id	author	title	date	pages	extension	mime	words	sentences	flesch	summary	cache	txt
cord-354465-5nqrrnqr	Haslinger, Christian	RNA structures with pseudo-knots: Graph-theoretical, combinatorial, and statistical properties	1999		.txt	text/plain	10341	756	67	Numerical studies based on kinetic folding and a simple extension of the standard energy model show that the global features of the sequence-structure map of RNA do not change when pseudo-knots are introduced into the secondary structure picture. Numerical studies based on kinetic folding and a simple extension of the standard energy model show that the global features of the sequence-structure map of RNA do not change when pseudo-knots are introduced into the secondary structure picture. In case of one particular class of biopolymers, the ribonucleic acid (RNA) molecules, decoding of information stored in the sequence can be properly decomposed into two steps: (i) formation of the secondary structure, that is, of the pattern of Watson-Crick (and GU) base pairs, and (ii) the embedding of the contact structure in three-dimensional space. On the other hand, an increasing number of experimental findings, as well as results from comparative sequence analysis, suggest that pseudo-knots are important structural elements in many RNA molecules (Westhof and Jaeger, 1992) .	./cache/cord-354465-5nqrrnqr.txt	./txt/cord-354465-5nqrrnqr.txt