-2021_02_08_430275	229	12	rapid	rapid	JJ
10_1101-2021_02_08_430275	229	13	mapping	mapping	NN
10_1101-2021_02_08_430275	229	14	of	of	IN
10_1101-2021_02_08_430275	229	15	quantitative	quantitative	JJ
10_1101-2021_02_08_430275	229	16	trait	trait	NNP
10_1101-2021_02_08_430275	229	17	loci	loci	NNP
10_1101-2021_02_08_430275	229	18	in	in	IN
10_1101-2021_02_08_430275	229	19	rice	rice	NN
10_1101-2021_02_08_430275	229	20	by	by	IN
10_1101-2021_02_08_430275	229	21	whole	whole	JJ
10_1101-2021_02_08_430275	229	22	genome	genome	NN
10_1101-2021_02_08_430275	229	23	490	490	CD
10_1101-2021_02_08_430275	229	24	resequencing	resequencing	NN
10_1101-2021_02_08_430275	229	25	of	of	IN
10_1101-2021_02_08_430275	229	26	DNA	dna	NN
10_1101-2021_02_08_430275	229	27	from	from	IN
10_1101-2021_02_08_430275	229	28	two	two	CD
10_1101-2021_02_08_430275	229	29	bulked	bulked	JJ
10_1101-2021_02_08_430275	229	30	populations	population	NNS
10_1101-2021_02_08_430275	229	31	.	.	.
10_1101-2021_02_08_430275	230	1	Plant	Plant	NNP
10_1101-2021_02_08_430275	230	2	J.	J.	NNP
10_1101-2021_02_08_430275	231	1	74	74	CD
10_1101-2021_02_08_430275	231	2	,	,	,
10_1101-2021_02_08_430275	231	3	174–183	174–183	CD
10_1101-2021_02_08_430275	231	4	(	(	-LRB-
10_1101-2021_02_08_430275	231	5	2013	2013	CD
10_1101-2021_02_08_430275	231	6	)	)	-RRB-
10_1101-2021_02_08_430275	231	7	.	.	.
10_1101-2021_02_08_430275	232	1	491	491	CD
10_1101-2021_02_08_430275	232	2	11	11	CD
10_1101-2021_02_08_430275	232	3	.	.	.
10_1101-2021_02_08_430275	233	1	PM	PM	NNP
10_1101-2021_02_08_430275	233	2	Magwene	Magwene	NNP
10_1101-2021_02_08_430275	233	3	,	,	,
10_1101-2021_02_08_430275	233	4	JH	JH	NNP
10_1101-2021_02_08_430275	233	5	Willis	Willis	NNP
10_1101-2021_02_08_430275	233	6	,	,	,
10_1101-2021_02_08_430275	233	7	JK	JK	NNP
10_1101-2021_02_08_430275	233	8	Kelly	Kelly	NNP
10_1101-2021_02_08_430275	233	9	,	,	,
10_1101-2021_02_08_430275	233	10	The	the	DT
10_1101-2021_02_08_430275	233	11	Statistics	Statistics	NNPS
10_1101-2021_02_08_430275	233	12	of	of	IN
10_1101-2021_02_08_430275	233	13	Bulk	Bulk	NNP
10_1101-2021_02_08_430275	233	14	Segregant	Segregant	NNP
10_1101-2021_02_08_430275	233	15	Analysis	Analysis	NNP
10_1101-2021_02_08_430275	233	16	Using	use	VBG
10_1101-2021_02_08_430275	233	17	Next	Next	NNP
10_1101-2021_02_08_430275	233	18	Gen-	Gen-	NNP
10_1101-2021_02_08_430275	233	19	492	492	CD
10_1101-2021_02_08_430275	233	20	eration	eration	NN
10_1101-2021_02_08_430275	233	21	Sequencing	sequencing	NN
10_1101-2021_02_08_430275	233	22	.	.	.
10_1101-2021_02_08_430275	234	1	PLOS	PLOS	NNP
10_1101-2021_02_08_430275	234	2	Comput	comput	NN
10_1101-2021_02_08_430275	234	3	.	.	.
10_1101-2021_02_08_430275	235	1	Biol	Biol	NNP
10_1101-2021_02_08_430275	235	2	.	.	.
10_1101-2021_02_08_430275	236	1	7	7	CD
10_1101-2021_02_08_430275	236	2	,	,	,
10_1101-2021_02_08_430275	236	3	e1002255	e1002255	NNP
10_1101-2021_02_08_430275	236	4	(	(	-LRB-
10_1101-2021_02_08_430275	236	5	2011	2011	CD
10_1101-2021_02_08_430275	236	6	)	)	-RRB-
10_1101-2021_02_08_430275	236	7	.	.	.
10_1101-2021_02_08_430275	237	1	493	493	CD
10_1101-2021_02_08_430275	237	2	12	12	CD
10_1101-2021_02_08_430275	237	3	.	.	.
10_1101-2021_02_08_430275	238	1	Z	Z	NNP
10_1101-2021_02_08_430275	238	2	Lahari	Lahari	NNP
10_1101-2021_02_08_430275	238	3	,	,	,
10_1101-2021_02_08_430275	238	4	et	et	NNP
10_1101-2021_02_08_430275	238	5	al	al	NNP
10_1101-2021_02_08_430275	238	6	.	.	NNP
10_1101-2021_02_08_430275	238	7	,	,	,
10_1101-2021_02_08_430275	238	8	QTL	QTL	NNP
10_1101-2021_02_08_430275	238	9	-	-	HYPH
10_1101-2021_02_08_430275	238	10	seq	seq	NN
10_1101-2021_02_08_430275	238	11	reveals	reveal	VBZ
10_1101-2021_02_08_430275	238	12	a	a	DT
10_1101-2021_02_08_430275	238	13	major	major	JJ
10_1101-2021_02_08_430275	238	14	root	root	NN
10_1101-2021_02_08_430275	238	15	-	-	HYPH
10_1101-2021_02_08_430275	238	16	knot	knot	NN
10_1101-2021_02_08_430275	238	17	nematode	nematode	NNP
10_1101-2021_02_08_430275	238	18	resistance	resistance	NNP
10_1101-2021_02_08_430275	238	19	locus	locus	NN
10_1101-2021_02_08_430275	238	20	on	on	IN
10_1101-2021_02_08_430275	238	21	chromo-	chromo-	NN
10_1101-2021_02_08_430275	238	22	494	494	CD
10_1101-2021_02_08_430275	238	23	some	some	DT
10_1101-2021_02_08_430275	238	24	11	11	CD
10_1101-2021_02_08_430275	238	25	in	in	IN
10_1101-2021_02_08_430275	238	26	rice	rice	NN
10_1101-2021_02_08_430275	238	27	(	(	-LRB-
10_1101-2021_02_08_430275	238	28	Oryza	Oryza	NNP
10_1101-2021_02_08_430275	238	29	sativa	sativa	NNP
10_1101-2021_02_08_430275	238	30	L.	L.	NNP
10_1101-2021_02_08_430275	238	31	)	)	-RRB-
10_1101-2021_02_08_430275	238	32	.	.	.
10_1101-2021_02_08_430275	239	1	Euphytica	Euphytica	NNP
10_1101-2021_02_08_430275	239	2	215	215	CD
10_1101-2021_02_08_430275	239	3	,	,	,
10_1101-2021_02_08_430275	239	4	117	117	CD
10_1101-2021_02_08_430275	239	5	(	(	-LRB-
10_1101-2021_02_08_430275	239	6	2019	2019	CD
10_1101-2021_02_08_430275	239	7	)	)	-RRB-
10_1101-2021_02_08_430275	239	8	.	.	.
10_1101-2021_02_08_430275	240	1	495	495	CD
10_1101-2021_02_08_430275	240	2	6	6	CD
10_1101-2021_02_08_430275	240	3	|	|	CD
10_1101-2021_02_08_430275	240	4	https://doi.org/10.1101/654137	https://doi.org/10.1101/654137	NN
10_1101-2021_02_08_430275	240	5	Zhang	Zhang	NNP
10_1101-2021_02_08_430275	240	6	et	et	NNP
10_1101-2021_02_08_430275	240	7	al	al	NNP
10_1101-2021_02_08_430275	240	8	.	.	.
10_1101-2021_02_08_430275	241	1	.CC	.CC	NFP
10_1101-2021_02_08_430275	241	2	-	-	:
10_1101-2021_02_08_430275	241	3	BY	by	IN
10_1101-2021_02_08_430275	241	4	-	-	HYPH
10_1101-2021_02_08_430275	241	5	NC	NC	NNP
10_1101-2021_02_08_430275	241	6	-	-	HYPH
10_1101-2021_02_08_430275	241	7	ND	ND	NNP
10_1101-2021_02_08_430275	241	8	4.0	4.0	CD
10_1101-2021_02_08_430275	241	9	International	International	NNP
10_1101-2021_02_08_430275	241	10	licenseavailable	licenseavailable	NN
10_1101-2021_02_08_430275	241	11	under	under	IN
10_1101-2021_02_08_430275	241	12	a	a	DT
10_1101-2021_02_08_430275	241	13	(	(	-LRB-
10_1101-2021_02_08_430275	241	14	which	which	WDT
10_1101-2021_02_08_430275	241	15	was	be	VBD
10_1101-2021_02_08_430275	241	16	not	not	RB
10_1101-2021_02_08_430275	241	17	certified	certify	VBN
10_1101-2021_02_08_430275	241	18	by	by	IN
10_1101-2021_02_08_430275	241	19	peer	peer	NN
10_1101-2021_02_08_430275	241	20	review	review	NN
10_1101-2021_02_08_430275	241	21	)	)	-RRB-
10_1101-2021_02_08_430275	241	22	is	be	VBZ
10_1101-2021_02_08_430275	241	23	the	the	DT
10_1101-2021_02_08_430275	241	24	author	author	NN
10_1101-2021_02_08_430275	241	25	/	/	SYM
10_1101-2021_02_08_430275	241	26	funder	funder	NN
10_1101-2021_02_08_430275	241	27	,	,	,
10_1101-2021_02_08_430275	241	28	who	who	WP
10_1101-2021_02_08_430275	241	29	has	have	VBZ
10_1101-2021_02_08_430275	241	30	granted	grant	VBN
10_1101-2021_02_08_430275	241	31	bioRxiv	biorxiv	IN
10_1101-2021_02_08_430275	241	32	a	a	DT
10_1101-2021_02_08_430275	241	33	license	license	NN
10_1101-2021_02_08_430275	241	34	to	to	TO
10_1101-2021_02_08_430275	241	35	display	display	VB
10_1101-2021_02_08_430275	241	36	the	the	DT
10_1101-2021_02_08_430275	241	37	preprint	preprint	NN
10_1101-2021_02_08_430275	241	38	in	in	IN
10_1101-2021_02_08_430275	241	39	perpetuity	perpetuity	NN
10_1101-2021_02_08_430275	241	40	.	.	.
10_1101-2021_02_08_430275	242	1	It	-PRON-	PRP
10_1101-2021_02_08_430275	242	2	is	be	VBZ
10_1101-2021_02_08_430275	242	3	made	make	VBN
10_1101-2021_02_08_430275	242	4	The	the	DT
10_1101-2021_02_08_430275	242	5	copyright	copyright	NN
10_1101-2021_02_08_430275	242	6	holder	holder	NN
10_1101-2021_02_08_430275	242	7	for	for	IN
10_1101-2021_02_08_430275	242	8	this	this	DT
10_1101-2021_02_08_430275	242	9	preprintthis	preprintthis	NN
10_1101-2021_02_08_430275	242	10	version	version	NN
10_1101-2021_02_08_430275	242	11	posted	post	VBD
10_1101-2021_02_08_430275	242	12	February	February	NNP
10_1101-2021_02_08_430275	242	13	10	10	CD
10_1101-2021_02_08_430275	242	14	,	,	,
10_1101-2021_02_08_430275	242	15	2021	2021	CD
10_1101-2021_02_08_430275	242	16	.	.	.
10_1101-2021_02_08_430275	242	17	;	;	:
10_1101-2021_02_08_430275	242	18	https://doi.org/10.1101/2021.02.08.430275doi	https://doi.org/10.1101/2021.02.08.430275doi	ADD
10_1101-2021_02_08_430275	242	19	:	:	:
10_1101-2021_02_08_430275	242	20	bioRxiv	biorxiv	IN
10_1101-2021_02_08_430275	242	21	preprint	preprint	NN
10_1101-2021_02_08_430275	242	22	https://doi.org/10.1101/654137	https://doi.org/10.1101/654137	VBZ
10_1101-2021_02_08_430275	242	23	https://doi.org/10.1101/2021.02.08.430275	https://doi.org/10.1101/2021.02.08.430275	NNP
10_1101-2021_02_08_430275	242	24	http://creativecommons.org/licenses/by-nc-nd/4.0/	http://creativecommons.org/licenses/by-nc-nd/4.0/	NNP