id sid tid token lemma pos work_cfbskzb7hzha5apjddr27rkukm 1 1 Genotypic genotypic JJ work_cfbskzb7hzha5apjddr27rkukm 1 2 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 1 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 1 4 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 1 5 associated associate VBN work_cfbskzb7hzha5apjddr27rkukm 1 6 with with IN work_cfbskzb7hzha5apjddr27rkukm 1 7 transmission transmission NN work_cfbskzb7hzha5apjddr27rkukm 1 8 and and CC work_cfbskzb7hzha5apjddr27rkukm 1 9 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 1 10 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 1 11 in in IN work_cfbskzb7hzha5apjddr27rkukm 1 12 the the DT work_cfbskzb7hzha5apjddr27rkukm 1 13 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 1 14 lineage lineage NN work_cfbskzb7hzha5apjddr27rkukm 1 15 of of IN work_cfbskzb7hzha5apjddr27rkukm 1 16 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 1 17 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 1 18 Genotypic genotypic JJ work_cfbskzb7hzha5apjddr27rkukm 1 19 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 1 20 of of IN work_cfbskzb7hzha5apjddr27rkukm 1 21 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 1 22 associated associate VBN work_cfbskzb7hzha5apjddr27rkukm 1 23 with with IN work_cfbskzb7hzha5apjddr27rkukm 1 24 transmission transmission NN work_cfbskzb7hzha5apjddr27rkukm 1 25 and and CC work_cfbskzb7hzha5apjddr27rkukm 1 26 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 1 27 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 1 28 in in IN work_cfbskzb7hzha5apjddr27rkukm 1 29 the the DT work_cfbskzb7hzha5apjddr27rkukm 1 30 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 1 31 lineage lineage NN work_cfbskzb7hzha5apjddr27rkukm 1 32 of of IN work_cfbskzb7hzha5apjddr27rkukm 1 33 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 1 34 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 1 35 J J NNP work_cfbskzb7hzha5apjddr27rkukm 1 36 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 1 37 R. R. NNP work_cfbskzb7hzha5apjddr27rkukm 1 38 Chang Chang NNP work_cfbskzb7hzha5apjddr27rkukm 1 39 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 1 40 * * NFP work_cfbskzb7hzha5apjddr27rkukm 1 41 , , , work_cfbskzb7hzha5apjddr27rkukm 1 42 C C NNP work_cfbskzb7hzha5apjddr27rkukm 1 43 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 1 44 H. H. NNP work_cfbskzb7hzha5apjddr27rkukm 1 45 Lin Lin NNP work_cfbskzb7hzha5apjddr27rkukm 1 46 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 1 47 * * NFP work_cfbskzb7hzha5apjddr27rkukm 1 48 , , , work_cfbskzb7hzha5apjddr27rkukm 1 49 S S NNP work_cfbskzb7hzha5apjddr27rkukm 1 50 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 1 51 F. F. NNP work_cfbskzb7hzha5apjddr27rkukm 1 52 Tsai Tsai NNP work_cfbskzb7hzha5apjddr27rkukm 1 53 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 1 54 , , , work_cfbskzb7hzha5apjddr27rkukm 1 55 I I NNP work_cfbskzb7hzha5apjddr27rkukm 1 56 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 1 57 J. J. NNP work_cfbskzb7hzha5apjddr27rkukm 2 1 Su Su NNP work_cfbskzb7hzha5apjddr27rkukm 2 2 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 2 3 , , , work_cfbskzb7hzha5apjddr27rkukm 2 4 F F NNP work_cfbskzb7hzha5apjddr27rkukm 2 5 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 2 6 C. C. NNP work_cfbskzb7hzha5apjddr27rkukm 2 7 Tseng Tseng NNP work_cfbskzb7hzha5apjddr27rkukm 2 8 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 2 9 , , , work_cfbskzb7hzha5apjddr27rkukm 2 10 Y Y NNP work_cfbskzb7hzha5apjddr27rkukm 2 11 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 2 12 T. T. NNP work_cfbskzb7hzha5apjddr27rkukm 2 13 Chen Chen NNP work_cfbskzb7hzha5apjddr27rkukm 2 14 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 2 15 , , , work_cfbskzb7hzha5apjddr27rkukm 2 16 T T NNP work_cfbskzb7hzha5apjddr27rkukm 2 17 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 2 18 S. S. NNP work_cfbskzb7hzha5apjddr27rkukm 2 19 Chiueh Chiueh NNP work_cfbskzb7hzha5apjddr27rkukm 2 20 3 3 CD work_cfbskzb7hzha5apjddr27rkukm 2 21 , , , work_cfbskzb7hzha5apjddr27rkukm 2 22 J J NNP work_cfbskzb7hzha5apjddr27rkukm 2 23 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 2 24 R. R. NNP work_cfbskzb7hzha5apjddr27rkukm 2 25 Sun Sun NNP work_cfbskzb7hzha5apjddr27rkukm 2 26 3 3 CD work_cfbskzb7hzha5apjddr27rkukm 2 27 , , , work_cfbskzb7hzha5apjddr27rkukm 2 28 T T NNP work_cfbskzb7hzha5apjddr27rkukm 2 29 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 2 30 S. S. NNP work_cfbskzb7hzha5apjddr27rkukm 2 31 Huang Huang NNP work_cfbskzb7hzha5apjddr27rkukm 2 32 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 2 33 , , , work_cfbskzb7hzha5apjddr27rkukm 2 34 Y Y NNP work_cfbskzb7hzha5apjddr27rkukm 2 35 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 2 36 S. S. NNP work_cfbskzb7hzha5apjddr27rkukm 2 37 Chen Chen NNP work_cfbskzb7hzha5apjddr27rkukm 2 38 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 2 39 and and CC work_cfbskzb7hzha5apjddr27rkukm 2 40 H H NNP work_cfbskzb7hzha5apjddr27rkukm 2 41 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 2 42 Y. Y. NNP work_cfbskzb7hzha5apjddr27rkukm 3 1 Dou Dou NNP work_cfbskzb7hzha5apjddr27rkukm 3 2 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 3 3 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 3 4 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 3 5 Division Division NNP work_cfbskzb7hzha5apjddr27rkukm 3 6 of of IN work_cfbskzb7hzha5apjddr27rkukm 3 7 Infectious Infectious NNP work_cfbskzb7hzha5apjddr27rkukm 3 8 Diseases Diseases NNPS work_cfbskzb7hzha5apjddr27rkukm 3 9 , , , work_cfbskzb7hzha5apjddr27rkukm 3 10 2 2 LS work_cfbskzb7hzha5apjddr27rkukm 3 11 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 3 12 Division Division NNP work_cfbskzb7hzha5apjddr27rkukm 3 13 of of IN work_cfbskzb7hzha5apjddr27rkukm 3 14 Molecular Molecular NNP work_cfbskzb7hzha5apjddr27rkukm 3 15 and and CC work_cfbskzb7hzha5apjddr27rkukm 3 16 Genomic Genomic NNP work_cfbskzb7hzha5apjddr27rkukm 3 17 Medicine Medicine NNP work_cfbskzb7hzha5apjddr27rkukm 3 18 , , , work_cfbskzb7hzha5apjddr27rkukm 3 19 National National NNP work_cfbskzb7hzha5apjddr27rkukm 3 20 Health Health NNP work_cfbskzb7hzha5apjddr27rkukm 3 21 Research Research NNP work_cfbskzb7hzha5apjddr27rkukm 3 22 Institutes Institutes NNPS work_cfbskzb7hzha5apjddr27rkukm 3 23 , , , work_cfbskzb7hzha5apjddr27rkukm 3 24 Zhunan Zhunan NNP work_cfbskzb7hzha5apjddr27rkukm 3 25 , , , work_cfbskzb7hzha5apjddr27rkukm 3 26 Miaoli Miaoli NNP work_cfbskzb7hzha5apjddr27rkukm 3 27 , , , work_cfbskzb7hzha5apjddr27rkukm 3 28 3 3 LS work_cfbskzb7hzha5apjddr27rkukm 3 29 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 3 30 Department Department NNP work_cfbskzb7hzha5apjddr27rkukm 3 31 of of IN work_cfbskzb7hzha5apjddr27rkukm 3 32 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 3 33 Pathology Pathology NNP work_cfbskzb7hzha5apjddr27rkukm 3 34 , , , work_cfbskzb7hzha5apjddr27rkukm 3 35 Tri Tri NNP work_cfbskzb7hzha5apjddr27rkukm 3 36 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 3 37 Service Service NNP work_cfbskzb7hzha5apjddr27rkukm 3 38 General General NNP work_cfbskzb7hzha5apjddr27rkukm 3 39 Hospital Hospital NNP work_cfbskzb7hzha5apjddr27rkukm 3 40 , , , work_cfbskzb7hzha5apjddr27rkukm 3 41 Taipei Taipei NNP work_cfbskzb7hzha5apjddr27rkukm 3 42 and and CC work_cfbskzb7hzha5apjddr27rkukm 3 43 4 4 LS work_cfbskzb7hzha5apjddr27rkukm 3 44 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 3 45 Department Department NNP work_cfbskzb7hzha5apjddr27rkukm 3 46 of of IN work_cfbskzb7hzha5apjddr27rkukm 3 47 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 3 48 , , , work_cfbskzb7hzha5apjddr27rkukm 3 49 Kaohsiung Kaohsiung NNP work_cfbskzb7hzha5apjddr27rkukm 3 50 Veterans Veterans NNP work_cfbskzb7hzha5apjddr27rkukm 3 51 General General NNP work_cfbskzb7hzha5apjddr27rkukm 3 52 Hospital Hospital NNP work_cfbskzb7hzha5apjddr27rkukm 3 53 , , , work_cfbskzb7hzha5apjddr27rkukm 3 54 Kaohsiung Kaohsiung NNP work_cfbskzb7hzha5apjddr27rkukm 3 55 , , , work_cfbskzb7hzha5apjddr27rkukm 3 56 Taiwan Taiwan NNP work_cfbskzb7hzha5apjddr27rkukm 3 57 Abstract Abstract NNP work_cfbskzb7hzha5apjddr27rkukm 3 58 The the DT work_cfbskzb7hzha5apjddr27rkukm 3 59 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 3 60 genotype genotype NN work_cfbskzb7hzha5apjddr27rkukm 3 61 of of IN work_cfbskzb7hzha5apjddr27rkukm 3 62 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 3 63 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 3 64 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 3 65 an an DT work_cfbskzb7hzha5apjddr27rkukm 3 66 endemic endemic JJ work_cfbskzb7hzha5apjddr27rkukm 3 67 lineage lineage NN work_cfbskzb7hzha5apjddr27rkukm 3 68 in in IN work_cfbskzb7hzha5apjddr27rkukm 3 69 East East NNP work_cfbskzb7hzha5apjddr27rkukm 3 70 Asia Asia NNP work_cfbskzb7hzha5apjddr27rkukm 3 71 that that WDT work_cfbskzb7hzha5apjddr27rkukm 3 72 has have VBZ work_cfbskzb7hzha5apjddr27rkukm 3 73 disseminated disseminate VBN work_cfbskzb7hzha5apjddr27rkukm 3 74 worldwide worldwide RB work_cfbskzb7hzha5apjddr27rkukm 3 75 . . . work_cfbskzb7hzha5apjddr27rkukm 4 1 It -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 4 2 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 4 3 a a DT work_cfbskzb7hzha5apjddr27rkukm 4 4 major major JJ work_cfbskzb7hzha5apjddr27rkukm 4 5 health health NN work_cfbskzb7hzha5apjddr27rkukm 4 6 concern concern NN work_cfbskzb7hzha5apjddr27rkukm 4 7 , , , work_cfbskzb7hzha5apjddr27rkukm 4 8 as as IN work_cfbskzb7hzha5apjddr27rkukm 4 9 it -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 4 10 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 4 11 geographically geographically RB work_cfbskzb7hzha5apjddr27rkukm 4 12 widespread widespread JJ work_cfbskzb7hzha5apjddr27rkukm 4 13 and and CC work_cfbskzb7hzha5apjddr27rkukm 4 14 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 4 15 considered consider VBN work_cfbskzb7hzha5apjddr27rkukm 4 16 to to TO work_cfbskzb7hzha5apjddr27rkukm 4 17 be be VB work_cfbskzb7hzha5apjddr27rkukm 4 18 hypervirulent hypervirulent JJ work_cfbskzb7hzha5apjddr27rkukm 4 19 . . . work_cfbskzb7hzha5apjddr27rkukm 5 1 To to TO work_cfbskzb7hzha5apjddr27rkukm 5 2 elucidate elucidate VB work_cfbskzb7hzha5apjddr27rkukm 5 3 its -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 5 4 genetic genetic JJ work_cfbskzb7hzha5apjddr27rkukm 5 5 diversity diversity NN work_cfbskzb7hzha5apjddr27rkukm 5 6 in in IN work_cfbskzb7hzha5apjddr27rkukm 5 7 Taiwan Taiwan NNP work_cfbskzb7hzha5apjddr27rkukm 5 8 , , , work_cfbskzb7hzha5apjddr27rkukm 5 9 phylogenetic phylogenetic JJ work_cfbskzb7hzha5apjddr27rkukm 5 10 reconstruction reconstruction NN work_cfbskzb7hzha5apjddr27rkukm 5 11 was be VBD work_cfbskzb7hzha5apjddr27rkukm 5 12 performed perform VBN work_cfbskzb7hzha5apjddr27rkukm 5 13 using use VBG work_cfbskzb7hzha5apjddr27rkukm 5 14 338 338 CD work_cfbskzb7hzha5apjddr27rkukm 5 15 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 5 16 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 5 17 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 5 18 family family NN work_cfbskzb7hzha5apjddr27rkukm 5 19 clinical clinical JJ work_cfbskzb7hzha5apjddr27rkukm 5 20 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 5 21 . . . work_cfbskzb7hzha5apjddr27rkukm 6 1 Region region NN work_cfbskzb7hzha5apjddr27rkukm 6 2 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 6 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 6 4 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 6 5 difference difference NN work_cfbskzb7hzha5apjddr27rkukm 6 6 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 6 7 revealed reveal VBD work_cfbskzb7hzha5apjddr27rkukm 6 8 the the DT work_cfbskzb7hzha5apjddr27rkukm 6 9 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 6 10 from from IN work_cfbskzb7hzha5apjddr27rkukm 6 11 Taiwan Taiwan NNP work_cfbskzb7hzha5apjddr27rkukm 6 12 to to TO work_cfbskzb7hzha5apjddr27rkukm 6 13 be be VB work_cfbskzb7hzha5apjddr27rkukm 6 14 distributed distribute VBN work_cfbskzb7hzha5apjddr27rkukm 6 15 among among IN work_cfbskzb7hzha5apjddr27rkukm 6 16 six six CD work_cfbskzb7hzha5apjddr27rkukm 6 17 subgroups subgroup NNS work_cfbskzb7hzha5apjddr27rkukm 6 18 of of IN work_cfbskzb7hzha5apjddr27rkukm 6 19 a a DT work_cfbskzb7hzha5apjddr27rkukm 6 20 phylogenetic phylogenetic JJ work_cfbskzb7hzha5apjddr27rkukm 6 21 tree tree NN work_cfbskzb7hzha5apjddr27rkukm 6 22 . . . work_cfbskzb7hzha5apjddr27rkukm 7 1 Synonymous synonymous JJ work_cfbskzb7hzha5apjddr27rkukm 7 2 single single JJ work_cfbskzb7hzha5apjddr27rkukm 7 3 nucleotide nucleotide JJ work_cfbskzb7hzha5apjddr27rkukm 7 4 polymorphisms polymorphism NNS work_cfbskzb7hzha5apjddr27rkukm 7 5 at at IN work_cfbskzb7hzha5apjddr27rkukm 7 6 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 7 7 chromosomal chromosomal NN work_cfbskzb7hzha5apjddr27rkukm 7 8 positions position NNS work_cfbskzb7hzha5apjddr27rkukm 7 9 were be VBD work_cfbskzb7hzha5apjddr27rkukm 7 10 also also RB work_cfbskzb7hzha5apjddr27rkukm 7 11 analysed analyse VBN work_cfbskzb7hzha5apjddr27rkukm 7 12 . . . work_cfbskzb7hzha5apjddr27rkukm 8 1 Among among IN work_cfbskzb7hzha5apjddr27rkukm 8 2 the the DT work_cfbskzb7hzha5apjddr27rkukm 8 3 338 338 CD work_cfbskzb7hzha5apjddr27rkukm 8 4 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 8 5 analysed analyse VBN work_cfbskzb7hzha5apjddr27rkukm 8 6 for for IN work_cfbskzb7hzha5apjddr27rkukm 8 7 single single JJ work_cfbskzb7hzha5apjddr27rkukm 8 8 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 8 9 nucleotide nucleotide JJ work_cfbskzb7hzha5apjddr27rkukm 8 10 polymorphisms polymorphism NNS work_cfbskzb7hzha5apjddr27rkukm 8 11 by by IN work_cfbskzb7hzha5apjddr27rkukm 8 12 using use VBG work_cfbskzb7hzha5apjddr27rkukm 8 13 mass mass NN work_cfbskzb7hzha5apjddr27rkukm 8 14 spectrometry spectrometry NN work_cfbskzb7hzha5apjddr27rkukm 8 15 , , , work_cfbskzb7hzha5apjddr27rkukm 8 16 the the DT work_cfbskzb7hzha5apjddr27rkukm 8 17 most most RBS work_cfbskzb7hzha5apjddr27rkukm 8 18 frequent frequent JJ work_cfbskzb7hzha5apjddr27rkukm 8 19 strain strain NN work_cfbskzb7hzha5apjddr27rkukm 8 20 found find VBN work_cfbskzb7hzha5apjddr27rkukm 8 21 was be VBD work_cfbskzb7hzha5apjddr27rkukm 8 22 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 8 23 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 8 24 53.3 53.3 CD work_cfbskzb7hzha5apjddr27rkukm 8 25 % % NN work_cfbskzb7hzha5apjddr27rkukm 8 26 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 8 27 , , , work_cfbskzb7hzha5apjddr27rkukm 8 28 followed follow VBN work_cfbskzb7hzha5apjddr27rkukm 8 29 by by IN work_cfbskzb7hzha5apjddr27rkukm 8 30 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 8 31 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 8 32 14.8 14.8 CD work_cfbskzb7hzha5apjddr27rkukm 8 33 % % NN work_cfbskzb7hzha5apjddr27rkukm 8 34 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 8 35 and and CC work_cfbskzb7hzha5apjddr27rkukm 8 36 ST22 ST22 NNP work_cfbskzb7hzha5apjddr27rkukm 8 37 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 8 38 14.5 14.5 CD work_cfbskzb7hzha5apjddr27rkukm 8 39 % % NN work_cfbskzb7hzha5apjddr27rkukm 8 40 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 8 41 . . . work_cfbskzb7hzha5apjddr27rkukm 9 1 Tests test NNS work_cfbskzb7hzha5apjddr27rkukm 9 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 9 3 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 9 4 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 9 5 showed show VBD work_cfbskzb7hzha5apjddr27rkukm 9 6 that that IN work_cfbskzb7hzha5apjddr27rkukm 9 7 the the DT work_cfbskzb7hzha5apjddr27rkukm 9 8 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 9 9 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 9 10 , , , work_cfbskzb7hzha5apjddr27rkukm 9 11 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 9 12 and and CC work_cfbskzb7hzha5apjddr27rkukm 9 13 ST26 ST26 NNP work_cfbskzb7hzha5apjddr27rkukm 9 14 were be VBD work_cfbskzb7hzha5apjddr27rkukm 9 15 over over RB work_cfbskzb7hzha5apjddr27rkukm 9 16 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 9 17 represented represent VBN work_cfbskzb7hzha5apjddr27rkukm 9 18 in in IN work_cfbskzb7hzha5apjddr27rkukm 9 19 the the DT work_cfbskzb7hzha5apjddr27rkukm 9 20 multidrug multidrug NN work_cfbskzb7hzha5apjddr27rkukm 9 21 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 9 22 resistant resistant JJ work_cfbskzb7hzha5apjddr27rkukm 9 23 population population NN work_cfbskzb7hzha5apjddr27rkukm 9 24 . . . work_cfbskzb7hzha5apjddr27rkukm 10 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 10 2 presence presence NN work_cfbskzb7hzha5apjddr27rkukm 10 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 10 4 muta- muta- JJ work_cfbskzb7hzha5apjddr27rkukm 10 5 tions tion NNS work_cfbskzb7hzha5apjddr27rkukm 10 6 in in IN work_cfbskzb7hzha5apjddr27rkukm 10 7 putative putative JJ work_cfbskzb7hzha5apjddr27rkukm 10 8 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 10 9 coding code VBG work_cfbskzb7hzha5apjddr27rkukm 10 10 for for IN work_cfbskzb7hzha5apjddr27rkukm 10 11 DNA dna NN work_cfbskzb7hzha5apjddr27rkukm 10 12 repair repair NN work_cfbskzb7hzha5apjddr27rkukm 10 13 enzymes enzyme NNS work_cfbskzb7hzha5apjddr27rkukm 10 14 , , , work_cfbskzb7hzha5apjddr27rkukm 10 15 which which WDT work_cfbskzb7hzha5apjddr27rkukm 10 16 could could MD work_cfbskzb7hzha5apjddr27rkukm 10 17 confer confer VB work_cfbskzb7hzha5apjddr27rkukm 10 18 a a DT work_cfbskzb7hzha5apjddr27rkukm 10 19 mutator mutator NN work_cfbskzb7hzha5apjddr27rkukm 10 20 phenotype phenotype NN work_cfbskzb7hzha5apjddr27rkukm 10 21 to to TO work_cfbskzb7hzha5apjddr27rkukm 10 22 facilitate facilitate VB work_cfbskzb7hzha5apjddr27rkukm 10 23 spreading spreading NN work_cfbskzb7hzha5apjddr27rkukm 10 24 of of IN work_cfbskzb7hzha5apjddr27rkukm 10 25 the the DT work_cfbskzb7hzha5apjddr27rkukm 10 26 pathogen pathogen NN work_cfbskzb7hzha5apjddr27rkukm 10 27 , , , work_cfbskzb7hzha5apjddr27rkukm 10 28 did do VBD work_cfbskzb7hzha5apjddr27rkukm 10 29 not not RB work_cfbskzb7hzha5apjddr27rkukm 10 30 demonstrate demonstrate VB work_cfbskzb7hzha5apjddr27rkukm 10 31 an an DT work_cfbskzb7hzha5apjddr27rkukm 10 32 association association NN work_cfbskzb7hzha5apjddr27rkukm 10 33 with with IN work_cfbskzb7hzha5apjddr27rkukm 10 34 multidrug multidrug NN work_cfbskzb7hzha5apjddr27rkukm 10 35 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 10 36 . . . work_cfbskzb7hzha5apjddr27rkukm 11 1 Therefore therefore RB work_cfbskzb7hzha5apjddr27rkukm 11 2 , , , work_cfbskzb7hzha5apjddr27rkukm 11 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 11 4 DNA dna NN work_cfbskzb7hzha5apjddr27rkukm 11 5 repair repair NN work_cfbskzb7hzha5apjddr27rkukm 11 6 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 11 7 may may MD work_cfbskzb7hzha5apjddr27rkukm 11 8 be be VB work_cfbskzb7hzha5apjddr27rkukm 11 9 involved involve VBN work_cfbskzb7hzha5apjddr27rkukm 11 10 in in IN work_cfbskzb7hzha5apjddr27rkukm 11 11 transmission transmission NN work_cfbskzb7hzha5apjddr27rkukm 11 12 but but CC work_cfbskzb7hzha5apjddr27rkukm 11 13 not not RB work_cfbskzb7hzha5apjddr27rkukm 11 14 in in IN work_cfbskzb7hzha5apjddr27rkukm 11 15 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 11 16 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 11 17 . . . work_cfbskzb7hzha5apjddr27rkukm 12 1 Keywords keyword NNS work_cfbskzb7hzha5apjddr27rkukm 12 2 : : : work_cfbskzb7hzha5apjddr27rkukm 12 3 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 12 4 lineage lineage NN work_cfbskzb7hzha5apjddr27rkukm 12 5 , , , work_cfbskzb7hzha5apjddr27rkukm 12 6 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 12 7 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 12 8 , , , work_cfbskzb7hzha5apjddr27rkukm 12 9 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 12 10 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 12 11 Original Original NNP work_cfbskzb7hzha5apjddr27rkukm 12 12 Submission Submission NNP work_cfbskzb7hzha5apjddr27rkukm 12 13 : : : work_cfbskzb7hzha5apjddr27rkukm 12 14 20 20 CD work_cfbskzb7hzha5apjddr27rkukm 12 15 July July NNP work_cfbskzb7hzha5apjddr27rkukm 12 16 2010 2010 CD work_cfbskzb7hzha5apjddr27rkukm 12 17 ; ; : work_cfbskzb7hzha5apjddr27rkukm 12 18 Revised Revised NNP work_cfbskzb7hzha5apjddr27rkukm 12 19 Submission Submission NNP work_cfbskzb7hzha5apjddr27rkukm 12 20 : : : work_cfbskzb7hzha5apjddr27rkukm 12 21 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 12 22 November November NNP work_cfbskzb7hzha5apjddr27rkukm 12 23 2010 2010 CD work_cfbskzb7hzha5apjddr27rkukm 12 24 ; ; : work_cfbskzb7hzha5apjddr27rkukm 12 25 Accepted accept VBN work_cfbskzb7hzha5apjddr27rkukm 12 26 : : : work_cfbskzb7hzha5apjddr27rkukm 12 27 17 17 CD work_cfbskzb7hzha5apjddr27rkukm 12 28 November November NNP work_cfbskzb7hzha5apjddr27rkukm 12 29 2010 2010 CD work_cfbskzb7hzha5apjddr27rkukm 12 30 Editor editor NN work_cfbskzb7hzha5apjddr27rkukm 12 31 : : : work_cfbskzb7hzha5apjddr27rkukm 12 32 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 12 33 Drancourt Drancourt NNP work_cfbskzb7hzha5apjddr27rkukm 12 34 Article Article NNP work_cfbskzb7hzha5apjddr27rkukm 12 35 published publish VBD work_cfbskzb7hzha5apjddr27rkukm 12 36 online online RB work_cfbskzb7hzha5apjddr27rkukm 12 37 : : : work_cfbskzb7hzha5apjddr27rkukm 12 38 23 23 CD work_cfbskzb7hzha5apjddr27rkukm 12 39 November November NNP work_cfbskzb7hzha5apjddr27rkukm 12 40 2010 2010 CD work_cfbskzb7hzha5apjddr27rkukm 12 41 Clin Clin NNP work_cfbskzb7hzha5apjddr27rkukm 12 42 Microbiol Microbiol NNP work_cfbskzb7hzha5apjddr27rkukm 12 43 Infect Infect NNP work_cfbskzb7hzha5apjddr27rkukm 12 44 2011 2011 CD work_cfbskzb7hzha5apjddr27rkukm 12 45 ; ; : work_cfbskzb7hzha5apjddr27rkukm 12 46 17 17 CD work_cfbskzb7hzha5apjddr27rkukm 12 47 : : SYM work_cfbskzb7hzha5apjddr27rkukm 12 48 1391–1396 1391–1396 CD work_cfbskzb7hzha5apjddr27rkukm 12 49 10.1111 10.1111 CD work_cfbskzb7hzha5apjddr27rkukm 12 50 / / SYM work_cfbskzb7hzha5apjddr27rkukm 12 51 j.1469 j.1469 VB work_cfbskzb7hzha5apjddr27rkukm 12 52 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 12 53 0691.2010.03436.x 0691.2010.03436.x NN work_cfbskzb7hzha5apjddr27rkukm 12 54 Corresponding corresponding JJ work_cfbskzb7hzha5apjddr27rkukm 12 55 author author NN work_cfbskzb7hzha5apjddr27rkukm 12 56 : : : work_cfbskzb7hzha5apjddr27rkukm 12 57 H h NN work_cfbskzb7hzha5apjddr27rkukm 12 58 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 12 59 Y. y. NN work_cfbskzb7hzha5apjddr27rkukm 13 1 Dou Dou NNP work_cfbskzb7hzha5apjddr27rkukm 13 2 , , , work_cfbskzb7hzha5apjddr27rkukm 13 3 Division Division NNP work_cfbskzb7hzha5apjddr27rkukm 13 4 of of IN work_cfbskzb7hzha5apjddr27rkukm 13 5 Infectious Infectious NNP work_cfbskzb7hzha5apjddr27rkukm 13 6 Diseases Diseases NNPS work_cfbskzb7hzha5apjddr27rkukm 13 7 , , , work_cfbskzb7hzha5apjddr27rkukm 13 8 National National NNP work_cfbskzb7hzha5apjddr27rkukm 13 9 Health Health NNP work_cfbskzb7hzha5apjddr27rkukm 13 10 Research Research NNP work_cfbskzb7hzha5apjddr27rkukm 13 11 Institutes Institutes NNPS work_cfbskzb7hzha5apjddr27rkukm 13 12 , , , work_cfbskzb7hzha5apjddr27rkukm 13 13 No no UH work_cfbskzb7hzha5apjddr27rkukm 13 14 . . . work_cfbskzb7hzha5apjddr27rkukm 14 1 35 35 CD work_cfbskzb7hzha5apjddr27rkukm 14 2 Keyan Keyan NNP work_cfbskzb7hzha5apjddr27rkukm 14 3 Road Road NNP work_cfbskzb7hzha5apjddr27rkukm 14 4 , , , work_cfbskzb7hzha5apjddr27rkukm 14 5 Zhunan Zhunan NNP work_cfbskzb7hzha5apjddr27rkukm 14 6 Town Town NNP work_cfbskzb7hzha5apjddr27rkukm 14 7 , , , work_cfbskzb7hzha5apjddr27rkukm 14 8 Miaoli Miaoli NNP work_cfbskzb7hzha5apjddr27rkukm 14 9 County County NNP work_cfbskzb7hzha5apjddr27rkukm 14 10 350 350 CD work_cfbskzb7hzha5apjddr27rkukm 14 11 , , , work_cfbskzb7hzha5apjddr27rkukm 14 12 Taiwan Taiwan NNP work_cfbskzb7hzha5apjddr27rkukm 14 13 E E NNP work_cfbskzb7hzha5apjddr27rkukm 14 14 - - NN work_cfbskzb7hzha5apjddr27rkukm 14 15 mail mail NN work_cfbskzb7hzha5apjddr27rkukm 14 16 : : : work_cfbskzb7hzha5apjddr27rkukm 14 17 hydou@nhri.org.tw hydou@nhri.org.tw NN work_cfbskzb7hzha5apjddr27rkukm 14 18 * * NFP work_cfbskzb7hzha5apjddr27rkukm 14 19 These these DT work_cfbskzb7hzha5apjddr27rkukm 14 20 authors author NNS work_cfbskzb7hzha5apjddr27rkukm 14 21 contributed contribute VBD work_cfbskzb7hzha5apjddr27rkukm 14 22 equally equally RB work_cfbskzb7hzha5apjddr27rkukm 14 23 to to IN work_cfbskzb7hzha5apjddr27rkukm 14 24 this this DT work_cfbskzb7hzha5apjddr27rkukm 14 25 work work NN work_cfbskzb7hzha5apjddr27rkukm 14 26 . . . work_cfbskzb7hzha5apjddr27rkukm 15 1 Introduction introduction NN work_cfbskzb7hzha5apjddr27rkukm 15 2 Tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 15 3 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 15 4 TB TB NNP work_cfbskzb7hzha5apjddr27rkukm 15 5 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 15 6 remains remain VBZ work_cfbskzb7hzha5apjddr27rkukm 15 7 a a DT work_cfbskzb7hzha5apjddr27rkukm 15 8 worldwide worldwide JJ work_cfbskzb7hzha5apjddr27rkukm 15 9 healthcare healthcare NN work_cfbskzb7hzha5apjddr27rkukm 15 10 concern concern NN work_cfbskzb7hzha5apjddr27rkukm 15 11 and and CC work_cfbskzb7hzha5apjddr27rkukm 15 12 has have VBZ work_cfbskzb7hzha5apjddr27rkukm 15 13 been be VBN work_cfbskzb7hzha5apjddr27rkukm 15 14 characterized characterize VBN work_cfbskzb7hzha5apjddr27rkukm 15 15 as as IN work_cfbskzb7hzha5apjddr27rkukm 15 16 an an DT work_cfbskzb7hzha5apjddr27rkukm 15 17 epidemic epidemic NN work_cfbskzb7hzha5apjddr27rkukm 15 18 by by IN work_cfbskzb7hzha5apjddr27rkukm 15 19 the the DT work_cfbskzb7hzha5apjddr27rkukm 15 20 World World NNP work_cfbskzb7hzha5apjddr27rkukm 15 21 Health Health NNP work_cfbskzb7hzha5apjddr27rkukm 15 22 Organisation Organisation NNP work_cfbskzb7hzha5apjddr27rkukm 15 23 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 15 24 WHO WHO NNP work_cfbskzb7hzha5apjddr27rkukm 15 25 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 15 26 . . . work_cfbskzb7hzha5apjddr27rkukm 16 1 It -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 16 2 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 16 3 estimated estimate VBN work_cfbskzb7hzha5apjddr27rkukm 16 4 that that IN work_cfbskzb7hzha5apjddr27rkukm 16 5 one one CD work_cfbskzb7hzha5apjddr27rkukm 16 6 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 16 7 third third NN work_cfbskzb7hzha5apjddr27rkukm 16 8 of of IN work_cfbskzb7hzha5apjddr27rkukm 16 9 the the DT work_cfbskzb7hzha5apjddr27rkukm 16 10 world world NN work_cfbskzb7hzha5apjddr27rkukm 16 11 ’s ’s POS work_cfbskzb7hzha5apjddr27rkukm 16 12 population population NN work_cfbskzb7hzha5apjddr27rkukm 16 13 has have VBZ work_cfbskzb7hzha5apjddr27rkukm 16 14 been be VBN work_cfbskzb7hzha5apjddr27rkukm 16 15 infected infect VBN work_cfbskzb7hzha5apjddr27rkukm 16 16 with with IN work_cfbskzb7hzha5apjddr27rkukm 16 17 Mycobacte- Mycobacte- NNP work_cfbskzb7hzha5apjddr27rkukm 16 18 rium rium NN work_cfbskzb7hzha5apjddr27rkukm 16 19 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 16 20 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 16 21 MTB MTB NNP work_cfbskzb7hzha5apjddr27rkukm 16 22 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 16 23 and and CC work_cfbskzb7hzha5apjddr27rkukm 16 24 that that IN work_cfbskzb7hzha5apjddr27rkukm 16 25 3 3 CD work_cfbskzb7hzha5apjddr27rkukm 16 26 million million CD work_cfbskzb7hzha5apjddr27rkukm 16 27 people people NNS work_cfbskzb7hzha5apjddr27rkukm 16 28 die die VBP work_cfbskzb7hzha5apjddr27rkukm 16 29 of of IN work_cfbskzb7hzha5apjddr27rkukm 16 30 TB TB NNP work_cfbskzb7hzha5apjddr27rkukm 16 31 annually annually RB work_cfbskzb7hzha5apjddr27rkukm 16 32 . . . work_cfbskzb7hzha5apjddr27rkukm 17 1 Although although IN work_cfbskzb7hzha5apjddr27rkukm 17 2 both both DT work_cfbskzb7hzha5apjddr27rkukm 17 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 17 4 incidence incidence NN work_cfbskzb7hzha5apjddr27rkukm 17 5 and and CC work_cfbskzb7hzha5apjddr27rkukm 17 6 mortality mortality NN work_cfbskzb7hzha5apjddr27rkukm 17 7 rates rate NNS work_cfbskzb7hzha5apjddr27rkukm 17 8 of of IN work_cfbskzb7hzha5apjddr27rkukm 17 9 TB TB NNP work_cfbskzb7hzha5apjddr27rkukm 17 10 in in IN work_cfbskzb7hzha5apjddr27rkukm 17 11 Taiwan Taiwan NNP work_cfbskzb7hzha5apjddr27rkukm 17 12 have have VBP work_cfbskzb7hzha5apjddr27rkukm 17 13 shown show VBN work_cfbskzb7hzha5apjddr27rkukm 17 14 a a DT work_cfbskzb7hzha5apjddr27rkukm 17 15 steady steady JJ work_cfbskzb7hzha5apjddr27rkukm 17 16 decline decline NN work_cfbskzb7hzha5apjddr27rkukm 17 17 since since IN work_cfbskzb7hzha5apjddr27rkukm 17 18 1950 1950 CD work_cfbskzb7hzha5apjddr27rkukm 17 19 , , , work_cfbskzb7hzha5apjddr27rkukm 17 20 TB TB NNP work_cfbskzb7hzha5apjddr27rkukm 17 21 remains remain VBZ work_cfbskzb7hzha5apjddr27rkukm 17 22 a a DT work_cfbskzb7hzha5apjddr27rkukm 17 23 leading lead VBG work_cfbskzb7hzha5apjddr27rkukm 17 24 notifiable notifiable JJ work_cfbskzb7hzha5apjddr27rkukm 17 25 infectious infectious JJ work_cfbskzb7hzha5apjddr27rkukm 17 26 disease disease NN work_cfbskzb7hzha5apjddr27rkukm 17 27 on on IN work_cfbskzb7hzha5apjddr27rkukm 17 28 the the DT work_cfbskzb7hzha5apjddr27rkukm 17 29 island island NN work_cfbskzb7hzha5apjddr27rkukm 17 30 . . . work_cfbskzb7hzha5apjddr27rkukm 18 1 In in IN work_cfbskzb7hzha5apjddr27rkukm 18 2 2001 2001 CD work_cfbskzb7hzha5apjddr27rkukm 18 3 , , , work_cfbskzb7hzha5apjddr27rkukm 18 4 14 14 CD work_cfbskzb7hzha5apjddr27rkukm 18 5 486 486 CD work_cfbskzb7hzha5apjddr27rkukm 18 6 cases case NNS work_cfbskzb7hzha5apjddr27rkukm 18 7 were be VBD work_cfbskzb7hzha5apjddr27rkukm 18 8 reported report VBN work_cfbskzb7hzha5apjddr27rkukm 18 9 , , , work_cfbskzb7hzha5apjddr27rkukm 18 10 with with IN work_cfbskzb7hzha5apjddr27rkukm 18 11 a a DT work_cfbskzb7hzha5apjddr27rkukm 18 12 notification notification NN work_cfbskzb7hzha5apjddr27rkukm 18 13 rate rate NN work_cfbskzb7hzha5apjddr27rkukm 18 14 of of IN work_cfbskzb7hzha5apjddr27rkukm 18 15 64.9 64.9 CD work_cfbskzb7hzha5apjddr27rkukm 18 16 per per IN work_cfbskzb7hzha5apjddr27rkukm 18 17 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 18 18 000 000 CD work_cfbskzb7hzha5apjddr27rkukm 18 19 people people NNS work_cfbskzb7hzha5apjddr27rkukm 18 20 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 18 21 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 18 22 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 18 23 . . . work_cfbskzb7hzha5apjddr27rkukm 19 1 Amongst amongst IN work_cfbskzb7hzha5apjddr27rkukm 19 2 the the DT work_cfbskzb7hzha5apjddr27rkukm 19 3 most most RBS work_cfbskzb7hzha5apjddr27rkukm 19 4 prevalent prevalent JJ work_cfbskzb7hzha5apjddr27rkukm 19 5 MTB MTB NNP work_cfbskzb7hzha5apjddr27rkukm 19 6 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 19 7 , , , work_cfbskzb7hzha5apjddr27rkukm 19 8 the the DT work_cfbskzb7hzha5apjddr27rkukm 19 9 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 19 10 genotype genotype NN work_cfbskzb7hzha5apjddr27rkukm 19 11 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 19 12 a a DT work_cfbskzb7hzha5apjddr27rkukm 19 13 major major JJ work_cfbskzb7hzha5apjddr27rkukm 19 14 concern concern NN work_cfbskzb7hzha5apjddr27rkukm 19 15 on on IN work_cfbskzb7hzha5apjddr27rkukm 19 16 a a DT work_cfbskzb7hzha5apjddr27rkukm 19 17 global global JJ work_cfbskzb7hzha5apjddr27rkukm 19 18 basis basis NN work_cfbskzb7hzha5apjddr27rkukm 19 19 . . . work_cfbskzb7hzha5apjddr27rkukm 20 1 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 20 2 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 20 3 are be VBP work_cfbskzb7hzha5apjddr27rkukm 20 4 rapidly rapidly RB work_cfbskzb7hzha5apjddr27rkukm 20 5 spreading spread VBG work_cfbskzb7hzha5apjddr27rkukm 20 6 worldwide worldwide RB work_cfbskzb7hzha5apjddr27rkukm 20 7 and and CC work_cfbskzb7hzha5apjddr27rkukm 20 8 are be VBP work_cfbskzb7hzha5apjddr27rkukm 20 9 most most RBS work_cfbskzb7hzha5apjddr27rkukm 20 10 often often RB work_cfbskzb7hzha5apjddr27rkukm 20 11 associ- associ- RB work_cfbskzb7hzha5apjddr27rkukm 20 12 ated ate VBN work_cfbskzb7hzha5apjddr27rkukm 20 13 with with IN work_cfbskzb7hzha5apjddr27rkukm 20 14 major major JJ work_cfbskzb7hzha5apjddr27rkukm 20 15 TB TB NNP work_cfbskzb7hzha5apjddr27rkukm 20 16 outbreaks outbreak NNS work_cfbskzb7hzha5apjddr27rkukm 20 17 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 20 18 2–4 2–4 CD work_cfbskzb7hzha5apjddr27rkukm 20 19 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 20 20 . . . work_cfbskzb7hzha5apjddr27rkukm 21 1 At at IN work_cfbskzb7hzha5apjddr27rkukm 21 2 present present NN work_cfbskzb7hzha5apjddr27rkukm 21 3 , , , work_cfbskzb7hzha5apjddr27rkukm 21 4 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 21 5 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 21 6 account account VBP work_cfbskzb7hzha5apjddr27rkukm 21 7 for for IN work_cfbskzb7hzha5apjddr27rkukm 21 8 > > XX work_cfbskzb7hzha5apjddr27rkukm 21 9 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 21 10 % % NN work_cfbskzb7hzha5apjddr27rkukm 21 11 of of IN work_cfbskzb7hzha5apjddr27rkukm 21 12 TB TB NNP work_cfbskzb7hzha5apjddr27rkukm 21 13 cases case NNS work_cfbskzb7hzha5apjddr27rkukm 21 14 worldwide worldwide RB work_cfbskzb7hzha5apjddr27rkukm 21 15 and and CC work_cfbskzb7hzha5apjddr27rkukm 21 16 are be VBP work_cfbskzb7hzha5apjddr27rkukm 21 17 highly highly RB work_cfbskzb7hzha5apjddr27rkukm 21 18 endemic endemic JJ work_cfbskzb7hzha5apjddr27rkukm 21 19 throughout throughout IN work_cfbskzb7hzha5apjddr27rkukm 21 20 much much JJ work_cfbskzb7hzha5apjddr27rkukm 21 21 of of IN work_cfbskzb7hzha5apjddr27rkukm 21 22 east east NN work_cfbskzb7hzha5apjddr27rkukm 21 23 and and CC work_cfbskzb7hzha5apjddr27rkukm 21 24 southeast southeast JJ work_cfbskzb7hzha5apjddr27rkukm 21 25 Asia Asia NNP work_cfbskzb7hzha5apjddr27rkukm 21 26 , , , work_cfbskzb7hzha5apjddr27rkukm 21 27 where where WRB work_cfbskzb7hzha5apjddr27rkukm 21 28 they -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 21 29 account account VBP work_cfbskzb7hzha5apjddr27rkukm 21 30 for for IN work_cfbskzb7hzha5apjddr27rkukm 21 31 > > XX work_cfbskzb7hzha5apjddr27rkukm 21 32 50 50 CD work_cfbskzb7hzha5apjddr27rkukm 21 33 % % NN work_cfbskzb7hzha5apjddr27rkukm 21 34 of of IN work_cfbskzb7hzha5apjddr27rkukm 21 35 TB TB NNP work_cfbskzb7hzha5apjddr27rkukm 21 36 cases case NNS work_cfbskzb7hzha5apjddr27rkukm 21 37 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 21 38 3,5 3,5 CD work_cfbskzb7hzha5apjddr27rkukm 21 39 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 21 40 . . . work_cfbskzb7hzha5apjddr27rkukm 22 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 22 2 impor- impor- JJ work_cfbskzb7hzha5apjddr27rkukm 22 3 tance tance NN work_cfbskzb7hzha5apjddr27rkukm 22 4 of of IN work_cfbskzb7hzha5apjddr27rkukm 22 5 this this DT work_cfbskzb7hzha5apjddr27rkukm 22 6 genotype genotype NN work_cfbskzb7hzha5apjddr27rkukm 22 7 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 22 8 further further RB work_cfbskzb7hzha5apjddr27rkukm 22 9 highlighted highlight VBN work_cfbskzb7hzha5apjddr27rkukm 22 10 by by IN work_cfbskzb7hzha5apjddr27rkukm 22 11 the the DT work_cfbskzb7hzha5apjddr27rkukm 22 12 fact fact NN work_cfbskzb7hzha5apjddr27rkukm 22 13 that that IN work_cfbskzb7hzha5apjddr27rkukm 22 14 the the DT work_cfbskzb7hzha5apjddr27rkukm 22 15 recent recent JJ work_cfbskzb7hzha5apjddr27rkukm 22 16 epidemic epidemic NN work_cfbskzb7hzha5apjddr27rkukm 22 17 spread spread NN work_cfbskzb7hzha5apjddr27rkukm 22 18 of of IN work_cfbskzb7hzha5apjddr27rkukm 22 19 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 22 20 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 22 21 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 22 22 frequently frequently RB work_cfbskzb7hzha5apjddr27rkukm 22 23 associated associate VBN work_cfbskzb7hzha5apjddr27rkukm 22 24 with with IN work_cfbskzb7hzha5apjddr27rkukm 22 25 multiple multiple JJ work_cfbskzb7hzha5apjddr27rkukm 22 26 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 22 27 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 22 28 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 22 29 MDR MDR NNP work_cfbskzb7hzha5apjddr27rkukm 22 30 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 22 31 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 22 32 4–6 4–6 CD work_cfbskzb7hzha5apjddr27rkukm 22 33 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 22 34 . . . work_cfbskzb7hzha5apjddr27rkukm 23 1 Recent recent JJ work_cfbskzb7hzha5apjddr27rkukm 23 2 studies study NNS work_cfbskzb7hzha5apjddr27rkukm 23 3 have have VBP work_cfbskzb7hzha5apjddr27rkukm 23 4 demonstrated demonstrate VBN work_cfbskzb7hzha5apjddr27rkukm 23 5 worldwide worldwide JJ work_cfbskzb7hzha5apjddr27rkukm 23 6 dissemination dissemination NN work_cfbskzb7hzha5apjddr27rkukm 23 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 23 8 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 23 9 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 23 10 of of IN work_cfbskzb7hzha5apjddr27rkukm 23 11 the the DT work_cfbskzb7hzha5apjddr27rkukm 23 12 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 23 13 family family NN work_cfbskzb7hzha5apjddr27rkukm 23 14 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 23 15 characterized characterize VBN work_cfbskzb7hzha5apjddr27rkukm 23 16 chromo- chromo- NN work_cfbskzb7hzha5apjddr27rkukm 23 17 somally somally RB work_cfbskzb7hzha5apjddr27rkukm 23 18 as as IN work_cfbskzb7hzha5apjddr27rkukm 23 19 having have VBG work_cfbskzb7hzha5apjddr27rkukm 23 20 an an DT work_cfbskzb7hzha5apjddr27rkukm 23 21 IS6110 is6110 NN work_cfbskzb7hzha5apjddr27rkukm 23 22 insertion insertion NN work_cfbskzb7hzha5apjddr27rkukm 23 23 in in IN work_cfbskzb7hzha5apjddr27rkukm 23 24 the the DT work_cfbskzb7hzha5apjddr27rkukm 23 25 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 23 26 region region NN work_cfbskzb7hzha5apjddr27rkukm 23 27 of of IN work_cfbskzb7hzha5apjddr27rkukm 23 28 the the DT work_cfbskzb7hzha5apjddr27rkukm 23 29 genome genome NN work_cfbskzb7hzha5apjddr27rkukm 23 30 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 23 31 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 23 32 2,7–9 2,7–9 CD work_cfbskzb7hzha5apjddr27rkukm 23 33 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 23 34 and and CC work_cfbskzb7hzha5apjddr27rkukm 23 35 have have VBP work_cfbskzb7hzha5apjddr27rkukm 23 36 led lead VBN work_cfbskzb7hzha5apjddr27rkukm 23 37 to to IN work_cfbskzb7hzha5apjddr27rkukm 23 38 speculation speculation NN work_cfbskzb7hzha5apjddr27rkukm 23 39 about about IN work_cfbskzb7hzha5apjddr27rkukm 23 40 the the DT work_cfbskzb7hzha5apjddr27rkukm 23 41 hypervirulent hypervirulent JJ work_cfbskzb7hzha5apjddr27rkukm 23 42 features feature NNS work_cfbskzb7hzha5apjddr27rkukm 23 43 of of IN work_cfbskzb7hzha5apjddr27rkukm 23 44 this this DT work_cfbskzb7hzha5apjddr27rkukm 23 45 sublineage sublineage NN work_cfbskzb7hzha5apjddr27rkukm 23 46 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 23 47 10–13 10–13 NN work_cfbskzb7hzha5apjddr27rkukm 23 48 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 23 49 . . . work_cfbskzb7hzha5apjddr27rkukm 24 1 In in IN work_cfbskzb7hzha5apjddr27rkukm 24 2 contrast contrast NN work_cfbskzb7hzha5apjddr27rkukm 24 3 to to IN work_cfbskzb7hzha5apjddr27rkukm 24 4 the the DT work_cfbskzb7hzha5apjddr27rkukm 24 5 worldwide worldwide JJ work_cfbskzb7hzha5apjddr27rkukm 24 6 prevalence prevalence NN work_cfbskzb7hzha5apjddr27rkukm 24 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 24 8 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 24 9 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 24 10 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 24 11 , , , work_cfbskzb7hzha5apjddr27rkukm 24 12 the the DT work_cfbskzb7hzha5apjddr27rkukm 24 13 ancient ancient JJ work_cfbskzb7hzha5apjddr27rkukm 24 14 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 24 15 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 24 16 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 24 17 having have VBG work_cfbskzb7hzha5apjddr27rkukm 24 18 an an DT work_cfbskzb7hzha5apjddr27rkukm 24 19 intact intact JJ work_cfbskzb7hzha5apjddr27rkukm 24 20 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 24 21 region region NN work_cfbskzb7hzha5apjddr27rkukm 24 22 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 24 23 are be VBP work_cfbskzb7hzha5apjddr27rkukm 24 24 highly highly RB work_cfbskzb7hzha5apjddr27rkukm 24 25 diverse diverse JJ work_cfbskzb7hzha5apjddr27rkukm 24 26 and and CC work_cfbskzb7hzha5apjddr27rkukm 24 27 dominant dominant JJ work_cfbskzb7hzha5apjddr27rkukm 24 28 in in IN work_cfbskzb7hzha5apjddr27rkukm 24 29 Japan Japan NNP work_cfbskzb7hzha5apjddr27rkukm 24 30 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 24 31 14,15 14,15 CD work_cfbskzb7hzha5apjddr27rkukm 24 32 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 24 33 . . . work_cfbskzb7hzha5apjddr27rkukm 25 1 In in IN work_cfbskzb7hzha5apjddr27rkukm 25 2 a a DT work_cfbskzb7hzha5apjddr27rkukm 25 3 previous previous JJ work_cfbskzb7hzha5apjddr27rkukm 25 4 study study NN work_cfbskzb7hzha5apjddr27rkukm 25 5 we -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 25 6 reported report VBD work_cfbskzb7hzha5apjddr27rkukm 25 7 that that IN work_cfbskzb7hzha5apjddr27rkukm 25 8 the the DT work_cfbskzb7hzha5apjddr27rkukm 25 9 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 25 10 family family NN work_cfbskzb7hzha5apjddr27rkukm 25 11 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 25 12 in in IN work_cfbskzb7hzha5apjddr27rkukm 25 13 Taipei Taipei NNP work_cfbskzb7hzha5apjddr27rkukm 25 14 mainly mainly RB work_cfbskzb7hzha5apjddr27rkukm 25 15 belong belong VBP work_cfbskzb7hzha5apjddr27rkukm 25 16 to to IN work_cfbskzb7hzha5apjddr27rkukm 25 17 the the DT work_cfbskzb7hzha5apjddr27rkukm 25 18 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 25 19 subfamily subfamily NN work_cfbskzb7hzha5apjddr27rkukm 25 20 ; ; : work_cfbskzb7hzha5apjddr27rkukm 25 21 this this DT work_cfbskzb7hzha5apjddr27rkukm 25 22 suggested suggest VBD work_cfbskzb7hzha5apjddr27rkukm 25 23 that that IN work_cfbskzb7hzha5apjddr27rkukm 25 24 they -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 25 25 became become VBD work_cfbskzb7hzha5apjddr27rkukm 25 26 endemic endemic JJ work_cfbskzb7hzha5apjddr27rkukm 25 27 after after IN work_cfbskzb7hzha5apjddr27rkukm 25 28 originating originate VBG work_cfbskzb7hzha5apjddr27rkukm 25 29 from from IN work_cfbskzb7hzha5apjddr27rkukm 25 30 the the DT work_cfbskzb7hzha5apjddr27rkukm 25 31 evolutionary evolutionary JJ work_cfbskzb7hzha5apjddr27rkukm 25 32 stream stream NN work_cfbskzb7hzha5apjddr27rkukm 25 33 that that WDT work_cfbskzb7hzha5apjddr27rkukm 25 34 led lead VBD work_cfbskzb7hzha5apjddr27rkukm 25 35 to to IN work_cfbskzb7hzha5apjddr27rkukm 25 36 the the DT work_cfbskzb7hzha5apjddr27rkukm 25 37 dominant dominant JJ work_cfbskzb7hzha5apjddr27rkukm 25 38 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 25 39 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 25 40 subfamily subfamily RB work_cfbskzb7hzha5apjddr27rkukm 25 41 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 25 42 16,17 16,17 CD work_cfbskzb7hzha5apjddr27rkukm 25 43 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 25 44 . . . work_cfbskzb7hzha5apjddr27rkukm 26 1 Therefore therefore RB work_cfbskzb7hzha5apjddr27rkukm 26 2 , , , work_cfbskzb7hzha5apjddr27rkukm 26 3 phylogenetic phylogenetic JJ work_cfbskzb7hzha5apjddr27rkukm 26 4 investigation investigation NN work_cfbskzb7hzha5apjddr27rkukm 26 5 of of IN work_cfbskzb7hzha5apjddr27rkukm 26 6 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 26 7 The the DT work_cfbskzb7hzha5apjddr27rkukm 26 8 Authors Authors NNPS work_cfbskzb7hzha5apjddr27rkukm 26 9 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 26 10 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 26 11 and and CC work_cfbskzb7hzha5apjddr27rkukm 26 12 Infection Infection NNP work_cfbskzb7hzha5apjddr27rkukm 26 13 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 26 14 European European NNP work_cfbskzb7hzha5apjddr27rkukm 26 15 Society Society NNP work_cfbskzb7hzha5apjddr27rkukm 26 16 of of IN work_cfbskzb7hzha5apjddr27rkukm 26 17 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 26 18 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 26 19 and and CC work_cfbskzb7hzha5apjddr27rkukm 26 20 Infectious Infectious NNP work_cfbskzb7hzha5apjddr27rkukm 26 21 Diseases Diseases NNPS work_cfbskzb7hzha5apjddr27rkukm 26 22 ORIGINAL ORIGINAL NNP work_cfbskzb7hzha5apjddr27rkukm 26 23 ARTICLE article NN work_cfbskzb7hzha5apjddr27rkukm 26 24 BACTERIOLOGY BACTERIOLOGY NNP work_cfbskzb7hzha5apjddr27rkukm 26 25 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 26 26 family family NN work_cfbskzb7hzha5apjddr27rkukm 26 27 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 26 28 in in IN work_cfbskzb7hzha5apjddr27rkukm 26 29 Taiwan Taiwan NNP work_cfbskzb7hzha5apjddr27rkukm 26 30 will will MD work_cfbskzb7hzha5apjddr27rkukm 26 31 be be VB work_cfbskzb7hzha5apjddr27rkukm 26 32 useful useful JJ work_cfbskzb7hzha5apjddr27rkukm 26 33 for for IN work_cfbskzb7hzha5apjddr27rkukm 26 34 understand- understand- JJ work_cfbskzb7hzha5apjddr27rkukm 26 35 ing ing NNP work_cfbskzb7hzha5apjddr27rkukm 26 36 how how WRB work_cfbskzb7hzha5apjddr27rkukm 26 37 they -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 26 38 acquired acquire VBD work_cfbskzb7hzha5apjddr27rkukm 26 39 hypervirulent hypervirulent JJ work_cfbskzb7hzha5apjddr27rkukm 26 40 phenotypes phenotype NNS work_cfbskzb7hzha5apjddr27rkukm 26 41 and and CC work_cfbskzb7hzha5apjddr27rkukm 26 42 adapted adapt VBN work_cfbskzb7hzha5apjddr27rkukm 26 43 to to IN work_cfbskzb7hzha5apjddr27rkukm 26 44 the the DT work_cfbskzb7hzha5apjddr27rkukm 26 45 Taiwanese taiwanese JJ work_cfbskzb7hzha5apjddr27rkukm 26 46 human human JJ work_cfbskzb7hzha5apjddr27rkukm 26 47 host host NN work_cfbskzb7hzha5apjddr27rkukm 26 48 population population NN work_cfbskzb7hzha5apjddr27rkukm 26 49 . . . work_cfbskzb7hzha5apjddr27rkukm 27 1 It -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 27 2 was be VBD work_cfbskzb7hzha5apjddr27rkukm 27 3 suggested suggest VBN work_cfbskzb7hzha5apjddr27rkukm 27 4 that that IN work_cfbskzb7hzha5apjddr27rkukm 27 5 variable variable JJ work_cfbskzb7hzha5apjddr27rkukm 27 6 number number NN work_cfbskzb7hzha5apjddr27rkukm 27 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 27 8 tandem tandem NN work_cfbskzb7hzha5apjddr27rkukm 27 9 repeats repeat NNS work_cfbskzb7hzha5apjddr27rkukm 27 10 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 27 11 VNTR vntr NN work_cfbskzb7hzha5apjddr27rkukm 27 12 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 27 13 alleles allele NNS work_cfbskzb7hzha5apjddr27rkukm 27 14 are be VBP work_cfbskzb7hzha5apjddr27rkukm 27 15 phylogenetically phylogenetically RB work_cfbskzb7hzha5apjddr27rkukm 27 16 informative informative JJ work_cfbskzb7hzha5apjddr27rkukm 27 17 for for IN work_cfbskzb7hzha5apjddr27rkukm 27 18 the the DT work_cfbskzb7hzha5apjddr27rkukm 27 19 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 27 20 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 27 21 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 27 22 family family NN work_cfbskzb7hzha5apjddr27rkukm 27 23 . . . work_cfbskzb7hzha5apjddr27rkukm 28 1 In in IN work_cfbskzb7hzha5apjddr27rkukm 28 2 the the DT work_cfbskzb7hzha5apjddr27rkukm 28 3 present present JJ work_cfbskzb7hzha5apjddr27rkukm 28 4 study study NN work_cfbskzb7hzha5apjddr27rkukm 28 5 , , , work_cfbskzb7hzha5apjddr27rkukm 28 6 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 28 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 28 8 the the DT work_cfbskzb7hzha5apjddr27rkukm 28 9 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 28 10 family family NN work_cfbskzb7hzha5apjddr27rkukm 28 11 were be VBD work_cfbskzb7hzha5apjddr27rkukm 28 12 classified classify VBN work_cfbskzb7hzha5apjddr27rkukm 28 13 by by IN work_cfbskzb7hzha5apjddr27rkukm 28 14 using use VBG work_cfbskzb7hzha5apjddr27rkukm 28 15 ten ten CD work_cfbskzb7hzha5apjddr27rkukm 28 16 synonymous synonymous JJ work_cfbskzb7hzha5apjddr27rkukm 28 17 single single JJ work_cfbskzb7hzha5apjddr27rkukm 28 18 nucleotide nucleotide JJ work_cfbskzb7hzha5apjddr27rkukm 28 19 polymorphisms polymorphism NNS work_cfbskzb7hzha5apjddr27rkukm 28 20 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 28 21 SNPs SNPs NNPS work_cfbskzb7hzha5apjddr27rkukm 28 22 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 28 23 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 28 24 14,15 14,15 CD work_cfbskzb7hzha5apjddr27rkukm 28 25 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 28 26 ; ; : work_cfbskzb7hzha5apjddr27rkukm 28 27 in in IN work_cfbskzb7hzha5apjddr27rkukm 28 28 addition addition NN work_cfbskzb7hzha5apjddr27rkukm 28 29 , , , work_cfbskzb7hzha5apjddr27rkukm 28 30 the the DT work_cfbskzb7hzha5apjddr27rkukm 28 31 IS6110 is6110 NN work_cfbskzb7hzha5apjddr27rkukm 28 32 inser- inser- NN work_cfbskzb7hzha5apjddr27rkukm 28 33 tion tion NN work_cfbskzb7hzha5apjddr27rkukm 28 34 in in IN work_cfbskzb7hzha5apjddr27rkukm 28 35 the the DT work_cfbskzb7hzha5apjddr27rkukm 28 36 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 28 37 region region NN work_cfbskzb7hzha5apjddr27rkukm 28 38 , , , work_cfbskzb7hzha5apjddr27rkukm 28 39 the the DT work_cfbskzb7hzha5apjddr27rkukm 28 40 presence presence NN work_cfbskzb7hzha5apjddr27rkukm 28 41 or or CC work_cfbskzb7hzha5apjddr27rkukm 28 42 absence absence NN work_cfbskzb7hzha5apjddr27rkukm 28 43 of of IN work_cfbskzb7hzha5apjddr27rkukm 28 44 five five CD work_cfbskzb7hzha5apjddr27rkukm 28 45 large large JJ work_cfbskzb7hzha5apjddr27rkukm 28 46 sequence sequence NN work_cfbskzb7hzha5apjddr27rkukm 28 47 polymorphisms polymorphism NNS work_cfbskzb7hzha5apjddr27rkukm 28 48 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 28 49 RD105 RD105 NNP work_cfbskzb7hzha5apjddr27rkukm 28 50 , , , work_cfbskzb7hzha5apjddr27rkukm 28 51 RD207 rd207 NN work_cfbskzb7hzha5apjddr27rkukm 28 52 , , , work_cfbskzb7hzha5apjddr27rkukm 28 53 RD181 RD181 NNP work_cfbskzb7hzha5apjddr27rkukm 28 54 , , , work_cfbskzb7hzha5apjddr27rkukm 28 55 RD142 RD142 NNP work_cfbskzb7hzha5apjddr27rkukm 28 56 and and CC work_cfbskzb7hzha5apjddr27rkukm 28 57 RD150 RD150 NNP work_cfbskzb7hzha5apjddr27rkukm 28 58 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 28 59 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 28 60 18,19 18,19 CD work_cfbskzb7hzha5apjddr27rkukm 28 61 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 28 62 , , , work_cfbskzb7hzha5apjddr27rkukm 28 63 and and CC work_cfbskzb7hzha5apjddr27rkukm 28 64 non non JJ work_cfbskzb7hzha5apjddr27rkukm 28 65 - - JJ work_cfbskzb7hzha5apjddr27rkukm 28 66 synonymous synonymous JJ work_cfbskzb7hzha5apjddr27rkukm 28 67 SNPs snp NNS work_cfbskzb7hzha5apjddr27rkukm 28 68 in in IN work_cfbskzb7hzha5apjddr27rkukm 28 69 putative putative JJ work_cfbskzb7hzha5apjddr27rkukm 28 70 DNA dna NN work_cfbskzb7hzha5apjddr27rkukm 28 71 repair repair NN work_cfbskzb7hzha5apjddr27rkukm 28 72 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 28 73 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 28 74 mutT2 mutt2 ADD work_cfbskzb7hzha5apjddr27rkukm 28 75 , , , work_cfbskzb7hzha5apjddr27rkukm 28 76 mutT4 mutt4 ADD work_cfbskzb7hzha5apjddr27rkukm 28 77 , , , work_cfbskzb7hzha5apjddr27rkukm 28 78 and and CC work_cfbskzb7hzha5apjddr27rkukm 28 79 ogt ogt NN work_cfbskzb7hzha5apjddr27rkukm 28 80 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 28 81 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 28 82 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 28 83 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 28 84 were be VBD work_cfbskzb7hzha5apjddr27rkukm 28 85 analy- analy- NNS work_cfbskzb7hzha5apjddr27rkukm 28 86 sed se VBN work_cfbskzb7hzha5apjddr27rkukm 28 87 . . . work_cfbskzb7hzha5apjddr27rkukm 29 1 All all DT work_cfbskzb7hzha5apjddr27rkukm 29 2 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 29 3 were be VBD work_cfbskzb7hzha5apjddr27rkukm 29 4 subjected subject VBN work_cfbskzb7hzha5apjddr27rkukm 29 5 to to IN work_cfbskzb7hzha5apjddr27rkukm 29 6 24 24 CD work_cfbskzb7hzha5apjddr27rkukm 29 7 mycobacterial mycobacterial NN work_cfbskzb7hzha5apjddr27rkukm 29 8 inter- inter- NNP work_cfbskzb7hzha5apjddr27rkukm 29 9 spersed sperse VBD work_cfbskzb7hzha5apjddr27rkukm 29 10 repetitive repetitive JJ work_cfbskzb7hzha5apjddr27rkukm 29 11 units unit NNS work_cfbskzb7hzha5apjddr27rkukm 29 12 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 29 13 MIRU)-VNTR MIRU)-VNTR NNP work_cfbskzb7hzha5apjddr27rkukm 29 14 analyses analyses NNP work_cfbskzb7hzha5apjddr27rkukm 29 15 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 29 16 20 20 CD work_cfbskzb7hzha5apjddr27rkukm 29 17 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 29 18 to to TO work_cfbskzb7hzha5apjddr27rkukm 29 19 detect detect VB work_cfbskzb7hzha5apjddr27rkukm 29 20 probable probable JJ work_cfbskzb7hzha5apjddr27rkukm 29 21 epidemiological epidemiological JJ work_cfbskzb7hzha5apjddr27rkukm 29 22 linkage linkage NN work_cfbskzb7hzha5apjddr27rkukm 29 23 amongst amongst IN work_cfbskzb7hzha5apjddr27rkukm 29 24 patients patient NNS work_cfbskzb7hzha5apjddr27rkukm 29 25 . . . work_cfbskzb7hzha5apjddr27rkukm 30 1 Our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 30 2 analyses analysis NNS work_cfbskzb7hzha5apjddr27rkukm 30 3 will will MD work_cfbskzb7hzha5apjddr27rkukm 30 4 promote promote VB work_cfbskzb7hzha5apjddr27rkukm 30 5 a a DT work_cfbskzb7hzha5apjddr27rkukm 30 6 better well JJR work_cfbskzb7hzha5apjddr27rkukm 30 7 understanding understanding NN work_cfbskzb7hzha5apjddr27rkukm 30 8 of of IN work_cfbskzb7hzha5apjddr27rkukm 30 9 the the DT work_cfbskzb7hzha5apjddr27rkukm 30 10 pop- pop- NNP work_cfbskzb7hzha5apjddr27rkukm 30 11 ulation ulation NN work_cfbskzb7hzha5apjddr27rkukm 30 12 genetic genetic JJ work_cfbskzb7hzha5apjddr27rkukm 30 13 structure structure NN work_cfbskzb7hzha5apjddr27rkukm 30 14 of of IN work_cfbskzb7hzha5apjddr27rkukm 30 15 the the DT work_cfbskzb7hzha5apjddr27rkukm 30 16 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 30 17 family family NN work_cfbskzb7hzha5apjddr27rkukm 30 18 and and CC work_cfbskzb7hzha5apjddr27rkukm 30 19 extend extend VB work_cfbskzb7hzha5apjddr27rkukm 30 20 the the DT work_cfbskzb7hzha5apjddr27rkukm 30 21 information information NN work_cfbskzb7hzha5apjddr27rkukm 30 22 obtained obtain VBN work_cfbskzb7hzha5apjddr27rkukm 30 23 from from IN work_cfbskzb7hzha5apjddr27rkukm 30 24 the the DT work_cfbskzb7hzha5apjddr27rkukm 30 25 VNTR vntr NN work_cfbskzb7hzha5apjddr27rkukm 30 26 genotyping genotyping NN work_cfbskzb7hzha5apjddr27rkukm 30 27 method method NN work_cfbskzb7hzha5apjddr27rkukm 30 28 . . . work_cfbskzb7hzha5apjddr27rkukm 31 1 Materials material NNS work_cfbskzb7hzha5apjddr27rkukm 31 2 and and CC work_cfbskzb7hzha5apjddr27rkukm 31 3 Methods Methods NNP work_cfbskzb7hzha5apjddr27rkukm 31 4 Study Study NNP work_cfbskzb7hzha5apjddr27rkukm 31 5 population population NN work_cfbskzb7hzha5apjddr27rkukm 31 6 and and CC work_cfbskzb7hzha5apjddr27rkukm 31 7 bacterial bacterial JJ work_cfbskzb7hzha5apjddr27rkukm 31 8 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 31 9 Isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 31 10 were be VBD work_cfbskzb7hzha5apjddr27rkukm 31 11 collected collect VBN work_cfbskzb7hzha5apjddr27rkukm 31 12 between between IN work_cfbskzb7hzha5apjddr27rkukm 31 13 2004 2004 CD work_cfbskzb7hzha5apjddr27rkukm 31 14 and and CC work_cfbskzb7hzha5apjddr27rkukm 31 15 2007 2007 CD work_cfbskzb7hzha5apjddr27rkukm 31 16 from from IN work_cfbskzb7hzha5apjddr27rkukm 31 17 the the DT work_cfbskzb7hzha5apjddr27rkukm 31 18 mycobacteriology mycobacteriology NN work_cfbskzb7hzha5apjddr27rkukm 31 19 laboratories laboratory NNS work_cfbskzb7hzha5apjddr27rkukm 31 20 of of IN work_cfbskzb7hzha5apjddr27rkukm 31 21 five five CD work_cfbskzb7hzha5apjddr27rkukm 31 22 general general JJ work_cfbskzb7hzha5apjddr27rkukm 31 23 hospitals hospital NNS work_cfbskzb7hzha5apjddr27rkukm 31 24 located locate VBN work_cfbskzb7hzha5apjddr27rkukm 31 25 in in IN work_cfbskzb7hzha5apjddr27rkukm 31 26 four four CD work_cfbskzb7hzha5apjddr27rkukm 31 27 geographical geographical JJ work_cfbskzb7hzha5apjddr27rkukm 31 28 regions region NNS work_cfbskzb7hzha5apjddr27rkukm 31 29 in in IN work_cfbskzb7hzha5apjddr27rkukm 31 30 Taiwan Taiwan NNP work_cfbskzb7hzha5apjddr27rkukm 31 31 , , , work_cfbskzb7hzha5apjddr27rkukm 31 32 namely namely RB work_cfbskzb7hzha5apjddr27rkukm 31 33 , , , work_cfbskzb7hzha5apjddr27rkukm 31 34 Taipei Taipei NNP work_cfbskzb7hzha5apjddr27rkukm 31 35 Tri Tri NNP work_cfbskzb7hzha5apjddr27rkukm 31 36 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 31 37 Service Service NNP work_cfbskzb7hzha5apjddr27rkukm 31 38 General General NNP work_cfbskzb7hzha5apjddr27rkukm 31 39 Hospital Hospital NNP work_cfbskzb7hzha5apjddr27rkukm 31 40 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 31 41 northern northern JJ work_cfbskzb7hzha5apjddr27rkukm 31 42 region region NN work_cfbskzb7hzha5apjddr27rkukm 31 43 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 31 44 , , , work_cfbskzb7hzha5apjddr27rkukm 31 45 Mennonite Mennonite NNP work_cfbskzb7hzha5apjddr27rkukm 31 46 Christian Christian NNP work_cfbskzb7hzha5apjddr27rkukm 31 47 Hospital Hospital NNP work_cfbskzb7hzha5apjddr27rkukm 31 48 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 31 49 eastern eastern NNP work_cfbskzb7hzha5apjddr27rkukm 31 50 region region NN work_cfbskzb7hzha5apjddr27rkukm 31 51 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 31 52 , , , work_cfbskzb7hzha5apjddr27rkukm 31 53 Wan Wan NNP work_cfbskzb7hzha5apjddr27rkukm 31 54 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 31 55 Ciao Ciao NNP work_cfbskzb7hzha5apjddr27rkukm 31 56 Veterans Veterans NNPS work_cfbskzb7hzha5apjddr27rkukm 31 57 Hos- Hos- NNP work_cfbskzb7hzha5apjddr27rkukm 31 58 pital pital JJ work_cfbskzb7hzha5apjddr27rkukm 31 59 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 31 60 central central JJ work_cfbskzb7hzha5apjddr27rkukm 31 61 region region NN work_cfbskzb7hzha5apjddr27rkukm 31 62 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 31 63 , , , work_cfbskzb7hzha5apjddr27rkukm 31 64 Tainan Tainan NNP work_cfbskzb7hzha5apjddr27rkukm 31 65 Chest Chest NNP work_cfbskzb7hzha5apjddr27rkukm 31 66 Hospital Hospital NNP work_cfbskzb7hzha5apjddr27rkukm 31 67 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 31 68 southern southern JJ work_cfbskzb7hzha5apjddr27rkukm 31 69 region region NN work_cfbskzb7hzha5apjddr27rkukm 31 70 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 31 71 , , , work_cfbskzb7hzha5apjddr27rkukm 31 72 and and CC work_cfbskzb7hzha5apjddr27rkukm 31 73 Kaohsiung Kaohsiung NNP work_cfbskzb7hzha5apjddr27rkukm 31 74 Veterans Veterans NNP work_cfbskzb7hzha5apjddr27rkukm 31 75 General General NNP work_cfbskzb7hzha5apjddr27rkukm 31 76 Hospital Hospital NNP work_cfbskzb7hzha5apjddr27rkukm 31 77 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 31 78 southern southern JJ work_cfbskzb7hzha5apjddr27rkukm 31 79 region region NN work_cfbskzb7hzha5apjddr27rkukm 31 80 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 31 81 . . . work_cfbskzb7hzha5apjddr27rkukm 32 1 All all DT work_cfbskzb7hzha5apjddr27rkukm 32 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 32 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 32 4 patients patient NNS work_cfbskzb7hzha5apjddr27rkukm 32 5 were be VBD work_cfbskzb7hzha5apjddr27rkukm 32 6 sputum sputum JJ work_cfbskzb7hzha5apjddr27rkukm 32 7 microscopy microscopy JJ work_cfbskzb7hzha5apjddr27rkukm 32 8 positive positive JJ work_cfbskzb7hzha5apjddr27rkukm 32 9 and and CC work_cfbskzb7hzha5apjddr27rkukm 32 10 culture culture NN work_cfbskzb7hzha5apjddr27rkukm 32 11 positive positive JJ work_cfbskzb7hzha5apjddr27rkukm 32 12 . . . work_cfbskzb7hzha5apjddr27rkukm 33 1 Mycobacterial mycobacterial JJ work_cfbskzb7hzha5apjddr27rkukm 33 2 genomic genomic JJ work_cfbskzb7hzha5apjddr27rkukm 33 3 DNA DNA NNP work_cfbskzb7hzha5apjddr27rkukm 33 4 was be VBD work_cfbskzb7hzha5apjddr27rkukm 33 5 extracted extract VBN work_cfbskzb7hzha5apjddr27rkukm 33 6 from from IN work_cfbskzb7hzha5apjddr27rkukm 33 7 cultured cultured JJ work_cfbskzb7hzha5apjddr27rkukm 33 8 cells cell NNS work_cfbskzb7hzha5apjddr27rkukm 33 9 as as IN work_cfbskzb7hzha5apjddr27rkukm 33 10 described describe VBN work_cfbskzb7hzha5apjddr27rkukm 33 11 previously previously RB work_cfbskzb7hzha5apjddr27rkukm 33 12 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 33 13 21 21 CD work_cfbskzb7hzha5apjddr27rkukm 33 14 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 33 15 . . . work_cfbskzb7hzha5apjddr27rkukm 34 1 Briefly briefly RB work_cfbskzb7hzha5apjddr27rkukm 34 2 , , , work_cfbskzb7hzha5apjddr27rkukm 34 3 mycobacterial mycobacterial NN work_cfbskzb7hzha5apjddr27rkukm 34 4 colonies colony NNS work_cfbskzb7hzha5apjddr27rkukm 34 5 were be VBD work_cfbskzb7hzha5apjddr27rkukm 34 6 resuspended resuspend VBN work_cfbskzb7hzha5apjddr27rkukm 34 7 in in IN work_cfbskzb7hzha5apjddr27rkukm 34 8 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 34 9 – – : work_cfbskzb7hzha5apjddr27rkukm 34 10 200 200 CD work_cfbskzb7hzha5apjddr27rkukm 34 11 lL lL NNP work_cfbskzb7hzha5apjddr27rkukm 34 12 of of IN work_cfbskzb7hzha5apjddr27rkukm 34 13 distilled distilled JJ work_cfbskzb7hzha5apjddr27rkukm 34 14 H2O h2o NN work_cfbskzb7hzha5apjddr27rkukm 34 15 and and CC work_cfbskzb7hzha5apjddr27rkukm 34 16 incubated incubate VBD work_cfbskzb7hzha5apjddr27rkukm 34 17 at at IN work_cfbskzb7hzha5apjddr27rkukm 34 18 85 85 CD work_cfbskzb7hzha5apjddr27rkukm 34 19 � � NNS work_cfbskzb7hzha5apjddr27rkukm 34 20 C C NNP work_cfbskzb7hzha5apjddr27rkukm 34 21 for for IN work_cfbskzb7hzha5apjddr27rkukm 34 22 30 30 CD work_cfbskzb7hzha5apjddr27rkukm 34 23 min min NN work_cfbskzb7hzha5apjddr27rkukm 34 24 to to TO work_cfbskzb7hzha5apjddr27rkukm 34 25 obtain obtain VB work_cfbskzb7hzha5apjddr27rkukm 34 26 genomic genomic JJ work_cfbskzb7hzha5apjddr27rkukm 34 27 DNA dna NN work_cfbskzb7hzha5apjddr27rkukm 34 28 . . . work_cfbskzb7hzha5apjddr27rkukm 35 1 After after IN work_cfbskzb7hzha5apjddr27rkukm 35 2 centrifugation centrifugation NN work_cfbskzb7hzha5apjddr27rkukm 35 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 35 4 the the DT work_cfbskzb7hzha5apjddr27rkukm 35 5 suspension suspension NN work_cfbskzb7hzha5apjddr27rkukm 35 6 , , , work_cfbskzb7hzha5apjddr27rkukm 35 7 the the DT work_cfbskzb7hzha5apjddr27rkukm 35 8 supernatant supernatant JJ work_cfbskzb7hzha5apjddr27rkukm 35 9 containing contain VBG work_cfbskzb7hzha5apjddr27rkukm 35 10 the the DT work_cfbskzb7hzha5apjddr27rkukm 35 11 DNA DNA NNP work_cfbskzb7hzha5apjddr27rkukm 35 12 was be VBD work_cfbskzb7hzha5apjddr27rkukm 35 13 removed remove VBN work_cfbskzb7hzha5apjddr27rkukm 35 14 and and CC work_cfbskzb7hzha5apjddr27rkukm 35 15 stored store VBN work_cfbskzb7hzha5apjddr27rkukm 35 16 at at IN work_cfbskzb7hzha5apjddr27rkukm 35 17 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 35 18 20 20 CD work_cfbskzb7hzha5apjddr27rkukm 35 19 � � NNS work_cfbskzb7hzha5apjddr27rkukm 35 20 C c NN work_cfbskzb7hzha5apjddr27rkukm 35 21 until until IN work_cfbskzb7hzha5apjddr27rkukm 35 22 further further JJ work_cfbskzb7hzha5apjddr27rkukm 35 23 use use NN work_cfbskzb7hzha5apjddr27rkukm 35 24 . . . work_cfbskzb7hzha5apjddr27rkukm 36 1 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 36 2 locus locus NN work_cfbskzb7hzha5apjddr27rkukm 36 3 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 36 4 A a DT work_cfbskzb7hzha5apjddr27rkukm 36 5 multiplex multiplex JJ work_cfbskzb7hzha5apjddr27rkukm 36 6 PCR PCR NNP work_cfbskzb7hzha5apjddr27rkukm 36 7 approach approach NN work_cfbskzb7hzha5apjddr27rkukm 36 8 was be VBD work_cfbskzb7hzha5apjddr27rkukm 36 9 used use VBN work_cfbskzb7hzha5apjddr27rkukm 36 10 to to TO work_cfbskzb7hzha5apjddr27rkukm 36 11 determine determine VB work_cfbskzb7hzha5apjddr27rkukm 36 12 possible possible JJ work_cfbskzb7hzha5apjddr27rkukm 36 13 IS6110 is6110 NN work_cfbskzb7hzha5apjddr27rkukm 36 14 insertion(s insertion( VBN work_cfbskzb7hzha5apjddr27rkukm 36 15 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 36 16 in in IN work_cfbskzb7hzha5apjddr27rkukm 36 17 the the DT work_cfbskzb7hzha5apjddr27rkukm 36 18 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 36 19 region region NN work_cfbskzb7hzha5apjddr27rkukm 36 20 of of IN work_cfbskzb7hzha5apjddr27rkukm 36 21 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 36 22 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 36 23 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 36 24 . . . work_cfbskzb7hzha5apjddr27rkukm 37 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 37 2 method method NN work_cfbskzb7hzha5apjddr27rkukm 37 3 , , , work_cfbskzb7hzha5apjddr27rkukm 37 4 including include VBG work_cfbskzb7hzha5apjddr27rkukm 37 5 primer primer JJ work_cfbskzb7hzha5apjddr27rkukm 37 6 choices choice NNS work_cfbskzb7hzha5apjddr27rkukm 37 7 within within IN work_cfbskzb7hzha5apjddr27rkukm 37 8 the the DT work_cfbskzb7hzha5apjddr27rkukm 37 9 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 37 10 region region NN work_cfbskzb7hzha5apjddr27rkukm 37 11 , , , work_cfbskzb7hzha5apjddr27rkukm 37 12 the the DT work_cfbskzb7hzha5apjddr27rkukm 37 13 IS6110 is6110 NN work_cfbskzb7hzha5apjddr27rkukm 37 14 sequence sequence NN work_cfbskzb7hzha5apjddr27rkukm 37 15 and and CC work_cfbskzb7hzha5apjddr27rkukm 37 16 PCR PCR NNP work_cfbskzb7hzha5apjddr27rkukm 37 17 parameters parameter NNS work_cfbskzb7hzha5apjddr27rkukm 37 18 , , , work_cfbskzb7hzha5apjddr27rkukm 37 19 was be VBD work_cfbskzb7hzha5apjddr27rkukm 37 20 adapted adapt VBN work_cfbskzb7hzha5apjddr27rkukm 37 21 from from IN work_cfbskzb7hzha5apjddr27rkukm 37 22 a a DT work_cfbskzb7hzha5apjddr27rkukm 37 23 paper paper NN work_cfbskzb7hzha5apjddr27rkukm 37 24 by by IN work_cfbskzb7hzha5apjddr27rkukm 37 25 Plikaytis Plikaytis NNP work_cfbskzb7hzha5apjddr27rkukm 37 26 et et NNP work_cfbskzb7hzha5apjddr27rkukm 37 27 al al NNP work_cfbskzb7hzha5apjddr27rkukm 37 28 . . . work_cfbskzb7hzha5apjddr27rkukm 38 1 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 38 2 18 18 CD work_cfbskzb7hzha5apjddr27rkukm 38 3 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 38 4 . . . work_cfbskzb7hzha5apjddr27rkukm 39 1 Detection detection NN work_cfbskzb7hzha5apjddr27rkukm 39 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 39 3 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 39 4 deletions deletion NNS work_cfbskzb7hzha5apjddr27rkukm 39 5 Previous previous JJ work_cfbskzb7hzha5apjddr27rkukm 39 6 studies study NNS work_cfbskzb7hzha5apjddr27rkukm 39 7 have have VBP work_cfbskzb7hzha5apjddr27rkukm 39 8 shown show VBN work_cfbskzb7hzha5apjddr27rkukm 39 9 that that IN work_cfbskzb7hzha5apjddr27rkukm 39 10 the the DT work_cfbskzb7hzha5apjddr27rkukm 39 11 type type NN work_cfbskzb7hzha5apjddr27rkukm 39 12 of of IN work_cfbskzb7hzha5apjddr27rkukm 39 13 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 39 14 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 39 15 correlates correlate VBZ work_cfbskzb7hzha5apjddr27rkukm 39 16 with with IN work_cfbskzb7hzha5apjddr27rkukm 39 17 the the DT work_cfbskzb7hzha5apjddr27rkukm 39 18 relative relative JJ work_cfbskzb7hzha5apjddr27rkukm 39 19 evolutionary evolutionary JJ work_cfbskzb7hzha5apjddr27rkukm 39 20 age age NN work_cfbskzb7hzha5apjddr27rkukm 39 21 of of IN work_cfbskzb7hzha5apjddr27rkukm 39 22 the the DT work_cfbskzb7hzha5apjddr27rkukm 39 23 MTB MTB NNP work_cfbskzb7hzha5apjddr27rkukm 39 24 strain strain NN work_cfbskzb7hzha5apjddr27rkukm 39 25 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 39 26 19 19 CD work_cfbskzb7hzha5apjddr27rkukm 39 27 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 39 28 . . . work_cfbskzb7hzha5apjddr27rkukm 40 1 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 40 2 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 40 3 in in IN work_cfbskzb7hzha5apjddr27rkukm 40 4 our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 40 5 collection collection NN work_cfbskzb7hzha5apjddr27rkukm 40 6 were be VBD work_cfbskzb7hzha5apjddr27rkukm 40 7 further further RB work_cfbskzb7hzha5apjddr27rkukm 40 8 classified classify VBN work_cfbskzb7hzha5apjddr27rkukm 40 9 by by IN work_cfbskzb7hzha5apjddr27rkukm 40 10 using use VBG work_cfbskzb7hzha5apjddr27rkukm 40 11 PCR PCR NNP work_cfbskzb7hzha5apjddr27rkukm 40 12 amplification amplification NN work_cfbskzb7hzha5apjddr27rkukm 40 13 to to TO work_cfbskzb7hzha5apjddr27rkukm 40 14 determine determine VB work_cfbskzb7hzha5apjddr27rkukm 40 15 the the DT work_cfbskzb7hzha5apjddr27rkukm 40 16 pres- pres- NN work_cfbskzb7hzha5apjddr27rkukm 40 17 ence ence NN work_cfbskzb7hzha5apjddr27rkukm 40 18 of of IN work_cfbskzb7hzha5apjddr27rkukm 40 19 an an DT work_cfbskzb7hzha5apjddr27rkukm 40 20 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 40 21 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 40 22 . . . work_cfbskzb7hzha5apjddr27rkukm 41 1 A a DT work_cfbskzb7hzha5apjddr27rkukm 41 2 primer primer NN work_cfbskzb7hzha5apjddr27rkukm 41 3 set set NN work_cfbskzb7hzha5apjddr27rkukm 41 4 was be VBD work_cfbskzb7hzha5apjddr27rkukm 41 5 used use VBN work_cfbskzb7hzha5apjddr27rkukm 41 6 to to TO work_cfbskzb7hzha5apjddr27rkukm 41 7 check check VB work_cfbskzb7hzha5apjddr27rkukm 41 8 for for IN work_cfbskzb7hzha5apjddr27rkukm 41 9 the the DT work_cfbskzb7hzha5apjddr27rkukm 41 10 presence presence NN work_cfbskzb7hzha5apjddr27rkukm 41 11 or or CC work_cfbskzb7hzha5apjddr27rkukm 41 12 absence absence NN work_cfbskzb7hzha5apjddr27rkukm 41 13 of of IN work_cfbskzb7hzha5apjddr27rkukm 41 14 RD105 rd105 NN work_cfbskzb7hzha5apjddr27rkukm 41 15 , , , work_cfbskzb7hzha5apjddr27rkukm 41 16 RD181 RD181 NNP work_cfbskzb7hzha5apjddr27rkukm 41 17 , , , work_cfbskzb7hzha5apjddr27rkukm 41 18 RD150 RD150 NNP work_cfbskzb7hzha5apjddr27rkukm 41 19 , , , work_cfbskzb7hzha5apjddr27rkukm 41 20 RD142 RD142 NNP work_cfbskzb7hzha5apjddr27rkukm 41 21 and and CC work_cfbskzb7hzha5apjddr27rkukm 41 22 RD207 RD207 NNP work_cfbskzb7hzha5apjddr27rkukm 41 23 . . . work_cfbskzb7hzha5apjddr27rkukm 42 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 42 2 PCR PCR NNP work_cfbskzb7hzha5apjddr27rkukm 42 3 mixture mixture NN work_cfbskzb7hzha5apjddr27rkukm 42 4 consisted consist VBD work_cfbskzb7hzha5apjddr27rkukm 42 5 of of IN work_cfbskzb7hzha5apjddr27rkukm 42 6 0.2 0.2 CD work_cfbskzb7hzha5apjddr27rkukm 42 7 lg lg NN work_cfbskzb7hzha5apjddr27rkukm 42 8 DNA DNA NNP work_cfbskzb7hzha5apjddr27rkukm 42 9 tem- tem- NN work_cfbskzb7hzha5apjddr27rkukm 42 10 plate plate NN work_cfbskzb7hzha5apjddr27rkukm 42 11 , , , work_cfbskzb7hzha5apjddr27rkukm 42 12 13.9 13.9 CD work_cfbskzb7hzha5apjddr27rkukm 42 13 lL lL NNP work_cfbskzb7hzha5apjddr27rkukm 42 14 Q Q NNP work_cfbskzb7hzha5apjddr27rkukm 42 15 buffer buffer NNP work_cfbskzb7hzha5apjddr27rkukm 42 16 , , , work_cfbskzb7hzha5apjddr27rkukm 42 17 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 42 18 lL lL NNP work_cfbskzb7hzha5apjddr27rkukm 42 19 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 42 20 · · NFP work_cfbskzb7hzha5apjddr27rkukm 42 21 buffer buffer NN work_cfbskzb7hzha5apjddr27rkukm 42 22 , , , work_cfbskzb7hzha5apjddr27rkukm 42 23 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 42 24 lL lL NNP work_cfbskzb7hzha5apjddr27rkukm 42 25 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 42 26 mM mm NN work_cfbskzb7hzha5apjddr27rkukm 42 27 deoxy- deoxy- JJ work_cfbskzb7hzha5apjddr27rkukm 42 28 nucleoside nucleoside JJ work_cfbskzb7hzha5apjddr27rkukm 42 29 triphosphates triphosphate NNS work_cfbskzb7hzha5apjddr27rkukm 42 30 , , , work_cfbskzb7hzha5apjddr27rkukm 42 31 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 42 32 lL ll NN work_cfbskzb7hzha5apjddr27rkukm 42 33 of of IN work_cfbskzb7hzha5apjddr27rkukm 42 34 each each DT work_cfbskzb7hzha5apjddr27rkukm 42 35 primer primer NN work_cfbskzb7hzha5apjddr27rkukm 42 36 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 42 37 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 42 38 pmol pmol NN work_cfbskzb7hzha5apjddr27rkukm 42 39 / / SYM work_cfbskzb7hzha5apjddr27rkukm 42 40 lL lL NNP work_cfbskzb7hzha5apjddr27rkukm 42 41 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 42 42 , , , work_cfbskzb7hzha5apjddr27rkukm 42 43 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 42 44 lL lL NNP work_cfbskzb7hzha5apjddr27rkukm 42 45 DMSO DMSO NNP work_cfbskzb7hzha5apjddr27rkukm 42 46 , , , work_cfbskzb7hzha5apjddr27rkukm 42 47 and and CC work_cfbskzb7hzha5apjddr27rkukm 42 48 0.6 0.6 CD work_cfbskzb7hzha5apjddr27rkukm 42 49 lL lL NNP work_cfbskzb7hzha5apjddr27rkukm 42 50 Herculase Herculase NNP work_cfbskzb7hzha5apjddr27rkukm 42 51 II II NNP work_cfbskzb7hzha5apjddr27rkukm 42 52 Fusion Fusion NNP work_cfbskzb7hzha5apjddr27rkukm 42 53 DNA dna NN work_cfbskzb7hzha5apjddr27rkukm 42 54 polymer- polymer- NN work_cfbskzb7hzha5apjddr27rkukm 42 55 ase ase NN work_cfbskzb7hzha5apjddr27rkukm 42 56 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 42 57 Stratagene Stratagene NNP work_cfbskzb7hzha5apjddr27rkukm 42 58 , , , work_cfbskzb7hzha5apjddr27rkukm 42 59 La La NNP work_cfbskzb7hzha5apjddr27rkukm 42 60 Jolla Jolla NNP work_cfbskzb7hzha5apjddr27rkukm 42 61 , , , work_cfbskzb7hzha5apjddr27rkukm 42 62 CA CA NNP work_cfbskzb7hzha5apjddr27rkukm 42 63 , , , work_cfbskzb7hzha5apjddr27rkukm 42 64 USA USA NNP work_cfbskzb7hzha5apjddr27rkukm 42 65 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 42 66 . . . work_cfbskzb7hzha5apjddr27rkukm 43 1 Sterile sterile JJ work_cfbskzb7hzha5apjddr27rkukm 43 2 water water NN work_cfbskzb7hzha5apjddr27rkukm 43 3 was be VBD work_cfbskzb7hzha5apjddr27rkukm 43 4 used use VBN work_cfbskzb7hzha5apjddr27rkukm 43 5 to to TO work_cfbskzb7hzha5apjddr27rkukm 43 6 dilute dilute VB work_cfbskzb7hzha5apjddr27rkukm 43 7 the the DT work_cfbskzb7hzha5apjddr27rkukm 43 8 mixture mixture NN work_cfbskzb7hzha5apjddr27rkukm 43 9 up up IN work_cfbskzb7hzha5apjddr27rkukm 43 10 to to TO work_cfbskzb7hzha5apjddr27rkukm 43 11 25 25 CD work_cfbskzb7hzha5apjddr27rkukm 43 12 lL. ll. NN work_cfbskzb7hzha5apjddr27rkukm 44 1 A a DT work_cfbskzb7hzha5apjddr27rkukm 44 2 detailed detailed JJ work_cfbskzb7hzha5apjddr27rkukm 44 3 explanation explanation NN work_cfbskzb7hzha5apjddr27rkukm 44 4 of of IN work_cfbskzb7hzha5apjddr27rkukm 44 5 this this DT work_cfbskzb7hzha5apjddr27rkukm 44 6 methodology methodology NN work_cfbskzb7hzha5apjddr27rkukm 44 7 has have VBZ work_cfbskzb7hzha5apjddr27rkukm 44 8 been be VBN work_cfbskzb7hzha5apjddr27rkukm 44 9 described describe VBN work_cfbskzb7hzha5apjddr27rkukm 44 10 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 44 11 19 19 CD work_cfbskzb7hzha5apjddr27rkukm 44 12 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 44 13 . . . work_cfbskzb7hzha5apjddr27rkukm 45 1 SNP SNP NNP work_cfbskzb7hzha5apjddr27rkukm 45 2 typing type VBG work_cfbskzb7hzha5apjddr27rkukm 45 3 PCR PCR NNP work_cfbskzb7hzha5apjddr27rkukm 45 4 and and CC work_cfbskzb7hzha5apjddr27rkukm 45 5 extension extension NN work_cfbskzb7hzha5apjddr27rkukm 45 6 primers primer NNS work_cfbskzb7hzha5apjddr27rkukm 45 7 were be VBD work_cfbskzb7hzha5apjddr27rkukm 45 8 designed design VBN work_cfbskzb7hzha5apjddr27rkukm 45 9 using use VBG work_cfbskzb7hzha5apjddr27rkukm 45 10 MassArray MassArray NNP work_cfbskzb7hzha5apjddr27rkukm 45 11 Assay Assay NNP work_cfbskzb7hzha5apjddr27rkukm 45 12 Design Design NNP work_cfbskzb7hzha5apjddr27rkukm 45 13 3.1 3.1 CD work_cfbskzb7hzha5apjddr27rkukm 45 14 software software NN work_cfbskzb7hzha5apjddr27rkukm 45 15 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 45 16 Sequenom Sequenom NNP work_cfbskzb7hzha5apjddr27rkukm 45 17 , , , work_cfbskzb7hzha5apjddr27rkukm 45 18 San San NNP work_cfbskzb7hzha5apjddr27rkukm 45 19 Diego Diego NNP work_cfbskzb7hzha5apjddr27rkukm 45 20 , , , work_cfbskzb7hzha5apjddr27rkukm 45 21 CA CA NNP work_cfbskzb7hzha5apjddr27rkukm 45 22 , , , work_cfbskzb7hzha5apjddr27rkukm 45 23 USA USA NNP work_cfbskzb7hzha5apjddr27rkukm 45 24 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 45 25 . . . work_cfbskzb7hzha5apjddr27rkukm 46 1 PCRs pcr NNS work_cfbskzb7hzha5apjddr27rkukm 46 2 contained contain VBN work_cfbskzb7hzha5apjddr27rkukm 46 3 , , , work_cfbskzb7hzha5apjddr27rkukm 46 4 in in IN work_cfbskzb7hzha5apjddr27rkukm 46 5 a a DT work_cfbskzb7hzha5apjddr27rkukm 46 6 volume volume NN work_cfbskzb7hzha5apjddr27rkukm 46 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 46 8 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 46 9 lL lL NNP work_cfbskzb7hzha5apjddr27rkukm 46 10 , , , work_cfbskzb7hzha5apjddr27rkukm 46 11 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 46 12 pmol pmol NN work_cfbskzb7hzha5apjddr27rkukm 46 13 of of IN work_cfbskzb7hzha5apjddr27rkukm 46 14 the the DT work_cfbskzb7hzha5apjddr27rkukm 46 15 corre- corre- NN work_cfbskzb7hzha5apjddr27rkukm 46 16 sponding sponde VBG work_cfbskzb7hzha5apjddr27rkukm 46 17 primers primer NNS work_cfbskzb7hzha5apjddr27rkukm 46 18 , , , work_cfbskzb7hzha5apjddr27rkukm 46 19 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 46 20 ng ng NN work_cfbskzb7hzha5apjddr27rkukm 46 21 genomic genomic JJ work_cfbskzb7hzha5apjddr27rkukm 46 22 DNA DNA NNP work_cfbskzb7hzha5apjddr27rkukm 46 23 and and CC work_cfbskzb7hzha5apjddr27rkukm 46 24 HotStar HotStar NNP work_cfbskzb7hzha5apjddr27rkukm 46 25 reaction reaction NN work_cfbskzb7hzha5apjddr27rkukm 46 26 Mix Mix NNP work_cfbskzb7hzha5apjddr27rkukm 46 27 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 46 28 Qiagen Qiagen NNP work_cfbskzb7hzha5apjddr27rkukm 46 29 , , , work_cfbskzb7hzha5apjddr27rkukm 46 30 Valenca Valenca NNP work_cfbskzb7hzha5apjddr27rkukm 46 31 , , , work_cfbskzb7hzha5apjddr27rkukm 46 32 CA CA NNP work_cfbskzb7hzha5apjddr27rkukm 46 33 , , , work_cfbskzb7hzha5apjddr27rkukm 46 34 USA USA NNP work_cfbskzb7hzha5apjddr27rkukm 46 35 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 46 36 in in IN work_cfbskzb7hzha5apjddr27rkukm 46 37 384-well 384-well CD work_cfbskzb7hzha5apjddr27rkukm 46 38 plates plate NNS work_cfbskzb7hzha5apjddr27rkukm 46 39 . . . work_cfbskzb7hzha5apjddr27rkukm 47 1 PCR PCR NNP work_cfbskzb7hzha5apjddr27rkukm 47 2 condi- condi- NNP work_cfbskzb7hzha5apjddr27rkukm 47 3 tions tion NNS work_cfbskzb7hzha5apjddr27rkukm 47 4 were be VBD work_cfbskzb7hzha5apjddr27rkukm 47 5 as as IN work_cfbskzb7hzha5apjddr27rkukm 47 6 follows follow VBZ work_cfbskzb7hzha5apjddr27rkukm 47 7 : : : work_cfbskzb7hzha5apjddr27rkukm 47 8 94 94 CD work_cfbskzb7hzha5apjddr27rkukm 47 9 � � NNP work_cfbskzb7hzha5apjddr27rkukm 47 10 C C NNP work_cfbskzb7hzha5apjddr27rkukm 47 11 for for IN work_cfbskzb7hzha5apjddr27rkukm 47 12 15 15 CD work_cfbskzb7hzha5apjddr27rkukm 47 13 min min NN work_cfbskzb7hzha5apjddr27rkukm 47 14 , , , work_cfbskzb7hzha5apjddr27rkukm 47 15 followed follow VBN work_cfbskzb7hzha5apjddr27rkukm 47 16 by by IN work_cfbskzb7hzha5apjddr27rkukm 47 17 40 40 CD work_cfbskzb7hzha5apjddr27rkukm 47 18 cycles cycle NNS work_cfbskzb7hzha5apjddr27rkukm 47 19 of of IN work_cfbskzb7hzha5apjddr27rkukm 47 20 94 94 CD work_cfbskzb7hzha5apjddr27rkukm 47 21 � � NNS work_cfbskzb7hzha5apjddr27rkukm 47 22 C C NNP work_cfbskzb7hzha5apjddr27rkukm 47 23 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 47 24 20 20 CD work_cfbskzb7hzha5apjddr27rkukm 47 25 s s NNPS work_cfbskzb7hzha5apjddr27rkukm 47 26 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 47 27 , , , work_cfbskzb7hzha5apjddr27rkukm 47 28 56 56 CD work_cfbskzb7hzha5apjddr27rkukm 47 29 � � NN work_cfbskzb7hzha5apjddr27rkukm 47 30 C C NNP work_cfbskzb7hzha5apjddr27rkukm 47 31 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 47 32 30 30 CD work_cfbskzb7hzha5apjddr27rkukm 47 33 s s NN work_cfbskzb7hzha5apjddr27rkukm 47 34 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 47 35 and and CC work_cfbskzb7hzha5apjddr27rkukm 47 36 72 72 CD work_cfbskzb7hzha5apjddr27rkukm 47 37 � � NNP work_cfbskzb7hzha5apjddr27rkukm 47 38 C C NNP work_cfbskzb7hzha5apjddr27rkukm 47 39 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 47 40 60 60 CD work_cfbskzb7hzha5apjddr27rkukm 47 41 s s NNP work_cfbskzb7hzha5apjddr27rkukm 47 42 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 47 43 , , , work_cfbskzb7hzha5apjddr27rkukm 47 44 and and CC work_cfbskzb7hzha5apjddr27rkukm 47 45 a a DT work_cfbskzb7hzha5apjddr27rkukm 47 46 final final JJ work_cfbskzb7hzha5apjddr27rkukm 47 47 exten- exten- JJ work_cfbskzb7hzha5apjddr27rkukm 47 48 sion sion NN work_cfbskzb7hzha5apjddr27rkukm 47 49 of of IN work_cfbskzb7hzha5apjddr27rkukm 47 50 72 72 CD work_cfbskzb7hzha5apjddr27rkukm 47 51 � � NNP work_cfbskzb7hzha5apjddr27rkukm 47 52 C C NNP work_cfbskzb7hzha5apjddr27rkukm 47 53 for for IN work_cfbskzb7hzha5apjddr27rkukm 47 54 3 3 CD work_cfbskzb7hzha5apjddr27rkukm 47 55 min min NN work_cfbskzb7hzha5apjddr27rkukm 47 56 . . . work_cfbskzb7hzha5apjddr27rkukm 48 1 In in IN work_cfbskzb7hzha5apjddr27rkukm 48 2 the the DT work_cfbskzb7hzha5apjddr27rkukm 48 3 primer primer JJ work_cfbskzb7hzha5apjddr27rkukm 48 4 extension extension NN work_cfbskzb7hzha5apjddr27rkukm 48 5 procedure procedure NN work_cfbskzb7hzha5apjddr27rkukm 48 6 , , , work_cfbskzb7hzha5apjddr27rkukm 48 7 each each DT work_cfbskzb7hzha5apjddr27rkukm 48 8 sample sample NN work_cfbskzb7hzha5apjddr27rkukm 48 9 was be VBD work_cfbskzb7hzha5apjddr27rkukm 48 10 denatured denature VBN work_cfbskzb7hzha5apjddr27rkukm 48 11 at at IN work_cfbskzb7hzha5apjddr27rkukm 48 12 94 94 CD work_cfbskzb7hzha5apjddr27rkukm 48 13 � � NNP work_cfbskzb7hzha5apjddr27rkukm 48 14 C C NNP work_cfbskzb7hzha5apjddr27rkukm 48 15 , , , work_cfbskzb7hzha5apjddr27rkukm 48 16 followed follow VBN work_cfbskzb7hzha5apjddr27rkukm 48 17 by by IN work_cfbskzb7hzha5apjddr27rkukm 48 18 40 40 CD work_cfbskzb7hzha5apjddr27rkukm 48 19 cycles cycle NNS work_cfbskzb7hzha5apjddr27rkukm 48 20 of of IN work_cfbskzb7hzha5apjddr27rkukm 48 21 94 94 CD work_cfbskzb7hzha5apjddr27rkukm 48 22 � � NNP work_cfbskzb7hzha5apjddr27rkukm 48 23 C C NNP work_cfbskzb7hzha5apjddr27rkukm 48 24 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 48 25 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 48 26 s s NNP work_cfbskzb7hzha5apjddr27rkukm 48 27 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 48 28 , , , work_cfbskzb7hzha5apjddr27rkukm 48 29 52 52 CD work_cfbskzb7hzha5apjddr27rkukm 48 30 � � NNP work_cfbskzb7hzha5apjddr27rkukm 48 31 C C NNP work_cfbskzb7hzha5apjddr27rkukm 48 32 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 48 33 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 48 34 s s NN work_cfbskzb7hzha5apjddr27rkukm 48 35 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 48 36 and and CC work_cfbskzb7hzha5apjddr27rkukm 48 37 72 72 CD work_cfbskzb7hzha5apjddr27rkukm 48 38 � � NNP work_cfbskzb7hzha5apjddr27rkukm 48 39 C C NNP work_cfbskzb7hzha5apjddr27rkukm 48 40 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 48 41 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 48 42 s s NN work_cfbskzb7hzha5apjddr27rkukm 48 43 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 48 44 . . . work_cfbskzb7hzha5apjddr27rkukm 49 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 49 2 mass mass NN work_cfbskzb7hzha5apjddr27rkukm 49 3 spectrum spectrum NN work_cfbskzb7hzha5apjddr27rkukm 49 4 from from IN work_cfbskzb7hzha5apjddr27rkukm 49 5 time time NN work_cfbskzb7hzha5apjddr27rkukm 49 6 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 49 7 resolved resolve VBN work_cfbskzb7hzha5apjddr27rkukm 49 8 spectra spectra NNP work_cfbskzb7hzha5apjddr27rkukm 49 9 was be VBD work_cfbskzb7hzha5apjddr27rkukm 49 10 retrieved retrieve VBN work_cfbskzb7hzha5apjddr27rkukm 49 11 by by IN work_cfbskzb7hzha5apjddr27rkukm 49 12 using use VBG work_cfbskzb7hzha5apjddr27rkukm 49 13 a a DT work_cfbskzb7hzha5apjddr27rkukm 49 14 Mass- Mass- NNP work_cfbskzb7hzha5apjddr27rkukm 49 15 Array Array NNP work_cfbskzb7hzha5apjddr27rkukm 49 16 mass mass NN work_cfbskzb7hzha5apjddr27rkukm 49 17 spectrometer spectrometer NN work_cfbskzb7hzha5apjddr27rkukm 49 18 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 49 19 Sequenom Sequenom NNP work_cfbskzb7hzha5apjddr27rkukm 49 20 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 49 21 , , , work_cfbskzb7hzha5apjddr27rkukm 49 22 and and CC work_cfbskzb7hzha5apjddr27rkukm 49 23 each each DT work_cfbskzb7hzha5apjddr27rkukm 49 24 spectrum spectrum NN work_cfbskzb7hzha5apjddr27rkukm 49 25 was be VBD work_cfbskzb7hzha5apjddr27rkukm 49 26 then then RB work_cfbskzb7hzha5apjddr27rkukm 49 27 analysed analyse VBN work_cfbskzb7hzha5apjddr27rkukm 49 28 using use VBG work_cfbskzb7hzha5apjddr27rkukm 49 29 SpectroTyper SpectroTyper NNP work_cfbskzb7hzha5apjddr27rkukm 49 30 software software NN work_cfbskzb7hzha5apjddr27rkukm 49 31 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 49 32 Sequenom Sequenom NNP work_cfbskzb7hzha5apjddr27rkukm 49 33 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 49 34 to to TO work_cfbskzb7hzha5apjddr27rkukm 49 35 perform perform VB work_cfbskzb7hzha5apjddr27rkukm 49 36 the the DT work_cfbskzb7hzha5apjddr27rkukm 49 37 genotype genotype NN work_cfbskzb7hzha5apjddr27rkukm 49 38 calling call VBG work_cfbskzb7hzha5apjddr27rkukm 49 39 . . . work_cfbskzb7hzha5apjddr27rkukm 50 1 Although although IN work_cfbskzb7hzha5apjddr27rkukm 50 2 the the DT work_cfbskzb7hzha5apjddr27rkukm 50 3 application application NN work_cfbskzb7hzha5apjddr27rkukm 50 4 of of IN work_cfbskzb7hzha5apjddr27rkukm 50 5 mass mass NNP work_cfbskzb7hzha5apjddr27rkukm 50 6 spectrometry spectrometry NN work_cfbskzb7hzha5apjddr27rkukm 50 7 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 50 8 based base VBN work_cfbskzb7hzha5apjddr27rkukm 50 9 genotyping genotyping NN work_cfbskzb7hzha5apjddr27rkukm 50 10 of of IN work_cfbskzb7hzha5apjddr27rkukm 50 11 the the DT work_cfbskzb7hzha5apjddr27rkukm 50 12 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 50 13 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 50 14 genome genome JJ work_cfbskzb7hzha5apjddr27rkukm 50 15 had have VBD work_cfbskzb7hzha5apjddr27rkukm 50 16 been be VBN work_cfbskzb7hzha5apjddr27rkukm 50 17 demonstrated demonstrate VBN work_cfbskzb7hzha5apjddr27rkukm 50 18 in in IN work_cfbskzb7hzha5apjddr27rkukm 50 19 previous previous JJ work_cfbskzb7hzha5apjddr27rkukm 50 20 studies study NNS work_cfbskzb7hzha5apjddr27rkukm 50 21 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 50 22 22,23 22,23 CD work_cfbskzb7hzha5apjddr27rkukm 50 23 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 50 24 , , , work_cfbskzb7hzha5apjddr27rkukm 50 25 the the DT work_cfbskzb7hzha5apjddr27rkukm 50 26 Sanger Sanger NNP work_cfbskzb7hzha5apjddr27rkukm 50 27 sequencing sequencing NN work_cfbskzb7hzha5apjddr27rkukm 50 28 method method NN work_cfbskzb7hzha5apjddr27rkukm 50 29 was be VBD work_cfbskzb7hzha5apjddr27rkukm 50 30 used use VBN work_cfbskzb7hzha5apjddr27rkukm 50 31 to to TO work_cfbskzb7hzha5apjddr27rkukm 50 32 validate validate VB work_cfbskzb7hzha5apjddr27rkukm 50 33 600 600 CD work_cfbskzb7hzha5apjddr27rkukm 50 34 ran- ran- NN work_cfbskzb7hzha5apjddr27rkukm 50 35 domly domly RB work_cfbskzb7hzha5apjddr27rkukm 50 36 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 50 37 selected select VBN work_cfbskzb7hzha5apjddr27rkukm 50 38 SNP SNP NNP work_cfbskzb7hzha5apjddr27rkukm 50 39 calls call VBZ work_cfbskzb7hzha5apjddr27rkukm 50 40 . . . work_cfbskzb7hzha5apjddr27rkukm 51 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 51 2 false false JJ work_cfbskzb7hzha5apjddr27rkukm 51 3 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 51 4 positive positive JJ work_cfbskzb7hzha5apjddr27rkukm 51 5 and and CC work_cfbskzb7hzha5apjddr27rkukm 51 6 false false JJ work_cfbskzb7hzha5apjddr27rkukm 51 7 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 51 8 negative negative JJ work_cfbskzb7hzha5apjddr27rkukm 51 9 rates rate NNS work_cfbskzb7hzha5apjddr27rkukm 51 10 of of IN work_cfbskzb7hzha5apjddr27rkukm 51 11 mass mass NNP work_cfbskzb7hzha5apjddr27rkukm 51 12 spectrometry spectrometry NN work_cfbskzb7hzha5apjddr27rkukm 51 13 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 51 14 based base VBN work_cfbskzb7hzha5apjddr27rkukm 51 15 genotyping genotyping NN work_cfbskzb7hzha5apjddr27rkukm 51 16 in in IN work_cfbskzb7hzha5apjddr27rkukm 51 17 this this DT work_cfbskzb7hzha5apjddr27rkukm 51 18 study study NN work_cfbskzb7hzha5apjddr27rkukm 51 19 are be VBP work_cfbskzb7hzha5apjddr27rkukm 51 20 both both RB work_cfbskzb7hzha5apjddr27rkukm 51 21 equal equal JJ work_cfbskzb7hzha5apjddr27rkukm 51 22 to to IN work_cfbskzb7hzha5apjddr27rkukm 51 23 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 51 24 % % NN work_cfbskzb7hzha5apjddr27rkukm 51 25 , , , work_cfbskzb7hzha5apjddr27rkukm 51 26 showing show VBG work_cfbskzb7hzha5apjddr27rkukm 51 27 that that IN work_cfbskzb7hzha5apjddr27rkukm 51 28 the the DT work_cfbskzb7hzha5apjddr27rkukm 51 29 results result NNS work_cfbskzb7hzha5apjddr27rkukm 51 30 of of IN work_cfbskzb7hzha5apjddr27rkukm 51 31 mass mass JJ work_cfbskzb7hzha5apjddr27rkukm 51 32 spectrome- spectrome- NN work_cfbskzb7hzha5apjddr27rkukm 51 33 try try NN work_cfbskzb7hzha5apjddr27rkukm 51 34 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 51 35 based base VBN work_cfbskzb7hzha5apjddr27rkukm 51 36 genotyping genotyping NN work_cfbskzb7hzha5apjddr27rkukm 51 37 are be VBP work_cfbskzb7hzha5apjddr27rkukm 51 38 highly highly RB work_cfbskzb7hzha5apjddr27rkukm 51 39 accurate accurate JJ work_cfbskzb7hzha5apjddr27rkukm 51 40 and and CC work_cfbskzb7hzha5apjddr27rkukm 51 41 sensitive sensitive JJ work_cfbskzb7hzha5apjddr27rkukm 51 42 . . . work_cfbskzb7hzha5apjddr27rkukm 52 1 Results result NNS work_cfbskzb7hzha5apjddr27rkukm 52 2 Molecular molecular JJ work_cfbskzb7hzha5apjddr27rkukm 52 3 polymorphisms polymorphism NNS work_cfbskzb7hzha5apjddr27rkukm 52 4 and and CC work_cfbskzb7hzha5apjddr27rkukm 52 5 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 52 6 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 52 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 52 8 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 52 9 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 52 10 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 52 11 isolates isolate VBZ work_cfbskzb7hzha5apjddr27rkukm 52 12 From from IN work_cfbskzb7hzha5apjddr27rkukm 52 13 a a DT work_cfbskzb7hzha5apjddr27rkukm 52 14 collection collection NN work_cfbskzb7hzha5apjddr27rkukm 52 15 of of IN work_cfbskzb7hzha5apjddr27rkukm 52 16 338 338 CD work_cfbskzb7hzha5apjddr27rkukm 52 17 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 52 18 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 52 19 a a DT work_cfbskzb7hzha5apjddr27rkukm 52 20 total total NN work_cfbskzb7hzha5apjddr27rkukm 52 21 of of IN work_cfbskzb7hzha5apjddr27rkukm 52 22 nine nine CD work_cfbskzb7hzha5apjddr27rkukm 52 23 inde- inde- NN work_cfbskzb7hzha5apjddr27rkukm 52 24 pendently pendently RB work_cfbskzb7hzha5apjddr27rkukm 52 25 evolving evolve VBG work_cfbskzb7hzha5apjddr27rkukm 52 26 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 52 27 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 52 28 were be VBD work_cfbskzb7hzha5apjddr27rkukm 52 29 identified identify VBN work_cfbskzb7hzha5apjddr27rkukm 52 30 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 52 31 Table table NN work_cfbskzb7hzha5apjddr27rkukm 52 32 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 52 33 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 52 34 . . . work_cfbskzb7hzha5apjddr27rkukm 53 1 Two two CD work_cfbskzb7hzha5apjddr27rkukm 53 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 53 3 these these DT work_cfbskzb7hzha5apjddr27rkukm 53 4 , , , work_cfbskzb7hzha5apjddr27rkukm 53 5 ST11 ST11 NNP work_cfbskzb7hzha5apjddr27rkukm 53 6 and and CC work_cfbskzb7hzha5apjddr27rkukm 53 7 ST26 ST26 NNP work_cfbskzb7hzha5apjddr27rkukm 53 8 , , , work_cfbskzb7hzha5apjddr27rkukm 53 9 each each DT work_cfbskzb7hzha5apjddr27rkukm 53 10 possessing possess VBG work_cfbskzb7hzha5apjddr27rkukm 53 11 intact intact JJ work_cfbskzb7hzha5apjddr27rkukm 53 12 RD181 rd181 NN work_cfbskzb7hzha5apjddr27rkukm 53 13 and and CC work_cfbskzb7hzha5apjddr27rkukm 53 14 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 53 15 regions region NNS work_cfbskzb7hzha5apjddr27rkukm 53 16 , , , work_cfbskzb7hzha5apjddr27rkukm 53 17 correspond correspond VBP work_cfbskzb7hzha5apjddr27rkukm 53 18 to to IN work_cfbskzb7hzha5apjddr27rkukm 53 19 ancient ancient JJ work_cfbskzb7hzha5apjddr27rkukm 53 20 sublin- sublin- JJ work_cfbskzb7hzha5apjddr27rkukm 53 21 eages eage NNS work_cfbskzb7hzha5apjddr27rkukm 53 22 whilst whilst IN work_cfbskzb7hzha5apjddr27rkukm 53 23 the the DT work_cfbskzb7hzha5apjddr27rkukm 53 24 rest rest NN work_cfbskzb7hzha5apjddr27rkukm 53 25 correspond correspond NN work_cfbskzb7hzha5apjddr27rkukm 53 26 to to IN work_cfbskzb7hzha5apjddr27rkukm 53 27 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 53 28 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 53 29 : : : work_cfbskzb7hzha5apjddr27rkukm 53 30 ST3 ST3 NNP work_cfbskzb7hzha5apjddr27rkukm 53 31 , , , work_cfbskzb7hzha5apjddr27rkukm 53 32 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 53 33 , , , work_cfbskzb7hzha5apjddr27rkukm 53 34 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 53 35 , , , work_cfbskzb7hzha5apjddr27rkukm 53 36 ST22 ST22 NNP work_cfbskzb7hzha5apjddr27rkukm 53 37 , , , work_cfbskzb7hzha5apjddr27rkukm 53 38 ST25 ST25 NNP work_cfbskzb7hzha5apjddr27rkukm 53 39 , , , work_cfbskzb7hzha5apjddr27rkukm 53 40 STK STK NNP work_cfbskzb7hzha5apjddr27rkukm 53 41 , , , work_cfbskzb7hzha5apjddr27rkukm 53 42 and and CC work_cfbskzb7hzha5apjddr27rkukm 53 43 newly newly RB work_cfbskzb7hzha5apjddr27rkukm 53 44 assigned assign VBN work_cfbskzb7hzha5apjddr27rkukm 53 45 STN STN NNP work_cfbskzb7hzha5apjddr27rkukm 53 46 in in IN work_cfbskzb7hzha5apjddr27rkukm 53 47 this this DT work_cfbskzb7hzha5apjddr27rkukm 53 48 study study NN work_cfbskzb7hzha5apjddr27rkukm 53 49 ; ; : work_cfbskzb7hzha5apjddr27rkukm 53 50 all all DT work_cfbskzb7hzha5apjddr27rkukm 53 51 possess possess VBP work_cfbskzb7hzha5apjddr27rkukm 53 52 an an DT work_cfbskzb7hzha5apjddr27rkukm 53 53 RD181 rd181 JJ work_cfbskzb7hzha5apjddr27rkukm 53 54 region region NN work_cfbskzb7hzha5apjddr27rkukm 53 55 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 53 56 and and CC work_cfbskzb7hzha5apjddr27rkukm 53 57 some some DT work_cfbskzb7hzha5apjddr27rkukm 53 58 of of IN work_cfbskzb7hzha5apjddr27rkukm 53 59 them -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 53 60 have have VBP work_cfbskzb7hzha5apjddr27rkukm 53 61 an an DT work_cfbskzb7hzha5apjddr27rkukm 53 62 IS6110 is6110 NN work_cfbskzb7hzha5apjddr27rkukm 53 63 insertion insertion NN work_cfbskzb7hzha5apjddr27rkukm 53 64 on on IN work_cfbskzb7hzha5apjddr27rkukm 53 65 the the DT work_cfbskzb7hzha5apjddr27rkukm 53 66 right right JJ work_cfbskzb7hzha5apjddr27rkukm 53 67 side side NN work_cfbskzb7hzha5apjddr27rkukm 53 68 of of IN work_cfbskzb7hzha5apjddr27rkukm 53 69 the the DT work_cfbskzb7hzha5apjddr27rkukm 53 70 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 53 71 region region NN work_cfbskzb7hzha5apjddr27rkukm 53 72 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 53 73 14,16,17,19 14,16,17,19 NNP work_cfbskzb7hzha5apjddr27rkukm 53 74 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 53 75 . . . work_cfbskzb7hzha5apjddr27rkukm 54 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 54 2 most most RBS work_cfbskzb7hzha5apjddr27rkukm 54 3 frequent frequent JJ work_cfbskzb7hzha5apjddr27rkukm 54 4 strain strain NN work_cfbskzb7hzha5apjddr27rkukm 54 5 found find VBN work_cfbskzb7hzha5apjddr27rkukm 54 6 was be VBD work_cfbskzb7hzha5apjddr27rkukm 54 7 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 54 8 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 54 9 53.3 53.3 CD work_cfbskzb7hzha5apjddr27rkukm 54 10 % % NN work_cfbskzb7hzha5apjddr27rkukm 54 11 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 54 12 , , , work_cfbskzb7hzha5apjddr27rkukm 54 13 followed follow VBN work_cfbskzb7hzha5apjddr27rkukm 54 14 by by IN work_cfbskzb7hzha5apjddr27rkukm 54 15 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 54 16 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 54 17 14.8 14.8 CD work_cfbskzb7hzha5apjddr27rkukm 54 18 % % NN work_cfbskzb7hzha5apjddr27rkukm 54 19 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 54 20 and and CC work_cfbskzb7hzha5apjddr27rkukm 54 21 ST22 ST22 NNP work_cfbskzb7hzha5apjddr27rkukm 54 22 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 54 23 14.5 14.5 CD work_cfbskzb7hzha5apjddr27rkukm 54 24 % % NN work_cfbskzb7hzha5apjddr27rkukm 54 25 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 54 26 , , , work_cfbskzb7hzha5apjddr27rkukm 54 27 which which WDT work_cfbskzb7hzha5apjddr27rkukm 54 28 all all DT work_cfbskzb7hzha5apjddr27rkukm 54 29 belong belong VBP work_cfbskzb7hzha5apjddr27rkukm 54 30 to to IN work_cfbskzb7hzha5apjddr27rkukm 54 31 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 54 32 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 54 33 . . . work_cfbskzb7hzha5apjddr27rkukm 55 1 1392 1392 CD work_cfbskzb7hzha5apjddr27rkukm 55 2 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 55 3 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 55 4 and and CC work_cfbskzb7hzha5apjddr27rkukm 55 5 Infection Infection NNP work_cfbskzb7hzha5apjddr27rkukm 55 6 , , , work_cfbskzb7hzha5apjddr27rkukm 55 7 Volume volume NN work_cfbskzb7hzha5apjddr27rkukm 55 8 17 17 CD work_cfbskzb7hzha5apjddr27rkukm 55 9 Number number NN work_cfbskzb7hzha5apjddr27rkukm 55 10 9 9 CD work_cfbskzb7hzha5apjddr27rkukm 55 11 , , , work_cfbskzb7hzha5apjddr27rkukm 55 12 September September NNP work_cfbskzb7hzha5apjddr27rkukm 55 13 2011 2011 CD work_cfbskzb7hzha5apjddr27rkukm 55 14 CMI CMI NNP work_cfbskzb7hzha5apjddr27rkukm 55 15 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 55 16 The the DT work_cfbskzb7hzha5apjddr27rkukm 55 17 Authors Authors NNPS work_cfbskzb7hzha5apjddr27rkukm 55 18 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 55 19 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 55 20 and and CC work_cfbskzb7hzha5apjddr27rkukm 55 21 Infection Infection NNP work_cfbskzb7hzha5apjddr27rkukm 55 22 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 55 23 European European NNP work_cfbskzb7hzha5apjddr27rkukm 55 24 Society Society NNP work_cfbskzb7hzha5apjddr27rkukm 55 25 of of IN work_cfbskzb7hzha5apjddr27rkukm 55 26 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 55 27 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 55 28 and and CC work_cfbskzb7hzha5apjddr27rkukm 55 29 Infectious Infectious NNP work_cfbskzb7hzha5apjddr27rkukm 55 30 Diseases Diseases NNPS work_cfbskzb7hzha5apjddr27rkukm 55 31 , , , work_cfbskzb7hzha5apjddr27rkukm 55 32 CMI CMI NNP work_cfbskzb7hzha5apjddr27rkukm 55 33 , , , work_cfbskzb7hzha5apjddr27rkukm 55 34 17 17 CD work_cfbskzb7hzha5apjddr27rkukm 55 35 , , , work_cfbskzb7hzha5apjddr27rkukm 55 36 1391–1396 1391–1396 CD work_cfbskzb7hzha5apjddr27rkukm 55 37 All all DT work_cfbskzb7hzha5apjddr27rkukm 55 38 338 338 CD work_cfbskzb7hzha5apjddr27rkukm 55 39 clinical clinical JJ work_cfbskzb7hzha5apjddr27rkukm 55 40 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 55 41 were be VBD work_cfbskzb7hzha5apjddr27rkukm 55 42 tested test VBN work_cfbskzb7hzha5apjddr27rkukm 55 43 for for IN work_cfbskzb7hzha5apjddr27rkukm 55 44 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 55 45 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 55 46 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 55 47 isoniazid isoniazid NN work_cfbskzb7hzha5apjddr27rkukm 55 48 , , , work_cfbskzb7hzha5apjddr27rkukm 55 49 rifampicin rifampicin NNS work_cfbskzb7hzha5apjddr27rkukm 55 50 , , , work_cfbskzb7hzha5apjddr27rkukm 55 51 ethambutol ethambutol NNP work_cfbskzb7hzha5apjddr27rkukm 55 52 and and CC work_cfbskzb7hzha5apjddr27rkukm 55 53 streptomycin streptomycin NNP work_cfbskzb7hzha5apjddr27rkukm 55 54 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 55 55 and and CC work_cfbskzb7hzha5apjddr27rkukm 55 56 clas- clas- NNP work_cfbskzb7hzha5apjddr27rkukm 55 57 sified sifie VBD work_cfbskzb7hzha5apjddr27rkukm 55 58 as as IN work_cfbskzb7hzha5apjddr27rkukm 55 59 either either DT work_cfbskzb7hzha5apjddr27rkukm 55 60 sensitive sensitive JJ work_cfbskzb7hzha5apjddr27rkukm 55 61 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 55 62 S S NNP work_cfbskzb7hzha5apjddr27rkukm 55 63 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 55 64 to to IN work_cfbskzb7hzha5apjddr27rkukm 55 65 all all DT work_cfbskzb7hzha5apjddr27rkukm 55 66 four four CD work_cfbskzb7hzha5apjddr27rkukm 55 67 drugs drug NNS work_cfbskzb7hzha5apjddr27rkukm 55 68 , , , work_cfbskzb7hzha5apjddr27rkukm 55 69 resistant resistant JJ work_cfbskzb7hzha5apjddr27rkukm 55 70 to to IN work_cfbskzb7hzha5apjddr27rkukm 55 71 any any DT work_cfbskzb7hzha5apjddr27rkukm 55 72 one one CD work_cfbskzb7hzha5apjddr27rkukm 55 73 of of IN work_cfbskzb7hzha5apjddr27rkukm 55 74 the the DT work_cfbskzb7hzha5apjddr27rkukm 55 75 drugs drug NNS work_cfbskzb7hzha5apjddr27rkukm 55 76 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 55 77 R r NN work_cfbskzb7hzha5apjddr27rkukm 55 78 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 55 79 , , , work_cfbskzb7hzha5apjddr27rkukm 55 80 or or CC work_cfbskzb7hzha5apjddr27rkukm 55 81 multi multi JJ work_cfbskzb7hzha5apjddr27rkukm 55 82 - - JJ work_cfbskzb7hzha5apjddr27rkukm 55 83 drug drug JJ work_cfbskzb7hzha5apjddr27rkukm 55 84 resistant resistant JJ work_cfbskzb7hzha5apjddr27rkukm 55 85 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 55 86 MDR MDR NNP work_cfbskzb7hzha5apjddr27rkukm 55 87 ; ; : work_cfbskzb7hzha5apjddr27rkukm 55 88 resistant resistant JJ work_cfbskzb7hzha5apjddr27rkukm 55 89 to to IN work_cfbskzb7hzha5apjddr27rkukm 55 90 isoniazid isoniazid NN work_cfbskzb7hzha5apjddr27rkukm 55 91 and and CC work_cfbskzb7hzha5apjddr27rkukm 55 92 rifampicin rifampicin NNS work_cfbskzb7hzha5apjddr27rkukm 55 93 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 55 94 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 55 95 Table table NN work_cfbskzb7hzha5apjddr27rkukm 55 96 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 55 97 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 55 98 . . . work_cfbskzb7hzha5apjddr27rkukm 56 1 Of of IN work_cfbskzb7hzha5apjddr27rkukm 56 2 the the DT work_cfbskzb7hzha5apjddr27rkukm 56 3 nine nine CD work_cfbskzb7hzha5apjddr27rkukm 56 4 lineages lineage NNS work_cfbskzb7hzha5apjddr27rkukm 56 5 , , , work_cfbskzb7hzha5apjddr27rkukm 56 6 ST26 ST26 NNP work_cfbskzb7hzha5apjddr27rkukm 56 7 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 56 8 associated associate VBN work_cfbskzb7hzha5apjddr27rkukm 56 9 with with IN work_cfbskzb7hzha5apjddr27rkukm 56 10 a a DT work_cfbskzb7hzha5apjddr27rkukm 56 11 higher high JJR work_cfbskzb7hzha5apjddr27rkukm 56 12 percentage percentage NN work_cfbskzb7hzha5apjddr27rkukm 56 13 of of IN work_cfbskzb7hzha5apjddr27rkukm 56 14 MDR MDR NNP work_cfbskzb7hzha5apjddr27rkukm 56 15 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 56 16 18.5 18.5 CD work_cfbskzb7hzha5apjddr27rkukm 56 17 % % NN work_cfbskzb7hzha5apjddr27rkukm 56 18 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 56 19 as as IN work_cfbskzb7hzha5apjddr27rkukm 56 20 compared compare VBN work_cfbskzb7hzha5apjddr27rkukm 56 21 with with IN work_cfbskzb7hzha5apjddr27rkukm 56 22 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 56 23 of of IN work_cfbskzb7hzha5apjddr27rkukm 56 24 all all DT work_cfbskzb7hzha5apjddr27rkukm 56 25 other other JJ work_cfbskzb7hzha5apjddr27rkukm 56 26 eight eight CD work_cfbskzb7hzha5apjddr27rkukm 56 27 lineages lineage NNS work_cfbskzb7hzha5apjddr27rkukm 56 28 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 56 29 6.43 6.43 CD work_cfbskzb7hzha5apjddr27rkukm 56 30 % % NN work_cfbskzb7hzha5apjddr27rkukm 56 31 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 56 32 , , , work_cfbskzb7hzha5apjddr27rkukm 56 33 with with IN work_cfbskzb7hzha5apjddr27rkukm 56 34 the the DT work_cfbskzb7hzha5apjddr27rkukm 56 35 difference difference NN work_cfbskzb7hzha5apjddr27rkukm 56 36 being be VBG work_cfbskzb7hzha5apjddr27rkukm 56 37 statistically statistically RB work_cfbskzb7hzha5apjddr27rkukm 56 38 significant significant JJ work_cfbskzb7hzha5apjddr27rkukm 56 39 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 56 40 p p NN work_cfbskzb7hzha5apjddr27rkukm 56 41 0.038 0.038 CD work_cfbskzb7hzha5apjddr27rkukm 56 42 by by IN work_cfbskzb7hzha5apjddr27rkukm 56 43 exact exact JJ work_cfbskzb7hzha5apjddr27rkukm 56 44 test test NN work_cfbskzb7hzha5apjddr27rkukm 56 45 ; ; : work_cfbskzb7hzha5apjddr27rkukm 56 46 Table table NN work_cfbskzb7hzha5apjddr27rkukm 56 47 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 56 48 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 56 49 . . . work_cfbskzb7hzha5apjddr27rkukm 57 1 Chuang Chuang NNP work_cfbskzb7hzha5apjddr27rkukm 57 2 et et NNP work_cfbskzb7hzha5apjddr27rkukm 57 3 al al NNP work_cfbskzb7hzha5apjddr27rkukm 57 4 . . . work_cfbskzb7hzha5apjddr27rkukm 58 1 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 58 2 24 24 CD work_cfbskzb7hzha5apjddr27rkukm 58 3 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 58 4 reported report VBD work_cfbskzb7hzha5apjddr27rkukm 58 5 that that IN work_cfbskzb7hzha5apjddr27rkukm 58 6 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 58 7 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 58 8 sublineag- sublineag- NN work_cfbskzb7hzha5apjddr27rkukm 58 9 es es VB work_cfbskzb7hzha5apjddr27rkukm 58 10 can can MD work_cfbskzb7hzha5apjddr27rkukm 58 11 be be VB work_cfbskzb7hzha5apjddr27rkukm 58 12 distinguished distinguish VBN work_cfbskzb7hzha5apjddr27rkukm 58 13 from from IN work_cfbskzb7hzha5apjddr27rkukm 58 14 ancient ancient JJ work_cfbskzb7hzha5apjddr27rkukm 58 15 lineages lineage NNS work_cfbskzb7hzha5apjddr27rkukm 58 16 based base VBN work_cfbskzb7hzha5apjddr27rkukm 58 17 on on IN work_cfbskzb7hzha5apjddr27rkukm 58 18 SNPs snp NNS work_cfbskzb7hzha5apjddr27rkukm 58 19 in in IN work_cfbskzb7hzha5apjddr27rkukm 58 20 the the DT work_cfbskzb7hzha5apjddr27rkukm 58 21 antigen antigen NN work_cfbskzb7hzha5apjddr27rkukm 58 22 85 85 CD work_cfbskzb7hzha5apjddr27rkukm 58 23 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 58 24 Ag85 Ag85 NNP work_cfbskzb7hzha5apjddr27rkukm 58 25 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 58 26 complex complex JJ work_cfbskzb7hzha5apjddr27rkukm 58 27 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 58 28 fbpA fbpA NFP work_cfbskzb7hzha5apjddr27rkukm 58 29 and and CC work_cfbskzb7hzha5apjddr27rkukm 58 30 fbpB. fbpb. JJ work_cfbskzb7hzha5apjddr27rkukm 59 1 In in IN work_cfbskzb7hzha5apjddr27rkukm 59 2 our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 59 3 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 59 4 , , , work_cfbskzb7hzha5apjddr27rkukm 59 5 none none NN work_cfbskzb7hzha5apjddr27rkukm 59 6 of of IN work_cfbskzb7hzha5apjddr27rkukm 59 7 the the DT work_cfbskzb7hzha5apjddr27rkukm 59 8 ancient ancient JJ work_cfbskzb7hzha5apjddr27rkukm 59 9 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 59 10 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 59 11 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 59 12 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 59 13 type type NN work_cfbskzb7hzha5apjddr27rkukm 59 14 1–2 1–2 CD work_cfbskzb7hzha5apjddr27rkukm 59 15 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 59 16 were be VBD work_cfbskzb7hzha5apjddr27rkukm 59 17 found find VBN work_cfbskzb7hzha5apjddr27rkukm 59 18 to to TO work_cfbskzb7hzha5apjddr27rkukm 59 19 have have VB work_cfbskzb7hzha5apjddr27rkukm 59 20 an an DT work_cfbskzb7hzha5apjddr27rkukm 59 21 SNP SNP NNP work_cfbskzb7hzha5apjddr27rkukm 59 22 in in IN work_cfbskzb7hzha5apjddr27rkukm 59 23 the the DT work_cfbskzb7hzha5apjddr27rkukm 59 24 fbpA fbpa NN work_cfbskzb7hzha5apjddr27rkukm 59 25 or or CC work_cfbskzb7hzha5apjddr27rkukm 59 26 fbpB fbpb NN work_cfbskzb7hzha5apjddr27rkukm 59 27 gene gene NN work_cfbskzb7hzha5apjddr27rkukm 59 28 ; ; : work_cfbskzb7hzha5apjddr27rkukm 59 29 however however RB work_cfbskzb7hzha5apjddr27rkukm 59 30 , , , work_cfbskzb7hzha5apjddr27rkukm 59 31 the the DT work_cfbskzb7hzha5apjddr27rkukm 59 32 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 59 33 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 59 34 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 59 35 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 59 36 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 59 37 type type NN work_cfbskzb7hzha5apjddr27rkukm 59 38 3–6 3–6 CD work_cfbskzb7hzha5apjddr27rkukm 59 39 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 59 40 were be VBD work_cfbskzb7hzha5apjddr27rkukm 59 41 found find VBN work_cfbskzb7hzha5apjddr27rkukm 59 42 to to TO work_cfbskzb7hzha5apjddr27rkukm 59 43 carry carry VB work_cfbskzb7hzha5apjddr27rkukm 59 44 an an DT work_cfbskzb7hzha5apjddr27rkukm 59 45 SNP SNP NNP work_cfbskzb7hzha5apjddr27rkukm 59 46 in in IN work_cfbskzb7hzha5apjddr27rkukm 59 47 fbpB fbpB JJR work_cfbskzb7hzha5apjddr27rkukm 59 48 codon codon NNP work_cfbskzb7hzha5apjddr27rkukm 59 49 238 238 CD work_cfbskzb7hzha5apjddr27rkukm 59 50 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 59 51 Table table NN work_cfbskzb7hzha5apjddr27rkukm 59 52 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 59 53 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 59 54 . . . work_cfbskzb7hzha5apjddr27rkukm 60 1 We -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 60 2 also also RB work_cfbskzb7hzha5apjddr27rkukm 60 3 tested test VBD work_cfbskzb7hzha5apjddr27rkukm 60 4 the the DT work_cfbskzb7hzha5apjddr27rkukm 60 5 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 60 6 for for IN work_cfbskzb7hzha5apjddr27rkukm 60 7 the the DT work_cfbskzb7hzha5apjddr27rkukm 60 8 presence presence NN work_cfbskzb7hzha5apjddr27rkukm 60 9 of of IN work_cfbskzb7hzha5apjddr27rkukm 60 10 missense missense NN work_cfbskzb7hzha5apjddr27rkukm 60 11 mutations mutation NNS work_cfbskzb7hzha5apjddr27rkukm 60 12 in in IN work_cfbskzb7hzha5apjddr27rkukm 60 13 mutT2 mutt2 ADD work_cfbskzb7hzha5apjddr27rkukm 60 14 , , , work_cfbskzb7hzha5apjddr27rkukm 60 15 mutT4 mutt4 ADD work_cfbskzb7hzha5apjddr27rkukm 60 16 , , , work_cfbskzb7hzha5apjddr27rkukm 60 17 ogt12 ogt12 NN work_cfbskzb7hzha5apjddr27rkukm 60 18 and and CC work_cfbskzb7hzha5apjddr27rkukm 60 19 ogt37 ogt37 NNS work_cfbskzb7hzha5apjddr27rkukm 60 20 , , , work_cfbskzb7hzha5apjddr27rkukm 60 21 which which WDT work_cfbskzb7hzha5apjddr27rkukm 60 22 are be VBP work_cfbskzb7hzha5apjddr27rkukm 60 23 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 60 24 encoding encode VBG work_cfbskzb7hzha5apjddr27rkukm 60 25 putative putative JJ work_cfbskzb7hzha5apjddr27rkukm 60 26 DNA dna NN work_cfbskzb7hzha5apjddr27rkukm 60 27 repair repair NN work_cfbskzb7hzha5apjddr27rkukm 60 28 enzymes enzyme NNS work_cfbskzb7hzha5apjddr27rkukm 60 29 . . . work_cfbskzb7hzha5apjddr27rkukm 61 1 Mutations mutation NNS work_cfbskzb7hzha5apjddr27rkukm 61 2 in in IN work_cfbskzb7hzha5apjddr27rkukm 61 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 61 4 four four CD work_cfbskzb7hzha5apjddr27rkukm 61 5 putative putative JJ work_cfbskzb7hzha5apjddr27rkukm 61 6 repair repair NN work_cfbskzb7hzha5apjddr27rkukm 61 7 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 61 8 were be VBD work_cfbskzb7hzha5apjddr27rkukm 61 9 detected detect VBN work_cfbskzb7hzha5apjddr27rkukm 61 10 with with IN work_cfbskzb7hzha5apjddr27rkukm 61 11 variable variable JJ work_cfbskzb7hzha5apjddr27rkukm 61 12 per- per- NN work_cfbskzb7hzha5apjddr27rkukm 61 13 centages centage NNS work_cfbskzb7hzha5apjddr27rkukm 61 14 in in IN work_cfbskzb7hzha5apjddr27rkukm 61 15 all all DT work_cfbskzb7hzha5apjddr27rkukm 61 16 of of IN work_cfbskzb7hzha5apjddr27rkukm 61 17 the the DT work_cfbskzb7hzha5apjddr27rkukm 61 18 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 61 19 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 61 20 ST3 ST3 NNP work_cfbskzb7hzha5apjddr27rkukm 61 21 , , , work_cfbskzb7hzha5apjddr27rkukm 61 22 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 61 23 , , , work_cfbskzb7hzha5apjddr27rkukm 61 24 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 61 25 , , , work_cfbskzb7hzha5apjddr27rkukm 61 26 ST22 ST22 NNP work_cfbskzb7hzha5apjddr27rkukm 61 27 , , , work_cfbskzb7hzha5apjddr27rkukm 61 28 ST25 ST25 NNP work_cfbskzb7hzha5apjddr27rkukm 61 29 , , , work_cfbskzb7hzha5apjddr27rkukm 61 30 STK STK NNP work_cfbskzb7hzha5apjddr27rkukm 61 31 and and CC work_cfbskzb7hzha5apjddr27rkukm 61 32 STN STN NNP work_cfbskzb7hzha5apjddr27rkukm 61 33 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 61 34 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 61 35 . . . work_cfbskzb7hzha5apjddr27rkukm 62 1 However however RB work_cfbskzb7hzha5apjddr27rkukm 62 2 , , , work_cfbskzb7hzha5apjddr27rkukm 62 3 mutations mutation NNS work_cfbskzb7hzha5apjddr27rkukm 62 4 were be VBD work_cfbskzb7hzha5apjddr27rkukm 62 5 not not RB work_cfbskzb7hzha5apjddr27rkukm 62 6 observed observe VBN work_cfbskzb7hzha5apjddr27rkukm 62 7 in in IN work_cfbskzb7hzha5apjddr27rkukm 62 8 the the DT work_cfbskzb7hzha5apjddr27rkukm 62 9 ST11 ST11 NNP work_cfbskzb7hzha5apjddr27rkukm 62 10 and and CC work_cfbskzb7hzha5apjddr27rkukm 62 11 ST26 ST26 NNP work_cfbskzb7hzha5apjddr27rkukm 62 12 ancient ancient JJ work_cfbskzb7hzha5apjddr27rkukm 62 13 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 62 14 , , , work_cfbskzb7hzha5apjddr27rkukm 62 15 the the DT work_cfbskzb7hzha5apjddr27rkukm 62 16 lat- lat- NN work_cfbskzb7hzha5apjddr27rkukm 62 17 ter ter NN work_cfbskzb7hzha5apjddr27rkukm 62 18 of of IN work_cfbskzb7hzha5apjddr27rkukm 62 19 which which WDT work_cfbskzb7hzha5apjddr27rkukm 62 20 had have VBD work_cfbskzb7hzha5apjddr27rkukm 62 21 the the DT work_cfbskzb7hzha5apjddr27rkukm 62 22 highest high JJS work_cfbskzb7hzha5apjddr27rkukm 62 23 rate rate NN work_cfbskzb7hzha5apjddr27rkukm 62 24 of of IN work_cfbskzb7hzha5apjddr27rkukm 62 25 MDR MDR NNP work_cfbskzb7hzha5apjddr27rkukm 62 26 . . . work_cfbskzb7hzha5apjddr27rkukm 63 1 Thus thus RB work_cfbskzb7hzha5apjddr27rkukm 63 2 , , , work_cfbskzb7hzha5apjddr27rkukm 63 3 our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 63 4 data datum NNS work_cfbskzb7hzha5apjddr27rkukm 63 5 suggest suggest VBP work_cfbskzb7hzha5apjddr27rkukm 63 6 that that IN work_cfbskzb7hzha5apjddr27rkukm 63 7 mutations mutation NNS work_cfbskzb7hzha5apjddr27rkukm 63 8 in in IN work_cfbskzb7hzha5apjddr27rkukm 63 9 these these DT work_cfbskzb7hzha5apjddr27rkukm 63 10 DNA dna NN work_cfbskzb7hzha5apjddr27rkukm 63 11 repair repair NN work_cfbskzb7hzha5apjddr27rkukm 63 12 enzymes enzyme NNS work_cfbskzb7hzha5apjddr27rkukm 63 13 may may MD work_cfbskzb7hzha5apjddr27rkukm 63 14 more more RBR work_cfbskzb7hzha5apjddr27rkukm 63 15 likely likely RB work_cfbskzb7hzha5apjddr27rkukm 63 16 be be VB work_cfbskzb7hzha5apjddr27rkukm 63 17 present present JJ work_cfbskzb7hzha5apjddr27rkukm 63 18 in in IN work_cfbskzb7hzha5apjddr27rkukm 63 19 the the DT work_cfbskzb7hzha5apjddr27rkukm 63 20 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 63 21 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 63 22 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 63 23 , , , work_cfbskzb7hzha5apjddr27rkukm 63 24 but but CC work_cfbskzb7hzha5apjddr27rkukm 63 25 they -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 63 26 were be VBD work_cfbskzb7hzha5apjddr27rkukm 63 27 not not RB work_cfbskzb7hzha5apjddr27rkukm 63 28 associated associate VBN work_cfbskzb7hzha5apjddr27rkukm 63 29 with with IN work_cfbskzb7hzha5apjddr27rkukm 63 30 the the DT work_cfbskzb7hzha5apjddr27rkukm 63 31 presence presence NN work_cfbskzb7hzha5apjddr27rkukm 63 32 of of IN work_cfbskzb7hzha5apjddr27rkukm 63 33 MDR MDR NNP work_cfbskzb7hzha5apjddr27rkukm 63 34 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 63 35 Table table NN work_cfbskzb7hzha5apjddr27rkukm 63 36 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 63 37 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 63 38 . . . work_cfbskzb7hzha5apjddr27rkukm 64 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 64 2 relatively relatively RB work_cfbskzb7hzha5apjddr27rkukm 64 3 high high JJ work_cfbskzb7hzha5apjddr27rkukm 64 4 rate rate NN work_cfbskzb7hzha5apjddr27rkukm 64 5 of of IN work_cfbskzb7hzha5apjddr27rkukm 64 6 cluster cluster NN work_cfbskzb7hzha5apjddr27rkukm 64 7 formation formation NN work_cfbskzb7hzha5apjddr27rkukm 64 8 that that WDT work_cfbskzb7hzha5apjddr27rkukm 64 9 was be VBD work_cfbskzb7hzha5apjddr27rkukm 64 10 found find VBN work_cfbskzb7hzha5apjddr27rkukm 64 11 in in IN work_cfbskzb7hzha5apjddr27rkukm 64 12 the the DT work_cfbskzb7hzha5apjddr27rkukm 64 13 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 64 14 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 64 15 , , , work_cfbskzb7hzha5apjddr27rkukm 64 16 as as IN work_cfbskzb7hzha5apjddr27rkukm 64 17 observed observe VBN work_cfbskzb7hzha5apjddr27rkukm 64 18 by by IN work_cfbskzb7hzha5apjddr27rkukm 64 19 24-MIRU 24-miru CD work_cfbskzb7hzha5apjddr27rkukm 64 20 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 64 21 VNTR vntr NN work_cfbskzb7hzha5apjddr27rkukm 64 22 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 64 23 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 64 24 Table table NN work_cfbskzb7hzha5apjddr27rkukm 64 25 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 64 26 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 64 27 , , , work_cfbskzb7hzha5apjddr27rkukm 64 28 suggests suggest VBZ work_cfbskzb7hzha5apjddr27rkukm 64 29 the the DT work_cfbskzb7hzha5apjddr27rkukm 64 30 occurrence occurrence NN work_cfbskzb7hzha5apjddr27rkukm 64 31 of of IN work_cfbskzb7hzha5apjddr27rkukm 64 32 recent recent JJ work_cfbskzb7hzha5apjddr27rkukm 64 33 trans- trans- JJ work_cfbskzb7hzha5apjddr27rkukm 64 34 mission mission NN work_cfbskzb7hzha5apjddr27rkukm 64 35 at at IN work_cfbskzb7hzha5apjddr27rkukm 64 36 a a DT work_cfbskzb7hzha5apjddr27rkukm 64 37 significant significant JJ work_cfbskzb7hzha5apjddr27rkukm 64 38 frequency frequency NN work_cfbskzb7hzha5apjddr27rkukm 64 39 . . . work_cfbskzb7hzha5apjddr27rkukm 65 1 Phylogenetic phylogenetic JJ work_cfbskzb7hzha5apjddr27rkukm 65 2 classification classification NN work_cfbskzb7hzha5apjddr27rkukm 65 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 65 4 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 65 5 family family NN work_cfbskzb7hzha5apjddr27rkukm 65 6 isolates isolate VBZ work_cfbskzb7hzha5apjddr27rkukm 65 7 based base VBN work_cfbskzb7hzha5apjddr27rkukm 65 8 on on IN work_cfbskzb7hzha5apjddr27rkukm 65 9 MIRU MIRU NNP work_cfbskzb7hzha5apjddr27rkukm 65 10 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 65 11 VNTR vntr NN work_cfbskzb7hzha5apjddr27rkukm 65 12 typing typing NN work_cfbskzb7hzha5apjddr27rkukm 65 13 and and CC work_cfbskzb7hzha5apjddr27rkukm 65 14 RD rd NN work_cfbskzb7hzha5apjddr27rkukm 65 15 typing type VBG work_cfbskzb7hzha5apjddr27rkukm 65 16 The the DT work_cfbskzb7hzha5apjddr27rkukm 65 17 phylogenetic phylogenetic JJ work_cfbskzb7hzha5apjddr27rkukm 65 18 classification classification NN work_cfbskzb7hzha5apjddr27rkukm 65 19 was be VBD work_cfbskzb7hzha5apjddr27rkukm 65 20 projected project VBN work_cfbskzb7hzha5apjddr27rkukm 65 21 into into IN work_cfbskzb7hzha5apjddr27rkukm 65 22 a a DT work_cfbskzb7hzha5apjddr27rkukm 65 23 cluster cluster NN work_cfbskzb7hzha5apjddr27rkukm 65 24 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 65 25 of of IN work_cfbskzb7hzha5apjddr27rkukm 65 26 24-MIRU 24-miru CD work_cfbskzb7hzha5apjddr27rkukm 65 27 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 65 28 VNTR vntr NN work_cfbskzb7hzha5apjddr27rkukm 65 29 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 65 30 Fig fig NN work_cfbskzb7hzha5apjddr27rkukm 65 31 . . . work_cfbskzb7hzha5apjddr27rkukm 66 1 1 1 LS work_cfbskzb7hzha5apjddr27rkukm 66 2 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 66 3 . . . work_cfbskzb7hzha5apjddr27rkukm 67 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 67 2 majority majority NN work_cfbskzb7hzha5apjddr27rkukm 67 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 67 4 the the DT work_cfbskzb7hzha5apjddr27rkukm 67 5 mod- mod- NN work_cfbskzb7hzha5apjddr27rkukm 67 6 ern ern NNP work_cfbskzb7hzha5apjddr27rkukm 67 7 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 67 8 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 67 9 were be VBD work_cfbskzb7hzha5apjddr27rkukm 67 10 not not RB work_cfbskzb7hzha5apjddr27rkukm 67 11 clustered cluster VBN work_cfbskzb7hzha5apjddr27rkukm 67 12 according accord VBG work_cfbskzb7hzha5apjddr27rkukm 67 13 to to IN work_cfbskzb7hzha5apjddr27rkukm 67 14 their -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 67 15 ST ST NNP work_cfbskzb7hzha5apjddr27rkukm 67 16 classifications classification NNS work_cfbskzb7hzha5apjddr27rkukm 67 17 . . . work_cfbskzb7hzha5apjddr27rkukm 68 1 Amongst amongst IN work_cfbskzb7hzha5apjddr27rkukm 68 2 these these DT work_cfbskzb7hzha5apjddr27rkukm 68 3 , , , work_cfbskzb7hzha5apjddr27rkukm 68 4 the the DT work_cfbskzb7hzha5apjddr27rkukm 68 5 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 68 6 ST22 ST22 NNP work_cfbskzb7hzha5apjddr27rkukm 68 7 and and CC work_cfbskzb7hzha5apjddr27rkukm 68 8 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 68 9 were be VBD work_cfbskzb7hzha5apjddr27rkukm 68 10 actually actually RB work_cfbskzb7hzha5apjddr27rkukm 68 11 merged merge VBN work_cfbskzb7hzha5apjddr27rkukm 68 12 together together RB work_cfbskzb7hzha5apjddr27rkukm 68 13 in in IN work_cfbskzb7hzha5apjddr27rkukm 68 14 the the DT work_cfbskzb7hzha5apjddr27rkukm 68 15 tree tree NN work_cfbskzb7hzha5apjddr27rkukm 68 16 . . . work_cfbskzb7hzha5apjddr27rkukm 69 1 Similar similar JJ work_cfbskzb7hzha5apjddr27rkukm 69 2 results result NNS work_cfbskzb7hzha5apjddr27rkukm 69 3 were be VBD work_cfbskzb7hzha5apjddr27rkukm 69 4 reported report VBN work_cfbskzb7hzha5apjddr27rkukm 69 5 in in IN work_cfbskzb7hzha5apjddr27rkukm 69 6 a a DT work_cfbskzb7hzha5apjddr27rkukm 69 7 recent recent JJ work_cfbskzb7hzha5apjddr27rkukm 69 8 study study NN work_cfbskzb7hzha5apjddr27rkukm 69 9 in in IN work_cfbskzb7hzha5apjddr27rkukm 69 10 Japan Japan NNP work_cfbskzb7hzha5apjddr27rkukm 69 11 , , , work_cfbskzb7hzha5apjddr27rkukm 69 12 in in IN work_cfbskzb7hzha5apjddr27rkukm 69 13 which which WDT work_cfbskzb7hzha5apjddr27rkukm 69 14 the the DT work_cfbskzb7hzha5apjddr27rkukm 69 15 phylo- phylo- NNP work_cfbskzb7hzha5apjddr27rkukm 69 16 genetic genetic JJ work_cfbskzb7hzha5apjddr27rkukm 69 17 interpretation interpretation NN work_cfbskzb7hzha5apjddr27rkukm 69 18 based base VBN work_cfbskzb7hzha5apjddr27rkukm 69 19 on on IN work_cfbskzb7hzha5apjddr27rkukm 69 20 MIRU MIRU NNP work_cfbskzb7hzha5apjddr27rkukm 69 21 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 69 22 VNTR vntr NN work_cfbskzb7hzha5apjddr27rkukm 69 23 genotyping genotyping NN work_cfbskzb7hzha5apjddr27rkukm 69 24 also also RB work_cfbskzb7hzha5apjddr27rkukm 69 25 TABLE TABLE VBZ work_cfbskzb7hzha5apjddr27rkukm 69 26 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 69 27 . . . work_cfbskzb7hzha5apjddr27rkukm 70 1 Distribution distribution NN work_cfbskzb7hzha5apjddr27rkukm 70 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 70 3 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 70 4 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 70 5 and and CC work_cfbskzb7hzha5apjddr27rkukm 70 6 various various JJ work_cfbskzb7hzha5apjddr27rkukm 70 7 genetic genetic JJ work_cfbskzb7hzha5apjddr27rkukm 70 8 characteristics characteristic NNS work_cfbskzb7hzha5apjddr27rkukm 70 9 of of IN work_cfbskzb7hzha5apjddr27rkukm 70 10 each each DT work_cfbskzb7hzha5apjddr27rkukm 70 11 sublineage sublineage NN work_cfbskzb7hzha5apjddr27rkukm 70 12 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 70 13 sublineage sublineage NN work_cfbskzb7hzha5apjddr27rkukm 70 14 a a DT work_cfbskzb7hzha5apjddr27rkukm 70 15 Allele Allele NNP work_cfbskzb7hzha5apjddr27rkukm 70 16 in in IN work_cfbskzb7hzha5apjddr27rkukm 70 17 indicated indicate VBN work_cfbskzb7hzha5apjddr27rkukm 70 18 SNP SNP NNP work_cfbskzb7hzha5apjddr27rkukm 70 19 position position NN work_cfbskzb7hzha5apjddr27rkukm 70 20 of of IN work_cfbskzb7hzha5apjddr27rkukm 70 21 H37Rv H37Rv NNP work_cfbskzb7hzha5apjddr27rkukm 70 22 Age Age NNP work_cfbskzb7hzha5apjddr27rkukm 70 23 No no UH work_cfbskzb7hzha5apjddr27rkukm 70 24 . . . work_cfbskzb7hzha5apjddr27rkukm 71 1 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 2 % % NN work_cfbskzb7hzha5apjddr27rkukm 71 3 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 4 of of IN work_cfbskzb7hzha5apjddr27rkukm 71 5 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 71 6 of of IN work_cfbskzb7hzha5apjddr27rkukm 71 7 the the DT work_cfbskzb7hzha5apjddr27rkukm 71 8 indicated indicate VBN work_cfbskzb7hzha5apjddr27rkukm 71 9 strain strain NN work_cfbskzb7hzha5apjddr27rkukm 71 10 797 797 CD work_cfbskzb7hzha5apjddr27rkukm 71 11 736 736 CD work_cfbskzb7hzha5apjddr27rkukm 71 12 909 909 CD work_cfbskzb7hzha5apjddr27rkukm 71 13 166 166 CD work_cfbskzb7hzha5apjddr27rkukm 71 14 147 147 CD work_cfbskzb7hzha5apjddr27rkukm 71 15 759 759 CD work_cfbskzb7hzha5apjddr27rkukm 71 16 154 154 CD work_cfbskzb7hzha5apjddr27rkukm 71 17 814 814 CD work_cfbskzb7hzha5apjddr27rkukm 71 18 169 169 CD work_cfbskzb7hzha5apjddr27rkukm 71 19 206 206 CD work_cfbskzb7hzha5apjddr27rkukm 71 20 189 189 CD work_cfbskzb7hzha5apjddr27rkukm 71 21 201 201 CD work_cfbskzb7hzha5apjddr27rkukm 71 22 237 237 CD work_cfbskzb7hzha5apjddr27rkukm 71 23 613 613 CD work_cfbskzb7hzha5apjddr27rkukm 71 24 253 253 CD work_cfbskzb7hzha5apjddr27rkukm 71 25 261 261 CD work_cfbskzb7hzha5apjddr27rkukm 71 26 282 282 CD work_cfbskzb7hzha5apjddr27rkukm 71 27 558 558 CD work_cfbskzb7hzha5apjddr27rkukm 71 28 413 413 CD work_cfbskzb7hzha5apjddr27rkukm 71 29 782 782 CD work_cfbskzb7hzha5apjddr27rkukm 71 30 S s NN work_cfbskzb7hzha5apjddr27rkukm 71 31 b b NN work_cfbskzb7hzha5apjddr27rkukm 71 32 R R NNP work_cfbskzb7hzha5apjddr27rkukm 71 33 c c NNP work_cfbskzb7hzha5apjddr27rkukm 71 34 MDR MDR NNP work_cfbskzb7hzha5apjddr27rkukm 71 35 d d NNP work_cfbskzb7hzha5apjddr27rkukm 71 36 ST11(4 ST11(4 NNP work_cfbskzb7hzha5apjddr27rkukm 71 37 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 38 C C NNP work_cfbskzb7hzha5apjddr27rkukm 71 39 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 40 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 41 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 42 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 43 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 44 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 45 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 46 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 47 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 48 57.5 57.5 CD work_cfbskzb7hzha5apjddr27rkukm 71 49 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 71 50 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 51 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 71 52 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 53 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 54 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 71 55 ST26(27 st26(27 NN work_cfbskzb7hzha5apjddr27rkukm 71 56 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 57 C C NNP work_cfbskzb7hzha5apjddr27rkukm 71 58 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 59 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 60 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 61 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 62 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 63 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 64 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 65 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 66 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 67 53.5 53.5 CD work_cfbskzb7hzha5apjddr27rkukm 71 68 18 18 CD work_cfbskzb7hzha5apjddr27rkukm 71 69 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 70 66.7 66.7 CD work_cfbskzb7hzha5apjddr27rkukm 71 71 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 72 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 71 73 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 74 14.8 14.8 CD work_cfbskzb7hzha5apjddr27rkukm 71 75 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 76 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 71 77 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 78 18.5 18.5 CD work_cfbskzb7hzha5apjddr27rkukm 71 79 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 80 ST3(13 ST3(13 NNP work_cfbskzb7hzha5apjddr27rkukm 71 81 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 82 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 83 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 84 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 85 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 86 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 87 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 88 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 89 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 90 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 91 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 92 61.6 61.6 CD work_cfbskzb7hzha5apjddr27rkukm 71 93 8 8 CD work_cfbskzb7hzha5apjddr27rkukm 71 94 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 95 61.5 61.5 CD work_cfbskzb7hzha5apjddr27rkukm 71 96 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 97 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 71 98 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 99 38.5 38.5 CD work_cfbskzb7hzha5apjddr27rkukm 71 100 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 101 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 102 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 103 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 104 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 105 STK(4 stk(4 NN work_cfbskzb7hzha5apjddr27rkukm 71 106 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 107 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 108 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 109 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 110 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 111 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 112 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 113 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 114 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 115 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 116 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 117 69 69 CD work_cfbskzb7hzha5apjddr27rkukm 71 118 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 71 119 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 120 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 71 121 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 122 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 123 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 124 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 71 125 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 126 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 127 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 128 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 129 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 130 ST19(50 st19(50 NN work_cfbskzb7hzha5apjddr27rkukm 71 131 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 132 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 133 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 134 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 135 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 136 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 137 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 138 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 139 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 140 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 141 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 142 64.1 64.1 CD work_cfbskzb7hzha5apjddr27rkukm 71 143 41 41 CD work_cfbskzb7hzha5apjddr27rkukm 71 144 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 145 82 82 CD work_cfbskzb7hzha5apjddr27rkukm 71 146 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 147 6 6 CD work_cfbskzb7hzha5apjddr27rkukm 71 148 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 149 12 12 CD work_cfbskzb7hzha5apjddr27rkukm 71 150 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 151 3 3 CD work_cfbskzb7hzha5apjddr27rkukm 71 152 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 153 6 6 CD work_cfbskzb7hzha5apjddr27rkukm 71 154 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 155 ST25(7 st25(7 ADD work_cfbskzb7hzha5apjddr27rkukm 71 156 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 157 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 158 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 159 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 160 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 161 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 162 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 163 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 164 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 165 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 166 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 167 52.2 52.2 CD work_cfbskzb7hzha5apjddr27rkukm 71 168 6 6 CD work_cfbskzb7hzha5apjddr27rkukm 71 169 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 170 85.7 85.7 CD work_cfbskzb7hzha5apjddr27rkukm 71 171 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 172 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 71 173 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 174 14.3 14.3 CD work_cfbskzb7hzha5apjddr27rkukm 71 175 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 176 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 177 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 178 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 179 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 180 ST22(49 st22(49 NN work_cfbskzb7hzha5apjddr27rkukm 71 181 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 182 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 183 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 184 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 185 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 186 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 187 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 188 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 189 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 190 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 191 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 192 65.3 65.3 CD work_cfbskzb7hzha5apjddr27rkukm 71 193 41 41 CD work_cfbskzb7hzha5apjddr27rkukm 71 194 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 195 83.7 83.7 CD work_cfbskzb7hzha5apjddr27rkukm 71 196 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 197 8 8 CD work_cfbskzb7hzha5apjddr27rkukm 71 198 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 199 16.3 16.3 CD work_cfbskzb7hzha5apjddr27rkukm 71 200 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 201 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 202 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 203 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 204 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 205 ST10(180 st10(180 NN work_cfbskzb7hzha5apjddr27rkukm 71 206 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 207 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 208 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 209 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 210 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 211 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 212 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 213 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 214 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 215 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 216 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 217 58.4 58.4 CD work_cfbskzb7hzha5apjddr27rkukm 71 218 142 142 CD work_cfbskzb7hzha5apjddr27rkukm 71 219 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 220 78.9 78.9 CD work_cfbskzb7hzha5apjddr27rkukm 71 221 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 222 24 24 CD work_cfbskzb7hzha5apjddr27rkukm 71 223 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 224 13.3 13.3 CD work_cfbskzb7hzha5apjddr27rkukm 71 225 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 226 14 14 CD work_cfbskzb7hzha5apjddr27rkukm 71 227 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 228 7.8 7.8 CD work_cfbskzb7hzha5apjddr27rkukm 71 229 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 230 STN(4 stn(4 NN work_cfbskzb7hzha5apjddr27rkukm 71 231 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 232 e e NNP work_cfbskzb7hzha5apjddr27rkukm 71 233 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 234 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 235 T t NN work_cfbskzb7hzha5apjddr27rkukm 71 236 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 237 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 238 C c NN work_cfbskzb7hzha5apjddr27rkukm 71 239 A a NN work_cfbskzb7hzha5apjddr27rkukm 71 240 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 241 G g NN work_cfbskzb7hzha5apjddr27rkukm 71 242 T T NNP work_cfbskzb7hzha5apjddr27rkukm 71 243 63 63 CD work_cfbskzb7hzha5apjddr27rkukm 71 244 3 3 CD work_cfbskzb7hzha5apjddr27rkukm 71 245 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 246 75 75 CD work_cfbskzb7hzha5apjddr27rkukm 71 247 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 248 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 71 249 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 250 25 25 CD work_cfbskzb7hzha5apjddr27rkukm 71 251 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 252 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 253 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 254 0 0 NFP work_cfbskzb7hzha5apjddr27rkukm 71 255 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 256 Total total NN work_cfbskzb7hzha5apjddr27rkukm 71 257 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 258 338 338 CD work_cfbskzb7hzha5apjddr27rkukm 71 259 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 260 267 267 CD work_cfbskzb7hzha5apjddr27rkukm 71 261 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 262 79 79 CD work_cfbskzb7hzha5apjddr27rkukm 71 263 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 264 49 49 CD work_cfbskzb7hzha5apjddr27rkukm 71 265 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 266 14.5 14.5 CD work_cfbskzb7hzha5apjddr27rkukm 71 267 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 268 22 22 CD work_cfbskzb7hzha5apjddr27rkukm 71 269 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 71 270 6.5 6.5 CD work_cfbskzb7hzha5apjddr27rkukm 71 271 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 71 272 a a DT work_cfbskzb7hzha5apjddr27rkukm 71 273 Types type NNS work_cfbskzb7hzha5apjddr27rkukm 71 274 of of IN work_cfbskzb7hzha5apjddr27rkukm 71 275 sequence sequence NN work_cfbskzb7hzha5apjddr27rkukm 71 276 of of IN work_cfbskzb7hzha5apjddr27rkukm 71 277 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 71 278 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 71 279 ; ; : work_cfbskzb7hzha5apjddr27rkukm 71 280 designations designation NNS work_cfbskzb7hzha5apjddr27rkukm 71 281 from from IN work_cfbskzb7hzha5apjddr27rkukm 71 282 Filliol Filliol NNP work_cfbskzb7hzha5apjddr27rkukm 71 283 et et FW work_cfbskzb7hzha5apjddr27rkukm 71 284 al al NNP work_cfbskzb7hzha5apjddr27rkukm 71 285 . . . work_cfbskzb7hzha5apjddr27rkukm 72 1 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 72 2 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 72 3 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 72 4 and and CC work_cfbskzb7hzha5apjddr27rkukm 72 5 Iwamoto Iwamoto NNP work_cfbskzb7hzha5apjddr27rkukm 72 6 et et NNP work_cfbskzb7hzha5apjddr27rkukm 72 7 al al NNP work_cfbskzb7hzha5apjddr27rkukm 72 8 . . . work_cfbskzb7hzha5apjddr27rkukm 73 1 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 73 2 14 14 CD work_cfbskzb7hzha5apjddr27rkukm 73 3 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 73 4 . . . work_cfbskzb7hzha5apjddr27rkukm 74 1 b b LS work_cfbskzb7hzha5apjddr27rkukm 74 2 Sensitive sensitive JJ work_cfbskzb7hzha5apjddr27rkukm 74 3 to to IN work_cfbskzb7hzha5apjddr27rkukm 74 4 any any DT work_cfbskzb7hzha5apjddr27rkukm 74 5 one one CD work_cfbskzb7hzha5apjddr27rkukm 74 6 of of IN work_cfbskzb7hzha5apjddr27rkukm 74 7 the the DT work_cfbskzb7hzha5apjddr27rkukm 74 8 four four CD work_cfbskzb7hzha5apjddr27rkukm 74 9 anti anti JJ work_cfbskzb7hzha5apjddr27rkukm 74 10 - - JJ work_cfbskzb7hzha5apjddr27rkukm 74 11 TB tb JJ work_cfbskzb7hzha5apjddr27rkukm 74 12 drugs drug NNS work_cfbskzb7hzha5apjddr27rkukm 74 13 . . . work_cfbskzb7hzha5apjddr27rkukm 75 1 c c LS work_cfbskzb7hzha5apjddr27rkukm 75 2 Resistant resistant JJ work_cfbskzb7hzha5apjddr27rkukm 75 3 to to IN work_cfbskzb7hzha5apjddr27rkukm 75 4 any any DT work_cfbskzb7hzha5apjddr27rkukm 75 5 one one CD work_cfbskzb7hzha5apjddr27rkukm 75 6 of of IN work_cfbskzb7hzha5apjddr27rkukm 75 7 the the DT work_cfbskzb7hzha5apjddr27rkukm 75 8 anti anti JJ work_cfbskzb7hzha5apjddr27rkukm 75 9 - - JJ work_cfbskzb7hzha5apjddr27rkukm 75 10 TB tb JJ work_cfbskzb7hzha5apjddr27rkukm 75 11 drugs drug NNS work_cfbskzb7hzha5apjddr27rkukm 75 12 . . . work_cfbskzb7hzha5apjddr27rkukm 76 1 d d LS work_cfbskzb7hzha5apjddr27rkukm 76 2 Resistant resistant JJ work_cfbskzb7hzha5apjddr27rkukm 76 3 to to IN work_cfbskzb7hzha5apjddr27rkukm 76 4 isoniazid isoniazid NN work_cfbskzb7hzha5apjddr27rkukm 76 5 and and CC work_cfbskzb7hzha5apjddr27rkukm 76 6 rifampicin rifampicin NNS work_cfbskzb7hzha5apjddr27rkukm 76 7 . . . work_cfbskzb7hzha5apjddr27rkukm 77 1 e e LS work_cfbskzb7hzha5apjddr27rkukm 77 2 New New NNP work_cfbskzb7hzha5apjddr27rkukm 77 3 sublineage sublineage NN work_cfbskzb7hzha5apjddr27rkukm 77 4 found find VBN work_cfbskzb7hzha5apjddr27rkukm 77 5 in in IN work_cfbskzb7hzha5apjddr27rkukm 77 6 this this DT work_cfbskzb7hzha5apjddr27rkukm 77 7 study study NN work_cfbskzb7hzha5apjddr27rkukm 77 8 . . . work_cfbskzb7hzha5apjddr27rkukm 78 1 TABLE TABLE NNP work_cfbskzb7hzha5apjddr27rkukm 78 2 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 78 3 . . . work_cfbskzb7hzha5apjddr27rkukm 79 1 Genotypic genotypic JJ work_cfbskzb7hzha5apjddr27rkukm 79 2 characteristics characteristic NNS work_cfbskzb7hzha5apjddr27rkukm 79 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 79 4 the the DT work_cfbskzb7hzha5apjddr27rkukm 79 5 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 79 6 lineage lineage NN work_cfbskzb7hzha5apjddr27rkukm 79 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 79 8 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 79 9 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 79 10 isolates isolate VBZ work_cfbskzb7hzha5apjddr27rkukm 79 11 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 79 12 sublineage sublineage NN work_cfbskzb7hzha5apjddr27rkukm 79 13 % % NN work_cfbskzb7hzha5apjddr27rkukm 79 14 % % NN work_cfbskzb7hzha5apjddr27rkukm 79 15 of of IN work_cfbskzb7hzha5apjddr27rkukm 79 16 N n NN work_cfbskzb7hzha5apjddr27rkukm 79 17 branch branch NN work_cfbskzb7hzha5apjddr27rkukm 79 18 a a DT work_cfbskzb7hzha5apjddr27rkukm 79 19 Point Point NNP work_cfbskzb7hzha5apjddr27rkukm 79 20 mutations mutation NNS work_cfbskzb7hzha5apjddr27rkukm 79 21 in in IN work_cfbskzb7hzha5apjddr27rkukm 79 22 indicated indicate VBN work_cfbskzb7hzha5apjddr27rkukm 79 23 putative putative JJ work_cfbskzb7hzha5apjddr27rkukm 79 24 repair repair NN work_cfbskzb7hzha5apjddr27rkukm 79 25 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 79 26 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 79 27 % % NN work_cfbskzb7hzha5apjddr27rkukm 79 28 % % NN work_cfbskzb7hzha5apjddr27rkukm 79 29 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 79 30 SNP SNP NNP work_cfbskzb7hzha5apjddr27rkukm 79 31 in in IN work_cfbskzb7hzha5apjddr27rkukm 79 32 fbpA fbpa CD work_cfbskzb7hzha5apjddr27rkukm 79 33 156 156 CD work_cfbskzb7hzha5apjddr27rkukm 79 34 and and CC work_cfbskzb7hzha5apjddr27rkukm 79 35 fbpB fbpB JJR work_cfbskzb7hzha5apjddr27rkukm 79 36 238 238 CD work_cfbskzb7hzha5apjddr27rkukm 79 37 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 79 38 % % NN work_cfbskzb7hzha5apjddr27rkukm 79 39 % % NN work_cfbskzb7hzha5apjddr27rkukm 79 40 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 79 41 No no UH work_cfbskzb7hzha5apjddr27rkukm 79 42 . . . work_cfbskzb7hzha5apjddr27rkukm 80 1 of of IN work_cfbskzb7hzha5apjddr27rkukm 80 2 cluster cluster NN work_cfbskzb7hzha5apjddr27rkukm 80 3 No no NN work_cfbskzb7hzha5apjddr27rkukm 80 4 . . . work_cfbskzb7hzha5apjddr27rkukm 81 1 of of IN work_cfbskzb7hzha5apjddr27rkukm 81 2 cases case NNS work_cfbskzb7hzha5apjddr27rkukm 81 3 in in IN work_cfbskzb7hzha5apjddr27rkukm 81 4 cluster cluster NN work_cfbskzb7hzha5apjddr27rkukm 81 5 No no NN work_cfbskzb7hzha5apjddr27rkukm 81 6 . . . work_cfbskzb7hzha5apjddr27rkukm 82 1 of of IN work_cfbskzb7hzha5apjddr27rkukm 82 2 VNTR VNTR NNP work_cfbskzb7hzha5apjddr27rkukm 82 3 patternMut2 patternMut2 NNP work_cfbskzb7hzha5apjddr27rkukm 82 4 Mut4 Mut4 NNP work_cfbskzb7hzha5apjddr27rkukm 82 5 Ogt12 Ogt12 NNP work_cfbskzb7hzha5apjddr27rkukm 82 6 Ogt37 Ogt37 NNP work_cfbskzb7hzha5apjddr27rkukm 82 7 fbpA fbpA , work_cfbskzb7hzha5apjddr27rkukm 82 8 156 156 CD work_cfbskzb7hzha5apjddr27rkukm 82 9 fbpB fbpb SYM work_cfbskzb7hzha5apjddr27rkukm 82 10 238 238 CD work_cfbskzb7hzha5apjddr27rkukm 82 11 ST11(4 st11(4 CD work_cfbskzb7hzha5apjddr27rkukm 82 12 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 82 13 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 82 14 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 15 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 16 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 17 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 18 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 19 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 20 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 21 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 22 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 82 23 ST26(27 st26(27 NN work_cfbskzb7hzha5apjddr27rkukm 82 24 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 82 25 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 82 26 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 27 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 28 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 29 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 30 30 30 CD work_cfbskzb7hzha5apjddr27rkukm 82 31 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 32 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 82 33 13 13 CD work_cfbskzb7hzha5apjddr27rkukm 82 34 19 19 CD work_cfbskzb7hzha5apjddr27rkukm 82 35 ST3(13 st3(13 NN work_cfbskzb7hzha5apjddr27rkukm 82 36 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 82 37 77 77 CD work_cfbskzb7hzha5apjddr27rkukm 82 38 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 39 15 15 CD work_cfbskzb7hzha5apjddr27rkukm 82 40 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 41 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 42 8 8 CD work_cfbskzb7hzha5apjddr27rkukm 82 43 78 78 CD work_cfbskzb7hzha5apjddr27rkukm 82 44 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 82 45 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 82 46 11 11 CD work_cfbskzb7hzha5apjddr27rkukm 82 47 STK(4 stk(4 NN work_cfbskzb7hzha5apjddr27rkukm 82 48 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 82 49 75 75 CD work_cfbskzb7hzha5apjddr27rkukm 82 50 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 51 25 25 CD work_cfbskzb7hzha5apjddr27rkukm 82 52 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 53 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 54 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 55 50 50 CD work_cfbskzb7hzha5apjddr27rkukm 82 56 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 57 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 58 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 82 59 ST19(50 st19(50 NN work_cfbskzb7hzha5apjddr27rkukm 82 60 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 82 61 71 71 CD work_cfbskzb7hzha5apjddr27rkukm 82 62 12 12 CD work_cfbskzb7hzha5apjddr27rkukm 82 63 98 98 CD work_cfbskzb7hzha5apjddr27rkukm 82 64 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 65 58 58 CD work_cfbskzb7hzha5apjddr27rkukm 82 66 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 67 98 98 CD work_cfbskzb7hzha5apjddr27rkukm 82 68 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 82 69 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 82 70 45 45 CD work_cfbskzb7hzha5apjddr27rkukm 82 71 ST25(7 st25(7 CD work_cfbskzb7hzha5apjddr27rkukm 82 72 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 82 73 57 57 CD work_cfbskzb7hzha5apjddr27rkukm 82 74 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 75 86 86 CD work_cfbskzb7hzha5apjddr27rkukm 82 76 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 77 43 43 CD work_cfbskzb7hzha5apjddr27rkukm 82 78 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 79 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 82 80 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 82 81 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 82 82 6 6 CD work_cfbskzb7hzha5apjddr27rkukm 82 83 ST22(49 ST22(49 NNS work_cfbskzb7hzha5apjddr27rkukm 82 84 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 82 85 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 82 86 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 82 87 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 82 88 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 82 89 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 82 90 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 82 91 98 98 CD work_cfbskzb7hzha5apjddr27rkukm 82 92 8 8 CD work_cfbskzb7hzha5apjddr27rkukm 82 93 32 32 CD work_cfbskzb7hzha5apjddr27rkukm 82 94 25 25 CD work_cfbskzb7hzha5apjddr27rkukm 82 95 ST10(180 st10(180 CD work_cfbskzb7hzha5apjddr27rkukm 82 96 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 82 97 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 82 98 99 99 CD work_cfbskzb7hzha5apjddr27rkukm 82 99 99 99 CD work_cfbskzb7hzha5apjddr27rkukm 82 100 99 99 CD work_cfbskzb7hzha5apjddr27rkukm 82 101 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 82 102 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 103 99 99 CD work_cfbskzb7hzha5apjddr27rkukm 82 104 25 25 CD work_cfbskzb7hzha5apjddr27rkukm 82 105 71 71 CD work_cfbskzb7hzha5apjddr27rkukm 82 106 134 134 CD work_cfbskzb7hzha5apjddr27rkukm 82 107 STN(4 stn(4 CD work_cfbskzb7hzha5apjddr27rkukm 82 108 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 82 109 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 110 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 82 111 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 82 112 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 82 113 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 114 0 0 CD work_cfbskzb7hzha5apjddr27rkukm 82 115 50 50 CD work_cfbskzb7hzha5apjddr27rkukm 82 116 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 82 117 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 82 118 3 3 CD work_cfbskzb7hzha5apjddr27rkukm 82 119 a a DT work_cfbskzb7hzha5apjddr27rkukm 82 120 Defined define VBN work_cfbskzb7hzha5apjddr27rkukm 82 121 by by IN work_cfbskzb7hzha5apjddr27rkukm 82 122 IS6110 is6110 NN work_cfbskzb7hzha5apjddr27rkukm 82 123 insertion insertion NN work_cfbskzb7hzha5apjddr27rkukm 82 124 in in IN work_cfbskzb7hzha5apjddr27rkukm 82 125 the the DT work_cfbskzb7hzha5apjddr27rkukm 82 126 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 82 127 region region NN work_cfbskzb7hzha5apjddr27rkukm 82 128 . . . work_cfbskzb7hzha5apjddr27rkukm 83 1 CMI CMI NNP work_cfbskzb7hzha5apjddr27rkukm 83 2 Chang Chang NNP work_cfbskzb7hzha5apjddr27rkukm 83 3 et et FW work_cfbskzb7hzha5apjddr27rkukm 83 4 al al NNP work_cfbskzb7hzha5apjddr27rkukm 83 5 . . . work_cfbskzb7hzha5apjddr27rkukm 84 1 Genotypic genotypic JJ work_cfbskzb7hzha5apjddr27rkukm 84 2 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 84 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 84 4 the the DT work_cfbskzb7hzha5apjddr27rkukm 84 5 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 84 6 lineage lineage NN work_cfbskzb7hzha5apjddr27rkukm 84 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 84 8 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 84 9 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 84 10 1393 1393 CD work_cfbskzb7hzha5apjddr27rkukm 84 11 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 84 12 The the DT work_cfbskzb7hzha5apjddr27rkukm 84 13 Authors Authors NNPS work_cfbskzb7hzha5apjddr27rkukm 84 14 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 84 15 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 84 16 and and CC work_cfbskzb7hzha5apjddr27rkukm 84 17 Infection Infection NNP work_cfbskzb7hzha5apjddr27rkukm 84 18 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 84 19 European European NNP work_cfbskzb7hzha5apjddr27rkukm 84 20 Society Society NNP work_cfbskzb7hzha5apjddr27rkukm 84 21 of of IN work_cfbskzb7hzha5apjddr27rkukm 84 22 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 84 23 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 84 24 and and CC work_cfbskzb7hzha5apjddr27rkukm 84 25 Infectious Infectious NNP work_cfbskzb7hzha5apjddr27rkukm 84 26 Diseases Diseases NNPS work_cfbskzb7hzha5apjddr27rkukm 84 27 , , , work_cfbskzb7hzha5apjddr27rkukm 84 28 CMI CMI NNP work_cfbskzb7hzha5apjddr27rkukm 84 29 , , , work_cfbskzb7hzha5apjddr27rkukm 84 30 17 17 CD work_cfbskzb7hzha5apjddr27rkukm 84 31 , , , work_cfbskzb7hzha5apjddr27rkukm 84 32 1391–1396 1391–1396 CD work_cfbskzb7hzha5apjddr27rkukm 84 33 resulted result VBD work_cfbskzb7hzha5apjddr27rkukm 84 34 in in IN work_cfbskzb7hzha5apjddr27rkukm 84 35 poor poor JJ work_cfbskzb7hzha5apjddr27rkukm 84 36 resolution resolution NN work_cfbskzb7hzha5apjddr27rkukm 84 37 of of IN work_cfbskzb7hzha5apjddr27rkukm 84 38 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 84 39 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 84 40 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 84 41 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 84 42 25 25 CD work_cfbskzb7hzha5apjddr27rkukm 84 43 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 84 44 . . . work_cfbskzb7hzha5apjddr27rkukm 85 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 85 2 ancient ancient JJ work_cfbskzb7hzha5apjddr27rkukm 85 3 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 85 4 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 85 5 ST11 ST11 NNP work_cfbskzb7hzha5apjddr27rkukm 85 6 and and CC work_cfbskzb7hzha5apjddr27rkukm 85 7 ST26 ST26 NNP work_cfbskzb7hzha5apjddr27rkukm 85 8 were be VBD work_cfbskzb7hzha5apjddr27rkukm 85 9 positioned position VBN work_cfbskzb7hzha5apjddr27rkukm 85 10 away away RB work_cfbskzb7hzha5apjddr27rkukm 85 11 from from IN work_cfbskzb7hzha5apjddr27rkukm 85 12 the the DT work_cfbskzb7hzha5apjddr27rkukm 85 13 major major JJ work_cfbskzb7hzha5apjddr27rkukm 85 14 MIRU MIRU NNP work_cfbskzb7hzha5apjddr27rkukm 85 15 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 85 16 VNTR vntr NN work_cfbskzb7hzha5apjddr27rkukm 85 17 genotypes genotype NNS work_cfbskzb7hzha5apjddr27rkukm 85 18 , , , work_cfbskzb7hzha5apjddr27rkukm 85 19 indicating indicate VBG work_cfbskzb7hzha5apjddr27rkukm 85 20 their -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 85 21 more more RBR work_cfbskzb7hzha5apjddr27rkukm 85 22 distant distant JJ work_cfbskzb7hzha5apjddr27rkukm 85 23 genetic genetic JJ work_cfbskzb7hzha5apjddr27rkukm 85 24 relationship relationship NN work_cfbskzb7hzha5apjddr27rkukm 85 25 to to IN work_cfbskzb7hzha5apjddr27rkukm 85 26 the the DT work_cfbskzb7hzha5apjddr27rkukm 85 27 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 85 28 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 85 29 . . . work_cfbskzb7hzha5apjddr27rkukm 86 1 To to TO work_cfbskzb7hzha5apjddr27rkukm 86 2 validate validate VB work_cfbskzb7hzha5apjddr27rkukm 86 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 86 4 phylogenetic phylogenetic JJ work_cfbskzb7hzha5apjddr27rkukm 86 5 reconstruction reconstruction NN work_cfbskzb7hzha5apjddr27rkukm 86 6 by by IN work_cfbskzb7hzha5apjddr27rkukm 86 7 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 86 8 typing type VBG work_cfbskzb7hzha5apjddr27rkukm 86 9 , , , work_cfbskzb7hzha5apjddr27rkukm 86 10 we -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 86 11 analysed analyse VBD work_cfbskzb7hzha5apjddr27rkukm 86 12 STs st NNS work_cfbskzb7hzha5apjddr27rkukm 86 13 of of IN work_cfbskzb7hzha5apjddr27rkukm 86 14 our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 86 15 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 86 16 using use VBG work_cfbskzb7hzha5apjddr27rkukm 86 17 ten ten CD work_cfbskzb7hzha5apjddr27rkukm 86 18 SNPs snp NNS work_cfbskzb7hzha5apjddr27rkukm 86 19 , , , work_cfbskzb7hzha5apjddr27rkukm 86 20 as as IN work_cfbskzb7hzha5apjddr27rkukm 86 21 previously previously RB work_cfbskzb7hzha5apjddr27rkukm 86 22 described describe VBN work_cfbskzb7hzha5apjddr27rkukm 86 23 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 86 24 11,14 11,14 CD work_cfbskzb7hzha5apjddr27rkukm 86 25 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 86 26 . . . work_cfbskzb7hzha5apjddr27rkukm 87 1 Nine nine CD work_cfbskzb7hzha5apjddr27rkukm 87 2 STs st NNS work_cfbskzb7hzha5apjddr27rkukm 87 3 were be VBD work_cfbskzb7hzha5apjddr27rkukm 87 4 identified identify VBN work_cfbskzb7hzha5apjddr27rkukm 87 5 in in IN work_cfbskzb7hzha5apjddr27rkukm 87 6 our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 87 7 popula- popula- NN work_cfbskzb7hzha5apjddr27rkukm 87 8 tion tion NN work_cfbskzb7hzha5apjddr27rkukm 87 9 . . . work_cfbskzb7hzha5apjddr27rkukm 88 1 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 88 2 group group NN work_cfbskzb7hzha5apjddr27rkukm 88 3 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 88 4 sublineage sublineage NN work_cfbskzb7hzha5apjddr27rkukm 88 5 : : : work_cfbskzb7hzha5apjddr27rkukm 88 6 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 88 7 isolate isolate NN work_cfbskzb7hzha5apjddr27rkukm 88 8 of of IN work_cfbskzb7hzha5apjddr27rkukm 88 9 ST11 ST11 NNP work_cfbskzb7hzha5apjddr27rkukm 88 10 ; ; : work_cfbskzb7hzha5apjddr27rkukm 88 11 this this DT work_cfbskzb7hzha5apjddr27rkukm 88 12 isolate isolate NN work_cfbskzb7hzha5apjddr27rkukm 88 13 shows show VBZ work_cfbskzb7hzha5apjddr27rkukm 88 14 a a DT work_cfbskzb7hzha5apjddr27rkukm 88 15 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 88 16 of of IN work_cfbskzb7hzha5apjddr27rkukm 88 17 the the DT work_cfbskzb7hzha5apjddr27rkukm 88 18 RD105 RD105 NNP work_cfbskzb7hzha5apjddr27rkukm 88 19 region region NN work_cfbskzb7hzha5apjddr27rkukm 88 20 . . . work_cfbskzb7hzha5apjddr27rkukm 89 1 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 89 2 group group NN work_cfbskzb7hzha5apjddr27rkukm 89 3 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 89 4 sublin- sublin- NN work_cfbskzb7hzha5apjddr27rkukm 89 5 eages eage NNS work_cfbskzb7hzha5apjddr27rkukm 89 6 : : : work_cfbskzb7hzha5apjddr27rkukm 89 7 30 30 CD work_cfbskzb7hzha5apjddr27rkukm 89 8 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 89 9 of of IN work_cfbskzb7hzha5apjddr27rkukm 89 10 ST11 ST11 NNP work_cfbskzb7hzha5apjddr27rkukm 89 11 and and CC work_cfbskzb7hzha5apjddr27rkukm 89 12 ST26 ST26 NNP work_cfbskzb7hzha5apjddr27rkukm 89 13 ; ; : work_cfbskzb7hzha5apjddr27rkukm 89 14 these these DT work_cfbskzb7hzha5apjddr27rkukm 89 15 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 89 16 show show VBP work_cfbskzb7hzha5apjddr27rkukm 89 17 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 89 18 of of IN work_cfbskzb7hzha5apjddr27rkukm 89 19 the the DT work_cfbskzb7hzha5apjddr27rkukm 89 20 RD105 RD105 NNP work_cfbskzb7hzha5apjddr27rkukm 89 21 and and CC work_cfbskzb7hzha5apjddr27rkukm 89 22 RD207 RD207 NNP work_cfbskzb7hzha5apjddr27rkukm 89 23 regions region NNS work_cfbskzb7hzha5apjddr27rkukm 89 24 . . . work_cfbskzb7hzha5apjddr27rkukm 90 1 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 90 2 group group NN work_cfbskzb7hzha5apjddr27rkukm 90 3 3 3 CD work_cfbskzb7hzha5apjddr27rkukm 90 4 sub- sub- JJ work_cfbskzb7hzha5apjddr27rkukm 90 5 lineages lineage NNS work_cfbskzb7hzha5apjddr27rkukm 90 6 : : : work_cfbskzb7hzha5apjddr27rkukm 90 7 225 225 CD work_cfbskzb7hzha5apjddr27rkukm 90 8 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 90 9 of of IN work_cfbskzb7hzha5apjddr27rkukm 90 10 ST3 ST3 NNP work_cfbskzb7hzha5apjddr27rkukm 90 11 , , , work_cfbskzb7hzha5apjddr27rkukm 90 12 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 90 13 , , , work_cfbskzb7hzha5apjddr27rkukm 90 14 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 90 15 , , , work_cfbskzb7hzha5apjddr27rkukm 90 16 ST22 ST22 NNP work_cfbskzb7hzha5apjddr27rkukm 90 17 , , , work_cfbskzb7hzha5apjddr27rkukm 90 18 STK STK NNP work_cfbskzb7hzha5apjddr27rkukm 90 19 and and CC work_cfbskzb7hzha5apjddr27rkukm 90 20 STN STN NNP work_cfbskzb7hzha5apjddr27rkukm 90 21 ; ; : work_cfbskzb7hzha5apjddr27rkukm 90 22 these these DT work_cfbskzb7hzha5apjddr27rkukm 90 23 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 90 24 show show VBP work_cfbskzb7hzha5apjddr27rkukm 90 25 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 90 26 of of IN work_cfbskzb7hzha5apjddr27rkukm 90 27 the the DT work_cfbskzb7hzha5apjddr27rkukm 90 28 RD105 RD105 NNP work_cfbskzb7hzha5apjddr27rkukm 90 29 , , , work_cfbskzb7hzha5apjddr27rkukm 90 30 RD207 rd207 NN work_cfbskzb7hzha5apjddr27rkukm 90 31 and and CC work_cfbskzb7hzha5apjddr27rkukm 90 32 RD181 rd181 JJ work_cfbskzb7hzha5apjddr27rkukm 90 33 regions region NNS work_cfbskzb7hzha5apjddr27rkukm 90 34 . . . work_cfbskzb7hzha5apjddr27rkukm 91 1 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 91 2 group group NN work_cfbskzb7hzha5apjddr27rkukm 91 3 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 91 4 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 91 5 : : : work_cfbskzb7hzha5apjddr27rkukm 91 6 43 43 CD work_cfbskzb7hzha5apjddr27rkukm 91 7 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 91 8 of of IN work_cfbskzb7hzha5apjddr27rkukm 91 9 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 91 10 and and CC work_cfbskzb7hzha5apjddr27rkukm 91 11 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 91 12 ; ; : work_cfbskzb7hzha5apjddr27rkukm 91 13 these these DT work_cfbskzb7hzha5apjddr27rkukm 91 14 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 91 15 show show VBP work_cfbskzb7hzha5apjddr27rkukm 91 16 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 91 17 of of IN work_cfbskzb7hzha5apjddr27rkukm 91 18 the the DT work_cfbskzb7hzha5apjddr27rkukm 91 19 RD105 RD105 NNP work_cfbskzb7hzha5apjddr27rkukm 91 20 , , , work_cfbskzb7hzha5apjddr27rkukm 91 21 RD207 RD207 NNP work_cfbskzb7hzha5apjddr27rkukm 91 22 , , , work_cfbskzb7hzha5apjddr27rkukm 91 23 RD181 RD181 NNP work_cfbskzb7hzha5apjddr27rkukm 91 24 and and CC work_cfbskzb7hzha5apjddr27rkukm 91 25 RD150 rd150 NN work_cfbskzb7hzha5apjddr27rkukm 91 26 regions region NNS work_cfbskzb7hzha5apjddr27rkukm 91 27 . . . work_cfbskzb7hzha5apjddr27rkukm 92 1 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 92 2 group group NN work_cfbskzb7hzha5apjddr27rkukm 92 3 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 92 4 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 92 5 : : : work_cfbskzb7hzha5apjddr27rkukm 92 6 32 32 CD work_cfbskzb7hzha5apjddr27rkukm 92 7 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 92 8 of of IN work_cfbskzb7hzha5apjddr27rkukm 92 9 ST3 ST3 NNP work_cfbskzb7hzha5apjddr27rkukm 92 10 , , , work_cfbskzb7hzha5apjddr27rkukm 92 11 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 92 12 , , , work_cfbskzb7hzha5apjddr27rkukm 92 13 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 92 14 , , , work_cfbskzb7hzha5apjddr27rkukm 92 15 ST22 ST22 NNP work_cfbskzb7hzha5apjddr27rkukm 92 16 and and CC work_cfbskzb7hzha5apjddr27rkukm 92 17 STK STK NNP work_cfbskzb7hzha5apjddr27rkukm 92 18 ; ; , work_cfbskzb7hzha5apjddr27rkukm 92 19 these these DT work_cfbskzb7hzha5apjddr27rkukm 92 20 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 92 21 show show VBP work_cfbskzb7hzha5apjddr27rkukm 92 22 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 92 23 of of IN work_cfbskzb7hzha5apjddr27rkukm 92 24 the the DT work_cfbskzb7hzha5apjddr27rkukm 92 25 RD105 RD105 NNP work_cfbskzb7hzha5apjddr27rkukm 92 26 , , , work_cfbskzb7hzha5apjddr27rkukm 92 27 RD207 RD207 NNP work_cfbskzb7hzha5apjddr27rkukm 92 28 , , , work_cfbskzb7hzha5apjddr27rkukm 92 29 RD181 rd181 NN work_cfbskzb7hzha5apjddr27rkukm 92 30 and and CC work_cfbskzb7hzha5apjddr27rkukm 92 31 RD142 RD142 NNP work_cfbskzb7hzha5apjddr27rkukm 92 32 regions region NNS work_cfbskzb7hzha5apjddr27rkukm 92 33 . . . work_cfbskzb7hzha5apjddr27rkukm 93 1 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 93 2 group group NN work_cfbskzb7hzha5apjddr27rkukm 93 3 6 6 CD work_cfbskzb7hzha5apjddr27rkukm 93 4 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 93 5 : : : work_cfbskzb7hzha5apjddr27rkukm 93 6 seven seven CD work_cfbskzb7hzha5apjddr27rkukm 93 7 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 93 8 of of IN work_cfbskzb7hzha5apjddr27rkukm 93 9 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 93 10 and and CC work_cfbskzb7hzha5apjddr27rkukm 93 11 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 93 12 ; ; : work_cfbskzb7hzha5apjddr27rkukm 93 13 these these DT work_cfbskzb7hzha5apjddr27rkukm 93 14 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 93 15 show show VBP work_cfbskzb7hzha5apjddr27rkukm 93 16 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 93 17 of of IN work_cfbskzb7hzha5apjddr27rkukm 93 18 the the DT work_cfbskzb7hzha5apjddr27rkukm 93 19 RD105 RD105 NNP work_cfbskzb7hzha5apjddr27rkukm 93 20 , , , work_cfbskzb7hzha5apjddr27rkukm 93 21 RD207 RD207 NNP work_cfbskzb7hzha5apjddr27rkukm 93 22 , , , work_cfbskzb7hzha5apjddr27rkukm 93 23 RD181 RD181 NNP work_cfbskzb7hzha5apjddr27rkukm 93 24 , , , work_cfbskzb7hzha5apjddr27rkukm 93 25 RD142 RD142 NNP work_cfbskzb7hzha5apjddr27rkukm 93 26 and and CC work_cfbskzb7hzha5apjddr27rkukm 93 27 RD150 RD150 NNP work_cfbskzb7hzha5apjddr27rkukm 93 28 regions region NNS work_cfbskzb7hzha5apjddr27rkukm 93 29 . . . work_cfbskzb7hzha5apjddr27rkukm 94 1 Strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 94 2 in in IN work_cfbskzb7hzha5apjddr27rkukm 94 3 groups group NNS work_cfbskzb7hzha5apjddr27rkukm 94 4 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 94 5 and and CC work_cfbskzb7hzha5apjddr27rkukm 94 6 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 94 7 have have VBP work_cfbskzb7hzha5apjddr27rkukm 94 8 neither neither CC work_cfbskzb7hzha5apjddr27rkukm 94 9 a a DT work_cfbskzb7hzha5apjddr27rkukm 94 10 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 94 11 of of IN work_cfbskzb7hzha5apjddr27rkukm 94 12 RD181 rd181 NN work_cfbskzb7hzha5apjddr27rkukm 94 13 nor nor CC work_cfbskzb7hzha5apjddr27rkukm 94 14 an an DT work_cfbskzb7hzha5apjddr27rkukm 94 15 insertion insertion NN work_cfbskzb7hzha5apjddr27rkukm 94 16 of of IN work_cfbskzb7hzha5apjddr27rkukm 94 17 IS6110 is6110 NN work_cfbskzb7hzha5apjddr27rkukm 94 18 in in IN work_cfbskzb7hzha5apjddr27rkukm 94 19 the the DT work_cfbskzb7hzha5apjddr27rkukm 94 20 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 94 21 region region NN work_cfbskzb7hzha5apjddr27rkukm 94 22 , , , work_cfbskzb7hzha5apjddr27rkukm 94 23 and and CC work_cfbskzb7hzha5apjddr27rkukm 94 24 can can MD work_cfbskzb7hzha5apjddr27rkukm 94 25 be be VB work_cfbskzb7hzha5apjddr27rkukm 94 26 thought think VBN work_cfbskzb7hzha5apjddr27rkukm 94 27 of of IN work_cfbskzb7hzha5apjddr27rkukm 94 28 as as IN work_cfbskzb7hzha5apjddr27rkukm 94 29 being be VBG work_cfbskzb7hzha5apjddr27rkukm 94 30 ancestral ancestral JJ work_cfbskzb7hzha5apjddr27rkukm 94 31 to to IN work_cfbskzb7hzha5apjddr27rkukm 94 32 the the DT work_cfbskzb7hzha5apjddr27rkukm 94 33 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 94 34 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 94 35 lineage lineage NN work_cfbskzb7hzha5apjddr27rkukm 94 36 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 94 37 Fig fig NN work_cfbskzb7hzha5apjddr27rkukm 94 38 . . . work_cfbskzb7hzha5apjddr27rkukm 95 1 2 2 LS work_cfbskzb7hzha5apjddr27rkukm 95 2 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 95 3 . . . work_cfbskzb7hzha5apjddr27rkukm 96 1 Discussion discussion NN work_cfbskzb7hzha5apjddr27rkukm 96 2 The the DT work_cfbskzb7hzha5apjddr27rkukm 96 3 reasons reason NNS work_cfbskzb7hzha5apjddr27rkukm 96 4 for for IN work_cfbskzb7hzha5apjddr27rkukm 96 5 the the DT work_cfbskzb7hzha5apjddr27rkukm 96 6 apparent apparent JJ work_cfbskzb7hzha5apjddr27rkukm 96 7 global global JJ work_cfbskzb7hzha5apjddr27rkukm 96 8 success success NN work_cfbskzb7hzha5apjddr27rkukm 96 9 of of IN work_cfbskzb7hzha5apjddr27rkukm 96 10 the the DT work_cfbskzb7hzha5apjddr27rkukm 96 11 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 96 12 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 96 13 are be VBP work_cfbskzb7hzha5apjddr27rkukm 96 14 not not RB work_cfbskzb7hzha5apjddr27rkukm 96 15 yet yet RB work_cfbskzb7hzha5apjddr27rkukm 96 16 understood understand VBN work_cfbskzb7hzha5apjddr27rkukm 96 17 , , , work_cfbskzb7hzha5apjddr27rkukm 96 18 but but CC work_cfbskzb7hzha5apjddr27rkukm 96 19 could could MD work_cfbskzb7hzha5apjddr27rkukm 96 20 include include VB work_cfbskzb7hzha5apjddr27rkukm 96 21 a a DT work_cfbskzb7hzha5apjddr27rkukm 96 22 variety variety NN work_cfbskzb7hzha5apjddr27rkukm 96 23 of of IN work_cfbskzb7hzha5apjddr27rkukm 96 24 host host NN work_cfbskzb7hzha5apjddr27rkukm 96 25 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 96 26 related relate VBN work_cfbskzb7hzha5apjddr27rkukm 96 27 factors factor NNS work_cfbskzb7hzha5apjddr27rkukm 96 28 , , , work_cfbskzb7hzha5apjddr27rkukm 96 29 such such JJ work_cfbskzb7hzha5apjddr27rkukm 96 30 as as IN work_cfbskzb7hzha5apjddr27rkukm 96 31 human human JJ work_cfbskzb7hzha5apjddr27rkukm 96 32 population population NN work_cfbskzb7hzha5apjddr27rkukm 96 33 movements movement NNS work_cfbskzb7hzha5apjddr27rkukm 96 34 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 96 35 9 9 CD work_cfbskzb7hzha5apjddr27rkukm 96 36 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 96 37 , , , work_cfbskzb7hzha5apjddr27rkukm 96 38 selective selective JJ work_cfbskzb7hzha5apjddr27rkukm 96 39 pressure pressure NN work_cfbskzb7hzha5apjddr27rkukm 96 40 due due IN work_cfbskzb7hzha5apjddr27rkukm 96 41 to to IN work_cfbskzb7hzha5apjddr27rkukm 96 42 increases increase NNS work_cfbskzb7hzha5apjddr27rkukm 96 43 in in IN work_cfbskzb7hzha5apjddr27rkukm 96 44 worldwide worldwide JJ work_cfbskzb7hzha5apjddr27rkukm 96 45 BCG BCG NNP work_cfbskzb7hzha5apjddr27rkukm 96 46 vaccine vaccine NN work_cfbskzb7hzha5apjddr27rkukm 96 47 coverage coverage NN work_cfbskzb7hzha5apjddr27rkukm 96 48 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 96 49 12 12 CD work_cfbskzb7hzha5apjddr27rkukm 96 50 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 96 51 , , , work_cfbskzb7hzha5apjddr27rkukm 96 52 and and CC work_cfbskzb7hzha5apjddr27rkukm 96 53 ineffective ineffective JJ work_cfbskzb7hzha5apjddr27rkukm 96 54 treatment treatment NN work_cfbskzb7hzha5apjddr27rkukm 96 55 of of IN work_cfbskzb7hzha5apjddr27rkukm 96 56 drug- drug- JJ work_cfbskzb7hzha5apjddr27rkukm 96 57 resistant resistant JJ work_cfbskzb7hzha5apjddr27rkukm 96 58 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 96 59 , , , work_cfbskzb7hzha5apjddr27rkukm 96 60 leading lead VBG work_cfbskzb7hzha5apjddr27rkukm 96 61 to to IN work_cfbskzb7hzha5apjddr27rkukm 96 62 increased increase VBN work_cfbskzb7hzha5apjddr27rkukm 96 63 transmission transmission NN work_cfbskzb7hzha5apjddr27rkukm 96 64 periods period NNS work_cfbskzb7hzha5apjddr27rkukm 96 65 . . . work_cfbskzb7hzha5apjddr27rkukm 97 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 97 2 high high JJ work_cfbskzb7hzha5apjddr27rkukm 97 3 adaptability adaptability NN work_cfbskzb7hzha5apjddr27rkukm 97 4 of of IN work_cfbskzb7hzha5apjddr27rkukm 97 5 these these DT work_cfbskzb7hzha5apjddr27rkukm 97 6 bacteria bacteria NNS work_cfbskzb7hzha5apjddr27rkukm 97 7 to to TO work_cfbskzb7hzha5apjddr27rkukm 97 8 stress stress VB work_cfbskzb7hzha5apjddr27rkukm 97 9 conditions condition NNS work_cfbskzb7hzha5apjddr27rkukm 97 10 , , , work_cfbskzb7hzha5apjddr27rkukm 97 11 such such JJ work_cfbskzb7hzha5apjddr27rkukm 97 12 as as IN work_cfbskzb7hzha5apjddr27rkukm 97 13 the the DT work_cfbskzb7hzha5apjddr27rkukm 97 14 host host NN work_cfbskzb7hzha5apjddr27rkukm 97 15 ’s ’s POS work_cfbskzb7hzha5apjddr27rkukm 97 16 immune immune JJ work_cfbskzb7hzha5apjddr27rkukm 97 17 response response NN work_cfbskzb7hzha5apjddr27rkukm 97 18 and/or and/or CC work_cfbskzb7hzha5apjddr27rkukm 97 19 exposure exposure NN work_cfbskzb7hzha5apjddr27rkukm 97 20 to to IN work_cfbskzb7hzha5apjddr27rkukm 97 21 anti anti JJ work_cfbskzb7hzha5apjddr27rkukm 97 22 - - JJ work_cfbskzb7hzha5apjddr27rkukm 97 23 tuberculosis tuberculosis JJ work_cfbskzb7hzha5apjddr27rkukm 97 24 drugs drug NNS work_cfbskzb7hzha5apjddr27rkukm 97 25 , , , work_cfbskzb7hzha5apjddr27rkukm 97 26 has have VBZ work_cfbskzb7hzha5apjddr27rkukm 97 27 been be VBN work_cfbskzb7hzha5apjddr27rkukm 97 28 hypothetically hypothetically RB work_cfbskzb7hzha5apjddr27rkukm 97 29 attributed attribute VBN work_cfbskzb7hzha5apjddr27rkukm 97 30 to to IN work_cfbskzb7hzha5apjddr27rkukm 97 31 defects defect NNS work_cfbskzb7hzha5apjddr27rkukm 97 32 in in IN work_cfbskzb7hzha5apjddr27rkukm 97 33 DNA dna NN work_cfbskzb7hzha5apjddr27rkukm 97 34 repair repair NN work_cfbskzb7hzha5apjddr27rkukm 97 35 systems system NNS work_cfbskzb7hzha5apjddr27rkukm 97 36 , , , work_cfbskzb7hzha5apjddr27rkukm 97 37 which which WDT work_cfbskzb7hzha5apjddr27rkukm 97 38 would would MD work_cfbskzb7hzha5apjddr27rkukm 97 39 confer confer VB work_cfbskzb7hzha5apjddr27rkukm 97 40 selective selective JJ work_cfbskzb7hzha5apjddr27rkukm 97 41 advantages advantage NNS work_cfbskzb7hzha5apjddr27rkukm 97 42 due due JJ work_cfbskzb7hzha5apjddr27rkukm 97 43 to to IN work_cfbskzb7hzha5apjddr27rkukm 97 44 an an DT work_cfbskzb7hzha5apjddr27rkukm 97 45 increased increase VBN work_cfbskzb7hzha5apjddr27rkukm 97 46 mutation mutation NN work_cfbskzb7hzha5apjddr27rkukm 97 47 rate rate NN work_cfbskzb7hzha5apjddr27rkukm 97 48 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 97 49 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 97 50 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 97 51 . . . work_cfbskzb7hzha5apjddr27rkukm 98 1 A a DT work_cfbskzb7hzha5apjddr27rkukm 98 2 num- num- JJ work_cfbskzb7hzha5apjddr27rkukm 98 3 ber ber NN work_cfbskzb7hzha5apjddr27rkukm 98 4 of of IN work_cfbskzb7hzha5apjddr27rkukm 98 5 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 98 6 coding code VBG work_cfbskzb7hzha5apjddr27rkukm 98 7 for for IN work_cfbskzb7hzha5apjddr27rkukm 98 8 presumptive presumptive JJ work_cfbskzb7hzha5apjddr27rkukm 98 9 DNA dna NN work_cfbskzb7hzha5apjddr27rkukm 98 10 repair repair NN work_cfbskzb7hzha5apjddr27rkukm 98 11 enzymes enzyme NNS work_cfbskzb7hzha5apjddr27rkukm 98 12 , , , work_cfbskzb7hzha5apjddr27rkukm 98 13 such such JJ work_cfbskzb7hzha5apjddr27rkukm 98 14 as as IN work_cfbskzb7hzha5apjddr27rkukm 98 15 ogt ogt NN work_cfbskzb7hzha5apjddr27rkukm 98 16 , , , work_cfbskzb7hzha5apjddr27rkukm 98 17 mutM mutM NNP work_cfbskzb7hzha5apjddr27rkukm 98 18 , , , work_cfbskzb7hzha5apjddr27rkukm 98 19 mutT mutt CD work_cfbskzb7hzha5apjddr27rkukm 98 20 and and CC work_cfbskzb7hzha5apjddr27rkukm 98 21 mutY mutY NNP work_cfbskzb7hzha5apjddr27rkukm 98 22 , , , work_cfbskzb7hzha5apjddr27rkukm 98 23 have have VBP work_cfbskzb7hzha5apjddr27rkukm 98 24 been be VBN work_cfbskzb7hzha5apjddr27rkukm 98 25 detected detect VBN work_cfbskzb7hzha5apjddr27rkukm 98 26 in in IN work_cfbskzb7hzha5apjddr27rkukm 98 27 the the DT work_cfbskzb7hzha5apjddr27rkukm 98 28 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 98 29 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 98 30 genome genome JJ work_cfbskzb7hzha5apjddr27rkukm 98 31 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 98 32 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 98 33 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 98 34 , , , work_cfbskzb7hzha5apjddr27rkukm 98 35 and and CC work_cfbskzb7hzha5apjddr27rkukm 98 36 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 98 37 of of IN work_cfbskzb7hzha5apjddr27rkukm 98 38 strains strains NNP work_cfbskzb7hzha5apjddr27rkukm 98 39 represent- represent- NNP work_cfbskzb7hzha5apjddr27rkukm 98 40 ing e VBG work_cfbskzb7hzha5apjddr27rkukm 98 41 different different JJ work_cfbskzb7hzha5apjddr27rkukm 98 42 branches branch NNS work_cfbskzb7hzha5apjddr27rkukm 98 43 of of IN work_cfbskzb7hzha5apjddr27rkukm 98 44 the the DT work_cfbskzb7hzha5apjddr27rkukm 98 45 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 98 46 genotype genotype NN work_cfbskzb7hzha5apjddr27rkukm 98 47 has have VBZ work_cfbskzb7hzha5apjddr27rkukm 98 48 shown show VBN work_cfbskzb7hzha5apjddr27rkukm 98 49 that that IN work_cfbskzb7hzha5apjddr27rkukm 98 50 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 98 51 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 98 52 display display VBP work_cfbskzb7hzha5apjddr27rkukm 98 53 unique unique JJ work_cfbskzb7hzha5apjddr27rkukm 98 54 missense missense NN work_cfbskzb7hzha5apjddr27rkukm 98 55 alterations alteration NNS work_cfbskzb7hzha5apjddr27rkukm 98 56 in in IN work_cfbskzb7hzha5apjddr27rkukm 98 57 putative putative JJ work_cfbskzb7hzha5apjddr27rkukm 98 58 mut mut NN work_cfbskzb7hzha5apjddr27rkukm 98 59 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 98 60 , , , work_cfbskzb7hzha5apjddr27rkukm 98 61 designated designate VBN work_cfbskzb7hzha5apjddr27rkukm 98 62 ogt ogt NN work_cfbskzb7hzha5apjddr27rkukm 98 63 , , , work_cfbskzb7hzha5apjddr27rkukm 98 64 mutT2 mutt2 ADD work_cfbskzb7hzha5apjddr27rkukm 98 65 and and CC work_cfbskzb7hzha5apjddr27rkukm 98 66 mutT4 mutt4 ADD work_cfbskzb7hzha5apjddr27rkukm 98 67 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 98 68 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 98 69 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 98 70 . . . work_cfbskzb7hzha5apjddr27rkukm 99 1 Although although IN work_cfbskzb7hzha5apjddr27rkukm 99 2 it -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 99 3 FIG FIG NNP work_cfbskzb7hzha5apjddr27rkukm 99 4 . . . work_cfbskzb7hzha5apjddr27rkukm 100 1 1 1 LS work_cfbskzb7hzha5apjddr27rkukm 100 2 . . . work_cfbskzb7hzha5apjddr27rkukm 101 1 A a DT work_cfbskzb7hzha5apjddr27rkukm 101 2 minimum minimum JJ work_cfbskzb7hzha5apjddr27rkukm 101 3 spanning span VBG work_cfbskzb7hzha5apjddr27rkukm 101 4 tree tree NN work_cfbskzb7hzha5apjddr27rkukm 101 5 based base VBN work_cfbskzb7hzha5apjddr27rkukm 101 6 on on IN work_cfbskzb7hzha5apjddr27rkukm 101 7 24-MIRU 24-miru CD work_cfbskzb7hzha5apjddr27rkukm 101 8 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 101 9 VNTR vntr NN work_cfbskzb7hzha5apjddr27rkukm 101 10 genotyping genotyping NN work_cfbskzb7hzha5apjddr27rkukm 101 11 of of IN work_cfbskzb7hzha5apjddr27rkukm 101 12 338 338 CD work_cfbskzb7hzha5apjddr27rkukm 101 13 Mycobacte- Mycobacte- NNP work_cfbskzb7hzha5apjddr27rkukm 101 14 rium rium NN work_cfbskzb7hzha5apjddr27rkukm 101 15 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 101 16 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 101 17 isolates isolate VBZ work_cfbskzb7hzha5apjddr27rkukm 101 18 . . . work_cfbskzb7hzha5apjddr27rkukm 102 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 102 2 circles circle NNS work_cfbskzb7hzha5apjddr27rkukm 102 3 represent represent VBP work_cfbskzb7hzha5apjddr27rkukm 102 4 different different JJ work_cfbskzb7hzha5apjddr27rkukm 102 5 types type NNS work_cfbskzb7hzha5apjddr27rkukm 102 6 classified classify VBN work_cfbskzb7hzha5apjddr27rkukm 102 7 by by IN work_cfbskzb7hzha5apjddr27rkukm 102 8 24- 24- NNP work_cfbskzb7hzha5apjddr27rkukm 102 9 MIRU MIRU NNP work_cfbskzb7hzha5apjddr27rkukm 102 10 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 102 11 VNTR vntr NN work_cfbskzb7hzha5apjddr27rkukm 102 12 genotypes genotype NNS work_cfbskzb7hzha5apjddr27rkukm 102 13 and and CC work_cfbskzb7hzha5apjddr27rkukm 102 14 were be VBD work_cfbskzb7hzha5apjddr27rkukm 102 15 coloured colour VBN work_cfbskzb7hzha5apjddr27rkukm 102 16 according accord VBG work_cfbskzb7hzha5apjddr27rkukm 102 17 to to IN work_cfbskzb7hzha5apjddr27rkukm 102 18 the the DT work_cfbskzb7hzha5apjddr27rkukm 102 19 ST ST NNP work_cfbskzb7hzha5apjddr27rkukm 102 20 classification classification NN work_cfbskzb7hzha5apjddr27rkukm 102 21 described describe VBN work_cfbskzb7hzha5apjddr27rkukm 102 22 in in IN work_cfbskzb7hzha5apjddr27rkukm 102 23 the the DT work_cfbskzb7hzha5apjddr27rkukm 102 24 text text NN work_cfbskzb7hzha5apjddr27rkukm 102 25 . . . work_cfbskzb7hzha5apjddr27rkukm 103 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 103 2 sizes size NNS work_cfbskzb7hzha5apjddr27rkukm 103 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 103 4 circles circle NNS work_cfbskzb7hzha5apjddr27rkukm 103 5 represent represent VBP work_cfbskzb7hzha5apjddr27rkukm 103 6 the the DT work_cfbskzb7hzha5apjddr27rkukm 103 7 number number NN work_cfbskzb7hzha5apjddr27rkukm 103 8 of of IN work_cfbskzb7hzha5apjddr27rkukm 103 9 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 103 10 with with IN work_cfbskzb7hzha5apjddr27rkukm 103 11 a a DT work_cfbskzb7hzha5apjddr27rkukm 103 12 particular particular JJ work_cfbskzb7hzha5apjddr27rkukm 103 13 genotype genotype NN work_cfbskzb7hzha5apjddr27rkukm 103 14 . . . work_cfbskzb7hzha5apjddr27rkukm 104 1 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 104 2 type type NN work_cfbskzb7hzha5apjddr27rkukm 104 3 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 104 4 No no UH work_cfbskzb7hzha5apjddr27rkukm 104 5 . . . work_cfbskzb7hzha5apjddr27rkukm 104 6 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 1 N n CD work_cfbskzb7hzha5apjddr27rkukm 105 2 branch branch NN work_cfbskzb7hzha5apjddr27rkukm 105 3 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 4 % % NN work_cfbskzb7hzha5apjddr27rkukm 105 5 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 6 ST ST NNP work_cfbskzb7hzha5apjddr27rkukm 105 7 105 105 CD work_cfbskzb7hzha5apjddr27rkukm 105 8 207 207 CD work_cfbskzb7hzha5apjddr27rkukm 105 9 181 181 CD work_cfbskzb7hzha5apjddr27rkukm 105 10 150 150 CD work_cfbskzb7hzha5apjddr27rkukm 105 11 142 142 CD work_cfbskzb7hzha5apjddr27rkukm 105 12 150 150 CD work_cfbskzb7hzha5apjddr27rkukm 105 13 142 142 CD work_cfbskzb7hzha5apjddr27rkukm 105 14 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 105 15 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 16 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 105 17 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 18 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 105 19 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 20 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 105 21 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 22 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 105 23 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 24 30 30 CD work_cfbskzb7hzha5apjddr27rkukm 105 25 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 26 30 30 CD work_cfbskzb7hzha5apjddr27rkukm 105 27 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 28 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 105 29 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 30 ST11 ST11 NNP work_cfbskzb7hzha5apjddr27rkukm 105 31 ST26 ST26 NNP work_cfbskzb7hzha5apjddr27rkukm 105 32 , , , work_cfbskzb7hzha5apjddr27rkukm 105 33 ST11 ST11 NNP work_cfbskzb7hzha5apjddr27rkukm 105 34 Insertion Insertion NNP work_cfbskzb7hzha5apjddr27rkukm 105 35 of of IN work_cfbskzb7hzha5apjddr27rkukm 105 36 IS6110 IS6110 NNP work_cfbskzb7hzha5apjddr27rkukm 105 37 in in IN work_cfbskzb7hzha5apjddr27rkukm 105 38 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 105 39 3 3 CD work_cfbskzb7hzha5apjddr27rkukm 105 40 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 41 225 225 CD work_cfbskzb7hzha5apjddr27rkukm 105 42 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 43 4 4 CD work_cfbskzb7hzha5apjddr27rkukm 105 44 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 45 43 43 CD work_cfbskzb7hzha5apjddr27rkukm 105 46 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 47 43 43 CD work_cfbskzb7hzha5apjddr27rkukm 105 48 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 49 19.1 19.1 CD work_cfbskzb7hzha5apjddr27rkukm 105 50 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 51 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 105 52 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 53 2.3 2.3 CD work_cfbskzb7hzha5apjddr27rkukm 105 54 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 55 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 105 56 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 57 32 32 CD work_cfbskzb7hzha5apjddr27rkukm 105 58 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 59 6 6 CD work_cfbskzb7hzha5apjddr27rkukm 105 60 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 61 21.9 21.9 CD work_cfbskzb7hzha5apjddr27rkukm 105 62 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 63 6 6 CD work_cfbskzb7hzha5apjddr27rkukm 105 64 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 65 7 7 CD work_cfbskzb7hzha5apjddr27rkukm 105 66 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 67 2 2 CD work_cfbskzb7hzha5apjddr27rkukm 105 68 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 105 69 28.6 28.6 CD work_cfbskzb7hzha5apjddr27rkukm 105 70 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 105 71 ST3 ST3 NNP work_cfbskzb7hzha5apjddr27rkukm 105 72 , , , work_cfbskzb7hzha5apjddr27rkukm 105 73 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 105 74 , , , work_cfbskzb7hzha5apjddr27rkukm 105 75 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 105 76 , , , work_cfbskzb7hzha5apjddr27rkukm 105 77 ST22 ST22 NNP work_cfbskzb7hzha5apjddr27rkukm 105 78 , , , work_cfbskzb7hzha5apjddr27rkukm 105 79 ST25 ST25 NNP work_cfbskzb7hzha5apjddr27rkukm 105 80 , , , work_cfbskzb7hzha5apjddr27rkukm 105 81 STK STK NNP work_cfbskzb7hzha5apjddr27rkukm 105 82 , , , work_cfbskzb7hzha5apjddr27rkukm 105 83 STN STN NNP work_cfbskzb7hzha5apjddr27rkukm 105 84 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 105 85 , , , work_cfbskzb7hzha5apjddr27rkukm 105 86 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 105 87 ST3 ST3 NNP work_cfbskzb7hzha5apjddr27rkukm 105 88 , , , work_cfbskzb7hzha5apjddr27rkukm 105 89 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 105 90 , , , work_cfbskzb7hzha5apjddr27rkukm 105 91 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 105 92 , , , work_cfbskzb7hzha5apjddr27rkukm 105 93 ST22 ST22 NNP work_cfbskzb7hzha5apjddr27rkukm 105 94 , , , work_cfbskzb7hzha5apjddr27rkukm 105 95 STK STK NNP work_cfbskzb7hzha5apjddr27rkukm 105 96 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 105 97 , , , work_cfbskzb7hzha5apjddr27rkukm 105 98 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 105 99 FIG FIG NNP work_cfbskzb7hzha5apjddr27rkukm 105 100 . . . work_cfbskzb7hzha5apjddr27rkukm 106 1 2 2 LS work_cfbskzb7hzha5apjddr27rkukm 106 2 . . . work_cfbskzb7hzha5apjddr27rkukm 107 1 Scheme scheme NN work_cfbskzb7hzha5apjddr27rkukm 107 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 107 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 107 4 proposed propose VBN work_cfbskzb7hzha5apjddr27rkukm 107 5 evolution evolution NN work_cfbskzb7hzha5apjddr27rkukm 107 6 of of IN work_cfbskzb7hzha5apjddr27rkukm 107 7 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 107 8 lineages lineage NNS work_cfbskzb7hzha5apjddr27rkukm 107 9 . . . work_cfbskzb7hzha5apjddr27rkukm 108 1 The the DT work_cfbskzb7hzha5apjddr27rkukm 108 2 scheme scheme NN work_cfbskzb7hzha5apjddr27rkukm 108 3 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 108 4 based base VBN work_cfbskzb7hzha5apjddr27rkukm 108 5 on on IN work_cfbskzb7hzha5apjddr27rkukm 108 6 the the DT work_cfbskzb7hzha5apjddr27rkukm 108 7 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 108 8 of of IN work_cfbskzb7hzha5apjddr27rkukm 108 9 genomic genomic JJ work_cfbskzb7hzha5apjddr27rkukm 108 10 regions region NNS work_cfbskzb7hzha5apjddr27rkukm 108 11 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 108 12 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 108 13 , , , work_cfbskzb7hzha5apjddr27rkukm 108 14 region region NN work_cfbskzb7hzha5apjddr27rkukm 108 15 of of IN work_cfbskzb7hzha5apjddr27rkukm 108 16 difference difference NN work_cfbskzb7hzha5apjddr27rkukm 108 17 , , , work_cfbskzb7hzha5apjddr27rkukm 108 18 shown show VBN work_cfbskzb7hzha5apjddr27rkukm 108 19 in in IN work_cfbskzb7hzha5apjddr27rkukm 108 20 grey grey JJ work_cfbskzb7hzha5apjddr27rkukm 108 21 rectangles rectangle NNS work_cfbskzb7hzha5apjddr27rkukm 108 22 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 108 23 , , , work_cfbskzb7hzha5apjddr27rkukm 108 24 the the DT work_cfbskzb7hzha5apjddr27rkukm 108 25 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 108 26 region region NN work_cfbskzb7hzha5apjddr27rkukm 108 27 with with IN work_cfbskzb7hzha5apjddr27rkukm 108 28 IS6110 is6110 NN work_cfbskzb7hzha5apjddr27rkukm 108 29 insertions insertion NNS work_cfbskzb7hzha5apjddr27rkukm 108 30 , , , work_cfbskzb7hzha5apjddr27rkukm 108 31 and and CC work_cfbskzb7hzha5apjddr27rkukm 108 32 types type NNS work_cfbskzb7hzha5apjddr27rkukm 108 33 of of IN work_cfbskzb7hzha5apjddr27rkukm 108 34 sequence sequence NN work_cfbskzb7hzha5apjddr27rkukm 108 35 designations designation NNS work_cfbskzb7hzha5apjddr27rkukm 108 36 from from IN work_cfbskzb7hzha5apjddr27rkukm 108 37 the the DT work_cfbskzb7hzha5apjddr27rkukm 108 38 studies study NNS work_cfbskzb7hzha5apjddr27rkukm 108 39 of of IN work_cfbskzb7hzha5apjddr27rkukm 108 40 Filliol Filliol NNP work_cfbskzb7hzha5apjddr27rkukm 108 41 et et FW work_cfbskzb7hzha5apjddr27rkukm 108 42 al al NNP work_cfbskzb7hzha5apjddr27rkukm 108 43 . . . work_cfbskzb7hzha5apjddr27rkukm 109 1 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 109 2 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 109 3 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 109 4 and and CC work_cfbskzb7hzha5apjddr27rkukm 109 5 Iwamoto Iwamoto NNP work_cfbskzb7hzha5apjddr27rkukm 109 6 et et NNP work_cfbskzb7hzha5apjddr27rkukm 109 7 al al NNP work_cfbskzb7hzha5apjddr27rkukm 109 8 . . . work_cfbskzb7hzha5apjddr27rkukm 110 1 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 110 2 14 14 CD work_cfbskzb7hzha5apjddr27rkukm 110 3 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 110 4 . . . work_cfbskzb7hzha5apjddr27rkukm 111 1 1394 1394 CD work_cfbskzb7hzha5apjddr27rkukm 111 2 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 111 3 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 111 4 and and CC work_cfbskzb7hzha5apjddr27rkukm 111 5 Infection Infection NNP work_cfbskzb7hzha5apjddr27rkukm 111 6 , , , work_cfbskzb7hzha5apjddr27rkukm 111 7 Volume volume NN work_cfbskzb7hzha5apjddr27rkukm 111 8 17 17 CD work_cfbskzb7hzha5apjddr27rkukm 111 9 Number number NN work_cfbskzb7hzha5apjddr27rkukm 111 10 9 9 CD work_cfbskzb7hzha5apjddr27rkukm 111 11 , , , work_cfbskzb7hzha5apjddr27rkukm 111 12 September September NNP work_cfbskzb7hzha5apjddr27rkukm 111 13 2011 2011 CD work_cfbskzb7hzha5apjddr27rkukm 111 14 CMI CMI NNP work_cfbskzb7hzha5apjddr27rkukm 111 15 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 111 16 The the DT work_cfbskzb7hzha5apjddr27rkukm 111 17 Authors Authors NNPS work_cfbskzb7hzha5apjddr27rkukm 111 18 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 111 19 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 111 20 and and CC work_cfbskzb7hzha5apjddr27rkukm 111 21 Infection Infection NNP work_cfbskzb7hzha5apjddr27rkukm 111 22 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 111 23 European European NNP work_cfbskzb7hzha5apjddr27rkukm 111 24 Society Society NNP work_cfbskzb7hzha5apjddr27rkukm 111 25 of of IN work_cfbskzb7hzha5apjddr27rkukm 111 26 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 111 27 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 111 28 and and CC work_cfbskzb7hzha5apjddr27rkukm 111 29 Infectious Infectious NNP work_cfbskzb7hzha5apjddr27rkukm 111 30 Diseases Diseases NNPS work_cfbskzb7hzha5apjddr27rkukm 111 31 , , , work_cfbskzb7hzha5apjddr27rkukm 111 32 CMI CMI NNP work_cfbskzb7hzha5apjddr27rkukm 111 33 , , , work_cfbskzb7hzha5apjddr27rkukm 111 34 17 17 CD work_cfbskzb7hzha5apjddr27rkukm 111 35 , , , work_cfbskzb7hzha5apjddr27rkukm 111 36 1391–1396 1391–1396 CD work_cfbskzb7hzha5apjddr27rkukm 111 37 has have VBZ work_cfbskzb7hzha5apjddr27rkukm 111 38 been be VBN work_cfbskzb7hzha5apjddr27rkukm 111 39 recently recently RB work_cfbskzb7hzha5apjddr27rkukm 111 40 shown show VBN work_cfbskzb7hzha5apjddr27rkukm 111 41 that that IN work_cfbskzb7hzha5apjddr27rkukm 111 42 the the DT work_cfbskzb7hzha5apjddr27rkukm 111 43 product product NN work_cfbskzb7hzha5apjddr27rkukm 111 44 of of IN work_cfbskzb7hzha5apjddr27rkukm 111 45 mutT2 mutt2 ADD work_cfbskzb7hzha5apjddr27rkukm 111 46 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 111 47 unlikely unlikely JJ work_cfbskzb7hzha5apjddr27rkukm 111 48 to to TO work_cfbskzb7hzha5apjddr27rkukm 111 49 function function VB work_cfbskzb7hzha5apjddr27rkukm 111 50 as as IN work_cfbskzb7hzha5apjddr27rkukm 111 51 a a DT work_cfbskzb7hzha5apjddr27rkukm 111 52 DNA dna NN work_cfbskzb7hzha5apjddr27rkukm 111 53 repair repair NN work_cfbskzb7hzha5apjddr27rkukm 111 54 enzyme enzyme NNS work_cfbskzb7hzha5apjddr27rkukm 111 55 , , , work_cfbskzb7hzha5apjddr27rkukm 111 56 its -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 111 57 role role NN work_cfbskzb7hzha5apjddr27rkukm 111 58 in in IN work_cfbskzb7hzha5apjddr27rkukm 111 59 regu- regu- JJ work_cfbskzb7hzha5apjddr27rkukm 111 60 lating lating NN work_cfbskzb7hzha5apjddr27rkukm 111 61 the the DT work_cfbskzb7hzha5apjddr27rkukm 111 62 availability availability NN work_cfbskzb7hzha5apjddr27rkukm 111 63 of of IN work_cfbskzb7hzha5apjddr27rkukm 111 64 cellular cellular JJ work_cfbskzb7hzha5apjddr27rkukm 111 65 cytidine cytidine NN work_cfbskzb7hzha5apjddr27rkukm 111 66 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 111 67 triphosphate triphosphate NN work_cfbskzb7hzha5apjddr27rkukm 111 68 may may MD work_cfbskzb7hzha5apjddr27rkukm 111 69 help help VB work_cfbskzb7hzha5apjddr27rkukm 111 70 explain explain VB work_cfbskzb7hzha5apjddr27rkukm 111 71 the the DT work_cfbskzb7hzha5apjddr27rkukm 111 72 success success NN work_cfbskzb7hzha5apjddr27rkukm 111 73 of of IN work_cfbskzb7hzha5apjddr27rkukm 111 74 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 111 75 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 111 76 expressing express VBG work_cfbskzb7hzha5apjddr27rkukm 111 77 the the DT work_cfbskzb7hzha5apjddr27rkukm 111 78 mutated mutate VBN work_cfbskzb7hzha5apjddr27rkukm 111 79 mutT2 mutt2 ADD work_cfbskzb7hzha5apjddr27rkukm 111 80 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 111 81 26 26 CD work_cfbskzb7hzha5apjddr27rkukm 111 82 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 111 83 . . . work_cfbskzb7hzha5apjddr27rkukm 112 1 Mutations mutation NNS work_cfbskzb7hzha5apjddr27rkukm 112 2 in in IN work_cfbskzb7hzha5apjddr27rkukm 112 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 112 4 mutT2 mutt2 ADD work_cfbskzb7hzha5apjddr27rkukm 112 5 and and CC work_cfbskzb7hzha5apjddr27rkukm 112 6 mutT4 mutT4 NNS work_cfbskzb7hzha5apjddr27rkukm 112 7 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 112 8 occur occur VBP work_cfbskzb7hzha5apjddr27rkukm 112 9 in in IN work_cfbskzb7hzha5apjddr27rkukm 112 10 the the DT work_cfbskzb7hzha5apjddr27rkukm 112 11 most most RBS work_cfbskzb7hzha5apjddr27rkukm 112 12 recently recently RB work_cfbskzb7hzha5apjddr27rkukm 112 13 evolved evolve VBN work_cfbskzb7hzha5apjddr27rkukm 112 14 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 112 15 lineages lineage NNS work_cfbskzb7hzha5apjddr27rkukm 112 16 , , , work_cfbskzb7hzha5apjddr27rkukm 112 17 which which WDT work_cfbskzb7hzha5apjddr27rkukm 112 18 are be VBP work_cfbskzb7hzha5apjddr27rkukm 112 19 associ- associ- RB work_cfbskzb7hzha5apjddr27rkukm 112 20 ated ate VBN work_cfbskzb7hzha5apjddr27rkukm 112 21 with with IN work_cfbskzb7hzha5apjddr27rkukm 112 22 an an DT work_cfbskzb7hzha5apjddr27rkukm 112 23 increased increase VBN work_cfbskzb7hzha5apjddr27rkukm 112 24 ability ability NN work_cfbskzb7hzha5apjddr27rkukm 112 25 to to TO work_cfbskzb7hzha5apjddr27rkukm 112 26 spread spread VB work_cfbskzb7hzha5apjddr27rkukm 112 27 and and CC work_cfbskzb7hzha5apjddr27rkukm 112 28 cause cause VB work_cfbskzb7hzha5apjddr27rkukm 112 29 disease disease NN work_cfbskzb7hzha5apjddr27rkukm 112 30 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 112 31 27 27 CD work_cfbskzb7hzha5apjddr27rkukm 112 32 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 112 33 . . . work_cfbskzb7hzha5apjddr27rkukm 113 1 In in IN work_cfbskzb7hzha5apjddr27rkukm 113 2 the the DT work_cfbskzb7hzha5apjddr27rkukm 113 3 present present JJ work_cfbskzb7hzha5apjddr27rkukm 113 4 study study NN work_cfbskzb7hzha5apjddr27rkukm 113 5 , , , work_cfbskzb7hzha5apjddr27rkukm 113 6 mutations mutation NNS work_cfbskzb7hzha5apjddr27rkukm 113 7 were be VBD work_cfbskzb7hzha5apjddr27rkukm 113 8 observed observe VBN work_cfbskzb7hzha5apjddr27rkukm 113 9 in in IN work_cfbskzb7hzha5apjddr27rkukm 113 10 most most JJS work_cfbskzb7hzha5apjddr27rkukm 113 11 of of IN work_cfbskzb7hzha5apjddr27rkukm 113 12 the the DT work_cfbskzb7hzha5apjddr27rkukm 113 13 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 113 14 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 113 15 , , , work_cfbskzb7hzha5apjddr27rkukm 113 16 except except IN work_cfbskzb7hzha5apjddr27rkukm 113 17 ST11 ST11 NNP work_cfbskzb7hzha5apjddr27rkukm 113 18 and and CC work_cfbskzb7hzha5apjddr27rkukm 113 19 ST26 ST26 NNP work_cfbskzb7hzha5apjddr27rkukm 113 20 . . . work_cfbskzb7hzha5apjddr27rkukm 114 1 Thus thus RB work_cfbskzb7hzha5apjddr27rkukm 114 2 , , , work_cfbskzb7hzha5apjddr27rkukm 114 3 our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 114 4 data datum NNS work_cfbskzb7hzha5apjddr27rkukm 114 5 do do VBP work_cfbskzb7hzha5apjddr27rkukm 114 6 not not RB work_cfbskzb7hzha5apjddr27rkukm 114 7 demonstrate demonstrate VB work_cfbskzb7hzha5apjddr27rkukm 114 8 an an DT work_cfbskzb7hzha5apjddr27rkukm 114 9 association association NN work_cfbskzb7hzha5apjddr27rkukm 114 10 between between IN work_cfbskzb7hzha5apjddr27rkukm 114 11 the the DT work_cfbskzb7hzha5apjddr27rkukm 114 12 pres- pres- NN work_cfbskzb7hzha5apjddr27rkukm 114 13 ence ence NN work_cfbskzb7hzha5apjddr27rkukm 114 14 of of IN work_cfbskzb7hzha5apjddr27rkukm 114 15 mutations mutation NNS work_cfbskzb7hzha5apjddr27rkukm 114 16 in in IN work_cfbskzb7hzha5apjddr27rkukm 114 17 these these DT work_cfbskzb7hzha5apjddr27rkukm 114 18 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 114 19 and and CC work_cfbskzb7hzha5apjddr27rkukm 114 20 MDR MDR NNP work_cfbskzb7hzha5apjddr27rkukm 114 21 , , , work_cfbskzb7hzha5apjddr27rkukm 114 22 but but CC work_cfbskzb7hzha5apjddr27rkukm 114 23 an an DT work_cfbskzb7hzha5apjddr27rkukm 114 24 association association NN work_cfbskzb7hzha5apjddr27rkukm 114 25 between between IN work_cfbskzb7hzha5apjddr27rkukm 114 26 the the DT work_cfbskzb7hzha5apjddr27rkukm 114 27 SNP SNP NNP work_cfbskzb7hzha5apjddr27rkukm 114 28 subclassification subclassification NN work_cfbskzb7hzha5apjddr27rkukm 114 29 and and CC work_cfbskzb7hzha5apjddr27rkukm 114 30 polymorphism polymorphism NN work_cfbskzb7hzha5apjddr27rkukm 114 31 of of IN work_cfbskzb7hzha5apjddr27rkukm 114 32 the the DT work_cfbskzb7hzha5apjddr27rkukm 114 33 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 114 34 . . . work_cfbskzb7hzha5apjddr27rkukm 115 1 We -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 115 2 have have VBP work_cfbskzb7hzha5apjddr27rkukm 115 3 also also RB work_cfbskzb7hzha5apjddr27rkukm 115 4 demonstrated demonstrate VBN work_cfbskzb7hzha5apjddr27rkukm 115 5 that that DT work_cfbskzb7hzha5apjddr27rkukm 115 6 sublineage sublineage NN work_cfbskzb7hzha5apjddr27rkukm 115 7 ST26 ST26 NNP work_cfbskzb7hzha5apjddr27rkukm 115 8 occurs occur VBZ work_cfbskzb7hzha5apjddr27rkukm 115 9 at at IN work_cfbskzb7hzha5apjddr27rkukm 115 10 a a DT work_cfbskzb7hzha5apjddr27rkukm 115 11 higher high JJR work_cfbskzb7hzha5apjddr27rkukm 115 12 frequency frequency NN work_cfbskzb7hzha5apjddr27rkukm 115 13 in in IN work_cfbskzb7hzha5apjddr27rkukm 115 14 the the DT work_cfbskzb7hzha5apjddr27rkukm 115 15 MDR MDR NNP work_cfbskzb7hzha5apjddr27rkukm 115 16 population population NN work_cfbskzb7hzha5apjddr27rkukm 115 17 . . . work_cfbskzb7hzha5apjddr27rkukm 116 1 To to IN work_cfbskzb7hzha5apjddr27rkukm 116 2 our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 116 3 surprise surprise NN work_cfbskzb7hzha5apjddr27rkukm 116 4 , , , work_cfbskzb7hzha5apjddr27rkukm 116 5 our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 116 6 findings finding NNS work_cfbskzb7hzha5apjddr27rkukm 116 7 are be VBP work_cfbskzb7hzha5apjddr27rkukm 116 8 similar similar JJ work_cfbskzb7hzha5apjddr27rkukm 116 9 to to IN work_cfbskzb7hzha5apjddr27rkukm 116 10 those those DT work_cfbskzb7hzha5apjddr27rkukm 116 11 of of IN work_cfbskzb7hzha5apjddr27rkukm 116 12 Wada Wada NNP work_cfbskzb7hzha5apjddr27rkukm 116 13 et et FW work_cfbskzb7hzha5apjddr27rkukm 116 14 al al NNP work_cfbskzb7hzha5apjddr27rkukm 116 15 . . . work_cfbskzb7hzha5apjddr27rkukm 117 1 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 117 2 25 25 CD work_cfbskzb7hzha5apjddr27rkukm 117 3 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 117 4 . . . work_cfbskzb7hzha5apjddr27rkukm 118 1 Our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 118 2 24-loci 24-loci CD work_cfbskzb7hzha5apjddr27rkukm 118 3 MIRU MIRU NNP work_cfbskzb7hzha5apjddr27rkukm 118 4 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 118 5 VNTR vntr NN work_cfbskzb7hzha5apjddr27rkukm 118 6 data datum NNS work_cfbskzb7hzha5apjddr27rkukm 118 7 also also RB work_cfbskzb7hzha5apjddr27rkukm 118 8 support support VBP work_cfbskzb7hzha5apjddr27rkukm 118 9 the the DT work_cfbskzb7hzha5apjddr27rkukm 118 10 hypothesis hypothesis NN work_cfbskzb7hzha5apjddr27rkukm 118 11 that that WDT work_cfbskzb7hzha5apjddr27rkukm 118 12 parts part NNS work_cfbskzb7hzha5apjddr27rkukm 118 13 of of IN work_cfbskzb7hzha5apjddr27rkukm 118 14 the the DT work_cfbskzb7hzha5apjddr27rkukm 118 15 ancestral ancestral JJ work_cfbskzb7hzha5apjddr27rkukm 118 16 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 118 17 lineage lineage NN work_cfbskzb7hzha5apjddr27rkukm 118 18 may may MD work_cfbskzb7hzha5apjddr27rkukm 118 19 come come VB work_cfbskzb7hzha5apjddr27rkukm 118 20 from from IN work_cfbskzb7hzha5apjddr27rkukm 118 21 two two CD work_cfbskzb7hzha5apjddr27rkukm 118 22 different different JJ work_cfbskzb7hzha5apjddr27rkukm 118 23 branches branch NNS work_cfbskzb7hzha5apjddr27rkukm 118 24 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 118 25 Fig fig NN work_cfbskzb7hzha5apjddr27rkukm 118 26 . . . work_cfbskzb7hzha5apjddr27rkukm 119 1 1 1 LS work_cfbskzb7hzha5apjddr27rkukm 119 2 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 119 3 . . . work_cfbskzb7hzha5apjddr27rkukm 120 1 This this DT work_cfbskzb7hzha5apjddr27rkukm 120 2 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 120 3 contrary contrary JJ work_cfbskzb7hzha5apjddr27rkukm 120 4 to to IN work_cfbskzb7hzha5apjddr27rkukm 120 5 colonal colonal JJ work_cfbskzb7hzha5apjddr27rkukm 120 6 evolution evolution NN work_cfbskzb7hzha5apjddr27rkukm 120 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 120 8 MTB MTB NNP work_cfbskzb7hzha5apjddr27rkukm 120 9 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 120 10 28 28 CD work_cfbskzb7hzha5apjddr27rkukm 120 11 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 120 12 . . . work_cfbskzb7hzha5apjddr27rkukm 121 1 However however RB work_cfbskzb7hzha5apjddr27rkukm 121 2 , , , work_cfbskzb7hzha5apjddr27rkukm 121 3 further further RB work_cfbskzb7hzha5apjddr27rkukm 121 4 investi- investi- XX work_cfbskzb7hzha5apjddr27rkukm 121 5 gation gation NN work_cfbskzb7hzha5apjddr27rkukm 121 6 of of IN work_cfbskzb7hzha5apjddr27rkukm 121 7 this this DT work_cfbskzb7hzha5apjddr27rkukm 121 8 dual dual JJ work_cfbskzb7hzha5apjddr27rkukm 121 9 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 121 10 origin origin NN work_cfbskzb7hzha5apjddr27rkukm 121 11 possibility possibility NN work_cfbskzb7hzha5apjddr27rkukm 121 12 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 121 13 required require VBN work_cfbskzb7hzha5apjddr27rkukm 121 14 . . . work_cfbskzb7hzha5apjddr27rkukm 122 1 Furthermore furthermore RB work_cfbskzb7hzha5apjddr27rkukm 122 2 , , , work_cfbskzb7hzha5apjddr27rkukm 122 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 122 4 12-loci 12-loci CD work_cfbskzb7hzha5apjddr27rkukm 122 5 MIRU MIRU NNP work_cfbskzb7hzha5apjddr27rkukm 122 6 pattern pattern NN work_cfbskzb7hzha5apjddr27rkukm 122 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 122 8 one one CD work_cfbskzb7hzha5apjddr27rkukm 122 9 of of IN work_cfbskzb7hzha5apjddr27rkukm 122 10 the the DT work_cfbskzb7hzha5apjddr27rkukm 122 11 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 122 12 from from IN work_cfbskzb7hzha5apjddr27rkukm 122 13 the the DT work_cfbskzb7hzha5apjddr27rkukm 122 14 present present JJ work_cfbskzb7hzha5apjddr27rkukm 122 15 investigation investigation NN work_cfbskzb7hzha5apjddr27rkukm 122 16 was be VBD work_cfbskzb7hzha5apjddr27rkukm 122 17 determined determined JJ work_cfbskzb7hzha5apjddr27rkukm 122 18 to to TO work_cfbskzb7hzha5apjddr27rkukm 122 19 be be VB work_cfbskzb7hzha5apjddr27rkukm 122 20 223325173533 223325173533 CD work_cfbskzb7hzha5apjddr27rkukm 122 21 , , , work_cfbskzb7hzha5apjddr27rkukm 122 22 which which WDT work_cfbskzb7hzha5apjddr27rkukm 122 23 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 122 24 the the DT work_cfbskzb7hzha5apjddr27rkukm 122 25 most most RBS work_cfbskzb7hzha5apjddr27rkukm 122 26 predominant predominant JJ work_cfbskzb7hzha5apjddr27rkukm 122 27 pattern pattern NN work_cfbskzb7hzha5apjddr27rkukm 122 28 for for IN work_cfbskzb7hzha5apjddr27rkukm 122 29 the the DT work_cfbskzb7hzha5apjddr27rkukm 122 30 classical classical JJ work_cfbskzb7hzha5apjddr27rkukm 122 31 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 122 32 type type NN work_cfbskzb7hzha5apjddr27rkukm 122 33 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 122 34 ST1 st1 NN work_cfbskzb7hzha5apjddr27rkukm 122 35 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 122 36 in in IN work_cfbskzb7hzha5apjddr27rkukm 122 37 Taiwan Taiwan NNP work_cfbskzb7hzha5apjddr27rkukm 122 38 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 122 39 16 16 CD work_cfbskzb7hzha5apjddr27rkukm 122 40 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 122 41 . . . work_cfbskzb7hzha5apjddr27rkukm 123 1 Interestingly interestingly RB work_cfbskzb7hzha5apjddr27rkukm 123 2 , , , work_cfbskzb7hzha5apjddr27rkukm 123 3 this this DT work_cfbskzb7hzha5apjddr27rkukm 123 4 strain strain NN work_cfbskzb7hzha5apjddr27rkukm 123 5 was be VBD work_cfbskzb7hzha5apjddr27rkukm 123 6 also also RB work_cfbskzb7hzha5apjddr27rkukm 123 7 found find VBN work_cfbskzb7hzha5apjddr27rkukm 123 8 in in IN work_cfbskzb7hzha5apjddr27rkukm 123 9 other other JJ work_cfbskzb7hzha5apjddr27rkukm 123 10 countries country NNS work_cfbskzb7hzha5apjddr27rkukm 123 11 , , , work_cfbskzb7hzha5apjddr27rkukm 123 12 including include VBG work_cfbskzb7hzha5apjddr27rkukm 123 13 Russia Russia NNP work_cfbskzb7hzha5apjddr27rkukm 123 14 , , , work_cfbskzb7hzha5apjddr27rkukm 123 15 China China NNP work_cfbskzb7hzha5apjddr27rkukm 123 16 , , , work_cfbskzb7hzha5apjddr27rkukm 123 17 Japan Japan NNP work_cfbskzb7hzha5apjddr27rkukm 123 18 and and CC work_cfbskzb7hzha5apjddr27rkukm 123 19 Vietnam Vietnam NNP work_cfbskzb7hzha5apjddr27rkukm 123 20 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 123 21 29 29 CD work_cfbskzb7hzha5apjddr27rkukm 123 22 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 123 23 . . . work_cfbskzb7hzha5apjddr27rkukm 124 1 Sequence sequence NN work_cfbskzb7hzha5apjddr27rkukm 124 2 typing typing NN work_cfbskzb7hzha5apjddr27rkukm 124 3 per- per- NN work_cfbskzb7hzha5apjddr27rkukm 124 4 mitted mitte VBD work_cfbskzb7hzha5apjddr27rkukm 124 5 us -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 124 6 to to TO work_cfbskzb7hzha5apjddr27rkukm 124 7 further further RB work_cfbskzb7hzha5apjddr27rkukm 124 8 subdivide subdivide VB work_cfbskzb7hzha5apjddr27rkukm 124 9 this this DT work_cfbskzb7hzha5apjddr27rkukm 124 10 major major JJ work_cfbskzb7hzha5apjddr27rkukm 124 11 group group NN work_cfbskzb7hzha5apjddr27rkukm 124 12 of of IN work_cfbskzb7hzha5apjddr27rkukm 124 13 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 124 14 into into IN work_cfbskzb7hzha5apjddr27rkukm 124 15 ST3 ST3 NNP work_cfbskzb7hzha5apjddr27rkukm 124 16 , , , work_cfbskzb7hzha5apjddr27rkukm 124 17 ST10 ST10 NNP work_cfbskzb7hzha5apjddr27rkukm 124 18 , , , work_cfbskzb7hzha5apjddr27rkukm 124 19 ST19 ST19 NNP work_cfbskzb7hzha5apjddr27rkukm 124 20 , , , work_cfbskzb7hzha5apjddr27rkukm 124 21 ST22 ST22 NNP work_cfbskzb7hzha5apjddr27rkukm 124 22 and and CC work_cfbskzb7hzha5apjddr27rkukm 124 23 ST25 ST25 NNP work_cfbskzb7hzha5apjddr27rkukm 124 24 in in IN work_cfbskzb7hzha5apjddr27rkukm 124 25 our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 124 26 studies study NNS work_cfbskzb7hzha5apjddr27rkukm 124 27 . . . work_cfbskzb7hzha5apjddr27rkukm 125 1 We -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 125 2 believe believe VBP work_cfbskzb7hzha5apjddr27rkukm 125 3 that that IN work_cfbskzb7hzha5apjddr27rkukm 125 4 these these DT work_cfbskzb7hzha5apjddr27rkukm 125 5 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 125 6 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 125 7 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 125 8 , , , work_cfbskzb7hzha5apjddr27rkukm 125 9 with with IN work_cfbskzb7hzha5apjddr27rkukm 125 10 their -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 125 11 high high JJ work_cfbskzb7hzha5apjddr27rkukm 125 12 degree degree NN work_cfbskzb7hzha5apjddr27rkukm 125 13 of of IN work_cfbskzb7hzha5apjddr27rkukm 125 14 transmissibility transmissibility NN work_cfbskzb7hzha5apjddr27rkukm 125 15 , , , work_cfbskzb7hzha5apjddr27rkukm 125 16 are be VBP work_cfbskzb7hzha5apjddr27rkukm 125 17 currently currently RB work_cfbskzb7hzha5apjddr27rkukm 125 18 spreading spread VBG work_cfbskzb7hzha5apjddr27rkukm 125 19 throughout throughout IN work_cfbskzb7hzha5apjddr27rkukm 125 20 the the DT work_cfbskzb7hzha5apjddr27rkukm 125 21 world world NN work_cfbskzb7hzha5apjddr27rkukm 125 22 . . . work_cfbskzb7hzha5apjddr27rkukm 126 1 It -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 126 2 was be VBD work_cfbskzb7hzha5apjddr27rkukm 126 3 previously previously RB work_cfbskzb7hzha5apjddr27rkukm 126 4 reported report VBN work_cfbskzb7hzha5apjddr27rkukm 126 5 that that IN work_cfbskzb7hzha5apjddr27rkukm 126 6 the the DT work_cfbskzb7hzha5apjddr27rkukm 126 7 BCG BCG NNP work_cfbskzb7hzha5apjddr27rkukm 126 8 vaccina- vaccina- NN work_cfbskzb7hzha5apjddr27rkukm 126 9 tion tion NN work_cfbskzb7hzha5apjddr27rkukm 126 10 favours favour VBZ work_cfbskzb7hzha5apjddr27rkukm 126 11 the the DT work_cfbskzb7hzha5apjddr27rkukm 126 12 positive positive JJ work_cfbskzb7hzha5apjddr27rkukm 126 13 selection selection NN work_cfbskzb7hzha5apjddr27rkukm 126 14 of of IN work_cfbskzb7hzha5apjddr27rkukm 126 15 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 126 16 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 126 17 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 126 18 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 126 19 12 12 CD work_cfbskzb7hzha5apjddr27rkukm 126 20 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 126 21 . . . work_cfbskzb7hzha5apjddr27rkukm 127 1 Our -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 127 2 results result NNS work_cfbskzb7hzha5apjddr27rkukm 127 3 support support VBP work_cfbskzb7hzha5apjddr27rkukm 127 4 this this DT work_cfbskzb7hzha5apjddr27rkukm 127 5 finding finding NN work_cfbskzb7hzha5apjddr27rkukm 127 6 . . . work_cfbskzb7hzha5apjddr27rkukm 128 1 In in IN work_cfbskzb7hzha5apjddr27rkukm 128 2 a a DT work_cfbskzb7hzha5apjddr27rkukm 128 3 previous previous JJ work_cfbskzb7hzha5apjddr27rkukm 128 4 study study NN work_cfbskzb7hzha5apjddr27rkukm 128 5 we -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 128 6 established establish VBD work_cfbskzb7hzha5apjddr27rkukm 128 7 that that IN work_cfbskzb7hzha5apjddr27rkukm 128 8 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 128 9 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 128 10 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 128 11 are be VBP work_cfbskzb7hzha5apjddr27rkukm 128 12 the the DT work_cfbskzb7hzha5apjddr27rkukm 128 13 most most RBS work_cfbskzb7hzha5apjddr27rkukm 128 14 predominant predominant JJ work_cfbskzb7hzha5apjddr27rkukm 128 15 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 128 16 in in IN work_cfbskzb7hzha5apjddr27rkukm 128 17 Taiwan Taiwan NNP work_cfbskzb7hzha5apjddr27rkukm 128 18 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 128 19 16,17 16,17 CD work_cfbskzb7hzha5apjddr27rkukm 128 20 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 128 21 . . . work_cfbskzb7hzha5apjddr27rkukm 129 1 Moreover moreover RB work_cfbskzb7hzha5apjddr27rkukm 129 2 , , , work_cfbskzb7hzha5apjddr27rkukm 129 3 a a DT work_cfbskzb7hzha5apjddr27rkukm 129 4 recent recent JJ work_cfbskzb7hzha5apjddr27rkukm 129 5 study study NN work_cfbskzb7hzha5apjddr27rkukm 129 6 showed show VBD work_cfbskzb7hzha5apjddr27rkukm 129 7 that that IN work_cfbskzb7hzha5apjddr27rkukm 129 8 80 80 CD work_cfbskzb7hzha5apjddr27rkukm 129 9 % % NN work_cfbskzb7hzha5apjddr27rkukm 129 10 of of IN work_cfbskzb7hzha5apjddr27rkukm 129 11 the the DT work_cfbskzb7hzha5apjddr27rkukm 129 12 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 129 13 from from IN work_cfbskzb7hzha5apjddr27rkukm 129 14 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 129 15 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 129 16 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 129 17 , , , work_cfbskzb7hzha5apjddr27rkukm 129 18 but but CC work_cfbskzb7hzha5apjddr27rkukm 129 19 not not RB work_cfbskzb7hzha5apjddr27rkukm 129 20 from from IN work_cfbskzb7hzha5apjddr27rkukm 129 21 ancient ancient JJ work_cfbskzb7hzha5apjddr27rkukm 129 22 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 129 23 , , , work_cfbskzb7hzha5apjddr27rkukm 129 24 synthesize synthesize VB work_cfbskzb7hzha5apjddr27rkukm 129 25 relatively relatively RB work_cfbskzb7hzha5apjddr27rkukm 129 26 high high JJ work_cfbskzb7hzha5apjddr27rkukm 129 27 quantities quantity NNS work_cfbskzb7hzha5apjddr27rkukm 129 28 of of IN work_cfbskzb7hzha5apjddr27rkukm 129 29 phenolic phenolic JJ work_cfbskzb7hzha5apjddr27rkukm 129 30 glycolipid glycolipid NNP work_cfbskzb7hzha5apjddr27rkukm 129 31 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 129 32 PGL PGL NNP work_cfbskzb7hzha5apjddr27rkukm 129 33 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 129 34 , , , work_cfbskzb7hzha5apjddr27rkukm 129 35 which which WDT work_cfbskzb7hzha5apjddr27rkukm 129 36 suppresses suppress VBZ work_cfbskzb7hzha5apjddr27rkukm 129 37 proinflammatory proinflammatory JJ work_cfbskzb7hzha5apjddr27rkukm 129 38 cytokines cytokine NNS work_cfbskzb7hzha5apjddr27rkukm 129 39 . . . work_cfbskzb7hzha5apjddr27rkukm 130 1 These these DT work_cfbskzb7hzha5apjddr27rkukm 130 2 findings finding NNS work_cfbskzb7hzha5apjddr27rkukm 130 3 suggest suggest VBP work_cfbskzb7hzha5apjddr27rkukm 130 4 that that IN work_cfbskzb7hzha5apjddr27rkukm 130 5 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 130 6 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 130 7 may may MD work_cfbskzb7hzha5apjddr27rkukm 130 8 be be VB work_cfbskzb7hzha5apjddr27rkukm 130 9 more more RBR work_cfbskzb7hzha5apjddr27rkukm 130 10 pathogenic pathogenic JJ work_cfbskzb7hzha5apjddr27rkukm 130 11 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 130 12 30 30 CD work_cfbskzb7hzha5apjddr27rkukm 130 13 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 130 14 . . . work_cfbskzb7hzha5apjddr27rkukm 131 1 In in IN work_cfbskzb7hzha5apjddr27rkukm 131 2 addition addition NN work_cfbskzb7hzha5apjddr27rkukm 131 3 , , , work_cfbskzb7hzha5apjddr27rkukm 131 4 studies study NNS work_cfbskzb7hzha5apjddr27rkukm 131 5 have have VBP work_cfbskzb7hzha5apjddr27rkukm 131 6 shown show VBN work_cfbskzb7hzha5apjddr27rkukm 131 7 that that IN work_cfbskzb7hzha5apjddr27rkukm 131 8 the the DT work_cfbskzb7hzha5apjddr27rkukm 131 9 Ag85 Ag85 NNP work_cfbskzb7hzha5apjddr27rkukm 131 10 complex complex NN work_cfbskzb7hzha5apjddr27rkukm 131 11 plays play VBZ work_cfbskzb7hzha5apjddr27rkukm 131 12 a a DT work_cfbskzb7hzha5apjddr27rkukm 131 13 role role NN work_cfbskzb7hzha5apjddr27rkukm 131 14 in in IN work_cfbskzb7hzha5apjddr27rkukm 131 15 survival survival NN work_cfbskzb7hzha5apjddr27rkukm 131 16 of of IN work_cfbskzb7hzha5apjddr27rkukm 131 17 tuberculosis tuberculosis NNP work_cfbskzb7hzha5apjddr27rkukm 131 18 bacilli bacilli NNP work_cfbskzb7hzha5apjddr27rkukm 131 19 and and CC work_cfbskzb7hzha5apjddr27rkukm 131 20 their -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 131 21 ability ability NN work_cfbskzb7hzha5apjddr27rkukm 131 22 to to TO work_cfbskzb7hzha5apjddr27rkukm 131 23 escape escape VB work_cfbskzb7hzha5apjddr27rkukm 131 24 the the DT work_cfbskzb7hzha5apjddr27rkukm 131 25 human human JJ work_cfbskzb7hzha5apjddr27rkukm 131 26 immune immune JJ work_cfbskzb7hzha5apjddr27rkukm 131 27 response response NN work_cfbskzb7hzha5apjddr27rkukm 131 28 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 131 29 31 31 CD work_cfbskzb7hzha5apjddr27rkukm 131 30 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 131 31 . . . work_cfbskzb7hzha5apjddr27rkukm 132 1 Although although IN work_cfbskzb7hzha5apjddr27rkukm 132 2 Chuang Chuang NNP work_cfbskzb7hzha5apjddr27rkukm 132 3 et et NNP work_cfbskzb7hzha5apjddr27rkukm 132 4 al al NNP work_cfbskzb7hzha5apjddr27rkukm 132 5 . . . work_cfbskzb7hzha5apjddr27rkukm 133 1 [ [ -LRB- work_cfbskzb7hzha5apjddr27rkukm 133 2 24 24 CD work_cfbskzb7hzha5apjddr27rkukm 133 3 ] ] -RRB- work_cfbskzb7hzha5apjddr27rkukm 133 4 reported report VBD work_cfbskzb7hzha5apjddr27rkukm 133 5 that that IN work_cfbskzb7hzha5apjddr27rkukm 133 6 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 133 7 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 133 8 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 133 9 can can MD work_cfbskzb7hzha5apjddr27rkukm 133 10 be be VB work_cfbskzb7hzha5apjddr27rkukm 133 11 distinguished distinguish VBN work_cfbskzb7hzha5apjddr27rkukm 133 12 based base VBN work_cfbskzb7hzha5apjddr27rkukm 133 13 on on IN work_cfbskzb7hzha5apjddr27rkukm 133 14 SNPs snp NNS work_cfbskzb7hzha5apjddr27rkukm 133 15 in in IN work_cfbskzb7hzha5apjddr27rkukm 133 16 the the DT work_cfbskzb7hzha5apjddr27rkukm 133 17 Ag85 Ag85 NNP work_cfbskzb7hzha5apjddr27rkukm 133 18 complex complex JJ work_cfbskzb7hzha5apjddr27rkukm 133 19 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 133 20 fbpA fbpA NFP work_cfbskzb7hzha5apjddr27rkukm 133 21 and and CC work_cfbskzb7hzha5apjddr27rkukm 133 22 fbpB fbpB NNS work_cfbskzb7hzha5apjddr27rkukm 133 23 , , , work_cfbskzb7hzha5apjddr27rkukm 133 24 in in IN work_cfbskzb7hzha5apjddr27rkukm 133 25 the the DT work_cfbskzb7hzha5apjddr27rkukm 133 26 present present JJ work_cfbskzb7hzha5apjddr27rkukm 133 27 study study NN work_cfbskzb7hzha5apjddr27rkukm 133 28 we -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 133 29 found find VBD work_cfbskzb7hzha5apjddr27rkukm 133 30 that that IN work_cfbskzb7hzha5apjddr27rkukm 133 31 ancestral ancestral JJ work_cfbskzb7hzha5apjddr27rkukm 133 32 and and CC work_cfbskzb7hzha5apjddr27rkukm 133 33 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 133 34 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 133 35 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 133 36 can can MD work_cfbskzb7hzha5apjddr27rkukm 133 37 be be VB work_cfbskzb7hzha5apjddr27rkukm 133 38 distinguished distinguish VBN work_cfbskzb7hzha5apjddr27rkukm 133 39 by by IN work_cfbskzb7hzha5apjddr27rkukm 133 40 an an DT work_cfbskzb7hzha5apjddr27rkukm 133 41 SNP SNP NNP work_cfbskzb7hzha5apjddr27rkukm 133 42 only only RB work_cfbskzb7hzha5apjddr27rkukm 133 43 in in IN work_cfbskzb7hzha5apjddr27rkukm 133 44 fbpB. fbpB. NNP work_cfbskzb7hzha5apjddr27rkukm 134 1 We -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 134 2 also also RB work_cfbskzb7hzha5apjddr27rkukm 134 3 demonstrated demonstrate VBD work_cfbskzb7hzha5apjddr27rkukm 134 4 that that IN work_cfbskzb7hzha5apjddr27rkukm 134 5 most most JJS work_cfbskzb7hzha5apjddr27rkukm 134 6 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 134 7 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 134 8 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 134 9 carry carry VBP work_cfbskzb7hzha5apjddr27rkukm 134 10 a a DT work_cfbskzb7hzha5apjddr27rkukm 134 11 mutated mutate VBN work_cfbskzb7hzha5apjddr27rkukm 134 12 mutT mutt CD work_cfbskzb7hzha5apjddr27rkukm 134 13 gene gene NN work_cfbskzb7hzha5apjddr27rkukm 134 14 and and CC work_cfbskzb7hzha5apjddr27rkukm 134 15 deletion deletion NN work_cfbskzb7hzha5apjddr27rkukm 134 16 RD181 RD181 NNP work_cfbskzb7hzha5apjddr27rkukm 134 17 , , , work_cfbskzb7hzha5apjddr27rkukm 134 18 which which WDT work_cfbskzb7hzha5apjddr27rkukm 134 19 may may MD work_cfbskzb7hzha5apjddr27rkukm 134 20 facilitate facilitate VB work_cfbskzb7hzha5apjddr27rkukm 134 21 their -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 134 22 spreading spread VBG work_cfbskzb7hzha5apjddr27rkukm 134 23 ability ability NN work_cfbskzb7hzha5apjddr27rkukm 134 24 . . . work_cfbskzb7hzha5apjddr27rkukm 135 1 ST26 ST26 NNP work_cfbskzb7hzha5apjddr27rkukm 135 2 should should MD work_cfbskzb7hzha5apjddr27rkukm 135 3 be be VB work_cfbskzb7hzha5apjddr27rkukm 135 4 assigned assign VBN work_cfbskzb7hzha5apjddr27rkukm 135 5 to to IN work_cfbskzb7hzha5apjddr27rkukm 135 6 the the DT work_cfbskzb7hzha5apjddr27rkukm 135 7 early early JJ work_cfbskzb7hzha5apjddr27rkukm 135 8 ancestral ancestral JJ work_cfbskzb7hzha5apjddr27rkukm 135 9 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 135 10 sublineage sublineage NN work_cfbskzb7hzha5apjddr27rkukm 135 11 , , , work_cfbskzb7hzha5apjddr27rkukm 135 12 and and CC work_cfbskzb7hzha5apjddr27rkukm 135 13 did do VBD work_cfbskzb7hzha5apjddr27rkukm 135 14 not not RB work_cfbskzb7hzha5apjddr27rkukm 135 15 have have VB work_cfbskzb7hzha5apjddr27rkukm 135 16 an an DT work_cfbskzb7hzha5apjddr27rkukm 135 17 SNP SNP NNP work_cfbskzb7hzha5apjddr27rkukm 135 18 in in IN work_cfbskzb7hzha5apjddr27rkukm 135 19 mut4 mut4 NN work_cfbskzb7hzha5apjddr27rkukm 135 20 , , , work_cfbskzb7hzha5apjddr27rkukm 135 21 mut2 mut2 NN work_cfbskzb7hzha5apjddr27rkukm 135 22 or or CC work_cfbskzb7hzha5apjddr27rkukm 135 23 ogt ogt NN work_cfbskzb7hzha5apjddr27rkukm 135 24 , , , work_cfbskzb7hzha5apjddr27rkukm 135 25 although although IN work_cfbskzb7hzha5apjddr27rkukm 135 26 it -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 135 27 occurred occur VBD work_cfbskzb7hzha5apjddr27rkukm 135 28 at at IN work_cfbskzb7hzha5apjddr27rkukm 135 29 a a DT work_cfbskzb7hzha5apjddr27rkukm 135 30 signifi- signifi- NN work_cfbskzb7hzha5apjddr27rkukm 135 31 cantly cantly RB work_cfbskzb7hzha5apjddr27rkukm 135 32 high high JJ work_cfbskzb7hzha5apjddr27rkukm 135 33 frequency frequency NN work_cfbskzb7hzha5apjddr27rkukm 135 34 in in IN work_cfbskzb7hzha5apjddr27rkukm 135 35 the the DT work_cfbskzb7hzha5apjddr27rkukm 135 36 MDR MDR NNP work_cfbskzb7hzha5apjddr27rkukm 135 37 population population NN work_cfbskzb7hzha5apjddr27rkukm 135 38 . . . work_cfbskzb7hzha5apjddr27rkukm 136 1 This this DT work_cfbskzb7hzha5apjddr27rkukm 136 2 finding finding NN work_cfbskzb7hzha5apjddr27rkukm 136 3 suggests suggest VBZ work_cfbskzb7hzha5apjddr27rkukm 136 4 that that IN work_cfbskzb7hzha5apjddr27rkukm 136 5 different different JJ work_cfbskzb7hzha5apjddr27rkukm 136 6 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 136 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 136 8 the the DT work_cfbskzb7hzha5apjddr27rkukm 136 9 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 136 10 family family NN work_cfbskzb7hzha5apjddr27rkukm 136 11 may may MD work_cfbskzb7hzha5apjddr27rkukm 136 12 differ differ VB work_cfbskzb7hzha5apjddr27rkukm 136 13 in in IN work_cfbskzb7hzha5apjddr27rkukm 136 14 their -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 136 15 mechanisms mechanism NNS work_cfbskzb7hzha5apjddr27rkukm 136 16 of of IN work_cfbskzb7hzha5apjddr27rkukm 136 17 adaptation adaptation NN work_cfbskzb7hzha5apjddr27rkukm 136 18 to to IN work_cfbskzb7hzha5apjddr27rkukm 136 19 the the DT work_cfbskzb7hzha5apjddr27rkukm 136 20 host host NN work_cfbskzb7hzha5apjddr27rkukm 136 21 ’s ’s NN work_cfbskzb7hzha5apjddr27rkukm 136 22 immune immune JJ work_cfbskzb7hzha5apjddr27rkukm 136 23 response response NN work_cfbskzb7hzha5apjddr27rkukm 136 24 and and CC work_cfbskzb7hzha5apjddr27rkukm 136 25 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 136 26 selection selection NN work_cfbskzb7hzha5apjddr27rkukm 136 27 pressure pressure NN work_cfbskzb7hzha5apjddr27rkukm 136 28 . . . work_cfbskzb7hzha5apjddr27rkukm 137 1 Acknowledgements acknowledgement NNS work_cfbskzb7hzha5apjddr27rkukm 137 2 We -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 137 3 thank thank VBP work_cfbskzb7hzha5apjddr27rkukm 137 4 the the DT work_cfbskzb7hzha5apjddr27rkukm 137 5 mycobacteriology mycobacteriology NN work_cfbskzb7hzha5apjddr27rkukm 137 6 laboratories laboratory NNS work_cfbskzb7hzha5apjddr27rkukm 137 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 137 8 Mennonite Mennonite NNP work_cfbskzb7hzha5apjddr27rkukm 137 9 Christian Christian NNP work_cfbskzb7hzha5apjddr27rkukm 137 10 Hospital Hospital NNP work_cfbskzb7hzha5apjddr27rkukm 137 11 , , , work_cfbskzb7hzha5apjddr27rkukm 137 12 Tri Tri NNP work_cfbskzb7hzha5apjddr27rkukm 137 13 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 137 14 Service Service NNP work_cfbskzb7hzha5apjddr27rkukm 137 15 General General NNP work_cfbskzb7hzha5apjddr27rkukm 137 16 Hospital Hospital NNP work_cfbskzb7hzha5apjddr27rkukm 137 17 , , , work_cfbskzb7hzha5apjddr27rkukm 137 18 Tainan Tainan NNP work_cfbskzb7hzha5apjddr27rkukm 137 19 Chest Chest NNP work_cfbskzb7hzha5apjddr27rkukm 137 20 Hospital Hospital NNP work_cfbskzb7hzha5apjddr27rkukm 137 21 , , , work_cfbskzb7hzha5apjddr27rkukm 137 22 Wan Wan NNP work_cfbskzb7hzha5apjddr27rkukm 137 23 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 137 24 Ciao Ciao NNP work_cfbskzb7hzha5apjddr27rkukm 137 25 Veterans Veterans NNPS work_cfbskzb7hzha5apjddr27rkukm 137 26 Hospital Hospital NNP work_cfbskzb7hzha5apjddr27rkukm 137 27 and and CC work_cfbskzb7hzha5apjddr27rkukm 137 28 Kaohsiung Kaohsiung NNP work_cfbskzb7hzha5apjddr27rkukm 137 29 Veterans Veterans NNP work_cfbskzb7hzha5apjddr27rkukm 137 30 General General NNP work_cfbskzb7hzha5apjddr27rkukm 137 31 Hospital Hospital NNP work_cfbskzb7hzha5apjddr27rkukm 137 32 for for IN work_cfbskzb7hzha5apjddr27rkukm 137 33 providing provide VBG work_cfbskzb7hzha5apjddr27rkukm 137 34 bacterial bacterial JJ work_cfbskzb7hzha5apjddr27rkukm 137 35 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 137 36 . . . work_cfbskzb7hzha5apjddr27rkukm 138 1 We -PRON- PRP work_cfbskzb7hzha5apjddr27rkukm 138 2 also also RB work_cfbskzb7hzha5apjddr27rkukm 138 3 thank thank VBP work_cfbskzb7hzha5apjddr27rkukm 138 4 Dr Dr NNP work_cfbskzb7hzha5apjddr27rkukm 138 5 Daryl Daryl NNP work_cfbskzb7hzha5apjddr27rkukm 138 6 Henderson Henderson NNP work_cfbskzb7hzha5apjddr27rkukm 138 7 for for IN work_cfbskzb7hzha5apjddr27rkukm 138 8 his -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 138 9 kind kind NN work_cfbskzb7hzha5apjddr27rkukm 138 10 help help NN work_cfbskzb7hzha5apjddr27rkukm 138 11 in in IN work_cfbskzb7hzha5apjddr27rkukm 138 12 improving improve VBG work_cfbskzb7hzha5apjddr27rkukm 138 13 the the DT work_cfbskzb7hzha5apjddr27rkukm 138 14 English English NNP work_cfbskzb7hzha5apjddr27rkukm 138 15 of of IN work_cfbskzb7hzha5apjddr27rkukm 138 16 this this DT work_cfbskzb7hzha5apjddr27rkukm 138 17 manuscript manuscript NN work_cfbskzb7hzha5apjddr27rkukm 138 18 . . . work_cfbskzb7hzha5apjddr27rkukm 139 1 All all DT work_cfbskzb7hzha5apjddr27rkukm 139 2 participants participant NNS work_cfbskzb7hzha5apjddr27rkukm 139 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 139 4 this this DT work_cfbskzb7hzha5apjddr27rkukm 139 5 consortium consortium NN work_cfbskzb7hzha5apjddr27rkukm 139 6 are be VBP work_cfbskzb7hzha5apjddr27rkukm 139 7 acknowledged acknowledge VBN work_cfbskzb7hzha5apjddr27rkukm 139 8 for for IN work_cfbskzb7hzha5apjddr27rkukm 139 9 valuable valuable JJ work_cfbskzb7hzha5apjddr27rkukm 139 10 discussions discussion NNS work_cfbskzb7hzha5apjddr27rkukm 139 11 . . . work_cfbskzb7hzha5apjddr27rkukm 140 1 Transparency Transparency NNP work_cfbskzb7hzha5apjddr27rkukm 140 2 Declaration Declaration NNP work_cfbskzb7hzha5apjddr27rkukm 140 3 This this DT work_cfbskzb7hzha5apjddr27rkukm 140 4 project project NN work_cfbskzb7hzha5apjddr27rkukm 140 5 was be VBD work_cfbskzb7hzha5apjddr27rkukm 140 6 supported support VBN work_cfbskzb7hzha5apjddr27rkukm 140 7 by by IN work_cfbskzb7hzha5apjddr27rkukm 140 8 grants grant NNS work_cfbskzb7hzha5apjddr27rkukm 140 9 from from IN work_cfbskzb7hzha5apjddr27rkukm 140 10 the the DT work_cfbskzb7hzha5apjddr27rkukm 140 11 National National NNP work_cfbskzb7hzha5apjddr27rkukm 140 12 Health Health NNP work_cfbskzb7hzha5apjddr27rkukm 140 13 Research Research NNP work_cfbskzb7hzha5apjddr27rkukm 140 14 Institutes Institutes NNP work_cfbskzb7hzha5apjddr27rkukm 140 15 and and CC work_cfbskzb7hzha5apjddr27rkukm 140 16 National National NNP work_cfbskzb7hzha5apjddr27rkukm 140 17 Science Science NNP work_cfbskzb7hzha5apjddr27rkukm 140 18 Council Council NNP work_cfbskzb7hzha5apjddr27rkukm 140 19 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 140 20 NSC97 NSC97 NNP work_cfbskzb7hzha5apjddr27rkukm 140 21 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 140 22 3112-B-400 3112-b-400 CD work_cfbskzb7hzha5apjddr27rkukm 140 23 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 140 24 012 012 CD work_cfbskzb7hzha5apjddr27rkukm 140 25 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 140 26 , , , work_cfbskzb7hzha5apjddr27rkukm 140 27 Taiwan Taiwan NNP work_cfbskzb7hzha5apjddr27rkukm 140 28 . . . work_cfbskzb7hzha5apjddr27rkukm 141 1 Other other JJ work_cfbskzb7hzha5apjddr27rkukm 141 2 authors author NNS work_cfbskzb7hzha5apjddr27rkukm 141 3 had have VBD work_cfbskzb7hzha5apjddr27rkukm 141 4 no no DT work_cfbskzb7hzha5apjddr27rkukm 141 5 conflicts conflict NNS work_cfbskzb7hzha5apjddr27rkukm 141 6 of of IN work_cfbskzb7hzha5apjddr27rkukm 141 7 interest interest NN work_cfbskzb7hzha5apjddr27rkukm 141 8 . . . work_cfbskzb7hzha5apjddr27rkukm 142 1 References reference NNS work_cfbskzb7hzha5apjddr27rkukm 142 2 1 1 CD work_cfbskzb7hzha5apjddr27rkukm 142 3 . . . work_cfbskzb7hzha5apjddr27rkukm 143 1 Chen Chen NNP work_cfbskzb7hzha5apjddr27rkukm 143 2 ZC ZC NNP work_cfbskzb7hzha5apjddr27rkukm 143 3 . . . work_cfbskzb7hzha5apjddr27rkukm 144 1 Tuberculosis tuberculosis JJ work_cfbskzb7hzha5apjddr27rkukm 144 2 annual annual JJ work_cfbskzb7hzha5apjddr27rkukm 144 3 report report NN work_cfbskzb7hzha5apjddr27rkukm 144 4 . . . work_cfbskzb7hzha5apjddr27rkukm 145 1 Center Center NNP work_cfbskzb7hzha5apjddr27rkukm 145 2 for for IN work_cfbskzb7hzha5apjddr27rkukm 145 3 Disease Disease NNP work_cfbskzb7hzha5apjddr27rkukm 145 4 Control Control NNP work_cfbskzb7hzha5apjddr27rkukm 145 5 DoH DoH NNP work_cfbskzb7hzha5apjddr27rkukm 145 6 , , , work_cfbskzb7hzha5apjddr27rkukm 145 7 2002 2002 CD work_cfbskzb7hzha5apjddr27rkukm 145 8 ; ; : work_cfbskzb7hzha5apjddr27rkukm 145 9 34–39 34–39 LS work_cfbskzb7hzha5apjddr27rkukm 145 10 . . . work_cfbskzb7hzha5apjddr27rkukm 146 1 2 2 LS work_cfbskzb7hzha5apjddr27rkukm 146 2 . . . work_cfbskzb7hzha5apjddr27rkukm 147 1 Bifani Bifani NNP work_cfbskzb7hzha5apjddr27rkukm 147 2 PJ PJ NNP work_cfbskzb7hzha5apjddr27rkukm 147 3 , , , work_cfbskzb7hzha5apjddr27rkukm 147 4 Mathema Mathema NNP work_cfbskzb7hzha5apjddr27rkukm 147 5 B B NNP work_cfbskzb7hzha5apjddr27rkukm 147 6 , , , work_cfbskzb7hzha5apjddr27rkukm 147 7 Kurepina Kurepina NNP work_cfbskzb7hzha5apjddr27rkukm 147 8 NE NE NNP work_cfbskzb7hzha5apjddr27rkukm 147 9 et et NNP work_cfbskzb7hzha5apjddr27rkukm 147 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 147 11 . . . work_cfbskzb7hzha5apjddr27rkukm 148 1 Global global JJ work_cfbskzb7hzha5apjddr27rkukm 148 2 dissemination dissemination NN work_cfbskzb7hzha5apjddr27rkukm 148 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 148 4 the the DT work_cfbskzb7hzha5apjddr27rkukm 148 5 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 148 6 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 148 7 W W NNP work_cfbskzb7hzha5apjddr27rkukm 148 8 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 148 9 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 148 10 family family NN work_cfbskzb7hzha5apjddr27rkukm 148 11 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 148 12 . . . work_cfbskzb7hzha5apjddr27rkukm 149 1 Trends Trends NNPS work_cfbskzb7hzha5apjddr27rkukm 149 2 Microbiol Microbiol NNP work_cfbskzb7hzha5apjddr27rkukm 149 3 2002 2002 CD work_cfbskzb7hzha5apjddr27rkukm 149 4 ; ; : work_cfbskzb7hzha5apjddr27rkukm 149 5 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 149 6 : : SYM work_cfbskzb7hzha5apjddr27rkukm 149 7 45–52 45–52 CD work_cfbskzb7hzha5apjddr27rkukm 149 8 . . . work_cfbskzb7hzha5apjddr27rkukm 150 1 3 3 LS work_cfbskzb7hzha5apjddr27rkukm 150 2 . . . work_cfbskzb7hzha5apjddr27rkukm 151 1 Brudey Brudey NNP work_cfbskzb7hzha5apjddr27rkukm 151 2 K K NNP work_cfbskzb7hzha5apjddr27rkukm 151 3 , , , work_cfbskzb7hzha5apjddr27rkukm 151 4 Driscoll Driscoll NNP work_cfbskzb7hzha5apjddr27rkukm 151 5 JR JR NNP work_cfbskzb7hzha5apjddr27rkukm 151 6 , , , work_cfbskzb7hzha5apjddr27rkukm 151 7 Rigouts Rigouts NNP work_cfbskzb7hzha5apjddr27rkukm 151 8 L L NNP work_cfbskzb7hzha5apjddr27rkukm 151 9 et et NNP work_cfbskzb7hzha5apjddr27rkukm 151 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 151 11 . . . work_cfbskzb7hzha5apjddr27rkukm 152 1 Mycobacterium mycobacterium JJ work_cfbskzb7hzha5apjddr27rkukm 152 2 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 152 3 com- com- NN work_cfbskzb7hzha5apjddr27rkukm 152 4 plex plex NN work_cfbskzb7hzha5apjddr27rkukm 152 5 genetic genetic JJ work_cfbskzb7hzha5apjddr27rkukm 152 6 diversity diversity NN work_cfbskzb7hzha5apjddr27rkukm 152 7 : : : work_cfbskzb7hzha5apjddr27rkukm 152 8 mining mine VBG work_cfbskzb7hzha5apjddr27rkukm 152 9 the the DT work_cfbskzb7hzha5apjddr27rkukm 152 10 fourth fourth JJ work_cfbskzb7hzha5apjddr27rkukm 152 11 international international NNP work_cfbskzb7hzha5apjddr27rkukm 152 12 spoligotyping spoligotyping NNP work_cfbskzb7hzha5apjddr27rkukm 152 13 database database NNP work_cfbskzb7hzha5apjddr27rkukm 152 14 ( ( -LRB- work_cfbskzb7hzha5apjddr27rkukm 152 15 spolDB4 spolDB4 NNP work_cfbskzb7hzha5apjddr27rkukm 152 16 ) ) -RRB- work_cfbskzb7hzha5apjddr27rkukm 152 17 for for IN work_cfbskzb7hzha5apjddr27rkukm 152 18 classification classification NN work_cfbskzb7hzha5apjddr27rkukm 152 19 , , , work_cfbskzb7hzha5apjddr27rkukm 152 20 population population NN work_cfbskzb7hzha5apjddr27rkukm 152 21 genetics genetic NNS work_cfbskzb7hzha5apjddr27rkukm 152 22 and and CC work_cfbskzb7hzha5apjddr27rkukm 152 23 epide- epide- NN work_cfbskzb7hzha5apjddr27rkukm 152 24 miology miology NN work_cfbskzb7hzha5apjddr27rkukm 152 25 . . . work_cfbskzb7hzha5apjddr27rkukm 153 1 BMC BMC NNP work_cfbskzb7hzha5apjddr27rkukm 153 2 Microbiol Microbiol NNP work_cfbskzb7hzha5apjddr27rkukm 153 3 2006 2006 CD work_cfbskzb7hzha5apjddr27rkukm 153 4 ; ; : work_cfbskzb7hzha5apjddr27rkukm 153 5 6 6 CD work_cfbskzb7hzha5apjddr27rkukm 153 6 : : SYM work_cfbskzb7hzha5apjddr27rkukm 153 7 23 23 CD work_cfbskzb7hzha5apjddr27rkukm 153 8 . . . work_cfbskzb7hzha5apjddr27rkukm 154 1 4 4 LS work_cfbskzb7hzha5apjddr27rkukm 154 2 . . . work_cfbskzb7hzha5apjddr27rkukm 155 1 Glynn Glynn NNP work_cfbskzb7hzha5apjddr27rkukm 155 2 JR JR NNP work_cfbskzb7hzha5apjddr27rkukm 155 3 , , , work_cfbskzb7hzha5apjddr27rkukm 155 4 Whiteley Whiteley NNP work_cfbskzb7hzha5apjddr27rkukm 155 5 J J NNP work_cfbskzb7hzha5apjddr27rkukm 155 6 , , , work_cfbskzb7hzha5apjddr27rkukm 155 7 Bifani Bifani NNP work_cfbskzb7hzha5apjddr27rkukm 155 8 PJ PJ NNP work_cfbskzb7hzha5apjddr27rkukm 155 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 155 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 155 11 . . . work_cfbskzb7hzha5apjddr27rkukm 156 1 Worldwide worldwide JJ work_cfbskzb7hzha5apjddr27rkukm 156 2 occurrence occurrence NN work_cfbskzb7hzha5apjddr27rkukm 156 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 156 4 Beij- Beij- NNP work_cfbskzb7hzha5apjddr27rkukm 156 5 ing ing NNP work_cfbskzb7hzha5apjddr27rkukm 156 6 / / SYM work_cfbskzb7hzha5apjddr27rkukm 156 7 W w NN work_cfbskzb7hzha5apjddr27rkukm 156 8 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 156 9 of of IN work_cfbskzb7hzha5apjddr27rkukm 156 10 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 156 11 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 156 12 : : : work_cfbskzb7hzha5apjddr27rkukm 156 13 a a DT work_cfbskzb7hzha5apjddr27rkukm 156 14 systematic systematic JJ work_cfbskzb7hzha5apjddr27rkukm 156 15 review review NN work_cfbskzb7hzha5apjddr27rkukm 156 16 . . . work_cfbskzb7hzha5apjddr27rkukm 157 1 Emerg Emerg NNP work_cfbskzb7hzha5apjddr27rkukm 157 2 Infect Infect NNP work_cfbskzb7hzha5apjddr27rkukm 157 3 Dis Dis NNP work_cfbskzb7hzha5apjddr27rkukm 157 4 2002 2002 CD work_cfbskzb7hzha5apjddr27rkukm 157 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 157 6 8 8 CD work_cfbskzb7hzha5apjddr27rkukm 157 7 : : : work_cfbskzb7hzha5apjddr27rkukm 157 8 843–849 843–849 CD work_cfbskzb7hzha5apjddr27rkukm 157 9 . . . work_cfbskzb7hzha5apjddr27rkukm 158 1 5 5 CD work_cfbskzb7hzha5apjddr27rkukm 158 2 . . . work_cfbskzb7hzha5apjddr27rkukm 159 1 Filliol Filliol NNP work_cfbskzb7hzha5apjddr27rkukm 159 2 I I NNP work_cfbskzb7hzha5apjddr27rkukm 159 3 , , , work_cfbskzb7hzha5apjddr27rkukm 159 4 Driscoll Driscoll NNP work_cfbskzb7hzha5apjddr27rkukm 159 5 JR JR NNP work_cfbskzb7hzha5apjddr27rkukm 159 6 , , , work_cfbskzb7hzha5apjddr27rkukm 159 7 van van NNP work_cfbskzb7hzha5apjddr27rkukm 159 8 Soolingen Soolingen NNP work_cfbskzb7hzha5apjddr27rkukm 159 9 D D NNP work_cfbskzb7hzha5apjddr27rkukm 159 10 et et FW work_cfbskzb7hzha5apjddr27rkukm 159 11 al al NNP work_cfbskzb7hzha5apjddr27rkukm 159 12 . . . work_cfbskzb7hzha5apjddr27rkukm 160 1 Snapshot snapshot NN work_cfbskzb7hzha5apjddr27rkukm 160 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 160 3 moving move VBG work_cfbskzb7hzha5apjddr27rkukm 160 4 and and CC work_cfbskzb7hzha5apjddr27rkukm 160 5 expanding expand VBG work_cfbskzb7hzha5apjddr27rkukm 160 6 clones clone NNS work_cfbskzb7hzha5apjddr27rkukm 160 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 160 8 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 160 9 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 160 10 and and CC work_cfbskzb7hzha5apjddr27rkukm 160 11 their -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 160 12 global global JJ work_cfbskzb7hzha5apjddr27rkukm 160 13 distri- distri- NN work_cfbskzb7hzha5apjddr27rkukm 160 14 bution bution NN work_cfbskzb7hzha5apjddr27rkukm 160 15 assessed assess VBN work_cfbskzb7hzha5apjddr27rkukm 160 16 by by IN work_cfbskzb7hzha5apjddr27rkukm 160 17 spoligotyping spoligotype VBG work_cfbskzb7hzha5apjddr27rkukm 160 18 in in IN work_cfbskzb7hzha5apjddr27rkukm 160 19 an an DT work_cfbskzb7hzha5apjddr27rkukm 160 20 international international JJ work_cfbskzb7hzha5apjddr27rkukm 160 21 study study NN work_cfbskzb7hzha5apjddr27rkukm 160 22 . . . work_cfbskzb7hzha5apjddr27rkukm 161 1 J J NNP work_cfbskzb7hzha5apjddr27rkukm 161 2 Clin Clin NNP work_cfbskzb7hzha5apjddr27rkukm 161 3 Micro- Micro- NNP work_cfbskzb7hzha5apjddr27rkukm 161 4 biol biol NN work_cfbskzb7hzha5apjddr27rkukm 161 5 2003 2003 CD work_cfbskzb7hzha5apjddr27rkukm 161 6 ; ; : work_cfbskzb7hzha5apjddr27rkukm 161 7 41 41 CD work_cfbskzb7hzha5apjddr27rkukm 161 8 : : SYM work_cfbskzb7hzha5apjddr27rkukm 161 9 963–970 963–970 CD work_cfbskzb7hzha5apjddr27rkukm 161 10 . . . work_cfbskzb7hzha5apjddr27rkukm 162 1 6 6 CD work_cfbskzb7hzha5apjddr27rkukm 162 2 . . . work_cfbskzb7hzha5apjddr27rkukm 163 1 Drobniewski Drobniewski NNP work_cfbskzb7hzha5apjddr27rkukm 163 2 F F NNP work_cfbskzb7hzha5apjddr27rkukm 163 3 , , , work_cfbskzb7hzha5apjddr27rkukm 163 4 Balabanova Balabanova NNP work_cfbskzb7hzha5apjddr27rkukm 163 5 Y Y NNP work_cfbskzb7hzha5apjddr27rkukm 163 6 , , , work_cfbskzb7hzha5apjddr27rkukm 163 7 Nikolayevsky Nikolayevsky NNP work_cfbskzb7hzha5apjddr27rkukm 163 8 V V NNP work_cfbskzb7hzha5apjddr27rkukm 163 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 163 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 163 11 . . . work_cfbskzb7hzha5apjddr27rkukm 164 1 Drug drug NN work_cfbskzb7hzha5apjddr27rkukm 164 2 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 164 3 resistant resistant JJ work_cfbskzb7hzha5apjddr27rkukm 164 4 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 164 5 , , , work_cfbskzb7hzha5apjddr27rkukm 164 6 clinical clinical JJ work_cfbskzb7hzha5apjddr27rkukm 164 7 virulence virulence NN work_cfbskzb7hzha5apjddr27rkukm 164 8 , , , work_cfbskzb7hzha5apjddr27rkukm 164 9 and and CC work_cfbskzb7hzha5apjddr27rkukm 164 10 the the DT work_cfbskzb7hzha5apjddr27rkukm 164 11 dominance dominance NN work_cfbskzb7hzha5apjddr27rkukm 164 12 of of IN work_cfbskzb7hzha5apjddr27rkukm 164 13 the the DT work_cfbskzb7hzha5apjddr27rkukm 164 14 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 164 15 strain strain VBP work_cfbskzb7hzha5apjddr27rkukm 164 16 family family NN work_cfbskzb7hzha5apjddr27rkukm 164 17 in in IN work_cfbskzb7hzha5apjddr27rkukm 164 18 Russia Russia NNP work_cfbskzb7hzha5apjddr27rkukm 164 19 . . . work_cfbskzb7hzha5apjddr27rkukm 165 1 JAMA JAMA NNP work_cfbskzb7hzha5apjddr27rkukm 165 2 2005 2005 CD work_cfbskzb7hzha5apjddr27rkukm 165 3 ; ; : work_cfbskzb7hzha5apjddr27rkukm 165 4 293 293 CD work_cfbskzb7hzha5apjddr27rkukm 165 5 : : SYM work_cfbskzb7hzha5apjddr27rkukm 165 6 2726–2731 2726–2731 CD work_cfbskzb7hzha5apjddr27rkukm 165 7 . . . work_cfbskzb7hzha5apjddr27rkukm 166 1 7 7 LS work_cfbskzb7hzha5apjddr27rkukm 166 2 . . . work_cfbskzb7hzha5apjddr27rkukm 167 1 Kurepina Kurepina NNP work_cfbskzb7hzha5apjddr27rkukm 167 2 NE NE NNP work_cfbskzb7hzha5apjddr27rkukm 167 3 , , , work_cfbskzb7hzha5apjddr27rkukm 167 4 Sreevatsan Sreevatsan NNP work_cfbskzb7hzha5apjddr27rkukm 167 5 S S NNP work_cfbskzb7hzha5apjddr27rkukm 167 6 , , , work_cfbskzb7hzha5apjddr27rkukm 167 7 Plikaytis Plikaytis NNP work_cfbskzb7hzha5apjddr27rkukm 167 8 BB BB NNP work_cfbskzb7hzha5apjddr27rkukm 167 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 167 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 167 11 . . . work_cfbskzb7hzha5apjddr27rkukm 168 1 Characterization characterization NN work_cfbskzb7hzha5apjddr27rkukm 168 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 168 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 168 4 phylogenetic phylogenetic JJ work_cfbskzb7hzha5apjddr27rkukm 168 5 distribution distribution NN work_cfbskzb7hzha5apjddr27rkukm 168 6 and and CC work_cfbskzb7hzha5apjddr27rkukm 168 7 chromosomal chromosomal NN work_cfbskzb7hzha5apjddr27rkukm 168 8 insertion insertion NN work_cfbskzb7hzha5apjddr27rkukm 168 9 sites site NNS work_cfbskzb7hzha5apjddr27rkukm 168 10 of of IN work_cfbskzb7hzha5apjddr27rkukm 168 11 five five CD work_cfbskzb7hzha5apjddr27rkukm 168 12 IS6110 is6110 NN work_cfbskzb7hzha5apjddr27rkukm 168 13 elements element NNS work_cfbskzb7hzha5apjddr27rkukm 168 14 in in IN work_cfbskzb7hzha5apjddr27rkukm 168 15 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 168 16 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 168 17 : : : work_cfbskzb7hzha5apjddr27rkukm 168 18 non non JJ work_cfbskzb7hzha5apjddr27rkukm 168 19 - - JJ work_cfbskzb7hzha5apjddr27rkukm 168 20 random random JJ work_cfbskzb7hzha5apjddr27rkukm 168 21 integra- integra- JJ work_cfbskzb7hzha5apjddr27rkukm 168 22 tion tion NN work_cfbskzb7hzha5apjddr27rkukm 168 23 in in IN work_cfbskzb7hzha5apjddr27rkukm 168 24 the the DT work_cfbskzb7hzha5apjddr27rkukm 168 25 dnaA dnaa CD work_cfbskzb7hzha5apjddr27rkukm 168 26 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 168 27 dnaN dnan CD work_cfbskzb7hzha5apjddr27rkukm 168 28 region region NN work_cfbskzb7hzha5apjddr27rkukm 168 29 . . . work_cfbskzb7hzha5apjddr27rkukm 169 1 Tuber Tuber NNP work_cfbskzb7hzha5apjddr27rkukm 169 2 Lung Lung NNP work_cfbskzb7hzha5apjddr27rkukm 169 3 Dis Dis NNP work_cfbskzb7hzha5apjddr27rkukm 169 4 1998 1998 CD work_cfbskzb7hzha5apjddr27rkukm 169 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 169 6 79 79 CD work_cfbskzb7hzha5apjddr27rkukm 169 7 : : : work_cfbskzb7hzha5apjddr27rkukm 169 8 31–42 31–42 CD work_cfbskzb7hzha5apjddr27rkukm 169 9 . . . work_cfbskzb7hzha5apjddr27rkukm 170 1 8 8 LS work_cfbskzb7hzha5apjddr27rkukm 170 2 . . . work_cfbskzb7hzha5apjddr27rkukm 171 1 Mokrousov Mokrousov NNP work_cfbskzb7hzha5apjddr27rkukm 171 2 I I NNP work_cfbskzb7hzha5apjddr27rkukm 171 3 , , , work_cfbskzb7hzha5apjddr27rkukm 171 4 Jiao Jiao NNP work_cfbskzb7hzha5apjddr27rkukm 171 5 WW WW NNP work_cfbskzb7hzha5apjddr27rkukm 171 6 , , , work_cfbskzb7hzha5apjddr27rkukm 171 7 Valcheva Valcheva NNP work_cfbskzb7hzha5apjddr27rkukm 171 8 V V NNP work_cfbskzb7hzha5apjddr27rkukm 171 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 171 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 171 11 . . . work_cfbskzb7hzha5apjddr27rkukm 172 1 Rapid rapid JJ work_cfbskzb7hzha5apjddr27rkukm 172 2 detection detection NN work_cfbskzb7hzha5apjddr27rkukm 172 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 172 4 the the DT work_cfbskzb7hzha5apjddr27rkukm 172 5 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 172 6 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 172 7 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 172 8 genotype genotype NN work_cfbskzb7hzha5apjddr27rkukm 172 9 and and CC work_cfbskzb7hzha5apjddr27rkukm 172 10 its -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 172 11 ancient ancient JJ work_cfbskzb7hzha5apjddr27rkukm 172 12 and and CC work_cfbskzb7hzha5apjddr27rkukm 172 13 CMI CMI NNP work_cfbskzb7hzha5apjddr27rkukm 172 14 Chang Chang NNP work_cfbskzb7hzha5apjddr27rkukm 172 15 et et FW work_cfbskzb7hzha5apjddr27rkukm 172 16 al al NNP work_cfbskzb7hzha5apjddr27rkukm 172 17 . . . work_cfbskzb7hzha5apjddr27rkukm 173 1 Genotypic genotypic JJ work_cfbskzb7hzha5apjddr27rkukm 173 2 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 173 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 173 4 the the DT work_cfbskzb7hzha5apjddr27rkukm 173 5 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 173 6 lineage lineage NN work_cfbskzb7hzha5apjddr27rkukm 173 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 173 8 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 173 9 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 173 10 1395 1395 CD work_cfbskzb7hzha5apjddr27rkukm 173 11 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 173 12 The the DT work_cfbskzb7hzha5apjddr27rkukm 173 13 Authors Authors NNPS work_cfbskzb7hzha5apjddr27rkukm 173 14 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 173 15 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 173 16 and and CC work_cfbskzb7hzha5apjddr27rkukm 173 17 Infection Infection NNP work_cfbskzb7hzha5apjddr27rkukm 173 18 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 173 19 European European NNP work_cfbskzb7hzha5apjddr27rkukm 173 20 Society Society NNP work_cfbskzb7hzha5apjddr27rkukm 173 21 of of IN work_cfbskzb7hzha5apjddr27rkukm 173 22 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 173 23 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 173 24 and and CC work_cfbskzb7hzha5apjddr27rkukm 173 25 Infectious Infectious NNP work_cfbskzb7hzha5apjddr27rkukm 173 26 Diseases Diseases NNPS work_cfbskzb7hzha5apjddr27rkukm 173 27 , , , work_cfbskzb7hzha5apjddr27rkukm 173 28 CMI CMI NNP work_cfbskzb7hzha5apjddr27rkukm 173 29 , , , work_cfbskzb7hzha5apjddr27rkukm 173 30 17 17 CD work_cfbskzb7hzha5apjddr27rkukm 173 31 , , , work_cfbskzb7hzha5apjddr27rkukm 173 32 1391–1396 1391–1396 CD work_cfbskzb7hzha5apjddr27rkukm 173 33 modern modern JJ work_cfbskzb7hzha5apjddr27rkukm 173 34 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 173 35 by by IN work_cfbskzb7hzha5apjddr27rkukm 173 36 IS6110-based is6110-based JJ work_cfbskzb7hzha5apjddr27rkukm 173 37 inverse inverse NN work_cfbskzb7hzha5apjddr27rkukm 173 38 PCR PCR NNP work_cfbskzb7hzha5apjddr27rkukm 173 39 . . . work_cfbskzb7hzha5apjddr27rkukm 174 1 J J NNP work_cfbskzb7hzha5apjddr27rkukm 174 2 Clin Clin NNP work_cfbskzb7hzha5apjddr27rkukm 174 3 Microbiol Microbiol NNP work_cfbskzb7hzha5apjddr27rkukm 174 4 2006 2006 CD work_cfbskzb7hzha5apjddr27rkukm 174 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 174 6 44 44 CD work_cfbskzb7hzha5apjddr27rkukm 174 7 : : SYM work_cfbskzb7hzha5apjddr27rkukm 174 8 2851–2856 2851–2856 CD work_cfbskzb7hzha5apjddr27rkukm 174 9 . . . work_cfbskzb7hzha5apjddr27rkukm 175 1 9 9 CD work_cfbskzb7hzha5apjddr27rkukm 175 2 . . . work_cfbskzb7hzha5apjddr27rkukm 176 1 Mokrousov Mokrousov NNP work_cfbskzb7hzha5apjddr27rkukm 176 2 I I NNP work_cfbskzb7hzha5apjddr27rkukm 176 3 , , , work_cfbskzb7hzha5apjddr27rkukm 176 4 Ly Ly NNP work_cfbskzb7hzha5apjddr27rkukm 176 5 HM HM NNP work_cfbskzb7hzha5apjddr27rkukm 176 6 , , , work_cfbskzb7hzha5apjddr27rkukm 176 7 Otten Otten NNP work_cfbskzb7hzha5apjddr27rkukm 176 8 T T NNP work_cfbskzb7hzha5apjddr27rkukm 176 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 176 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 176 11 . . . work_cfbskzb7hzha5apjddr27rkukm 177 1 Origin origin NN work_cfbskzb7hzha5apjddr27rkukm 177 2 and and CC work_cfbskzb7hzha5apjddr27rkukm 177 3 primary primary JJ work_cfbskzb7hzha5apjddr27rkukm 177 4 dispersal dispersal NN work_cfbskzb7hzha5apjddr27rkukm 177 5 of of IN work_cfbskzb7hzha5apjddr27rkukm 177 6 the the DT work_cfbskzb7hzha5apjddr27rkukm 177 7 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 177 8 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 177 9 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 177 10 genotype genotype NN work_cfbskzb7hzha5apjddr27rkukm 177 11 : : : work_cfbskzb7hzha5apjddr27rkukm 177 12 clues clue NNS work_cfbskzb7hzha5apjddr27rkukm 177 13 from from IN work_cfbskzb7hzha5apjddr27rkukm 177 14 human human JJ work_cfbskzb7hzha5apjddr27rkukm 177 15 phylogeography phylogeography NN work_cfbskzb7hzha5apjddr27rkukm 177 16 . . . work_cfbskzb7hzha5apjddr27rkukm 178 1 Genome genome JJ work_cfbskzb7hzha5apjddr27rkukm 178 2 Res Res NNP work_cfbskzb7hzha5apjddr27rkukm 178 3 2005 2005 CD work_cfbskzb7hzha5apjddr27rkukm 178 4 ; ; : work_cfbskzb7hzha5apjddr27rkukm 178 5 15 15 CD work_cfbskzb7hzha5apjddr27rkukm 178 6 : : SYM work_cfbskzb7hzha5apjddr27rkukm 178 7 1357–1364 1357–1364 CD work_cfbskzb7hzha5apjddr27rkukm 178 8 . . . work_cfbskzb7hzha5apjddr27rkukm 179 1 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 179 2 . . . work_cfbskzb7hzha5apjddr27rkukm 180 1 Ebrahimi Ebrahimi NNP work_cfbskzb7hzha5apjddr27rkukm 180 2 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 180 3 Rad Rad NNP work_cfbskzb7hzha5apjddr27rkukm 180 4 M M NNP work_cfbskzb7hzha5apjddr27rkukm 180 5 , , , work_cfbskzb7hzha5apjddr27rkukm 180 6 Bifani Bifani NNP work_cfbskzb7hzha5apjddr27rkukm 180 7 P P NNP work_cfbskzb7hzha5apjddr27rkukm 180 8 , , , work_cfbskzb7hzha5apjddr27rkukm 180 9 Martin Martin NNP work_cfbskzb7hzha5apjddr27rkukm 180 10 C C NNP work_cfbskzb7hzha5apjddr27rkukm 180 11 et et NNP work_cfbskzb7hzha5apjddr27rkukm 180 12 al al NNP work_cfbskzb7hzha5apjddr27rkukm 180 13 . . . work_cfbskzb7hzha5apjddr27rkukm 181 1 Mutations mutation NNS work_cfbskzb7hzha5apjddr27rkukm 181 2 in in IN work_cfbskzb7hzha5apjddr27rkukm 181 3 putative putative JJ work_cfbskzb7hzha5apjddr27rkukm 181 4 muta- muta- JJ work_cfbskzb7hzha5apjddr27rkukm 181 5 tor tor NN work_cfbskzb7hzha5apjddr27rkukm 181 6 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 181 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 181 8 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 181 9 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 181 10 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 181 11 of of IN work_cfbskzb7hzha5apjddr27rkukm 181 12 the the DT work_cfbskzb7hzha5apjddr27rkukm 181 13 W W NNP work_cfbskzb7hzha5apjddr27rkukm 181 14 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 181 15 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 181 16 family family NN work_cfbskzb7hzha5apjddr27rkukm 181 17 . . . work_cfbskzb7hzha5apjddr27rkukm 182 1 Emerg Emerg NNP work_cfbskzb7hzha5apjddr27rkukm 182 2 Infect Infect NNP work_cfbskzb7hzha5apjddr27rkukm 182 3 Dis Dis NNP work_cfbskzb7hzha5apjddr27rkukm 182 4 2003 2003 CD work_cfbskzb7hzha5apjddr27rkukm 182 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 182 6 9 9 CD work_cfbskzb7hzha5apjddr27rkukm 182 7 : : : work_cfbskzb7hzha5apjddr27rkukm 182 8 838–845 838–845 CD work_cfbskzb7hzha5apjddr27rkukm 182 9 . . . work_cfbskzb7hzha5apjddr27rkukm 183 1 11 11 CD work_cfbskzb7hzha5apjddr27rkukm 183 2 . . . work_cfbskzb7hzha5apjddr27rkukm 184 1 Hanekom Hanekom NNP work_cfbskzb7hzha5apjddr27rkukm 184 2 M M NNP work_cfbskzb7hzha5apjddr27rkukm 184 3 , , , work_cfbskzb7hzha5apjddr27rkukm 184 4 van van NNP work_cfbskzb7hzha5apjddr27rkukm 184 5 der der NNP work_cfbskzb7hzha5apjddr27rkukm 184 6 Spuy Spuy NNP work_cfbskzb7hzha5apjddr27rkukm 184 7 GD GD NNP work_cfbskzb7hzha5apjddr27rkukm 184 8 , , , work_cfbskzb7hzha5apjddr27rkukm 184 9 Gey Gey NNP work_cfbskzb7hzha5apjddr27rkukm 184 10 van van NNP work_cfbskzb7hzha5apjddr27rkukm 184 11 Pittius Pittius NNP work_cfbskzb7hzha5apjddr27rkukm 184 12 NC NC NNP work_cfbskzb7hzha5apjddr27rkukm 184 13 et et NNP work_cfbskzb7hzha5apjddr27rkukm 184 14 al al NNP work_cfbskzb7hzha5apjddr27rkukm 184 15 . . . work_cfbskzb7hzha5apjddr27rkukm 185 1 Evidence evidence NN work_cfbskzb7hzha5apjddr27rkukm 185 2 that that IN work_cfbskzb7hzha5apjddr27rkukm 185 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 185 4 spread spread NN work_cfbskzb7hzha5apjddr27rkukm 185 5 of of IN work_cfbskzb7hzha5apjddr27rkukm 185 6 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 185 7 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 185 8 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 185 9 with with IN work_cfbskzb7hzha5apjddr27rkukm 185 10 the the DT work_cfbskzb7hzha5apjddr27rkukm 185 11 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 185 12 genotype genotype NN work_cfbskzb7hzha5apjddr27rkukm 185 13 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 185 14 human human JJ work_cfbskzb7hzha5apjddr27rkukm 185 15 population population NN work_cfbskzb7hzha5apjddr27rkukm 185 16 dependent dependent JJ work_cfbskzb7hzha5apjddr27rkukm 185 17 . . . work_cfbskzb7hzha5apjddr27rkukm 186 1 J J NNP work_cfbskzb7hzha5apjddr27rkukm 186 2 Clin Clin NNP work_cfbskzb7hzha5apjddr27rkukm 186 3 Microbiol Microbiol NNP work_cfbskzb7hzha5apjddr27rkukm 186 4 2007 2007 CD work_cfbskzb7hzha5apjddr27rkukm 186 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 186 6 45 45 CD work_cfbskzb7hzha5apjddr27rkukm 186 7 : : SYM work_cfbskzb7hzha5apjddr27rkukm 186 8 2263–2266 2263–2266 CD work_cfbskzb7hzha5apjddr27rkukm 186 9 . . . work_cfbskzb7hzha5apjddr27rkukm 187 1 12 12 CD work_cfbskzb7hzha5apjddr27rkukm 187 2 . . . work_cfbskzb7hzha5apjddr27rkukm 188 1 Kremer Kremer NNP work_cfbskzb7hzha5apjddr27rkukm 188 2 K K NNP work_cfbskzb7hzha5apjddr27rkukm 188 3 , , , work_cfbskzb7hzha5apjddr27rkukm 188 4 van van NNP work_cfbskzb7hzha5apjddr27rkukm 188 5 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 188 6 der der NNP work_cfbskzb7hzha5apjddr27rkukm 188 7 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 188 8 Werf Werf NNP work_cfbskzb7hzha5apjddr27rkukm 188 9 MJ MJ NNP work_cfbskzb7hzha5apjddr27rkukm 188 10 , , , work_cfbskzb7hzha5apjddr27rkukm 188 11 Au Au NNP work_cfbskzb7hzha5apjddr27rkukm 188 12 BK BK NNP work_cfbskzb7hzha5apjddr27rkukm 188 13 et et FW work_cfbskzb7hzha5apjddr27rkukm 188 14 al al NNP work_cfbskzb7hzha5apjddr27rkukm 188 15 . . . work_cfbskzb7hzha5apjddr27rkukm 189 1 Vaccine vaccine NN work_cfbskzb7hzha5apjddr27rkukm 189 2 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 189 3 induced induce VBN work_cfbskzb7hzha5apjddr27rkukm 189 4 immunity immunity NN work_cfbskzb7hzha5apjddr27rkukm 189 5 circumvented circumvent VBN work_cfbskzb7hzha5apjddr27rkukm 189 6 by by IN work_cfbskzb7hzha5apjddr27rkukm 189 7 typical typical JJ work_cfbskzb7hzha5apjddr27rkukm 189 8 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 189 9 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 189 10 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 189 11 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 189 12 . . . work_cfbskzb7hzha5apjddr27rkukm 190 1 Emerg Emerg NNP work_cfbskzb7hzha5apjddr27rkukm 190 2 Infect Infect NNP work_cfbskzb7hzha5apjddr27rkukm 190 3 Dis Dis NNP work_cfbskzb7hzha5apjddr27rkukm 190 4 2009 2009 CD work_cfbskzb7hzha5apjddr27rkukm 190 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 190 6 15 15 CD work_cfbskzb7hzha5apjddr27rkukm 190 7 : : : work_cfbskzb7hzha5apjddr27rkukm 190 8 335–339 335–339 CD work_cfbskzb7hzha5apjddr27rkukm 190 9 . . . work_cfbskzb7hzha5apjddr27rkukm 191 1 13 13 CD work_cfbskzb7hzha5apjddr27rkukm 191 2 . . . work_cfbskzb7hzha5apjddr27rkukm 192 1 Mokrousov Mokrousov NNP work_cfbskzb7hzha5apjddr27rkukm 192 2 I I NNP work_cfbskzb7hzha5apjddr27rkukm 192 3 , , , work_cfbskzb7hzha5apjddr27rkukm 192 4 Jiao Jiao NNP work_cfbskzb7hzha5apjddr27rkukm 192 5 WW WW NNP work_cfbskzb7hzha5apjddr27rkukm 192 6 , , , work_cfbskzb7hzha5apjddr27rkukm 192 7 Sun Sun NNP work_cfbskzb7hzha5apjddr27rkukm 192 8 GZ GZ NNP work_cfbskzb7hzha5apjddr27rkukm 192 9 et et NNP work_cfbskzb7hzha5apjddr27rkukm 192 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 192 11 . . . work_cfbskzb7hzha5apjddr27rkukm 193 1 Evolution evolution NN work_cfbskzb7hzha5apjddr27rkukm 193 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 193 3 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 193 4 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 193 5 in in IN work_cfbskzb7hzha5apjddr27rkukm 193 6 different different JJ work_cfbskzb7hzha5apjddr27rkukm 193 7 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 193 8 of of IN work_cfbskzb7hzha5apjddr27rkukm 193 9 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 193 10 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 193 11 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 193 12 genotype genotype NN work_cfbskzb7hzha5apjddr27rkukm 193 13 . . . work_cfbskzb7hzha5apjddr27rkukm 194 1 Antimicrob Antimicrob NNP work_cfbskzb7hzha5apjddr27rkukm 194 2 Agents Agents NNP work_cfbskzb7hzha5apjddr27rkukm 194 3 Chemother Chemother NNP work_cfbskzb7hzha5apjddr27rkukm 194 4 2006 2006 CD work_cfbskzb7hzha5apjddr27rkukm 194 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 194 6 50 50 CD work_cfbskzb7hzha5apjddr27rkukm 194 7 : : : work_cfbskzb7hzha5apjddr27rkukm 194 8 2820–2823 2820–2823 CD work_cfbskzb7hzha5apjddr27rkukm 194 9 . . . work_cfbskzb7hzha5apjddr27rkukm 195 1 14 14 CD work_cfbskzb7hzha5apjddr27rkukm 195 2 . . . work_cfbskzb7hzha5apjddr27rkukm 196 1 Iwamoto Iwamoto NNP work_cfbskzb7hzha5apjddr27rkukm 196 2 T T NNP work_cfbskzb7hzha5apjddr27rkukm 196 3 , , , work_cfbskzb7hzha5apjddr27rkukm 196 4 Yoshida Yoshida NNP work_cfbskzb7hzha5apjddr27rkukm 196 5 S S NNP work_cfbskzb7hzha5apjddr27rkukm 196 6 , , , work_cfbskzb7hzha5apjddr27rkukm 196 7 Suzuki Suzuki NNP work_cfbskzb7hzha5apjddr27rkukm 196 8 K K NNP work_cfbskzb7hzha5apjddr27rkukm 196 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 196 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 196 11 . . . work_cfbskzb7hzha5apjddr27rkukm 197 1 Population population NN work_cfbskzb7hzha5apjddr27rkukm 197 2 structure structure NN work_cfbskzb7hzha5apjddr27rkukm 197 3 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 197 4 of of IN work_cfbskzb7hzha5apjddr27rkukm 197 5 the the DT work_cfbskzb7hzha5apjddr27rkukm 197 6 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 197 7 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 197 8 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 197 9 family family NN work_cfbskzb7hzha5apjddr27rkukm 197 10 indicates indicate VBZ work_cfbskzb7hzha5apjddr27rkukm 197 11 an an DT work_cfbskzb7hzha5apjddr27rkukm 197 12 association association NN work_cfbskzb7hzha5apjddr27rkukm 197 13 between between IN work_cfbskzb7hzha5apjddr27rkukm 197 14 certain certain JJ work_cfbskzb7hzha5apjddr27rkukm 197 15 sublineages sublineage NNS work_cfbskzb7hzha5apjddr27rkukm 197 16 and and CC work_cfbskzb7hzha5apjddr27rkukm 197 17 multidrug multidrug NN work_cfbskzb7hzha5apjddr27rkukm 197 18 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 197 19 . . . work_cfbskzb7hzha5apjddr27rkukm 198 1 Antimicrob Antimicrob NNP work_cfbskzb7hzha5apjddr27rkukm 198 2 Agents Agents NNP work_cfbskzb7hzha5apjddr27rkukm 198 3 Chemother Chemother NNP work_cfbskzb7hzha5apjddr27rkukm 198 4 2008 2008 CD work_cfbskzb7hzha5apjddr27rkukm 198 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 198 6 52 52 CD work_cfbskzb7hzha5apjddr27rkukm 198 7 : : SYM work_cfbskzb7hzha5apjddr27rkukm 198 8 3805–3809 3805–3809 CD work_cfbskzb7hzha5apjddr27rkukm 198 9 . . . work_cfbskzb7hzha5apjddr27rkukm 199 1 15 15 CD work_cfbskzb7hzha5apjddr27rkukm 199 2 . . . work_cfbskzb7hzha5apjddr27rkukm 200 1 Wada Wada NNP work_cfbskzb7hzha5apjddr27rkukm 200 2 T T NNP work_cfbskzb7hzha5apjddr27rkukm 200 3 , , , work_cfbskzb7hzha5apjddr27rkukm 200 4 Iwamoto Iwamoto NNP work_cfbskzb7hzha5apjddr27rkukm 200 5 T T NNP work_cfbskzb7hzha5apjddr27rkukm 200 6 , , , work_cfbskzb7hzha5apjddr27rkukm 200 7 Maeda Maeda NNP work_cfbskzb7hzha5apjddr27rkukm 200 8 S. S. NNP work_cfbskzb7hzha5apjddr27rkukm 200 9 Genetic Genetic NNP work_cfbskzb7hzha5apjddr27rkukm 200 10 diversity diversity NN work_cfbskzb7hzha5apjddr27rkukm 200 11 of of IN work_cfbskzb7hzha5apjddr27rkukm 200 12 the the DT work_cfbskzb7hzha5apjddr27rkukm 200 13 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 200 14 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 200 15 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 200 16 family family NN work_cfbskzb7hzha5apjddr27rkukm 200 17 in in IN work_cfbskzb7hzha5apjddr27rkukm 200 18 East East NNP work_cfbskzb7hzha5apjddr27rkukm 200 19 Asia Asia NNP work_cfbskzb7hzha5apjddr27rkukm 200 20 revealed reveal VBD work_cfbskzb7hzha5apjddr27rkukm 200 21 through through IN work_cfbskzb7hzha5apjddr27rkukm 200 22 refined refined JJ work_cfbskzb7hzha5apjddr27rkukm 200 23 popu- popu- NNP work_cfbskzb7hzha5apjddr27rkukm 200 24 lation lation NN work_cfbskzb7hzha5apjddr27rkukm 200 25 structure structure NN work_cfbskzb7hzha5apjddr27rkukm 200 26 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 200 27 . . . work_cfbskzb7hzha5apjddr27rkukm 201 1 FEMS FEMS NNP work_cfbskzb7hzha5apjddr27rkukm 201 2 Microbiol Microbiol NNP work_cfbskzb7hzha5apjddr27rkukm 201 3 Lett Lett NNP work_cfbskzb7hzha5apjddr27rkukm 201 4 2009 2009 CD work_cfbskzb7hzha5apjddr27rkukm 201 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 201 6 291 291 CD work_cfbskzb7hzha5apjddr27rkukm 201 7 : : : work_cfbskzb7hzha5apjddr27rkukm 201 8 35–43 35–43 NN work_cfbskzb7hzha5apjddr27rkukm 201 9 . . . work_cfbskzb7hzha5apjddr27rkukm 202 1 16 16 CD work_cfbskzb7hzha5apjddr27rkukm 202 2 . . . work_cfbskzb7hzha5apjddr27rkukm 203 1 Dou Dou NNP work_cfbskzb7hzha5apjddr27rkukm 203 2 HY HY NNP work_cfbskzb7hzha5apjddr27rkukm 203 3 , , , work_cfbskzb7hzha5apjddr27rkukm 203 4 Tseng Tseng NNP work_cfbskzb7hzha5apjddr27rkukm 203 5 FC FC NNP work_cfbskzb7hzha5apjddr27rkukm 203 6 , , , work_cfbskzb7hzha5apjddr27rkukm 203 7 Lin Lin NNP work_cfbskzb7hzha5apjddr27rkukm 203 8 CW CW NNP work_cfbskzb7hzha5apjddr27rkukm 203 9 et et NNP work_cfbskzb7hzha5apjddr27rkukm 203 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 203 11 . . . work_cfbskzb7hzha5apjddr27rkukm 204 1 Molecular molecular JJ work_cfbskzb7hzha5apjddr27rkukm 204 2 epidemiology epidemiology NN work_cfbskzb7hzha5apjddr27rkukm 204 3 and and CC work_cfbskzb7hzha5apjddr27rkukm 204 4 evolu- evolu- VBZ work_cfbskzb7hzha5apjddr27rkukm 204 5 tionary tionary JJ work_cfbskzb7hzha5apjddr27rkukm 204 6 genetics genetic NNS work_cfbskzb7hzha5apjddr27rkukm 204 7 of of IN work_cfbskzb7hzha5apjddr27rkukm 204 8 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 204 9 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 204 10 in in IN work_cfbskzb7hzha5apjddr27rkukm 204 11 Taipei Taipei NNP work_cfbskzb7hzha5apjddr27rkukm 204 12 . . . work_cfbskzb7hzha5apjddr27rkukm 205 1 BMC BMC NNP work_cfbskzb7hzha5apjddr27rkukm 205 2 Infect Infect NNP work_cfbskzb7hzha5apjddr27rkukm 205 3 Dis Dis NNP work_cfbskzb7hzha5apjddr27rkukm 205 4 2008 2008 CD work_cfbskzb7hzha5apjddr27rkukm 205 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 205 6 8 8 CD work_cfbskzb7hzha5apjddr27rkukm 205 7 : : SYM work_cfbskzb7hzha5apjddr27rkukm 205 8 170 170 CD work_cfbskzb7hzha5apjddr27rkukm 205 9 . . . work_cfbskzb7hzha5apjddr27rkukm 206 1 17 17 CD work_cfbskzb7hzha5apjddr27rkukm 206 2 . . . work_cfbskzb7hzha5apjddr27rkukm 207 1 Dou Dou NNP work_cfbskzb7hzha5apjddr27rkukm 207 2 HY HY NNP work_cfbskzb7hzha5apjddr27rkukm 207 3 , , , work_cfbskzb7hzha5apjddr27rkukm 207 4 Tseng Tseng NNP work_cfbskzb7hzha5apjddr27rkukm 207 5 FC FC NNP work_cfbskzb7hzha5apjddr27rkukm 207 6 , , , work_cfbskzb7hzha5apjddr27rkukm 207 7 Lu Lu NNP work_cfbskzb7hzha5apjddr27rkukm 207 8 JJ JJ NNP work_cfbskzb7hzha5apjddr27rkukm 207 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 207 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 207 11 . . . work_cfbskzb7hzha5apjddr27rkukm 208 1 Associations association NNS work_cfbskzb7hzha5apjddr27rkukm 208 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 208 3 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 208 4 tubercu- tubercu- NN work_cfbskzb7hzha5apjddr27rkukm 208 5 losis losis NN work_cfbskzb7hzha5apjddr27rkukm 208 6 genotypes genotype NNS work_cfbskzb7hzha5apjddr27rkukm 208 7 with with IN work_cfbskzb7hzha5apjddr27rkukm 208 8 different different JJ work_cfbskzb7hzha5apjddr27rkukm 208 9 ethnic ethnic JJ work_cfbskzb7hzha5apjddr27rkukm 208 10 and and CC work_cfbskzb7hzha5apjddr27rkukm 208 11 migratory migratory NN work_cfbskzb7hzha5apjddr27rkukm 208 12 populations population NNS work_cfbskzb7hzha5apjddr27rkukm 208 13 in in IN work_cfbskzb7hzha5apjddr27rkukm 208 14 Taiwan Taiwan NNP work_cfbskzb7hzha5apjddr27rkukm 208 15 . . . work_cfbskzb7hzha5apjddr27rkukm 209 1 Infect infect VB work_cfbskzb7hzha5apjddr27rkukm 209 2 Genet Genet NNP work_cfbskzb7hzha5apjddr27rkukm 209 3 Evol Evol NNP work_cfbskzb7hzha5apjddr27rkukm 209 4 2008 2008 CD work_cfbskzb7hzha5apjddr27rkukm 209 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 209 6 8 8 CD work_cfbskzb7hzha5apjddr27rkukm 209 7 : : : work_cfbskzb7hzha5apjddr27rkukm 209 8 323–330 323–330 CD work_cfbskzb7hzha5apjddr27rkukm 209 9 . . . work_cfbskzb7hzha5apjddr27rkukm 210 1 18 18 CD work_cfbskzb7hzha5apjddr27rkukm 210 2 . . . work_cfbskzb7hzha5apjddr27rkukm 211 1 Plikaytis Plikaytis NNP work_cfbskzb7hzha5apjddr27rkukm 211 2 BB BB NNP work_cfbskzb7hzha5apjddr27rkukm 211 3 , , , work_cfbskzb7hzha5apjddr27rkukm 211 4 Marden Marden NNP work_cfbskzb7hzha5apjddr27rkukm 211 5 JL JL NNP work_cfbskzb7hzha5apjddr27rkukm 211 6 , , , work_cfbskzb7hzha5apjddr27rkukm 211 7 Crawford Crawford NNP work_cfbskzb7hzha5apjddr27rkukm 211 8 JT JT NNP work_cfbskzb7hzha5apjddr27rkukm 211 9 et et NNP work_cfbskzb7hzha5apjddr27rkukm 211 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 211 11 . . . work_cfbskzb7hzha5apjddr27rkukm 212 1 Multiplex Multiplex NNP work_cfbskzb7hzha5apjddr27rkukm 212 2 PCR PCR NNP work_cfbskzb7hzha5apjddr27rkukm 212 3 assay assay NN work_cfbskzb7hzha5apjddr27rkukm 212 4 specific specific JJ work_cfbskzb7hzha5apjddr27rkukm 212 5 for for IN work_cfbskzb7hzha5apjddr27rkukm 212 6 the the DT work_cfbskzb7hzha5apjddr27rkukm 212 7 multidrug multidrug NN work_cfbskzb7hzha5apjddr27rkukm 212 8 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 212 9 resistant resistant JJ work_cfbskzb7hzha5apjddr27rkukm 212 10 strain strain NN work_cfbskzb7hzha5apjddr27rkukm 212 11 W W NNP work_cfbskzb7hzha5apjddr27rkukm 212 12 of of IN work_cfbskzb7hzha5apjddr27rkukm 212 13 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 212 14 tubercu- tubercu- NN work_cfbskzb7hzha5apjddr27rkukm 212 15 losis losis NN work_cfbskzb7hzha5apjddr27rkukm 212 16 . . . work_cfbskzb7hzha5apjddr27rkukm 213 1 J J NNP work_cfbskzb7hzha5apjddr27rkukm 213 2 Clin Clin NNP work_cfbskzb7hzha5apjddr27rkukm 213 3 Microbiol Microbiol NNP work_cfbskzb7hzha5apjddr27rkukm 213 4 1994 1994 CD work_cfbskzb7hzha5apjddr27rkukm 213 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 213 6 32 32 CD work_cfbskzb7hzha5apjddr27rkukm 213 7 : : SYM work_cfbskzb7hzha5apjddr27rkukm 213 8 1542–1546 1542–1546 CD work_cfbskzb7hzha5apjddr27rkukm 213 9 . . . work_cfbskzb7hzha5apjddr27rkukm 214 1 19 19 CD work_cfbskzb7hzha5apjddr27rkukm 214 2 . . . work_cfbskzb7hzha5apjddr27rkukm 215 1 Tsolaki Tsolaki NNP work_cfbskzb7hzha5apjddr27rkukm 215 2 AG AG NNP work_cfbskzb7hzha5apjddr27rkukm 215 3 , , , work_cfbskzb7hzha5apjddr27rkukm 215 4 Hirsh Hirsh NNP work_cfbskzb7hzha5apjddr27rkukm 215 5 AE AE NNP work_cfbskzb7hzha5apjddr27rkukm 215 6 , , , work_cfbskzb7hzha5apjddr27rkukm 215 7 DeRiemer DeRiemer NNP work_cfbskzb7hzha5apjddr27rkukm 215 8 K K NNP work_cfbskzb7hzha5apjddr27rkukm 215 9 et et NNP work_cfbskzb7hzha5apjddr27rkukm 215 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 215 11 . . . work_cfbskzb7hzha5apjddr27rkukm 216 1 Functional functional JJ work_cfbskzb7hzha5apjddr27rkukm 216 2 and and CC work_cfbskzb7hzha5apjddr27rkukm 216 3 evolutionary evolutionary JJ work_cfbskzb7hzha5apjddr27rkukm 216 4 genomics genomic NNS work_cfbskzb7hzha5apjddr27rkukm 216 5 of of IN work_cfbskzb7hzha5apjddr27rkukm 216 6 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 216 7 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 216 8 : : : work_cfbskzb7hzha5apjddr27rkukm 216 9 insights insight NNS work_cfbskzb7hzha5apjddr27rkukm 216 10 from from IN work_cfbskzb7hzha5apjddr27rkukm 216 11 genomic genomic JJ work_cfbskzb7hzha5apjddr27rkukm 216 12 dele- dele- NNP work_cfbskzb7hzha5apjddr27rkukm 216 13 tions tion NNS work_cfbskzb7hzha5apjddr27rkukm 216 14 in in IN work_cfbskzb7hzha5apjddr27rkukm 216 15 100 100 CD work_cfbskzb7hzha5apjddr27rkukm 216 16 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 216 17 . . . work_cfbskzb7hzha5apjddr27rkukm 217 1 Proc Proc NNP work_cfbskzb7hzha5apjddr27rkukm 217 2 Natl Natl NNP work_cfbskzb7hzha5apjddr27rkukm 217 3 Acad Acad NNP work_cfbskzb7hzha5apjddr27rkukm 217 4 Sci Sci NNP work_cfbskzb7hzha5apjddr27rkukm 217 5 U U NNP work_cfbskzb7hzha5apjddr27rkukm 217 6 S S NNP work_cfbskzb7hzha5apjddr27rkukm 217 7 A A NNP work_cfbskzb7hzha5apjddr27rkukm 217 8 2004 2004 CD work_cfbskzb7hzha5apjddr27rkukm 217 9 ; ; : work_cfbskzb7hzha5apjddr27rkukm 217 10 101 101 CD work_cfbskzb7hzha5apjddr27rkukm 217 11 : : SYM work_cfbskzb7hzha5apjddr27rkukm 217 12 4865–4870 4865–4870 CD work_cfbskzb7hzha5apjddr27rkukm 217 13 . . . work_cfbskzb7hzha5apjddr27rkukm 218 1 20 20 CD work_cfbskzb7hzha5apjddr27rkukm 218 2 . . . work_cfbskzb7hzha5apjddr27rkukm 219 1 Supply Supply NNP work_cfbskzb7hzha5apjddr27rkukm 219 2 P P NNP work_cfbskzb7hzha5apjddr27rkukm 219 3 , , , work_cfbskzb7hzha5apjddr27rkukm 219 4 Allix Allix NNP work_cfbskzb7hzha5apjddr27rkukm 219 5 C C NNP work_cfbskzb7hzha5apjddr27rkukm 219 6 , , , work_cfbskzb7hzha5apjddr27rkukm 219 7 Lesjean Lesjean NNP work_cfbskzb7hzha5apjddr27rkukm 219 8 S S NNP work_cfbskzb7hzha5apjddr27rkukm 219 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 219 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 219 11 . . . work_cfbskzb7hzha5apjddr27rkukm 220 1 Proposal proposal NN work_cfbskzb7hzha5apjddr27rkukm 220 2 for for IN work_cfbskzb7hzha5apjddr27rkukm 220 3 standardization standardization NN work_cfbskzb7hzha5apjddr27rkukm 220 4 of of IN work_cfbskzb7hzha5apjddr27rkukm 220 5 opti- opti- NNP work_cfbskzb7hzha5apjddr27rkukm 220 6 mized mized NNP work_cfbskzb7hzha5apjddr27rkukm 220 7 mycobacterial mycobacterial NNP work_cfbskzb7hzha5apjddr27rkukm 220 8 interspersed intersperse VBN work_cfbskzb7hzha5apjddr27rkukm 220 9 repetitive repetitive JJ work_cfbskzb7hzha5apjddr27rkukm 220 10 unit unit NN work_cfbskzb7hzha5apjddr27rkukm 220 11 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 220 12 variable variable JJ work_cfbskzb7hzha5apjddr27rkukm 220 13 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 220 14 number number NN work_cfbskzb7hzha5apjddr27rkukm 220 15 tandem tandem NN work_cfbskzb7hzha5apjddr27rkukm 220 16 repeat repeat NN work_cfbskzb7hzha5apjddr27rkukm 220 17 typing typing NN work_cfbskzb7hzha5apjddr27rkukm 220 18 of of IN work_cfbskzb7hzha5apjddr27rkukm 220 19 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 220 20 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 220 21 . . . work_cfbskzb7hzha5apjddr27rkukm 221 1 J J NNP work_cfbskzb7hzha5apjddr27rkukm 221 2 Clin Clin NNP work_cfbskzb7hzha5apjddr27rkukm 221 3 Microbiol Microbiol NNP work_cfbskzb7hzha5apjddr27rkukm 221 4 2006 2006 CD work_cfbskzb7hzha5apjddr27rkukm 221 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 221 6 44 44 CD work_cfbskzb7hzha5apjddr27rkukm 221 7 : : SYM work_cfbskzb7hzha5apjddr27rkukm 221 8 4498–4510 4498–4510 CD work_cfbskzb7hzha5apjddr27rkukm 221 9 . . . work_cfbskzb7hzha5apjddr27rkukm 222 1 21 21 CD work_cfbskzb7hzha5apjddr27rkukm 222 2 . . . work_cfbskzb7hzha5apjddr27rkukm 223 1 Kolk Kolk NNP work_cfbskzb7hzha5apjddr27rkukm 223 2 AH AH NNP work_cfbskzb7hzha5apjddr27rkukm 223 3 , , , work_cfbskzb7hzha5apjddr27rkukm 223 4 Schuitema Schuitema NNP work_cfbskzb7hzha5apjddr27rkukm 223 5 AR AR NNP work_cfbskzb7hzha5apjddr27rkukm 223 6 , , , work_cfbskzb7hzha5apjddr27rkukm 223 7 Kuijper Kuijper NNP work_cfbskzb7hzha5apjddr27rkukm 223 8 S S NNP work_cfbskzb7hzha5apjddr27rkukm 223 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 223 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 223 11 . . . work_cfbskzb7hzha5apjddr27rkukm 224 1 Detection detection NN work_cfbskzb7hzha5apjddr27rkukm 224 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 224 3 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 224 4 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 224 5 in in IN work_cfbskzb7hzha5apjddr27rkukm 224 6 clinical clinical JJ work_cfbskzb7hzha5apjddr27rkukm 224 7 samples sample NNS work_cfbskzb7hzha5apjddr27rkukm 224 8 by by IN work_cfbskzb7hzha5apjddr27rkukm 224 9 using use VBG work_cfbskzb7hzha5apjddr27rkukm 224 10 polymerase polymerase NN work_cfbskzb7hzha5apjddr27rkukm 224 11 chain chain NN work_cfbskzb7hzha5apjddr27rkukm 224 12 reaction reaction NN work_cfbskzb7hzha5apjddr27rkukm 224 13 and and CC work_cfbskzb7hzha5apjddr27rkukm 224 14 a a DT work_cfbskzb7hzha5apjddr27rkukm 224 15 nonradioactive nonradioactive JJ work_cfbskzb7hzha5apjddr27rkukm 224 16 detection detection NN work_cfbskzb7hzha5apjddr27rkukm 224 17 system system NN work_cfbskzb7hzha5apjddr27rkukm 224 18 . . . work_cfbskzb7hzha5apjddr27rkukm 225 1 J J NNP work_cfbskzb7hzha5apjddr27rkukm 225 2 Clin Clin NNP work_cfbskzb7hzha5apjddr27rkukm 225 3 Microbiol Microbiol NNP work_cfbskzb7hzha5apjddr27rkukm 225 4 1992 1992 CD work_cfbskzb7hzha5apjddr27rkukm 225 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 225 6 30 30 CD work_cfbskzb7hzha5apjddr27rkukm 225 7 : : SYM work_cfbskzb7hzha5apjddr27rkukm 225 8 2567 2567 CD work_cfbskzb7hzha5apjddr27rkukm 225 9 – – : work_cfbskzb7hzha5apjddr27rkukm 225 10 2575 2575 CD work_cfbskzb7hzha5apjddr27rkukm 225 11 . . . work_cfbskzb7hzha5apjddr27rkukm 226 1 22 22 CD work_cfbskzb7hzha5apjddr27rkukm 226 2 . . . work_cfbskzb7hzha5apjddr27rkukm 227 1 Afanas’ev Afanas’ev NNP work_cfbskzb7hzha5apjddr27rkukm 227 2 MV MV NNP work_cfbskzb7hzha5apjddr27rkukm 227 3 , , , work_cfbskzb7hzha5apjddr27rkukm 227 4 Ikryannikova Ikryannikova NNP work_cfbskzb7hzha5apjddr27rkukm 227 5 LN LN NNP work_cfbskzb7hzha5apjddr27rkukm 227 6 , , , work_cfbskzb7hzha5apjddr27rkukm 227 7 Il’ina Il’ina NNP work_cfbskzb7hzha5apjddr27rkukm 227 8 EN EN NNP work_cfbskzb7hzha5apjddr27rkukm 227 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 227 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 227 11 . . . work_cfbskzb7hzha5apjddr27rkukm 228 1 Molecular molecular JJ work_cfbskzb7hzha5apjddr27rkukm 228 2 characteris- characteris- NN work_cfbskzb7hzha5apjddr27rkukm 228 3 tics tic NNS work_cfbskzb7hzha5apjddr27rkukm 228 4 of of IN work_cfbskzb7hzha5apjddr27rkukm 228 5 rifampicin- rifampicin- NN work_cfbskzb7hzha5apjddr27rkukm 228 6 and and CC work_cfbskzb7hzha5apjddr27rkukm 228 7 isoniazid isoniazid NN work_cfbskzb7hzha5apjddr27rkukm 228 8 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 228 9 resistant resistant JJ work_cfbskzb7hzha5apjddr27rkukm 228 10 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 228 11 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 228 12 isolates isolate VBZ work_cfbskzb7hzha5apjddr27rkukm 228 13 from from IN work_cfbskzb7hzha5apjddr27rkukm 228 14 the the DT work_cfbskzb7hzha5apjddr27rkukm 228 15 Russian Russian NNP work_cfbskzb7hzha5apjddr27rkukm 228 16 Federation Federation NNP work_cfbskzb7hzha5apjddr27rkukm 228 17 . . . work_cfbskzb7hzha5apjddr27rkukm 229 1 J J NNP work_cfbskzb7hzha5apjddr27rkukm 229 2 Antimicrob Antimicrob NNP work_cfbskzb7hzha5apjddr27rkukm 229 3 Chemother Chemother NNP work_cfbskzb7hzha5apjddr27rkukm 229 4 2007 2007 CD work_cfbskzb7hzha5apjddr27rkukm 229 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 229 6 59 59 CD work_cfbskzb7hzha5apjddr27rkukm 229 7 : : : work_cfbskzb7hzha5apjddr27rkukm 229 8 1057–1064 1057–1064 CD work_cfbskzb7hzha5apjddr27rkukm 229 9 . . . work_cfbskzb7hzha5apjddr27rkukm 230 1 23 23 CD work_cfbskzb7hzha5apjddr27rkukm 230 2 . . . work_cfbskzb7hzha5apjddr27rkukm 231 1 Tosh Tosh NNP work_cfbskzb7hzha5apjddr27rkukm 231 2 K K NNP work_cfbskzb7hzha5apjddr27rkukm 231 3 , , , work_cfbskzb7hzha5apjddr27rkukm 231 4 Campbell Campbell NNP work_cfbskzb7hzha5apjddr27rkukm 231 5 SJ SJ NNP work_cfbskzb7hzha5apjddr27rkukm 231 6 , , , work_cfbskzb7hzha5apjddr27rkukm 231 7 Fielding Fielding NNP work_cfbskzb7hzha5apjddr27rkukm 231 8 K K NNP work_cfbskzb7hzha5apjddr27rkukm 231 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 231 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 231 11 . . . work_cfbskzb7hzha5apjddr27rkukm 232 1 Variants variant NNS work_cfbskzb7hzha5apjddr27rkukm 232 2 in in IN work_cfbskzb7hzha5apjddr27rkukm 232 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 232 4 SP110 SP110 NNP work_cfbskzb7hzha5apjddr27rkukm 232 5 gene gene NN work_cfbskzb7hzha5apjddr27rkukm 232 6 are be VBP work_cfbskzb7hzha5apjddr27rkukm 232 7 associated associate VBN work_cfbskzb7hzha5apjddr27rkukm 232 8 with with IN work_cfbskzb7hzha5apjddr27rkukm 232 9 genetic genetic JJ work_cfbskzb7hzha5apjddr27rkukm 232 10 susceptibility susceptibility NN work_cfbskzb7hzha5apjddr27rkukm 232 11 to to IN work_cfbskzb7hzha5apjddr27rkukm 232 12 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 232 13 in in IN work_cfbskzb7hzha5apjddr27rkukm 232 14 West West NNP work_cfbskzb7hzha5apjddr27rkukm 232 15 Africa Africa NNP work_cfbskzb7hzha5apjddr27rkukm 232 16 . . . work_cfbskzb7hzha5apjddr27rkukm 233 1 Proc Proc NNP work_cfbskzb7hzha5apjddr27rkukm 233 2 Natl Natl NNP work_cfbskzb7hzha5apjddr27rkukm 233 3 Acad Acad NNP work_cfbskzb7hzha5apjddr27rkukm 233 4 Sci Sci NNP work_cfbskzb7hzha5apjddr27rkukm 233 5 U U NNP work_cfbskzb7hzha5apjddr27rkukm 233 6 S S NNP work_cfbskzb7hzha5apjddr27rkukm 233 7 A A NNP work_cfbskzb7hzha5apjddr27rkukm 233 8 2006 2006 CD work_cfbskzb7hzha5apjddr27rkukm 233 9 ; ; : work_cfbskzb7hzha5apjddr27rkukm 233 10 103 103 CD work_cfbskzb7hzha5apjddr27rkukm 233 11 : : SYM work_cfbskzb7hzha5apjddr27rkukm 233 12 10364–10368 10364–10368 CD work_cfbskzb7hzha5apjddr27rkukm 233 13 . . . work_cfbskzb7hzha5apjddr27rkukm 234 1 24 24 CD work_cfbskzb7hzha5apjddr27rkukm 234 2 . . . work_cfbskzb7hzha5apjddr27rkukm 235 1 Chuang Chuang NNP work_cfbskzb7hzha5apjddr27rkukm 235 2 PC PC NNP work_cfbskzb7hzha5apjddr27rkukm 235 3 , , , work_cfbskzb7hzha5apjddr27rkukm 235 4 Chen Chen NNP work_cfbskzb7hzha5apjddr27rkukm 235 5 YM YM NNP work_cfbskzb7hzha5apjddr27rkukm 235 6 , , , work_cfbskzb7hzha5apjddr27rkukm 235 7 Chen Chen NNP work_cfbskzb7hzha5apjddr27rkukm 235 8 HY HY NNP work_cfbskzb7hzha5apjddr27rkukm 235 9 et et NNP work_cfbskzb7hzha5apjddr27rkukm 235 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 235 11 . . . work_cfbskzb7hzha5apjddr27rkukm 236 1 Single single JJ work_cfbskzb7hzha5apjddr27rkukm 236 2 nucleotide nucleotide JJ work_cfbskzb7hzha5apjddr27rkukm 236 3 polymor- polymor- NN work_cfbskzb7hzha5apjddr27rkukm 236 4 phisms phism NNS work_cfbskzb7hzha5apjddr27rkukm 236 5 in in IN work_cfbskzb7hzha5apjddr27rkukm 236 6 cell cell NN work_cfbskzb7hzha5apjddr27rkukm 236 7 wall wall NNP work_cfbskzb7hzha5apjddr27rkukm 236 8 biosynthesis biosynthesis NNP work_cfbskzb7hzha5apjddr27rkukm 236 9 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 236 10 associated associate VBN work_cfbskzb7hzha5apjddr27rkukm 236 11 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 236 12 and and CC work_cfbskzb7hzha5apjddr27rkukm 236 13 phylogeny phylogeny NN work_cfbskzb7hzha5apjddr27rkukm 236 14 of of IN work_cfbskzb7hzha5apjddr27rkukm 236 15 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 236 16 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 236 17 lineages lineage NNS work_cfbskzb7hzha5apjddr27rkukm 236 18 . . . work_cfbskzb7hzha5apjddr27rkukm 237 1 Infect infect VB work_cfbskzb7hzha5apjddr27rkukm 237 2 Genet Genet NNP work_cfbskzb7hzha5apjddr27rkukm 237 3 Evol Evol NNP work_cfbskzb7hzha5apjddr27rkukm 237 4 2010 2010 CD work_cfbskzb7hzha5apjddr27rkukm 237 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 237 6 10 10 CD work_cfbskzb7hzha5apjddr27rkukm 237 7 : : : work_cfbskzb7hzha5apjddr27rkukm 237 8 459–466 459–466 CD work_cfbskzb7hzha5apjddr27rkukm 237 9 . . . work_cfbskzb7hzha5apjddr27rkukm 238 1 25 25 CD work_cfbskzb7hzha5apjddr27rkukm 238 2 . . . work_cfbskzb7hzha5apjddr27rkukm 239 1 Wada Wada NNP work_cfbskzb7hzha5apjddr27rkukm 239 2 T T NNP work_cfbskzb7hzha5apjddr27rkukm 239 3 , , , work_cfbskzb7hzha5apjddr27rkukm 239 4 Iwamoto Iwamoto NNP work_cfbskzb7hzha5apjddr27rkukm 239 5 T. T. NNP work_cfbskzb7hzha5apjddr27rkukm 239 6 Allelic allelic JJ work_cfbskzb7hzha5apjddr27rkukm 239 7 diversity diversity NN work_cfbskzb7hzha5apjddr27rkukm 239 8 of of IN work_cfbskzb7hzha5apjddr27rkukm 239 9 variable variable JJ work_cfbskzb7hzha5apjddr27rkukm 239 10 number number NN work_cfbskzb7hzha5apjddr27rkukm 239 11 of of IN work_cfbskzb7hzha5apjddr27rkukm 239 12 tandem tandem NN work_cfbskzb7hzha5apjddr27rkukm 239 13 repeats repeat NNS work_cfbskzb7hzha5apjddr27rkukm 239 14 provides provide VBZ work_cfbskzb7hzha5apjddr27rkukm 239 15 phylogenetic phylogenetic JJ work_cfbskzb7hzha5apjddr27rkukm 239 16 clues clue NNS work_cfbskzb7hzha5apjddr27rkukm 239 17 regarding regard VBG work_cfbskzb7hzha5apjddr27rkukm 239 18 the the DT work_cfbskzb7hzha5apjddr27rkukm 239 19 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 239 20 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 239 21 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 239 22 family family NN work_cfbskzb7hzha5apjddr27rkukm 239 23 . . . work_cfbskzb7hzha5apjddr27rkukm 240 1 Infect infect VB work_cfbskzb7hzha5apjddr27rkukm 240 2 Genet Genet NNP work_cfbskzb7hzha5apjddr27rkukm 240 3 Evol Evol NNP work_cfbskzb7hzha5apjddr27rkukm 240 4 2009 2009 CD work_cfbskzb7hzha5apjddr27rkukm 240 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 240 6 9 9 CD work_cfbskzb7hzha5apjddr27rkukm 240 7 : : SYM work_cfbskzb7hzha5apjddr27rkukm 240 8 921–926 921–926 CD work_cfbskzb7hzha5apjddr27rkukm 240 9 . . . work_cfbskzb7hzha5apjddr27rkukm 241 1 26 26 CD work_cfbskzb7hzha5apjddr27rkukm 241 2 . . . work_cfbskzb7hzha5apjddr27rkukm 242 1 Moreland Moreland NNP work_cfbskzb7hzha5apjddr27rkukm 242 2 NJ NJ NNP work_cfbskzb7hzha5apjddr27rkukm 242 3 , , , work_cfbskzb7hzha5apjddr27rkukm 242 4 Charlier Charlier NNP work_cfbskzb7hzha5apjddr27rkukm 242 5 C C NNP work_cfbskzb7hzha5apjddr27rkukm 242 6 , , , work_cfbskzb7hzha5apjddr27rkukm 242 7 Dingley Dingley NNP work_cfbskzb7hzha5apjddr27rkukm 242 8 AJ AJ NNP work_cfbskzb7hzha5apjddr27rkukm 242 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 242 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 242 11 . . . work_cfbskzb7hzha5apjddr27rkukm 243 1 Making make VBG work_cfbskzb7hzha5apjddr27rkukm 243 2 sense sense NN work_cfbskzb7hzha5apjddr27rkukm 243 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 243 4 a a DT work_cfbskzb7hzha5apjddr27rkukm 243 5 missense missense NN work_cfbskzb7hzha5apjddr27rkukm 243 6 mutation mutation NN work_cfbskzb7hzha5apjddr27rkukm 243 7 : : : work_cfbskzb7hzha5apjddr27rkukm 243 8 characterization characterization NN work_cfbskzb7hzha5apjddr27rkukm 243 9 of of IN work_cfbskzb7hzha5apjddr27rkukm 243 10 MutT2 MutT2 NNP work_cfbskzb7hzha5apjddr27rkukm 243 11 , , , work_cfbskzb7hzha5apjddr27rkukm 243 12 a a DT work_cfbskzb7hzha5apjddr27rkukm 243 13 Nudix Nudix NNP work_cfbskzb7hzha5apjddr27rkukm 243 14 hydrolase hydrolase NN work_cfbskzb7hzha5apjddr27rkukm 243 15 from from IN work_cfbskzb7hzha5apjddr27rkukm 243 16 Myco- Myco- NNP work_cfbskzb7hzha5apjddr27rkukm 243 17 bacterium bacterium NN work_cfbskzb7hzha5apjddr27rkukm 243 18 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 243 19 , , , work_cfbskzb7hzha5apjddr27rkukm 243 20 and and CC work_cfbskzb7hzha5apjddr27rkukm 243 21 the the DT work_cfbskzb7hzha5apjddr27rkukm 243 22 G58R G58R NNP work_cfbskzb7hzha5apjddr27rkukm 243 23 mutant mutant NN work_cfbskzb7hzha5apjddr27rkukm 243 24 encoded encode VBN work_cfbskzb7hzha5apjddr27rkukm 243 25 in in IN work_cfbskzb7hzha5apjddr27rkukm 243 26 W W NNP work_cfbskzb7hzha5apjddr27rkukm 243 27 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 243 28 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 243 29 strains strain NNS work_cfbskzb7hzha5apjddr27rkukm 243 30 of of IN work_cfbskzb7hzha5apjddr27rkukm 243 31 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 243 32 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 243 33 . . . work_cfbskzb7hzha5apjddr27rkukm 244 1 Biochemistry Biochemistry NNP work_cfbskzb7hzha5apjddr27rkukm 244 2 2009 2009 CD work_cfbskzb7hzha5apjddr27rkukm 244 3 ; ; : work_cfbskzb7hzha5apjddr27rkukm 244 4 48 48 CD work_cfbskzb7hzha5apjddr27rkukm 244 5 : : : work_cfbskzb7hzha5apjddr27rkukm 244 6 699–708 699–708 CD work_cfbskzb7hzha5apjddr27rkukm 244 7 . . . work_cfbskzb7hzha5apjddr27rkukm 245 1 27 27 CD work_cfbskzb7hzha5apjddr27rkukm 245 2 . . . work_cfbskzb7hzha5apjddr27rkukm 246 1 Hanekom Hanekom NNP work_cfbskzb7hzha5apjddr27rkukm 246 2 M M NNP work_cfbskzb7hzha5apjddr27rkukm 246 3 , , , work_cfbskzb7hzha5apjddr27rkukm 246 4 van van NNP work_cfbskzb7hzha5apjddr27rkukm 246 5 der der NNP work_cfbskzb7hzha5apjddr27rkukm 246 6 Spuy Spuy NNP work_cfbskzb7hzha5apjddr27rkukm 246 7 GD GD NNP work_cfbskzb7hzha5apjddr27rkukm 246 8 , , , work_cfbskzb7hzha5apjddr27rkukm 246 9 Streicher Streicher NNP work_cfbskzb7hzha5apjddr27rkukm 246 10 E E NNP work_cfbskzb7hzha5apjddr27rkukm 246 11 et et NNP work_cfbskzb7hzha5apjddr27rkukm 246 12 al al NNP work_cfbskzb7hzha5apjddr27rkukm 246 13 . . . work_cfbskzb7hzha5apjddr27rkukm 247 1 A a DT work_cfbskzb7hzha5apjddr27rkukm 247 2 recently recently RB work_cfbskzb7hzha5apjddr27rkukm 247 3 evolved evolve VBN work_cfbskzb7hzha5apjddr27rkukm 247 4 sublineage sublineage NN work_cfbskzb7hzha5apjddr27rkukm 247 5 of of IN work_cfbskzb7hzha5apjddr27rkukm 247 6 the the DT work_cfbskzb7hzha5apjddr27rkukm 247 7 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 247 8 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 247 9 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 247 10 strain strain VBP work_cfbskzb7hzha5apjddr27rkukm 247 11 family family NN work_cfbskzb7hzha5apjddr27rkukm 247 12 is be VBZ work_cfbskzb7hzha5apjddr27rkukm 247 13 associated associate VBN work_cfbskzb7hzha5apjddr27rkukm 247 14 with with IN work_cfbskzb7hzha5apjddr27rkukm 247 15 an an DT work_cfbskzb7hzha5apjddr27rkukm 247 16 increased increase VBN work_cfbskzb7hzha5apjddr27rkukm 247 17 ability ability NN work_cfbskzb7hzha5apjddr27rkukm 247 18 to to TO work_cfbskzb7hzha5apjddr27rkukm 247 19 spread spread VB work_cfbskzb7hzha5apjddr27rkukm 247 20 and and CC work_cfbskzb7hzha5apjddr27rkukm 247 21 cause cause VB work_cfbskzb7hzha5apjddr27rkukm 247 22 disease disease NN work_cfbskzb7hzha5apjddr27rkukm 247 23 . . . work_cfbskzb7hzha5apjddr27rkukm 248 1 J J NNP work_cfbskzb7hzha5apjddr27rkukm 248 2 Clin Clin NNP work_cfbskzb7hzha5apjddr27rkukm 248 3 Microbiol Microbiol NNP work_cfbskzb7hzha5apjddr27rkukm 248 4 2007 2007 CD work_cfbskzb7hzha5apjddr27rkukm 248 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 248 6 45 45 CD work_cfbskzb7hzha5apjddr27rkukm 248 7 : : SYM work_cfbskzb7hzha5apjddr27rkukm 248 8 1483–1490 1483–1490 CD work_cfbskzb7hzha5apjddr27rkukm 248 9 . . . work_cfbskzb7hzha5apjddr27rkukm 249 1 28 28 CD work_cfbskzb7hzha5apjddr27rkukm 249 2 . . . work_cfbskzb7hzha5apjddr27rkukm 250 1 Gagneux Gagneux NNP work_cfbskzb7hzha5apjddr27rkukm 250 2 S S NNP work_cfbskzb7hzha5apjddr27rkukm 250 3 , , , work_cfbskzb7hzha5apjddr27rkukm 250 4 DeRiemer DeRiemer NNP work_cfbskzb7hzha5apjddr27rkukm 250 5 K K NNP work_cfbskzb7hzha5apjddr27rkukm 250 6 , , , work_cfbskzb7hzha5apjddr27rkukm 250 7 Van Van NNP work_cfbskzb7hzha5apjddr27rkukm 250 8 T T NNP work_cfbskzb7hzha5apjddr27rkukm 250 9 et et NNP work_cfbskzb7hzha5apjddr27rkukm 250 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 250 11 . . . work_cfbskzb7hzha5apjddr27rkukm 251 1 Variable variable JJ work_cfbskzb7hzha5apjddr27rkukm 251 2 host host NN work_cfbskzb7hzha5apjddr27rkukm 251 3 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 251 4 pathogen pathogen NN work_cfbskzb7hzha5apjddr27rkukm 251 5 compat- compat- XX work_cfbskzb7hzha5apjddr27rkukm 251 6 ibility ibility NN work_cfbskzb7hzha5apjddr27rkukm 251 7 in in IN work_cfbskzb7hzha5apjddr27rkukm 251 8 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 251 9 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 251 10 . . . work_cfbskzb7hzha5apjddr27rkukm 252 1 Proc Proc NNP work_cfbskzb7hzha5apjddr27rkukm 252 2 Natl Natl NNP work_cfbskzb7hzha5apjddr27rkukm 252 3 Acad Acad NNP work_cfbskzb7hzha5apjddr27rkukm 252 4 Sci Sci NNP work_cfbskzb7hzha5apjddr27rkukm 252 5 U U NNP work_cfbskzb7hzha5apjddr27rkukm 252 6 S S NNP work_cfbskzb7hzha5apjddr27rkukm 252 7 A A NNP work_cfbskzb7hzha5apjddr27rkukm 252 8 2006 2006 CD work_cfbskzb7hzha5apjddr27rkukm 252 9 ; ; : work_cfbskzb7hzha5apjddr27rkukm 252 10 103 103 CD work_cfbskzb7hzha5apjddr27rkukm 252 11 : : SYM work_cfbskzb7hzha5apjddr27rkukm 252 12 2869–2873 2869–2873 CD work_cfbskzb7hzha5apjddr27rkukm 252 13 . . . work_cfbskzb7hzha5apjddr27rkukm 253 1 29 29 CD work_cfbskzb7hzha5apjddr27rkukm 253 2 . . . work_cfbskzb7hzha5apjddr27rkukm 254 1 Mokrousov Mokrousov NNP work_cfbskzb7hzha5apjddr27rkukm 254 2 I I NNP work_cfbskzb7hzha5apjddr27rkukm 254 3 , , , work_cfbskzb7hzha5apjddr27rkukm 254 4 Valcheva Valcheva NNP work_cfbskzb7hzha5apjddr27rkukm 254 5 V V NNP work_cfbskzb7hzha5apjddr27rkukm 254 6 , , , work_cfbskzb7hzha5apjddr27rkukm 254 7 Sovhozova Sovhozova NNP work_cfbskzb7hzha5apjddr27rkukm 254 8 N N NNP work_cfbskzb7hzha5apjddr27rkukm 254 9 et et NNP work_cfbskzb7hzha5apjddr27rkukm 254 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 254 11 . . . work_cfbskzb7hzha5apjddr27rkukm 255 1 Penitentiary penitentiary JJ work_cfbskzb7hzha5apjddr27rkukm 255 2 population population NN work_cfbskzb7hzha5apjddr27rkukm 255 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 255 4 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 255 5 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 255 6 in in IN work_cfbskzb7hzha5apjddr27rkukm 255 7 Kyrgyzstan Kyrgyzstan NNP work_cfbskzb7hzha5apjddr27rkukm 255 8 : : : work_cfbskzb7hzha5apjddr27rkukm 255 9 exceptionally exceptionally RB work_cfbskzb7hzha5apjddr27rkukm 255 10 high high JJ work_cfbskzb7hzha5apjddr27rkukm 255 11 preva- preva- JJ work_cfbskzb7hzha5apjddr27rkukm 255 12 lence lence NN work_cfbskzb7hzha5apjddr27rkukm 255 13 of of IN work_cfbskzb7hzha5apjddr27rkukm 255 14 the the DT work_cfbskzb7hzha5apjddr27rkukm 255 15 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 255 16 genotype genotype NN work_cfbskzb7hzha5apjddr27rkukm 255 17 and and CC work_cfbskzb7hzha5apjddr27rkukm 255 18 its -PRON- PRP$ work_cfbskzb7hzha5apjddr27rkukm 255 19 Russia Russia NNP work_cfbskzb7hzha5apjddr27rkukm 255 20 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 255 21 specific specific JJ work_cfbskzb7hzha5apjddr27rkukm 255 22 subtype subtype NN work_cfbskzb7hzha5apjddr27rkukm 255 23 . . . work_cfbskzb7hzha5apjddr27rkukm 256 1 Infect infect VB work_cfbskzb7hzha5apjddr27rkukm 256 2 Genet Genet NNP work_cfbskzb7hzha5apjddr27rkukm 256 3 Evol Evol NNP work_cfbskzb7hzha5apjddr27rkukm 256 4 2009 2009 CD work_cfbskzb7hzha5apjddr27rkukm 256 5 ; ; : work_cfbskzb7hzha5apjddr27rkukm 256 6 9 9 CD work_cfbskzb7hzha5apjddr27rkukm 256 7 : : SYM work_cfbskzb7hzha5apjddr27rkukm 256 8 1400–1405 1400–1405 CD work_cfbskzb7hzha5apjddr27rkukm 256 9 . . . work_cfbskzb7hzha5apjddr27rkukm 257 1 30 30 CD work_cfbskzb7hzha5apjddr27rkukm 257 2 . . . work_cfbskzb7hzha5apjddr27rkukm 258 1 Reed Reed NNP work_cfbskzb7hzha5apjddr27rkukm 258 2 MB MB NNP work_cfbskzb7hzha5apjddr27rkukm 258 3 , , , work_cfbskzb7hzha5apjddr27rkukm 258 4 Domenech Domenech NNP work_cfbskzb7hzha5apjddr27rkukm 258 5 P P NNP work_cfbskzb7hzha5apjddr27rkukm 258 6 , , , work_cfbskzb7hzha5apjddr27rkukm 258 7 Manca Manca NNP work_cfbskzb7hzha5apjddr27rkukm 258 8 C C NNP work_cfbskzb7hzha5apjddr27rkukm 258 9 et et NNP work_cfbskzb7hzha5apjddr27rkukm 258 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 258 11 . . . work_cfbskzb7hzha5apjddr27rkukm 259 1 A a DT work_cfbskzb7hzha5apjddr27rkukm 259 2 glycolipid glycolipid NN work_cfbskzb7hzha5apjddr27rkukm 259 3 of of IN work_cfbskzb7hzha5apjddr27rkukm 259 4 hypervirulent hypervirulent JJ work_cfbskzb7hzha5apjddr27rkukm 259 5 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 259 6 strains strain VBZ work_cfbskzb7hzha5apjddr27rkukm 259 7 that that WDT work_cfbskzb7hzha5apjddr27rkukm 259 8 inhibits inhibit VBZ work_cfbskzb7hzha5apjddr27rkukm 259 9 the the DT work_cfbskzb7hzha5apjddr27rkukm 259 10 innate innate JJ work_cfbskzb7hzha5apjddr27rkukm 259 11 immune immune JJ work_cfbskzb7hzha5apjddr27rkukm 259 12 response response NN work_cfbskzb7hzha5apjddr27rkukm 259 13 . . . work_cfbskzb7hzha5apjddr27rkukm 260 1 Nature nature NN work_cfbskzb7hzha5apjddr27rkukm 260 2 2004 2004 CD work_cfbskzb7hzha5apjddr27rkukm 260 3 ; ; : work_cfbskzb7hzha5apjddr27rkukm 260 4 431 431 CD work_cfbskzb7hzha5apjddr27rkukm 260 5 : : : work_cfbskzb7hzha5apjddr27rkukm 260 6 84–87 84–87 CD work_cfbskzb7hzha5apjddr27rkukm 260 7 . . . work_cfbskzb7hzha5apjddr27rkukm 261 1 31 31 CD work_cfbskzb7hzha5apjddr27rkukm 261 2 . . . work_cfbskzb7hzha5apjddr27rkukm 262 1 Armitige Armitige NNP work_cfbskzb7hzha5apjddr27rkukm 262 2 LY LY NNP work_cfbskzb7hzha5apjddr27rkukm 262 3 , , , work_cfbskzb7hzha5apjddr27rkukm 262 4 Jagannath Jagannath NNP work_cfbskzb7hzha5apjddr27rkukm 262 5 C C NNP work_cfbskzb7hzha5apjddr27rkukm 262 6 , , , work_cfbskzb7hzha5apjddr27rkukm 262 7 Wanger Wanger NNP work_cfbskzb7hzha5apjddr27rkukm 262 8 AR AR NNP work_cfbskzb7hzha5apjddr27rkukm 262 9 et et FW work_cfbskzb7hzha5apjddr27rkukm 262 10 al al NNP work_cfbskzb7hzha5apjddr27rkukm 262 11 . . . work_cfbskzb7hzha5apjddr27rkukm 263 1 Disruption disruption NN work_cfbskzb7hzha5apjddr27rkukm 263 2 of of IN work_cfbskzb7hzha5apjddr27rkukm 263 3 the the DT work_cfbskzb7hzha5apjddr27rkukm 263 4 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 263 5 encoding encode VBG work_cfbskzb7hzha5apjddr27rkukm 263 6 antigen antigen NNP work_cfbskzb7hzha5apjddr27rkukm 263 7 85A 85A NNP work_cfbskzb7hzha5apjddr27rkukm 263 8 and and CC work_cfbskzb7hzha5apjddr27rkukm 263 9 antigen antigen NN work_cfbskzb7hzha5apjddr27rkukm 263 10 85B 85b CD work_cfbskzb7hzha5apjddr27rkukm 263 11 of of IN work_cfbskzb7hzha5apjddr27rkukm 263 12 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 263 13 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 263 14 H37Rv h37rv UH work_cfbskzb7hzha5apjddr27rkukm 263 15 : : : work_cfbskzb7hzha5apjddr27rkukm 263 16 effect effect NN work_cfbskzb7hzha5apjddr27rkukm 263 17 on on IN work_cfbskzb7hzha5apjddr27rkukm 263 18 growth growth NN work_cfbskzb7hzha5apjddr27rkukm 263 19 in in IN work_cfbskzb7hzha5apjddr27rkukm 263 20 culture culture NN work_cfbskzb7hzha5apjddr27rkukm 263 21 and and CC work_cfbskzb7hzha5apjddr27rkukm 263 22 in in IN work_cfbskzb7hzha5apjddr27rkukm 263 23 macrophages macrophage NNS work_cfbskzb7hzha5apjddr27rkukm 263 24 . . . work_cfbskzb7hzha5apjddr27rkukm 264 1 Infect Infect NNP work_cfbskzb7hzha5apjddr27rkukm 264 2 Immun Immun NNP work_cfbskzb7hzha5apjddr27rkukm 264 3 2000 2000 CD work_cfbskzb7hzha5apjddr27rkukm 264 4 ; ; : work_cfbskzb7hzha5apjddr27rkukm 264 5 68 68 CD work_cfbskzb7hzha5apjddr27rkukm 264 6 : : : work_cfbskzb7hzha5apjddr27rkukm 264 7 767–778 767–778 CD work_cfbskzb7hzha5apjddr27rkukm 264 8 . . . work_cfbskzb7hzha5apjddr27rkukm 265 1 1396 1396 CD work_cfbskzb7hzha5apjddr27rkukm 265 2 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 265 3 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 265 4 and and CC work_cfbskzb7hzha5apjddr27rkukm 265 5 Infection Infection NNP work_cfbskzb7hzha5apjddr27rkukm 265 6 , , , work_cfbskzb7hzha5apjddr27rkukm 265 7 Volume volume NN work_cfbskzb7hzha5apjddr27rkukm 265 8 17 17 CD work_cfbskzb7hzha5apjddr27rkukm 265 9 Number number NN work_cfbskzb7hzha5apjddr27rkukm 265 10 9 9 CD work_cfbskzb7hzha5apjddr27rkukm 265 11 , , , work_cfbskzb7hzha5apjddr27rkukm 265 12 September September NNP work_cfbskzb7hzha5apjddr27rkukm 265 13 2011 2011 CD work_cfbskzb7hzha5apjddr27rkukm 265 14 CMI CMI NNP work_cfbskzb7hzha5apjddr27rkukm 265 15 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 265 16 The the DT work_cfbskzb7hzha5apjddr27rkukm 265 17 Authors Authors NNPS work_cfbskzb7hzha5apjddr27rkukm 265 18 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 265 19 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 265 20 and and CC work_cfbskzb7hzha5apjddr27rkukm 265 21 Infection Infection NNP work_cfbskzb7hzha5apjddr27rkukm 265 22 ª2010 ª2010 NNP work_cfbskzb7hzha5apjddr27rkukm 265 23 European European NNP work_cfbskzb7hzha5apjddr27rkukm 265 24 Society Society NNP work_cfbskzb7hzha5apjddr27rkukm 265 25 of of IN work_cfbskzb7hzha5apjddr27rkukm 265 26 Clinical Clinical NNP work_cfbskzb7hzha5apjddr27rkukm 265 27 Microbiology Microbiology NNP work_cfbskzb7hzha5apjddr27rkukm 265 28 and and CC work_cfbskzb7hzha5apjddr27rkukm 265 29 Infectious Infectious NNP work_cfbskzb7hzha5apjddr27rkukm 265 30 Diseases Diseases NNPS work_cfbskzb7hzha5apjddr27rkukm 265 31 , , , work_cfbskzb7hzha5apjddr27rkukm 265 32 CMI CMI NNP work_cfbskzb7hzha5apjddr27rkukm 265 33 , , , work_cfbskzb7hzha5apjddr27rkukm 265 34 17 17 CD work_cfbskzb7hzha5apjddr27rkukm 265 35 , , , work_cfbskzb7hzha5apjddr27rkukm 265 36 1391–1396 1391–1396 CD work_cfbskzb7hzha5apjddr27rkukm 265 37 Genotypic genotypic JJ work_cfbskzb7hzha5apjddr27rkukm 265 38 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 265 39 of of IN work_cfbskzb7hzha5apjddr27rkukm 265 40 genes gene NNS work_cfbskzb7hzha5apjddr27rkukm 265 41 associated associate VBN work_cfbskzb7hzha5apjddr27rkukm 265 42 with with IN work_cfbskzb7hzha5apjddr27rkukm 265 43 transmission transmission NN work_cfbskzb7hzha5apjddr27rkukm 265 44 and and CC work_cfbskzb7hzha5apjddr27rkukm 265 45 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 265 46 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 265 47 in in IN work_cfbskzb7hzha5apjddr27rkukm 265 48 the the DT work_cfbskzb7hzha5apjddr27rkukm 265 49 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 265 50 lineage lineage NN work_cfbskzb7hzha5apjddr27rkukm 265 51 of of IN work_cfbskzb7hzha5apjddr27rkukm 265 52 Mycobacterium Mycobacterium NNP work_cfbskzb7hzha5apjddr27rkukm 265 53 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 265 54 Introduction introduction NN work_cfbskzb7hzha5apjddr27rkukm 265 55 Materials Materials NNPS work_cfbskzb7hzha5apjddr27rkukm 265 56 and and CC work_cfbskzb7hzha5apjddr27rkukm 265 57 Methods Methods NNP work_cfbskzb7hzha5apjddr27rkukm 265 58 Study Study NNP work_cfbskzb7hzha5apjddr27rkukm 265 59 population population NN work_cfbskzb7hzha5apjddr27rkukm 265 60 and and CC work_cfbskzb7hzha5apjddr27rkukm 265 61 bacterial bacterial JJ work_cfbskzb7hzha5apjddr27rkukm 265 62 isolates isolate NNS work_cfbskzb7hzha5apjddr27rkukm 265 63 NTF NTF NNP work_cfbskzb7hzha5apjddr27rkukm 265 64 locus locus NN work_cfbskzb7hzha5apjddr27rkukm 265 65 analysis analysis NN work_cfbskzb7hzha5apjddr27rkukm 265 66 Detection detection NN work_cfbskzb7hzha5apjddr27rkukm 265 67 of of IN work_cfbskzb7hzha5apjddr27rkukm 265 68 RD RD NNP work_cfbskzb7hzha5apjddr27rkukm 265 69 deletions deletion NNS work_cfbskzb7hzha5apjddr27rkukm 265 70 SNP SNP NNP work_cfbskzb7hzha5apjddr27rkukm 265 71 typing typing NN work_cfbskzb7hzha5apjddr27rkukm 265 72 Results Results NNP work_cfbskzb7hzha5apjddr27rkukm 265 73 Molecular Molecular NNP work_cfbskzb7hzha5apjddr27rkukm 265 74 polymorphisms polymorphism NNS work_cfbskzb7hzha5apjddr27rkukm 265 75 and and CC work_cfbskzb7hzha5apjddr27rkukm 265 76 drug drug NN work_cfbskzb7hzha5apjddr27rkukm 265 77 resistance resistance NN work_cfbskzb7hzha5apjddr27rkukm 265 78 of of IN work_cfbskzb7hzha5apjddr27rkukm 265 79 M. M. NNP work_cfbskzb7hzha5apjddr27rkukm 265 80 tuberculosis tuberculosis NN work_cfbskzb7hzha5apjddr27rkukm 265 81 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 265 82 isolates isolate VBZ work_cfbskzb7hzha5apjddr27rkukm 265 83 Phylogenetic phylogenetic JJ work_cfbskzb7hzha5apjddr27rkukm 265 84 classification classification NN work_cfbskzb7hzha5apjddr27rkukm 265 85 of of IN work_cfbskzb7hzha5apjddr27rkukm 265 86 Beijing Beijing NNP work_cfbskzb7hzha5apjddr27rkukm 265 87 family family NN work_cfbskzb7hzha5apjddr27rkukm 265 88 isolates isolate VBZ work_cfbskzb7hzha5apjddr27rkukm 265 89 based base VBN work_cfbskzb7hzha5apjddr27rkukm 265 90 on on IN work_cfbskzb7hzha5apjddr27rkukm 265 91 MIRU MIRU NNP work_cfbskzb7hzha5apjddr27rkukm 265 92 - - HYPH work_cfbskzb7hzha5apjddr27rkukm 265 93 VNTR vntr NN work_cfbskzb7hzha5apjddr27rkukm 265 94 typing typing NN work_cfbskzb7hzha5apjddr27rkukm 265 95 and and CC work_cfbskzb7hzha5apjddr27rkukm 265 96 RD rd NN work_cfbskzb7hzha5apjddr27rkukm 265 97 typing type VBG work_cfbskzb7hzha5apjddr27rkukm 265 98 Discussion Discussion NNP work_cfbskzb7hzha5apjddr27rkukm 265 99 Acknowledgements Acknowledgements NNP work_cfbskzb7hzha5apjddr27rkukm 265 100 Transparency Transparency NNP work_cfbskzb7hzha5apjddr27rkukm 265 101 Declaration Declaration NNP work_cfbskzb7hzha5apjddr27rkukm 265 102 References reference NNS