id sid tid token lemma pos cord-287647-0nyquokt 1 1 key key NN cord-287647-0nyquokt 1 2 : : : cord-287647-0nyquokt 2 1 cord-287647 cord-287647 NNP cord-287647-0nyquokt 2 2 - - HYPH cord-287647-0nyquokt 2 3 0nyquokt 0nyquokt CD cord-287647-0nyquokt 2 4 authors author NNS cord-287647-0nyquokt 2 5 : : : cord-287647-0nyquokt 2 6 Nemoto Nemoto NNP cord-287647-0nyquokt 2 7 , , , cord-287647-0nyquokt 2 8 Manabu Manabu NNP cord-287647-0nyquokt 2 9 ; ; : cord-287647-0nyquokt 2 10 Schofield Schofield NNP cord-287647-0nyquokt 2 11 , , , cord-287647-0nyquokt 2 12 Warren Warren NNP cord-287647-0nyquokt 2 13 ; ; : cord-287647-0nyquokt 2 14 Cullinane Cullinane NNP cord-287647-0nyquokt 2 15 , , , cord-287647-0nyquokt 3 1 Ann Ann NNP cord-287647-0nyquokt 3 2 title title NN cord-287647-0nyquokt 3 3 : : : cord-287647-0nyquokt 3 4 The the DT cord-287647-0nyquokt 3 5 First First NNP cord-287647-0nyquokt 3 6 Detection Detection NNP cord-287647-0nyquokt 3 7 of of IN cord-287647-0nyquokt 3 8 Equine Equine NNP cord-287647-0nyquokt 3 9 Coronavirus Coronavirus NNP cord-287647-0nyquokt 3 10 in in IN cord-287647-0nyquokt 3 11 Adult Adult NNP cord-287647-0nyquokt 3 12 Horses horse NNS cord-287647-0nyquokt 3 13 and and CC cord-287647-0nyquokt 3 14 Foals Foals NNPS cord-287647-0nyquokt 3 15 in in IN cord-287647-0nyquokt 3 16 Ireland Ireland NNP cord-287647-0nyquokt 3 17 date date NN cord-287647-0nyquokt 3 18 : : : cord-287647-0nyquokt 3 19 2019 2019 CD cord-287647-0nyquokt 3 20 - - SYM cord-287647-0nyquokt 3 21 10 10 CD cord-287647-0nyquokt 3 22 - - SYM cord-287647-0nyquokt 3 23 14 14 CD cord-287647-0nyquokt 3 24 journal journal NN cord-287647-0nyquokt 3 25 : : : cord-287647-0nyquokt 3 26 Viruses virus NNS cord-287647-0nyquokt 3 27 DOI DOI NNP cord-287647-0nyquokt 3 28 : : : cord-287647-0nyquokt 3 29 10.3390 10.3390 CD cord-287647-0nyquokt 3 30 / / SYM cord-287647-0nyquokt 3 31 v11100946 v11100946 NN cord-287647-0nyquokt 3 32 sha sha NNP cord-287647-0nyquokt 3 33 : : : cord-287647-0nyquokt 4 1 eee5a9068ade4c6776f189045115a90a5785e983 eee5a9068ade4c6776f189045115a90a5785e983 NNP cord-287647-0nyquokt 4 2 doc_id doc_id CD cord-287647-0nyquokt 4 3 : : : cord-287647-0nyquokt 5 1 287647 287647 CD cord-287647-0nyquokt 5 2 cord_uid cord_uid NNS cord-287647-0nyquokt 5 3 : : : cord-287647-0nyquokt 5 4 0nyquokt 0nyquokt CD cord-287647-0nyquokt 6 1 The the DT cord-287647-0nyquokt 6 2 objective objective NN cord-287647-0nyquokt 6 3 of of IN cord-287647-0nyquokt 6 4 this this DT cord-287647-0nyquokt 6 5 study study NN cord-287647-0nyquokt 6 6 was be VBD cord-287647-0nyquokt 6 7 to to TO cord-287647-0nyquokt 6 8 investigate investigate VB cord-287647-0nyquokt 6 9 the the DT cord-287647-0nyquokt 6 10 presence presence NN cord-287647-0nyquokt 6 11 of of IN cord-287647-0nyquokt 6 12 equine equine JJ cord-287647-0nyquokt 6 13 coronavirus coronavirus NN cord-287647-0nyquokt 6 14 ( ( -LRB- cord-287647-0nyquokt 6 15 ECoV ECoV NNP cord-287647-0nyquokt 6 16 ) ) -RRB- cord-287647-0nyquokt 6 17 in in IN cord-287647-0nyquokt 6 18 clinical clinical JJ cord-287647-0nyquokt 6 19 samples sample NNS cord-287647-0nyquokt 6 20 submitted submit VBN cord-287647-0nyquokt 6 21 to to IN cord-287647-0nyquokt 6 22 a a DT cord-287647-0nyquokt 6 23 diagnostic diagnostic JJ cord-287647-0nyquokt 6 24 laboratory laboratory NN cord-287647-0nyquokt 6 25 in in IN cord-287647-0nyquokt 6 26 Ireland Ireland NNP cord-287647-0nyquokt 6 27 . . . cord-287647-0nyquokt 7 1 A a DT cord-287647-0nyquokt 7 2 total total NN cord-287647-0nyquokt 7 3 of of IN cord-287647-0nyquokt 7 4 424 424 CD cord-287647-0nyquokt 7 5 clinical clinical JJ cord-287647-0nyquokt 7 6 samples sample NNS cord-287647-0nyquokt 7 7 were be VBD cord-287647-0nyquokt 7 8 examined examine VBN cord-287647-0nyquokt 7 9 from from IN cord-287647-0nyquokt 7 10 equids equid NNS cord-287647-0nyquokt 7 11 with with IN cord-287647-0nyquokt 7 12 enteric enteric JJ cord-287647-0nyquokt 7 13 disease disease NN cord-287647-0nyquokt 7 14 in in IN cord-287647-0nyquokt 7 15 24 24 CD cord-287647-0nyquokt 7 16 Irish irish JJ cord-287647-0nyquokt 7 17 counties county NNS cord-287647-0nyquokt 7 18 between between IN cord-287647-0nyquokt 7 19 2011 2011 CD cord-287647-0nyquokt 7 20 and and CC cord-287647-0nyquokt 7 21 2015 2015 CD cord-287647-0nyquokt 7 22 . . . cord-287647-0nyquokt 8 1 A a DT cord-287647-0nyquokt 8 2 real real JJ cord-287647-0nyquokt 8 3 - - HYPH cord-287647-0nyquokt 8 4 time time NN cord-287647-0nyquokt 8 5 reverse reverse NN cord-287647-0nyquokt 8 6 transcription transcription NN cord-287647-0nyquokt 8 7 polymerase polymerase NN cord-287647-0nyquokt 8 8 chain chain NN cord-287647-0nyquokt 8 9 reaction reaction NN cord-287647-0nyquokt 8 10 was be VBD cord-287647-0nyquokt 8 11 used use VBN cord-287647-0nyquokt 8 12 to to TO cord-287647-0nyquokt 8 13 detect detect VB cord-287647-0nyquokt 8 14 ECoV ECoV NNP cord-287647-0nyquokt 8 15 RNA RNA NNP cord-287647-0nyquokt 8 16 . . . cord-287647-0nyquokt 9 1 Nucleocapsid Nucleocapsid NNP cord-287647-0nyquokt 9 2 , , , cord-287647-0nyquokt 9 3 spike spike NN cord-287647-0nyquokt 9 4 and and CC cord-287647-0nyquokt 9 5 the the DT cord-287647-0nyquokt 9 6 region region NN cord-287647-0nyquokt 9 7 from from IN cord-287647-0nyquokt 9 8 the the DT cord-287647-0nyquokt 9 9 p4.7 p4.7 NN cord-287647-0nyquokt 9 10 to to IN cord-287647-0nyquokt 9 11 p12.7 p12.7 JJ cord-287647-0nyquokt 9 12 genes gene NNS cord-287647-0nyquokt 9 13 of of IN cord-287647-0nyquokt 9 14 positive positive JJ cord-287647-0nyquokt 9 15 samples sample NNS cord-287647-0nyquokt 9 16 were be VBD cord-287647-0nyquokt 9 17 sequenced sequence VBN cord-287647-0nyquokt 9 18 , , , cord-287647-0nyquokt 9 19 and and CC cord-287647-0nyquokt 9 20 sequence sequence NN cord-287647-0nyquokt 9 21 and and CC cord-287647-0nyquokt 9 22 phylogenetic phylogenetic JJ cord-287647-0nyquokt 9 23 analyses analysis NNS cord-287647-0nyquokt 9 24 were be VBD cord-287647-0nyquokt 9 25 conducted conduct VBN cord-287647-0nyquokt 9 26 . . . cord-287647-0nyquokt 10 1 Five five CD cord-287647-0nyquokt 10 2 samples sample NNS cord-287647-0nyquokt 10 3 ( ( -LRB- cord-287647-0nyquokt 10 4 1.2 1.2 CD cord-287647-0nyquokt 10 5 % % NN cord-287647-0nyquokt 10 6 ) ) -RRB- cord-287647-0nyquokt 10 7 collected collect VBN cord-287647-0nyquokt 10 8 in in IN cord-287647-0nyquokt 10 9 2011 2011 CD cord-287647-0nyquokt 10 10 and and CC cord-287647-0nyquokt 10 11 2013 2013 CD cord-287647-0nyquokt 10 12 tested test VBD cord-287647-0nyquokt 10 13 positive positive JJ cord-287647-0nyquokt 10 14 for for IN cord-287647-0nyquokt 10 15 ECoV. ECoV. VBG cord-287647-0nyquokt 10 16 Positive positive JJ cord-287647-0nyquokt 10 17 samples sample NNS cord-287647-0nyquokt 10 18 were be VBD cord-287647-0nyquokt 10 19 collected collect VBN cord-287647-0nyquokt 10 20 from from IN cord-287647-0nyquokt 10 21 adult adult NN cord-287647-0nyquokt 10 22 horses horse NNS cord-287647-0nyquokt 10 23 , , , cord-287647-0nyquokt 10 24 Thoroughbred thoroughbred JJ cord-287647-0nyquokt 10 25 foals foal NNS cord-287647-0nyquokt 10 26 and and CC cord-287647-0nyquokt 10 27 a a DT cord-287647-0nyquokt 10 28 donkey donkey NN cord-287647-0nyquokt 10 29 foal foal NN cord-287647-0nyquokt 10 30 . . . cord-287647-0nyquokt 11 1 Sequence sequence NN cord-287647-0nyquokt 11 2 and/or and/or CC cord-287647-0nyquokt 11 3 phylogenetic phylogenetic JJ cord-287647-0nyquokt 11 4 analysis analysis NN cord-287647-0nyquokt 11 5 showed show VBD cord-287647-0nyquokt 11 6 that that IN cord-287647-0nyquokt 11 7 nucleocapsid nucleocapsid NN cord-287647-0nyquokt 11 8 , , , cord-287647-0nyquokt 11 9 spike spike NN cord-287647-0nyquokt 11 10 and and CC cord-287647-0nyquokt 11 11 p12.7 p12.7 NN cord-287647-0nyquokt 11 12 genes gene NNS cord-287647-0nyquokt 11 13 were be VBD cord-287647-0nyquokt 11 14 highly highly RB cord-287647-0nyquokt 11 15 conserved conserve VBN cord-287647-0nyquokt 11 16 and and CC cord-287647-0nyquokt 11 17 were be VBD cord-287647-0nyquokt 11 18 closely closely RB cord-287647-0nyquokt 11 19 related relate VBN cord-287647-0nyquokt 11 20 to to IN cord-287647-0nyquokt 11 21 ECoVs ecovs CD cord-287647-0nyquokt 11 22 identified identify VBN cord-287647-0nyquokt 11 23 in in IN cord-287647-0nyquokt 11 24 other other JJ cord-287647-0nyquokt 11 25 countries country NNS cord-287647-0nyquokt 11 26 . . . cord-287647-0nyquokt 12 1 In in IN cord-287647-0nyquokt 12 2 contrast contrast NN cord-287647-0nyquokt 12 3 , , , cord-287647-0nyquokt 12 4 the the DT cord-287647-0nyquokt 12 5 region region NN cord-287647-0nyquokt 12 6 from from IN cord-287647-0nyquokt 12 7 p4.7 p4.7 NNP cord-287647-0nyquokt 12 8 and and CC cord-287647-0nyquokt 12 9 the the DT cord-287647-0nyquokt 12 10 non non JJ cord-287647-0nyquokt 12 11 - - JJ cord-287647-0nyquokt 12 12 coding code VBG cord-287647-0nyquokt 12 13 region region NN cord-287647-0nyquokt 12 14 following follow VBG cord-287647-0nyquokt 12 15 the the DT cord-287647-0nyquokt 12 16 p4.7 p4.7 JJ cord-287647-0nyquokt 12 17 gene gene NN cord-287647-0nyquokt 12 18 had have VBD cord-287647-0nyquokt 12 19 deletions deletion NNS cord-287647-0nyquokt 12 20 or or CC cord-287647-0nyquokt 12 21 insertions insertion NNS cord-287647-0nyquokt 12 22 . . . cord-287647-0nyquokt 13 1 The the DT cord-287647-0nyquokt 13 2 differences difference NNS cord-287647-0nyquokt 13 3 in in IN cord-287647-0nyquokt 13 4 the the DT cord-287647-0nyquokt 13 5 p4.7 p4.7 JJ cord-287647-0nyquokt 13 6 region region NN cord-287647-0nyquokt 13 7 between between IN cord-287647-0nyquokt 13 8 the the DT cord-287647-0nyquokt 13 9 Irish irish JJ cord-287647-0nyquokt 13 10 ECoVs ecovs NN cord-287647-0nyquokt 13 11 and and CC cord-287647-0nyquokt 13 12 other other JJ cord-287647-0nyquokt 13 13 ECoVs ecovs NN cord-287647-0nyquokt 13 14 indicated indicate VBD cord-287647-0nyquokt 13 15 that that IN cord-287647-0nyquokt 13 16 the the DT cord-287647-0nyquokt 13 17 Irish irish JJ cord-287647-0nyquokt 13 18 viruses virus NNS cord-287647-0nyquokt 13 19 were be VBD cord-287647-0nyquokt 13 20 distinguishable distinguishable JJ cord-287647-0nyquokt 13 21 from from IN cord-287647-0nyquokt 13 22 those those DT cord-287647-0nyquokt 13 23 circulating circulate VBG cord-287647-0nyquokt 13 24 in in IN cord-287647-0nyquokt 13 25 other other JJ cord-287647-0nyquokt 13 26 countries country NNS cord-287647-0nyquokt 13 27 . . . cord-287647-0nyquokt 14 1 This this DT cord-287647-0nyquokt 14 2 is be VBZ cord-287647-0nyquokt 14 3 the the DT cord-287647-0nyquokt 14 4 first first JJ cord-287647-0nyquokt 14 5 report report NN cord-287647-0nyquokt 14 6 of of IN cord-287647-0nyquokt 14 7 ECoV ECoV NNP cord-287647-0nyquokt 14 8 detected detect VBN cord-287647-0nyquokt 14 9 in in IN cord-287647-0nyquokt 14 10 both both DT cord-287647-0nyquokt 14 11 foals foal NNS cord-287647-0nyquokt 14 12 and and CC cord-287647-0nyquokt 14 13 adult adult NN cord-287647-0nyquokt 14 14 horses horse NNS cord-287647-0nyquokt 14 15 in in IN cord-287647-0nyquokt 14 16 Ireland Ireland NNP cord-287647-0nyquokt 14 17 . . . cord-287647-0nyquokt 15 1 Equine equine JJ cord-287647-0nyquokt 15 2 coronavirus coronavirus NN cord-287647-0nyquokt 15 3 ( ( -LRB- cord-287647-0nyquokt 15 4 ECoV ECoV NNP cord-287647-0nyquokt 15 5 ) ) -RRB- cord-287647-0nyquokt 15 6 is be VBZ cord-287647-0nyquokt 15 7 a a DT cord-287647-0nyquokt 15 8 positive positive JJ cord-287647-0nyquokt 15 9 - - HYPH cord-287647-0nyquokt 15 10 stranded strand VBN cord-287647-0nyquokt 15 11 RNA RNA NNP cord-287647-0nyquokt 15 12 virus virus NN cord-287647-0nyquokt 15 13 and and CC cord-287647-0nyquokt 15 14 belongs belong VBZ cord-287647-0nyquokt 15 15 to to IN cord-287647-0nyquokt 15 16 the the DT cord-287647-0nyquokt 15 17 species specie NNS cord-287647-0nyquokt 15 18 Betacoronavirus Betacoronavirus NNP cord-287647-0nyquokt 15 19 1 1 CD cord-287647-0nyquokt 15 20 in in IN cord-287647-0nyquokt 15 21 the the DT cord-287647-0nyquokt 15 22 genus genus NN cord-287647-0nyquokt 16 1 Betacoronavirus Betacoronavirus NNP cord-287647-0nyquokt 16 2 [ [ -LRB- cord-287647-0nyquokt 16 3 1 1 CD cord-287647-0nyquokt 16 4 , , , cord-287647-0nyquokt 16 5 2 2 CD cord-287647-0nyquokt 16 6 ] ] -RRB- cord-287647-0nyquokt 16 7 . . . cord-287647-0nyquokt 17 1 The the DT cord-287647-0nyquokt 17 2 clinical clinical JJ cord-287647-0nyquokt 17 3 signs sign NNS cord-287647-0nyquokt 17 4 associated associate VBN cord-287647-0nyquokt 17 5 with with IN cord-287647-0nyquokt 17 6 ECoV ecov NN cord-287647-0nyquokt 17 7 infection infection NN cord-287647-0nyquokt 17 8 during during IN cord-287647-0nyquokt 17 9 outbreaks outbreak NNS cord-287647-0nyquokt 17 10 in in IN cord-287647-0nyquokt 17 11 the the DT cord-287647-0nyquokt 17 12 USA USA NNP cord-287647-0nyquokt 17 13 [ [ -LRB- cord-287647-0nyquokt 17 14 3 3 CD cord-287647-0nyquokt 17 15 ] ] -RRB- cord-287647-0nyquokt 17 16 and and CC cord-287647-0nyquokt 17 17 Japan Japan NNP cord-287647-0nyquokt 17 18 [ [ -LRB- cord-287647-0nyquokt 17 19 4 4 CD cord-287647-0nyquokt 17 20 ] ] -RRB- cord-287647-0nyquokt 17 21 [ [ -LRB- cord-287647-0nyquokt 17 22 5 5 CD cord-287647-0nyquokt 17 23 ] ] -RRB- cord-287647-0nyquokt 17 24 [ [ -LRB- cord-287647-0nyquokt 17 25 6 6 CD cord-287647-0nyquokt 17 26 ] ] -RRB- cord-287647-0nyquokt 17 27 were be VBD cord-287647-0nyquokt 17 28 fever fever NN cord-287647-0nyquokt 17 29 , , , cord-287647-0nyquokt 17 30 anorexia anorexia NN cord-287647-0nyquokt 17 31 , , , cord-287647-0nyquokt 17 32 lethargy lethargy NN cord-287647-0nyquokt 17 33 and and CC cord-287647-0nyquokt 17 34 diarrhoea diarrhoea NN cord-287647-0nyquokt 17 35 . . . cord-287647-0nyquokt 18 1 The the DT cord-287647-0nyquokt 18 2 same same JJ cord-287647-0nyquokt 18 3 clinical clinical JJ cord-287647-0nyquokt 18 4 signs sign NNS cord-287647-0nyquokt 18 5 were be VBD cord-287647-0nyquokt 18 6 also also RB cord-287647-0nyquokt 18 7 recorded record VBN cord-287647-0nyquokt 18 8 in in IN cord-287647-0nyquokt 18 9 an an DT cord-287647-0nyquokt 18 10 experimental experimental JJ cord-287647-0nyquokt 18 11 challenge challenge NN cord-287647-0nyquokt 18 12 study study NN cord-287647-0nyquokt 18 13 using use VBG cord-287647-0nyquokt 18 14 Japanese japanese JJ cord-287647-0nyquokt 18 15 draft draft NN cord-287647-0nyquokt 18 16 horses horse NNS cord-287647-0nyquokt 18 17 [ [ -LRB- cord-287647-0nyquokt 18 18 7 7 CD cord-287647-0nyquokt 18 19 ] ] -RRB- cord-287647-0nyquokt 18 20 . . . cord-287647-0nyquokt 19 1 The the DT cord-287647-0nyquokt 19 2 main main JJ cord-287647-0nyquokt 19 3 transmission transmission NN cord-287647-0nyquokt 19 4 route route NN cord-287647-0nyquokt 19 5 is be VBZ cord-287647-0nyquokt 19 6 considered consider VBN cord-287647-0nyquokt 19 7 to to TO cord-287647-0nyquokt 19 8 be be VB cord-287647-0nyquokt 19 9 faecal faecal JJ cord-287647-0nyquokt 19 10 - - HYPH cord-287647-0nyquokt 19 11 oral oral JJ cord-287647-0nyquokt 19 12 [ [ -LRB- cord-287647-0nyquokt 19 13 7 7 CD cord-287647-0nyquokt 19 14 ] ] -RRB- cord-287647-0nyquokt 20 1 and and CC cord-287647-0nyquokt 20 2 ECoV ECoV NNP cord-287647-0nyquokt 20 3 is be VBZ cord-287647-0nyquokt 20 4 usually usually RB cord-287647-0nyquokt 20 5 detected detect VBN cord-287647-0nyquokt 20 6 in in IN cord-287647-0nyquokt 20 7 faecal faecal JJ cord-287647-0nyquokt 20 8 samples sample NNS cord-287647-0nyquokt 20 9 . . . cord-287647-0nyquokt 21 1 However however RB cord-287647-0nyquokt 21 2 , , , cord-287647-0nyquokt 21 3 the the DT cord-287647-0nyquokt 21 4 molecular molecular JJ cord-287647-0nyquokt 21 5 detection detection NN cord-287647-0nyquokt 21 6 of of IN cord-287647-0nyquokt 21 7 ECoV ECoV NNP cord-287647-0nyquokt 21 8 in in IN cord-287647-0nyquokt 21 9 faeces faece NNS cord-287647-0nyquokt 21 10 from from IN cord-287647-0nyquokt 21 11 horses horse NNS cord-287647-0nyquokt 21 12 with with IN cord-287647-0nyquokt 21 13 diarrhoea diarrhoea NN cord-287647-0nyquokt 21 14 , , , cord-287647-0nyquokt 21 15 does do VBZ cord-287647-0nyquokt 21 16 not not RB cord-287647-0nyquokt 21 17 prove prove VB cord-287647-0nyquokt 21 18 causation causation NN cord-287647-0nyquokt 21 19 . . . cord-287647-0nyquokt 22 1 Coronaviruses coronaviruse NNS cord-287647-0nyquokt 22 2 can can MD cord-287647-0nyquokt 22 3 cause cause VB cord-287647-0nyquokt 22 4 both both DT cord-287647-0nyquokt 22 5 enteric enteric JJ cord-287647-0nyquokt 22 6 and and CC cord-287647-0nyquokt 22 7 respiratory respiratory JJ cord-287647-0nyquokt 22 8 disease disease NN cord-287647-0nyquokt 22 9 in in IN cord-287647-0nyquokt 22 10 many many JJ cord-287647-0nyquokt 22 11 avian avian JJ cord-287647-0nyquokt 22 12 and and CC cord-287647-0nyquokt 22 13 mammalian mammalian JJ cord-287647-0nyquokt 22 14 species specie NNS cord-287647-0nyquokt 23 1 but but CC cord-287647-0nyquokt 23 2 ECoV ECoV NNP cord-287647-0nyquokt 23 3 is be VBZ cord-287647-0nyquokt 23 4 less less RBR cord-287647-0nyquokt 23 5 likely likely JJ cord-287647-0nyquokt 23 6 to to TO cord-287647-0nyquokt 23 7 be be VB cord-287647-0nyquokt 23 8 found find VBN cord-287647-0nyquokt 23 9 in in IN cord-287647-0nyquokt 23 10 respiratory respiratory JJ cord-287647-0nyquokt 23 11 secretions secretion NNS cord-287647-0nyquokt 23 12 than than IN cord-287647-0nyquokt 23 13 in in IN cord-287647-0nyquokt 23 14 faeces faece NNS cord-287647-0nyquokt 23 15 [ [ -LRB- cord-287647-0nyquokt 23 16 8 8 CD cord-287647-0nyquokt 23 17 , , , cord-287647-0nyquokt 23 18 9 9 CD cord-287647-0nyquokt 23 19 ] ] -RRB- cord-287647-0nyquokt 23 20 . . . cord-287647-0nyquokt 24 1 Both both DT cord-287647-0nyquokt 24 2 molecular molecular JJ cord-287647-0nyquokt 24 3 and and CC cord-287647-0nyquokt 24 4 seroepidemiology seroepidemiology NN cord-287647-0nyquokt 24 5 studies study NNS cord-287647-0nyquokt 24 6 suggest suggest VBP cord-287647-0nyquokt 24 7 that that IN cord-287647-0nyquokt 24 8 ECoV ECoV NNP cord-287647-0nyquokt 24 9 may may MD cord-287647-0nyquokt 24 10 be be VB cord-287647-0nyquokt 24 11 more more RBR cord-287647-0nyquokt 24 12 prevalent prevalent JJ cord-287647-0nyquokt 24 13 in in IN cord-287647-0nyquokt 24 14 the the DT cord-287647-0nyquokt 24 15 USA USA NNP cord-287647-0nyquokt 24 16 than than IN cord-287647-0nyquokt 24 17 in in IN cord-287647-0nyquokt 24 18 other other JJ cord-287647-0nyquokt 24 19 countries country NNS cord-287647-0nyquokt 24 20 [ [ -LRB- cord-287647-0nyquokt 24 21 10 10 CD cord-287647-0nyquokt 24 22 ] ] -RRB- cord-287647-0nyquokt 24 23 . . . cord-287647-0nyquokt 25 1 ECoV ECoV NNP cord-287647-0nyquokt 25 2 was be VBD cord-287647-0nyquokt 25 3 detected detect VBN cord-287647-0nyquokt 25 4 in in IN cord-287647-0nyquokt 25 5 samples sample NNS cord-287647-0nyquokt 25 6 collected collect VBN cord-287647-0nyquokt 25 7 from from IN cord-287647-0nyquokt 25 8 equids equid NNS cord-287647-0nyquokt 25 9 in in IN cord-287647-0nyquokt 25 10 48 48 CD cord-287647-0nyquokt 25 11 states state NNS cord-287647-0nyquokt 25 12 of of IN cord-287647-0nyquokt 25 13 the the DT cord-287647-0nyquokt 25 14 USA USA NNP cord-287647-0nyquokt 25 15 [ [ -LRB- cord-287647-0nyquokt 25 16 11 11 CD cord-287647-0nyquokt 25 17 ] ] -RRB- cord-287647-0nyquokt 25 18 . . . cord-287647-0nyquokt 26 1 In in IN cord-287647-0nyquokt 26 2 central central JJ cord-287647-0nyquokt 26 3 Kentucky Kentucky NNP cord-287647-0nyquokt 26 4 , , , cord-287647-0nyquokt 26 5 approximately approximately RB cord-287647-0nyquokt 26 6 30 30 CD cord-287647-0nyquokt 26 7 % % NN cord-287647-0nyquokt 26 8 of of IN cord-287647-0nyquokt 26 9 both both CC cord-287647-0nyquokt 26 10 healthy healthy JJ cord-287647-0nyquokt 26 11 and and CC cord-287647-0nyquokt 26 12 diarrheic diarrheic NNS cord-287647-0nyquokt 26 13 Thoroughbred thoroughbred JJ cord-287647-0nyquokt 26 14 foals foal NNS cord-287647-0nyquokt 26 15 were be VBD cord-287647-0nyquokt 26 16 infected infect VBN cord-287647-0nyquokt 26 17 with with IN cord-287647-0nyquokt 26 18 ECoV ECoV NNP cord-287647-0nyquokt 26 19 [ [ -LRB- cord-287647-0nyquokt 26 20 12 12 CD cord-287647-0nyquokt 26 21 ] ] -RRB- cord-287647-0nyquokt 26 22 . . . cord-287647-0nyquokt 27 1 All all DT cord-287647-0nyquokt 27 2 of of IN cord-287647-0nyquokt 27 3 the the DT cord-287647-0nyquokt 27 4 qPCR qpcr JJ cord-287647-0nyquokt 27 5 positive positive JJ cord-287647-0nyquokt 27 6 foals foal NNS cord-287647-0nyquokt 27 7 with with IN cord-287647-0nyquokt 27 8 diarrhoea diarrhoea NN cord-287647-0nyquokt 27 9 were be VBD cord-287647-0nyquokt 27 10 co co JJ cord-287647-0nyquokt 27 11 - - VBN cord-287647-0nyquokt 27 12 infected infect VBN cord-287647-0nyquokt 27 13 with with IN cord-287647-0nyquokt 27 14 other other JJ cord-287647-0nyquokt 27 15 pathogens pathogen NNS cord-287647-0nyquokt 27 16 such such JJ cord-287647-0nyquokt 27 17 as as IN cord-287647-0nyquokt 27 18 rotavirus rotavirus NN cord-287647-0nyquokt 27 19 or or CC cord-287647-0nyquokt 27 20 Clostridium clostridium NN cord-287647-0nyquokt 27 21 perfringens perfringen NNS cord-287647-0nyquokt 27 22 , , , cord-287647-0nyquokt 27 23 suggesting suggest VBG cord-287647-0nyquokt 27 24 that that IN cord-287647-0nyquokt 27 25 there there EX cord-287647-0nyquokt 27 26 was be VBD cord-287647-0nyquokt 27 27 potential potential JJ cord-287647-0nyquokt 27 28 for for IN cord-287647-0nyquokt 27 29 ECoV ECoV NNP cord-287647-0nyquokt 27 30 to to TO cord-287647-0nyquokt 27 31 be be VB cord-287647-0nyquokt 27 32 over over RB cord-287647-0nyquokt 27 33 - - HYPH cord-287647-0nyquokt 27 34 diagnosed diagnose VBN cord-287647-0nyquokt 27 35 as as IN cord-287647-0nyquokt 27 36 a a DT cord-287647-0nyquokt 27 37 causative causative JJ cord-287647-0nyquokt 27 38 agent agent NN cord-287647-0nyquokt 27 39 in in IN cord-287647-0nyquokt 27 40 complex complex JJ cord-287647-0nyquokt 27 41 diseases disease NNS cord-287647-0nyquokt 27 42 . . . cord-287647-0nyquokt 28 1 In in IN cord-287647-0nyquokt 28 2 contrast contrast NN cord-287647-0nyquokt 28 3 in in IN cord-287647-0nyquokt 28 4 Japan Japan NNP cord-287647-0nyquokt 28 5 , , , cord-287647-0nyquokt 28 6 although although IN cord-287647-0nyquokt 28 7 an an DT cord-287647-0nyquokt 28 8 outbreak outbreak NN cord-287647-0nyquokt 28 9 of of IN cord-287647-0nyquokt 28 10 diarrhoea diarrhoea NN cord-287647-0nyquokt 28 11 occurred occur VBD cord-287647-0nyquokt 28 12 among among IN cord-287647-0nyquokt 28 13 ECoV ECoV NNP cord-287647-0nyquokt 28 14 - - HYPH cord-287647-0nyquokt 28 15 infected infect VBN cord-287647-0nyquokt 28 16 draft draft NN cord-287647-0nyquokt 28 17 horses horse NNS cord-287647-0nyquokt 28 18 at at IN cord-287647-0nyquokt 28 19 one one CD cord-287647-0nyquokt 28 20 racecourse racecourse NN cord-287647-0nyquokt 28 21 [ [ -LRB- cord-287647-0nyquokt 28 22 4 4 CD cord-287647-0nyquokt 28 23 ] ] -RRB- cord-287647-0nyquokt 28 24 [ [ -LRB- cord-287647-0nyquokt 28 25 5 5 CD cord-287647-0nyquokt 28 26 ] ] -RRB- cord-287647-0nyquokt 28 27 [ [ -LRB- cord-287647-0nyquokt 28 28 6 6 CD cord-287647-0nyquokt 28 29 ] ] -RRB- cord-287647-0nyquokt 28 30 , , , cord-287647-0nyquokt 28 31 there there EX cord-287647-0nyquokt 28 32 have have VBP cord-287647-0nyquokt 28 33 been be VBN cord-287647-0nyquokt 28 34 no no DT cord-287647-0nyquokt 28 35 similar similar JJ cord-287647-0nyquokt 28 36 outbreaks outbreak NNS cord-287647-0nyquokt 28 37 subsequently subsequently RB cord-287647-0nyquokt 28 38 , , , cord-287647-0nyquokt 28 39 and and CC cord-287647-0nyquokt 28 40 all all DT cord-287647-0nyquokt 28 41 rectal rectal JJ cord-287647-0nyquokt 28 42 swabs swab NNS cord-287647-0nyquokt 28 43 collected collect VBN cord-287647-0nyquokt 28 44 from from IN cord-287647-0nyquokt 28 45 diarrheic diarrheic NNS cord-287647-0nyquokt 29 1 Thoroughbred thoroughbred JJ cord-287647-0nyquokt 29 2 foals foal NNS cord-287647-0nyquokt 29 3 were be VBD cord-287647-0nyquokt 29 4 negative negative JJ cord-287647-0nyquokt 29 5 . . . cord-287647-0nyquokt 30 1 Furthermore furthermore RB cord-287647-0nyquokt 30 2 , , , cord-287647-0nyquokt 30 3 only only RB cord-287647-0nyquokt 30 4 2.5 2.5 CD cord-287647-0nyquokt 30 5 % % NN cord-287647-0nyquokt 30 6 of of IN cord-287647-0nyquokt 30 7 the the DT cord-287647-0nyquokt 30 8 rectal rectal JJ cord-287647-0nyquokt 30 9 swabs swab NNS cord-287647-0nyquokt 30 10 collected collect VBN cord-287647-0nyquokt 30 11 from from IN cord-287647-0nyquokt 30 12 healthy healthy JJ cord-287647-0nyquokt 30 13 foals foal NNS cord-287647-0nyquokt 30 14 in in IN cord-287647-0nyquokt 30 15 the the DT cord-287647-0nyquokt 30 16 largest large JJS cord-287647-0nyquokt 30 17 Thoroughbred thoroughbred JJ cord-287647-0nyquokt 30 18 horse horse NN cord-287647-0nyquokt 30 19 breeding breeding NN cord-287647-0nyquokt 30 20 region region NN cord-287647-0nyquokt 30 21 in in IN cord-287647-0nyquokt 30 22 Japan Japan NNP cord-287647-0nyquokt 30 23 were be VBD cord-287647-0nyquokt 30 24 positive positive JJ cord-287647-0nyquokt 30 25 for for IN cord-287647-0nyquokt 30 26 ECoV ECoV NNP cord-287647-0nyquokt 30 27 [ [ -LRB- cord-287647-0nyquokt 30 28 13 13 CD cord-287647-0nyquokt 30 29 ] ] -RRB- cord-287647-0nyquokt 30 30 . . . cord-287647-0nyquokt 31 1 In in IN cord-287647-0nyquokt 31 2 France France NNP cord-287647-0nyquokt 31 3 , , , cord-287647-0nyquokt 31 4 2.8 2.8 CD cord-287647-0nyquokt 31 5 % % NN cord-287647-0nyquokt 31 6 of of IN cord-287647-0nyquokt 31 7 395 395 CD cord-287647-0nyquokt 31 8 faecal faecal JJ cord-287647-0nyquokt 31 9 samples sample NNS cord-287647-0nyquokt 31 10 and and CC cord-287647-0nyquokt 31 11 0.5 0.5 CD cord-287647-0nyquokt 31 12 % % NN cord-287647-0nyquokt 31 13 of of IN cord-287647-0nyquokt 31 14 200 200 CD cord-287647-0nyquokt 31 15 respiratory respiratory JJ cord-287647-0nyquokt 31 16 samples sample NNS cord-287647-0nyquokt 31 17 collected collect VBN cord-287647-0nyquokt 31 18 in in IN cord-287647-0nyquokt 31 19 58 58 CD cord-287647-0nyquokt 31 20 counties county NNS cord-287647-0nyquokt 31 21 tested test VBD cord-287647-0nyquokt 31 22 positive positive JJ cord-287647-0nyquokt 31 23 for for IN cord-287647-0nyquokt 31 24 ECoV ECoV NNP cord-287647-0nyquokt 31 25 [ [ -LRB- cord-287647-0nyquokt 31 26 9 9 CD cord-287647-0nyquokt 31 27 ] ] -RRB- cord-287647-0nyquokt 31 28 . . . cord-287647-0nyquokt 32 1 Similar similar JJ cord-287647-0nyquokt 32 2 to to IN cord-287647-0nyquokt 32 3 the the DT cord-287647-0nyquokt 32 4 reports report NNS cord-287647-0nyquokt 32 5 from from IN cord-287647-0nyquokt 32 6 Japan Japan NNP cord-287647-0nyquokt 32 7 and and CC cord-287647-0nyquokt 32 8 France France NNP cord-287647-0nyquokt 32 9 , , , cord-287647-0nyquokt 32 10 a a DT cord-287647-0nyquokt 32 11 low low JJ cord-287647-0nyquokt 32 12 prevalence prevalence NN cord-287647-0nyquokt 32 13 of of IN cord-287647-0nyquokt 32 14 ECoV ECoV NNP cord-287647-0nyquokt 32 15 was be VBD cord-287647-0nyquokt 32 16 also also RB cord-287647-0nyquokt 32 17 observed observe VBN cord-287647-0nyquokt 32 18 in in IN cord-287647-0nyquokt 32 19 the the DT cord-287647-0nyquokt 32 20 UK UK NNP cord-287647-0nyquokt 32 21 [ [ -LRB- cord-287647-0nyquokt 32 22 14 14 CD cord-287647-0nyquokt 32 23 ] ] -RRB- cord-287647-0nyquokt 32 24 , , , cord-287647-0nyquokt 32 25 Saudi Saudi NNP cord-287647-0nyquokt 32 26 Arabia Arabia NNP cord-287647-0nyquokt 32 27 and and CC cord-287647-0nyquokt 32 28 Oman Oman NNP cord-287647-0nyquokt 32 29 [ [ -LRB- cord-287647-0nyquokt 32 30 15 15 CD cord-287647-0nyquokt 32 31 ] ] -RRB- cord-287647-0nyquokt 32 32 . . . cord-287647-0nyquokt 33 1 The the DT cord-287647-0nyquokt 33 2 objective objective NN cord-287647-0nyquokt 33 3 of of IN cord-287647-0nyquokt 33 4 this this DT cord-287647-0nyquokt 33 5 study study NN cord-287647-0nyquokt 33 6 was be VBD cord-287647-0nyquokt 33 7 to to TO cord-287647-0nyquokt 33 8 investigate investigate VB cord-287647-0nyquokt 33 9 the the DT cord-287647-0nyquokt 33 10 presence presence NN cord-287647-0nyquokt 33 11 of of IN cord-287647-0nyquokt 33 12 ECoV ECoV NNP cord-287647-0nyquokt 33 13 in in IN cord-287647-0nyquokt 33 14 clinical clinical JJ cord-287647-0nyquokt 33 15 samples sample NNS cord-287647-0nyquokt 33 16 submitted submit VBN cord-287647-0nyquokt 33 17 to to IN cord-287647-0nyquokt 33 18 a a DT cord-287647-0nyquokt 33 19 diagnostic diagnostic JJ cord-287647-0nyquokt 33 20 laboratory laboratory NN cord-287647-0nyquokt 33 21 in in IN cord-287647-0nyquokt 33 22 Ireland Ireland NNP cord-287647-0nyquokt 33 23 . . . cord-287647-0nyquokt 34 1 The the DT cord-287647-0nyquokt 34 2 samples sample NNS cord-287647-0nyquokt 34 3 were be VBD cord-287647-0nyquokt 34 4 tested test VBN cord-287647-0nyquokt 34 5 by by IN cord-287647-0nyquokt 34 6 real real JJ cord-287647-0nyquokt 34 7 - - HYPH cord-287647-0nyquokt 34 8 time time NN cord-287647-0nyquokt 34 9 reverse reverse NN cord-287647-0nyquokt 34 10 transcription transcription NN cord-287647-0nyquokt 34 11 polymerase polymerase NN cord-287647-0nyquokt 34 12 chain chain NN cord-287647-0nyquokt 34 13 reaction reaction NN cord-287647-0nyquokt 34 14 ( ( -LRB- cord-287647-0nyquokt 34 15 rRT rRT NNP cord-287647-0nyquokt 34 16 - - HYPH cord-287647-0nyquokt 34 17 PCR PCR NNP cord-287647-0nyquokt 34 18 ) ) -RRB- cord-287647-0nyquokt 34 19 as as IN cord-287647-0nyquokt 34 20 it -PRON- PRP cord-287647-0nyquokt 34 21 has have VBZ cord-287647-0nyquokt 34 22 been be VBN cord-287647-0nyquokt 34 23 shown show VBN cord-287647-0nyquokt 34 24 to to TO cord-287647-0nyquokt 34 25 be be VB cord-287647-0nyquokt 34 26 the the DT cord-287647-0nyquokt 34 27 most most RBS cord-287647-0nyquokt 34 28 sensitive sensitive JJ cord-287647-0nyquokt 34 29 diagnostic diagnostic JJ cord-287647-0nyquokt 34 30 method method NN cord-287647-0nyquokt 34 31 for for IN cord-287647-0nyquokt 34 32 ECoV ECoV NNP cord-287647-0nyquokt 34 33 [ [ -LRB- cord-287647-0nyquokt 34 34 16 16 CD cord-287647-0nyquokt 34 35 ] ] -RRB- cord-287647-0nyquokt 34 36 and and CC cord-287647-0nyquokt 34 37 is be VBZ cord-287647-0nyquokt 34 38 routinely routinely RB cord-287647-0nyquokt 34 39 employed employ VBN cord-287647-0nyquokt 34 40 as as IN cord-287647-0nyquokt 34 41 an an DT cord-287647-0nyquokt 34 42 alternative alternative NN cord-287647-0nyquokt 34 43 to to IN cord-287647-0nyquokt 34 44 virus virus NN cord-287647-0nyquokt 34 45 isolation isolation NN cord-287647-0nyquokt 34 46 in in IN cord-287647-0nyquokt 34 47 diagnostic diagnostic JJ cord-287647-0nyquokt 34 48 laboratories laboratory NNS cord-287647-0nyquokt 34 49 worldwide worldwide RB cord-287647-0nyquokt 34 50 , , , cord-287647-0nyquokt 34 51 both both DT cord-287647-0nyquokt 34 52 for for IN cord-287647-0nyquokt 34 53 timely timely JJ cord-287647-0nyquokt 34 54 diagnosis diagnosis NN cord-287647-0nyquokt 34 55 and and CC cord-287647-0nyquokt 34 56 in in IN cord-287647-0nyquokt 34 57 epidemiological epidemiological JJ cord-287647-0nyquokt 34 58 studies study NNS cord-287647-0nyquokt 34 59 [ [ -LRB- cord-287647-0nyquokt 34 60 9 9 CD cord-287647-0nyquokt 34 61 , , , cord-287647-0nyquokt 34 62 10 10 CD cord-287647-0nyquokt 34 63 ] ] -RRB- cord-287647-0nyquokt 34 64 . . . cord-287647-0nyquokt 35 1 Virus virus NN cord-287647-0nyquokt 35 2 isolation isolation NN cord-287647-0nyquokt 35 3 and and CC cord-287647-0nyquokt 35 4 biological biological JJ cord-287647-0nyquokt 35 5 characterisation characterisation NN cord-287647-0nyquokt 35 6 were be VBD cord-287647-0nyquokt 35 7 beyond beyond IN cord-287647-0nyquokt 35 8 the the DT cord-287647-0nyquokt 35 9 capacity capacity NN cord-287647-0nyquokt 35 10 of of IN cord-287647-0nyquokt 35 11 this this DT cord-287647-0nyquokt 35 12 study study NN cord-287647-0nyquokt 35 13 , , , cord-287647-0nyquokt 35 14 which which WDT cord-287647-0nyquokt 35 15 was be VBD cord-287647-0nyquokt 35 16 similar similar JJ cord-287647-0nyquokt 35 17 in in IN cord-287647-0nyquokt 35 18 scope scope NN cord-287647-0nyquokt 35 19 to to IN cord-287647-0nyquokt 35 20 that that DT cord-287647-0nyquokt 35 21 of of IN cord-287647-0nyquokt 35 22 the the DT cord-287647-0nyquokt 35 23 studies study NNS cord-287647-0nyquokt 35 24 in in IN cord-287647-0nyquokt 35 25 horse horse NN cord-287647-0nyquokt 35 26 populations population NNS cord-287647-0nyquokt 35 27 in in IN cord-287647-0nyquokt 35 28 the the DT cord-287647-0nyquokt 35 29 USA USA NNP cord-287647-0nyquokt 35 30 , , , cord-287647-0nyquokt 35 31 Europe Europe NNP cord-287647-0nyquokt 35 32 and and CC cord-287647-0nyquokt 35 33 Asia Asia NNP cord-287647-0nyquokt 35 34 [ [ -LRB- cord-287647-0nyquokt 35 35 8 8 CD cord-287647-0nyquokt 35 36 , , , cord-287647-0nyquokt 35 37 9 9 CD cord-287647-0nyquokt 35 38 , , , cord-287647-0nyquokt 35 39 13 13 CD cord-287647-0nyquokt 35 40 , , , cord-287647-0nyquokt 35 41 14 14 CD cord-287647-0nyquokt 35 42 ] ] -RRB- cord-287647-0nyquokt 35 43 . . . cord-287647-0nyquokt 36 1 The the DT cord-287647-0nyquokt 36 2 rRT rrt CD cord-287647-0nyquokt 36 3 - - HYPH cord-287647-0nyquokt 36 4 PCR pcr NN cord-287647-0nyquokt 36 5 assay assay NN cord-287647-0nyquokt 36 6 was be VBD cord-287647-0nyquokt 36 7 performed perform VBN cord-287647-0nyquokt 36 8 as as IN cord-287647-0nyquokt 36 9 previously previously RB cord-287647-0nyquokt 36 10 described describe VBN cord-287647-0nyquokt 36 11 using use VBG cord-287647-0nyquokt 36 12 a a DT cord-287647-0nyquokt 36 13 primer primer NN cord-287647-0nyquokt 36 14 set set NN cord-287647-0nyquokt 36 15 targeting target VBG cord-287647-0nyquokt 36 16 the the DT cord-287647-0nyquokt 36 17 nucleocapsid nucleocapsid NN cord-287647-0nyquokt 36 18 ( ( -LRB- cord-287647-0nyquokt 36 19 N N NNP cord-287647-0nyquokt 36 20 ) ) -RRB- cord-287647-0nyquokt 36 21 gene gene NN cord-287647-0nyquokt 36 22 ( ( -LRB- cord-287647-0nyquokt 36 23 ECoV-380f ecov-380f RB cord-287647-0nyquokt 36 24 , , , cord-287647-0nyquokt 36 25 ECoV-522r ecov-522r NN cord-287647-0nyquokt 36 26 and and CC cord-287647-0nyquokt 36 27 ECoV-436p ECoV-436p NNS cord-287647-0nyquokt 36 28 ) ) -RRB- cord-287647-0nyquokt 37 1 [ [ -LRB- cord-287647-0nyquokt 37 2 3 3 CD cord-287647-0nyquokt 37 3 ] ] -RRB- cord-287647-0nyquokt 37 4 ( ( -LRB- cord-287647-0nyquokt 37 5 Table table NN cord-287647-0nyquokt 37 6 1 1 CD cord-287647-0nyquokt 37 7 ) ) -RRB- cord-287647-0nyquokt 37 8 and and CC cord-287647-0nyquokt 37 9 AgPath AgPath NNP cord-287647-0nyquokt 37 10 - - HYPH cord-287647-0nyquokt 37 11 ID ID NNP cord-287647-0nyquokt 37 12 One one CD cord-287647-0nyquokt 37 13 - - HYPH cord-287647-0nyquokt 37 14 Step Step NNP cord-287647-0nyquokt 37 15 RT RT NNP cord-287647-0nyquokt 37 16 - - HYPH cord-287647-0nyquokt 37 17 PCR PCR NNP cord-287647-0nyquokt 37 18 Kit kit NN cord-287647-0nyquokt 37 19 ( ( -LRB- cord-287647-0nyquokt 37 20 Thermo Thermo NNP cord-287647-0nyquokt 37 21 Fisher Fisher NNP cord-287647-0nyquokt 37 22 Scientific Scientific NNP cord-287647-0nyquokt 37 23 , , , cord-287647-0nyquokt 37 24 MA MA NNP cord-287647-0nyquokt 37 25 , , , cord-287647-0nyquokt 37 26 USA USA NNP cord-287647-0nyquokt 37 27 ) ) -RRB- cord-287647-0nyquokt 38 1 according accord VBG cord-287647-0nyquokt 38 2 to to IN cord-287647-0nyquokt 38 3 the the DT cord-287647-0nyquokt 38 4 manufacturer manufacturer NN cord-287647-0nyquokt 38 5 's 's POS cord-287647-0nyquokt 38 6 instructions instruction NNS cord-287647-0nyquokt 38 7 . . . cord-287647-0nyquokt 39 1 To to TO cord-287647-0nyquokt 39 2 prove prove VB cord-287647-0nyquokt 39 3 that that IN cord-287647-0nyquokt 39 4 the the DT cord-287647-0nyquokt 39 5 extraction extraction NN cord-287647-0nyquokt 39 6 was be VBD cord-287647-0nyquokt 39 7 successful successful JJ cord-287647-0nyquokt 39 8 and and CC cord-287647-0nyquokt 39 9 that that IN cord-287647-0nyquokt 39 10 there there EX cord-287647-0nyquokt 39 11 was be VBD cord-287647-0nyquokt 39 12 no no DT cord-287647-0nyquokt 39 13 inhibition inhibition NN cord-287647-0nyquokt 39 14 during during IN cord-287647-0nyquokt 39 15 rRT rrt CD cord-287647-0nyquokt 39 16 - - HYPH cord-287647-0nyquokt 39 17 PCR pcr NN cord-287647-0nyquokt 39 18 amplification amplification NN cord-287647-0nyquokt 39 19 , , , cord-287647-0nyquokt 39 20 an an DT cord-287647-0nyquokt 39 21 internal internal JJ cord-287647-0nyquokt 39 22 positive positive JJ cord-287647-0nyquokt 39 23 control control NN cord-287647-0nyquokt 39 24 primer primer NN cord-287647-0nyquokt 39 25 / / SYM cord-287647-0nyquokt 39 26 probe probe NN cord-287647-0nyquokt 39 27 ( ( -LRB- cord-287647-0nyquokt 39 28 PrimerDesign PrimerDesign NNP cord-287647-0nyquokt 39 29 , , , cord-287647-0nyquokt 39 30 Southampton Southampton NNP cord-287647-0nyquokt 39 31 , , , cord-287647-0nyquokt 39 32 UK UK NNP cord-287647-0nyquokt 39 33 ) ) -RRB- cord-287647-0nyquokt 39 34 was be VBD cord-287647-0nyquokt 39 35 added add VBN cord-287647-0nyquokt 39 36 to to IN cord-287647-0nyquokt 39 37 the the DT cord-287647-0nyquokt 39 38 master master NN cord-287647-0nyquokt 39 39 mix mix NN cord-287647-0nyquokt 39 40 . . . cord-287647-0nyquokt 40 1 Thermal thermal JJ cord-287647-0nyquokt 40 2 cycling cycling NN cord-287647-0nyquokt 40 3 conditions condition NNS cord-287647-0nyquokt 40 4 were be VBD cord-287647-0nyquokt 40 5 ; ; : cord-287647-0nyquokt 40 6 48 48 CD cord-287647-0nyquokt 40 7 • • NNS cord-287647-0nyquokt 40 8 C C NNP cord-287647-0nyquokt 40 9 for for IN cord-287647-0nyquokt 40 10 10 10 CD cord-287647-0nyquokt 40 11 min min NN cord-287647-0nyquokt 40 12 and and CC cord-287647-0nyquokt 40 13 95 95 CD cord-287647-0nyquokt 41 1 • • NNP cord-287647-0nyquokt 42 1 C C NNP cord-287647-0nyquokt 42 2 for for IN cord-287647-0nyquokt 42 3 10 10 CD cord-287647-0nyquokt 42 4 min min NN cord-287647-0nyquokt 42 5 , , , cord-287647-0nyquokt 42 6 followed follow VBN cord-287647-0nyquokt 42 7 by by IN cord-287647-0nyquokt 42 8 40 40 CD cord-287647-0nyquokt 42 9 cycles cycle NNS cord-287647-0nyquokt 42 10 at at IN cord-287647-0nyquokt 42 11 94 94 CD cord-287647-0nyquokt 43 1 • • NNP cord-287647-0nyquokt 43 2 C C NNP cord-287647-0nyquokt 43 3 for for IN cord-287647-0nyquokt 43 4 15 15 CD cord-287647-0nyquokt 43 5 s s NNS cord-287647-0nyquokt 43 6 and and CC cord-287647-0nyquokt 44 1 60 60 CD cord-287647-0nyquokt 45 1 • • NNP cord-287647-0nyquokt 46 1 C C NNP cord-287647-0nyquokt 46 2 for for IN cord-287647-0nyquokt 46 3 45 45 CD cord-287647-0nyquokt 46 4 s. s. NN cord-287647-0nyquokt 47 1 The the DT cord-287647-0nyquokt 47 2 SuperScript SuperScript NNP cord-287647-0nyquokt 47 3 III III NNP cord-287647-0nyquokt 47 4 One one CD cord-287647-0nyquokt 47 5 - - HYPH cord-287647-0nyquokt 47 6 Step Step NNP cord-287647-0nyquokt 47 7 RT RT NNP cord-287647-0nyquokt 47 8 - - HYPH cord-287647-0nyquokt 47 9 PCR PCR NNP cord-287647-0nyquokt 47 10 System System NNP cord-287647-0nyquokt 47 11 with with IN cord-287647-0nyquokt 47 12 Platinum Platinum NNP cord-287647-0nyquokt 48 1 Taq Taq NNP cord-287647-0nyquokt 48 2 High high JJ cord-287647-0nyquokt 48 3 Fidelity Fidelity NNP cord-287647-0nyquokt 49 1 ( ( -LRB- cord-287647-0nyquokt 49 2 Thermo Thermo NNP cord-287647-0nyquokt 49 3 Fisher Fisher NNP cord-287647-0nyquokt 49 4 Scientific Scientific NNP cord-287647-0nyquokt 49 5 , , , cord-287647-0nyquokt 49 6 MA MA NNP cord-287647-0nyquokt 49 7 , , , cord-287647-0nyquokt 49 8 USA USA NNP cord-287647-0nyquokt 49 9 ) ) -RRB- cord-287647-0nyquokt 49 10 was be VBD cord-287647-0nyquokt 49 11 used use VBN cord-287647-0nyquokt 49 12 for for IN cord-287647-0nyquokt 49 13 sequencing sequence VBG cord-287647-0nyquokt 49 14 analysis analysis NN cord-287647-0nyquokt 49 15 of of IN cord-287647-0nyquokt 49 16 two two CD cord-287647-0nyquokt 49 17 of of IN cord-287647-0nyquokt 49 18 the the DT cord-287647-0nyquokt 49 19 five five CD cord-287647-0nyquokt 49 20 ECoV ecov NN cord-287647-0nyquokt 49 21 samples sample NNS cord-287647-0nyquokt 49 22 identified identify VBN cord-287647-0nyquokt 49 23 . . . cord-287647-0nyquokt 50 1 There there EX cord-287647-0nyquokt 50 2 was be VBD cord-287647-0nyquokt 50 3 inadequate inadequate JJ cord-287647-0nyquokt 50 4 viral viral JJ cord-287647-0nyquokt 50 5 nucleic nucleic JJ cord-287647-0nyquokt 50 6 acid acid NN cord-287647-0nyquokt 50 7 in in IN cord-287647-0nyquokt 50 8 the the DT cord-287647-0nyquokt 50 9 other other JJ cord-287647-0nyquokt 50 10 three three CD cord-287647-0nyquokt 50 11 samples sample NNS cord-287647-0nyquokt 50 12 for for IN cord-287647-0nyquokt 50 13 sequencing sequencing NN cord-287647-0nyquokt 50 14 . . . cord-287647-0nyquokt 51 1 The the DT cord-287647-0nyquokt 51 2 primer primer NN cord-287647-0nyquokt 51 3 sets set NNS cord-287647-0nyquokt 51 4 used use VBN cord-287647-0nyquokt 51 5 to to TO cord-287647-0nyquokt 51 6 amplify amplify VB cord-287647-0nyquokt 51 7 the the DT cord-287647-0nyquokt 51 8 nucleocapsid nucleocapsid NN cord-287647-0nyquokt 51 9 ( ( -LRB- cord-287647-0nyquokt 51 10 N N NNP cord-287647-0nyquokt 51 11 ) ) -RRB- cord-287647-0nyquokt 51 12 gene gene NN cord-287647-0nyquokt 51 13 [ [ -LRB- cord-287647-0nyquokt 51 14 4 4 CD cord-287647-0nyquokt 51 15 ] ] -RRB- cord-287647-0nyquokt 51 16 , , , cord-287647-0nyquokt 51 17 the the DT cord-287647-0nyquokt 51 18 partial partial JJ cord-287647-0nyquokt 51 19 spike spike NN cord-287647-0nyquokt 51 20 ( ( -LRB- cord-287647-0nyquokt 51 21 S s NN cord-287647-0nyquokt 51 22 ) ) -RRB- cord-287647-0nyquokt 51 23 gene gene NN cord-287647-0nyquokt 51 24 [ [ -LRB- cord-287647-0nyquokt 51 25 9 9 CD cord-287647-0nyquokt 51 26 ] ] -RRB- cord-287647-0nyquokt 51 27 , , , cord-287647-0nyquokt 51 28 and and CC cord-287647-0nyquokt 51 29 the the DT cord-287647-0nyquokt 51 30 region region NN cord-287647-0nyquokt 51 31 from from IN cord-287647-0nyquokt 51 32 the the DT cord-287647-0nyquokt 51 33 p4.7 p4.7 NN cord-287647-0nyquokt 51 34 to to IN cord-287647-0nyquokt 51 35 p12.7 p12.7 JJ cord-287647-0nyquokt 51 36 genes gene NNS cord-287647-0nyquokt 51 37 of of IN cord-287647-0nyquokt 51 38 non non JJ cord-287647-0nyquokt 51 39 - - JJ cord-287647-0nyquokt 51 40 structural structural JJ cord-287647-0nyquokt 51 41 proteins protein NNS cord-287647-0nyquokt 51 42 ( ( -LRB- cord-287647-0nyquokt 51 43 Oue Oue NNP cord-287647-0nyquokt 51 44 , , , cord-287647-0nyquokt 51 45 personal personal JJ cord-287647-0nyquokt 51 46 communication communication NN cord-287647-0nyquokt 51 47 ) ) -RRB- cord-287647-0nyquokt 51 48 are be VBP cord-287647-0nyquokt 51 49 shown show VBN cord-287647-0nyquokt 51 50 in in IN cord-287647-0nyquokt 51 51 Table Table NNP cord-287647-0nyquokt 51 52 1 1 CD cord-287647-0nyquokt 51 53 . . . cord-287647-0nyquokt 52 1 The the DT cord-287647-0nyquokt 52 2 RT RT NNP cord-287647-0nyquokt 52 3 - - HYPH cord-287647-0nyquokt 52 4 PCR PCR NNP cord-287647-0nyquokt 52 5 products product NNS cord-287647-0nyquokt 52 6 were be VBD cord-287647-0nyquokt 52 7 sequenced sequence VBN cord-287647-0nyquokt 52 8 commercially commercially RB cord-287647-0nyquokt 52 9 by by IN cord-287647-0nyquokt 52 10 GATC GATC NNP cord-287647-0nyquokt 52 11 Biotech Biotech NNP cord-287647-0nyquokt 52 12 ( ( -LRB- cord-287647-0nyquokt 52 13 Cologne Cologne NNP cord-287647-0nyquokt 52 14 , , , cord-287647-0nyquokt 52 15 Germany Germany NNP cord-287647-0nyquokt 52 16 ) ) -RRB- cord-287647-0nyquokt 52 17 . . . cord-287647-0nyquokt 53 1 Sequence sequence NN cord-287647-0nyquokt 53 2 analysis analysis NN cord-287647-0nyquokt 53 3 was be VBD cord-287647-0nyquokt 53 4 performed perform VBN cord-287647-0nyquokt 53 5 using use VBG cord-287647-0nyquokt 53 6 the the DT cord-287647-0nyquokt 53 7 BLAST blast NN cord-287647-0nyquokt 53 8 and and CC cord-287647-0nyquokt 53 9 CLUSTALW CLUSTALW NNP cord-287647-0nyquokt 53 10 programs program NNS cord-287647-0nyquokt 53 11 , , , cord-287647-0nyquokt 53 12 and and CC cord-287647-0nyquokt 53 13 Vector Vector NNP cord-287647-0nyquokt 53 14 NTI NTI NNP cord-287647-0nyquokt 53 15 Advance Advance NNP cord-287647-0nyquokt 53 16 11.5 11.5 CD cord-287647-0nyquokt 53 17 software software NN cord-287647-0nyquokt 53 18 ( ( -LRB- cord-287647-0nyquokt 53 19 Thermo Thermo NNP cord-287647-0nyquokt 53 20 Fisher Fisher NNP cord-287647-0nyquokt 53 21 Scientific Scientific NNP cord-287647-0nyquokt 53 22 , , , cord-287647-0nyquokt 53 23 MA MA NNP cord-287647-0nyquokt 53 24 , , , cord-287647-0nyquokt 53 25 USA USA NNP cord-287647-0nyquokt 53 26 ) ) -RRB- cord-287647-0nyquokt 53 27 . . . cord-287647-0nyquokt 54 1 Phylogenetic phylogenetic JJ cord-287647-0nyquokt 54 2 analysis analysis NN cord-287647-0nyquokt 54 3 of of IN cord-287647-0nyquokt 54 4 nucleotide nucleotide JJ cord-287647-0nyquokt 54 5 sequences sequence NNS cord-287647-0nyquokt 54 6 was be VBD cord-287647-0nyquokt 54 7 conducted conduct VBN cord-287647-0nyquokt 54 8 with with IN cord-287647-0nyquokt 54 9 MEGA MEGA NNP cord-287647-0nyquokt 54 10 software software NN cord-287647-0nyquokt 54 11 Version version NN cord-287647-0nyquokt 54 12 5.2 5.2 CD cord-287647-0nyquokt 54 13 [ [ -LRB- cord-287647-0nyquokt 54 14 17 17 CD cord-287647-0nyquokt 54 15 ] ] -RRB- cord-287647-0nyquokt 54 16 . . . cord-287647-0nyquokt 55 1 A a DT cord-287647-0nyquokt 55 2 phylogenetic phylogenetic JJ cord-287647-0nyquokt 55 3 tree tree NN cord-287647-0nyquokt 55 4 was be VBD cord-287647-0nyquokt 55 5 constructed construct VBN cord-287647-0nyquokt 55 6 based base VBN cord-287647-0nyquokt 55 7 on on IN cord-287647-0nyquokt 55 8 nucleotide nucleotide JJ cord-287647-0nyquokt 55 9 sequences sequence NNS cord-287647-0nyquokt 55 10 of of IN cord-287647-0nyquokt 55 11 the the DT cord-287647-0nyquokt 55 12 K2+G K2+G NNS cord-287647-0nyquokt 55 13 ( ( -LRB- cord-287647-0nyquokt 55 14 N n CD cord-287647-0nyquokt 55 15 gene gene NN cord-287647-0nyquokt 55 16 ) ) -RRB- cord-287647-0nyquokt 55 17 and and CC cord-287647-0nyquokt 55 18 TN93 TN93 NNP cord-287647-0nyquokt 55 19 ( ( -LRB- cord-287647-0nyquokt 55 20 S S NNP cord-287647-0nyquokt 55 21 gene gene NN cord-287647-0nyquokt 55 22 ) ) -RRB- cord-287647-0nyquokt 55 23 using use VBG cord-287647-0nyquokt 55 24 the the DT cord-287647-0nyquokt 55 25 maximum maximum JJ cord-287647-0nyquokt 55 26 likelihood likelihood NN cord-287647-0nyquokt 55 27 method method NN cord-287647-0nyquokt 55 28 . . . cord-287647-0nyquokt 56 1 MEGA mega JJ cord-287647-0nyquokt 56 2 software software NN cord-287647-0nyquokt 56 3 was be VBD cord-287647-0nyquokt 56 4 used use VBN cord-287647-0nyquokt 56 5 to to TO cord-287647-0nyquokt 56 6 select select VB cord-287647-0nyquokt 56 7 the the DT cord-287647-0nyquokt 56 8 optimal optimal JJ cord-287647-0nyquokt 56 9 substitution substitution NN cord-287647-0nyquokt 56 10 models model NNS cord-287647-0nyquokt 56 11 . . . cord-287647-0nyquokt 57 1 Statistical statistical JJ cord-287647-0nyquokt 57 2 analysis analysis NN cord-287647-0nyquokt 57 3 of of IN cord-287647-0nyquokt 57 4 the the DT cord-287647-0nyquokt 57 5 tree tree NN cord-287647-0nyquokt 57 6 was be VBD cord-287647-0nyquokt 57 7 performed perform VBN cord-287647-0nyquokt 57 8 with with IN cord-287647-0nyquokt 57 9 the the DT cord-287647-0nyquokt 57 10 bootstrap bootstrap NN cord-287647-0nyquokt 57 11 test test NN cord-287647-0nyquokt 57 12 ( ( -LRB- cord-287647-0nyquokt 57 13 1000 1000 CD cord-287647-0nyquokt 57 14 replicates replicate VBZ cord-287647-0nyquokt 57 15 ) ) -RRB- cord-287647-0nyquokt 57 16 for for IN cord-287647-0nyquokt 57 17 multiple multiple JJ cord-287647-0nyquokt 57 18 alignments alignment NNS cord-287647-0nyquokt 57 19 . . . cord-287647-0nyquokt 58 1 The the DT cord-287647-0nyquokt 58 2 complete complete JJ cord-287647-0nyquokt 58 3 genome genome NN cord-287647-0nyquokt 58 4 sequences sequence NNS cord-287647-0nyquokt 58 5 of of IN cord-287647-0nyquokt 58 6 NC99 NC99 NNP cord-287647-0nyquokt 58 7 ( ( -LRB- cord-287647-0nyquokt 58 8 EF446615 ef446615 NN cord-287647-0nyquokt 58 9 ) ) -RRB- cord-287647-0nyquokt 58 10 [ [ -LRB- cord-287647-0nyquokt 58 11 2 2 CD cord-287647-0nyquokt 58 12 ] ] -RRB- cord-287647-0nyquokt 58 13 , , , cord-287647-0nyquokt 58 14 Tokachi09 Tokachi09 NNP cord-287647-0nyquokt 58 15 ( ( -LRB- cord-287647-0nyquokt 58 16 LC061272 LC061272 NNP cord-287647-0nyquokt 58 17 ) ) -RRB- cord-287647-0nyquokt 58 18 , , , cord-287647-0nyquokt 58 19 Obihiro12 Obihiro12 NNP cord-287647-0nyquokt 58 20 - - HYPH cord-287647-0nyquokt 58 21 1 1 CD cord-287647-0nyquokt 58 22 ( ( -LRB- cord-287647-0nyquokt 58 23 LC061273 LC061273 NNP cord-287647-0nyquokt 58 24 ) ) -RRB- cord-287647-0nyquokt 58 25 and and CC cord-287647-0nyquokt 58 26 Obihiro12 Obihiro12 NNP cord-287647-0nyquokt 58 27 - - HYPH cord-287647-0nyquokt 58 28 2 2 CD cord-287647-0nyquokt 58 29 ( ( -LRB- cord-287647-0nyquokt 58 30 LC061274 lc061274 NN cord-287647-0nyquokt 58 31 ) ) -RRB- cord-287647-0nyquokt 58 32 [ [ -LRB- cord-287647-0nyquokt 58 33 1 1 CD cord-287647-0nyquokt 58 34 ] ] -RRB- cord-287647-0nyquokt 58 35 , , , cord-287647-0nyquokt 58 36 the the DT cord-287647-0nyquokt 58 37 N N NNP cord-287647-0nyquokt 58 38 ( ( -LRB- cord-287647-0nyquokt 58 39 AB671298 AB671298 NNP cord-287647-0nyquokt 58 40 ) ) -RRB- cord-287647-0nyquokt 58 41 and and CC cord-287647-0nyquokt 58 42 S S NNP cord-287647-0nyquokt 58 43 ( ( -LRB- cord-287647-0nyquokt 58 44 AB671299 ab671299 NN cord-287647-0nyquokt 58 45 ) ) -RRB- cord-287647-0nyquokt 58 46 genes gene NNS cord-287647-0nyquokt 58 47 of of IN cord-287647-0nyquokt 58 48 Obihiro2004 Obihiro2004 NNP cord-287647-0nyquokt 58 49 , , , cord-287647-0nyquokt 58 50 the the DT cord-287647-0nyquokt 58 51 N n CD cord-287647-0nyquokt 58 52 gene gene NN cord-287647-0nyquokt 58 53 of of IN cord-287647-0nyquokt 58 54 Hidaka Hidaka NNP cord-287647-0nyquokt 58 55 - - HYPH cord-287647-0nyquokt 58 56 No.61/2012 No.61/2012 NNP cord-287647-0nyquokt 58 57 ( ( -LRB- cord-287647-0nyquokt 58 58 LC054263 LC054263 NNP cord-287647-0nyquokt 58 59 ) ) -RRB- cord-287647-0nyquokt 58 60 and and CC cord-287647-0nyquokt 58 61 Hidaka Hidaka NNP cord-287647-0nyquokt 58 62 - - HYPH cord-287647-0nyquokt 58 63 No.119/2012 No.119/2012 NNP cord-287647-0nyquokt 58 64 ( ( -LRB- cord-287647-0nyquokt 58 65 LC054264 LC054264 NNP cord-287647-0nyquokt 58 66 ) ) -RRB- cord-287647-0nyquokt 58 67 [ [ -LRB- cord-287647-0nyquokt 58 68 13 13 CD cord-287647-0nyquokt 58 69 ] ] -RRB- cord-287647-0nyquokt 58 70 , , , cord-287647-0nyquokt 58 71 the the DT cord-287647-0nyquokt 58 72 S S NNP cord-287647-0nyquokt 58 73 gene gene NN cord-287647-0nyquokt 58 74 of of IN cord-287647-0nyquokt 58 75 ECoV_FRA_2011/1 ecov_fra_2011/1 FW cord-287647-0nyquokt 58 76 ( ( -LRB- cord-287647-0nyquokt 58 77 KC178705 KC178705 NNP cord-287647-0nyquokt 58 78 ) ) -RRB- cord-287647-0nyquokt 58 79 , , . cord-287647-0nyquokt 59 1 ECoV_FRA_2011/2 ECoV_FRA_2011/2 : cord-287647-0nyquokt 59 2 ( ( -LRB- cord-287647-0nyquokt 59 3 KC178704 KC178704 NNP cord-287647-0nyquokt 59 4 ) ) -RRB- cord-287647-0nyquokt 59 5 , , , cord-287647-0nyquokt 59 6 ECoV_FRA_2012/1 ECoV_FRA_2012/1 NNS cord-287647-0nyquokt 59 7 ( ( -LRB- cord-287647-0nyquokt 59 8 KC178703 KC178703 NNP cord-287647-0nyquokt 59 9 ) ) -RRB- cord-287647-0nyquokt 59 10 , , , cord-287647-0nyquokt 59 11 ECoV_FRA_2012/2 ECoV_FRA_2012/2 '' cord-287647-0nyquokt 59 12 ( ( -LRB- cord-287647-0nyquokt 59 13 KC178702 kc178702 NN cord-287647-0nyquokt 59 14 ) ) -RRB- cord-287647-0nyquokt 59 15 and and CC cord-287647-0nyquokt 59 16 ECoV_FRA_2012/3 ecov_fra_2012/3 FW cord-287647-0nyquokt 59 17 ( ( -LRB- cord-287647-0nyquokt 59 18 KC178701 kc178701 NN cord-287647-0nyquokt 59 19 ) ) -RRB- cord-287647-0nyquokt 60 1 [ [ -LRB- cord-287647-0nyquokt 60 2 9 9 CD cord-287647-0nyquokt 60 3 ] ] -RRB- cord-287647-0nyquokt 60 4 were be VBD cord-287647-0nyquokt 60 5 used use VBN cord-287647-0nyquokt 60 6 in in IN cord-287647-0nyquokt 60 7 sequence sequence NN cord-287647-0nyquokt 60 8 and/or and/or CC cord-287647-0nyquokt 60 9 phylogenetic phylogenetic JJ cord-287647-0nyquokt 60 10 analysis analysis NN cord-287647-0nyquokt 60 11 . . . cord-287647-0nyquokt 61 1 The the DT cord-287647-0nyquokt 61 2 accession accession NN cord-287647-0nyquokt 61 3 numbers number NNS cord-287647-0nyquokt 61 4 registered register VBN cord-287647-0nyquokt 61 5 in in IN cord-287647-0nyquokt 61 6 GenBank GenBank NNP cord-287647-0nyquokt 61 7 / / SYM cord-287647-0nyquokt 61 8 EMBL EMBL NNP cord-287647-0nyquokt 61 9 / / SYM cord-287647-0nyquokt 61 10 DDBJ DDBJ NNP cord-287647-0nyquokt 61 11 are be VBP cord-287647-0nyquokt 61 12 as as IN cord-287647-0nyquokt 61 13 follows follow VBZ cord-287647-0nyquokt 61 14 : : : cord-287647-0nyquokt 61 15 the the DT cord-287647-0nyquokt 61 16 complete complete JJ cord-287647-0nyquokt 61 17 sequences sequence NNS cord-287647-0nyquokt 61 18 of of IN cord-287647-0nyquokt 61 19 the the DT cord-287647-0nyquokt 61 20 N n CD cord-287647-0nyquokt 61 21 gene gene NN cord-287647-0nyquokt 61 22 ; ; : cord-287647-0nyquokt 61 23 11V11708 11v11708 CD cord-287647-0nyquokt 61 24 / / SYM cord-287647-0nyquokt 61 25 IRL IRL NNP cord-287647-0nyquokt 61 26 ( ( -LRB- cord-287647-0nyquokt 61 27 LC149485 lc149485 NN cord-287647-0nyquokt 61 28 ) ) -RRB- cord-287647-0nyquokt 61 29 and and CC cord-287647-0nyquokt 61 30 13V08313 13v08313 CD cord-287647-0nyquokt 61 31 / / SYM cord-287647-0nyquokt 61 32 IRL IRL NNP cord-287647-0nyquokt 61 33 ( ( -LRB- cord-287647-0nyquokt 61 34 LC149486 LC149486 NNP cord-287647-0nyquokt 61 35 ) ) -RRB- cord-287647-0nyquokt 61 36 , , , cord-287647-0nyquokt 61 37 the the DT cord-287647-0nyquokt 61 38 partial partial JJ cord-287647-0nyquokt 61 39 sequences sequence NNS cord-287647-0nyquokt 61 40 of of IN cord-287647-0nyquokt 61 41 the the DT cord-287647-0nyquokt 61 42 S S NNP cord-287647-0nyquokt 61 43 gene gene NN cord-287647-0nyquokt 61 44 ; ; : cord-287647-0nyquokt 61 45 11V11708 11v11708 CD cord-287647-0nyquokt 61 46 / / SYM cord-287647-0nyquokt 61 47 IRL IRL NNP cord-287647-0nyquokt 61 48 ( ( -LRB- cord-287647-0nyquokt 61 49 LC149487 lc149487 NN cord-287647-0nyquokt 61 50 ) ) -RRB- cord-287647-0nyquokt 62 1 and13V08313 and13v08313 JJ cord-287647-0nyquokt 63 1 /IRL /IRL NNP cord-287647-0nyquokt 63 2 ( ( -LRB- cord-287647-0nyquokt 63 3 LC149488 LC149488 NNP cord-287647-0nyquokt 63 4 ) ) -RRB- cord-287647-0nyquokt 63 5 and and CC cord-287647-0nyquokt 63 6 the the DT cord-287647-0nyquokt 63 7 complete complete JJ cord-287647-0nyquokt 63 8 sequences sequence NNS cord-287647-0nyquokt 63 9 from from IN cord-287647-0nyquokt 63 10 the the DT cord-287647-0nyquokt 63 11 p4.7 p4.7 NN cord-287647-0nyquokt 63 12 to to IN cord-287647-0nyquokt 63 13 p12.7 p12.7 JJ cord-287647-0nyquokt 63 14 genes gene NNS cord-287647-0nyquokt 63 15 ; ; : cord-287647-0nyquokt 63 16 11V11708 11v11708 CD cord-287647-0nyquokt 63 17 / / SYM cord-287647-0nyquokt 63 18 IRL IRL NNP cord-287647-0nyquokt 63 19 ( ( -LRB- cord-287647-0nyquokt 63 20 LC149489 lc149489 NN cord-287647-0nyquokt 63 21 ) ) -RRB- cord-287647-0nyquokt 63 22 and13V08313 and13v08313 CD cord-287647-0nyquokt 63 23 / / SYM cord-287647-0nyquokt 63 24 IRL IRL NNP cord-287647-0nyquokt 63 25 ( ( -LRB- cord-287647-0nyquokt 63 26 LC149490 lc149490 NN cord-287647-0nyquokt 63 27 ) ) -RRB- cord-287647-0nyquokt 63 28 . . . cord-287647-0nyquokt 64 1 One one CD cord-287647-0nyquokt 64 2 six six CD cord-287647-0nyquokt 64 3 - - HYPH cord-287647-0nyquokt 64 4 week week NN cord-287647-0nyquokt 64 5 - - HYPH cord-287647-0nyquokt 64 6 old old JJ cord-287647-0nyquokt 64 7 foal foal NN cord-287647-0nyquokt 64 8 was be VBD cord-287647-0nyquokt 64 9 the the DT cord-287647-0nyquokt 64 10 only only JJ cord-287647-0nyquokt 64 11 clinical clinical JJ cord-287647-0nyquokt 64 12 case case NN cord-287647-0nyquokt 64 13 on on IN cord-287647-0nyquokt 64 14 a a DT cord-287647-0nyquokt 64 15 public public JJ cord-287647-0nyquokt 64 16 Thoroughbred thoroughbred JJ cord-287647-0nyquokt 64 17 stud stud NN cord-287647-0nyquokt 64 18 farm farm NN cord-287647-0nyquokt 64 19 with with IN cord-287647-0nyquokt 64 20 approximately approximately RB cord-287647-0nyquokt 64 21 30 30 CD cord-287647-0nyquokt 64 22 mares mare NNS cord-287647-0nyquokt 64 23 when when WRB cord-287647-0nyquokt 64 24 it -PRON- PRP cord-287647-0nyquokt 64 25 presented present VBD cord-287647-0nyquokt 64 26 with with IN cord-287647-0nyquokt 64 27 diarrhoea diarrhoea NN cord-287647-0nyquokt 64 28 . . . cord-287647-0nyquokt 65 1 Recovery recovery NN cord-287647-0nyquokt 65 2 took take VBD cord-287647-0nyquokt 65 3 over over RP cord-287647-0nyquokt 65 4 three three CD cord-287647-0nyquokt 65 5 weeks week NNS cord-287647-0nyquokt 65 6 during during IN cord-287647-0nyquokt 65 7 which which WDT cord-287647-0nyquokt 65 8 it -PRON- PRP cord-287647-0nyquokt 65 9 received receive VBD cord-287647-0nyquokt 65 10 fluid fluid JJ cord-287647-0nyquokt 65 11 therapy therapy NN cord-287647-0nyquokt 65 12 , , , cord-287647-0nyquokt 65 13 probiotics probiotic NNS cord-287647-0nyquokt 65 14 , , , cord-287647-0nyquokt 65 15 antiulcer antiulcer NNP cord-287647-0nyquokt 65 16 medication medication NN cord-287647-0nyquokt 65 17 and and CC cord-287647-0nyquokt 65 18 antibiotics antibiotic NNS cord-287647-0nyquokt 65 19 . . . cord-287647-0nyquokt 66 1 The the DT cord-287647-0nyquokt 66 2 second second JJ cord-287647-0nyquokt 66 3 foal foal NN cord-287647-0nyquokt 66 4 was be VBD cord-287647-0nyquokt 66 5 a a DT cord-287647-0nyquokt 66 6 14-day 14-day CD cord-287647-0nyquokt 66 7 - - HYPH cord-287647-0nyquokt 66 8 old old JJ cord-287647-0nyquokt 66 9 filly filly NN cord-287647-0nyquokt 66 10 , , , cord-287647-0nyquokt 66 11 which which WDT cord-287647-0nyquokt 66 12 had have VBD cord-287647-0nyquokt 66 13 been be VBN cord-287647-0nyquokt 66 14 hospitalised hospitalise VBN cord-287647-0nyquokt 66 15 with with IN cord-287647-0nyquokt 66 16 diarrhoea diarrhoea NN cord-287647-0nyquokt 66 17 two two CD cord-287647-0nyquokt 66 18 days day NNS cord-287647-0nyquokt 66 19 prior prior RB cord-287647-0nyquokt 66 20 to to IN cord-287647-0nyquokt 66 21 sample sample NN cord-287647-0nyquokt 66 22 collection collection NN cord-287647-0nyquokt 66 23 . . . cord-287647-0nyquokt 67 1 The the DT cord-287647-0nyquokt 67 2 foal foal NN cord-287647-0nyquokt 67 3 responded respond VBD cord-287647-0nyquokt 67 4 well well RB cord-287647-0nyquokt 67 5 to to IN cord-287647-0nyquokt 67 6 supportive supportive JJ cord-287647-0nyquokt 67 7 treatment treatment NN cord-287647-0nyquokt 67 8 and and CC cord-287647-0nyquokt 67 9 at at IN cord-287647-0nyquokt 67 10 the the DT cord-287647-0nyquokt 67 11 time time NN cord-287647-0nyquokt 67 12 of of IN cord-287647-0nyquokt 67 13 sample sample NN cord-287647-0nyquokt 67 14 collection collection NN cord-287647-0nyquokt 67 15 , , , cord-287647-0nyquokt 67 16 the the DT cord-287647-0nyquokt 67 17 diarrhoea diarrhoea NN cord-287647-0nyquokt 67 18 had have VBD cord-287647-0nyquokt 67 19 resolved resolve VBN cord-287647-0nyquokt 67 20 . . . cord-287647-0nyquokt 68 1 The the DT cord-287647-0nyquokt 68 2 five five CD cord-287647-0nyquokt 68 3 ECoV ecov JJ cord-287647-0nyquokt 68 4 positive positive JJ cord-287647-0nyquokt 68 5 samples sample NNS cord-287647-0nyquokt 68 6 tested test VBN cord-287647-0nyquokt 68 7 negative negative JJ cord-287647-0nyquokt 68 8 for for IN cord-287647-0nyquokt 68 9 equine equine JJ cord-287647-0nyquokt 68 10 rotavirus rotavirus NN cord-287647-0nyquokt 68 11 . . . cord-287647-0nyquokt 69 1 The the DT cord-287647-0nyquokt 69 2 nucleotide nucleotide JJ cord-287647-0nyquokt 69 3 sequences sequence NNS cord-287647-0nyquokt 69 4 of of IN cord-287647-0nyquokt 69 5 the the DT cord-287647-0nyquokt 69 6 complete complete JJ cord-287647-0nyquokt 69 7 N n CD cord-287647-0nyquokt 69 8 gene gene NN cord-287647-0nyquokt 69 9 , , , cord-287647-0nyquokt 69 10 the the DT cord-287647-0nyquokt 69 11 partial partial JJ cord-287647-0nyquokt 69 12 S S NNP cord-287647-0nyquokt 69 13 gene gene NN cord-287647-0nyquokt 69 14 and and CC cord-287647-0nyquokt 69 15 the the DT cord-287647-0nyquokt 69 16 region region NN cord-287647-0nyquokt 69 17 from from IN cord-287647-0nyquokt 69 18 the the DT cord-287647-0nyquokt 69 19 p4.7 p4.7 NN cord-287647-0nyquokt 69 20 to to IN cord-287647-0nyquokt 69 21 p12.7 p12.7 JJ cord-287647-0nyquokt 69 22 genes gene NNS cord-287647-0nyquokt 69 23 of of IN cord-287647-0nyquokt 69 24 two two CD cord-287647-0nyquokt 69 25 positive positive JJ cord-287647-0nyquokt 69 26 samples sample NNS cord-287647-0nyquokt 69 27 ( ( -LRB- cord-287647-0nyquokt 69 28 11V11708 11V11708 NNP cord-287647-0nyquokt 69 29 / / SYM cord-287647-0nyquokt 69 30 IRL/2011 IRL/2011 NNP cord-287647-0nyquokt 69 31 and and CC cord-287647-0nyquokt 69 32 13V08313 13V08313 NNP cord-287647-0nyquokt 69 33 / / SYM cord-287647-0nyquokt 69 34 IRL/2013 IRL/2013 NNP cord-287647-0nyquokt 69 35 ) ) -RRB- cord-287647-0nyquokt 69 36 were be VBD cord-287647-0nyquokt 69 37 determined determine VBN cord-287647-0nyquokt 69 38 . . . cord-287647-0nyquokt 70 1 The the DT cord-287647-0nyquokt 70 2 nucleotide nucleotide JJ cord-287647-0nyquokt 70 3 identities identity NNS cord-287647-0nyquokt 70 4 of of IN cord-287647-0nyquokt 70 5 the the DT cord-287647-0nyquokt 70 6 N N NNP cord-287647-0nyquokt 70 7 and and CC cord-287647-0nyquokt 70 8 S S NNP cord-287647-0nyquokt 70 9 genes gene NNS cord-287647-0nyquokt 70 10 of of IN cord-287647-0nyquokt 70 11 the the DT cord-287647-0nyquokt 70 12 two two CD cord-287647-0nyquokt 70 13 Irish irish JJ cord-287647-0nyquokt 70 14 ECoVs ecov NNS cord-287647-0nyquokt 70 15 were be VBD cord-287647-0nyquokt 70 16 99.8 99.8 CD cord-287647-0nyquokt 70 17 % % NN cord-287647-0nyquokt 70 18 ( ( -LRB- cord-287647-0nyquokt 70 19 1338/1341 1338/1341 CD cord-287647-0nyquokt 70 20 nucleotides nucleotide NNS cord-287647-0nyquokt 70 21 ) ) -RRB- cord-287647-0nyquokt 70 22 and and CC cord-287647-0nyquokt 70 23 99.5 99.5 CD cord-287647-0nyquokt 70 24 % % NN cord-287647-0nyquokt 70 25 ( ( -LRB- cord-287647-0nyquokt 70 26 650/653 650/653 CD cord-287647-0nyquokt 70 27 nucleotides nucleotide NNS cord-287647-0nyquokt 70 28 ) ) -RRB- cord-287647-0nyquokt 70 29 , , , cord-287647-0nyquokt 70 30 respectively respectively RB cord-287647-0nyquokt 70 31 . . . cord-287647-0nyquokt 71 1 The the DT cord-287647-0nyquokt 71 2 nucleotide nucleotide JJ cord-287647-0nyquokt 71 3 identities identity NNS cord-287647-0nyquokt 71 4 of of IN cord-287647-0nyquokt 71 5 the the DT cord-287647-0nyquokt 71 6 N n CD cord-287647-0nyquokt 71 7 gene gene NN cord-287647-0nyquokt 71 8 of of IN cord-287647-0nyquokt 71 9 the the DT cord-287647-0nyquokt 71 10 two two CD cord-287647-0nyquokt 71 11 Irish irish JJ cord-287647-0nyquokt 71 12 ECoVs ecovs NN cord-287647-0nyquokt 71 13 and and CC cord-287647-0nyquokt 71 14 the the DT cord-287647-0nyquokt 71 15 ECoVs ecovs NN cord-287647-0nyquokt 71 16 from from IN cord-287647-0nyquokt 71 17 other other JJ cord-287647-0nyquokt 71 18 continents continent NNS cord-287647-0nyquokt 71 19 are be VBP cord-287647-0nyquokt 71 20 summarised summarise VBN cord-287647-0nyquokt 71 21 in in IN cord-287647-0nyquokt 71 22 Table Table NNP cord-287647-0nyquokt 71 23 2 2 CD cord-287647-0nyquokt 71 24 . . . cord-287647-0nyquokt 72 1 Phylogenetic phylogenetic JJ cord-287647-0nyquokt 72 2 analysis analysis NN cord-287647-0nyquokt 72 3 was be VBD cord-287647-0nyquokt 72 4 performed perform VBN cord-287647-0nyquokt 72 5 for for IN cord-287647-0nyquokt 72 6 the the DT cord-287647-0nyquokt 72 7 nucleotide nucleotide JJ cord-287647-0nyquokt 72 8 sequences sequence NNS cord-287647-0nyquokt 72 9 of of IN cord-287647-0nyquokt 72 10 the the DT cord-287647-0nyquokt 72 11 complete complete JJ cord-287647-0nyquokt 72 12 N n NN cord-287647-0nyquokt 72 13 and and CC cord-287647-0nyquokt 72 14 partial partial JJ cord-287647-0nyquokt 72 15 S s NN cord-287647-0nyquokt 72 16 genes gene NNS cord-287647-0nyquokt 72 17 ( ( -LRB- cord-287647-0nyquokt 72 18 Figure figure NN cord-287647-0nyquokt 72 19 1 1 CD cord-287647-0nyquokt 72 20 ) ) -RRB- cord-287647-0nyquokt 72 21 . . . cord-287647-0nyquokt 73 1 The the DT cord-287647-0nyquokt 73 2 analysis analysis NN cord-287647-0nyquokt 73 3 for for IN cord-287647-0nyquokt 73 4 the the DT cord-287647-0nyquokt 73 5 N N NNP cord-287647-0nyquokt 73 6 gene gene NN cord-287647-0nyquokt 73 7 showed show VBD cord-287647-0nyquokt 73 8 that that IN cord-287647-0nyquokt 73 9 Irish irish JJ cord-287647-0nyquokt 73 10 ECoVs ECoVs '' cord-287647-0nyquokt 73 11 were be VBD cord-287647-0nyquokt 73 12 independently independently RB cord-287647-0nyquokt 73 13 clustered cluster VBN cord-287647-0nyquokt 73 14 although although IN cord-287647-0nyquokt 73 15 they -PRON- PRP cord-287647-0nyquokt 73 16 were be VBD cord-287647-0nyquokt 73 17 closely closely RB cord-287647-0nyquokt 73 18 related relate VBN cord-287647-0nyquokt 73 19 to to IN cord-287647-0nyquokt 73 20 Japanese japanese JJ cord-287647-0nyquokt 73 21 viruses virus NNS cord-287647-0nyquokt 73 22 identified identify VBN cord-287647-0nyquokt 73 23 after after IN cord-287647-0nyquokt 73 24 2009 2009 CD cord-287647-0nyquokt 73 25 . . . cord-287647-0nyquokt 74 1 In in IN cord-287647-0nyquokt 74 2 the the DT cord-287647-0nyquokt 74 3 phylogenetic phylogenetic JJ cord-287647-0nyquokt 74 4 tree tree NN cord-287647-0nyquokt 74 5 of of IN cord-287647-0nyquokt 74 6 the the DT cord-287647-0nyquokt 74 7 S S NNP cord-287647-0nyquokt 74 8 gene gene NN cord-287647-0nyquokt 74 9 , , , cord-287647-0nyquokt 74 10 Irish Irish NNP cord-287647-0nyquokt 74 11 ECoVs ecovs PRP cord-287647-0nyquokt 74 12 were be VBD cord-287647-0nyquokt 74 13 closely closely RB cord-287647-0nyquokt 74 14 related related JJ cord-287647-0nyquokt 74 15 to to IN cord-287647-0nyquokt 74 16 all all DT cord-287647-0nyquokt 74 17 other other JJ cord-287647-0nyquokt 74 18 ECoVs ecovs NN cord-287647-0nyquokt 74 19 analysed analyse VBN cord-287647-0nyquokt 74 20 . . . cord-287647-0nyquokt 75 1 The the DT cord-287647-0nyquokt 75 2 length length NN cord-287647-0nyquokt 75 3 of of IN cord-287647-0nyquokt 75 4 the the DT cord-287647-0nyquokt 75 5 region region NN cord-287647-0nyquokt 75 6 from from IN cord-287647-0nyquokt 75 7 the the DT cord-287647-0nyquokt 75 8 p4.7 p4.7 NN cord-287647-0nyquokt 75 9 to to IN cord-287647-0nyquokt 75 10 p12.7 p12.7 JJ cord-287647-0nyquokt 75 11 genes gene NNS cord-287647-0nyquokt 75 12 in in IN cord-287647-0nyquokt 75 13 the the DT cord-287647-0nyquokt 75 14 two two CD cord-287647-0nyquokt 75 15 viruses virus NNS cord-287647-0nyquokt 75 16 was be VBD cord-287647-0nyquokt 75 17 544 544 CD cord-287647-0nyquokt 75 18 base base NN cord-287647-0nyquokt 75 19 pairs pair NNS cord-287647-0nyquokt 75 20 . . . cord-287647-0nyquokt 76 1 Compared compare VBN cord-287647-0nyquokt 76 2 with with IN cord-287647-0nyquokt 76 3 NC99 NC99 NNP cord-287647-0nyquokt 76 4 , , , cord-287647-0nyquokt 76 5 Irish irish JJ cord-287647-0nyquokt 76 6 ECoVs ecovs NN cord-287647-0nyquokt 76 7 , , , cord-287647-0nyquokt 76 8 had have VBD cord-287647-0nyquokt 76 9 a a DT cord-287647-0nyquokt 76 10 total total NN cord-287647-0nyquokt 76 11 of of IN cord-287647-0nyquokt 76 12 37 37 CD cord-287647-0nyquokt 76 13 nucleotide nucleotide JJ cord-287647-0nyquokt 76 14 deletions deletion NNS cord-287647-0nyquokt 76 15 within within IN cord-287647-0nyquokt 76 16 p4.7 p4.7 NN cord-287647-0nyquokt 76 17 and and CC cord-287647-0nyquokt 76 18 the the DT cord-287647-0nyquokt 76 19 non non JJ cord-287647-0nyquokt 76 20 - - JJ cord-287647-0nyquokt 76 21 coding code VBG cord-287647-0nyquokt 76 22 region region NN cord-287647-0nyquokt 76 23 following follow VBG cord-287647-0nyquokt 76 24 the the DT cord-287647-0nyquokt 76 25 p4.7 p4.7 JJ cord-287647-0nyquokt 76 26 gene gene NN cord-287647-0nyquokt 76 27 . . . cord-287647-0nyquokt 77 1 Compared compare VBN cord-287647-0nyquokt 77 2 with with IN cord-287647-0nyquokt 77 3 Obihiro Obihiro NNP cord-287647-0nyquokt 77 4 12 12 CD cord-287647-0nyquokt 77 5 - - SYM cord-287647-0nyquokt 77 6 1 1 CD cord-287647-0nyquokt 77 7 and and CC cord-287647-0nyquokt 77 8 12 12 CD cord-287647-0nyquokt 77 9 - - SYM cord-287647-0nyquokt 77 10 2 2 CD cord-287647-0nyquokt 77 11 , , , cord-287647-0nyquokt 77 12 Irish Irish NNP cord-287647-0nyquokt 77 13 ECoVs ecovs PRP cord-287647-0nyquokt 77 14 had have VBD cord-287647-0nyquokt 77 15 a a DT cord-287647-0nyquokt 77 16 three three CD cord-287647-0nyquokt 77 17 - - HYPH cord-287647-0nyquokt 77 18 nucleotide nucleotide JJ cord-287647-0nyquokt 77 19 insertion insertion NN cord-287647-0nyquokt 77 20 . . . cord-287647-0nyquokt 78 1 When when WRB cord-287647-0nyquokt 78 2 compared compare VBN cord-287647-0nyquokt 78 3 with with IN cord-287647-0nyquokt 78 4 Tokachi09 Tokachi09 NNP cord-287647-0nyquokt 78 5 , , , cord-287647-0nyquokt 78 6 the the DT cord-287647-0nyquokt 78 7 Irish irish JJ cord-287647-0nyquokt 78 8 ECoVs ecovs NN cord-287647-0nyquokt 78 9 had have VBD cord-287647-0nyquokt 78 10 a a DT cord-287647-0nyquokt 78 11 148-nucleotide 148-nucleotide CD cord-287647-0nyquokt 78 12 insertion insertion NN cord-287647-0nyquokt 78 13 ( ( -LRB- cord-287647-0nyquokt 78 14 see see VB cord-287647-0nyquokt 78 15 Figure Figure NNP cord-287647-0nyquokt 78 16 S1 S1 NNP cord-287647-0nyquokt 78 17 ) ) -RRB- cord-287647-0nyquokt 78 18 . . . cord-287647-0nyquokt 79 1 The the DT cord-287647-0nyquokt 79 2 p12.7 p12.7 NN cord-287647-0nyquokt 79 3 gene gene NN cord-287647-0nyquokt 79 4 of of IN cord-287647-0nyquokt 79 5 the the DT cord-287647-0nyquokt 79 6 two two CD cord-287647-0nyquokt 79 7 Irish irish JJ cord-287647-0nyquokt 79 8 ECoVs ecovs NN cord-287647-0nyquokt 79 9 did do VBD cord-287647-0nyquokt 79 10 not not RB cord-287647-0nyquokt 79 11 have have VB cord-287647-0nyquokt 79 12 deletions deletion NNS cord-287647-0nyquokt 79 13 or or CC cord-287647-0nyquokt 79 14 insertions insertion NNS cord-287647-0nyquokt 79 15 , , , cord-287647-0nyquokt 79 16 and and CC cord-287647-0nyquokt 79 17 the the DT cord-287647-0nyquokt 79 18 nucleotide nucleotide JJ cord-287647-0nyquokt 79 19 identities identity NNS cord-287647-0nyquokt 79 20 were be VBD cord-287647-0nyquokt 79 21 98.8 98.8 CD cord-287647-0nyquokt 79 22 - - HYPH cord-287647-0nyquokt 79 23 99.7 99.7 CD cord-287647-0nyquokt 79 24 % % NN cord-287647-0nyquokt 79 25 between between IN cord-287647-0nyquokt 79 26 these these DT cord-287647-0nyquokt 79 27 viruses virus NNS cord-287647-0nyquokt 79 28 and and CC cord-287647-0nyquokt 80 1 the the DT cord-287647-0nyquokt 80 2 other other JJ cord-287647-0nyquokt 80 3 ECoVs ecovs NN cord-287647-0nyquokt 80 4 ( ( -LRB- cord-287647-0nyquokt 80 5 NC99 NC99 NNP cord-287647-0nyquokt 80 6 , , , cord-287647-0nyquokt 80 7 Tokachi09 Tokachi09 NNP cord-287647-0nyquokt 80 8 , , , cord-287647-0nyquokt 80 9 Obihiro12 Obihiro12 NNP cord-287647-0nyquokt 80 10 - - HYPH cord-287647-0nyquokt 80 11 1 1 CD cord-287647-0nyquokt 80 12 and and CC cord-287647-0nyquokt 80 13 Obihiro12 Obihiro12 NNP cord-287647-0nyquokt 80 14 - - HYPH cord-287647-0nyquokt 80 15 2 2 CD cord-287647-0nyquokt 80 16 ) ) -RRB- cord-287647-0nyquokt 80 17 . . . cord-287647-0nyquokt 80 18 _SP cord-287647-0nyquokt 81 1 This this DT cord-287647-0nyquokt 81 2 study study NN cord-287647-0nyquokt 81 3 provides provide VBZ cord-287647-0nyquokt 81 4 the the DT cord-287647-0nyquokt 81 5 first first JJ cord-287647-0nyquokt 81 6 report report NN cord-287647-0nyquokt 81 7 of of IN cord-287647-0nyquokt 81 8 ECoV ECoV NNP cord-287647-0nyquokt 81 9 circulating circulating NN cord-287647-0nyquokt 81 10 in in IN cord-287647-0nyquokt 81 11 Ireland Ireland NNP cord-287647-0nyquokt 81 12 , , , cord-287647-0nyquokt 81 13 the the DT cord-287647-0nyquokt 81 14 third third JJ cord-287647-0nyquokt 81 15 European european JJ cord-287647-0nyquokt 81 16 country country NN cord-287647-0nyquokt 81 17 with with IN cord-287647-0nyquokt 81 18 a a DT cord-287647-0nyquokt 81 19 significant significant JJ cord-287647-0nyquokt 81 20 horse horse NN cord-287647-0nyquokt 81 21 industry industry NN cord-287647-0nyquokt 81 22 where where WRB cord-287647-0nyquokt 81 23 the the DT cord-287647-0nyquokt 81 24 virus virus NN cord-287647-0nyquokt 81 25 has have VBZ cord-287647-0nyquokt 81 26 been be VBN cord-287647-0nyquokt 81 27 detected detect VBN cord-287647-0nyquokt 81 28 in in IN cord-287647-0nyquokt 81 29 horses horse NNS cord-287647-0nyquokt 81 30 with with IN cord-287647-0nyquokt 81 31 enteric enteric JJ cord-287647-0nyquokt 81 32 disease disease NN cord-287647-0nyquokt 81 33 . . . cord-287647-0nyquokt 82 1 However however RB cord-287647-0nyquokt 82 2 , , , cord-287647-0nyquokt 82 3 detection detection NN cord-287647-0nyquokt 82 4 of of IN cord-287647-0nyquokt 82 5 ECoV ecov NN cord-287647-0nyquokt 82 6 in in IN cord-287647-0nyquokt 82 7 faeces faece NNS cord-287647-0nyquokt 82 8 samples sample NNS cord-287647-0nyquokt 82 9 from from IN cord-287647-0nyquokt 82 10 horses horse NNS cord-287647-0nyquokt 82 11 with with IN cord-287647-0nyquokt 82 12 enteric enteric JJ cord-287647-0nyquokt 82 13 disease disease NN cord-287647-0nyquokt 82 14 does do VBZ cord-287647-0nyquokt 82 15 not not RB cord-287647-0nyquokt 82 16 prove prove VB cord-287647-0nyquokt 82 17 _SP cord-287647-0nyquokt 83 1 This this DT cord-287647-0nyquokt 83 2 study study NN cord-287647-0nyquokt 83 3 provides provide VBZ cord-287647-0nyquokt 83 4 the the DT cord-287647-0nyquokt 83 5 first first JJ cord-287647-0nyquokt 83 6 report report NN cord-287647-0nyquokt 83 7 of of IN cord-287647-0nyquokt 83 8 ECoV ECoV NNP cord-287647-0nyquokt 83 9 circulating circulating NN cord-287647-0nyquokt 83 10 in in IN cord-287647-0nyquokt 83 11 Ireland Ireland NNP cord-287647-0nyquokt 83 12 , , , cord-287647-0nyquokt 83 13 the the DT cord-287647-0nyquokt 83 14 third third JJ cord-287647-0nyquokt 83 15 European european JJ cord-287647-0nyquokt 83 16 country country NN cord-287647-0nyquokt 83 17 with with IN cord-287647-0nyquokt 83 18 a a DT cord-287647-0nyquokt 83 19 significant significant JJ cord-287647-0nyquokt 83 20 horse horse NN cord-287647-0nyquokt 83 21 industry industry NN cord-287647-0nyquokt 83 22 where where WRB cord-287647-0nyquokt 83 23 the the DT cord-287647-0nyquokt 83 24 virus virus NN cord-287647-0nyquokt 83 25 has have VBZ cord-287647-0nyquokt 83 26 been be VBN cord-287647-0nyquokt 83 27 detected detect VBN cord-287647-0nyquokt 83 28 in in IN cord-287647-0nyquokt 83 29 horses horse NNS cord-287647-0nyquokt 83 30 with with IN cord-287647-0nyquokt 83 31 enteric enteric JJ cord-287647-0nyquokt 83 32 disease disease NN cord-287647-0nyquokt 83 33 . . . cord-287647-0nyquokt 84 1 However however RB cord-287647-0nyquokt 84 2 , , , cord-287647-0nyquokt 84 3 detection detection NN cord-287647-0nyquokt 84 4 of of IN cord-287647-0nyquokt 84 5 ECoV ecov NN cord-287647-0nyquokt 84 6 in in IN cord-287647-0nyquokt 84 7 faeces faece NNS cord-287647-0nyquokt 84 8 samples sample NNS cord-287647-0nyquokt 84 9 from from IN cord-287647-0nyquokt 84 10 horses horse NNS cord-287647-0nyquokt 84 11 with with IN cord-287647-0nyquokt 84 12 enteric enteric JJ cord-287647-0nyquokt 84 13 disease disease NN cord-287647-0nyquokt 84 14 does do VBZ cord-287647-0nyquokt 84 15 not not RB cord-287647-0nyquokt 84 16 prove prove VB cord-287647-0nyquokt 84 17 causation causation NN cord-287647-0nyquokt 84 18 . . . cord-287647-0nyquokt 85 1 In in IN cord-287647-0nyquokt 85 2 this this DT cord-287647-0nyquokt 85 3 study study NN cord-287647-0nyquokt 85 4 , , , cord-287647-0nyquokt 85 5 424 424 CD cord-287647-0nyquokt 85 6 samples sample NNS cord-287647-0nyquokt 85 7 collected collect VBN cord-287647-0nyquokt 85 8 between between IN cord-287647-0nyquokt 85 9 2011 2011 CD cord-287647-0nyquokt 85 10 and and CC cord-287647-0nyquokt 85 11 2015 2015 CD cord-287647-0nyquokt 85 12 from from IN cord-287647-0nyquokt 85 13 equids equid NNS cord-287647-0nyquokt 85 14 with with IN cord-287647-0nyquokt 85 15 enteric enteric JJ cord-287647-0nyquokt 85 16 disease disease NN cord-287647-0nyquokt 85 17 were be VBD cord-287647-0nyquokt 85 18 tested test VBN cord-287647-0nyquokt 85 19 , , , cord-287647-0nyquokt 85 20 and and CC cord-287647-0nyquokt 85 21 only only RB cord-287647-0nyquokt 85 22 five five CD cord-287647-0nyquokt 85 23 samples sample NNS cord-287647-0nyquokt 85 24 ( ( -LRB- cord-287647-0nyquokt 85 25 1.2 1.2 CD cord-287647-0nyquokt 85 26 % % NN cord-287647-0nyquokt 85 27 ) ) -RRB- cord-287647-0nyquokt 85 28 were be VBD cord-287647-0nyquokt 85 29 positive positive JJ cord-287647-0nyquokt 85 30 for for IN cord-287647-0nyquokt 85 31 ECoV. ECoV. NNS cord-287647-0nyquokt 86 1 The the DT cord-287647-0nyquokt 86 2 inclusion inclusion NN cord-287647-0nyquokt 86 3 of of IN cord-287647-0nyquokt 86 4 an an DT cord-287647-0nyquokt 86 5 internal internal JJ cord-287647-0nyquokt 86 6 positive positive JJ cord-287647-0nyquokt 86 7 control control NN cord-287647-0nyquokt 86 8 in in IN cord-287647-0nyquokt 86 9 the the DT cord-287647-0nyquokt 86 10 rRT rrt JJ cord-287647-0nyquokt 86 11 - - HYPH cord-287647-0nyquokt 86 12 PCR PCR NNP cord-287647-0nyquokt 86 13 eliminated eliminate VBD cord-287647-0nyquokt 86 14 the the DT cord-287647-0nyquokt 86 15 possibility possibility NN cord-287647-0nyquokt 86 16 of of IN cord-287647-0nyquokt 86 17 false false JJ cord-287647-0nyquokt 86 18 negative negative JJ cord-287647-0nyquokt 86 19 results result NNS cord-287647-0nyquokt 86 20 due due JJ cord-287647-0nyquokt 86 21 to to IN cord-287647-0nyquokt 86 22 the the DT cord-287647-0nyquokt 86 23 presence presence NN cord-287647-0nyquokt 86 24 of of IN cord-287647-0nyquokt 86 25 PCR PCR NNP cord-287647-0nyquokt 86 26 inhibitors inhibitor NNS cord-287647-0nyquokt 86 27 but but CC cord-287647-0nyquokt 86 28 the the DT cord-287647-0nyquokt 86 29 high high JJ cord-287647-0nyquokt 86 30 content content NN cord-287647-0nyquokt 86 31 of of IN cord-287647-0nyquokt 86 32 nucleases nuclease NNS cord-287647-0nyquokt 86 33 associated associate VBN cord-287647-0nyquokt 86 34 with with IN cord-287647-0nyquokt 86 35 faeces faece NNS cord-287647-0nyquokt 86 36 samples sample NNS cord-287647-0nyquokt 86 37 may may MD cord-287647-0nyquokt 86 38 have have VB cord-287647-0nyquokt 86 39 caused cause VBN cord-287647-0nyquokt 86 40 some some DT cord-287647-0nyquokt 86 41 RNA RNA NNP cord-287647-0nyquokt 86 42 degradation degradation NN cord-287647-0nyquokt 86 43 . . . cord-287647-0nyquokt 87 1 However however RB cord-287647-0nyquokt 87 2 , , , cord-287647-0nyquokt 87 3 this this DT cord-287647-0nyquokt 87 4 low low JJ cord-287647-0nyquokt 87 5 prevalence prevalence NN cord-287647-0nyquokt 87 6 of of IN cord-287647-0nyquokt 87 7 ECoV ECoV NNP cord-287647-0nyquokt 87 8 is be VBZ cord-287647-0nyquokt 87 9 similar similar JJ cord-287647-0nyquokt 87 10 to to IN cord-287647-0nyquokt 87 11 that that DT cord-287647-0nyquokt 87 12 identified identify VBN cord-287647-0nyquokt 87 13 in in IN cord-287647-0nyquokt 87 14 France France NNP cord-287647-0nyquokt 87 15 [ [ -LRB- cord-287647-0nyquokt 87 16 9 9 CD cord-287647-0nyquokt 87 17 ] ] -RRB- cord-287647-0nyquokt 87 18 and and CC cord-287647-0nyquokt 87 19 among among IN cord-287647-0nyquokt 87 20 Thoroughbred thoroughbred JJ cord-287647-0nyquokt 87 21 foals foal NNS cord-287647-0nyquokt 87 22 in in IN cord-287647-0nyquokt 87 23 Japan Japan NNP cord-287647-0nyquokt 87 24 [ [ -LRB- cord-287647-0nyquokt 87 25 13 13 CD cord-287647-0nyquokt 87 26 ] ] -RRB- cord-287647-0nyquokt 87 27 . . . cord-287647-0nyquokt 88 1 Although although IN cord-287647-0nyquokt 88 2 ECoV ECoV NNP cord-287647-0nyquokt 88 3 has have VBZ cord-287647-0nyquokt 88 4 been be VBN cord-287647-0nyquokt 88 5 identified identify VBN cord-287647-0nyquokt 88 6 on on IN cord-287647-0nyquokt 88 7 three three CD cord-287647-0nyquokt 88 8 continents continent NNS cord-287647-0nyquokt 88 9 , , , cord-287647-0nyquokt 88 10 little little JJ cord-287647-0nyquokt 88 11 is be VBZ cord-287647-0nyquokt 88 12 known know VBN cord-287647-0nyquokt 88 13 about about IN cord-287647-0nyquokt 88 14 the the DT cord-287647-0nyquokt 88 15 genetic genetic JJ cord-287647-0nyquokt 88 16 and and CC cord-287647-0nyquokt 88 17 pathogenic pathogenic JJ cord-287647-0nyquokt 88 18 diversity diversity NN cord-287647-0nyquokt 88 19 in in IN cord-287647-0nyquokt 88 20 field field NN cord-287647-0nyquokt 88 21 viruses virus NNS cord-287647-0nyquokt 88 22 . . . cord-287647-0nyquokt 89 1 In in IN cord-287647-0nyquokt 89 2 this this DT cord-287647-0nyquokt 89 3 study study NN cord-287647-0nyquokt 89 4 , , , cord-287647-0nyquokt 89 5 sequence sequence NN cord-287647-0nyquokt 89 6 and and CC cord-287647-0nyquokt 89 7 phylogenetic phylogenetic NN cord-287647-0nyquokt 89 8 analysis analysis NN cord-287647-0nyquokt 89 9 ( ( -LRB- cord-287647-0nyquokt 89 10 Figure figure NN cord-287647-0nyquokt 89 11 1 1 CD cord-287647-0nyquokt 89 12 ) ) -RRB- cord-287647-0nyquokt 89 13 demonstrated demonstrate VBD cord-287647-0nyquokt 89 14 a a DT cord-287647-0nyquokt 89 15 high high JJ cord-287647-0nyquokt 89 16 level level NN cord-287647-0nyquokt 89 17 of of IN cord-287647-0nyquokt 89 18 homology homology NN cord-287647-0nyquokt 89 19 between between IN cord-287647-0nyquokt 89 20 viruses virus NNS cord-287647-0nyquokt 89 21 detected detect VBN cord-287647-0nyquokt 89 22 in in IN cord-287647-0nyquokt 89 23 a a DT cord-287647-0nyquokt 89 24 donkey donkey NN cord-287647-0nyquokt 89 25 and and CC cord-287647-0nyquokt 89 26 a a DT cord-287647-0nyquokt 89 27 horse horse NN cord-287647-0nyquokt 89 28 in in IN cord-287647-0nyquokt 89 29 two two CD cord-287647-0nyquokt 89 30 provinces province NNS cord-287647-0nyquokt 89 31 in in IN cord-287647-0nyquokt 89 32 Ireland Ireland NNP cord-287647-0nyquokt 89 33 in in IN cord-287647-0nyquokt 89 34 different different JJ cord-287647-0nyquokt 89 35 years year NNS cord-287647-0nyquokt 89 36 . . . cord-287647-0nyquokt 90 1 This this DT cord-287647-0nyquokt 90 2 suggests suggest VBZ cord-287647-0nyquokt 90 3 that that IN cord-287647-0nyquokt 90 4 Irish irish JJ cord-287647-0nyquokt 90 5 ECoVs ecovs NN cord-287647-0nyquokt 90 6 may may MD cord-287647-0nyquokt 90 7 have have VB cord-287647-0nyquokt 90 8 low low JJ cord-287647-0nyquokt 90 9 genetic genetic JJ cord-287647-0nyquokt 90 10 diversity diversity NN cord-287647-0nyquokt 90 11 . . . cord-287647-0nyquokt 91 1 Compared compare VBN cord-287647-0nyquokt 91 2 with with IN cord-287647-0nyquokt 91 3 the the DT cord-287647-0nyquokt 91 4 ECoVs ecovs NN cord-287647-0nyquokt 91 5 of of IN cord-287647-0nyquokt 91 6 other other JJ cord-287647-0nyquokt 91 7 countries country NNS cord-287647-0nyquokt 91 8 , , , cord-287647-0nyquokt 91 9 the the DT cord-287647-0nyquokt 91 10 N N NNP cord-287647-0nyquokt 91 11 , , , cord-287647-0nyquokt 91 12 S S NNP cord-287647-0nyquokt 91 13 and and CC cord-287647-0nyquokt 91 14 p12.7 p12.7 NN cord-287647-0nyquokt 91 15 genes gene NNS cord-287647-0nyquokt 91 16 of of IN cord-287647-0nyquokt 91 17 the the DT cord-287647-0nyquokt 91 18 two two CD cord-287647-0nyquokt 91 19 Irish irish JJ cord-287647-0nyquokt 91 20 viruses virus NNS cord-287647-0nyquokt 91 21 were be VBD cord-287647-0nyquokt 91 22 highly highly RB cord-287647-0nyquokt 91 23 conserved conserve VBN cord-287647-0nyquokt 91 24 . . . cord-287647-0nyquokt 92 1 In in IN cord-287647-0nyquokt 92 2 contrast contrast NN cord-287647-0nyquokt 92 3 , , , cord-287647-0nyquokt 92 4 the the DT cord-287647-0nyquokt 92 5 region region NN cord-287647-0nyquokt 92 6 from from IN cord-287647-0nyquokt 92 7 p4.7 p4.7 NNP cord-287647-0nyquokt 92 8 and and CC cord-287647-0nyquokt 92 9 the the DT cord-287647-0nyquokt 92 10 non non JJ cord-287647-0nyquokt 92 11 - - JJ cord-287647-0nyquokt 92 12 coding code VBG cord-287647-0nyquokt 92 13 region region NN cord-287647-0nyquokt 92 14 following follow VBG cord-287647-0nyquokt 92 15 the the DT cord-287647-0nyquokt 92 16 p4.7 p4.7 JJ cord-287647-0nyquokt 92 17 gene gene NN cord-287647-0nyquokt 92 18 had have VBD cord-287647-0nyquokt 92 19 deletions deletion NNS cord-287647-0nyquokt 92 20 or or CC cord-287647-0nyquokt 92 21 insertions insertion NNS cord-287647-0nyquokt 92 22 ( ( -LRB- cord-287647-0nyquokt 92 23 Figure Figure NNP cord-287647-0nyquokt 92 24 S1 S1 NNP cord-287647-0nyquokt 92 25 ) ) -RRB- cord-287647-0nyquokt 92 26 . . . cord-287647-0nyquokt 93 1 Because because IN cord-287647-0nyquokt 93 2 of of IN cord-287647-0nyquokt 93 3 polymorphism polymorphism NN cord-287647-0nyquokt 93 4 in in IN cord-287647-0nyquokt 93 5 this this DT cord-287647-0nyquokt 93 6 region region NN cord-287647-0nyquokt 93 7 , , , cord-287647-0nyquokt 93 8 this this DT cord-287647-0nyquokt 93 9 region region NN cord-287647-0nyquokt 93 10 could could MD cord-287647-0nyquokt 93 11 be be VB cord-287647-0nyquokt 93 12 useful useful JJ cord-287647-0nyquokt 93 13 for for IN cord-287647-0nyquokt 93 14 epidemiological epidemiological JJ cord-287647-0nyquokt 93 15 investigation investigation NN cord-287647-0nyquokt 93 16 [ [ -LRB- cord-287647-0nyquokt 93 17 5 5 CD cord-287647-0nyquokt 93 18 ] ] -RRB- cord-287647-0nyquokt 93 19 . . . cord-287647-0nyquokt 94 1 The the DT cord-287647-0nyquokt 94 2 differences difference NNS cord-287647-0nyquokt 94 3 in in IN cord-287647-0nyquokt 94 4 the the DT cord-287647-0nyquokt 94 5 p4.7 p4.7 JJ cord-287647-0nyquokt 94 6 region region NN cord-287647-0nyquokt 94 7 between between IN cord-287647-0nyquokt 94 8 the the DT cord-287647-0nyquokt 94 9 Irish irish JJ cord-287647-0nyquokt 94 10 ECoVs ecovs NN cord-287647-0nyquokt 94 11 and and CC cord-287647-0nyquokt 94 12 other other JJ cord-287647-0nyquokt 94 13 ECoVs ecovs NN cord-287647-0nyquokt 94 14 indicated indicate VBD cord-287647-0nyquokt 94 15 that that IN cord-287647-0nyquokt 94 16 the the DT cord-287647-0nyquokt 94 17 viruses virus NNS cord-287647-0nyquokt 94 18 in in IN cord-287647-0nyquokt 94 19 Ireland Ireland NNP cord-287647-0nyquokt 94 20 may may MD cord-287647-0nyquokt 94 21 be be VB cord-287647-0nyquokt 94 22 distinguishable distinguishable JJ cord-287647-0nyquokt 94 23 from from IN cord-287647-0nyquokt 94 24 those those DT cord-287647-0nyquokt 94 25 circulating circulate VBG cord-287647-0nyquokt 94 26 in in IN cord-287647-0nyquokt 94 27 other other JJ cord-287647-0nyquokt 94 28 countries country NNS cord-287647-0nyquokt 94 29 . . . cord-287647-0nyquokt 95 1 The the DT cord-287647-0nyquokt 95 2 positive positive JJ cord-287647-0nyquokt 95 3 samples sample NNS cord-287647-0nyquokt 95 4 were be VBD cord-287647-0nyquokt 95 5 collected collect VBN cord-287647-0nyquokt 95 6 in in IN cord-287647-0nyquokt 95 7 November November NNP cord-287647-0nyquokt 95 8 ( ( -LRB- cord-287647-0nyquokt 95 9 1 1 CD cord-287647-0nyquokt 95 10 ) ) -RRB- cord-287647-0nyquokt 95 11 , , , cord-287647-0nyquokt 95 12 March March NNP cord-287647-0nyquokt 95 13 ( ( -LRB- cord-287647-0nyquokt 95 14 1 1 CD cord-287647-0nyquokt 95 15 ) ) -RRB- cord-287647-0nyquokt 95 16 and and CC cord-287647-0nyquokt 95 17 April April NNP cord-287647-0nyquokt 95 18 ( ( -LRB- cord-287647-0nyquokt 95 19 3 3 CD cord-287647-0nyquokt 95 20 ) ) -RRB- cord-287647-0nyquokt 95 21 in in IN cord-287647-0nyquokt 95 22 this this DT cord-287647-0nyquokt 95 23 study study NN cord-287647-0nyquokt 95 24 . . . cord-287647-0nyquokt 96 1 Higher high JJR cord-287647-0nyquokt 96 2 case case NN cord-287647-0nyquokt 96 3 numbers number NNS cord-287647-0nyquokt 96 4 are be VBP cord-287647-0nyquokt 96 5 identified identify VBN cord-287647-0nyquokt 96 6 in in IN cord-287647-0nyquokt 96 7 the the DT cord-287647-0nyquokt 96 8 USA USA NNP cord-287647-0nyquokt 96 9 during during IN cord-287647-0nyquokt 96 10 the the DT cord-287647-0nyquokt 96 11 colder cold JJR cord-287647-0nyquokt 96 12 months month NNS cord-287647-0nyquokt 96 13 ( ( -LRB- cord-287647-0nyquokt 96 14 October October NNP cord-287647-0nyquokt 96 15 to to IN cord-287647-0nyquokt 96 16 April April NNP cord-287647-0nyquokt 96 17 ) ) -RRB- cord-287647-0nyquokt 96 18 [ [ -LRB- cord-287647-0nyquokt 96 19 11 11 CD cord-287647-0nyquokt 96 20 ] ] -RRB- cord-287647-0nyquokt 96 21 , , , cord-287647-0nyquokt 96 22 and and CC cord-287647-0nyquokt 96 23 our -PRON- PRP$ cord-287647-0nyquokt 96 24 results result NNS cord-287647-0nyquokt 96 25 were be VBD cord-287647-0nyquokt 96 26 consistent consistent JJ cord-287647-0nyquokt 96 27 with with IN cord-287647-0nyquokt 96 28 the the DT cord-287647-0nyquokt 96 29 circulation circulation NN cord-287647-0nyquokt 96 30 period period NN cord-287647-0nyquokt 96 31 in in IN cord-287647-0nyquokt 96 32 USA USA NNP cord-287647-0nyquokt 96 33 . . . cord-287647-0nyquokt 97 1 It -PRON- PRP cord-287647-0nyquokt 97 2 has have VBZ cord-287647-0nyquokt 97 3 been be VBN cord-287647-0nyquokt 97 4 reported report VBN cord-287647-0nyquokt 97 5 that that IN cord-287647-0nyquokt 97 6 outbreaks outbreak NNS cord-287647-0nyquokt 97 7 mainly mainly RB cord-287647-0nyquokt 97 8 occurred occur VBD cord-287647-0nyquokt 97 9 among among IN cord-287647-0nyquokt 97 10 adult adult NN cord-287647-0nyquokt 97 11 riding riding NN cord-287647-0nyquokt 97 12 , , , cord-287647-0nyquokt 97 13 racing racing NN cord-287647-0nyquokt 97 14 and and CC cord-287647-0nyquokt 97 15 show show VB cord-287647-0nyquokt 97 16 horses horse NNS cord-287647-0nyquokt 97 17 in in IN cord-287647-0nyquokt 97 18 USA USA NNP cord-287647-0nyquokt 97 19 [ [ -LRB- cord-287647-0nyquokt 97 20 11 11 CD cord-287647-0nyquokt 97 21 ] ] -RRB- cord-287647-0nyquokt 97 22 . . . cord-287647-0nyquokt 98 1 The the DT cord-287647-0nyquokt 98 2 choice choice NN cord-287647-0nyquokt 98 3 of of IN cord-287647-0nyquokt 98 4 cases case NNS cord-287647-0nyquokt 98 5 to to TO cord-287647-0nyquokt 98 6 include include VB cord-287647-0nyquokt 98 7 in in IN cord-287647-0nyquokt 98 8 the the DT cord-287647-0nyquokt 98 9 current current JJ cord-287647-0nyquokt 98 10 study study NN cord-287647-0nyquokt 98 11 may may MD cord-287647-0nyquokt 98 12 not not RB cord-287647-0nyquokt 98 13 have have VB cord-287647-0nyquokt 98 14 been be VBN cord-287647-0nyquokt 98 15 optimal optimal JJ cord-287647-0nyquokt 98 16 for for IN cord-287647-0nyquokt 98 17 detection detection NN cord-287647-0nyquokt 98 18 of of IN cord-287647-0nyquokt 98 19 ECoV ecov NN cord-287647-0nyquokt 98 20 as as IN cord-287647-0nyquokt 98 21 the the DT cord-287647-0nyquokt 98 22 majority majority NN cord-287647-0nyquokt 98 23 of of IN cord-287647-0nyquokt 98 24 samples sample NNS cord-287647-0nyquokt 98 25 were be VBD cord-287647-0nyquokt 98 26 from from IN cord-287647-0nyquokt 98 27 foals foal NNS cord-287647-0nyquokt 98 28 . . . cord-287647-0nyquokt 99 1 However however RB cord-287647-0nyquokt 99 2 , , , cord-287647-0nyquokt 99 3 two two CD cord-287647-0nyquokt 99 4 positive positive JJ cord-287647-0nyquokt 99 5 samples sample NNS cord-287647-0nyquokt 99 6 were be VBD cord-287647-0nyquokt 99 7 collected collect VBN cord-287647-0nyquokt 99 8 from from IN cord-287647-0nyquokt 99 9 adult adult NN cord-287647-0nyquokt 99 10 horses horse NNS cord-287647-0nyquokt 99 11 in in IN cord-287647-0nyquokt 99 12 a a DT cord-287647-0nyquokt 99 13 combined combined JJ cord-287647-0nyquokt 99 14 riding riding NN cord-287647-0nyquokt 99 15 school school NN cord-287647-0nyquokt 99 16 / / SYM cord-287647-0nyquokt 99 17 show show VBP cord-287647-0nyquokt 99 18 jumping jump VBG cord-287647-0nyquokt 99 19 yard yard NN cord-287647-0nyquokt 99 20 in in IN cord-287647-0nyquokt 99 21 the the DT cord-287647-0nyquokt 99 22 West West NNP cord-287647-0nyquokt 99 23 of of IN cord-287647-0nyquokt 99 24 Ireland Ireland NNP cord-287647-0nyquokt 99 25 . . . cord-287647-0nyquokt 100 1 At at IN cord-287647-0nyquokt 100 2 the the DT cord-287647-0nyquokt 100 3 time time NN cord-287647-0nyquokt 100 4 of of IN cord-287647-0nyquokt 100 5 sample sample NN cord-287647-0nyquokt 100 6 collection collection NN cord-287647-0nyquokt 100 7 in in IN cord-287647-0nyquokt 100 8 April April NNP cord-287647-0nyquokt 100 9 2013 2013 CD cord-287647-0nyquokt 100 10 , , , cord-287647-0nyquokt 100 11 the the DT cord-287647-0nyquokt 100 12 monthly monthly JJ cord-287647-0nyquokt 100 13 mean mean JJ cord-287647-0nyquokt 100 14 temperatures temperature NNS cord-287647-0nyquokt 100 15 were be VBD cord-287647-0nyquokt 100 16 below below IN cord-287647-0nyquokt 100 17 long long JJ cord-287647-0nyquokt 100 18 - - HYPH cord-287647-0nyquokt 100 19 term term NN cord-287647-0nyquokt 100 20 average average JJ cord-287647-0nyquokt 100 21 and and CC cord-287647-0nyquokt 100 22 in in IN cord-287647-0nyquokt 100 23 parts part NNS cord-287647-0nyquokt 100 24 of of IN cord-287647-0nyquokt 100 25 the the DT cord-287647-0nyquokt 100 26 West West NNP cord-287647-0nyquokt 100 27 , , , cord-287647-0nyquokt 100 28 were be VBD cord-287647-0nyquokt 100 29 the the DT cord-287647-0nyquokt 100 30 coldest cold JJS cord-287647-0nyquokt 100 31 in in IN cord-287647-0nyquokt 100 32 24 24 CD cord-287647-0nyquokt 100 33 years year NNS cord-287647-0nyquokt 100 34 [ [ -LRB- cord-287647-0nyquokt 100 35 18 18 CD cord-287647-0nyquokt 100 36 ] ] -RRB- cord-287647-0nyquokt 100 37 . . . cord-287647-0nyquokt 101 1 Cold cold JJ cord-287647-0nyquokt 101 2 weather weather NN cord-287647-0nyquokt 101 3 may may MD cord-287647-0nyquokt 101 4 have have VB cord-287647-0nyquokt 101 5 been be VBN cord-287647-0nyquokt 101 6 a a DT cord-287647-0nyquokt 101 7 predisposing predisposing JJ cord-287647-0nyquokt 101 8 factor factor NN cord-287647-0nyquokt 101 9 to to IN cord-287647-0nyquokt 101 10 the the DT cord-287647-0nyquokt 101 11 ECoV ecov NN cord-287647-0nyquokt 101 12 infection infection NN cord-287647-0nyquokt 101 13 on on IN cord-287647-0nyquokt 101 14 the the DT cord-287647-0nyquokt 101 15 farm farm NN cord-287647-0nyquokt 101 16 . . . cord-287647-0nyquokt 102 1 Two two CD cord-287647-0nyquokt 102 2 positive positive JJ cord-287647-0nyquokt 102 3 samples sample NNS cord-287647-0nyquokt 102 4 were be VBD cord-287647-0nyquokt 102 5 collected collect VBN cord-287647-0nyquokt 102 6 from from IN cord-287647-0nyquokt 102 7 Thoroughbred thoroughbred JJ cord-287647-0nyquokt 102 8 foals foal NNS cord-287647-0nyquokt 102 9 . . . cord-287647-0nyquokt 103 1 A a DT cord-287647-0nyquokt 103 2 faeces faece NNS cord-287647-0nyquokt 103 3 sample sample NN cord-287647-0nyquokt 103 4 collected collect VBN cord-287647-0nyquokt 103 5 from from IN cord-287647-0nyquokt 103 6 one one CD cord-287647-0nyquokt 103 7 foal foal NN cord-287647-0nyquokt 103 8 with with IN cord-287647-0nyquokt 103 9 severe severe JJ cord-287647-0nyquokt 103 10 watery watery JJ cord-287647-0nyquokt 103 11 diarrhoea diarrhoea NN cord-287647-0nyquokt 103 12 and and CC cord-287647-0nyquokt 103 13 inappetance inappetance NN cord-287647-0nyquokt 103 14 was be VBD cord-287647-0nyquokt 103 15 positive positive JJ cord-287647-0nyquokt 103 16 for for IN cord-287647-0nyquokt 103 17 ECoV ECoV NNP cord-287647-0nyquokt 103 18 but but CC cord-287647-0nyquokt 103 19 a a DT cord-287647-0nyquokt 103 20 sample sample NN cord-287647-0nyquokt 103 21 collected collect VBN cord-287647-0nyquokt 103 22 three three CD cord-287647-0nyquokt 103 23 days day NNS cord-287647-0nyquokt 103 24 later later RB cord-287647-0nyquokt 103 25 tested test VBD cord-287647-0nyquokt 103 26 negative negative JJ cord-287647-0nyquokt 103 27 . . . cord-287647-0nyquokt 104 1 A a DT cord-287647-0nyquokt 104 2 potential potential JJ cord-287647-0nyquokt 104 3 difficulty difficulty NN cord-287647-0nyquokt 104 4 in in IN cord-287647-0nyquokt 104 5 detecting detect VBG cord-287647-0nyquokt 104 6 ECoV ecov NN cord-287647-0nyquokt 104 7 from from IN cord-287647-0nyquokt 104 8 naturally naturally RB cord-287647-0nyquokt 104 9 infected infect VBN cord-287647-0nyquokt 104 10 horses horse NNS cord-287647-0nyquokt 104 11 has have VBZ cord-287647-0nyquokt 104 12 been be VBN cord-287647-0nyquokt 104 13 noted note VBN cord-287647-0nyquokt 104 14 previously previously RB cord-287647-0nyquokt 104 15 as as IN cord-287647-0nyquokt 104 16 serial serial JJ cord-287647-0nyquokt 104 17 samples sample NNS cord-287647-0nyquokt 104 18 from from IN cord-287647-0nyquokt 104 19 seven seven CD cord-287647-0nyquokt 104 20 sick sick JJ cord-287647-0nyquokt 104 21 horses horse NNS cord-287647-0nyquokt 104 22 in in IN cord-287647-0nyquokt 104 23 the the DT cord-287647-0nyquokt 104 24 USA USA NNP cord-287647-0nyquokt 104 25 suggested suggest VBD cord-287647-0nyquokt 104 26 that that IN cord-287647-0nyquokt 104 27 ECoV ECoV NNP cord-287647-0nyquokt 104 28 only only RB cord-287647-0nyquokt 104 29 persisted persist VBD cord-287647-0nyquokt 104 30 for for IN cord-287647-0nyquokt 104 31 three three CD cord-287647-0nyquokt 104 32 to to TO cord-287647-0nyquokt 104 33 nine nine CD cord-287647-0nyquokt 104 34 days day NNS cord-287647-0nyquokt 104 35 in in IN cord-287647-0nyquokt 104 36 faeces faece NNS cord-287647-0nyquokt 104 37 [ [ -LRB- cord-287647-0nyquokt 104 38 3 3 CD cord-287647-0nyquokt 104 39 ] ] -RRB- cord-287647-0nyquokt 104 40 . . . cord-287647-0nyquokt 105 1 In in IN cord-287647-0nyquokt 105 2 both both DT cord-287647-0nyquokt 105 3 cases case NNS cord-287647-0nyquokt 105 4 , , , cord-287647-0nyquokt 105 5 the the DT cord-287647-0nyquokt 105 6 diarrhoea diarrhoea NN cord-287647-0nyquokt 105 7 may may MD cord-287647-0nyquokt 105 8 have have VB cord-287647-0nyquokt 105 9 been be VBN cord-287647-0nyquokt 105 10 caused cause VBN cord-287647-0nyquokt 105 11 by by IN cord-287647-0nyquokt 105 12 other other JJ cord-287647-0nyquokt 105 13 unidentified unidentified JJ cord-287647-0nyquokt 105 14 coinfecting coinfecte VBG cord-287647-0nyquokt 105 15 pathogens pathogen NNS cord-287647-0nyquokt 105 16 as as IN cord-287647-0nyquokt 105 17 has have VBZ cord-287647-0nyquokt 105 18 been be VBN cord-287647-0nyquokt 105 19 suggested suggest VBN cord-287647-0nyquokt 105 20 by by IN cord-287647-0nyquokt 105 21 investigators investigator NNS cord-287647-0nyquokt 105 22 in in IN cord-287647-0nyquokt 105 23 the the DT cord-287647-0nyquokt 105 24 USA USA NNP cord-287647-0nyquokt 105 25 [ [ -LRB- cord-287647-0nyquokt 105 26 12 12 CD cord-287647-0nyquokt 105 27 ] ] -RRB- cord-287647-0nyquokt 105 28 . . . cord-287647-0nyquokt 106 1 This this DT cord-287647-0nyquokt 106 2 is be VBZ cord-287647-0nyquokt 106 3 the the DT cord-287647-0nyquokt 106 4 first first JJ cord-287647-0nyquokt 106 5 report report NN cord-287647-0nyquokt 106 6 of of IN cord-287647-0nyquokt 106 7 ECoV ECoV NNP cord-287647-0nyquokt 106 8 detection detection NN cord-287647-0nyquokt 106 9 in in IN cord-287647-0nyquokt 106 10 faeces faece NNS cord-287647-0nyquokt 106 11 samples sample NNS cord-287647-0nyquokt 106 12 from from IN cord-287647-0nyquokt 106 13 both both DT cord-287647-0nyquokt 106 14 foals foal NNS cord-287647-0nyquokt 106 15 and and CC cord-287647-0nyquokt 106 16 adult adult NN cord-287647-0nyquokt 106 17 horses horse NNS cord-287647-0nyquokt 106 18 in in IN cord-287647-0nyquokt 106 19 Ireland Ireland NNP cord-287647-0nyquokt 106 20 . . . cord-287647-0nyquokt 107 1 The the DT cord-287647-0nyquokt 107 2 viruses virus NNS cord-287647-0nyquokt 107 3 identified identify VBN cord-287647-0nyquokt 107 4 in in IN cord-287647-0nyquokt 107 5 Ireland Ireland NNP cord-287647-0nyquokt 107 6 are be VBP cord-287647-0nyquokt 107 7 genetically genetically RB cord-287647-0nyquokt 107 8 closely closely RB cord-287647-0nyquokt 107 9 related relate VBN cord-287647-0nyquokt 107 10 to to IN cord-287647-0nyquokt 107 11 the the DT cord-287647-0nyquokt 107 12 Japanese japanese JJ cord-287647-0nyquokt 107 13 viruses virus NNS cord-287647-0nyquokt 107 14 and and CC cord-287647-0nyquokt 107 15 the the DT cord-287647-0nyquokt 107 16 results result NNS cord-287647-0nyquokt 107 17 of of IN cord-287647-0nyquokt 107 18 this this DT cord-287647-0nyquokt 107 19 study study NN cord-287647-0nyquokt 107 20 give give VBP cord-287647-0nyquokt 107 21 no no DT cord-287647-0nyquokt 107 22 indication indication NN cord-287647-0nyquokt 107 23 of of IN cord-287647-0nyquokt 107 24 significant significant JJ cord-287647-0nyquokt 107 25 genetic genetic JJ cord-287647-0nyquokt 107 26 or or CC cord-287647-0nyquokt 107 27 phenotypic phenotypic JJ cord-287647-0nyquokt 107 28 diversity diversity NN cord-287647-0nyquokt 107 29 . . . cord-287647-0nyquokt 108 1 In in IN cord-287647-0nyquokt 108 2 recent recent JJ cord-287647-0nyquokt 108 3 years year NNS cord-287647-0nyquokt 108 4 , , , cord-287647-0nyquokt 108 5 there there EX cord-287647-0nyquokt 108 6 has have VBZ cord-287647-0nyquokt 108 7 been be VBN cord-287647-0nyquokt 108 8 an an DT cord-287647-0nyquokt 108 9 increase increase NN cord-287647-0nyquokt 108 10 in in IN cord-287647-0nyquokt 108 11 awareness awareness NN cord-287647-0nyquokt 108 12 and and CC cord-287647-0nyquokt 108 13 testing testing NN cord-287647-0nyquokt 108 14 for for IN cord-287647-0nyquokt 108 15 ECoV ECoV NNP cord-287647-0nyquokt 108 16 in in IN cord-287647-0nyquokt 108 17 the the DT cord-287647-0nyquokt 108 18 USA USA NNP cord-287647-0nyquokt 108 19 and and CC cord-287647-0nyquokt 108 20 elsewhere elsewhere RB cord-287647-0nyquokt 108 21 [ [ -LRB- cord-287647-0nyquokt 108 22 10 10 CD cord-287647-0nyquokt 108 23 ] ] -RRB- cord-287647-0nyquokt 108 24 . . . cord-287647-0nyquokt 109 1 Horse horse NN cord-287647-0nyquokt 109 2 breeding breeding NN cord-287647-0nyquokt 109 3 and and CC cord-287647-0nyquokt 109 4 racing racing NN cord-287647-0nyquokt 109 5 activities activity NNS cord-287647-0nyquokt 109 6 in in IN cord-287647-0nyquokt 109 7 Ireland Ireland NNP cord-287647-0nyquokt 109 8 are be VBP cord-287647-0nyquokt 109 9 the the DT cord-287647-0nyquokt 109 10 most most RBS cord-287647-0nyquokt 109 11 prominent prominent JJ cord-287647-0nyquokt 109 12 and and CC cord-287647-0nyquokt 109 13 important important JJ cord-287647-0nyquokt 109 14 of of IN cord-287647-0nyquokt 109 15 any any DT cord-287647-0nyquokt 109 16 country country NN cord-287647-0nyquokt 109 17 on on IN cord-287647-0nyquokt 109 18 a a DT cord-287647-0nyquokt 109 19 per per FW cord-287647-0nyquokt 109 20 capita capita FW cord-287647-0nyquokt 109 21 basis basis NN cord-287647-0nyquokt 109 22 . . . cord-287647-0nyquokt 110 1 There there EX cord-287647-0nyquokt 110 2 are be VBP cord-287647-0nyquokt 110 3 over over IN cord-287647-0nyquokt 110 4 50 50 CD cord-287647-0nyquokt 110 5 Thoroughbred thoroughbred JJ cord-287647-0nyquokt 110 6 horses horse NNS cord-287647-0nyquokt 110 7 per per IN cord-287647-0nyquokt 110 8 10,000 10,000 CD cord-287647-0nyquokt 110 9 of of IN cord-287647-0nyquokt 110 10 population population NN cord-287647-0nyquokt 110 11 in in IN cord-287647-0nyquokt 110 12 Ireland Ireland NNP cord-287647-0nyquokt 110 13 , , , cord-287647-0nyquokt 110 14 compared compare VBN cord-287647-0nyquokt 110 15 to to IN cord-287647-0nyquokt 110 16 between between IN cord-287647-0nyquokt 110 17 three three CD cord-287647-0nyquokt 110 18 and and CC cord-287647-0nyquokt 110 19 five five CD cord-287647-0nyquokt 110 20 for for IN cord-287647-0nyquokt 110 21 Great Great NNP cord-287647-0nyquokt 110 22 Britain Britain NNP cord-287647-0nyquokt 110 23 , , , cord-287647-0nyquokt 110 24 France France NNP cord-287647-0nyquokt 110 25 and and CC cord-287647-0nyquokt 110 26 the the DT cord-287647-0nyquokt 110 27 USA USA NNP cord-287647-0nyquokt 110 28 [ [ -LRB- cord-287647-0nyquokt 110 29 19 19 CD cord-287647-0nyquokt 110 30 ] ] -RRB- cord-287647-0nyquokt 110 31 . . . cord-287647-0nyquokt 111 1 Thus thus RB cord-287647-0nyquokt 111 2 , , , cord-287647-0nyquokt 111 3 an an DT cord-287647-0nyquokt 111 4 investigation investigation NN cord-287647-0nyquokt 111 5 of of IN cord-287647-0nyquokt 111 6 ECoV ECoV NNP cord-287647-0nyquokt 111 7 in in IN cord-287647-0nyquokt 111 8 Ireland Ireland NNP cord-287647-0nyquokt 111 9 is be VBZ cord-287647-0nyquokt 111 10 pertinent pertinent JJ cord-287647-0nyquokt 111 11 not not RB cord-287647-0nyquokt 111 12 only only RB cord-287647-0nyquokt 111 13 to to TO cord-287647-0nyquokt 111 14 increase increase VB cord-287647-0nyquokt 111 15 awareness awareness NN cord-287647-0nyquokt 111 16 nationally nationally RB cord-287647-0nyquokt 111 17 of of IN cord-287647-0nyquokt 111 18 the the DT cord-287647-0nyquokt 111 19 epidemiology epidemiology NN cord-287647-0nyquokt 111 20 of of IN cord-287647-0nyquokt 111 21 the the DT cord-287647-0nyquokt 111 22 virus virus NN cord-287647-0nyquokt 111 23 and and CC cord-287647-0nyquokt 111 24 promote promote VB cord-287647-0nyquokt 111 25 discussion discussion NN cord-287647-0nyquokt 111 26 on on IN cord-287647-0nyquokt 111 27 its -PRON- PRP$ cord-287647-0nyquokt 111 28 clinical clinical JJ cord-287647-0nyquokt 111 29 importance importance NN cord-287647-0nyquokt 111 30 , , , cord-287647-0nyquokt 111 31 but but CC cord-287647-0nyquokt 111 32 also also RB cord-287647-0nyquokt 111 33 to to TO cord-287647-0nyquokt 111 34 inform inform VB cord-287647-0nyquokt 111 35 the the DT cord-287647-0nyquokt 111 36 industry industry NN cord-287647-0nyquokt 111 37 globally globally RB cord-287647-0nyquokt 111 38 of of IN cord-287647-0nyquokt 111 39 the the DT cord-287647-0nyquokt 111 40 health health NN cord-287647-0nyquokt 111 41 status status NN cord-287647-0nyquokt 111 42 of of IN cord-287647-0nyquokt 111 43 Irish irish JJ cord-287647-0nyquokt 111 44 horses horse NNS cord-287647-0nyquokt 111 45 . . . cord-287647-0nyquokt 112 1 Ireland Ireland NNP cord-287647-0nyquokt 112 2 exports export VBZ cord-287647-0nyquokt 112 3 horses horse NNS cord-287647-0nyquokt 112 4 all all RB cord-287647-0nyquokt 112 5 over over IN cord-287647-0nyquokt 112 6 the the DT cord-287647-0nyquokt 112 7 world world NN cord-287647-0nyquokt 112 8 . . . cord-287647-0nyquokt 113 1 By by IN cord-287647-0nyquokt 113 2 illustration illustration NN cord-287647-0nyquokt 113 3 , , , cord-287647-0nyquokt 113 4 in in IN cord-287647-0nyquokt 113 5 2016 2016 CD cord-287647-0nyquokt 113 6 the the DT cord-287647-0nyquokt 113 7 country country NN cord-287647-0nyquokt 113 8 was be VBD cord-287647-0nyquokt 113 9 the the DT cord-287647-0nyquokt 113 10 second second RB cord-287647-0nyquokt 113 11 biggest big JJS cord-287647-0nyquokt 113 12 seller seller NN cord-287647-0nyquokt 113 13 of of IN cord-287647-0nyquokt 113 14 bloodstock bloodstock NN cord-287647-0nyquokt 113 15 at at IN cord-287647-0nyquokt 113 16 public public JJ cord-287647-0nyquokt 113 17 auctions auction NNS cord-287647-0nyquokt 113 18 second second JJ cord-287647-0nyquokt 113 19 only only RB cord-287647-0nyquokt 113 20 to to IN cord-287647-0nyquokt 113 21 the the DT cord-287647-0nyquokt 113 22 USA USA NNP cord-287647-0nyquokt 113 23 [ [ -LRB- cord-287647-0nyquokt 113 24 19 19 CD cord-287647-0nyquokt 113 25 ] ] -RRB- cord-287647-0nyquokt 113 26 . . . cord-287647-0nyquokt 114 1 Many many JJ cord-287647-0nyquokt 114 2 questions question NNS cord-287647-0nyquokt 114 3 remain remain VBP cord-287647-0nyquokt 114 4 with with IN cord-287647-0nyquokt 114 5 regard regard NN cord-287647-0nyquokt 114 6 to to IN cord-287647-0nyquokt 114 7 the the DT cord-287647-0nyquokt 114 8 clinical clinical JJ cord-287647-0nyquokt 114 9 significance significance NN cord-287647-0nyquokt 114 10 of of IN cord-287647-0nyquokt 114 11 ECoV. ECoV. NNS cord-287647-0nyquokt 115 1 The the DT cord-287647-0nyquokt 115 2 outbreak outbreak NN cord-287647-0nyquokt 115 3 at at IN cord-287647-0nyquokt 115 4 a a DT cord-287647-0nyquokt 115 5 draft draft NN cord-287647-0nyquokt 115 6 - - HYPH cord-287647-0nyquokt 115 7 horse horse NN cord-287647-0nyquokt 115 8 racetrack racetrack NN cord-287647-0nyquokt 115 9 in in IN cord-287647-0nyquokt 115 10 Japan Japan NNP cord-287647-0nyquokt 115 11 in in IN cord-287647-0nyquokt 115 12 2009 2009 CD cord-287647-0nyquokt 115 13 affected affect VBD cord-287647-0nyquokt 115 14 132 132 CD cord-287647-0nyquokt 115 15 of of IN cord-287647-0nyquokt 115 16 approximately approximately RB cord-287647-0nyquokt 115 17 600 600 CD cord-287647-0nyquokt 115 18 horses horse NNS cord-287647-0nyquokt 115 19 and and CC cord-287647-0nyquokt 115 20 resulted result VBD cord-287647-0nyquokt 115 21 in in IN cord-287647-0nyquokt 115 22 non non JJ cord-287647-0nyquokt 115 23 - - NNS cord-287647-0nyquokt 115 24 starters starter NNS cord-287647-0nyquokt 115 25 and and CC cord-287647-0nyquokt 115 26 the the DT cord-287647-0nyquokt 115 27 implementation implementation NN cord-287647-0nyquokt 115 28 of of IN cord-287647-0nyquokt 115 29 movement movement NN cord-287647-0nyquokt 115 30 restrictions restriction NNS cord-287647-0nyquokt 115 31 [ [ -LRB- cord-287647-0nyquokt 115 32 4 4 CD cord-287647-0nyquokt 115 33 ] ] -RRB- cord-287647-0nyquokt 115 34 . . . cord-287647-0nyquokt 116 1 However however RB cord-287647-0nyquokt 116 2 , , , cord-287647-0nyquokt 116 3 draft draft NN cord-287647-0nyquokt 116 4 horses horse NNS cord-287647-0nyquokt 116 5 appear appear VBP cord-287647-0nyquokt 116 6 to to TO cord-287647-0nyquokt 116 7 have have VB cord-287647-0nyquokt 116 8 a a DT cord-287647-0nyquokt 116 9 higher high JJR cord-287647-0nyquokt 116 10 infection infection NN cord-287647-0nyquokt 116 11 rate rate NN cord-287647-0nyquokt 116 12 than than IN cord-287647-0nyquokt 116 13 other other JJ cord-287647-0nyquokt 116 14 breeds breed NNS cord-287647-0nyquokt 116 15 and and CC cord-287647-0nyquokt 116 16 an an DT cord-287647-0nyquokt 116 17 outbreak outbreak NN cord-287647-0nyquokt 116 18 of of IN cord-287647-0nyquokt 116 19 similar similar JJ cord-287647-0nyquokt 116 20 severity severity NN cord-287647-0nyquokt 116 21 has have VBZ cord-287647-0nyquokt 116 22 not not RB cord-287647-0nyquokt 116 23 been be VBN cord-287647-0nyquokt 116 24 reported report VBN cord-287647-0nyquokt 116 25 in in IN cord-287647-0nyquokt 116 26 Thoroughbred Thoroughbred NNP cord-287647-0nyquokt 116 27 racehorses racehorse NNS cord-287647-0nyquokt 116 28 [ [ -LRB- cord-287647-0nyquokt 116 29 10 10 CD cord-287647-0nyquokt 116 30 , , , cord-287647-0nyquokt 116 31 20 20 CD cord-287647-0nyquokt 116 32 ] ] -RRB- cord-287647-0nyquokt 116 33 . . . cord-287647-0nyquokt 117 1 The the DT cord-287647-0nyquokt 117 2 much much RB cord-287647-0nyquokt 117 3 higher high JJR cord-287647-0nyquokt 117 4 incidence incidence NN cord-287647-0nyquokt 117 5 of of IN cord-287647-0nyquokt 117 6 ECoV ecov JJ cord-287647-0nyquokt 117 7 positive positive JJ cord-287647-0nyquokt 117 8 Thoroughbred Thoroughbred NNP cord-287647-0nyquokt 117 9 foals foal NNS cord-287647-0nyquokt 117 10 identified identify VBN cord-287647-0nyquokt 117 11 in in IN cord-287647-0nyquokt 117 12 Kentucky Kentucky NNP cord-287647-0nyquokt 117 13 compared compare VBN cord-287647-0nyquokt 117 14 to to IN cord-287647-0nyquokt 117 15 similar similar JJ cord-287647-0nyquokt 117 16 populations population NNS cord-287647-0nyquokt 117 17 internationally internationally RB cord-287647-0nyquokt 117 18 suggests suggest VBZ cord-287647-0nyquokt 117 19 an an DT cord-287647-0nyquokt 117 20 increased increase VBN cord-287647-0nyquokt 117 21 susceptibility susceptibility NN cord-287647-0nyquokt 117 22 to to IN cord-287647-0nyquokt 117 23 ECoV ecov NN cord-287647-0nyquokt 117 24 infection infection NN cord-287647-0nyquokt 117 25 in in IN cord-287647-0nyquokt 117 26 that that DT cord-287647-0nyquokt 117 27 population population NN cord-287647-0nyquokt 117 28 . . . cord-287647-0nyquokt 118 1 In in IN cord-287647-0nyquokt 118 2 the the DT cord-287647-0nyquokt 118 3 past past NN cord-287647-0nyquokt 118 4 , , , cord-287647-0nyquokt 118 5 specific specific JJ cord-287647-0nyquokt 118 6 environmental environmental JJ cord-287647-0nyquokt 118 7 factors factor NNS cord-287647-0nyquokt 118 8 were be VBD cord-287647-0nyquokt 118 9 associated associate VBN cord-287647-0nyquokt 118 10 with with IN cord-287647-0nyquokt 118 11 extensive extensive JJ cord-287647-0nyquokt 118 12 reproductive reproductive JJ cord-287647-0nyquokt 118 13 loss loss NN cord-287647-0nyquokt 118 14 in in IN cord-287647-0nyquokt 118 15 the the DT cord-287647-0nyquokt 118 16 Kentucky Kentucky NNP cord-287647-0nyquokt 118 17 area area NN cord-287647-0nyquokt 118 18 and and CC cord-287647-0nyquokt 118 19 to to IN cord-287647-0nyquokt 118 20 a a DT cord-287647-0nyquokt 118 21 lesser less JJR cord-287647-0nyquokt 118 22 extent extent NN cord-287647-0nyquokt 118 23 in in IN cord-287647-0nyquokt 118 24 other other JJ cord-287647-0nyquokt 118 25 states state NNS cord-287647-0nyquokt 118 26 [ [ -LRB- cord-287647-0nyquokt 118 27 21 21 CD cord-287647-0nyquokt 118 28 ] ] -RRB- cord-287647-0nyquokt 118 29 , , , cord-287647-0nyquokt 118 30 but but CC cord-287647-0nyquokt 118 31 predisposing predispose VBG cord-287647-0nyquokt 118 32 regional regional JJ cord-287647-0nyquokt 118 33 factors factor NNS cord-287647-0nyquokt 118 34 such such JJ cord-287647-0nyquokt 118 35 as as IN cord-287647-0nyquokt 118 36 differences difference NNS cord-287647-0nyquokt 118 37 in in IN cord-287647-0nyquokt 118 38 management management NN cord-287647-0nyquokt 118 39 , , , cord-287647-0nyquokt 118 40 environment environment NN cord-287647-0nyquokt 118 41 or or CC cord-287647-0nyquokt 118 42 husbandry husbandry NN cord-287647-0nyquokt 118 43 have have VBP cord-287647-0nyquokt 118 44 not not RB cord-287647-0nyquokt 118 45 been be VBN cord-287647-0nyquokt 118 46 identified identify VBN cord-287647-0nyquokt 118 47 for for IN cord-287647-0nyquokt 118 48 ECoV. ECoV. NNS cord-287647-0nyquokt 119 1 It -PRON- PRP cord-287647-0nyquokt 119 2 has have VBZ cord-287647-0nyquokt 119 3 been be VBN cord-287647-0nyquokt 119 4 suggested suggest VBN cord-287647-0nyquokt 119 5 that that IN cord-287647-0nyquokt 119 6 ECoV ECoV NNP cord-287647-0nyquokt 119 7 is be VBZ cord-287647-0nyquokt 119 8 a a DT cord-287647-0nyquokt 119 9 coinfecting coinfecte VBG cord-287647-0nyquokt 119 10 agent agent NN cord-287647-0nyquokt 119 11 in in IN cord-287647-0nyquokt 119 12 foals foal NNS cord-287647-0nyquokt 119 13 with with IN cord-287647-0nyquokt 119 14 diarrhoea diarrhoea NN cord-287647-0nyquokt 119 15 and and CC cord-287647-0nyquokt 119 16 clinical clinical JJ cord-287647-0nyquokt 119 17 infections infection NNS cord-287647-0nyquokt 119 18 have have VBP cord-287647-0nyquokt 119 19 predominantly predominantly RB cord-287647-0nyquokt 119 20 been be VBN cord-287647-0nyquokt 119 21 reported report VBN cord-287647-0nyquokt 119 22 in in IN cord-287647-0nyquokt 119 23 adult adult NN cord-287647-0nyquokt 119 24 horses horse NNS cord-287647-0nyquokt 119 25 with with IN cord-287647-0nyquokt 119 26 a a DT cord-287647-0nyquokt 119 27 mono mono NN cord-287647-0nyquokt 119 28 - - HYPH cord-287647-0nyquokt 119 29 infection infection NN cord-287647-0nyquokt 119 30 with with IN cord-287647-0nyquokt 119 31 EcoV EcoV NNP cord-287647-0nyquokt 119 32 [ [ -LRB- cord-287647-0nyquokt 119 33 10 10 CD cord-287647-0nyquokt 119 34 ] ] -RRB- cord-287647-0nyquokt 119 35 . . . cord-287647-0nyquokt 120 1 There there EX cord-287647-0nyquokt 120 2 was be VBD cord-287647-0nyquokt 120 3 no no DT cord-287647-0nyquokt 120 4 indication indication NN cord-287647-0nyquokt 120 5 from from IN cord-287647-0nyquokt 120 6 the the DT cord-287647-0nyquokt 120 7 results result NNS cord-287647-0nyquokt 120 8 of of IN cord-287647-0nyquokt 120 9 this this DT cord-287647-0nyquokt 120 10 study study NN cord-287647-0nyquokt 120 11 that that IN cord-287647-0nyquokt 120 12 coronavirus coronavirus NN cord-287647-0nyquokt 120 13 is be VBZ cord-287647-0nyquokt 120 14 a a DT cord-287647-0nyquokt 120 15 major major JJ cord-287647-0nyquokt 120 16 cause cause NN cord-287647-0nyquokt 120 17 of of IN cord-287647-0nyquokt 120 18 diarrhoea diarrhoea NN cord-287647-0nyquokt 120 19 in in IN cord-287647-0nyquokt 120 20 Irish irish JJ cord-287647-0nyquokt 120 21 horses horse NNS cord-287647-0nyquokt 120 22 but but CC cord-287647-0nyquokt 120 23 the the DT cord-287647-0nyquokt 120 24 introduction introduction NN cord-287647-0nyquokt 120 25 of of IN cord-287647-0nyquokt 120 26 rRT rRT NNP cord-287647-0nyquokt 120 27 - - HYPH cord-287647-0nyquokt 120 28 PCR PCR NNP cord-287647-0nyquokt 120 29 as as IN cord-287647-0nyquokt 120 30 a a DT cord-287647-0nyquokt 120 31 routine routine JJ cord-287647-0nyquokt 120 32 diagnostic diagnostic JJ cord-287647-0nyquokt 120 33 test test NN cord-287647-0nyquokt 120 34 will will MD cord-287647-0nyquokt 120 35 assist assist VB cord-287647-0nyquokt 120 36 in in IN cord-287647-0nyquokt 120 37 elucidating elucidate VBG cord-287647-0nyquokt 120 38 the the DT cord-287647-0nyquokt 120 39 significance significance NN cord-287647-0nyquokt 120 40 of of IN cord-287647-0nyquokt 120 41 this this DT cord-287647-0nyquokt 120 42 virus virus NN cord-287647-0nyquokt 120 43 to to IN cord-287647-0nyquokt 120 44 the the DT cord-287647-0nyquokt 120 45 Irish irish JJ cord-287647-0nyquokt 120 46 breeding breeding NN cord-287647-0nyquokt 120 47 , , , cord-287647-0nyquokt 120 48 racing racing NN cord-287647-0nyquokt 120 49 and and CC cord-287647-0nyquokt 120 50 sports sport NNS cord-287647-0nyquokt 120 51 industries industry NNS cord-287647-0nyquokt 120 52 . . . cord-287647-0nyquokt 121 1 The the DT cord-287647-0nyquokt 121 2 primary primary JJ cord-287647-0nyquokt 121 3 focus focus NN cord-287647-0nyquokt 121 4 in in IN cord-287647-0nyquokt 121 5 future future NN cord-287647-0nyquokt 121 6 will will MD cord-287647-0nyquokt 121 7 be be VB cord-287647-0nyquokt 121 8 on on IN cord-287647-0nyquokt 121 9 testing test VBG cord-287647-0nyquokt 121 10 adult adult NN cord-287647-0nyquokt 121 11 horses horse NNS cord-287647-0nyquokt 121 12 that that WDT cord-287647-0nyquokt 121 13 present present VBP cord-287647-0nyquokt 121 14 with with IN cord-287647-0nyquokt 121 15 anorexia anorexia NN cord-287647-0nyquokt 121 16 , , , cord-287647-0nyquokt 121 17 lethargy lethargy NN cord-287647-0nyquokt 121 18 , , , cord-287647-0nyquokt 121 19 fever fever NN cord-287647-0nyquokt 121 20 and and CC cord-287647-0nyquokt 121 21 changes change NNS cord-287647-0nyquokt 121 22 in in IN cord-287647-0nyquokt 121 23 faecal faecal JJ cord-287647-0nyquokt 121 24 character character NN cord-287647-0nyquokt 121 25 as as IN cord-287647-0nyquokt 121 26 a a DT cord-287647-0nyquokt 121 27 significant significant JJ cord-287647-0nyquokt 121 28 association association NN cord-287647-0nyquokt 121 29 has have VBZ cord-287647-0nyquokt 121 30 been be VBN cord-287647-0nyquokt 121 31 demonstrated demonstrate VBN cord-287647-0nyquokt 121 32 between between IN cord-287647-0nyquokt 121 33 this this DT cord-287647-0nyquokt 121 34 clinical clinical JJ cord-287647-0nyquokt 121 35 status status NN cord-287647-0nyquokt 121 36 and and CC cord-287647-0nyquokt 121 37 molecular molecular JJ cord-287647-0nyquokt 121 38 detection detection NN cord-287647-0nyquokt 121 39 of of IN cord-287647-0nyquokt 121 40 ECoV ECoV NNP cord-287647-0nyquokt 121 41 in in IN cord-287647-0nyquokt 121 42 faeces faece NNS cord-287647-0nyquokt 121 43 [ [ -LRB- cord-287647-0nyquokt 121 44 11 11 CD cord-287647-0nyquokt 121 45 ] ] -RRB- cord-287647-0nyquokt 121 46 . . . cord-287647-0nyquokt 121 47 _SP cord-287647-0nyquokt 122 1 Complete complete JJ cord-287647-0nyquokt 122 2 genome genome NN cord-287647-0nyquokt 122 3 analysis analysis NN cord-287647-0nyquokt 122 4 of of IN cord-287647-0nyquokt 122 5 equine equine JJ cord-287647-0nyquokt 122 6 coronavirus coronavirus NN cord-287647-0nyquokt 122 7 isolated isolate VBN cord-287647-0nyquokt 122 8 in in IN cord-287647-0nyquokt 122 9 Japan Japan NNP cord-287647-0nyquokt 122 10 Genomic Genomic NNP cord-287647-0nyquokt 122 11 characterization characterization NN cord-287647-0nyquokt 122 12 of of IN cord-287647-0nyquokt 122 13 equine equine JJ cord-287647-0nyquokt 122 14 coronavirus coronavirus NN cord-287647-0nyquokt 122 15 Emerging emerge VBG cord-287647-0nyquokt 122 16 outbreaks outbreak NNS cord-287647-0nyquokt 122 17 associated associate VBN cord-287647-0nyquokt 122 18 with with IN cord-287647-0nyquokt 122 19 equine equine JJ cord-287647-0nyquokt 122 20 coronavirus coronavirus NN cord-287647-0nyquokt 122 21 in in IN cord-287647-0nyquokt 122 22 adult adult NN cord-287647-0nyquokt 122 23 horses horse NNS cord-287647-0nyquokt 122 24 Isolation isolation NN cord-287647-0nyquokt 122 25 of of IN cord-287647-0nyquokt 122 26 an an DT cord-287647-0nyquokt 122 27 equine equine JJ cord-287647-0nyquokt 122 28 coronavirus coronavirus NN cord-287647-0nyquokt 122 29 from from IN cord-287647-0nyquokt 122 30 adult adult NN cord-287647-0nyquokt 122 31 horses horse NNS cord-287647-0nyquokt 122 32 with with IN cord-287647-0nyquokt 122 33 pyrogenic pyrogenic JJ cord-287647-0nyquokt 122 34 and and CC cord-287647-0nyquokt 122 35 enteric enteric JJ cord-287647-0nyquokt 122 36 disease disease NN cord-287647-0nyquokt 122 37 and and CC cord-287647-0nyquokt 122 38 its -PRON- PRP$ cord-287647-0nyquokt 122 39 antigenic antigenic JJ cord-287647-0nyquokt 122 40 and and CC cord-287647-0nyquokt 122 41 genomic genomic JJ cord-287647-0nyquokt 122 42 characterization characterization NN cord-287647-0nyquokt 122 43 in in IN cord-287647-0nyquokt 122 44 comparison comparison NN cord-287647-0nyquokt 122 45 with with IN cord-287647-0nyquokt 122 46 the the DT cord-287647-0nyquokt 122 47 NC99 NC99 NNP cord-287647-0nyquokt 122 48 strain strain NN cord-287647-0nyquokt 122 49 Epidemic epidemic NN cord-287647-0nyquokt 122 50 of of IN cord-287647-0nyquokt 122 51 equine equine JJ cord-287647-0nyquokt 122 52 coronavirus coronavirus NN cord-287647-0nyquokt 122 53 at at IN cord-287647-0nyquokt 122 54 Obihiro Obihiro NNP cord-287647-0nyquokt 122 55 Racecourse Racecourse NNP cord-287647-0nyquokt 122 56 , , , cord-287647-0nyquokt 122 57 Hokkaido Hokkaido NNP cord-287647-0nyquokt 122 58 , , , cord-287647-0nyquokt 122 59 Japan Japan NNP cord-287647-0nyquokt 122 60 in in IN cord-287647-0nyquokt 122 61 2012 2012 CD cord-287647-0nyquokt 122 62 Prevalence prevalence NN cord-287647-0nyquokt 122 63 of of IN cord-287647-0nyquokt 122 64 disease disease NN cord-287647-0nyquokt 122 65 with with IN cord-287647-0nyquokt 122 66 inference inference NN cord-287647-0nyquokt 122 67 of of IN cord-287647-0nyquokt 122 68 equine equine JJ cord-287647-0nyquokt 122 69 coronavirus coronavirus NN cord-287647-0nyquokt 122 70 infection infection NN cord-287647-0nyquokt 122 71 among among IN cord-287647-0nyquokt 122 72 horses horse NNS cord-287647-0nyquokt 122 73 stabled stable VBN cord-287647-0nyquokt 122 74 in in IN cord-287647-0nyquokt 122 75 a a DT cord-287647-0nyquokt 122 76 draft draft NN cord-287647-0nyquokt 122 77 - - HYPH cord-287647-0nyquokt 122 78 horse horse NN cord-287647-0nyquokt 122 79 racecourse racecourse NN cord-287647-0nyquokt 122 80 Experimental experimental JJ cord-287647-0nyquokt 122 81 inoculation inoculation NN cord-287647-0nyquokt 122 82 of of IN cord-287647-0nyquokt 122 83 equine equine JJ cord-287647-0nyquokt 122 84 coronavirus coronavirus NN cord-287647-0nyquokt 122 85 into into IN cord-287647-0nyquokt 122 86 Japanese japanese JJ cord-287647-0nyquokt 122 87 draft draft NN cord-287647-0nyquokt 122 88 horses horse NNS cord-287647-0nyquokt 123 1 Prevalence prevalence NN cord-287647-0nyquokt 123 2 of of IN cord-287647-0nyquokt 123 3 equine equine JJ cord-287647-0nyquokt 123 4 coronavirus coronavirus NN cord-287647-0nyquokt 123 5 in in IN cord-287647-0nyquokt 123 6 nasal nasal JJ cord-287647-0nyquokt 123 7 secretions secretion NNS cord-287647-0nyquokt 123 8 from from IN cord-287647-0nyquokt 123 9 horses horse NNS cord-287647-0nyquokt 123 10 with with IN cord-287647-0nyquokt 123 11 fever fever NN cord-287647-0nyquokt 123 12 and and CC cord-287647-0nyquokt 123 13 upper upper JJ cord-287647-0nyquokt 123 14 respiratory respiratory JJ cord-287647-0nyquokt 123 15 tract tract NN cord-287647-0nyquokt 123 16 infection infection NN cord-287647-0nyquokt 124 1 First first JJ cord-287647-0nyquokt 124 2 detection detection NN cord-287647-0nyquokt 124 3 of of IN cord-287647-0nyquokt 124 4 equine equine JJ cord-287647-0nyquokt 124 5 coronavirus coronavirus NN cord-287647-0nyquokt 124 6 ( ( -LRB- cord-287647-0nyquokt 124 7 ECoV ECoV NNP cord-287647-0nyquokt 124 8 ) ) -RRB- cord-287647-0nyquokt 124 9 in in IN cord-287647-0nyquokt 124 10 Europe Europe NNP cord-287647-0nyquokt 124 11 Enteric enteric JJ cord-287647-0nyquokt 124 12 coronavirus coronavirus NN cord-287647-0nyquokt 124 13 infection infection NN cord-287647-0nyquokt 124 14 in in IN cord-287647-0nyquokt 124 15 adult adult NN cord-287647-0nyquokt 124 16 horses horse NNS cord-287647-0nyquokt 124 17 Equine equine JJ cord-287647-0nyquokt 124 18 coronavirus coronavirus NN cord-287647-0nyquokt 124 19 : : : cord-287647-0nyquokt 124 20 An an DT cord-287647-0nyquokt 124 21 emerging emerge VBG cord-287647-0nyquokt 124 22 enteric enteric JJ cord-287647-0nyquokt 124 23 virus virus NN cord-287647-0nyquokt 124 24 of of IN cord-287647-0nyquokt 124 25 adult adult NN cord-287647-0nyquokt 124 26 horses horse NNS cord-287647-0nyquokt 124 27 . . . cord-287647-0nyquokt 125 1 Equine equine JJ cord-287647-0nyquokt 125 2 Vet Vet NNP cord-287647-0nyquokt 125 3 Infectious infectious JJ cord-287647-0nyquokt 125 4 agents agent NNS cord-287647-0nyquokt 125 5 associated associate VBN cord-287647-0nyquokt 125 6 with with IN cord-287647-0nyquokt 125 7 diarrhoea diarrhoea NN cord-287647-0nyquokt 125 8 in in IN cord-287647-0nyquokt 125 9 neonatal neonatal JJ cord-287647-0nyquokt 125 10 foals foal NNS cord-287647-0nyquokt 125 11 in in IN cord-287647-0nyquokt 125 12 central central JJ cord-287647-0nyquokt 125 13 Kentucky Kentucky NNP cord-287647-0nyquokt 125 14 : : : cord-287647-0nyquokt 125 15 A a DT cord-287647-0nyquokt 125 16 comprehensive comprehensive JJ cord-287647-0nyquokt 125 17 molecular molecular JJ cord-287647-0nyquokt 125 18 study study NN cord-287647-0nyquokt 125 19 Low low JJ cord-287647-0nyquokt 125 20 prevalence prevalence NN cord-287647-0nyquokt 125 21 of of IN cord-287647-0nyquokt 125 22 equine equine JJ cord-287647-0nyquokt 125 23 coronavirus coronavirus NN cord-287647-0nyquokt 125 24 in in IN cord-287647-0nyquokt 125 25 foals foal NNS cord-287647-0nyquokt 125 26 in in IN cord-287647-0nyquokt 125 27 the the DT cord-287647-0nyquokt 125 28 largest large JJS cord-287647-0nyquokt 125 29 Thoroughbred thoroughbred JJ cord-287647-0nyquokt 125 30 horse horse NN cord-287647-0nyquokt 125 31 breeding breeding NN cord-287647-0nyquokt 125 32 region region NN cord-287647-0nyquokt 125 33 of of IN cord-287647-0nyquokt 125 34 Japan Japan NNP cord-287647-0nyquokt 125 35 Detection Detection NNP cord-287647-0nyquokt 125 36 of of IN cord-287647-0nyquokt 125 37 equine equine JJ cord-287647-0nyquokt 125 38 coronavirus coronavirus NN cord-287647-0nyquokt 125 39 in in IN cord-287647-0nyquokt 125 40 horses horse NNS cord-287647-0nyquokt 125 41 in in IN cord-287647-0nyquokt 125 42 the the DT cord-287647-0nyquokt 125 43 United United NNP cord-287647-0nyquokt 125 44 Kingdom Kingdom NNP cord-287647-0nyquokt 125 45 Coronavirus Coronavirus NNP cord-287647-0nyquokt 125 46 infections infection NNS cord-287647-0nyquokt 125 47 in in IN cord-287647-0nyquokt 125 48 horses horse NNS cord-287647-0nyquokt 125 49 in in IN cord-287647-0nyquokt 125 50 Saudi Saudi NNP cord-287647-0nyquokt 125 51 Arabia Arabia NNP cord-287647-0nyquokt 125 52 and and CC cord-287647-0nyquokt 125 53 Oman Oman NNP cord-287647-0nyquokt 125 54 Rapid Rapid NNP cord-287647-0nyquokt 125 55 detection detection NN cord-287647-0nyquokt 125 56 of of IN cord-287647-0nyquokt 125 57 equine equine JJ cord-287647-0nyquokt 125 58 coronavirus coronavirus NN cord-287647-0nyquokt 125 59 by by IN cord-287647-0nyquokt 125 60 reverse reverse JJ cord-287647-0nyquokt 125 61 transcription transcription NN cord-287647-0nyquokt 125 62 loop loop NN cord-287647-0nyquokt 125 63 - - HYPH cord-287647-0nyquokt 125 64 mediated mediate VBN cord-287647-0nyquokt 125 65 isothermal isothermal JJ cord-287647-0nyquokt 125 66 amplification amplification NN cord-287647-0nyquokt 125 67 Molecular molecular JJ cord-287647-0nyquokt 125 68 evolutionary evolutionary JJ cord-287647-0nyquokt 125 69 genetics genetics NN cord-287647-0nyquokt 125 70 analysis analysis NN cord-287647-0nyquokt 125 71 using use VBG cord-287647-0nyquokt 125 72 maximum maximum JJ cord-287647-0nyquokt 125 73 likelihood likelihood NN cord-287647-0nyquokt 125 74 , , , cord-287647-0nyquokt 125 75 evolutionary evolutionary JJ cord-287647-0nyquokt 125 76 distance distance NN cord-287647-0nyquokt 125 77 , , , cord-287647-0nyquokt 125 78 and and CC cord-287647-0nyquokt 125 79 maximum maximum JJ cord-287647-0nyquokt 125 80 parsimony parsimony NN cord-287647-0nyquokt 125 81 methods method NNS cord-287647-0nyquokt 125 82 Economic economic JJ cord-287647-0nyquokt 125 83 Impact Impact NNP cord-287647-0nyquokt 125 84 of of IN cord-287647-0nyquokt 125 85 Irish Irish NNP cord-287647-0nyquokt 125 86 Breeding Breeding NNP cord-287647-0nyquokt 125 87 and and CC cord-287647-0nyquokt 125 88 Racing Racing NNP cord-287647-0nyquokt 125 89 Seroprevalence Seroprevalence NNP cord-287647-0nyquokt 125 90 and and CC cord-287647-0nyquokt 125 91 risk risk NN cord-287647-0nyquokt 125 92 factors factor NNS cord-287647-0nyquokt 125 93 for for IN cord-287647-0nyquokt 125 94 infection infection NN cord-287647-0nyquokt 125 95 with with IN cord-287647-0nyquokt 125 96 equine equine JJ cord-287647-0nyquokt 125 97 coronavirus coronavirus NN cord-287647-0nyquokt 125 98 in in IN cord-287647-0nyquokt 125 99 healthy healthy JJ cord-287647-0nyquokt 125 100 horses horse NNS cord-287647-0nyquokt 125 101 in in IN cord-287647-0nyquokt 125 102 the the DT cord-287647-0nyquokt 125 103 USA USA NNP cord-287647-0nyquokt 125 104 Review Review NNP cord-287647-0nyquokt 125 105 Paper Paper NNP cord-287647-0nyquokt 125 106 : : : cord-287647-0nyquokt 126 1 Mare Mare NNP cord-287647-0nyquokt 126 2 Reproductive Reproductive NNP cord-287647-0nyquokt 126 3 Loss Loss NNP cord-287647-0nyquokt 126 4 Syndrome Syndrome NNP cord-287647-0nyquokt 127 1 This this DT cord-287647-0nyquokt 127 2 article article NN cord-287647-0nyquokt 127 3 is be VBZ cord-287647-0nyquokt 127 4 an an DT cord-287647-0nyquokt 127 5 open open JJ cord-287647-0nyquokt 127 6 access access NN cord-287647-0nyquokt 127 7 article article NN cord-287647-0nyquokt 127 8 distributed distribute VBN cord-287647-0nyquokt 127 9 under under IN cord-287647-0nyquokt 127 10 the the DT cord-287647-0nyquokt 127 11 terms term NNS cord-287647-0nyquokt 127 12 and and CC cord-287647-0nyquokt 127 13 conditions condition NNS cord-287647-0nyquokt 127 14 of of IN cord-287647-0nyquokt 127 15 the the DT cord-287647-0nyquokt 127 16 Creative Creative NNP cord-287647-0nyquokt 127 17 Commons Commons NNP cord-287647-0nyquokt 127 18 Attribution Attribution NNP cord-287647-0nyquokt 127 19 ( ( -LRB- cord-287647-0nyquokt 127 20 CC CC NNP cord-287647-0nyquokt 127 21 BY by IN cord-287647-0nyquokt 127 22 ) ) -RRB- cord-287647-0nyquokt 127 23 license license NN cord-287647-0nyquokt 127 24 The the DT cord-287647-0nyquokt 127 25 authors author NNS cord-287647-0nyquokt 127 26 are be VBP cord-287647-0nyquokt 127 27 grateful grateful JJ cord-287647-0nyquokt 127 28 to to IN cord-287647-0nyquokt 127 29 the the DT cord-287647-0nyquokt 127 30 horse horse NN cord-287647-0nyquokt 127 31 owners owner NNS cord-287647-0nyquokt 127 32 and and CC cord-287647-0nyquokt 127 33 their -PRON- PRP$ cord-287647-0nyquokt 127 34 veterinary veterinary JJ cord-287647-0nyquokt 127 35 surgeons surgeon NNS cord-287647-0nyquokt 127 36 for for IN cord-287647-0nyquokt 127 37 their -PRON- PRP$ cord-287647-0nyquokt 127 38 support support NN cord-287647-0nyquokt 127 39 and and CC cord-287647-0nyquokt 127 40 discussions discussion NNS cord-287647-0nyquokt 127 41 relating relate VBG cord-287647-0nyquokt 127 42 to to IN cord-287647-0nyquokt 127 43 the the DT cord-287647-0nyquokt 127 44 positive positive JJ cord-287647-0nyquokt 127 45 cases case NNS cord-287647-0nyquokt 127 46 and and CC cord-287647-0nyquokt 127 47 also also RB cord-287647-0nyquokt 127 48 to to IN cord-287647-0nyquokt 127 49 Dr Dr NNP cord-287647-0nyquokt 127 50 Marie Marie NNP cord-287647-0nyquokt 127 51 Garvey Garvey NNP cord-287647-0nyquokt 127 52 for for IN cord-287647-0nyquokt 127 53 assistance assistance NN cord-287647-0nyquokt 127 54 with with IN cord-287647-0nyquokt 127 55 manuscript manuscript NN cord-287647-0nyquokt 127 56 preparation preparation NN cord-287647-0nyquokt 127 57 . . . cord-287647-0nyquokt 128 1 The the DT cord-287647-0nyquokt 128 2 authors author NNS cord-287647-0nyquokt 128 3 declare declare VBP cord-287647-0nyquokt 128 4 no no DT cord-287647-0nyquokt 128 5 conflict conflict NN cord-287647-0nyquokt 128 6 of of IN cord-287647-0nyquokt 128 7 interest interest NN cord-287647-0nyquokt 128 8 . . .