id	author	title	date	pages	extension	mime	words	sentences	flesch	summary	cache	txt
10_1101-2021_02_11_430871	Vadnais, David	ParticleChromo3D: A Particle Swarm Optimization Algorithm for Chromosome and Genome 3D Structure Prediction from Hi-C Data	2021	24	.pdf	application/pdf	10071	1053	63	ParticleChromo3D: A Particle Swarm Optimization Algorithm for Chromosome and Genome 3D Structure Prediction from Hi-C Data chromosome and genome structure reconstruction from Hi-C data using Particle Swarm Optimization approach chromosome bin, according to the particle swarm algorithm, and then iterates its position towards a global best This paper presents ParticleChromo3D, a new distance-based algorithm for chromosome 3D structure The structures generated by ParticleChromo3D also shows that the result at swarm size Structures generated by ParticleChromo3D at different swarm size values. obtained by comparing the ParticleChromo3D algorithm's output structure to the simulated dataset's true plot of ParticleChromo3D SCC performance on 500KB GM12878 cell Hi-C data for chromosome 1 to 23. plot of ParticleChromo3D SCC performance on 500KB GM12878 cell Hi-C data for chromosome 1 to 23. chromosome 3D structure reconstruction algorithms on the GM12878 data set at both the 1MB and 500KB chromosome and genome structures reconstructed from Hi-C data.	./cache/10_1101-2021_02_11_430871.pdf	./txt/10_1101-2021_02_11_430871.txt