id	author	title	date	pages	extension	mime	words	sentences	flesch	summary	cache	txt
cord-264135-s2u76pvk	Patel, Amrutlal K.	Complete genome sequence analysis of chicken astrovirus isolate from India	2016-12-23		.txt	text/plain	3755	217	49	Phylogenetic analysis of the astrovirus genomes suggested formation of separate cluster of chicken astroviruses and placed CAstV/INDIA/ANAND/2016 nearest to the CAstV/4175 isolate (Fig. 2) . B-cell epitope analysis of capsid structural protein of identified chicken astrovirus isolate A total of 9-10 epitopes were predicted using SVMTriP using the capsid protein sequence of the astroviruses. Phylogenetic analysis of the genome sequences as well as the protein sequences showed clustering of the CAstV/ INDIA/ANAND/2016 nearest to that of CastV/4175 and CAstV/GA2011 and all four chicken astrovirus formed separate cluster except capsid protein of the CAstV/Poland/G059/ 2014 isolate which was clustered along with the duck astroviruses. The analysis of capsid protein sequence of reported chicken astroviruses from India revealed limited structural divergence suggesting their common ancestral origin and recent emergence. Fig. 4 Phylogenetic relatedness of chicken astrovirus isolate CAstV/India/Anand/2016 ORF2 coding sequences (a) and ORF2 encoded capsid protein (b) with reported Indian isolates based on neighbour-joining method with	./cache/cord-264135-s2u76pvk.txt	./txt/cord-264135-s2u76pvk.txt