id author title date pages extension mime words sentences flesch summary cache txt cord-320729-imyfo83x Spiga, Ottavia Molecular modelling of S1 and S2 subunits of SARS coronavirus spike glycoprotein 2003-10-10 .txt text/plain 2919 122 50 The S1 and S2 subunits of the spike glycoprotein of the coronavirus which is responsible for the severe acute respiratory syndrome (SARS) have been modelled, even though the corresponding amino acid sequences were not suitable for tertiary structure predictions with conventional homology and/or threading procedures. After sequence alignment of SARS S protein (SwissProt Accession Number P59594) with the corresponding ones from human and canine coronaviruses, model building of S1 and S2 subunits was obtained by using the latter two pdb files and shuffled PsiPred runs [13] , with subsequent manual optimisation to enhance the overlapping between the predicted and observed secondary structure elements. As a final remark, it should be underlined that the consistent series of structural features, exhibited by the proposed models for the S1 and S2 subunits of the SARS_CoV spike protein, supports their reliability as a possible rational starting point for anti-viral drug design. ./cache/cord-320729-imyfo83x.txt ./txt/cord-320729-imyfo83x.txt