id	sid	tid	token	lemma	pos
cord-001207-yjaiybwf	1	1	key	key	JJ
cord-001207-yjaiybwf	1	2	:	:	:
cord-001207-yjaiybwf	1	3	cord-001207-yjaiybwf	cord-001207-yjaiybwf	NFP
cord-001207-yjaiybwf	2	1	authors	author	NNS
cord-001207-yjaiybwf	2	2	:	:	:
cord-001207-yjaiybwf	2	3	Sachsenröder	Sachsenröder	NNP
cord-001207-yjaiybwf	2	4	,	,	,
cord-001207-yjaiybwf	2	5	Jana	Jana	NNP
cord-001207-yjaiybwf	2	6	;	;	:
cord-001207-yjaiybwf	2	7	Twardziok	Twardziok	NNP
cord-001207-yjaiybwf	2	8	,	,	,
cord-001207-yjaiybwf	2	9	Sven	Sven	NNP
cord-001207-yjaiybwf	2	10	O.	O.	NNP
cord-001207-yjaiybwf	2	11	;	;	:
cord-001207-yjaiybwf	2	12	Scheuch	Scheuch	NNP
cord-001207-yjaiybwf	2	13	,	,	,
cord-001207-yjaiybwf	2	14	Matthias	Matthias	NNP
cord-001207-yjaiybwf	2	15	;	;	:
cord-001207-yjaiybwf	2	16	Johne	Johne	NNP
cord-001207-yjaiybwf	2	17	,	,	,
cord-001207-yjaiybwf	2	18	Reimar	Reimar	NNP
cord-001207-yjaiybwf	2	19	title	title	NN
cord-001207-yjaiybwf	2	20	:	:	:
cord-001207-yjaiybwf	3	1	The	the	DT
cord-001207-yjaiybwf	3	2	General	General	NNP
cord-001207-yjaiybwf	3	3	Composition	Composition	NNP
cord-001207-yjaiybwf	3	4	of	of	IN
cord-001207-yjaiybwf	3	5	the	the	DT
cord-001207-yjaiybwf	3	6	Faecal	Faecal	NNP
cord-001207-yjaiybwf	3	7	Virome	Virome	NNP
cord-001207-yjaiybwf	3	8	of	of	IN
cord-001207-yjaiybwf	3	9	Pigs	Pigs	NNPS
cord-001207-yjaiybwf	3	10	Depends	depend	VBZ
cord-001207-yjaiybwf	3	11	on	on	IN
cord-001207-yjaiybwf	3	12	Age	Age	NNP
cord-001207-yjaiybwf	3	13	,	,	,
cord-001207-yjaiybwf	3	14	but	but	CC
cord-001207-yjaiybwf	3	15	Not	not	RB
cord-001207-yjaiybwf	3	16	on	on	IN
cord-001207-yjaiybwf	3	17	Feeding	feed	VBG
cord-001207-yjaiybwf	3	18	with	with	IN
cord-001207-yjaiybwf	3	19	a	a	DT
cord-001207-yjaiybwf	3	20	Probiotic	probiotic	JJ
cord-001207-yjaiybwf	3	21	Bacterium	bacterium	NN
cord-001207-yjaiybwf	3	22	date	date	NN
cord-001207-yjaiybwf	4	1	:	:	:
cord-001207-yjaiybwf	4	2	2014	2014	CD
cord-001207-yjaiybwf	4	3	-	-	HYPH
cord-001207-yjaiybwf	4	4	02	02	CD
cord-001207-yjaiybwf	4	5	-	-	SYM
cord-001207-yjaiybwf	4	6	19	19	CD
cord-001207-yjaiybwf	4	7	journal	journal	NN
cord-001207-yjaiybwf	4	8	:	:	:
cord-001207-yjaiybwf	5	1	PLoS	PLoS	NNP
cord-001207-yjaiybwf	5	2	One	one	CD
cord-001207-yjaiybwf	5	3	DOI	DOI	NNP
cord-001207-yjaiybwf	5	4	:	:	:
cord-001207-yjaiybwf	5	5	10.1371	10.1371	CD
cord-001207-yjaiybwf	5	6	/	/	SYM
cord-001207-yjaiybwf	5	7	journal.pone.0088888	journal.pone.0088888	NN
cord-001207-yjaiybwf	5	8	sha	sha	NNP
cord-001207-yjaiybwf	5	9	:	:	:
cord-001207-yjaiybwf	5	10	ade1a8f088544b34547d3f9608805c969c9f189f	ade1a8f088544b34547d3f9608805c969c9f189f	NNP
cord-001207-yjaiybwf	5	11	doc_id	doc_id	CD
cord-001207-yjaiybwf	5	12	:	:	:
cord-001207-yjaiybwf	5	13	1207	1207	CD
cord-001207-yjaiybwf	5	14	cord_uid	cord_uid	NN
cord-001207-yjaiybwf	5	15	:	:	:
cord-001207-yjaiybwf	6	1	yjaiybwf	yjaiybwf	NNP
cord-001207-yjaiybwf	6	2	BACKGROUND	BACKGROUND	NNP
cord-001207-yjaiybwf	6	3	:	:	:
cord-001207-yjaiybwf	7	1	The	the	DT
cord-001207-yjaiybwf	7	2	pig	pig	NN
cord-001207-yjaiybwf	7	3	faecal	faecal	JJ
cord-001207-yjaiybwf	7	4	virome	virome	NNP
cord-001207-yjaiybwf	7	5	,	,	,
cord-001207-yjaiybwf	7	6	which	which	WDT
cord-001207-yjaiybwf	7	7	comprises	comprise	VBZ
cord-001207-yjaiybwf	7	8	the	the	DT
cord-001207-yjaiybwf	7	9	community	community	NN
cord-001207-yjaiybwf	7	10	of	of	IN
cord-001207-yjaiybwf	7	11	viruses	virus	NNS
cord-001207-yjaiybwf	7	12	present	present	JJ
cord-001207-yjaiybwf	7	13	in	in	IN
cord-001207-yjaiybwf	7	14	pig	pig	NN
cord-001207-yjaiybwf	7	15	faeces	faece	NNS
cord-001207-yjaiybwf	7	16	,	,	,
cord-001207-yjaiybwf	7	17	is	be	VBZ
cord-001207-yjaiybwf	7	18	complex	complex	JJ
cord-001207-yjaiybwf	7	19	and	and	CC
cord-001207-yjaiybwf	7	20	consists	consist	VBZ
cord-001207-yjaiybwf	7	21	of	of	IN
cord-001207-yjaiybwf	7	22	pig	pig	NN
cord-001207-yjaiybwf	7	23	viruses	virus	NNS
cord-001207-yjaiybwf	7	24	,	,	,
cord-001207-yjaiybwf	7	25	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	7	26	,	,	,
cord-001207-yjaiybwf	7	27	transiently	transiently	RB
cord-001207-yjaiybwf	7	28	passaged	passage	VBD
cord-001207-yjaiybwf	7	29	plant	plant	NN
cord-001207-yjaiybwf	7	30	viruses	virus	NNS
cord-001207-yjaiybwf	7	31	and	and	CC
cord-001207-yjaiybwf	7	32	other	other	JJ
cord-001207-yjaiybwf	7	33	minor	minor	JJ
cord-001207-yjaiybwf	7	34	virus	virus	NN
cord-001207-yjaiybwf	7	35	species	specie	NNS
cord-001207-yjaiybwf	7	36	.	.	.
cord-001207-yjaiybwf	8	1	Only	only	RB
cord-001207-yjaiybwf	8	2	little	little	JJ
cord-001207-yjaiybwf	8	3	is	be	VBZ
cord-001207-yjaiybwf	8	4	known	know	VBN
cord-001207-yjaiybwf	8	5	about	about	IN
cord-001207-yjaiybwf	8	6	factors	factor	NNS
cord-001207-yjaiybwf	8	7	influencing	influence	VBG
cord-001207-yjaiybwf	8	8	its	-PRON-	PRP$
cord-001207-yjaiybwf	8	9	general	general	JJ
cord-001207-yjaiybwf	8	10	composition	composition	NN
cord-001207-yjaiybwf	8	11	.	.	.
cord-001207-yjaiybwf	9	1	Here	here	RB
cord-001207-yjaiybwf	9	2	,	,	,
cord-001207-yjaiybwf	9	3	the	the	DT
cord-001207-yjaiybwf	9	4	effect	effect	NN
cord-001207-yjaiybwf	9	5	of	of	IN
cord-001207-yjaiybwf	9	6	the	the	DT
cord-001207-yjaiybwf	9	7	probiotic	probiotic	JJ
cord-001207-yjaiybwf	9	8	bacterium	bacterium	NN
cord-001207-yjaiybwf	9	9	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	9	10	faecium	faecium	NN
cord-001207-yjaiybwf	9	11	(	(	-LRB-
cord-001207-yjaiybwf	9	12	E.	E.	NNP
cord-001207-yjaiybwf	9	13	faecium	faecium	NNP
cord-001207-yjaiybwf	9	14	)	)	-RRB-
cord-001207-yjaiybwf	9	15	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	9	16	10415	10415	CD
cord-001207-yjaiybwf	9	17	on	on	IN
cord-001207-yjaiybwf	9	18	the	the	DT
cord-001207-yjaiybwf	9	19	pig	pig	NN
cord-001207-yjaiybwf	9	20	faecal	faecal	JJ
cord-001207-yjaiybwf	9	21	virome	virome	NNP
cord-001207-yjaiybwf	9	22	composition	composition	NN
cord-001207-yjaiybwf	9	23	was	be	VBD
cord-001207-yjaiybwf	9	24	analysed	analyse	VBN
cord-001207-yjaiybwf	9	25	in	in	IN
cord-001207-yjaiybwf	9	26	a	a	DT
cord-001207-yjaiybwf	9	27	pig	pig	NN
cord-001207-yjaiybwf	9	28	feeding	feed	VBG
cord-001207-yjaiybwf	9	29	trial	trial	NN
cord-001207-yjaiybwf	9	30	with	with	IN
cord-001207-yjaiybwf	9	31	sows	sow	NNS
cord-001207-yjaiybwf	9	32	and	and	CC
cord-001207-yjaiybwf	9	33	their	-PRON-	PRP$
cord-001207-yjaiybwf	9	34	piglets	piglet	NNS
cord-001207-yjaiybwf	9	35	,	,	,
cord-001207-yjaiybwf	9	36	which	which	WDT
cord-001207-yjaiybwf	9	37	received	receive	VBD
cord-001207-yjaiybwf	9	38	either	either	CC
cord-001207-yjaiybwf	9	39	the	the	DT
cord-001207-yjaiybwf	9	40	probiotic	probiotic	JJ
cord-001207-yjaiybwf	9	41	bacterium	bacterium	NN
cord-001207-yjaiybwf	9	42	or	or	CC
cord-001207-yjaiybwf	9	43	not	not	RB
cord-001207-yjaiybwf	9	44	.	.	.
cord-001207-yjaiybwf	10	1	RESULTS	result	NNS
cord-001207-yjaiybwf	10	2	:	:	:
cord-001207-yjaiybwf	11	1	From	from	IN
cord-001207-yjaiybwf	11	2	8	8	CD
cord-001207-yjaiybwf	11	3	pooled	pooled	JJ
cord-001207-yjaiybwf	11	4	faecal	faecal	JJ
cord-001207-yjaiybwf	11	5	samples	sample	NNS
cord-001207-yjaiybwf	11	6	derived	derive	VBN
cord-001207-yjaiybwf	11	7	from	from	IN
cord-001207-yjaiybwf	11	8	the	the	DT
cord-001207-yjaiybwf	11	9	feeding	feeding	NN
cord-001207-yjaiybwf	11	10	trial	trial	NN
cord-001207-yjaiybwf	11	11	,	,	,
cord-001207-yjaiybwf	11	12	DNA	DNA	NNP
cord-001207-yjaiybwf	11	13	and	and	CC
cord-001207-yjaiybwf	11	14	RNA	RNA	NNP
cord-001207-yjaiybwf	11	15	virus	virus	NN
cord-001207-yjaiybwf	11	16	particles	particle	NNS
cord-001207-yjaiybwf	11	17	were	be	VBD
cord-001207-yjaiybwf	11	18	prepared	prepare	VBN
cord-001207-yjaiybwf	11	19	and	and	CC
cord-001207-yjaiybwf	11	20	subjected	subject	VBN
cord-001207-yjaiybwf	11	21	to	to	IN
cord-001207-yjaiybwf	11	22	process	process	NN
cord-001207-yjaiybwf	11	23	-	-	HYPH
cord-001207-yjaiybwf	11	24	controlled	control	VBN
cord-001207-yjaiybwf	11	25	Next	Next	NNP
cord-001207-yjaiybwf	11	26	Generation	Generation	NNP
cord-001207-yjaiybwf	11	27	Sequencing	Sequencing	NNP
cord-001207-yjaiybwf	11	28	resulting	result	VBG
cord-001207-yjaiybwf	11	29	in	in	IN
cord-001207-yjaiybwf	11	30	390,650	390,650	CD
cord-001207-yjaiybwf	11	31	sequence	sequence	NN
cord-001207-yjaiybwf	11	32	reads	read	VBZ
cord-001207-yjaiybwf	11	33	.	.	.
cord-001207-yjaiybwf	12	1	In	in	IN
cord-001207-yjaiybwf	12	2	average	average	JJ
cord-001207-yjaiybwf	12	3	,	,	,
cord-001207-yjaiybwf	12	4	14	14	CD
cord-001207-yjaiybwf	12	5	%	%	NN
cord-001207-yjaiybwf	12	6	of	of	IN
cord-001207-yjaiybwf	12	7	the	the	DT
cord-001207-yjaiybwf	12	8	reads	read	NNS
cord-001207-yjaiybwf	12	9	showed	show	VBD
cord-001207-yjaiybwf	12	10	significant	significant	JJ
cord-001207-yjaiybwf	12	11	sequence	sequence	NN
cord-001207-yjaiybwf	12	12	identities	identity	NNS
cord-001207-yjaiybwf	12	13	to	to	IN
cord-001207-yjaiybwf	12	14	known	know	VBN
cord-001207-yjaiybwf	12	15	viruses	virus	NNS
cord-001207-yjaiybwf	12	16	.	.	.
cord-001207-yjaiybwf	13	1	The	the	DT
cord-001207-yjaiybwf	13	2	percentage	percentage	NN
cord-001207-yjaiybwf	13	3	of	of	IN
cord-001207-yjaiybwf	13	4	detected	detect	VBN
cord-001207-yjaiybwf	13	5	mammalian	mammalian	JJ
cord-001207-yjaiybwf	13	6	virus	virus	NN
cord-001207-yjaiybwf	13	7	sequences	sequence	NNS
cord-001207-yjaiybwf	13	8	was	be	VBD
cord-001207-yjaiybwf	13	9	highest	high	JJS
cord-001207-yjaiybwf	13	10	(	(	-LRB-
cord-001207-yjaiybwf	13	11	55–77	55–77	CD
cord-001207-yjaiybwf	13	12	%	%	NN
cord-001207-yjaiybwf	13	13	)	)	-RRB-
cord-001207-yjaiybwf	13	14	in	in	IN
cord-001207-yjaiybwf	13	15	the	the	DT
cord-001207-yjaiybwf	13	16	samples	sample	NNS
cord-001207-yjaiybwf	13	17	of	of	IN
cord-001207-yjaiybwf	13	18	the	the	DT
cord-001207-yjaiybwf	13	19	youngest	young	JJS
cord-001207-yjaiybwf	13	20	piglets	piglet	NNS
cord-001207-yjaiybwf	13	21	and	and	CC
cord-001207-yjaiybwf	13	22	lowest	low	JJS
cord-001207-yjaiybwf	13	23	(	(	-LRB-
cord-001207-yjaiybwf	13	24	8–10	8–10	CD
cord-001207-yjaiybwf	13	25	%	%	NN
cord-001207-yjaiybwf	13	26	)	)	-RRB-
cord-001207-yjaiybwf	13	27	in	in	IN
cord-001207-yjaiybwf	13	28	the	the	DT
cord-001207-yjaiybwf	13	29	samples	sample	NNS
cord-001207-yjaiybwf	13	30	of	of	IN
cord-001207-yjaiybwf	13	31	the	the	DT
cord-001207-yjaiybwf	13	32	sows	sow	NNS
cord-001207-yjaiybwf	13	33	.	.	.
cord-001207-yjaiybwf	14	1	In	in	IN
cord-001207-yjaiybwf	14	2	contrast	contrast	NN
cord-001207-yjaiybwf	14	3	,	,	,
cord-001207-yjaiybwf	14	4	the	the	DT
cord-001207-yjaiybwf	14	5	percentage	percentage	NN
cord-001207-yjaiybwf	14	6	of	of	IN
cord-001207-yjaiybwf	14	7	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	14	8	sequences	sequence	NNS
cord-001207-yjaiybwf	14	9	increased	increase	VBD
cord-001207-yjaiybwf	14	10	from	from	IN
cord-001207-yjaiybwf	14	11	22–44	22–44	CD
cord-001207-yjaiybwf	14	12	%	%	NN
cord-001207-yjaiybwf	14	13	in	in	IN
cord-001207-yjaiybwf	14	14	the	the	DT
cord-001207-yjaiybwf	14	15	youngest	young	JJS
cord-001207-yjaiybwf	14	16	piglets	piglet	NNS
cord-001207-yjaiybwf	14	17	to	to	IN
cord-001207-yjaiybwf	14	18	approximately	approximately	RB
cord-001207-yjaiybwf	14	19	90	90	CD
cord-001207-yjaiybwf	14	20	%	%	NN
cord-001207-yjaiybwf	14	21	in	in	IN
cord-001207-yjaiybwf	14	22	the	the	DT
cord-001207-yjaiybwf	14	23	sows	sow	NNS
cord-001207-yjaiybwf	14	24	.	.	.
cord-001207-yjaiybwf	15	1	The	the	DT
cord-001207-yjaiybwf	15	2	dominating	dominating	JJ
cord-001207-yjaiybwf	15	3	mammalian	mammalian	JJ
cord-001207-yjaiybwf	15	4	viruses	virus	NNS
cord-001207-yjaiybwf	15	5	differed	differ	VBD
cord-001207-yjaiybwf	15	6	remarkably	remarkably	RB
cord-001207-yjaiybwf	15	7	among	among	IN
cord-001207-yjaiybwf	15	8	12	12	CD
cord-001207-yjaiybwf	15	9	day	day	NN
cord-001207-yjaiybwf	15	10	-	-	HYPH
cord-001207-yjaiybwf	15	11	old	old	JJ
cord-001207-yjaiybwf	15	12	piglets	piglet	NNS
cord-001207-yjaiybwf	15	13	(	(	-LRB-
cord-001207-yjaiybwf	15	14	kobuvirus	kobuvirus	NNP
cord-001207-yjaiybwf	15	15	)	)	-RRB-
cord-001207-yjaiybwf	15	16	,	,	,
cord-001207-yjaiybwf	15	17	54	54	CD
cord-001207-yjaiybwf	15	18	day	day	NN
cord-001207-yjaiybwf	15	19	-	-	HYPH
cord-001207-yjaiybwf	15	20	old	old	JJ
cord-001207-yjaiybwf	15	21	piglets	piglet	NNS
cord-001207-yjaiybwf	15	22	(	(	-LRB-
cord-001207-yjaiybwf	15	23	boca-	boca-	NNP
cord-001207-yjaiybwf	15	24	,	,	,
cord-001207-yjaiybwf	15	25	dependo-	dependo-	NN
cord-001207-yjaiybwf	15	26	and	and	CC
cord-001207-yjaiybwf	15	27	pig	pig	NN
cord-001207-yjaiybwf	15	28	stool	stool	NN
cord-001207-yjaiybwf	15	29	-	-	HYPH
cord-001207-yjaiybwf	15	30	associated	associate	VBN
cord-001207-yjaiybwf	15	31	small	small	JJ
cord-001207-yjaiybwf	15	32	circular	circular	JJ
cord-001207-yjaiybwf	15	33	DNA	dna	NN
cord-001207-yjaiybwf	15	34	virus	virus	NN
cord-001207-yjaiybwf	15	35	[	[	-LRB-
cord-001207-yjaiybwf	15	36	PigSCV	PigSCV	NNP
cord-001207-yjaiybwf	15	37	]	]	-RRB-
cord-001207-yjaiybwf	15	38	)	)	-RRB-
cord-001207-yjaiybwf	15	39	and	and	CC
cord-001207-yjaiybwf	15	40	the	the	DT
cord-001207-yjaiybwf	15	41	sows	sow	NNS
cord-001207-yjaiybwf	15	42	(	(	-LRB-
cord-001207-yjaiybwf	15	43	PigSCV	PigSCV	NNP
cord-001207-yjaiybwf	15	44	,	,	,
cord-001207-yjaiybwf	15	45	circovirus	circovirus	NNP
cord-001207-yjaiybwf	15	46	and	and	CC
cord-001207-yjaiybwf	15	47	“	"	``
cord-001207-yjaiybwf	15	48	circovirus	circovirus	NNP
cord-001207-yjaiybwf	15	49	-	-	HYPH
cord-001207-yjaiybwf	15	50	like	like	JJ
cord-001207-yjaiybwf	15	51	”	"	''
cord-001207-yjaiybwf	15	52	viruses	virus	NNS
cord-001207-yjaiybwf	15	53	CB	CB	NNP
cord-001207-yjaiybwf	16	1	-A	-A	:
cord-001207-yjaiybwf	16	2	and	and	CC
cord-001207-yjaiybwf	16	3	RW	RW	NNP
cord-001207-yjaiybwf	16	4	-	-	HYPH
cord-001207-yjaiybwf	16	5	A	a	NN
cord-001207-yjaiybwf	16	6	)	)	-RRB-
cord-001207-yjaiybwf	16	7	.	.	.
cord-001207-yjaiybwf	17	1	In	in	IN
cord-001207-yjaiybwf	17	2	addition	addition	NN
cord-001207-yjaiybwf	17	3	,	,	,
cord-001207-yjaiybwf	17	4	the	the	DT
cord-001207-yjaiybwf	17	5	Shannon	Shannon	NNP
cord-001207-yjaiybwf	17	6	index	index	NN
cord-001207-yjaiybwf	17	7	,	,	,
cord-001207-yjaiybwf	17	8	which	which	WDT
cord-001207-yjaiybwf	17	9	reflects	reflect	VBZ
cord-001207-yjaiybwf	17	10	the	the	DT
cord-001207-yjaiybwf	17	11	diversity	diversity	NN
cord-001207-yjaiybwf	17	12	of	of	IN
cord-001207-yjaiybwf	17	13	sequences	sequence	NNS
cord-001207-yjaiybwf	17	14	present	present	JJ
cord-001207-yjaiybwf	17	15	in	in	IN
cord-001207-yjaiybwf	17	16	a	a	DT
cord-001207-yjaiybwf	17	17	sample	sample	NN
cord-001207-yjaiybwf	17	18	,	,	,
cord-001207-yjaiybwf	17	19	was	be	VBD
cord-001207-yjaiybwf	17	20	generally	generally	RB
cord-001207-yjaiybwf	17	21	higher	high	JJR
cord-001207-yjaiybwf	17	22	for	for	IN
cord-001207-yjaiybwf	17	23	the	the	DT
cord-001207-yjaiybwf	17	24	sows	sow	NNS
cord-001207-yjaiybwf	17	25	as	as	IN
cord-001207-yjaiybwf	17	26	compared	compare	VBN
cord-001207-yjaiybwf	17	27	to	to	IN
cord-001207-yjaiybwf	17	28	the	the	DT
cord-001207-yjaiybwf	17	29	piglets	piglet	NNS
cord-001207-yjaiybwf	17	30	.	.	.
cord-001207-yjaiybwf	18	1	No	no	DT
cord-001207-yjaiybwf	18	2	consistent	consistent	JJ
cord-001207-yjaiybwf	18	3	differences	difference	NNS
cord-001207-yjaiybwf	18	4	in	in	IN
cord-001207-yjaiybwf	18	5	the	the	DT
cord-001207-yjaiybwf	18	6	virome	virome	JJ
cord-001207-yjaiybwf	18	7	composition	composition	NN
cord-001207-yjaiybwf	18	8	could	could	MD
cord-001207-yjaiybwf	18	9	be	be	VB
cord-001207-yjaiybwf	18	10	identified	identify	VBN
cord-001207-yjaiybwf	18	11	between	between	IN
cord-001207-yjaiybwf	18	12	the	the	DT
cord-001207-yjaiybwf	18	13	viromes	virome	NNS
cord-001207-yjaiybwf	18	14	of	of	IN
cord-001207-yjaiybwf	18	15	the	the	DT
cord-001207-yjaiybwf	18	16	probiotic	probiotic	JJ
cord-001207-yjaiybwf	18	17	bacterium	bacterium	NN
cord-001207-yjaiybwf	18	18	-	-	HYPH
cord-001207-yjaiybwf	18	19	treated	treat	VBN
cord-001207-yjaiybwf	18	20	group	group	NN
cord-001207-yjaiybwf	18	21	and	and	CC
cord-001207-yjaiybwf	18	22	the	the	DT
cord-001207-yjaiybwf	18	23	control	control	NN
cord-001207-yjaiybwf	18	24	group	group	NN
cord-001207-yjaiybwf	18	25	.	.	.
cord-001207-yjaiybwf	19	1	CONCLUSION	conclusion	NN
cord-001207-yjaiybwf	19	2	:	:	:
cord-001207-yjaiybwf	20	1	The	the	DT
cord-001207-yjaiybwf	20	2	analysis	analysis	NN
cord-001207-yjaiybwf	20	3	indicates	indicate	VBZ
cord-001207-yjaiybwf	20	4	that	that	IN
cord-001207-yjaiybwf	20	5	the	the	DT
cord-001207-yjaiybwf	20	6	pig	pig	NN
cord-001207-yjaiybwf	20	7	faecal	faecal	JJ
cord-001207-yjaiybwf	20	8	virome	virome	NNP
cord-001207-yjaiybwf	20	9	shows	show	VBZ
cord-001207-yjaiybwf	20	10	a	a	DT
cord-001207-yjaiybwf	20	11	high	high	JJ
cord-001207-yjaiybwf	20	12	variability	variability	NN
cord-001207-yjaiybwf	20	13	and	and	CC
cord-001207-yjaiybwf	20	14	that	that	IN
cord-001207-yjaiybwf	20	15	its	-PRON-	PRP$
cord-001207-yjaiybwf	20	16	general	general	JJ
cord-001207-yjaiybwf	20	17	composition	composition	NN
cord-001207-yjaiybwf	20	18	is	be	VBZ
cord-001207-yjaiybwf	20	19	mainly	mainly	RB
cord-001207-yjaiybwf	20	20	dependent	dependent	JJ
cord-001207-yjaiybwf	20	21	on	on	IN
cord-001207-yjaiybwf	20	22	the	the	DT
cord-001207-yjaiybwf	20	23	age	age	NN
cord-001207-yjaiybwf	20	24	of	of	IN
cord-001207-yjaiybwf	20	25	the	the	DT
cord-001207-yjaiybwf	20	26	pigs	pig	NNS
cord-001207-yjaiybwf	20	27	.	.	.
cord-001207-yjaiybwf	21	1	Changes	change	NNS
cord-001207-yjaiybwf	21	2	caused	cause	VBN
cord-001207-yjaiybwf	21	3	by	by	IN
cord-001207-yjaiybwf	21	4	feeding	feed	VBG
cord-001207-yjaiybwf	21	5	with	with	IN
cord-001207-yjaiybwf	21	6	the	the	DT
cord-001207-yjaiybwf	21	7	probiotic	probiotic	JJ
cord-001207-yjaiybwf	21	8	bacterium	bacterium	NN
cord-001207-yjaiybwf	21	9	E.	E.	NNP
cord-001207-yjaiybwf	21	10	faecium	faecium	NN
cord-001207-yjaiybwf	21	11	could	could	MD
cord-001207-yjaiybwf	21	12	not	not	RB
cord-001207-yjaiybwf	21	13	be	be	VB
cord-001207-yjaiybwf	21	14	demonstrated	demonstrate	VBN
cord-001207-yjaiybwf	21	15	using	use	VBG
cord-001207-yjaiybwf	21	16	the	the	DT
cord-001207-yjaiybwf	21	17	applied	apply	VBN
cord-001207-yjaiybwf	21	18	metagenomics	metagenomics	NN
cord-001207-yjaiybwf	21	19	method	method	NN
cord-001207-yjaiybwf	21	20	.	.	.
cord-001207-yjaiybwf	22	1	The	the	DT
cord-001207-yjaiybwf	22	2	viral	viral	JJ
cord-001207-yjaiybwf	22	3	community	community	NN
cord-001207-yjaiybwf	22	4	present	present	JJ
cord-001207-yjaiybwf	22	5	in	in	IN
cord-001207-yjaiybwf	22	6	faeces	faece	NNS
cord-001207-yjaiybwf	22	7	is	be	VBZ
cord-001207-yjaiybwf	22	8	composed	compose	VBN
cord-001207-yjaiybwf	22	9	of	of	IN
cord-001207-yjaiybwf	22	10	a	a	DT
cord-001207-yjaiybwf	22	11	variety	variety	NN
cord-001207-yjaiybwf	22	12	of	of	IN
cord-001207-yjaiybwf	22	13	viruses	virus	NNS
cord-001207-yjaiybwf	22	14	originating	originate	VBG
cord-001207-yjaiybwf	22	15	from	from	IN
cord-001207-yjaiybwf	22	16	the	the	DT
cord-001207-yjaiybwf	22	17	gut	gut	NN
cord-001207-yjaiybwf	22	18	tissue	tissue	NN
cord-001207-yjaiybwf	22	19	,	,	,
cord-001207-yjaiybwf	22	20	from	from	IN
cord-001207-yjaiybwf	22	21	intestinal	intestinal	JJ
cord-001207-yjaiybwf	22	22	microorganisms	microorganism	NNS
cord-001207-yjaiybwf	22	23	or	or	CC
cord-001207-yjaiybwf	22	24	from	from	IN
cord-001207-yjaiybwf	22	25	ingested	ingest	VBN
cord-001207-yjaiybwf	22	26	food	food	NN
cord-001207-yjaiybwf	22	27	.	.	.
cord-001207-yjaiybwf	23	1	The	the	DT
cord-001207-yjaiybwf	23	2	totality	totality	NN
cord-001207-yjaiybwf	23	3	of	of	IN
cord-001207-yjaiybwf	23	4	viruses	virus	NNS
cord-001207-yjaiybwf	23	5	present	present	JJ
cord-001207-yjaiybwf	23	6	in	in	IN
cord-001207-yjaiybwf	23	7	faeces	faece	NNS
cord-001207-yjaiybwf	23	8	has	have	VBZ
cord-001207-yjaiybwf	23	9	also	also	RB
cord-001207-yjaiybwf	23	10	been	be	VBN
cord-001207-yjaiybwf	23	11	frequently	frequently	RB
cord-001207-yjaiybwf	23	12	designated	designate	VBN
cord-001207-yjaiybwf	23	13	as	as	IN
cord-001207-yjaiybwf	23	14	the	the	DT
cord-001207-yjaiybwf	23	15	faecal	faecal	JJ
cord-001207-yjaiybwf	23	16	virome	virome	NN
cord-001207-yjaiybwf	23	17	[	[	-LRB-
cord-001207-yjaiybwf	23	18	1	1	CD
cord-001207-yjaiybwf	23	19	,	,	,
cord-001207-yjaiybwf	23	20	2	2	CD
cord-001207-yjaiybwf	23	21	]	]	-RRB-
cord-001207-yjaiybwf	23	22	.	.	.
cord-001207-yjaiybwf	24	1	The	the	DT
cord-001207-yjaiybwf	24	2	functions	function	NNS
cord-001207-yjaiybwf	24	3	of	of	IN
cord-001207-yjaiybwf	24	4	the	the	DT
cord-001207-yjaiybwf	24	5	faecal	faecal	JJ
cord-001207-yjaiybwf	24	6	virome	virome	NNP
cord-001207-yjaiybwf	24	7	are	be	VBP
cord-001207-yjaiybwf	24	8	supposed	suppose	VBN
cord-001207-yjaiybwf	24	9	to	to	TO
cord-001207-yjaiybwf	24	10	be	be	VB
cord-001207-yjaiybwf	24	11	manifold	manifold	JJ
cord-001207-yjaiybwf	24	12	,	,	,
cord-001207-yjaiybwf	24	13	which	which	WDT
cord-001207-yjaiybwf	24	14	include	include	VBP
cord-001207-yjaiybwf	24	15	roles	role	NNS
cord-001207-yjaiybwf	24	16	for	for	IN
cord-001207-yjaiybwf	24	17	the	the	DT
cord-001207-yjaiybwf	24	18	viruses	virus	NNS
cord-001207-yjaiybwf	24	19	as	as	IN
cord-001207-yjaiybwf	24	20	pathogens	pathogen	NNS
cord-001207-yjaiybwf	24	21	,	,	,
cord-001207-yjaiybwf	24	22	regulators	regulator	NNS
cord-001207-yjaiybwf	24	23	of	of	IN
cord-001207-yjaiybwf	24	24	bacterial	bacterial	JJ
cord-001207-yjaiybwf	24	25	growth	growth	NN
cord-001207-yjaiybwf	24	26	,	,	,
cord-001207-yjaiybwf	24	27	gene	gene	NN
cord-001207-yjaiybwf	24	28	-	-	HYPH
cord-001207-yjaiybwf	24	29	transfer	transfer	NN
cord-001207-yjaiybwf	24	30	vehicles	vehicle	NNS
cord-001207-yjaiybwf	24	31	and	and	CC
cord-001207-yjaiybwf	24	32	modulators	modulator	NNS
cord-001207-yjaiybwf	24	33	of	of	IN
cord-001207-yjaiybwf	24	34	the	the	DT
cord-001207-yjaiybwf	24	35	immune	immune	JJ
cord-001207-yjaiybwf	24	36	system	system	NN
cord-001207-yjaiybwf	24	37	[	[	-LRB-
cord-001207-yjaiybwf	24	38	3	3	CD
cord-001207-yjaiybwf	24	39	]	]	-RRB-
cord-001207-yjaiybwf	24	40	[	[	-LRB-
cord-001207-yjaiybwf	24	41	4	4	CD
cord-001207-yjaiybwf	24	42	]	]	-RRB-
cord-001207-yjaiybwf	24	43	[	[	-LRB-
cord-001207-yjaiybwf	24	44	5	5	CD
cord-001207-yjaiybwf	24	45	]	]	-RRB-
cord-001207-yjaiybwf	24	46	[	[	-LRB-
cord-001207-yjaiybwf	24	47	6	6	CD
cord-001207-yjaiybwf	24	48	]	]	-RRB-
cord-001207-yjaiybwf	24	49	.	.	.
cord-001207-yjaiybwf	25	1	Early	early	JJ
cord-001207-yjaiybwf	25	2	insights	insight	NNS
cord-001207-yjaiybwf	25	3	into	into	IN
cord-001207-yjaiybwf	25	4	the	the	DT
cord-001207-yjaiybwf	25	5	composition	composition	NN
cord-001207-yjaiybwf	25	6	of	of	IN
cord-001207-yjaiybwf	25	7	the	the	DT
cord-001207-yjaiybwf	25	8	human	human	JJ
cord-001207-yjaiybwf	25	9	faecal	faecal	JJ
cord-001207-yjaiybwf	25	10	virome	virome	NNP
cord-001207-yjaiybwf	25	11	were	be	VBD
cord-001207-yjaiybwf	25	12	provided	provide	VBN
cord-001207-yjaiybwf	25	13	by	by	IN
cord-001207-yjaiybwf	25	14	random	random	JJ
cord-001207-yjaiybwf	25	15	cloning	cloning	NN
cord-001207-yjaiybwf	25	16	strategies	strategy	NNS
cord-001207-yjaiybwf	25	17	[	[	-LRB-
cord-001207-yjaiybwf	25	18	7	7	CD
cord-001207-yjaiybwf	25	19	,	,	,
cord-001207-yjaiybwf	25	20	8	8	CD
cord-001207-yjaiybwf	25	21	]	]	-RRB-
cord-001207-yjaiybwf	25	22	.	.	.
cord-001207-yjaiybwf	26	1	Later	later	RB
cord-001207-yjaiybwf	26	2	on	on	RB
cord-001207-yjaiybwf	26	3	,	,	,
cord-001207-yjaiybwf	26	4	the	the	DT
cord-001207-yjaiybwf	26	5	availability	availability	NN
cord-001207-yjaiybwf	26	6	of	of	IN
cord-001207-yjaiybwf	26	7	deep	deep	JJ
cord-001207-yjaiybwf	26	8	sequencing	sequencing	NN
cord-001207-yjaiybwf	26	9	methods	method	NNS
cord-001207-yjaiybwf	26	10	lead	lead	VBP
cord-001207-yjaiybwf	26	11	to	to	IN
cord-001207-yjaiybwf	26	12	more	more	JJR
cord-001207-yjaiybwf	26	13	comprehensive	comprehensive	JJ
cord-001207-yjaiybwf	26	14	analyses	analysis	NNS
cord-001207-yjaiybwf	26	15	of	of	IN
cord-001207-yjaiybwf	26	16	faecal	faecal	JJ
cord-001207-yjaiybwf	26	17	viromes	virome	NNS
cord-001207-yjaiybwf	26	18	[	[	-LRB-
cord-001207-yjaiybwf	26	19	1	1	CD
cord-001207-yjaiybwf	26	20	,	,	,
cord-001207-yjaiybwf	26	21	9	9	CD
cord-001207-yjaiybwf	26	22	]	]	-RRB-
cord-001207-yjaiybwf	26	23	,	,	,
cord-001207-yjaiybwf	26	24	including	include	VBG
cord-001207-yjaiybwf	26	25	the	the	DT
cord-001207-yjaiybwf	26	26	development	development	NN
cord-001207-yjaiybwf	26	27	of	of	IN
cord-001207-yjaiybwf	26	28	processcontrolled	processcontrolled	JJ
cord-001207-yjaiybwf	26	29	techniques	technique	NNS
cord-001207-yjaiybwf	26	30	enabling	enable	VBG
cord-001207-yjaiybwf	26	31	comparison	comparison	NN
cord-001207-yjaiybwf	26	32	of	of	IN
cord-001207-yjaiybwf	26	33	different	different	JJ
cord-001207-yjaiybwf	26	34	analyses	analysis	NNS
cord-001207-yjaiybwf	26	35	[	[	-LRB-
cord-001207-yjaiybwf	26	36	10	10	CD
cord-001207-yjaiybwf	26	37	]	]	-RRB-
cord-001207-yjaiybwf	26	38	.	.	.
cord-001207-yjaiybwf	27	1	The	the	DT
cord-001207-yjaiybwf	27	2	composition	composition	NN
cord-001207-yjaiybwf	27	3	of	of	IN
cord-001207-yjaiybwf	27	4	the	the	DT
cord-001207-yjaiybwf	27	5	faecal	faecal	JJ
cord-001207-yjaiybwf	27	6	virome	virome	NN
cord-001207-yjaiybwf	27	7	of	of	IN
cord-001207-yjaiybwf	27	8	pigs	pig	NNS
cord-001207-yjaiybwf	27	9	has	have	VBZ
cord-001207-yjaiybwf	27	10	been	be	VBN
cord-001207-yjaiybwf	27	11	studied	study	VBN
cord-001207-yjaiybwf	27	12	recently	recently	RB
cord-001207-yjaiybwf	27	13	[	[	-LRB-
cord-001207-yjaiybwf	27	14	2	2	CD
cord-001207-yjaiybwf	27	15	,	,	,
cord-001207-yjaiybwf	27	16	10	10	CD
cord-001207-yjaiybwf	27	17	,	,	,
cord-001207-yjaiybwf	27	18	11	11	CD
cord-001207-yjaiybwf	27	19	]	]	-RRB-
cord-001207-yjaiybwf	27	20	.	.	.
cord-001207-yjaiybwf	28	1	Although	although	IN
cord-001207-yjaiybwf	28	2	samples	sample	NNS
cord-001207-yjaiybwf	28	3	derived	derive	VBN
cord-001207-yjaiybwf	28	4	from	from	IN
cord-001207-yjaiybwf	28	5	different	different	JJ
cord-001207-yjaiybwf	28	6	continents	continent	NNS
cord-001207-yjaiybwf	28	7	had	have	VBD
cord-001207-yjaiybwf	28	8	been	be	VBN
cord-001207-yjaiybwf	28	9	analysed	analyse	VBN
cord-001207-yjaiybwf	28	10	in	in	IN
cord-001207-yjaiybwf	28	11	these	these	DT
cord-001207-yjaiybwf	28	12	studies	study	NNS
cord-001207-yjaiybwf	28	13	,	,	,
cord-001207-yjaiybwf	28	14	the	the	DT
cord-001207-yjaiybwf	28	15	general	general	JJ
cord-001207-yjaiybwf	28	16	composition	composition	NN
cord-001207-yjaiybwf	28	17	was	be	VBD
cord-001207-yjaiybwf	28	18	found	find	VBN
cord-001207-yjaiybwf	28	19	to	to	TO
cord-001207-yjaiybwf	28	20	be	be	VB
cord-001207-yjaiybwf	28	21	similar	similar	JJ
cord-001207-yjaiybwf	28	22	.	.	.
cord-001207-yjaiybwf	29	1	The	the	DT
cord-001207-yjaiybwf	29	2	majority	majority	NN
cord-001207-yjaiybwf	29	3	of	of	IN
cord-001207-yjaiybwf	29	4	the	the	DT
cord-001207-yjaiybwf	29	5	detected	detect	VBN
cord-001207-yjaiybwf	29	6	virus	virus	NN
cord-001207-yjaiybwf	29	7	sequences	sequence	NNS
cord-001207-yjaiybwf	29	8	belonged	belong	VBD
cord-001207-yjaiybwf	29	9	to	to	IN
cord-001207-yjaiybwf	29	10	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	29	11	and	and	CC
cord-001207-yjaiybwf	29	12	pig	pig	NN
cord-001207-yjaiybwf	29	13	viruses	virus	NNS
cord-001207-yjaiybwf	29	14	.	.	.
cord-001207-yjaiybwf	30	1	Only	only	RB
cord-001207-yjaiybwf	30	2	a	a	DT
cord-001207-yjaiybwf	30	3	few	few	JJ
cord-001207-yjaiybwf	30	4	sequences	sequence	NNS
cord-001207-yjaiybwf	30	5	belonged	belong	VBD
cord-001207-yjaiybwf	30	6	to	to	TO
cord-001207-yjaiybwf	30	7	plant	plant	NN
cord-001207-yjaiybwf	30	8	viruses	virus	NNS
cord-001207-yjaiybwf	30	9	as	as	RB
cord-001207-yjaiybwf	30	10	well	well	RB
cord-001207-yjaiybwf	30	11	as	as	IN
cord-001207-yjaiybwf	30	12	other	other	JJ
cord-001207-yjaiybwf	30	13	viruses	virus	NNS
cord-001207-yjaiybwf	30	14	.	.	.
cord-001207-yjaiybwf	31	1	Most	Most	JJS
cord-001207-yjaiybwf	31	2	of	of	IN
cord-001207-yjaiybwf	31	3	the	the	DT
cord-001207-yjaiybwf	31	4	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	31	5	sequences	sequence	NNS
cord-001207-yjaiybwf	31	6	originated	originate	VBD
cord-001207-yjaiybwf	31	7	from	from	IN
cord-001207-yjaiybwf	31	8	viruses	virus	NNS
cord-001207-yjaiybwf	31	9	belonging	belong	VBG
cord-001207-yjaiybwf	31	10	to	to	IN
cord-001207-yjaiybwf	31	11	the	the	DT
cord-001207-yjaiybwf	31	12	families	family	NNS
cord-001207-yjaiybwf	31	13	Siphoviridae	Siphoviridae	NNP
cord-001207-yjaiybwf	31	14	,	,	,
cord-001207-yjaiybwf	31	15	Microviridae	Microviridae	NNP
cord-001207-yjaiybwf	31	16	and	and	CC
cord-001207-yjaiybwf	31	17	Myoviridae	Myoviridae	NNP
cord-001207-yjaiybwf	31	18	[	[	-LRB-
cord-001207-yjaiybwf	31	19	10	10	CD
cord-001207-yjaiybwf	31	20	]	]	-RRB-
cord-001207-yjaiybwf	31	21	.	.	.
cord-001207-yjaiybwf	32	1	The	the	DT
cord-001207-yjaiybwf	32	2	most	most	RBS
cord-001207-yjaiybwf	32	3	abundant	abundant	JJ
cord-001207-yjaiybwf	32	4	porcine	porcine	JJ
cord-001207-yjaiybwf	32	5	viruses	virus	NNS
cord-001207-yjaiybwf	32	6	were	be	VBD
cord-001207-yjaiybwf	32	7	kobuvirus	kobuvirus	NNP
cord-001207-yjaiybwf	32	8	,	,	,
cord-001207-yjaiybwf	32	9	rotavirus	rotavirus	NN
cord-001207-yjaiybwf	32	10	,	,	,
cord-001207-yjaiybwf	32	11	pig	pig	NN
cord-001207-yjaiybwf	32	12	stool	stool	NN
cord-001207-yjaiybwf	32	13	-	-	HYPH
cord-001207-yjaiybwf	32	14	associated	associate	VBN
cord-001207-yjaiybwf	32	15	small	small	JJ
cord-001207-yjaiybwf	32	16	circular	circular	JJ
cord-001207-yjaiybwf	32	17	DNA	dna	NN
cord-001207-yjaiybwf	32	18	virus	virus	NN
cord-001207-yjaiybwf	32	19	(	(	-LRB-
cord-001207-yjaiybwf	32	20	PigSCV	PigSCV	NNP
cord-001207-yjaiybwf	32	21	)	)	-RRB-
cord-001207-yjaiybwf	32	22	,	,	,
cord-001207-yjaiybwf	32	23	astrovirus	astrovirus	NNP
cord-001207-yjaiybwf	32	24	,	,	,
cord-001207-yjaiybwf	32	25	sapovirus	sapovirus	NNP
cord-001207-yjaiybwf	32	26	and	and	CC
cord-001207-yjaiybwf	32	27	enterovirus	enterovirus	NN
cord-001207-yjaiybwf	32	28	B.	B.	NNP
cord-001207-yjaiybwf	32	29	Most	Most	JJS
cord-001207-yjaiybwf	32	30	of	of	IN
cord-001207-yjaiybwf	32	31	them	-PRON-	PRP
cord-001207-yjaiybwf	32	32	represent	represent	VBP
cord-001207-yjaiybwf	32	33	widely	widely	RB
cord-001207-yjaiybwf	32	34	distributed	distribute	VBN
cord-001207-yjaiybwf	32	35	enteric	enteric	JJ
cord-001207-yjaiybwf	32	36	viruses	virus	NNS
cord-001207-yjaiybwf	32	37	of	of	IN
cord-001207-yjaiybwf	32	38	pigs	pig	NNS
cord-001207-yjaiybwf	32	39	[	[	-LRB-
cord-001207-yjaiybwf	32	40	2	2	CD
cord-001207-yjaiybwf	32	41	,	,	,
cord-001207-yjaiybwf	32	42	10	10	CD
cord-001207-yjaiybwf	32	43	,	,	,
cord-001207-yjaiybwf	32	44	11	11	CD
cord-001207-yjaiybwf	32	45	]	]	-RRB-
cord-001207-yjaiybwf	32	46	.	.	.
cord-001207-yjaiybwf	33	1	Whereas	whereas	IN
cord-001207-yjaiybwf	33	2	rotaviruses	rotavirus	NNS
cord-001207-yjaiybwf	33	3	are	be	VBP
cord-001207-yjaiybwf	33	4	well	well	RB
cord-001207-yjaiybwf	33	5	-	-	HYPH
cord-001207-yjaiybwf	33	6	known	know	VBN
cord-001207-yjaiybwf	33	7	pathogens	pathogen	NNS
cord-001207-yjaiybwf	33	8	of	of	IN
cord-001207-yjaiybwf	33	9	piglets	piglet	NNS
cord-001207-yjaiybwf	33	10	,	,	,
cord-001207-yjaiybwf	33	11	which	which	WDT
cord-001207-yjaiybwf	33	12	may	may	MD
cord-001207-yjaiybwf	33	13	lead	lead	VB
cord-001207-yjaiybwf	33	14	to	to	IN
cord-001207-yjaiybwf	33	15	diarrhoea	diarrhoea	NN
cord-001207-yjaiybwf	33	16	[	[	-LRB-
cord-001207-yjaiybwf	33	17	12	12	CD
cord-001207-yjaiybwf	33	18	,	,	,
cord-001207-yjaiybwf	33	19	13	13	CD
cord-001207-yjaiybwf	33	20	,	,	,
cord-001207-yjaiybwf	33	21	14	14	CD
cord-001207-yjaiybwf	33	22	]	]	-RRB-
cord-001207-yjaiybwf	33	23	,	,	,
cord-001207-yjaiybwf	33	24	the	the	DT
cord-001207-yjaiybwf	33	25	clinical	clinical	JJ
cord-001207-yjaiybwf	33	26	importance	importance	NN
cord-001207-yjaiybwf	33	27	of	of	IN
cord-001207-yjaiybwf	33	28	the	the	DT
cord-001207-yjaiybwf	33	29	other	other	JJ
cord-001207-yjaiybwf	33	30	viruses	virus	NNS
cord-001207-yjaiybwf	33	31	is	be	VBZ
cord-001207-yjaiybwf	33	32	a	a	DT
cord-001207-yjaiybwf	33	33	subject	subject	NN
cord-001207-yjaiybwf	33	34	of	of	IN
cord-001207-yjaiybwf	33	35	controversy	controversy	NN
cord-001207-yjaiybwf	33	36	[	[	-LRB-
cord-001207-yjaiybwf	33	37	10	10	CD
cord-001207-yjaiybwf	33	38	,	,	,
cord-001207-yjaiybwf	33	39	[	[	-LRB-
cord-001207-yjaiybwf	33	40	15	15	CD
cord-001207-yjaiybwf	33	41	]	]	-RRB-
cord-001207-yjaiybwf	33	42	[	[	-LRB-
cord-001207-yjaiybwf	33	43	16	16	CD
cord-001207-yjaiybwf	33	44	]	]	-RRB-
cord-001207-yjaiybwf	33	45	[	[	-LRB-
cord-001207-yjaiybwf	33	46	17	17	CD
cord-001207-yjaiybwf	33	47	]	]	-RRB-
cord-001207-yjaiybwf	33	48	[	[	-LRB-
cord-001207-yjaiybwf	33	49	18	18	CD
cord-001207-yjaiybwf	33	50	]	]	-RRB-
cord-001207-yjaiybwf	33	51	[	[	-LRB-
cord-001207-yjaiybwf	33	52	19	19	CD
cord-001207-yjaiybwf	33	53	]	]	-RRB-
cord-001207-yjaiybwf	33	54	[	[	-LRB-
cord-001207-yjaiybwf	33	55	20	20	CD
cord-001207-yjaiybwf	33	56	]	]	-RRB-
cord-001207-yjaiybwf	33	57	[	[	-LRB-
cord-001207-yjaiybwf	33	58	21	21	CD
cord-001207-yjaiybwf	33	59	]	]	-RRB-
cord-001207-yjaiybwf	33	60	[	[	-LRB-
cord-001207-yjaiybwf	33	61	22	22	CD
cord-001207-yjaiybwf	33	62	]	]	-RRB-
cord-001207-yjaiybwf	33	63	.	.	.
cord-001207-yjaiybwf	34	1	Only	only	RB
cord-001207-yjaiybwf	34	2	little	little	JJ
cord-001207-yjaiybwf	34	3	is	be	VBZ
cord-001207-yjaiybwf	34	4	known	know	VBN
cord-001207-yjaiybwf	34	5	about	about	IN
cord-001207-yjaiybwf	34	6	the	the	DT
cord-001207-yjaiybwf	34	7	stability	stability	NN
cord-001207-yjaiybwf	34	8	and	and	CC
cord-001207-yjaiybwf	34	9	dynamics	dynamic	NNS
cord-001207-yjaiybwf	34	10	of	of	IN
cord-001207-yjaiybwf	34	11	the	the	DT
cord-001207-yjaiybwf	34	12	faecal	faecal	JJ
cord-001207-yjaiybwf	34	13	virome	virome	NN
cord-001207-yjaiybwf	34	14	under	under	IN
cord-001207-yjaiybwf	34	15	different	different	JJ
cord-001207-yjaiybwf	34	16	conditions	condition	NNS
cord-001207-yjaiybwf	34	17	.	.	.
cord-001207-yjaiybwf	35	1	For	for	IN
cord-001207-yjaiybwf	35	2	the	the	DT
cord-001207-yjaiybwf	35	3	human	human	JJ
cord-001207-yjaiybwf	35	4	faecal	faecal	JJ
cord-001207-yjaiybwf	35	5	virome	virome	NN
cord-001207-yjaiybwf	35	6	,	,	,
cord-001207-yjaiybwf	35	7	Reyes	Reyes	NNP
cord-001207-yjaiybwf	35	8	et	et	NNP
cord-001207-yjaiybwf	35	9	al	al	NNP
cord-001207-yjaiybwf	35	10	.	.	.
cord-001207-yjaiybwf	36	1	[	[	-LRB-
cord-001207-yjaiybwf	36	2	9	9	CD
cord-001207-yjaiybwf	36	3	]	]	-RRB-
cord-001207-yjaiybwf	36	4	investigated	investigate	VBD
cord-001207-yjaiybwf	36	5	the	the	DT
cord-001207-yjaiybwf	36	6	intra	intra	JJ
cord-001207-yjaiybwf	36	7	-	-	JJ
cord-001207-yjaiybwf	36	8	and	and	CC
cord-001207-yjaiybwf	36	9	interpersonal	interpersonal	JJ
cord-001207-yjaiybwf	36	10	variation	variation	NN
cord-001207-yjaiybwf	36	11	by	by	IN
cord-001207-yjaiybwf	36	12	analysing	analyse	VBG
cord-001207-yjaiybwf	36	13	faeces	faece	NNS
cord-001207-yjaiybwf	36	14	of	of	IN
cord-001207-yjaiybwf	36	15	monozygotic	monozygotic	JJ
cord-001207-yjaiybwf	36	16	twins	twin	NNS
cord-001207-yjaiybwf	36	17	and	and	CC
cord-001207-yjaiybwf	36	18	their	-PRON-	PRP$
cord-001207-yjaiybwf	36	19	mothers	mother	NNS
cord-001207-yjaiybwf	36	20	at	at	IN
cord-001207-yjaiybwf	36	21	different	different	JJ
cord-001207-yjaiybwf	36	22	time	time	NN
cord-001207-yjaiybwf	36	23	-	-	HYPH
cord-001207-yjaiybwf	36	24	points	point	NNS
cord-001207-yjaiybwf	36	25	.	.	.
cord-001207-yjaiybwf	37	1	By	by	IN
cord-001207-yjaiybwf	37	2	this	this	DT
cord-001207-yjaiybwf	37	3	,	,	,
cord-001207-yjaiybwf	37	4	it	-PRON-	PRP
cord-001207-yjaiybwf	37	5	was	be	VBD
cord-001207-yjaiybwf	37	6	found	find	VBN
cord-001207-yjaiybwf	37	7	that	that	IN
cord-001207-yjaiybwf	37	8	the	the	DT
cord-001207-yjaiybwf	37	9	viromes	virome	NNS
cord-001207-yjaiybwf	37	10	were	be	VBD
cord-001207-yjaiybwf	37	11	unique	unique	JJ
cord-001207-yjaiybwf	37	12	to	to	IN
cord-001207-yjaiybwf	37	13	the	the	DT
cord-001207-yjaiybwf	37	14	individuals	individual	NNS
cord-001207-yjaiybwf	37	15	regardless	regardless	RB
cord-001207-yjaiybwf	37	16	of	of	IN
cord-001207-yjaiybwf	37	17	their	-PRON-	PRP$
cord-001207-yjaiybwf	37	18	degree	degree	NN
cord-001207-yjaiybwf	37	19	of	of	IN
cord-001207-yjaiybwf	37	20	genetic	genetic	JJ
cord-001207-yjaiybwf	37	21	relatedness	relatedness	NN
cord-001207-yjaiybwf	37	22	.	.	.
cord-001207-yjaiybwf	38	1	Minot	Minot	NNP
cord-001207-yjaiybwf	38	2	et	et	NNP
cord-001207-yjaiybwf	38	3	al	al	NNP
cord-001207-yjaiybwf	38	4	.	.	.
cord-001207-yjaiybwf	39	1	[	[	-LRB-
cord-001207-yjaiybwf	39	2	1	1	CD
cord-001207-yjaiybwf	39	3	]	]	-RRB-
cord-001207-yjaiybwf	39	4	analysed	analyse	VBD
cord-001207-yjaiybwf	39	5	the	the	DT
cord-001207-yjaiybwf	39	6	inter	inter	JJ
cord-001207-yjaiybwf	39	7	-	-	JJ
cord-001207-yjaiybwf	39	8	individual	individual	JJ
cord-001207-yjaiybwf	39	9	variation	variation	NN
cord-001207-yjaiybwf	39	10	of	of	IN
cord-001207-yjaiybwf	39	11	the	the	DT
cord-001207-yjaiybwf	39	12	human	human	JJ
cord-001207-yjaiybwf	39	13	faecal	faecal	JJ
cord-001207-yjaiybwf	39	14	virome	virome	NN
cord-001207-yjaiybwf	39	15	and	and	CC
cord-001207-yjaiybwf	39	16	its	-PRON-	PRP$
cord-001207-yjaiybwf	39	17	dynamic	dynamic	JJ
cord-001207-yjaiybwf	39	18	response	response	NN
cord-001207-yjaiybwf	39	19	to	to	IN
cord-001207-yjaiybwf	39	20	diet	diet	NN
cord-001207-yjaiybwf	39	21	.	.	.
cord-001207-yjaiybwf	40	1	It	-PRON-	PRP
cord-001207-yjaiybwf	40	2	was	be	VBD
cord-001207-yjaiybwf	40	3	shown	show	VBN
cord-001207-yjaiybwf	40	4	that	that	IN
cord-001207-yjaiybwf	40	5	the	the	DT
cord-001207-yjaiybwf	40	6	largest	large	JJS
cord-001207-yjaiybwf	40	7	source	source	NN
cord-001207-yjaiybwf	40	8	of	of	IN
cord-001207-yjaiybwf	40	9	variance	variance	NN
cord-001207-yjaiybwf	40	10	among	among	IN
cord-001207-yjaiybwf	40	11	the	the	DT
cord-001207-yjaiybwf	40	12	viromes	virome	NNS
cord-001207-yjaiybwf	40	13	was	be	VBD
cord-001207-yjaiybwf	40	14	caused	cause	VBN
cord-001207-yjaiybwf	40	15	by	by	IN
cord-001207-yjaiybwf	40	16	interpersonal	interpersonal	JJ
cord-001207-yjaiybwf	40	17	variations	variation	NNS
cord-001207-yjaiybwf	40	18	and	and	CC
cord-001207-yjaiybwf	40	19	not	not	RB
cord-001207-yjaiybwf	40	20	by	by	IN
cord-001207-yjaiybwf	40	21	the	the	DT
cord-001207-yjaiybwf	40	22	diet	diet	NN
cord-001207-yjaiybwf	40	23	.	.	.
cord-001207-yjaiybwf	41	1	A	a	DT
cord-001207-yjaiybwf	41	2	high	high	JJ
cord-001207-yjaiybwf	41	3	interpersonal	interpersonal	JJ
cord-001207-yjaiybwf	41	4	diversity	diversity	NN
cord-001207-yjaiybwf	41	5	of	of	IN
cord-001207-yjaiybwf	41	6	gut	gut	NN
cord-001207-yjaiybwf	41	7	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	41	8	was	be	VBD
cord-001207-yjaiybwf	41	9	also	also	RB
cord-001207-yjaiybwf	41	10	described	describe	VBN
cord-001207-yjaiybwf	41	11	in	in	IN
cord-001207-yjaiybwf	41	12	two	two	CD
cord-001207-yjaiybwf	41	13	humans	human	NNS
cord-001207-yjaiybwf	41	14	which	which	WDT
cord-001207-yjaiybwf	41	15	were	be	VBD
cord-001207-yjaiybwf	41	16	monitored	monitor	VBN
cord-001207-yjaiybwf	41	17	over	over	IN
cord-001207-yjaiybwf	41	18	a	a	DT
cord-001207-yjaiybwf	41	19	2.5	2.5	CD
cord-001207-yjaiybwf	41	20	year	year	NN
cord-001207-yjaiybwf	41	21	period	period	NN
cord-001207-yjaiybwf	41	22	[	[	-LRB-
cord-001207-yjaiybwf	41	23	23	23	CD
cord-001207-yjaiybwf	41	24	]	]	-RRB-
cord-001207-yjaiybwf	41	25	.	.	.
cord-001207-yjaiybwf	42	1	In	in	IN
cord-001207-yjaiybwf	42	2	another	another	DT
cord-001207-yjaiybwf	42	3	study	study	NN
cord-001207-yjaiybwf	42	4	,	,	,
cord-001207-yjaiybwf	42	5	a	a	DT
cord-001207-yjaiybwf	42	6	much	much	RB
cord-001207-yjaiybwf	42	7	lower	low	JJR
cord-001207-yjaiybwf	42	8	diversity	diversity	NN
cord-001207-yjaiybwf	42	9	of	of	IN
cord-001207-yjaiybwf	42	10	the	the	DT
cord-001207-yjaiybwf	42	11	virus	virus	NN
cord-001207-yjaiybwf	42	12	community	community	NN
cord-001207-yjaiybwf	42	13	was	be	VBD
cord-001207-yjaiybwf	42	14	found	find	VBN
cord-001207-yjaiybwf	42	15	in	in	IN
cord-001207-yjaiybwf	42	16	infants	infant	NNS
cord-001207-yjaiybwf	42	17	as	as	IN
cord-001207-yjaiybwf	42	18	compared	compare	VBN
cord-001207-yjaiybwf	42	19	to	to	IN
cord-001207-yjaiybwf	42	20	adults	adult	NNS
cord-001207-yjaiybwf	42	21	[	[	-LRB-
cord-001207-yjaiybwf	42	22	24	24	CD
cord-001207-yjaiybwf	42	23	]	]	-RRB-
cord-001207-yjaiybwf	42	24	.	.	.
cord-001207-yjaiybwf	43	1	Although	although	IN
cord-001207-yjaiybwf	43	2	this	this	DT
cord-001207-yjaiybwf	43	3	study	study	NN
cord-001207-yjaiybwf	43	4	has	have	VBZ
cord-001207-yjaiybwf	43	5	been	be	VBN
cord-001207-yjaiybwf	43	6	conducted	conduct	VBN
cord-001207-yjaiybwf	43	7	by	by	IN
cord-001207-yjaiybwf	43	8	cloning	clone	VBG
cord-001207-yjaiybwf	43	9	followed	follow	VBN
cord-001207-yjaiybwf	43	10	by	by	IN
cord-001207-yjaiybwf	43	11	classical	classical	JJ
cord-001207-yjaiybwf	43	12	sequencing	sequencing	NN
cord-001207-yjaiybwf	43	13	,	,	,
cord-001207-yjaiybwf	43	14	mathematical	mathematical	JJ
cord-001207-yjaiybwf	43	15	modelling	modelling	NN
cord-001207-yjaiybwf	43	16	of	of	IN
cord-001207-yjaiybwf	43	17	the	the	DT
cord-001207-yjaiybwf	43	18	derived	derive	VBN
cord-001207-yjaiybwf	43	19	sequence	sequence	NN
cord-001207-yjaiybwf	43	20	data	datum	NNS
cord-001207-yjaiybwf	43	21	indicated	indicate	VBD
cord-001207-yjaiybwf	43	22	that	that	IN
cord-001207-yjaiybwf	43	23	the	the	DT
cord-001207-yjaiybwf	43	24	virome	virome	NN
cord-001207-yjaiybwf	43	25	of	of	IN
cord-001207-yjaiybwf	43	26	adults	adult	NNS
cord-001207-yjaiybwf	43	27	was	be	VBD
cord-001207-yjaiybwf	43	28	composed	compose	VBN
cord-001207-yjaiybwf	43	29	of	of	IN
cord-001207-yjaiybwf	43	30	approximately	approximately	RB
cord-001207-yjaiybwf	43	31	2000	2000	CD
cord-001207-yjaiybwf	43	32	genotypes	genotype	NNS
cord-001207-yjaiybwf	43	33	as	as	IN
cord-001207-yjaiybwf	43	34	compared	compare	VBN
cord-001207-yjaiybwf	43	35	to	to	IN
cord-001207-yjaiybwf	43	36	only	only	RB
cord-001207-yjaiybwf	43	37	8	8	CD
cord-001207-yjaiybwf	43	38	genotypes	genotype	NNS
cord-001207-yjaiybwf	43	39	in	in	IN
cord-001207-yjaiybwf	43	40	one	one	CD
cord-001207-yjaiybwf	43	41	week	week	NN
cord-001207-yjaiybwf	43	42	-	-	HYPH
cord-001207-yjaiybwf	43	43	old	old	JJ
cord-001207-yjaiybwf	43	44	infants	infant	NNS
cord-001207-yjaiybwf	43	45	.	.	.
cord-001207-yjaiybwf	44	1	The	the	DT
cord-001207-yjaiybwf	44	2	observed	observed	JJ
cord-001207-yjaiybwf	44	3	beneficial	beneficial	JJ
cord-001207-yjaiybwf	44	4	effects	effect	NNS
cord-001207-yjaiybwf	44	5	of	of	IN
cord-001207-yjaiybwf	44	6	probiotic	probiotic	JJ
cord-001207-yjaiybwf	44	7	bacteria	bacteria	NNS
cord-001207-yjaiybwf	44	8	on	on	IN
cord-001207-yjaiybwf	44	9	enteric	enteric	JJ
cord-001207-yjaiybwf	44	10	virus	virus	NN
cord-001207-yjaiybwf	44	11	infections	infection	NNS
cord-001207-yjaiybwf	44	12	have	have	VBP
cord-001207-yjaiybwf	44	13	been	be	VBN
cord-001207-yjaiybwf	44	14	recently	recently	RB
cord-001207-yjaiybwf	44	15	reviewed	review	VBN
cord-001207-yjaiybwf	44	16	by	by	IN
cord-001207-yjaiybwf	44	17	Colbere	Colbere	NNP
cord-001207-yjaiybwf	44	18	-	-	HYPH
cord-001207-yjaiybwf	44	19	Garapin	Garapin	NNP
cord-001207-yjaiybwf	44	20	et	et	FW
cord-001207-yjaiybwf	44	21	al	al	NNP
cord-001207-yjaiybwf	44	22	.	.	.
cord-001207-yjaiybwf	45	1	[	[	-LRB-
cord-001207-yjaiybwf	45	2	6	6	CD
cord-001207-yjaiybwf	45	3	]	]	-RRB-
cord-001207-yjaiybwf	45	4	.	.	.
cord-001207-yjaiybwf	46	1	This	this	DT
cord-001207-yjaiybwf	46	2	includes	include	VBZ
cord-001207-yjaiybwf	46	3	clinical	clinical	JJ
cord-001207-yjaiybwf	46	4	studies	study	NNS
cord-001207-yjaiybwf	46	5	showing	show	VBG
cord-001207-yjaiybwf	46	6	beneficial	beneficial	JJ
cord-001207-yjaiybwf	46	7	effects	effect	NNS
cord-001207-yjaiybwf	46	8	of	of	IN
cord-001207-yjaiybwf	46	9	probiotic	probiotic	JJ
cord-001207-yjaiybwf	46	10	bacteria	bacteria	NNS
cord-001207-yjaiybwf	46	11	in	in	IN
cord-001207-yjaiybwf	46	12	children	child	NNS
cord-001207-yjaiybwf	46	13	with	with	IN
cord-001207-yjaiybwf	46	14	rotavirus	rotavirus	NN
cord-001207-yjaiybwf	46	15	-	-	HYPH
cord-001207-yjaiybwf	46	16	caused	cause	VBN
cord-001207-yjaiybwf	46	17	diarrhoea	diarrhoea	NN
cord-001207-yjaiybwf	46	18	[	[	-LRB-
cord-001207-yjaiybwf	46	19	25	25	CD
cord-001207-yjaiybwf	46	20	]	]	-RRB-
cord-001207-yjaiybwf	46	21	[	[	-LRB-
cord-001207-yjaiybwf	46	22	26	26	CD
cord-001207-yjaiybwf	46	23	]	]	-RRB-
cord-001207-yjaiybwf	46	24	[	[	-LRB-
cord-001207-yjaiybwf	46	25	27	27	CD
cord-001207-yjaiybwf	46	26	]	]	-RRB-
cord-001207-yjaiybwf	46	27	.	.	.
cord-001207-yjaiybwf	47	1	Feeding	feed	VBG
cord-001207-yjaiybwf	47	2	with	with	IN
cord-001207-yjaiybwf	47	3	probiotic	probiotic	JJ
cord-001207-yjaiybwf	47	4	microorganisms	microorganism	NNS
cord-001207-yjaiybwf	47	5	such	such	JJ
cord-001207-yjaiybwf	47	6	as	as	IN
cord-001207-yjaiybwf	47	7	Lactobacillus	lactobacillus	NN
cord-001207-yjaiybwf	47	8	rhamnosus	rhamnosus	NN
cord-001207-yjaiybwf	47	9	GG	GG	NNP
cord-001207-yjaiybwf	47	10	,	,	,
cord-001207-yjaiybwf	47	11	Saccharomyces	Saccharomyces	NNP
cord-001207-yjaiybwf	47	12	boulardii	boulardii	NNP
cord-001207-yjaiybwf	47	13	or	or	CC
cord-001207-yjaiybwf	47	14	Bifidobacterium	Bifidobacterium	NNP
cord-001207-yjaiybwf	47	15	lactis	lactis	NNP
cord-001207-yjaiybwf	47	16	resulted	result	VBD
cord-001207-yjaiybwf	47	17	in	in	IN
cord-001207-yjaiybwf	47	18	milder	mild	JJR
cord-001207-yjaiybwf	47	19	clinical	clinical	JJ
cord-001207-yjaiybwf	47	20	symptoms	symptom	NNS
cord-001207-yjaiybwf	47	21	,	,	,
cord-001207-yjaiybwf	47	22	reduced	reduce	VBN
cord-001207-yjaiybwf	47	23	virus	virus	NN
cord-001207-yjaiybwf	47	24	shedding	shed	VBG
cord-001207-yjaiybwf	47	25	and	and	CC
cord-001207-yjaiybwf	47	26	shortened	shorten	VBD
cord-001207-yjaiybwf	47	27	the	the	DT
cord-001207-yjaiybwf	47	28	duration	duration	NN
cord-001207-yjaiybwf	47	29	of	of	IN
cord-001207-yjaiybwf	47	30	diarrhoea	diarrhoea	NN
cord-001207-yjaiybwf	47	31	in	in	IN
cord-001207-yjaiybwf	47	32	children	child	NNS
cord-001207-yjaiybwf	47	33	[	[	-LRB-
cord-001207-yjaiybwf	47	34	27	27	CD
cord-001207-yjaiybwf	47	35	]	]	-RRB-
cord-001207-yjaiybwf	47	36	[	[	-LRB-
cord-001207-yjaiybwf	47	37	28	28	CD
cord-001207-yjaiybwf	47	38	]	]	-RRB-
cord-001207-yjaiybwf	47	39	[	[	-LRB-
cord-001207-yjaiybwf	47	40	29	29	CD
cord-001207-yjaiybwf	47	41	]	]	-RRB-
cord-001207-yjaiybwf	47	42	.	.	.
cord-001207-yjaiybwf	48	1	In	in	IN
cord-001207-yjaiybwf	48	2	pigs	pig	NNS
cord-001207-yjaiybwf	48	3	,	,	,
cord-001207-yjaiybwf	48	4	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	48	5	(	(	-LRB-
cord-001207-yjaiybwf	48	6	E.	E.	NNP
cord-001207-yjaiybwf	48	7	)	)	-RRB-
cord-001207-yjaiybwf	48	8	faecium	faecium	NN
cord-001207-yjaiybwf	48	9	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	48	10	10415	10415	CD
cord-001207-yjaiybwf	48	11	is	be	VBZ
cord-001207-yjaiybwf	48	12	a	a	DT
cord-001207-yjaiybwf	48	13	commonly	commonly	RB
cord-001207-yjaiybwf	48	14	used	use	VBN
cord-001207-yjaiybwf	48	15	probiotic	probiotic	JJ
cord-001207-yjaiybwf	48	16	bacterium	bacterium	NN
cord-001207-yjaiybwf	48	17	[	[	-LRB-
cord-001207-yjaiybwf	48	18	35	35	CD
cord-001207-yjaiybwf	48	19	,	,	,
cord-001207-yjaiybwf	48	20	37	37	CD
cord-001207-yjaiybwf	48	21	]	]	-RRB-
cord-001207-yjaiybwf	48	22	.	.	.
cord-001207-yjaiybwf	49	1	It	-PRON-	PRP
cord-001207-yjaiybwf	49	2	has	have	VBZ
cord-001207-yjaiybwf	49	3	been	be	VBN
cord-001207-yjaiybwf	49	4	shown	show	VBN
cord-001207-yjaiybwf	49	5	recently	recently	RB
cord-001207-yjaiybwf	49	6	,	,	,
cord-001207-yjaiybwf	49	7	that	that	IN
cord-001207-yjaiybwf	49	8	feeding	feeding	NN
cord-001207-yjaiybwf	49	9	of	of	IN
cord-001207-yjaiybwf	49	10	pigs	pig	NNS
cord-001207-yjaiybwf	49	11	with	with	IN
cord-001207-yjaiybwf	49	12	this	this	DT
cord-001207-yjaiybwf	49	13	probiotic	probiotic	JJ
cord-001207-yjaiybwf	49	14	bacterium	bacterium	NN
cord-001207-yjaiybwf	49	15	affected	affect	VBD
cord-001207-yjaiybwf	49	16	shedding	shedding	NN
cord-001207-yjaiybwf	49	17	of	of	IN
cord-001207-yjaiybwf	49	18	enteric	enteric	JJ
cord-001207-yjaiybwf	49	19	viruses	virus	NNS
cord-001207-yjaiybwf	49	20	dependent	dependent	JJ
cord-001207-yjaiybwf	49	21	on	on	IN
cord-001207-yjaiybwf	49	22	the	the	DT
cord-001207-yjaiybwf	49	23	virus	virus	NN
cord-001207-yjaiybwf	49	24	species	specie	NNS
cord-001207-yjaiybwf	49	25	[	[	-LRB-
cord-001207-yjaiybwf	49	26	30	30	CD
cord-001207-yjaiybwf	49	27	]	]	-RRB-
cord-001207-yjaiybwf	49	28	.	.	.
cord-001207-yjaiybwf	50	1	Especially	especially	RB
cord-001207-yjaiybwf	50	2	,	,	,
cord-001207-yjaiybwf	50	3	rotavirus	rotavirus	NN
cord-001207-yjaiybwf	50	4	was	be	VBD
cord-001207-yjaiybwf	50	5	shed	shed	VBN
cord-001207-yjaiybwf	50	6	later	later	RB
cord-001207-yjaiybwf	50	7	and	and	CC
cord-001207-yjaiybwf	50	8	in	in	IN
cord-001207-yjaiybwf	50	9	lower	low	JJR
cord-001207-yjaiybwf	50	10	amounts	amount	NNS
cord-001207-yjaiybwf	50	11	in	in	IN
cord-001207-yjaiybwf	50	12	the	the	DT
cord-001207-yjaiybwf	50	13	group	group	NN
cord-001207-yjaiybwf	50	14	of	of	IN
cord-001207-yjaiybwf	50	15	piglets	piglet	NNS
cord-001207-yjaiybwf	50	16	that	that	WDT
cord-001207-yjaiybwf	50	17	received	receive	VBD
cord-001207-yjaiybwf	50	18	E.	E.	NNP
cord-001207-yjaiybwf	50	19	faecium	faecium	NN
cord-001207-yjaiybwf	50	20	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	50	21	10415	10415	CD
cord-001207-yjaiybwf	50	22	as	as	IN
cord-001207-yjaiybwf	50	23	compared	compare	VBN
cord-001207-yjaiybwf	50	24	to	to	IN
cord-001207-yjaiybwf	50	25	the	the	DT
cord-001207-yjaiybwf	50	26	control	control	NN
cord-001207-yjaiybwf	50	27	group	group	NN
cord-001207-yjaiybwf	50	28	.	.	.
cord-001207-yjaiybwf	51	1	The	the	DT
cord-001207-yjaiybwf	51	2	specific	specific	JJ
cord-001207-yjaiybwf	51	3	mechanisms	mechanism	NNS
cord-001207-yjaiybwf	51	4	responsible	responsible	JJ
cord-001207-yjaiybwf	51	5	for	for	IN
cord-001207-yjaiybwf	51	6	this	this	DT
cord-001207-yjaiybwf	51	7	effect	effect	NN
cord-001207-yjaiybwf	51	8	are	be	VBP
cord-001207-yjaiybwf	51	9	not	not	RB
cord-001207-yjaiybwf	51	10	known	know	VBN
cord-001207-yjaiybwf	51	11	so	so	RB
cord-001207-yjaiybwf	51	12	far	far	RB
cord-001207-yjaiybwf	51	13	.	.	.
cord-001207-yjaiybwf	52	1	However	however	RB
cord-001207-yjaiybwf	52	2	,	,	,
cord-001207-yjaiybwf	52	3	changes	change	NNS
cord-001207-yjaiybwf	52	4	in	in	IN
cord-001207-yjaiybwf	52	5	the	the	DT
cord-001207-yjaiybwf	52	6	mucosal	mucosal	JJ
cord-001207-yjaiybwf	52	7	and	and	CC
cord-001207-yjaiybwf	52	8	systemic	systemic	JJ
cord-001207-yjaiybwf	52	9	immunity	immunity	NN
cord-001207-yjaiybwf	52	10	due	due	IN
cord-001207-yjaiybwf	52	11	to	to	IN
cord-001207-yjaiybwf	52	12	feeding	feed	VBG
cord-001207-yjaiybwf	52	13	with	with	IN
cord-001207-yjaiybwf	52	14	E.	E.	NNP
cord-001207-yjaiybwf	52	15	faecium	faecium	NNP
cord-001207-yjaiybwf	53	1	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	53	2	10415	10415	CD
cord-001207-yjaiybwf	53	3	have	have	VBP
cord-001207-yjaiybwf	53	4	been	be	VBN
cord-001207-yjaiybwf	53	5	described	describe	VBN
cord-001207-yjaiybwf	53	6	[	[	-LRB-
cord-001207-yjaiybwf	53	7	31	31	CD
cord-001207-yjaiybwf	53	8	]	]	-RRB-
cord-001207-yjaiybwf	53	9	[	[	-LRB-
cord-001207-yjaiybwf	53	10	32	32	CD
cord-001207-yjaiybwf	53	11	]	]	-RRB-
cord-001207-yjaiybwf	54	1	[	[	-LRB-
cord-001207-yjaiybwf	54	2	33	33	CD
cord-001207-yjaiybwf	54	3	]	]	-RRB-
cord-001207-yjaiybwf	54	4	[	[	-LRB-
cord-001207-yjaiybwf	54	5	34	34	CD
cord-001207-yjaiybwf	54	6	]	]	-RRB-
cord-001207-yjaiybwf	54	7	.	.	.
cord-001207-yjaiybwf	55	1	In	in	IN
cord-001207-yjaiybwf	55	2	addition	addition	NN
cord-001207-yjaiybwf	55	3	,	,	,
cord-001207-yjaiybwf	55	4	direct	direct	JJ
cord-001207-yjaiybwf	55	5	interactions	interaction	NNS
cord-001207-yjaiybwf	55	6	of	of	IN
cord-001207-yjaiybwf	55	7	this	this	DT
cord-001207-yjaiybwf	55	8	bacterium	bacterium	NN
cord-001207-yjaiybwf	55	9	with	with	IN
cord-001207-yjaiybwf	55	10	enteric	enteric	JJ
cord-001207-yjaiybwf	55	11	virus	virus	NN
cord-001207-yjaiybwf	55	12	particles	particle	NNS
cord-001207-yjaiybwf	55	13	have	have	VBP
cord-001207-yjaiybwf	55	14	been	be	VBN
cord-001207-yjaiybwf	55	15	observed	observe	VBN
cord-001207-yjaiybwf	55	16	in	in	IN
cord-001207-yjaiybwf	55	17	in	in	FW
cord-001207-yjaiybwf	55	18	vitro	vitro	FW
cord-001207-yjaiybwf	55	19	studies	study	NNS
cord-001207-yjaiybwf	55	20	[	[	-LRB-
cord-001207-yjaiybwf	55	21	35	35	CD
cord-001207-yjaiybwf	55	22	]	]	-RRB-
cord-001207-yjaiybwf	55	23	.	.	.
cord-001207-yjaiybwf	56	1	However	however	RB
cord-001207-yjaiybwf	56	2	,	,	,
cord-001207-yjaiybwf	56	3	it	-PRON-	PRP
cord-001207-yjaiybwf	56	4	is	be	VBZ
cord-001207-yjaiybwf	56	5	not	not	RB
cord-001207-yjaiybwf	56	6	known	know	VBN
cord-001207-yjaiybwf	56	7	so	so	RB
cord-001207-yjaiybwf	56	8	far	far	RB
cord-001207-yjaiybwf	56	9	,	,	,
cord-001207-yjaiybwf	56	10	whether	whether	IN
cord-001207-yjaiybwf	56	11	probiotic	probiotic	JJ
cord-001207-yjaiybwf	56	12	bacteria	bacteria	NNS
cord-001207-yjaiybwf	56	13	can	can	MD
cord-001207-yjaiybwf	56	14	also	also	RB
cord-001207-yjaiybwf	56	15	influence	influence	VB
cord-001207-yjaiybwf	56	16	the	the	DT
cord-001207-yjaiybwf	56	17	general	general	JJ
cord-001207-yjaiybwf	56	18	composition	composition	NN
cord-001207-yjaiybwf	56	19	of	of	IN
cord-001207-yjaiybwf	56	20	the	the	DT
cord-001207-yjaiybwf	56	21	faecal	faecal	JJ
cord-001207-yjaiybwf	56	22	virome	virome	NN
cord-001207-yjaiybwf	56	23	,	,	,
cord-001207-yjaiybwf	56	24	e.g.	e.g.	RB
cord-001207-yjaiybwf	56	25	by	by	IN
cord-001207-yjaiybwf	56	26	changing	change	VBG
cord-001207-yjaiybwf	56	27	the	the	DT
cord-001207-yjaiybwf	56	28	composition	composition	NN
cord-001207-yjaiybwf	56	29	of	of	IN
cord-001207-yjaiybwf	56	30	the	the	DT
cord-001207-yjaiybwf	56	31	bacterial	bacterial	JJ
cord-001207-yjaiybwf	56	32	community	community	NN
cord-001207-yjaiybwf	56	33	,	,	,
cord-001207-yjaiybwf	56	34	which	which	WDT
cord-001207-yjaiybwf	56	35	represents	represent	VBZ
cord-001207-yjaiybwf	56	36	the	the	DT
cord-001207-yjaiybwf	56	37	host	host	NN
cord-001207-yjaiybwf	56	38	population	population	NN
cord-001207-yjaiybwf	56	39	for	for	IN
cord-001207-yjaiybwf	56	40	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	56	41	,	,	,
cord-001207-yjaiybwf	56	42	or	or	CC
cord-001207-yjaiybwf	56	43	by	by	IN
cord-001207-yjaiybwf	56	44	direct	direct	JJ
cord-001207-yjaiybwf	56	45	interactions	interaction	NNS
cord-001207-yjaiybwf	56	46	with	with	IN
cord-001207-yjaiybwf	56	47	specific	specific	JJ
cord-001207-yjaiybwf	56	48	viruses	virus	NNS
cord-001207-yjaiybwf	56	49	.	.	.
cord-001207-yjaiybwf	57	1	The	the	DT
cord-001207-yjaiybwf	57	2	primary	primary	JJ
cord-001207-yjaiybwf	57	3	aim	aim	NN
cord-001207-yjaiybwf	57	4	of	of	IN
cord-001207-yjaiybwf	57	5	the	the	DT
cord-001207-yjaiybwf	57	6	presented	present	VBN
cord-001207-yjaiybwf	57	7	study	study	NN
cord-001207-yjaiybwf	57	8	was	be	VBD
cord-001207-yjaiybwf	57	9	to	to	TO
cord-001207-yjaiybwf	57	10	analyze	analyze	VB
cord-001207-yjaiybwf	57	11	the	the	DT
cord-001207-yjaiybwf	57	12	effect	effect	NN
cord-001207-yjaiybwf	57	13	of	of	IN
cord-001207-yjaiybwf	57	14	the	the	DT
cord-001207-yjaiybwf	57	15	probiotic	probiotic	JJ
cord-001207-yjaiybwf	57	16	bacterium	bacterium	NN
cord-001207-yjaiybwf	57	17	E.	E.	NNP
cord-001207-yjaiybwf	57	18	faecium	faecium	NN
cord-001207-yjaiybwf	58	1	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	58	2	10415	10415	CD
cord-001207-yjaiybwf	58	3	on	on	IN
cord-001207-yjaiybwf	58	4	the	the	DT
cord-001207-yjaiybwf	58	5	general	general	JJ
cord-001207-yjaiybwf	58	6	composition	composition	NN
cord-001207-yjaiybwf	58	7	of	of	IN
cord-001207-yjaiybwf	58	8	the	the	DT
cord-001207-yjaiybwf	58	9	faecal	faecal	JJ
cord-001207-yjaiybwf	58	10	virome	virome	NN
cord-001207-yjaiybwf	58	11	in	in	IN
cord-001207-yjaiybwf	58	12	pigs	pig	NNS
cord-001207-yjaiybwf	58	13	.	.	.
cord-001207-yjaiybwf	59	1	Faecal	Faecal	NNP
cord-001207-yjaiybwf	59	2	samples	sample	NNS
cord-001207-yjaiybwf	59	3	from	from	IN
cord-001207-yjaiybwf	59	4	sows	sow	NNS
cord-001207-yjaiybwf	59	5	and	and	CC
cord-001207-yjaiybwf	59	6	their	-PRON-	PRP$
cord-001207-yjaiybwf	59	7	piglets	piglet	NNS
cord-001207-yjaiybwf	59	8	experimentally	experimentally	RB
cord-001207-yjaiybwf	59	9	fed	feed	VBD
cord-001207-yjaiybwf	59	10	with	with	IN
cord-001207-yjaiybwf	59	11	or	or	CC
cord-001207-yjaiybwf	59	12	without	without	IN
cord-001207-yjaiybwf	59	13	the	the	DT
cord-001207-yjaiybwf	59	14	probiotic	probiotic	JJ
cord-001207-yjaiybwf	59	15	bacterium	bacterium	NN
cord-001207-yjaiybwf	59	16	were	be	VBD
cord-001207-yjaiybwf	59	17	analyzed	analyze	VBN
cord-001207-yjaiybwf	59	18	using	use	VBG
cord-001207-yjaiybwf	59	19	a	a	DT
cord-001207-yjaiybwf	59	20	process	process	NN
cord-001207-yjaiybwf	59	21	-	-	HYPH
cord-001207-yjaiybwf	59	22	controlled	control	VBN
cord-001207-yjaiybwf	59	23	deep	deep	JJ
cord-001207-yjaiybwf	59	24	sequencing	sequencing	NN
cord-001207-yjaiybwf	59	25	method	method	NN
cord-001207-yjaiybwf	59	26	.	.	.
cord-001207-yjaiybwf	60	1	The	the	DT
cord-001207-yjaiybwf	60	2	populations	population	NNS
cord-001207-yjaiybwf	60	3	of	of	IN
cord-001207-yjaiybwf	60	4	the	the	DT
cord-001207-yjaiybwf	60	5	detected	detect	VBN
cord-001207-yjaiybwf	60	6	virus	virus	NN
cord-001207-yjaiybwf	60	7	sequences	sequence	NNS
cord-001207-yjaiybwf	60	8	were	be	VBD
cord-001207-yjaiybwf	60	9	compared	compare	VBN
cord-001207-yjaiybwf	60	10	between	between	IN
cord-001207-yjaiybwf	60	11	the	the	DT
cord-001207-yjaiybwf	60	12	feeding	feed	VBG
cord-001207-yjaiybwf	60	13	groups	group	NNS
cord-001207-yjaiybwf	60	14	as	as	RB
cord-001207-yjaiybwf	60	15	well	well	RB
cord-001207-yjaiybwf	60	16	as	as	IN
cord-001207-yjaiybwf	60	17	the	the	DT
cord-001207-yjaiybwf	60	18	age	age	NN
cord-001207-yjaiybwf	60	19	groups	group	NNS
cord-001207-yjaiybwf	60	20	and	and	CC
cord-001207-yjaiybwf	60	21	general	general	JJ
cord-001207-yjaiybwf	60	22	insights	insight	NNS
cord-001207-yjaiybwf	60	23	into	into	IN
cord-001207-yjaiybwf	60	24	the	the	DT
cord-001207-yjaiybwf	60	25	stability	stability	NN
cord-001207-yjaiybwf	60	26	and	and	CC
cord-001207-yjaiybwf	60	27	dynamics	dynamic	NNS
cord-001207-yjaiybwf	60	28	of	of	IN
cord-001207-yjaiybwf	60	29	the	the	DT
cord-001207-yjaiybwf	60	30	pig	pig	NN
cord-001207-yjaiybwf	60	31	faecal	faecal	JJ
cord-001207-yjaiybwf	60	32	virome	virome	NNP
cord-001207-yjaiybwf	60	33	under	under	IN
cord-001207-yjaiybwf	60	34	different	different	JJ
cord-001207-yjaiybwf	60	35	age	age	NN
cord-001207-yjaiybwf	60	36	-	-	HYPH
cord-001207-yjaiybwf	60	37	related	relate	VBN
cord-001207-yjaiybwf	60	38	and	and	CC
cord-001207-yjaiybwf	60	39	feeding	feeding	NN
cord-001207-yjaiybwf	60	40	conditions	condition	NNS
cord-001207-yjaiybwf	60	41	were	be	VBD
cord-001207-yjaiybwf	60	42	generated	generate	VBN
cord-001207-yjaiybwf	60	43	.	.	.
cord-001207-yjaiybwf	61	1	The	the	DT
cord-001207-yjaiybwf	61	2	animal	animal	NN
cord-001207-yjaiybwf	61	3	experiment	experiment	NN
cord-001207-yjaiybwf	61	4	(	(	-LRB-
cord-001207-yjaiybwf	61	5	pig	pig	NN
cord-001207-yjaiybwf	61	6	feeding	feed	VBG
cord-001207-yjaiybwf	61	7	trial	trial	NN
cord-001207-yjaiybwf	61	8	)	)	-RRB-
cord-001207-yjaiybwf	61	9	was	be	VBD
cord-001207-yjaiybwf	61	10	approved	approve	VBN
cord-001207-yjaiybwf	61	11	by	by	IN
cord-001207-yjaiybwf	61	12	the	the	DT
cord-001207-yjaiybwf	61	13	local	local	JJ
cord-001207-yjaiybwf	61	14	state	state	NN
cord-001207-yjaiybwf	61	15	office	office	NNP
cord-001207-yjaiybwf	61	16	of	of	IN
cord-001207-yjaiybwf	61	17	occupational	occupational	NNP
cord-001207-yjaiybwf	61	18	health	health	NNP
cord-001207-yjaiybwf	61	19	and	and	CC
cord-001207-yjaiybwf	61	20	technical	technical	JJ
cord-001207-yjaiybwf	61	21	safety	safety	NN
cord-001207-yjaiybwf	61	22	''	''	''
cord-001207-yjaiybwf	62	1	Landesamt	Landesamt	NNP
cord-001207-yjaiybwf	62	2	für	für	IN
cord-001207-yjaiybwf	62	3	Gesundheit	Gesundheit	NNP
cord-001207-yjaiybwf	62	4	und	und	IN
cord-001207-yjaiybwf	62	5	Soziales	Soziales	NNP
cord-001207-yjaiybwf	62	6	Berlin	Berlin	NNP
cord-001207-yjaiybwf	62	7	'	'	''
cord-001207-yjaiybwf	62	8	'	'	''
cord-001207-yjaiybwf	62	9	(	(	-LRB-
cord-001207-yjaiybwf	62	10	LaGeSo	LaGeSo	NNP
cord-001207-yjaiybwf	62	11	Reg	Reg	NNP
cord-001207-yjaiybwf	62	12	.	.	.
cord-001207-yjaiybwf	63	1	Nr	Nr	NNP
cord-001207-yjaiybwf	63	2	.	.	NNP
cord-001207-yjaiybwf	63	3	0347/09	0347/09	CD
cord-001207-yjaiybwf	63	4	)	)	-RRB-
cord-001207-yjaiybwf	63	5	.	.	.
cord-001207-yjaiybwf	64	1	Animal	Animal	NNP
cord-001207-yjaiybwf	64	2	Experiment	Experiment	NNP
cord-001207-yjaiybwf	64	3	and	and	CC
cord-001207-yjaiybwf	64	4	Sampling	Sampling	NNP
cord-001207-yjaiybwf	64	5	Scheme	Scheme	NNP
cord-001207-yjaiybwf	65	1	The	the	DT
cord-001207-yjaiybwf	65	2	design	design	NN
cord-001207-yjaiybwf	65	3	of	of	IN
cord-001207-yjaiybwf	65	4	the	the	DT
cord-001207-yjaiybwf	65	5	pig	pig	NN
cord-001207-yjaiybwf	65	6	feeding	feed	VBG
cord-001207-yjaiybwf	65	7	trial	trial	NN
cord-001207-yjaiybwf	65	8	has	have	VBZ
cord-001207-yjaiybwf	65	9	been	be	VBN
cord-001207-yjaiybwf	65	10	described	describe	VBN
cord-001207-yjaiybwf	65	11	in	in	IN
cord-001207-yjaiybwf	65	12	detail	detail	NN
cord-001207-yjaiybwf	65	13	by	by	IN
cord-001207-yjaiybwf	65	14	Martin	Martin	NNP
cord-001207-yjaiybwf	65	15	et	et	NNP
cord-001207-yjaiybwf	65	16	al	al	NNP
cord-001207-yjaiybwf	65	17	.	.	.
cord-001207-yjaiybwf	66	1	[	[	-LRB-
cord-001207-yjaiybwf	66	2	36	36	CD
cord-001207-yjaiybwf	66	3	]	]	-RRB-
cord-001207-yjaiybwf	66	4	and	and	CC
cord-001207-yjaiybwf	66	5	is	be	VBZ
cord-001207-yjaiybwf	66	6	schematically	schematically	RB
cord-001207-yjaiybwf	66	7	shown	show	VBN
cord-001207-yjaiybwf	66	8	in	in	IN
cord-001207-yjaiybwf	66	9	Figure	figure	NN
cord-001207-yjaiybwf	66	10	1	1	CD
cord-001207-yjaiybwf	66	11	.	.	.
cord-001207-yjaiybwf	67	1	Briefly	briefly	RB
cord-001207-yjaiybwf	67	2	,	,	,
cord-001207-yjaiybwf	67	3	sows	sow	NNS
cord-001207-yjaiybwf	67	4	and	and	CC
cord-001207-yjaiybwf	67	5	their	-PRON-	PRP$
cord-001207-yjaiybwf	67	6	piglets	piglet	NNS
cord-001207-yjaiybwf	67	7	received	receive	VBD
cord-001207-yjaiybwf	67	8	either	either	CC
cord-001207-yjaiybwf	67	9	no	no	DT
cord-001207-yjaiybwf	67	10	probiotic	probiotic	JJ
cord-001207-yjaiybwf	67	11	bacterium	bacterium	NN
cord-001207-yjaiybwf	67	12	or	or	CC
cord-001207-yjaiybwf	67	13	approximately	approximately	RB
cord-001207-yjaiybwf	67	14	5610	5610	CD
cord-001207-yjaiybwf	67	15	6	6	CD
cord-001207-yjaiybwf	67	16	cfu	cfu	NNP
cord-001207-yjaiybwf	67	17	/	/	SYM
cord-001207-yjaiybwf	67	18	g	g	NNP
cord-001207-yjaiybwf	67	19	E.	E.	NNP
cord-001207-yjaiybwf	67	20	faecium	faecium	NN
cord-001207-yjaiybwf	67	21	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	67	22	10415	10415	CD
cord-001207-yjaiybwf	67	23	,	,	,
cord-001207-yjaiybwf	67	24	which	which	WDT
cord-001207-yjaiybwf	67	25	was	be	VBD
cord-001207-yjaiybwf	67	26	fed	feed	VBN
cord-001207-yjaiybwf	67	27	with	with	IN
cord-001207-yjaiybwf	67	28	their	-PRON-	PRP$
cord-001207-yjaiybwf	67	29	diet	diet	NN
cord-001207-yjaiybwf	67	30	starting	start	VBG
cord-001207-yjaiybwf	67	31	at	at	IN
cord-001207-yjaiybwf	67	32	28	28	CD
cord-001207-yjaiybwf	67	33	days	day	NNS
cord-001207-yjaiybwf	67	34	ante	ante	NNP
cord-001207-yjaiybwf	67	35	partum	partum	NNP
cord-001207-yjaiybwf	67	36	.	.	.
cord-001207-yjaiybwf	68	1	The	the	DT
cord-001207-yjaiybwf	68	2	sows	sow	NNS
cord-001207-yjaiybwf	68	3	received	receive	VBD
cord-001207-yjaiybwf	68	4	a	a	DT
cord-001207-yjaiybwf	68	5	commercial	commercial	JJ
cord-001207-yjaiybwf	68	6	diet	diet	NN
cord-001207-yjaiybwf	68	7	(	(	-LRB-
cord-001207-yjaiybwf	68	8	UNA	UNA	NNP
cord-001207-yjaiybwf	68	9	-	-	HYPH
cord-001207-yjaiybwf	68	10	HAKRA	HAKRA	NNP
cord-001207-yjaiybwf	68	11	,	,	,
cord-001207-yjaiybwf	68	12	Hamburg	Hamburg	NNP
cord-001207-yjaiybwf	68	13	,	,	,
cord-001207-yjaiybwf	68	14	Germany	Germany	NNP
cord-001207-yjaiybwf	68	15	)	)	-RRB-
cord-001207-yjaiybwf	68	16	.	.	.
cord-001207-yjaiybwf	69	1	Additional	additional	JJ
cord-001207-yjaiybwf	69	2	feeding	feeding	NN
cord-001207-yjaiybwf	69	3	of	of	IN
cord-001207-yjaiybwf	69	4	the	the	DT
cord-001207-yjaiybwf	69	5	piglets	piglet	NNS
cord-001207-yjaiybwf	69	6	started	start	VBD
cord-001207-yjaiybwf	69	7	at	at	IN
cord-001207-yjaiybwf	69	8	12	12	CD
cord-001207-yjaiybwf	69	9	days	day	NNS
cord-001207-yjaiybwf	69	10	of	of	IN
cord-001207-yjaiybwf	69	11	age	age	NN
cord-001207-yjaiybwf	69	12	with	with	IN
cord-001207-yjaiybwf	69	13	a	a	DT
cord-001207-yjaiybwf	69	14	non	non	JJ
cord-001207-yjaiybwf	69	15	-	-	JJ
cord-001207-yjaiybwf	69	16	medicated	medicated	JJ
cord-001207-yjaiybwf	69	17	non	non	JJ
cord-001207-yjaiybwf	69	18	-	-	JJ
cord-001207-yjaiybwf	69	19	commercial	commercial	JJ
cord-001207-yjaiybwf	69	20	pre	pre	JJ
cord-001207-yjaiybwf	69	21	-	-	JJ
cord-001207-yjaiybwf	69	22	starter	starter	JJ
cord-001207-yjaiybwf	69	23	diet	diet	NN
cord-001207-yjaiybwf	69	24	[	[	-LRB-
cord-001207-yjaiybwf	69	25	36	36	CD
cord-001207-yjaiybwf	69	26	]	]	-RRB-
cord-001207-yjaiybwf	69	27	.	.	.
cord-001207-yjaiybwf	70	1	After	after	IN
cord-001207-yjaiybwf	70	2	weaning	wean	VBG
cord-001207-yjaiybwf	70	3	at	at	IN
cord-001207-yjaiybwf	70	4	28	28	CD
cord-001207-yjaiybwf	70	5	days	day	NNS
cord-001207-yjaiybwf	70	6	of	of	IN
cord-001207-yjaiybwf	70	7	age	age	NN
cord-001207-yjaiybwf	70	8	,	,	,
cord-001207-yjaiybwf	70	9	they	-PRON-	PRP
cord-001207-yjaiybwf	70	10	were	be	VBD
cord-001207-yjaiybwf	70	11	fed	feed	VBN
cord-001207-yjaiybwf	70	12	with	with	IN
cord-001207-yjaiybwf	70	13	a	a	DT
cord-001207-yjaiybwf	70	14	non	non	JJ
cord-001207-yjaiybwf	70	15	-	-	JJ
cord-001207-yjaiybwf	70	16	commercial	commercial	JJ
cord-001207-yjaiybwf	70	17	mash	mash	NN
cord-001207-yjaiybwf	70	18	starter	starter	NN
cord-001207-yjaiybwf	70	19	diet	diet	NN
cord-001207-yjaiybwf	70	20	[	[	-LRB-
cord-001207-yjaiybwf	70	21	37	37	CD
cord-001207-yjaiybwf	70	22	]	]	-RRB-
cord-001207-yjaiybwf	70	23	.	.	.
cord-001207-yjaiybwf	71	1	The	the	DT
cord-001207-yjaiybwf	71	2	homogenous	homogenous	JJ
cord-001207-yjaiybwf	71	3	distribution	distribution	NN
cord-001207-yjaiybwf	71	4	of	of	IN
cord-001207-yjaiybwf	71	5	the	the	DT
cord-001207-yjaiybwf	71	6	probiotic	probiotic	NN
cord-001207-yjaiybwf	71	7	in	in	IN
cord-001207-yjaiybwf	71	8	feed	feed	NN
cord-001207-yjaiybwf	71	9	has	have	VBZ
cord-001207-yjaiybwf	71	10	been	be	VBN
cord-001207-yjaiybwf	71	11	previously	previously	RB
cord-001207-yjaiybwf	71	12	demonstrated	demonstrate	VBN
cord-001207-yjaiybwf	71	13	by	by	IN
cord-001207-yjaiybwf	71	14	a	a	DT
cord-001207-yjaiybwf	71	15	colony	colony	NN
cord-001207-yjaiybwf	71	16	hybridization	hybridization	NN
cord-001207-yjaiybwf	71	17	assay	assay	NN
cord-001207-yjaiybwf	71	18	[	[	-LRB-
cord-001207-yjaiybwf	71	19	37	37	CD
cord-001207-yjaiybwf	71	20	]	]	-RRB-
cord-001207-yjaiybwf	71	21	.	.	.
cord-001207-yjaiybwf	72	1	The	the	DT
cord-001207-yjaiybwf	72	2	faeces	faece	NNS
cord-001207-yjaiybwf	72	3	of	of	IN
cord-001207-yjaiybwf	72	4	6	6	CD
cord-001207-yjaiybwf	72	5	sows	sow	NNS
cord-001207-yjaiybwf	72	6	of	of	IN
cord-001207-yjaiybwf	72	7	each	each	DT
cord-001207-yjaiybwf	72	8	group	group	NN
cord-001207-yjaiybwf	72	9	were	be	VBD
cord-001207-yjaiybwf	72	10	sampled	sample	VBN
cord-001207-yjaiybwf	72	11	at	at	IN
cord-001207-yjaiybwf	72	12	day	day	NN
cord-001207-yjaiybwf	72	13	28	28	CD
cord-001207-yjaiybwf	72	14	ante	ante	NN
cord-001207-yjaiybwf	72	15	partum	partum	NNP
cord-001207-yjaiybwf	72	16	(	(	-LRB-
cord-001207-yjaiybwf	72	17	before	before	IN
cord-001207-yjaiybwf	72	18	E.	E.	NNP
cord-001207-yjaiybwf	72	19	faecium	faecium	NN
cord-001207-yjaiybwf	72	20	diet	diet	NN
cord-001207-yjaiybwf	72	21	)	)	-RRB-
cord-001207-yjaiybwf	72	22	and	and	CC
cord-001207-yjaiybwf	72	23	at	at	IN
cord-001207-yjaiybwf	72	24	day	day	NN
cord-001207-yjaiybwf	72	25	14	14	CD
cord-001207-yjaiybwf	72	26	post	post	NN
cord-001207-yjaiybwf	72	27	partum	partum	NN
cord-001207-yjaiybwf	72	28	.	.	.
cord-001207-yjaiybwf	73	1	Faeces	faece	NNS
cord-001207-yjaiybwf	73	2	of	of	IN
cord-001207-yjaiybwf	73	3	their	-PRON-	PRP$
cord-001207-yjaiybwf	73	4	piglets	piglet	NNS
cord-001207-yjaiybwf	73	5	(	(	-LRB-
cord-001207-yjaiybwf	73	6	6	6	CD
cord-001207-yjaiybwf	73	7	from	from	IN
cord-001207-yjaiybwf	73	8	each	each	DT
cord-001207-yjaiybwf	73	9	group	group	NN
cord-001207-yjaiybwf	73	10	)	)	-RRB-
cord-001207-yjaiybwf	73	11	were	be	VBD
cord-001207-yjaiybwf	73	12	collected	collect	VBN
cord-001207-yjaiybwf	73	13	at	at	IN
cord-001207-yjaiybwf	73	14	day	day	NN
cord-001207-yjaiybwf	73	15	12	12	CD
cord-001207-yjaiybwf	73	16	and	and	CC
cord-001207-yjaiybwf	73	17	at	at	IN
cord-001207-yjaiybwf	73	18	day	day	NN
cord-001207-yjaiybwf	73	19	54	54	CD
cord-001207-yjaiybwf	73	20	of	of	IN
cord-001207-yjaiybwf	73	21	age	age	NN
cord-001207-yjaiybwf	73	22	(	(	-LRB-
cord-001207-yjaiybwf	73	23	end	end	NN
cord-001207-yjaiybwf	73	24	of	of	IN
cord-001207-yjaiybwf	73	25	the	the	DT
cord-001207-yjaiybwf	73	26	experiment	experiment	NN
cord-001207-yjaiybwf	73	27	)	)	-RRB-
cord-001207-yjaiybwf	73	28	.	.	.
cord-001207-yjaiybwf	74	1	Piglets	piglet	NNS
cord-001207-yjaiybwf	74	2	were	be	VBD
cord-001207-yjaiybwf	74	3	euthanized	euthanize	VBN
cord-001207-yjaiybwf	74	4	at	at	IN
cord-001207-yjaiybwf	74	5	the	the	DT
cord-001207-yjaiybwf	74	6	end	end	NN
cord-001207-yjaiybwf	74	7	of	of	IN
cord-001207-yjaiybwf	74	8	the	the	DT
cord-001207-yjaiybwf	74	9	experiment	experiment	NN
cord-001207-yjaiybwf	74	10	by	by	IN
cord-001207-yjaiybwf	74	11	intracardial	intracardial	JJ
cord-001207-yjaiybwf	74	12	injection	injection	NN
cord-001207-yjaiybwf	74	13	of	of	IN
cord-001207-yjaiybwf	74	14	a	a	DT
cord-001207-yjaiybwf	74	15	lethal	lethal	JJ
cord-001207-yjaiybwf	74	16	dose	dose	NN
cord-001207-yjaiybwf	74	17	of	of	IN
cord-001207-yjaiybwf	74	18	tetracaine	tetracaine	NN
cord-001207-yjaiybwf	74	19	hydrochloride	hydrochloride	NN
cord-001207-yjaiybwf	74	20	,	,	,
cord-001207-yjaiybwf	74	21	mebezonium	mebezonium	NN
cord-001207-yjaiybwf	74	22	iodide	iodide	NN
cord-001207-yjaiybwf	74	23	and	and	CC
cord-001207-yjaiybwf	74	24	embutramide	embutramide	NNP
cord-001207-yjaiybwf	74	25	(	(	-LRB-
cord-001207-yjaiybwf	74	26	T61	T61	NNP
cord-001207-yjaiybwf	74	27	,	,	,
cord-001207-yjaiybwf	74	28	Intervet	Intervet	NNP
cord-001207-yjaiybwf	74	29	,	,	,
cord-001207-yjaiybwf	74	30	Unterschleißheim	Unterschleißheim	NNP
cord-001207-yjaiybwf	74	31	,	,	,
cord-001207-yjaiybwf	74	32	Germany	Germany	NNP
cord-001207-yjaiybwf	74	33	)	)	-RRB-
cord-001207-yjaiybwf	74	34	.	.	.
cord-001207-yjaiybwf	75	1	Although	although	IN
cord-001207-yjaiybwf	75	2	the	the	DT
cord-001207-yjaiybwf	75	3	whole	whole	JJ
cord-001207-yjaiybwf	75	4	experiment	experiment	NN
cord-001207-yjaiybwf	75	5	included	include	VBD
cord-001207-yjaiybwf	75	6	a	a	DT
cord-001207-yjaiybwf	75	7	larger	large	JJR
cord-001207-yjaiybwf	75	8	number	number	NN
cord-001207-yjaiybwf	75	9	of	of	IN
cord-001207-yjaiybwf	75	10	animals	animal	NNS
cord-001207-yjaiybwf	75	11	[	[	-LRB-
cord-001207-yjaiybwf	75	12	30	30	CD
cord-001207-yjaiybwf	75	13	,	,	,
cord-001207-yjaiybwf	75	14	37	37	CD
cord-001207-yjaiybwf	75	15	]	]	-RRB-
cord-001207-yjaiybwf	75	16	,	,	,
cord-001207-yjaiybwf	75	17	only	only	RB
cord-001207-yjaiybwf	75	18	faeces	faece	NNS
cord-001207-yjaiybwf	75	19	of	of	IN
cord-001207-yjaiybwf	75	20	piglets	piglet	NNS
cord-001207-yjaiybwf	75	21	were	be	VBD
cord-001207-yjaiybwf	75	22	analyzed	analyze	VBN
cord-001207-yjaiybwf	75	23	,	,	,
cord-001207-yjaiybwf	75	24	for	for	IN
cord-001207-yjaiybwf	75	25	which	which	WDT
cord-001207-yjaiybwf	75	26	the	the	DT
cord-001207-yjaiybwf	75	27	faeces	faece	NNS
cord-001207-yjaiybwf	75	28	of	of	IN
cord-001207-yjaiybwf	75	29	their	-PRON-	PRP$
cord-001207-yjaiybwf	75	30	mother	mother	NN
cord-001207-yjaiybwf	75	31	sows	sow	NNS
cord-001207-yjaiybwf	75	32	had	have	VBD
cord-001207-yjaiybwf	75	33	also	also	RB
cord-001207-yjaiybwf	75	34	been	be	VBN
cord-001207-yjaiybwf	75	35	analysed	analyse	VBN
cord-001207-yjaiybwf	75	36	.	.	.
cord-001207-yjaiybwf	76	1	The	the	DT
cord-001207-yjaiybwf	76	2	faeces	faece	NNS
cord-001207-yjaiybwf	76	3	of	of	IN
cord-001207-yjaiybwf	76	4	each	each	DT
cord-001207-yjaiybwf	76	5	group	group	NN
cord-001207-yjaiybwf	76	6	and	and	CC
cord-001207-yjaiybwf	76	7	time	time	NN
cord-001207-yjaiybwf	76	8	-	-	HYPH
cord-001207-yjaiybwf	76	9	point	point	NN
cord-001207-yjaiybwf	76	10	were	be	VBD
cord-001207-yjaiybwf	76	11	pooled	pool	VBN
cord-001207-yjaiybwf	76	12	.	.	.
cord-001207-yjaiybwf	77	1	The	the	DT
cord-001207-yjaiybwf	77	2	samples	sample	NNS
cord-001207-yjaiybwf	77	3	were	be	VBD
cord-001207-yjaiybwf	77	4	stored	store	VBN
cord-001207-yjaiybwf	77	5	at	at	IN
cord-001207-yjaiybwf	77	6	220uC	220uc	NN
cord-001207-yjaiybwf	77	7	until	until	IN
cord-001207-yjaiybwf	77	8	analysis	analysis	NN
cord-001207-yjaiybwf	77	9	.	.	.
cord-001207-yjaiybwf	78	1	DNA	DNA	NNP
cord-001207-yjaiybwf	78	2	was	be	VBD
cord-001207-yjaiybwf	78	3	extracted	extract	VBN
cord-001207-yjaiybwf	78	4	from	from	IN
cord-001207-yjaiybwf	78	5	faecal	faecal	JJ
cord-001207-yjaiybwf	78	6	samples	sample	NNS
cord-001207-yjaiybwf	78	7	and	and	CC
cord-001207-yjaiybwf	78	8	subsequently	subsequently	RB
cord-001207-yjaiybwf	78	9	analyzed	analyze	VBN
cord-001207-yjaiybwf	78	10	by	by	IN
cord-001207-yjaiybwf	78	11	real	real	JJ
cord-001207-yjaiybwf	78	12	-	-	HYPH
cord-001207-yjaiybwf	78	13	time	time	NN
cord-001207-yjaiybwf	78	14	PCR	pcr	NN
cord-001207-yjaiybwf	78	15	specific	specific	JJ
cord-001207-yjaiybwf	78	16	for	for	IN
cord-001207-yjaiybwf	78	17	E.	E.	NNP
cord-001207-yjaiybwf	78	18	faecium	faecium	NN
cord-001207-yjaiybwf	78	19	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	78	20	10415	10415	CD
cord-001207-yjaiybwf	78	21	as	as	IN
cord-001207-yjaiybwf	78	22	previously	previously	RB
cord-001207-yjaiybwf	78	23	described	describe	VBN
cord-001207-yjaiybwf	78	24	[	[	-LRB-
cord-001207-yjaiybwf	78	25	38	38	CD
cord-001207-yjaiybwf	78	26	]	]	-RRB-
cord-001207-yjaiybwf	78	27	.	.	.
cord-001207-yjaiybwf	79	1	The	the	DT
cord-001207-yjaiybwf	79	2	standards	standard	NNS
cord-001207-yjaiybwf	79	3	used	use	VBN
cord-001207-yjaiybwf	79	4	for	for	IN
cord-001207-yjaiybwf	79	5	quantification	quantification	NN
cord-001207-yjaiybwf	79	6	were	be	VBD
cord-001207-yjaiybwf	79	7	prepared	prepare	VBN
cord-001207-yjaiybwf	79	8	from	from	IN
cord-001207-yjaiybwf	79	9	negative	negative	JJ
cord-001207-yjaiybwf	79	10	pig	pig	NN
cord-001207-yjaiybwf	79	11	faecal	faecal	JJ
cord-001207-yjaiybwf	79	12	samples	sample	NNS
cord-001207-yjaiybwf	79	13	spiked	spike	VBN
cord-001207-yjaiybwf	79	14	with	with	IN
cord-001207-yjaiybwf	79	15	known	know	VBN
cord-001207-yjaiybwf	79	16	amounts	amount	NNS
cord-001207-yjaiybwf	79	17	of	of	IN
cord-001207-yjaiybwf	79	18	cultured	cultured	JJ
cord-001207-yjaiybwf	79	19	E.	E.	NNP
cord-001207-yjaiybwf	79	20	faecium	faecium	NN
cord-001207-yjaiybwf	79	21	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	79	22	10415	10415	CD
cord-001207-yjaiybwf	79	23	cells	cell	NNS
cord-001207-yjaiybwf	79	24	as	as	IN
cord-001207-yjaiybwf	79	25	described	describe	VBN
cord-001207-yjaiybwf	79	26	by	by	IN
cord-001207-yjaiybwf	79	27	Starke	Starke	NNP
cord-001207-yjaiybwf	79	28	et	et	NNP
cord-001207-yjaiybwf	79	29	al	al	NNP
cord-001207-yjaiybwf	79	30	.	.	.
cord-001207-yjaiybwf	80	1	[	[	-LRB-
cord-001207-yjaiybwf	80	2	37	37	CD
cord-001207-yjaiybwf	80	3	]	]	-RRB-
cord-001207-yjaiybwf	80	4	Results	result	NNS
cord-001207-yjaiybwf	80	5	are	be	VBP
cord-001207-yjaiybwf	80	6	expressed	express	VBN
cord-001207-yjaiybwf	80	7	as	as	IN
cord-001207-yjaiybwf	80	8	log	log	NN
cord-001207-yjaiybwf	80	9	of	of	IN
cord-001207-yjaiybwf	80	10	cell	cell	NN
cord-001207-yjaiybwf	80	11	numbers	number	NNS
cord-001207-yjaiybwf	80	12	per	per	IN
cord-001207-yjaiybwf	80	13	g	g	NN
cord-001207-yjaiybwf	80	14	faeces	faece	NNS
cord-001207-yjaiybwf	80	15	.	.	.
cord-001207-yjaiybwf	81	1	Three	three	CD
cord-001207-yjaiybwf	81	2	different	different	JJ
cord-001207-yjaiybwf	81	3	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	81	4	(	(	-LRB-
cord-001207-yjaiybwf	81	5	M13	M13	NNP
cord-001207-yjaiybwf	81	6	,	,	,
cord-001207-yjaiybwf	81	7	MS2	MS2	NNP
cord-001207-yjaiybwf	81	8	,	,	,
cord-001207-yjaiybwf	81	9	T4	T4	NNP
cord-001207-yjaiybwf	81	10	)	)	-RRB-
cord-001207-yjaiybwf	81	11	were	be	VBD
cord-001207-yjaiybwf	81	12	grown	grow	VBN
cord-001207-yjaiybwf	81	13	,	,	,
cord-001207-yjaiybwf	81	14	titrated	titrate	VBN
cord-001207-yjaiybwf	81	15	and	and	CC
cord-001207-yjaiybwf	81	16	used	use	VBN
cord-001207-yjaiybwf	81	17	as	as	IN
cord-001207-yjaiybwf	81	18	process	process	NN
cord-001207-yjaiybwf	81	19	controls	control	NNS
cord-001207-yjaiybwf	81	20	for	for	IN
cord-001207-yjaiybwf	81	21	monitoring	monitor	VBG
cord-001207-yjaiybwf	81	22	the	the	DT
cord-001207-yjaiybwf	81	23	efficiency	efficiency	NN
cord-001207-yjaiybwf	81	24	of	of	IN
cord-001207-yjaiybwf	81	25	the	the	DT
cord-001207-yjaiybwf	81	26	virome	virome	NNP
cord-001207-yjaiybwf	81	27	analysis	analysis	NN
cord-001207-yjaiybwf	81	28	procedure	procedure	NN
cord-001207-yjaiybwf	81	29	as	as	IN
cord-001207-yjaiybwf	81	30	described	describe	VBN
cord-001207-yjaiybwf	81	31	previously	previously	RB
cord-001207-yjaiybwf	81	32	[	[	-LRB-
cord-001207-yjaiybwf	81	33	10	10	CD
cord-001207-yjaiybwf	81	34	]	]	-RRB-
cord-001207-yjaiybwf	81	35	.	.	.
cord-001207-yjaiybwf	82	1	A	a	DT
cord-001207-yjaiybwf	82	2	total	total	NN
cord-001207-yjaiybwf	82	3	of	of	IN
cord-001207-yjaiybwf	82	4	10	10	CD
cord-001207-yjaiybwf	82	5	ml	ml	NNS
cord-001207-yjaiybwf	82	6	of	of	IN
cord-001207-yjaiybwf	82	7	the	the	DT
cord-001207-yjaiybwf	82	8	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	82	9	mixture	mixture	NN
cord-001207-yjaiybwf	82	10	containing	contain	VBG
cord-001207-yjaiybwf	82	11	approximately	approximately	RB
cord-001207-yjaiybwf	82	12	10	10	CD
cord-001207-yjaiybwf	82	13	5	5	CD
cord-001207-yjaiybwf	82	14	plaque	plaque	NN
cord-001207-yjaiybwf	82	15	-	-	HYPH
cord-001207-yjaiybwf	82	16	forming	form	VBG
cord-001207-yjaiybwf	82	17	units	unit	NNS
cord-001207-yjaiybwf	82	18	of	of	IN
cord-001207-yjaiybwf	82	19	each	each	DT
cord-001207-yjaiybwf	82	20	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	82	21	was	be	VBD
cord-001207-yjaiybwf	82	22	added	add	VBN
cord-001207-yjaiybwf	82	23	per	per	IN
cord-001207-yjaiybwf	82	24	1	1	CD
cord-001207-yjaiybwf	82	25	g	g	NN
cord-001207-yjaiybwf	82	26	faeces	faece	NNS
cord-001207-yjaiybwf	82	27	.	.	.
cord-001207-yjaiybwf	83	1	Virus	virus	NN
cord-001207-yjaiybwf	83	2	particles	particle	NNS
cord-001207-yjaiybwf	83	3	were	be	VBD
cord-001207-yjaiybwf	83	4	purified	purify	VBN
cord-001207-yjaiybwf	83	5	from	from	IN
cord-001207-yjaiybwf	83	6	the	the	DT
cord-001207-yjaiybwf	83	7	faecal	faecal	JJ
cord-001207-yjaiybwf	83	8	samples	sample	NNS
cord-001207-yjaiybwf	83	9	by	by	IN
cord-001207-yjaiybwf	83	10	a	a	DT
cord-001207-yjaiybwf	83	11	combination	combination	NN
cord-001207-yjaiybwf	83	12	of	of	IN
cord-001207-yjaiybwf	83	13	tangential	tangential	JJ
cord-001207-yjaiybwf	83	14	flow	flow	NN
cord-001207-yjaiybwf	83	15	filtration	filtration	NN
cord-001207-yjaiybwf	83	16	(	(	-LRB-
cord-001207-yjaiybwf	83	17	TFF	TFF	NNP
cord-001207-yjaiybwf	83	18	)	)	-RRB-
cord-001207-yjaiybwf	83	19	and	and	CC
cord-001207-yjaiybwf	83	20	caesium	caesium	NN
cord-001207-yjaiybwf	83	21	chloride	chloride	NN
cord-001207-yjaiybwf	83	22	(	(	-LRB-
cord-001207-yjaiybwf	83	23	CsCl	CsCl	NNP
cord-001207-yjaiybwf	83	24	)	)	-RRB-
cord-001207-yjaiybwf	83	25	density	density	NN
cord-001207-yjaiybwf	83	26	gradient	gradient	NN
cord-001207-yjaiybwf	83	27	ultracentrifugation	ultracentrifugation	NN
cord-001207-yjaiybwf	83	28	,	,	,
cord-001207-yjaiybwf	83	29	and	and	CC
cord-001207-yjaiybwf	83	30	concentrated	concentrate	VBN
cord-001207-yjaiybwf	83	31	by	by	IN
cord-001207-yjaiybwf	83	32	centrifugal	centrifugal	JJ
cord-001207-yjaiybwf	83	33	filtration	filtration	NN
cord-001207-yjaiybwf	83	34	and	and	CC
cord-001207-yjaiybwf	83	35	TFF	TFF	NNP
cord-001207-yjaiybwf	83	36	as	as	IN
cord-001207-yjaiybwf	83	37	described	describe	VBN
cord-001207-yjaiybwf	83	38	[	[	-LRB-
cord-001207-yjaiybwf	83	39	10	10	CD
cord-001207-yjaiybwf	83	40	,	,	,
cord-001207-yjaiybwf	83	41	39	39	CD
cord-001207-yjaiybwf	83	42	]	]	-RRB-
cord-001207-yjaiybwf	83	43	.	.	.
cord-001207-yjaiybwf	84	1	A	a	DT
cord-001207-yjaiybwf	84	2	total	total	NN
cord-001207-yjaiybwf	84	3	of	of	IN
cord-001207-yjaiybwf	84	4	17	17	CD
cord-001207-yjaiybwf	84	5	g	g	NN
cord-001207-yjaiybwf	84	6	of	of	IN
cord-001207-yjaiybwf	84	7	pooled	pool	VBN
cord-001207-yjaiybwf	84	8	faecal	faecal	JJ
cord-001207-yjaiybwf	84	9	samples	sample	NNS
cord-001207-yjaiybwf	84	10	from	from	IN
cord-001207-yjaiybwf	84	11	the	the	DT
cord-001207-yjaiybwf	84	12	sows	sow	NNS
cord-001207-yjaiybwf	84	13	were	be	VBD
cord-001207-yjaiybwf	84	14	used	use	VBN
cord-001207-yjaiybwf	84	15	.	.	.
cord-001207-yjaiybwf	85	1	Due	due	IN
cord-001207-yjaiybwf	85	2	to	to	IN
cord-001207-yjaiybwf	85	3	limited	limited	JJ
cord-001207-yjaiybwf	85	4	availability	availability	NN
cord-001207-yjaiybwf	85	5	of	of	IN
cord-001207-yjaiybwf	85	6	faeces	faece	NNS
cord-001207-yjaiybwf	85	7	in	in	IN
cord-001207-yjaiybwf	85	8	the	the	DT
cord-001207-yjaiybwf	85	9	youngest	young	JJS
cord-001207-yjaiybwf	85	10	age	age	NN
cord-001207-yjaiybwf	85	11	group	group	NN
cord-001207-yjaiybwf	85	12	,	,	,
cord-001207-yjaiybwf	85	13	1.7	1.7	CD
cord-001207-yjaiybwf	85	14	g	g	NN
cord-001207-yjaiybwf	85	15	of	of	IN
cord-001207-yjaiybwf	85	16	the	the	DT
cord-001207-yjaiybwf	85	17	pooled	pool	VBN
cord-001207-yjaiybwf	85	18	faecal	faecal	JJ
cord-001207-yjaiybwf	85	19	samples	sample	NNS
cord-001207-yjaiybwf	85	20	from	from	IN
cord-001207-yjaiybwf	85	21	the	the	DT
cord-001207-yjaiybwf	85	22	piglets	piglet	NNS
cord-001207-yjaiybwf	85	23	was	be	VBD
cord-001207-yjaiybwf	85	24	used	use	VBN
cord-001207-yjaiybwf	85	25	.	.	.
cord-001207-yjaiybwf	86	1	The	the	DT
cord-001207-yjaiybwf	86	2	samples	sample	NNS
cord-001207-yjaiybwf	86	3	were	be	VBD
cord-001207-yjaiybwf	86	4	spiked	spike	VBN
cord-001207-yjaiybwf	86	5	with	with	IN
cord-001207-yjaiybwf	86	6	test	test	NN
cord-001207-yjaiybwf	86	7	-	-	HYPH
cord-001207-yjaiybwf	86	8	phages	phage	NNS
cord-001207-yjaiybwf	86	9	and	and	CC
cord-001207-yjaiybwf	86	10	resuspended	resuspended	JJ
cord-001207-yjaiybwf	86	11	1:10	1:10	CD
cord-001207-yjaiybwf	86	12	in	in	IN
cord-001207-yjaiybwf	86	13	SMbuffer	SMbuffer	NNP
cord-001207-yjaiybwf	86	14	(	(	-LRB-
cord-001207-yjaiybwf	86	15	100	100	CD
cord-001207-yjaiybwf	86	16	mM	mm	CD
cord-001207-yjaiybwf	86	17	NaCl	nacl	NN
cord-001207-yjaiybwf	86	18	,	,	,
cord-001207-yjaiybwf	87	1	8	8	CD
cord-001207-yjaiybwf	87	2	mM	mm	CD
cord-001207-yjaiybwf	87	3	MgSO	MgSO	NNP
cord-001207-yjaiybwf	87	4	4	4	CD
cord-001207-yjaiybwf	87	5	,	,	,
cord-001207-yjaiybwf	87	6	50	50	CD
cord-001207-yjaiybwf	87	7	mM	mm	CD
cord-001207-yjaiybwf	87	8	Tris	Tris	NNP
cord-001207-yjaiybwf	87	9	-	-	HYPH
cord-001207-yjaiybwf	87	10	HCl	HCl	NNP
cord-001207-yjaiybwf	87	11	pH	pH	NNP
cord-001207-yjaiybwf	87	12	7.5	7.5	CD
cord-001207-yjaiybwf	87	13	)	)	-RRB-
cord-001207-yjaiybwf	87	14	by	by	IN
cord-001207-yjaiybwf	87	15	magnetic	magnetic	JJ
cord-001207-yjaiybwf	87	16	stirring	stirring	NN
cord-001207-yjaiybwf	87	17	.	.	.
cord-001207-yjaiybwf	88	1	The	the	DT
cord-001207-yjaiybwf	88	2	sample	sample	NN
cord-001207-yjaiybwf	88	3	was	be	VBD
cord-001207-yjaiybwf	88	4	centrifuged	centrifuge	VBN
cord-001207-yjaiybwf	88	5	at	at	IN
cord-001207-yjaiybwf	88	6	10,000	10,000	CD
cord-001207-yjaiybwf	88	7	g	g	NN
cord-001207-yjaiybwf	88	8	for	for	IN
cord-001207-yjaiybwf	88	9	30	30	CD
cord-001207-yjaiybwf	88	10	min	min	NN
cord-001207-yjaiybwf	88	11	in	in	IN
cord-001207-yjaiybwf	88	12	order	order	NN
cord-001207-yjaiybwf	88	13	to	to	TO
cord-001207-yjaiybwf	88	14	remove	remove	VB
cord-001207-yjaiybwf	88	15	the	the	DT
cord-001207-yjaiybwf	88	16	large	large	JJ
cord-001207-yjaiybwf	88	17	particulate	particulate	NN
cord-001207-yjaiybwf	88	18	debris	debris	NN
cord-001207-yjaiybwf	88	19	and	and	CC
cord-001207-yjaiybwf	88	20	the	the	DT
cord-001207-yjaiybwf	88	21	supernatant	supernatant	NN
cord-001207-yjaiybwf	88	22	was	be	VBD
cord-001207-yjaiybwf	88	23	collected	collect	VBN
cord-001207-yjaiybwf	88	24	.	.	.
cord-001207-yjaiybwf	89	1	The	the	DT
cord-001207-yjaiybwf	89	2	procedure	procedure	NN
cord-001207-yjaiybwf	89	3	was	be	VBD
cord-001207-yjaiybwf	89	4	repeated	repeat	VBN
cord-001207-yjaiybwf	89	5	by	by	IN
cord-001207-yjaiybwf	89	6	centrifugation	centrifugation	NN
cord-001207-yjaiybwf	89	7	for	for	IN
cord-001207-yjaiybwf	89	8	3	3	CD
cord-001207-yjaiybwf	89	9	hours	hour	NNS
cord-001207-yjaiybwf	89	10	at	at	IN
cord-001207-yjaiybwf	89	11	10,000	10,000	CD
cord-001207-yjaiybwf	89	12	g	g	NN
cord-001207-yjaiybwf	89	13	to	to	TO
cord-001207-yjaiybwf	89	14	remove	remove	VB
cord-001207-yjaiybwf	89	15	smaller	small	JJR
cord-001207-yjaiybwf	89	16	particular	particular	JJ
cord-001207-yjaiybwf	89	17	structures	structure	NNS
cord-001207-yjaiybwf	89	18	.	.	.
cord-001207-yjaiybwf	90	1	Afterwards	afterwards	RB
cord-001207-yjaiybwf	90	2	,	,	,
cord-001207-yjaiybwf	90	3	a	a	DT
cord-001207-yjaiybwf	90	4	first	first	JJ
cord-001207-yjaiybwf	90	5	TFF	TFF	NNP
cord-001207-yjaiybwf	90	6	was	be	VBD
cord-001207-yjaiybwf	90	7	performed	perform	VBN
cord-001207-yjaiybwf	90	8	using	use	VBG
cord-001207-yjaiybwf	90	9	a	a	DT
cord-001207-yjaiybwf	90	10	0.22	0.22	CD
cord-001207-yjaiybwf	90	11	mm	mm	NN
cord-001207-yjaiybwf	90	12	filter	filter	NN
cord-001207-yjaiybwf	90	13	(	(	-LRB-
cord-001207-yjaiybwf	90	14	PALL	PALL	NNP
cord-001207-yjaiybwf	90	15	Corporation	Corporation	NNP
cord-001207-yjaiybwf	90	16	,	,	,
cord-001207-yjaiybwf	90	17	Middleton	Middleton	NNP
cord-001207-yjaiybwf	90	18	;	;	:
cord-001207-yjaiybwf	90	19	MA	MA	NNP
cord-001207-yjaiybwf	90	20	,	,	,
cord-001207-yjaiybwf	90	21	USA	USA	NNP
cord-001207-yjaiybwf	90	22	)	)	-RRB-
cord-001207-yjaiybwf	90	23	to	to	TO
cord-001207-yjaiybwf	90	24	remove	remove	VB
cord-001207-yjaiybwf	90	25	bacterial	bacterial	JJ
cord-001207-yjaiybwf	90	26	and	and	CC
cord-001207-yjaiybwf	90	27	eukaryotic	eukaryotic	JJ
cord-001207-yjaiybwf	90	28	cells	cell	NNS
cord-001207-yjaiybwf	90	29	and	and	CC
cord-001207-yjaiybwf	90	30	debris	debris	NN
cord-001207-yjaiybwf	90	31	.	.	.
cord-001207-yjaiybwf	91	1	The	the	DT
cord-001207-yjaiybwf	91	2	remaining	remain	VBG
cord-001207-yjaiybwf	91	3	filtrate	filtrate	NN
cord-001207-yjaiybwf	91	4	was	be	VBD
cord-001207-yjaiybwf	91	5	subjected	subject	VBN
cord-001207-yjaiybwf	91	6	to	to	IN
cord-001207-yjaiybwf	91	7	a	a	DT
cord-001207-yjaiybwf	91	8	second	second	JJ
cord-001207-yjaiybwf	91	9	TFF	tff	NN
cord-001207-yjaiybwf	91	10	with	with	IN
cord-001207-yjaiybwf	91	11	a	a	DT
cord-001207-yjaiybwf	91	12	50	50	CD
cord-001207-yjaiybwf	91	13	kDa	kDa	NNS
cord-001207-yjaiybwf	91	14	filter	filter	NN
cord-001207-yjaiybwf	91	15	(	(	-LRB-
cord-001207-yjaiybwf	91	16	PALL	PALL	NNP
cord-001207-yjaiybwf	91	17	Corporation	Corporation	NNP
cord-001207-yjaiybwf	91	18	,	,	,
cord-001207-yjaiybwf	91	19	Middleton	Middleton	NNP
cord-001207-yjaiybwf	91	20	;	;	:
cord-001207-yjaiybwf	91	21	MA	MA	NNP
cord-001207-yjaiybwf	91	22	,	,	,
cord-001207-yjaiybwf	91	23	USA	USA	NNP
cord-001207-yjaiybwf	91	24	)	)	-RRB-
cord-001207-yjaiybwf	91	25	in	in	IN
cord-001207-yjaiybwf	91	26	order	order	NN
cord-001207-yjaiybwf	91	27	to	to	TO
cord-001207-yjaiybwf	91	28	concentrate	concentrate	VB
cord-001207-yjaiybwf	91	29	the	the	DT
cord-001207-yjaiybwf	91	30	virus	virus	NN
cord-001207-yjaiybwf	91	31	particles	particle	NNS
cord-001207-yjaiybwf	91	32	.	.	.
cord-001207-yjaiybwf	92	1	The	the	DT
cord-001207-yjaiybwf	92	2	viral	viral	JJ
cord-001207-yjaiybwf	92	3	preparations	preparation	NNS
cord-001207-yjaiybwf	92	4	were	be	VBD
cord-001207-yjaiybwf	92	5	further	further	RB
cord-001207-yjaiybwf	92	6	concentrated	concentrate	VBN
cord-001207-yjaiybwf	92	7	by	by	IN
cord-001207-yjaiybwf	92	8	centrifugation	centrifugation	NN
cord-001207-yjaiybwf	92	9	through	through	IN
cord-001207-yjaiybwf	92	10	Vivaspin	Vivaspin	NNP
cord-001207-yjaiybwf	92	11	50,000	50,000	CD
cord-001207-yjaiybwf	92	12	MWCO	MWCO	NNP
cord-001207-yjaiybwf	92	13	concentrators	concentrator	NNS
cord-001207-yjaiybwf	92	14	(	(	-LRB-
cord-001207-yjaiybwf	92	15	Sartorius	Sartorius	NNP
cord-001207-yjaiybwf	92	16	Stedim	Stedim	NNP
cord-001207-yjaiybwf	92	17	Biotech	Biotech	NNP
cord-001207-yjaiybwf	92	18	GmbH	GmbH	NNP
cord-001207-yjaiybwf	92	19	,	,	,
cord-001207-yjaiybwf	92	20	Götting	Götting	NNP
cord-001207-yjaiybwf	92	21	,	,	,
cord-001207-yjaiybwf	92	22	Germany	Germany	NNP
cord-001207-yjaiybwf	92	23	)	)	-RRB-
cord-001207-yjaiybwf	92	24	at	at	IN
cord-001207-yjaiybwf	92	25	3,500	3,500	CD
cord-001207-yjaiybwf	92	26	g	g	NN
cord-001207-yjaiybwf	92	27	resulting	result	VBG
cord-001207-yjaiybwf	92	28	in	in	IN
cord-001207-yjaiybwf	92	29	a	a	DT
cord-001207-yjaiybwf	92	30	final	final	JJ
cord-001207-yjaiybwf	92	31	volume	volume	NN
cord-001207-yjaiybwf	92	32	of	of	IN
cord-001207-yjaiybwf	92	33	36	36	CD
cord-001207-yjaiybwf	92	34	ml	ml	NNS
cord-001207-yjaiybwf	92	35	.	.	.
cord-001207-yjaiybwf	93	1	The	the	DT
cord-001207-yjaiybwf	93	2	preparation	preparation	NN
cord-001207-yjaiybwf	93	3	was	be	VBD
cord-001207-yjaiybwf	93	4	divided	divide	VBN
cord-001207-yjaiybwf	93	5	into	into	IN
cord-001207-yjaiybwf	93	6	two	two	CD
cord-001207-yjaiybwf	93	7	fractions	fraction	NNS
cord-001207-yjaiybwf	93	8	of	of	IN
cord-001207-yjaiybwf	93	9	18	18	CD
cord-001207-yjaiybwf	93	10	ml	ml	NNS
cord-001207-yjaiybwf	93	11	,	,	,
cord-001207-yjaiybwf	93	12	which	which	WDT
cord-001207-yjaiybwf	93	13	were	be	VBD
cord-001207-yjaiybwf	93	14	added	add	VBN
cord-001207-yjaiybwf	93	15	separately	separately	RB
cord-001207-yjaiybwf	93	16	onto	onto	IN
cord-001207-yjaiybwf	93	17	preformed	preformed	JJ
cord-001207-yjaiybwf	93	18	stepwise	stepwise	JJ
cord-001207-yjaiybwf	93	19	caesium	caesium	NN
cord-001207-yjaiybwf	93	20	chloride	chloride	NN
cord-001207-yjaiybwf	93	21	(	(	-LRB-
cord-001207-yjaiybwf	93	22	CsCl	CsCl	NNP
cord-001207-yjaiybwf	93	23	)	)	-RRB-
cord-001207-yjaiybwf	93	24	density	density	NN
cord-001207-yjaiybwf	93	25	gradients	gradient	NNS
cord-001207-yjaiybwf	93	26	with	with	IN
cord-001207-yjaiybwf	93	27	density	density	NN
cord-001207-yjaiybwf	93	28	layers	layer	NNS
cord-001207-yjaiybwf	93	29	of	of	IN
cord-001207-yjaiybwf	93	30	1.7	1.7	CD
cord-001207-yjaiybwf	93	31	,	,	,
cord-001207-yjaiybwf	93	32	1.5	1.5	CD
cord-001207-yjaiybwf	93	33	,	,	,
cord-001207-yjaiybwf	93	34	1.35	1.35	CD
cord-001207-yjaiybwf	93	35	and	and	CC
cord-001207-yjaiybwf	93	36	1.2	1.2	CD
cord-001207-yjaiybwf	93	37	g	g	NN
cord-001207-yjaiybwf	93	38	/	/	SYM
cord-001207-yjaiybwf	93	39	ml	ml	NN
cord-001207-yjaiybwf	93	40	(	(	-LRB-
cord-001207-yjaiybwf	93	41	5	5	CD
cord-001207-yjaiybwf	93	42	ml	ml	NN
cord-001207-yjaiybwf	93	43	each	each	DT
cord-001207-yjaiybwf	93	44	)	)	-RRB-
cord-001207-yjaiybwf	93	45	and	and	CC
cord-001207-yjaiybwf	93	46	ultracentrifuged	ultracentrifuge	VBD
cord-001207-yjaiybwf	93	47	at	at	IN
cord-001207-yjaiybwf	93	48	20,000	20,000	CD
cord-001207-yjaiybwf	93	49	g	g	NN
cord-001207-yjaiybwf	93	50	for	for	IN
cord-001207-yjaiybwf	93	51	14	14	CD
cord-001207-yjaiybwf	93	52	hours	hour	NNS
cord-001207-yjaiybwf	93	53	at	at	IN
cord-001207-yjaiybwf	93	54	10uC.	10uc.	CD
cord-001207-yjaiybwf	94	1	The	the	DT
cord-001207-yjaiybwf	94	2	1.35	1.35	CD
cord-001207-yjaiybwf	94	3	-	-	SYM
cord-001207-yjaiybwf	94	4	1.5	1.5	CD
cord-001207-yjaiybwf	94	5	g	g	NN
cord-001207-yjaiybwf	94	6	/	/	SYM
cord-001207-yjaiybwf	94	7	ml	ml	NN
cord-001207-yjaiybwf	94	8	layers	layer	NNS
cord-001207-yjaiybwf	94	9	were	be	VBD
cord-001207-yjaiybwf	94	10	collected	collect	VBN
cord-001207-yjaiybwf	94	11	from	from	IN
cord-001207-yjaiybwf	94	12	the	the	DT
cord-001207-yjaiybwf	94	13	gradients	gradient	NNS
cord-001207-yjaiybwf	94	14	using	use	VBG
cord-001207-yjaiybwf	94	15	a	a	DT
cord-001207-yjaiybwf	94	16	syringe	syringe	NN
cord-001207-yjaiybwf	94	17	.	.	.
cord-001207-yjaiybwf	95	1	To	to	TO
cord-001207-yjaiybwf	95	2	eliminate	eliminate	VB
cord-001207-yjaiybwf	95	3	free	free	JJ
cord-001207-yjaiybwf	95	4	DNA	dna	NN
cord-001207-yjaiybwf	95	5	present	present	NN
cord-001207-yjaiybwf	95	6	in	in	IN
cord-001207-yjaiybwf	95	7	the	the	DT
cord-001207-yjaiybwf	95	8	virus	virus	NN
cord-001207-yjaiybwf	95	9	concentrate	concentrate	NN
cord-001207-yjaiybwf	95	10	,	,	,
cord-001207-yjaiybwf	95	11	an	an	DT
cord-001207-yjaiybwf	95	12	aliquot	aliquot	NN
cord-001207-yjaiybwf	95	13	of	of	IN
cord-001207-yjaiybwf	95	14	1	1	CD
cord-001207-yjaiybwf	95	15	mL	mL	NNP
cord-001207-yjaiybwf	95	16	CsCl	CsCl	NNP
cord-001207-yjaiybwf	95	17	purified	purify	VBN
cord-001207-yjaiybwf	95	18	virus	virus	NN
cord-001207-yjaiybwf	95	19	solution	solution	NN
cord-001207-yjaiybwf	95	20	was	be	VBD
cord-001207-yjaiybwf	95	21	treated	treat	VBN
cord-001207-yjaiybwf	95	22	with	with	IN
cord-001207-yjaiybwf	95	23	50	50	CD
cord-001207-yjaiybwf	95	24	units	unit	NNS
cord-001207-yjaiybwf	96	1	DNase	DNase	NNP
cord-001207-yjaiybwf	97	1	I	-PRON-	PRP
cord-001207-yjaiybwf	97	2	(	(	-LRB-
cord-001207-yjaiybwf	97	3	2,000	2,000	CD
cord-001207-yjaiybwf	97	4	U	U	NNP
cord-001207-yjaiybwf	97	5	/	/	SYM
cord-001207-yjaiybwf	97	6	mg	mg	NN
cord-001207-yjaiybwf	97	7	,	,	,
cord-001207-yjaiybwf	97	8	bovine	bovine	JJ
cord-001207-yjaiybwf	97	9	pancreas	pancreas	NN
cord-001207-yjaiybwf	97	10	grad	grad	NN
cord-001207-yjaiybwf	97	11	II	II	NNP
cord-001207-yjaiybwf	97	12	;	;	:
cord-001207-yjaiybwf	97	13	Roche	Roche	NNP
cord-001207-yjaiybwf	97	14	Diagnostics	Diagnostics	NNP
cord-001207-yjaiybwf	97	15	GmbH	GmbH	NNP
cord-001207-yjaiybwf	97	16	,	,	,
cord-001207-yjaiybwf	97	17	Mannheim	Mannheim	NNP
cord-001207-yjaiybwf	97	18	,	,	,
cord-001207-yjaiybwf	97	19	Germany	Germany	NNP
cord-001207-yjaiybwf	97	20	)	)	-RRB-
cord-001207-yjaiybwf	97	21	for	for	IN
cord-001207-yjaiybwf	97	22	45	45	CD
cord-001207-yjaiybwf	97	23	min	min	NN
cord-001207-yjaiybwf	97	24	at	at	IN
cord-001207-yjaiybwf	97	25	37uC	37uc	CD
cord-001207-yjaiybwf	97	26	,	,	,
cord-001207-yjaiybwf	97	27	followed	follow	VBN
cord-001207-yjaiybwf	97	28	by	by	IN
cord-001207-yjaiybwf	97	29	heat	heat	NN
cord-001207-yjaiybwf	97	30	inactivation	inactivation	NN
cord-001207-yjaiybwf	97	31	for	for	IN
cord-001207-yjaiybwf	97	32	10	10	CD
cord-001207-yjaiybwf	97	33	min	min	NN
cord-001207-yjaiybwf	97	34	at	at	IN
cord-001207-yjaiybwf	97	35	65uC.	65uc.	CD
cord-001207-yjaiybwf	98	1	Thereafter	thereafter	RB
cord-001207-yjaiybwf	98	2	,	,	,
cord-001207-yjaiybwf	98	3	DNA	DNA	NNP
cord-001207-yjaiybwf	98	4	and	and	CC
cord-001207-yjaiybwf	98	5	RNA	RNA	NNP
cord-001207-yjaiybwf	98	6	were	be	VBD
cord-001207-yjaiybwf	98	7	extracted	extract	VBN
cord-001207-yjaiybwf	98	8	simultaneously	simultaneously	RB
cord-001207-yjaiybwf	98	9	using	use	VBG
cord-001207-yjaiybwf	98	10	NucliSENS	NucliSENS	NNP
cord-001207-yjaiybwf	98	11	magnetic	magnetic	JJ
cord-001207-yjaiybwf	98	12	extraction	extraction	NN
cord-001207-yjaiybwf	98	13	(	(	-LRB-
cord-001207-yjaiybwf	98	14	bioMerieux	biomerieux	XX
cord-001207-yjaiybwf	98	15	,	,	,
cord-001207-yjaiybwf	98	16	Nürtingen	Nürtingen	NNP
cord-001207-yjaiybwf	98	17	,	,	,
cord-001207-yjaiybwf	98	18	Germany	Germany	NNP
cord-001207-yjaiybwf	98	19	)	)	-RRB-
cord-001207-yjaiybwf	98	20	.	.	.
cord-001207-yjaiybwf	99	1	The	the	DT
cord-001207-yjaiybwf	99	2	extracted	extract	VBN
cord-001207-yjaiybwf	99	3	nucleic	nucleic	JJ
cord-001207-yjaiybwf	99	4	acids	acid	NNS
cord-001207-yjaiybwf	99	5	(	(	-LRB-
cord-001207-yjaiybwf	99	6	75	75	CD
cord-001207-yjaiybwf	99	7	ng	ng	NN
cord-001207-yjaiybwf	99	8	per	per	IN
cord-001207-yjaiybwf	99	9	reaction	reaction	NN
cord-001207-yjaiybwf	99	10	)	)	-RRB-
cord-001207-yjaiybwf	99	11	were	be	VBD
cord-001207-yjaiybwf	99	12	randomly	randomly	RB
cord-001207-yjaiybwf	99	13	primed	prime	VBN
cord-001207-yjaiybwf	99	14	for	for	IN
cord-001207-yjaiybwf	99	15	cDNA	cdna	NN
cord-001207-yjaiybwf	99	16	synthesis	synthesis	NN
cord-001207-yjaiybwf	99	17	using	use	VBG
cord-001207-yjaiybwf	99	18	the	the	DT
cord-001207-yjaiybwf	99	19	TransPlexH	TransPlexH	NNP
cord-001207-yjaiybwf	99	20	Complete	complete	VB
cord-001207-yjaiybwf	99	21	Whole	Whole	NNP
cord-001207-yjaiybwf	99	22	Transcriptom	Transcriptom	NNP
cord-001207-yjaiybwf	99	23	Amplification	amplification	NN
cord-001207-yjaiybwf	99	24	Kit	kit	NN
cord-001207-yjaiybwf	99	25	(	(	-LRB-
cord-001207-yjaiybwf	99	26	WTA2	WTA2	NNP
cord-001207-yjaiybwf	99	27	,	,	,
cord-001207-yjaiybwf	99	28	Sigma	Sigma	NNP
cord-001207-yjaiybwf	99	29	-	-	HYPH
cord-001207-yjaiybwf	99	30	Aldrich	Aldrich	NNP
cord-001207-yjaiybwf	99	31	,	,	,
cord-001207-yjaiybwf	99	32	St.	St.	NNP
cord-001207-yjaiybwf	99	33	Louis	Louis	NNP
cord-001207-yjaiybwf	99	34	,	,	,
cord-001207-yjaiybwf	99	35	MO	MO	NNP
cord-001207-yjaiybwf	99	36	,	,	,
cord-001207-yjaiybwf	99	37	USA	USA	NNP
cord-001207-yjaiybwf	99	38	)	)	-RRB-
cord-001207-yjaiybwf	100	1	according	accord	VBG
cord-001207-yjaiybwf	100	2	to	to	IN
cord-001207-yjaiybwf	100	3	the	the	DT
cord-001207-yjaiybwf	100	4	protocol	protocol	NN
cord-001207-yjaiybwf	100	5	recommended	recommend	VBN
cord-001207-yjaiybwf	100	6	by	by	IN
cord-001207-yjaiybwf	100	7	the	the	DT
cord-001207-yjaiybwf	100	8	supplier	supplier	NN
cord-001207-yjaiybwf	100	9	;	;	:
cord-001207-yjaiybwf	100	10	however	however	RB
cord-001207-yjaiybwf	100	11	,	,	,
cord-001207-yjaiybwf	100	12	the	the	DT
cord-001207-yjaiybwf	100	13	annealing	anneal	VBG
cord-001207-yjaiybwf	100	14	temperature	temperature	NN
cord-001207-yjaiybwf	100	15	was	be	VBD
cord-001207-yjaiybwf	100	16	decreased	decrease	VBN
cord-001207-yjaiybwf	100	17	to	to	IN
cord-001207-yjaiybwf	100	18	40uC	40uc	CD
cord-001207-yjaiybwf	100	19	(	(	-LRB-
cord-001207-yjaiybwf	100	20	2	2	CD
cord-001207-yjaiybwf	100	21	cycles	cycle	NNS
cord-001207-yjaiybwf	100	22	)	)	-RRB-
cord-001207-yjaiybwf	100	23	and	and	CC
cord-001207-yjaiybwf	100	24	45uC	45uc	CD
cord-001207-yjaiybwf	100	25	(	(	-LRB-
cord-001207-yjaiybwf	100	26	2	2	CD
cord-001207-yjaiybwf	100	27	cycles	cycle	NNS
cord-001207-yjaiybwf	100	28	)	)	-RRB-
cord-001207-yjaiybwf	100	29	in	in	IN
cord-001207-yjaiybwf	100	30	order	order	NN
cord-001207-yjaiybwf	100	31	to	to	TO
cord-001207-yjaiybwf	100	32	enable	enable	VB
cord-001207-yjaiybwf	100	33	the	the	DT
cord-001207-yjaiybwf	100	34	simultaneous	simultaneous	JJ
cord-001207-yjaiybwf	100	35	amplification	amplification	NN
cord-001207-yjaiybwf	100	36	of	of	IN
cord-001207-yjaiybwf	100	37	DNA	DNA	NNP
cord-001207-yjaiybwf	100	38	and	and	CC
cord-001207-yjaiybwf	100	39	RNA	RNA	NNP
cord-001207-yjaiybwf	100	40	[	[	-LRB-
cord-001207-yjaiybwf	100	41	10	10	CD
cord-001207-yjaiybwf	100	42	]	]	-RRB-
cord-001207-yjaiybwf	100	43	.	.	.
cord-001207-yjaiybwf	101	1	Aliquots	Aliquots	NNP
cord-001207-yjaiybwf	101	2	of	of	IN
cord-001207-yjaiybwf	101	3	75	75	CD
cord-001207-yjaiybwf	101	4	ml	ml	NNS
cord-001207-yjaiybwf	101	5	each	each	DT
cord-001207-yjaiybwf	101	6	were	be	VBD
cord-001207-yjaiybwf	101	7	removed	remove	VBN
cord-001207-yjaiybwf	101	8	from	from	IN
cord-001207-yjaiybwf	101	9	the	the	DT
cord-001207-yjaiybwf	101	10	WTA2	WTA2	NNP
cord-001207-yjaiybwf	101	11	reaction	reaction	NN
cord-001207-yjaiybwf	101	12	at	at	IN
cord-001207-yjaiybwf	101	13	different	different	JJ
cord-001207-yjaiybwf	101	14	cycle	cycle	NN
cord-001207-yjaiybwf	101	15	numbers	number	NNS
cord-001207-yjaiybwf	101	16	,	,	,
cord-001207-yjaiybwf	101	17	purified	purify	VBN
cord-001207-yjaiybwf	101	18	and	and	CC
cord-001207-yjaiybwf	101	19	size	size	NN
cord-001207-yjaiybwf	101	20	-	-	HYPH
cord-001207-yjaiybwf	101	21	selected	select	VBN
cord-001207-yjaiybwf	101	22	using	use	VBG
cord-001207-yjaiybwf	101	23	MobiSpin	MobiSpin	NNP
cord-001207-yjaiybwf	101	24	S-400	S-400	NNP
cord-001207-yjaiybwf	101	25	Columns	Columns	NNPS
cord-001207-yjaiybwf	101	26	(	(	-LRB-
cord-001207-yjaiybwf	101	27	MoBiTec	MoBiTec	NNP
cord-001207-yjaiybwf	101	28	,	,	,
cord-001207-yjaiybwf	101	29	Göttingen	Göttingen	NNP
cord-001207-yjaiybwf	101	30	,	,	,
cord-001207-yjaiybwf	101	31	Germany	Germany	NNP
cord-001207-yjaiybwf	101	32	)	)	-RRB-
cord-001207-yjaiybwf	101	33	.	.	.
cord-001207-yjaiybwf	102	1	The	the	DT
cord-001207-yjaiybwf	102	2	DNA	dna	NN
cord-001207-yjaiybwf	102	3	concentration	concentration	NN
cord-001207-yjaiybwf	102	4	was	be	VBD
cord-001207-yjaiybwf	102	5	measured	measure	VBN
cord-001207-yjaiybwf	102	6	from	from	IN
cord-001207-yjaiybwf	102	7	the	the	DT
cord-001207-yjaiybwf	102	8	preparations	preparation	NNS
cord-001207-yjaiybwf	102	9	using	use	VBG
cord-001207-yjaiybwf	102	10	a	a	DT
cord-001207-yjaiybwf	102	11	nanodrop	nanodrop	NN
cord-001207-yjaiybwf	102	12	spectrometer	spectrometer	NN
cord-001207-yjaiybwf	102	13	(	(	-LRB-
cord-001207-yjaiybwf	102	14	Analytic	Analytic	NNP
cord-001207-yjaiybwf	102	15	Jena	Jena	NNP
cord-001207-yjaiybwf	102	16	,	,	,
cord-001207-yjaiybwf	102	17	Jena	Jena	NNP
cord-001207-yjaiybwf	102	18	,	,	,
cord-001207-yjaiybwf	102	19	Germany	Germany	NNP
cord-001207-yjaiybwf	102	20	)	)	-RRB-
cord-001207-yjaiybwf	102	21	and	and	CC
cord-001207-yjaiybwf	102	22	the	the	DT
cord-001207-yjaiybwf	102	23	preparation	preparation	NN
cord-001207-yjaiybwf	102	24	derived	derive	VBN
cord-001207-yjaiybwf	102	25	from	from	IN
cord-001207-yjaiybwf	102	26	a	a	DT
cord-001207-yjaiybwf	102	27	minimum	minimum	NN
cord-001207-yjaiybwf	102	28	of	of	IN
cord-001207-yjaiybwf	102	29	amplification	amplification	NN
cord-001207-yjaiybwf	102	30	cycles	cycle	NNS
cord-001207-yjaiybwf	102	31	with	with	IN
cord-001207-yjaiybwf	102	32	a	a	DT
cord-001207-yjaiybwf	102	33	DNA	dna	NN
cord-001207-yjaiybwf	102	34	concentration	concentration	NN
cord-001207-yjaiybwf	102	35	above	above	IN
cord-001207-yjaiybwf	102	36	50	50	CD
cord-001207-yjaiybwf	102	37	ng	ng	NNP
cord-001207-yjaiybwf	102	38	/	/	SYM
cord-001207-yjaiybwf	102	39	ml	ml	NN
cord-001207-yjaiybwf	102	40	was	be	VBD
cord-001207-yjaiybwf	102	41	chosen	choose	VBN
cord-001207-yjaiybwf	102	42	for	for	IN
cord-001207-yjaiybwf	102	43	deep	deep	JJ
cord-001207-yjaiybwf	102	44	sequencing	sequencing	NN
cord-001207-yjaiybwf	102	45	.	.	.
cord-001207-yjaiybwf	103	1	A	a	DT
cord-001207-yjaiybwf	103	2	total	total	NN
cord-001207-yjaiybwf	103	3	of	of	IN
cord-001207-yjaiybwf	103	4	1	1	CD
cord-001207-yjaiybwf	103	5	mg	mg	NNP
cord-001207-yjaiybwf	103	6	DNA	DNA	NNP
cord-001207-yjaiybwf	103	7	was	be	VBD
cord-001207-yjaiybwf	103	8	used	use	VBN
cord-001207-yjaiybwf	103	9	for	for	IN
cord-001207-yjaiybwf	103	10	deep	deep	JJ
cord-001207-yjaiybwf	103	11	sequencing	sequencing	NN
cord-001207-yjaiybwf	103	12	on	on	IN
cord-001207-yjaiybwf	103	13	a	a	DT
cord-001207-yjaiybwf	103	14	1/8	1/8	CD
cord-001207-yjaiybwf	103	15	plate	plate	NN
cord-001207-yjaiybwf	103	16	of	of	IN
cord-001207-yjaiybwf	103	17	the	the	DT
cord-001207-yjaiybwf	103	18	GS	GS	NNP
cord-001207-yjaiybwf	103	19	-	-	HYPH
cord-001207-yjaiybwf	103	20	FLX	FLX	NNP
cord-001207-yjaiybwf	103	21	sequencer	sequencer	NN
cord-001207-yjaiybwf	103	22	454	454	CD
cord-001207-yjaiybwf	103	23	Titanium	titanium	NN
cord-001207-yjaiybwf	103	24	(	(	-LRB-
cord-001207-yjaiybwf	103	25	GS	GS	NNP
cord-001207-yjaiybwf	103	26	Titanium	Titanium	NNP
cord-001207-yjaiybwf	103	27	SV	SV	NNP
cord-001207-yjaiybwf	103	28	emPCR	empcr	NN
cord-001207-yjaiybwf	103	29	kit	kit	NN
cord-001207-yjaiybwf	103	30	(	(	-LRB-
cord-001207-yjaiybwf	103	31	Lib	Lib	NNP
cord-001207-yjaiybwf	103	32	-	-	HYPH
cord-001207-yjaiybwf	103	33	L	L	NNP
cord-001207-yjaiybwf	103	34	)	)	-RRB-
cord-001207-yjaiybwf	103	35	v2	v2	NN
cord-001207-yjaiybwf	103	36	;	;	:
cord-001207-yjaiybwf	103	37	GS	GS	NNP
cord-001207-yjaiybwf	103	38	Titanium	Titanium	NNP
cord-001207-yjaiybwf	103	39	PicoTiterPlate	PicoTiterPlate	NNP
cord-001207-yjaiybwf	103	40	Kit	kit	NN
cord-001207-yjaiybwf	103	41	70675	70675	CD
cord-001207-yjaiybwf	103	42	;	;	:
cord-001207-yjaiybwf	103	43	GS	GS	NNP
cord-001207-yjaiybwf	103	44	Titanium	Titanium	NNP
cord-001207-yjaiybwf	103	45	Sequencing	Sequencing	NNP
cord-001207-yjaiybwf	103	46	Kit	kit	NN
cord-001207-yjaiybwf	103	47	XLR70	xlr70	NN
cord-001207-yjaiybwf	103	48	t	t	NN
cord-001207-yjaiybwf	103	49	;	;	:
cord-001207-yjaiybwf	103	50	Life	Life	NNP
cord-001207-yjaiybwf	103	51	Sciences	Sciences	NNPS
cord-001207-yjaiybwf	103	52	,	,	,
cord-001207-yjaiybwf	103	53	Roche	Roche	NNP
cord-001207-yjaiybwf	103	54	,	,	,
cord-001207-yjaiybwf	103	55	Branford	Branford	NNP
cord-001207-yjaiybwf	103	56	,	,	,
cord-001207-yjaiybwf	103	57	USA	USA	NNP
cord-001207-yjaiybwf	103	58	)	)	-RRB-
cord-001207-yjaiybwf	104	1	according	accord	VBG
cord-001207-yjaiybwf	104	2	to	to	IN
cord-001207-yjaiybwf	104	3	the	the	DT
cord-001207-yjaiybwf	104	4	manufacturer	manufacturer	NN
cord-001207-yjaiybwf	104	5	's	's	POS
cord-001207-yjaiybwf	104	6	protocol	protocol	NN
cord-001207-yjaiybwf	104	7	.	.	.
cord-001207-yjaiybwf	105	1	The	the	DT
cord-001207-yjaiybwf	105	2	raw	raw	JJ
cord-001207-yjaiybwf	105	3	sequence	sequence	NN
cord-001207-yjaiybwf	105	4	data	datum	NNS
cord-001207-yjaiybwf	105	5	have	have	VBP
cord-001207-yjaiybwf	105	6	been	be	VBN
cord-001207-yjaiybwf	105	7	submitted	submit	VBN
cord-001207-yjaiybwf	105	8	to	to	IN
cord-001207-yjaiybwf	105	9	the	the	DT
cord-001207-yjaiybwf	105	10	Sequence	sequence	NN
cord-001207-yjaiybwf	105	11	Read	Read	NNP
cord-001207-yjaiybwf	105	12	Archive	Archive	NNP
cord-001207-yjaiybwf	105	13	(	(	-LRB-
cord-001207-yjaiybwf	105	14	SRA	SRA	NNP
cord-001207-yjaiybwf	105	15	)	)	-RRB-
cord-001207-yjaiybwf	105	16	at	at	IN
cord-001207-yjaiybwf	105	17	GenBank	GenBank	NNP
cord-001207-yjaiybwf	105	18	as	as	IN
cord-001207-yjaiybwf	105	19	BioProject	BioProject	NNP
cord-001207-yjaiybwf	105	20	PRJNA232620	prjna232620	CD
cord-001207-yjaiybwf	105	21	with	with	IN
cord-001207-yjaiybwf	105	22	SRA	SRA	NNP
cord-001207-yjaiybwf	105	23	accession	accession	NN
cord-001207-yjaiybwf	105	24	numbers	number	NNS
cord-001207-yjaiybwf	105	25	SRP034937	srp034937	NN
cord-001207-yjaiybwf	105	26	(	(	-LRB-
cord-001207-yjaiybwf	105	27	SRX396427-SRX396434	SRX396427-SRX396434	NNP
cord-001207-yjaiybwf	105	28	)	)	-RRB-
cord-001207-yjaiybwf	105	29	.	.	.
cord-001207-yjaiybwf	106	1	Primary	primary	JJ
cord-001207-yjaiybwf	106	2	sequence	sequence	NN
cord-001207-yjaiybwf	106	3	analysis	analysis	NN
cord-001207-yjaiybwf	106	4	was	be	VBD
cord-001207-yjaiybwf	106	5	performed	perform	VBN
cord-001207-yjaiybwf	106	6	in	in	IN
cord-001207-yjaiybwf	106	7	two	two	CD
cord-001207-yjaiybwf	106	8	steps	step	NNS
cord-001207-yjaiybwf	106	9	:	:	:
cord-001207-yjaiybwf	106	10	identification	identification	NN
cord-001207-yjaiybwf	106	11	of	of	IN
cord-001207-yjaiybwf	106	12	all	all	DT
cord-001207-yjaiybwf	106	13	virus	virus	NN
cord-001207-yjaiybwf	106	14	species	specie	NNS
cord-001207-yjaiybwf	106	15	included	include	VBN
cord-001207-yjaiybwf	106	16	in	in	IN
cord-001207-yjaiybwf	106	17	the	the	DT
cord-001207-yjaiybwf	106	18	samples	sample	NNS
cord-001207-yjaiybwf	106	19	and	and	CC
cord-001207-yjaiybwf	106	20	analysis	analysis	NN
cord-001207-yjaiybwf	106	21	of	of	IN
cord-001207-yjaiybwf	106	22	species	specie	NNS
cord-001207-yjaiybwf	106	23	abundances	abundance	NNS
cord-001207-yjaiybwf	106	24	regarding	regard	VBG
cord-001207-yjaiybwf	106	25	selected	select	VBN
cord-001207-yjaiybwf	106	26	sets	set	NNS
cord-001207-yjaiybwf	106	27	of	of	IN
cord-001207-yjaiybwf	106	28	species	specie	NNS
cord-001207-yjaiybwf	106	29	.	.	.
cord-001207-yjaiybwf	107	1	Raw	raw	JJ
cord-001207-yjaiybwf	107	2	sequence	sequence	NN
cord-001207-yjaiybwf	107	3	reads	read	VBZ
cord-001207-yjaiybwf	107	4	were	be	VBD
cord-001207-yjaiybwf	107	5	subjected	subject	VBN
cord-001207-yjaiybwf	107	6	to	to	TO
cord-001207-yjaiybwf	107	7	primer	primer	VB
cord-001207-yjaiybwf	107	8	/	/	SYM
cord-001207-yjaiybwf	107	9	adaptor	adaptor	NN
cord-001207-yjaiybwf	107	10	trimming	trimming	NN
cord-001207-yjaiybwf	107	11	using	use	VBG
cord-001207-yjaiybwf	107	12	SeqMan	SeqMan	NNP
cord-001207-yjaiybwf	107	13	(	(	-LRB-
cord-001207-yjaiybwf	107	14	DNASTAR	DNASTAR	NNP
cord-001207-yjaiybwf	107	15	,	,	,
cord-001207-yjaiybwf	107	16	Lasergene	Lasergene	NNP
cord-001207-yjaiybwf	107	17	,	,	,
cord-001207-yjaiybwf	107	18	USA	USA	NNP
cord-001207-yjaiybwf	107	19	)	)	-RRB-
cord-001207-yjaiybwf	107	20	and	and	CC
cord-001207-yjaiybwf	107	21	selection	selection	NN
cord-001207-yjaiybwf	107	22	for	for	IN
cord-001207-yjaiybwf	107	23	a	a	DT
cord-001207-yjaiybwf	107	24	minimum	minimum	JJ
cord-001207-yjaiybwf	107	25	length	length	NN
cord-001207-yjaiybwf	107	26	of	of	IN
cord-001207-yjaiybwf	107	27	50	50	CD
cord-001207-yjaiybwf	107	28	nt	nt	RB
cord-001207-yjaiybwf	107	29	.	.	.
cord-001207-yjaiybwf	108	1	In	in	IN
cord-001207-yjaiybwf	108	2	parallel	parallel	NN
cord-001207-yjaiybwf	108	3	,	,	,
cord-001207-yjaiybwf	108	4	all	all	DT
cord-001207-yjaiybwf	108	5	primary	primary	JJ
cord-001207-yjaiybwf	108	6	reads	read	NNS
cord-001207-yjaiybwf	108	7	were	be	VBD
cord-001207-yjaiybwf	108	8	subjected	subject	VBN
cord-001207-yjaiybwf	108	9	to	to	IN
cord-001207-yjaiybwf	108	10	de	de	NNP
cord-001207-yjaiybwf	108	11	novo	novo	NNP
cord-001207-yjaiybwf	108	12	contig	contig	NNP
cord-001207-yjaiybwf	108	13	assemble	assemble	VBP
cord-001207-yjaiybwf	108	14	using	use	VBG
cord-001207-yjaiybwf	108	15	the	the	DT
cord-001207-yjaiybwf	108	16	454	454	CD
cord-001207-yjaiybwf	108	17	Newbler	Newbler	NNP
cord-001207-yjaiybwf	108	18	Assembler	Assembler	NNP
cord-001207-yjaiybwf	108	19	[	[	-LRB-
cord-001207-yjaiybwf	108	20	40	40	CD
cord-001207-yjaiybwf	108	21	]	]	-RRB-
cord-001207-yjaiybwf	108	22	software	software	NN
cord-001207-yjaiybwf	108	23	,	,	,
cord-001207-yjaiybwf	108	24	with	with	IN
cord-001207-yjaiybwf	108	25	criteria	criterion	NNS
cord-001207-yjaiybwf	108	26	of	of	IN
cord-001207-yjaiybwf	108	27	90	90	CD
cord-001207-yjaiybwf	108	28	%	%	NN
cord-001207-yjaiybwf	108	29	minimum	minimum	JJ
cord-001207-yjaiybwf	108	30	overlap	overlap	NN
cord-001207-yjaiybwf	108	31	identity	identity	NN
cord-001207-yjaiybwf	108	32	and	and	CC
cord-001207-yjaiybwf	108	33	a	a	DT
cord-001207-yjaiybwf	108	34	minimum	minimum	JJ
cord-001207-yjaiybwf	108	35	overlap	overlap	NN
cord-001207-yjaiybwf	108	36	length	length	NN
cord-001207-yjaiybwf	108	37	of	of	IN
cord-001207-yjaiybwf	108	38	40	40	CD
cord-001207-yjaiybwf	108	39	nt	nt	RB
cord-001207-yjaiybwf	108	40	.	.	.
cord-001207-yjaiybwf	109	1	In	in	IN
cord-001207-yjaiybwf	109	2	order	order	NN
cord-001207-yjaiybwf	109	3	to	to	TO
cord-001207-yjaiybwf	109	4	create	create	VB
cord-001207-yjaiybwf	109	5	a	a	DT
cord-001207-yjaiybwf	109	6	local	local	JJ
cord-001207-yjaiybwf	109	7	database	database	NN
cord-001207-yjaiybwf	109	8	containing	contain	VBG
cord-001207-yjaiybwf	109	9	all	all	DT
cord-001207-yjaiybwf	109	10	virus	virus	NN
cord-001207-yjaiybwf	109	11	sequences	sequence	NNS
cord-001207-yjaiybwf	109	12	with	with	IN
cord-001207-yjaiybwf	109	13	significant	significant	JJ
cord-001207-yjaiybwf	109	14	homologies	homology	NNS
cord-001207-yjaiybwf	109	15	to	to	IN
cord-001207-yjaiybwf	109	16	the	the	DT
cord-001207-yjaiybwf	109	17	sequence	sequence	NN
cord-001207-yjaiybwf	109	18	reads	read	VBZ
cord-001207-yjaiybwf	109	19	,	,	,
cord-001207-yjaiybwf	109	20	homology	homology	NN
cord-001207-yjaiybwf	109	21	searches	search	NNS
cord-001207-yjaiybwf	109	22	for	for	IN
cord-001207-yjaiybwf	109	23	all	all	DT
cord-001207-yjaiybwf	109	24	primary	primary	JJ
cord-001207-yjaiybwf	109	25	reads	read	NNS
cord-001207-yjaiybwf	109	26	were	be	VBD
cord-001207-yjaiybwf	109	27	performed	perform	VBN
cord-001207-yjaiybwf	109	28	with	with	IN
cord-001207-yjaiybwf	109	29	BLASTx	BLASTx	NNS
cord-001207-yjaiybwf	109	30	[	[	-LRB-
cord-001207-yjaiybwf	109	31	41	41	CD
cord-001207-yjaiybwf	109	32	]	]	-RRB-
cord-001207-yjaiybwf	109	33	against	against	IN
cord-001207-yjaiybwf	109	34	the	the	DT
cord-001207-yjaiybwf	109	35	non	non	JJ
cord-001207-yjaiybwf	109	36	-	-	JJ
cord-001207-yjaiybwf	109	37	redundant	redundant	JJ
cord-001207-yjaiybwf	109	38	nucleotide	nucleotide	JJ
cord-001207-yjaiybwf	109	39	database	database	NN
cord-001207-yjaiybwf	109	40	of	of	IN
cord-001207-yjaiybwf	109	41	NCBI	NCBI	NNP
cord-001207-yjaiybwf	109	42	[	[	-LRB-
cord-001207-yjaiybwf	109	43	42	42	CD
cord-001207-yjaiybwf	109	44	]	]	-RRB-
cord-001207-yjaiybwf	109	45	.	.	.
cord-001207-yjaiybwf	110	1	In	in	IN
cord-001207-yjaiybwf	110	2	parallel	parallel	NN
cord-001207-yjaiybwf	110	3	,	,	,
cord-001207-yjaiybwf	110	4	homology	homology	NN
cord-001207-yjaiybwf	110	5	searches	search	NNS
cord-001207-yjaiybwf	110	6	for	for	IN
cord-001207-yjaiybwf	110	7	the	the	DT
cord-001207-yjaiybwf	110	8	contigs	contigs	NNP
cord-001207-yjaiybwf	110	9	were	be	VBD
cord-001207-yjaiybwf	110	10	performed	perform	VBN
cord-001207-yjaiybwf	110	11	with	with	IN
cord-001207-yjaiybwf	110	12	CLC	CLC	NNP
cord-001207-yjaiybwf	110	13	Main	Main	NNP
cord-001207-yjaiybwf	110	14	Workbench	Workbench	NNP
cord-001207-yjaiybwf	110	15	6.2	6.2	CD
cord-001207-yjaiybwf	110	16	[	[	-LRB-
cord-001207-yjaiybwf	110	17	43	43	CD
cord-001207-yjaiybwf	110	18	]	]	-RRB-
cord-001207-yjaiybwf	110	19	against	against	IN
cord-001207-yjaiybwf	110	20	the	the	DT
cord-001207-yjaiybwf	110	21	viral	viral	JJ
cord-001207-yjaiybwf	110	22	genome	genome	NN
cord-001207-yjaiybwf	110	23	nonredundant	nonredundant	JJ
cord-001207-yjaiybwf	110	24	reference	reference	NN
cord-001207-yjaiybwf	110	25	sequence	sequence	NN
cord-001207-yjaiybwf	110	26	nucleotide	nucleotide	JJ
cord-001207-yjaiybwf	110	27	database	database	NN
cord-001207-yjaiybwf	110	28	[	[	-LRB-
cord-001207-yjaiybwf	110	29	44	44	CD
cord-001207-yjaiybwf	110	30	]	]	-RRB-
cord-001207-yjaiybwf	110	31	and	and	CC
cord-001207-yjaiybwf	110	32	additional	additional	JJ
cord-001207-yjaiybwf	110	33	sequences	sequence	NNS
cord-001207-yjaiybwf	110	34	from	from	IN
cord-001207-yjaiybwf	110	35	recently	recently	RB
cord-001207-yjaiybwf	110	36	discovered	discover	VBN
cord-001207-yjaiybwf	110	37	viruses	virus	NNS
cord-001207-yjaiybwf	110	38	using	use	VBG
cord-001207-yjaiybwf	110	39	the	the	DT
cord-001207-yjaiybwf	110	40	tBLASTx	tblastx	NN
cord-001207-yjaiybwf	110	41	algorithms	algorithm	NNS
cord-001207-yjaiybwf	110	42	[	[	-LRB-
cord-001207-yjaiybwf	110	43	39	39	CD
cord-001207-yjaiybwf	110	44	]	]	-RRB-
cord-001207-yjaiybwf	110	45	.	.	.
cord-001207-yjaiybwf	111	1	From	from	IN
cord-001207-yjaiybwf	111	2	both	both	DT
cord-001207-yjaiybwf	111	3	approaches	approach	NNS
cord-001207-yjaiybwf	111	4	,	,	,
cord-001207-yjaiybwf	111	5	all	all	DT
cord-001207-yjaiybwf	111	6	BLAST	blast	NN
cord-001207-yjaiybwf	111	7	results	result	VBZ
cord-001207-yjaiybwf	111	8	with	with	IN
cord-001207-yjaiybwf	111	9	an	an	DT
cord-001207-yjaiybwf	111	10	E	e	NN
cord-001207-yjaiybwf	111	11	-	-	NN
cord-001207-yjaiybwf	111	12	value	value	NN
cord-001207-yjaiybwf	111	13	,	,	,
cord-001207-yjaiybwf	111	14	=	=	SYM
cord-001207-yjaiybwf	111	15	10	10	CD
cord-001207-yjaiybwf	111	16	24	24	CD
cord-001207-yjaiybwf	111	17	were	be	VBD
cord-001207-yjaiybwf	111	18	selected	select	VBN
cord-001207-yjaiybwf	111	19	and	and	CC
cord-001207-yjaiybwf	111	20	used	use	VBN
cord-001207-yjaiybwf	111	21	for	for	IN
cord-001207-yjaiybwf	111	22	creation	creation	NN
cord-001207-yjaiybwf	111	23	of	of	IN
cord-001207-yjaiybwf	111	24	the	the	DT
cord-001207-yjaiybwf	111	25	local	local	JJ
cord-001207-yjaiybwf	111	26	sequence	sequence	NN
cord-001207-yjaiybwf	111	27	database	database	NN
cord-001207-yjaiybwf	111	28	.	.	.
cord-001207-yjaiybwf	112	1	Using	use	VBG
cord-001207-yjaiybwf	112	2	this	this	DT
cord-001207-yjaiybwf	112	3	database	database	NN
cord-001207-yjaiybwf	112	4	,	,	,
cord-001207-yjaiybwf	112	5	abundances	abundance	NNS
cord-001207-yjaiybwf	112	6	of	of	IN
cord-001207-yjaiybwf	112	7	species	specie	NNS
cord-001207-yjaiybwf	112	8	were	be	VBD
cord-001207-yjaiybwf	112	9	calculated	calculate	VBN
cord-001207-yjaiybwf	112	10	.	.	.
cord-001207-yjaiybwf	113	1	For	for	IN
cord-001207-yjaiybwf	113	2	Bray	Bray	NNP
cord-001207-yjaiybwf	113	3	Curtis	Curtis	NNP
cord-001207-yjaiybwf	113	4	dissimilarity	dissimilarity	NN
cord-001207-yjaiybwf	113	5	(	(	-LRB-
cord-001207-yjaiybwf	113	6	see	see	VB
cord-001207-yjaiybwf	113	7	below	below	RB
cord-001207-yjaiybwf	113	8	)	)	-RRB-
cord-001207-yjaiybwf	113	9	,	,	,
cord-001207-yjaiybwf	113	10	specific	specific	JJ
cord-001207-yjaiybwf	113	11	subsets	subset	NNS
cord-001207-yjaiybwf	113	12	,	,	,
cord-001207-yjaiybwf	113	13	which	which	WDT
cord-001207-yjaiybwf	113	14	consisted	consist	VBD
cord-001207-yjaiybwf	113	15	of	of	IN
cord-001207-yjaiybwf	113	16	mammalian	mammalian	JJ
cord-001207-yjaiybwf	113	17	viruses	virus	NNS
cord-001207-yjaiybwf	113	18	,	,	,
cord-001207-yjaiybwf	113	19	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	113	20	or	or	CC
cord-001207-yjaiybwf	113	21	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	113	22	phages	phage	NNS
cord-001207-yjaiybwf	113	23	,	,	,
cord-001207-yjaiybwf	113	24	were	be	VBD
cord-001207-yjaiybwf	113	25	used	use	VBN
cord-001207-yjaiybwf	113	26	.	.	.
cord-001207-yjaiybwf	114	1	In	in	IN
cord-001207-yjaiybwf	114	2	all	all	DT
cord-001207-yjaiybwf	114	3	cases	case	NNS
cord-001207-yjaiybwf	114	4	,	,	,
cord-001207-yjaiybwf	114	5	trimmed	trim	VBN
cord-001207-yjaiybwf	114	6	reads	read	NNS
cord-001207-yjaiybwf	114	7	were	be	VBD
cord-001207-yjaiybwf	114	8	mapped	map	VBN
cord-001207-yjaiybwf	114	9	against	against	IN
cord-001207-yjaiybwf	114	10	the	the	DT
cord-001207-yjaiybwf	114	11	sequences	sequence	NNS
cord-001207-yjaiybwf	114	12	of	of	IN
cord-001207-yjaiybwf	114	13	the	the	DT
cord-001207-yjaiybwf	114	14	local	local	JJ
cord-001207-yjaiybwf	114	15	database	database	NN
cord-001207-yjaiybwf	114	16	to	to	TO
cord-001207-yjaiybwf	114	17	calculate	calculate	VB
cord-001207-yjaiybwf	114	18	species	specie	NNS
cord-001207-yjaiybwf	114	19	abundances	abundance	NNS
cord-001207-yjaiybwf	114	20	with	with	IN
cord-001207-yjaiybwf	114	21	the	the	DT
cord-001207-yjaiybwf	114	22	readmapper	readmapper	NN
cord-001207-yjaiybwf	114	23	Bowtie	Bowtie	NNP
cord-001207-yjaiybwf	114	24	2	2	CD
cord-001207-yjaiybwf	114	25	2.0.5	2.0.5	CD
cord-001207-yjaiybwf	114	26	[	[	-LRB-
cord-001207-yjaiybwf	114	27	45	45	CD
cord-001207-yjaiybwf	114	28	]	]	-RRB-
cord-001207-yjaiybwf	114	29	.	.	.
cord-001207-yjaiybwf	115	1	Thereafter	thereafter	RB
cord-001207-yjaiybwf	115	2	,	,	,
cord-001207-yjaiybwf	115	3	numbers	number	NNS
cord-001207-yjaiybwf	115	4	of	of	IN
cord-001207-yjaiybwf	115	5	mapped	map	VBN
cord-001207-yjaiybwf	115	6	reads	read	NNS
cord-001207-yjaiybwf	115	7	were	be	VBD
cord-001207-yjaiybwf	115	8	corrected	correct	VBN
cord-001207-yjaiybwf	115	9	for	for	IN
cord-001207-yjaiybwf	115	10	multiple	multiple	JJ
cord-001207-yjaiybwf	115	11	read	read	NN
cord-001207-yjaiybwf	115	12	assignments	assignment	NNS
cord-001207-yjaiybwf	115	13	.	.	.
cord-001207-yjaiybwf	116	1	The	the	DT
cord-001207-yjaiybwf	116	2	reads	read	NNS
cord-001207-yjaiybwf	116	3	of	of	IN
cord-001207-yjaiybwf	116	4	the	the	DT
cord-001207-yjaiybwf	116	5	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	116	6	used	use	VBN
cord-001207-yjaiybwf	116	7	as	as	IN
cord-001207-yjaiybwf	116	8	process	process	NN
cord-001207-yjaiybwf	116	9	control	control	NN
cord-001207-yjaiybwf	116	10	were	be	VBD
cord-001207-yjaiybwf	116	11	subtracted	subtract	VBN
cord-001207-yjaiybwf	116	12	from	from	IN
cord-001207-yjaiybwf	116	13	the	the	DT
cord-001207-yjaiybwf	116	14	number	number	NN
cord-001207-yjaiybwf	116	15	of	of	IN
cord-001207-yjaiybwf	116	16	the	the	DT
cord-001207-yjaiybwf	116	17	virus	virus	NN
cord-001207-yjaiybwf	116	18	reads	read	VBZ
cord-001207-yjaiybwf	116	19	in	in	IN
cord-001207-yjaiybwf	116	20	subsequent	subsequent	JJ
cord-001207-yjaiybwf	116	21	analyses	analysis	NNS
cord-001207-yjaiybwf	116	22	.	.	.
cord-001207-yjaiybwf	117	1	Shannon	Shannon	NNP
cord-001207-yjaiybwf	117	2	index	index	NN
cord-001207-yjaiybwf	117	3	[	[	-LRB-
cord-001207-yjaiybwf	117	4	46	46	CD
cord-001207-yjaiybwf	117	5	]	]	-RRB-
cord-001207-yjaiybwf	117	6	was	be	VBD
cord-001207-yjaiybwf	117	7	calculated	calculate	VBN
cord-001207-yjaiybwf	117	8	to	to	TO
cord-001207-yjaiybwf	117	9	compare	compare	VB
cord-001207-yjaiybwf	117	10	the	the	DT
cord-001207-yjaiybwf	117	11	diversity	diversity	NN
cord-001207-yjaiybwf	117	12	of	of	IN
cord-001207-yjaiybwf	117	13	the	the	DT
cord-001207-yjaiybwf	117	14	species	specie	NNS
cord-001207-yjaiybwf	117	15	identified	identify	VBN
cord-001207-yjaiybwf	117	16	by	by	IN
cord-001207-yjaiybwf	117	17	primary	primary	JJ
cord-001207-yjaiybwf	117	18	reads	read	NNS
cord-001207-yjaiybwf	117	19	.	.	.
cord-001207-yjaiybwf	118	1	The	the	DT
cord-001207-yjaiybwf	118	2	Shannon	Shannon	NNP
cord-001207-yjaiybwf	118	3	index	index	NN
cord-001207-yjaiybwf	118	4	is	be	VBZ
cord-001207-yjaiybwf	118	5	maximal	maximal	JJ
cord-001207-yjaiybwf	118	6	for	for	IN
cord-001207-yjaiybwf	118	7	a	a	DT
cord-001207-yjaiybwf	118	8	sample	sample	NN
cord-001207-yjaiybwf	118	9	with	with	IN
cord-001207-yjaiybwf	118	10	a	a	DT
cord-001207-yjaiybwf	118	11	balanced	balanced	JJ
cord-001207-yjaiybwf	118	12	species	species	NN
cord-001207-yjaiybwf	118	13	distribution	distribution	NN
cord-001207-yjaiybwf	118	14	and	and	CC
cord-001207-yjaiybwf	118	15	it	-PRON-	PRP
cord-001207-yjaiybwf	118	16	has	have	VBZ
cord-001207-yjaiybwf	118	17	a	a	DT
cord-001207-yjaiybwf	118	18	low	low	JJ
cord-001207-yjaiybwf	118	19	value	value	NN
cord-001207-yjaiybwf	118	20	for	for	IN
cord-001207-yjaiybwf	118	21	a	a	DT
cord-001207-yjaiybwf	118	22	sample	sample	NN
cord-001207-yjaiybwf	118	23	with	with	IN
cord-001207-yjaiybwf	118	24	an	an	DT
cord-001207-yjaiybwf	118	25	uneven	uneven	JJ
cord-001207-yjaiybwf	118	26	species	species	NN
cord-001207-yjaiybwf	118	27	distribution	distribution	NN
cord-001207-yjaiybwf	118	28	;	;	:
cord-001207-yjaiybwf	118	29	e.g.	e.g.	RB
cord-001207-yjaiybwf	118	30	if	if	IN
cord-001207-yjaiybwf	118	31	some	some	DT
cord-001207-yjaiybwf	118	32	single	single	JJ
cord-001207-yjaiybwf	118	33	species	specie	NNS
cord-001207-yjaiybwf	118	34	are	be	VBP
cord-001207-yjaiybwf	118	35	a	a	DT
cord-001207-yjaiybwf	118	36	highly	highly	RB
cord-001207-yjaiybwf	118	37	abundant	abundant	JJ
cord-001207-yjaiybwf	118	38	.	.	.
cord-001207-yjaiybwf	119	1	The	the	DT
cord-001207-yjaiybwf	119	2	maximal	maximal	JJ
cord-001207-yjaiybwf	119	3	value	value	NN
cord-001207-yjaiybwf	119	4	depends	depend	VBZ
cord-001207-yjaiybwf	119	5	on	on	IN
cord-001207-yjaiybwf	119	6	the	the	DT
cord-001207-yjaiybwf	119	7	number	number	NN
cord-001207-yjaiybwf	119	8	of	of	IN
cord-001207-yjaiybwf	119	9	species	specie	NNS
cord-001207-yjaiybwf	119	10	in	in	IN
cord-001207-yjaiybwf	119	11	a	a	DT
cord-001207-yjaiybwf	119	12	sample	sample	NN
cord-001207-yjaiybwf	119	13	.	.	.
cord-001207-yjaiybwf	120	1	Bray	Bray	NNP
cord-001207-yjaiybwf	120	2	Curtis	Curtis	NNP
cord-001207-yjaiybwf	120	3	dissimilarity	dissimilarity	NN
cord-001207-yjaiybwf	120	4	[	[	-LRB-
cord-001207-yjaiybwf	120	5	47	47	CD
cord-001207-yjaiybwf	120	6	]	]	-RRB-
cord-001207-yjaiybwf	120	7	was	be	VBD
cord-001207-yjaiybwf	120	8	calculated	calculate	VBN
cord-001207-yjaiybwf	120	9	for	for	IN
cord-001207-yjaiybwf	120	10	pairwise	pairwise	JJ
cord-001207-yjaiybwf	120	11	comparisons	comparison	NNS
cord-001207-yjaiybwf	120	12	of	of	IN
cord-001207-yjaiybwf	120	13	samples	sample	NNS
cord-001207-yjaiybwf	120	14	and	and	CC
cord-001207-yjaiybwf	120	15	dendrograms	dendrogram	NNS
cord-001207-yjaiybwf	120	16	were	be	VBD
cord-001207-yjaiybwf	120	17	constructed	construct	VBN
cord-001207-yjaiybwf	120	18	by	by	IN
cord-001207-yjaiybwf	120	19	hierarchical	hierarchical	JJ
cord-001207-yjaiybwf	120	20	clustering	clustering	NN
cord-001207-yjaiybwf	120	21	with	with	IN
cord-001207-yjaiybwf	120	22	the	the	DT
cord-001207-yjaiybwf	120	23	average	average	JJ
cord-001207-yjaiybwf	120	24	linkage	linkage	NN
cord-001207-yjaiybwf	120	25	method	method	NN
cord-001207-yjaiybwf	120	26	.	.	.
cord-001207-yjaiybwf	121	1	This	this	DT
cord-001207-yjaiybwf	121	2	analysis	analysis	NN
cord-001207-yjaiybwf	121	3	included	include	VBD
cord-001207-yjaiybwf	121	4	counting	counting	NN
cord-001207-yjaiybwf	121	5	of	of	IN
cord-001207-yjaiybwf	121	6	detected	detect	VBN
cord-001207-yjaiybwf	121	7	species	specie	NNS
cord-001207-yjaiybwf	121	8	and	and	CC
cord-001207-yjaiybwf	121	9	determination	determination	NN
cord-001207-yjaiybwf	121	10	of	of	IN
cord-001207-yjaiybwf	121	11	their	-PRON-	PRP$
cord-001207-yjaiybwf	121	12	taxonomy	taxonomy	NN
cord-001207-yjaiybwf	121	13	,	,	,
cord-001207-yjaiybwf	121	14	which	which	WDT
cord-001207-yjaiybwf	121	15	was	be	VBD
cord-001207-yjaiybwf	121	16	also	also	RB
cord-001207-yjaiybwf	121	17	used	use	VBN
cord-001207-yjaiybwf	121	18	to	to	TO
cord-001207-yjaiybwf	121	19	determine	determine	VB
cord-001207-yjaiybwf	121	20	the	the	DT
cord-001207-yjaiybwf	121	21	virus	virus	NN
cord-001207-yjaiybwf	121	22	hosts	host	NNS
cord-001207-yjaiybwf	121	23	(	(	-LRB-
cord-001207-yjaiybwf	121	24	bacteria	bacteria	NNS
cord-001207-yjaiybwf	121	25	,	,	,
cord-001207-yjaiybwf	121	26	vertebrates	vertebrate	NNS
cord-001207-yjaiybwf	121	27	,	,	,
cord-001207-yjaiybwf	121	28	plants	plant	NNS
cord-001207-yjaiybwf	121	29	etc	etc	FW
cord-001207-yjaiybwf	121	30	.	.	.
cord-001207-yjaiybwf	121	31	)	)	-RRB-
cord-001207-yjaiybwf	121	32	.	.	.
cord-001207-yjaiybwf	122	1	A	a	DT
cord-001207-yjaiybwf	122	2	total	total	NN
cord-001207-yjaiybwf	122	3	of	of	IN
cord-001207-yjaiybwf	122	4	8	8	CD
cord-001207-yjaiybwf	122	5	pooled	pooled	JJ
cord-001207-yjaiybwf	122	6	faecal	faecal	JJ
cord-001207-yjaiybwf	122	7	samples	sample	NNS
cord-001207-yjaiybwf	122	8	were	be	VBD
cord-001207-yjaiybwf	122	9	derived	derive	VBN
cord-001207-yjaiybwf	122	10	from	from	IN
cord-001207-yjaiybwf	122	11	sows	sow	NNS
cord-001207-yjaiybwf	122	12	and	and	CC
cord-001207-yjaiybwf	122	13	their	-PRON-	PRP$
cord-001207-yjaiybwf	122	14	piglets	piglet	NNS
cord-001207-yjaiybwf	122	15	from	from	IN
cord-001207-yjaiybwf	122	16	an	an	DT
cord-001207-yjaiybwf	122	17	experimental	experimental	JJ
cord-001207-yjaiybwf	122	18	feeding	feeding	NN
cord-001207-yjaiybwf	122	19	trial	trial	NN
cord-001207-yjaiybwf	122	20	with	with	IN
cord-001207-yjaiybwf	122	21	the	the	DT
cord-001207-yjaiybwf	122	22	probiotic	probiotic	JJ
cord-001207-yjaiybwf	122	23	bacterium	bacterium	NN
cord-001207-yjaiybwf	122	24	E.	E.	NNP
cord-001207-yjaiybwf	122	25	faecium	faecium	NN
cord-001207-yjaiybwf	122	26	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	122	27	10415	10415	CD
cord-001207-yjaiybwf	122	28	.	.	.
cord-001207-yjaiybwf	123	1	Four	four	CD
cord-001207-yjaiybwf	123	2	of	of	IN
cord-001207-yjaiybwf	123	3	the	the	DT
cord-001207-yjaiybwf	123	4	samples	sample	NNS
cord-001207-yjaiybwf	123	5	were	be	VBD
cord-001207-yjaiybwf	123	6	derived	derive	VBN
cord-001207-yjaiybwf	123	7	from	from	IN
cord-001207-yjaiybwf	123	8	animals	animal	NNS
cord-001207-yjaiybwf	123	9	receiving	receive	VBG
cord-001207-yjaiybwf	123	10	the	the	DT
cord-001207-yjaiybwf	123	11	probiotic	probiotic	JJ
cord-001207-yjaiybwf	123	12	bacterium	bacterium	NN
cord-001207-yjaiybwf	123	13	(	(	-LRB-
cord-001207-yjaiybwf	123	14	group	group	NN
cord-001207-yjaiybwf	123	15	P	p	NN
cord-001207-yjaiybwf	123	16	)	)	-RRB-
cord-001207-yjaiybwf	123	17	and	and	CC
cord-001207-yjaiybwf	123	18	four	four	CD
cord-001207-yjaiybwf	123	19	samples	sample	NNS
cord-001207-yjaiybwf	123	20	originated	originate	VBD
cord-001207-yjaiybwf	123	21	from	from	IN
cord-001207-yjaiybwf	123	22	the	the	DT
cord-001207-yjaiybwf	123	23	control	control	NN
cord-001207-yjaiybwf	123	24	group	group	NN
cord-001207-yjaiybwf	123	25	that	that	WDT
cord-001207-yjaiybwf	123	26	did	do	VBD
cord-001207-yjaiybwf	123	27	not	not	RB
cord-001207-yjaiybwf	123	28	receive	receive	VB
cord-001207-yjaiybwf	123	29	probiotics	probiotic	NNS
cord-001207-yjaiybwf	123	30	(	(	-LRB-
cord-001207-yjaiybwf	123	31	group	group	NN
cord-001207-yjaiybwf	123	32	C	C	NNP
cord-001207-yjaiybwf	123	33	)	)	-RRB-
cord-001207-yjaiybwf	123	34	.	.	.
cord-001207-yjaiybwf	124	1	A	a	DT
cord-001207-yjaiybwf	124	2	detailed	detailed	JJ
cord-001207-yjaiybwf	124	3	scheme	scheme	NN
cord-001207-yjaiybwf	124	4	of	of	IN
cord-001207-yjaiybwf	124	5	the	the	DT
cord-001207-yjaiybwf	124	6	feeding	feeding	NN
cord-001207-yjaiybwf	124	7	trial	trial	NN
cord-001207-yjaiybwf	124	8	is	be	VBZ
cord-001207-yjaiybwf	124	9	presented	present	VBN
cord-001207-yjaiybwf	124	10	in	in	IN
cord-001207-yjaiybwf	124	11	Figure	figure	NN
cord-001207-yjaiybwf	124	12	1	1	CD
cord-001207-yjaiybwf	124	13	.	.	.
cord-001207-yjaiybwf	125	1	The	the	DT
cord-001207-yjaiybwf	125	2	presence	presence	NN
cord-001207-yjaiybwf	125	3	of	of	IN
cord-001207-yjaiybwf	125	4	E.	E.	NNP
cord-001207-yjaiybwf	125	5	faecium	faecium	NN
cord-001207-yjaiybwf	125	6	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	125	7	10415	10415	CD
cord-001207-yjaiybwf	125	8	in	in	IN
cord-001207-yjaiybwf	125	9	the	the	DT
cord-001207-yjaiybwf	125	10	faeces	faece	NNS
cord-001207-yjaiybwf	125	11	of	of	IN
cord-001207-yjaiybwf	125	12	sows	sow	NNS
cord-001207-yjaiybwf	125	13	and	and	CC
cord-001207-yjaiybwf	125	14	their	-PRON-	PRP$
cord-001207-yjaiybwf	125	15	piglets	piglet	NNS
cord-001207-yjaiybwf	125	16	was	be	VBD
cord-001207-yjaiybwf	125	17	analyzed	analyze	VBN
cord-001207-yjaiybwf	125	18	by	by	IN
cord-001207-yjaiybwf	125	19	quantitative	quantitative	JJ
cord-001207-yjaiybwf	125	20	real	real	JJ
cord-001207-yjaiybwf	125	21	-	-	HYPH
cord-001207-yjaiybwf	125	22	time	time	NN
cord-001207-yjaiybwf	125	23	PCR	PCR	NNP
cord-001207-yjaiybwf	125	24	.	.	.
cord-001207-yjaiybwf	126	1	As	as	IN
cord-001207-yjaiybwf	126	2	shown	show	VBN
cord-001207-yjaiybwf	126	3	in	in	IN
cord-001207-yjaiybwf	126	4	Table	Table	NNP
cord-001207-yjaiybwf	126	5	1	1	CD
cord-001207-yjaiybwf	126	6	,	,	,
cord-001207-yjaiybwf	126	7	E.	E.	NNP
cord-001207-yjaiybwf	126	8	faecium	faecium	NNP
cord-001207-yjaiybwf	127	1	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	127	2	10415	10415	CD
cord-001207-yjaiybwf	127	3	was	be	VBD
cord-001207-yjaiybwf	127	4	not	not	RB
cord-001207-yjaiybwf	127	5	detected	detect	VBN
cord-001207-yjaiybwf	127	6	in	in	IN
cord-001207-yjaiybwf	127	7	the	the	DT
cord-001207-yjaiybwf	127	8	samples	sample	NNS
cord-001207-yjaiybwf	127	9	of	of	IN
cord-001207-yjaiybwf	127	10	the	the	DT
cord-001207-yjaiybwf	127	11	control	control	NN
cord-001207-yjaiybwf	127	12	group	group	NN
cord-001207-yjaiybwf	127	13	.	.	.
cord-001207-yjaiybwf	128	1	Also	also	RB
cord-001207-yjaiybwf	128	2	,	,	,
cord-001207-yjaiybwf	128	3	no	no	DT
cord-001207-yjaiybwf	128	4	E.	E.	NNP
cord-001207-yjaiybwf	128	5	faecium	faecium	NN
cord-001207-yjaiybwf	128	6	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	128	7	was	be	VBD
cord-001207-yjaiybwf	128	8	detectable	detectable	JJ
cord-001207-yjaiybwf	128	9	in	in	IN
cord-001207-yjaiybwf	128	10	the	the	DT
cord-001207-yjaiybwf	128	11	sample	sample	NN
cord-001207-yjaiybwf	128	12	taken	take	VBN
cord-001207-yjaiybwf	128	13	from	from	IN
cord-001207-yjaiybwf	128	14	the	the	DT
cord-001207-yjaiybwf	128	15	sows	sow	NNS
cord-001207-yjaiybwf	128	16	of	of	IN
cord-001207-yjaiybwf	128	17	the	the	DT
cord-001207-yjaiybwf	128	18	probiotic	probiotic	JJ
cord-001207-yjaiybwf	128	19	group	group	NN
cord-001207-yjaiybwf	128	20	immediately	immediately	RB
cord-001207-yjaiybwf	128	21	at	at	IN
cord-001207-yjaiybwf	128	22	the	the	DT
cord-001207-yjaiybwf	128	23	beginning	beginning	NN
cord-001207-yjaiybwf	128	24	of	of	IN
cord-001207-yjaiybwf	128	25	the	the	DT
cord-001207-yjaiybwf	128	26	experiment	experiment	NN
cord-001207-yjaiybwf	128	27	(	(	-LRB-
cord-001207-yjaiybwf	128	28	28	28	CD
cord-001207-yjaiybwf	128	29	day	day	NN
cord-001207-yjaiybwf	128	30	ante	ante	NNP
cord-001207-yjaiybwf	128	31	partum	partum	NNP
cord-001207-yjaiybwf	128	32	)	)	-RRB-
cord-001207-yjaiybwf	128	33	as	as	RB
cord-001207-yjaiybwf	128	34	well	well	RB
cord-001207-yjaiybwf	128	35	as	as	IN
cord-001207-yjaiybwf	128	36	in	in	IN
cord-001207-yjaiybwf	128	37	the	the	DT
cord-001207-yjaiybwf	128	38	samples	sample	NNS
cord-001207-yjaiybwf	128	39	from	from	IN
cord-001207-yjaiybwf	128	40	the	the	DT
cord-001207-yjaiybwf	128	41	12	12	CD
cord-001207-yjaiybwf	128	42	day	day	NN
cord-001207-yjaiybwf	128	43	-	-	HYPH
cord-001207-yjaiybwf	128	44	old	old	JJ
cord-001207-yjaiybwf	128	45	piglets	piglet	NNS
cord-001207-yjaiybwf	128	46	of	of	IN
cord-001207-yjaiybwf	128	47	this	this	DT
cord-001207-yjaiybwf	128	48	group	group	NN
cord-001207-yjaiybwf	128	49	,	,	,
cord-001207-yjaiybwf	128	50	which	which	WDT
cord-001207-yjaiybwf	128	51	were	be	VBD
cord-001207-yjaiybwf	128	52	still	still	RB
cord-001207-yjaiybwf	128	53	suckled	suckle	VBN
cord-001207-yjaiybwf	128	54	at	at	IN
cord-001207-yjaiybwf	128	55	this	this	DT
cord-001207-yjaiybwf	128	56	time	time	NN
cord-001207-yjaiybwf	128	57	-	-	HYPH
cord-001207-yjaiybwf	128	58	point	point	NN
cord-001207-yjaiybwf	128	59	.	.	.
cord-001207-yjaiybwf	129	1	Considerable	considerable	JJ
cord-001207-yjaiybwf	129	2	amounts	amount	NNS
cord-001207-yjaiybwf	129	3	of	of	IN
cord-001207-yjaiybwf	129	4	E.	E.	NNP
cord-001207-yjaiybwf	129	5	faecium	faecium	NN
cord-001207-yjaiybwf	129	6	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	129	7	10415	10415	CD
cord-001207-yjaiybwf	129	8	were	be	VBD
cord-001207-yjaiybwf	129	9	demonstrated	demonstrate	VBN
cord-001207-yjaiybwf	129	10	in	in	IN
cord-001207-yjaiybwf	129	11	the	the	DT
cord-001207-yjaiybwf	129	12	samples	sample	NNS
cord-001207-yjaiybwf	129	13	taken	take	VBN
cord-001207-yjaiybwf	129	14	from	from	IN
cord-001207-yjaiybwf	129	15	the	the	DT
cord-001207-yjaiybwf	129	16	sows	sow	NNS
cord-001207-yjaiybwf	129	17	at	at	IN
cord-001207-yjaiybwf	129	18	14	14	CD
cord-001207-yjaiybwf	129	19	day	day	NN
cord-001207-yjaiybwf	129	20	post	post	NN
cord-001207-yjaiybwf	129	21	partum	partum	NN
cord-001207-yjaiybwf	129	22	and	and	CC
cord-001207-yjaiybwf	129	23	from	from	IN
cord-001207-yjaiybwf	129	24	the	the	DT
cord-001207-yjaiybwf	129	25	54	54	CD
cord-001207-yjaiybwf	129	26	day	day	NN
cord-001207-yjaiybwf	129	27	-	-	HYPH
cord-001207-yjaiybwf	129	28	old	old	JJ
cord-001207-yjaiybwf	129	29	piglets	piglet	NNS
cord-001207-yjaiybwf	129	30	,	,	,
cord-001207-yjaiybwf	129	31	both	both	DT
cord-001207-yjaiybwf	129	32	belonging	belong	VBG
cord-001207-yjaiybwf	129	33	to	to	IN
cord-001207-yjaiybwf	129	34	the	the	DT
cord-001207-yjaiybwf	129	35	probiotic	probiotic	JJ
cord-001207-yjaiybwf	129	36	group	group	NN
cord-001207-yjaiybwf	129	37	.	.	.
cord-001207-yjaiybwf	130	1	The	the	DT
cord-001207-yjaiybwf	130	2	8	8	CD
cord-001207-yjaiybwf	130	3	pooled	pool	VBN
cord-001207-yjaiybwf	130	4	faecal	faecal	JJ
cord-001207-yjaiybwf	130	5	samples	sample	NNS
cord-001207-yjaiybwf	130	6	were	be	VBD
cord-001207-yjaiybwf	130	7	analyzed	analyze	VBN
cord-001207-yjaiybwf	130	8	by	by	IN
cord-001207-yjaiybwf	130	9	processcontrolled	processcontrolle	VBN
cord-001207-yjaiybwf	130	10	deep	deep	JJ
cord-001207-yjaiybwf	130	11	sequencing	sequencing	NN
cord-001207-yjaiybwf	130	12	.	.	.
cord-001207-yjaiybwf	131	1	In	in	IN
cord-001207-yjaiybwf	131	2	total	total	NN
cord-001207-yjaiybwf	131	3	,	,	,
cord-001207-yjaiybwf	131	4	390,650	390,650	CD
cord-001207-yjaiybwf	131	5	reads	read	NNS
cord-001207-yjaiybwf	131	6	were	be	VBD
cord-001207-yjaiybwf	131	7	generated	generate	VBN
cord-001207-yjaiybwf	131	8	,	,	,
cord-001207-yjaiybwf	131	9	with	with	IN
cord-001207-yjaiybwf	131	10	an	an	DT
cord-001207-yjaiybwf	131	11	average	average	NN
cord-001207-yjaiybwf	131	12	of	of	IN
cord-001207-yjaiybwf	131	13	48,831	48,831	CD
cord-001207-yjaiybwf	131	14	reads	read	NNS
cord-001207-yjaiybwf	131	15	per	per	IN
cord-001207-yjaiybwf	131	16	sample	sample	NN
cord-001207-yjaiybwf	131	17	.	.	.
cord-001207-yjaiybwf	132	1	The	the	DT
cord-001207-yjaiybwf	132	2	efficiency	efficiency	NN
cord-001207-yjaiybwf	132	3	of	of	IN
cord-001207-yjaiybwf	132	4	the	the	DT
cord-001207-yjaiybwf	132	5	whole	whole	JJ
cord-001207-yjaiybwf	132	6	method	method	NN
cord-001207-yjaiybwf	132	7	was	be	VBD
cord-001207-yjaiybwf	132	8	monitored	monitor	VBN
cord-001207-yjaiybwf	132	9	by	by	IN
cord-001207-yjaiybwf	132	10	a	a	DT
cord-001207-yjaiybwf	132	11	process	process	NN
cord-001207-yjaiybwf	132	12	control	control	NN
cord-001207-yjaiybwf	132	13	consisting	consist	VBG
cord-001207-yjaiybwf	132	14	of	of	IN
cord-001207-yjaiybwf	132	15	three	three	CD
cord-001207-yjaiybwf	132	16	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	132	17	,	,	,
cord-001207-yjaiybwf	132	18	which	which	WDT
cord-001207-yjaiybwf	132	19	were	be	VBD
cord-001207-yjaiybwf	132	20	added	add	VBN
cord-001207-yjaiybwf	132	21	in	in	IN
cord-001207-yjaiybwf	132	22	constant	constant	JJ
cord-001207-yjaiybwf	132	23	amounts	amount	NNS
cord-001207-yjaiybwf	132	24	to	to	IN
cord-001207-yjaiybwf	132	25	the	the	DT
cord-001207-yjaiybwf	132	26	samples	sample	NNS
cord-001207-yjaiybwf	132	27	.	.	.
cord-001207-yjaiybwf	133	1	In	in	IN
cord-001207-yjaiybwf	133	2	all	all	DT
cord-001207-yjaiybwf	133	3	samples	sample	NNS
cord-001207-yjaiybwf	133	4	the	the	DT
cord-001207-yjaiybwf	133	5	three	three	CD
cord-001207-yjaiybwf	133	6	test	test	NN
cord-001207-yjaiybwf	133	7	-	-	HYPH
cord-001207-yjaiybwf	133	8	phages	phage	NNS
cord-001207-yjaiybwf	133	9	could	could	MD
cord-001207-yjaiybwf	133	10	be	be	VB
cord-001207-yjaiybwf	133	11	detected	detect	VBN
cord-001207-yjaiybwf	133	12	representing	represent	VBG
cord-001207-yjaiybwf	133	13	0.9	0.9	CD
cord-001207-yjaiybwf	133	14	%	%	NN
cord-001207-yjaiybwf	133	15	to	to	IN
cord-001207-yjaiybwf	133	16	3.4	3.4	CD
cord-001207-yjaiybwf	133	17	%	%	NN
cord-001207-yjaiybwf	133	18	of	of	IN
cord-001207-yjaiybwf	133	19	all	all	DT
cord-001207-yjaiybwf	133	20	generated	generate	VBN
cord-001207-yjaiybwf	133	21	reads	read	NNS
cord-001207-yjaiybwf	133	22	.	.	.
cord-001207-yjaiybwf	134	1	The	the	DT
cord-001207-yjaiybwf	134	2	numbers	number	NNS
cord-001207-yjaiybwf	134	3	of	of	IN
cord-001207-yjaiybwf	134	4	totally	totally	RB
cord-001207-yjaiybwf	134	5	generated	generate	VBN
cord-001207-yjaiybwf	134	6	reads	read	NNS
cord-001207-yjaiybwf	134	7	,	,	,
cord-001207-yjaiybwf	134	8	test	test	NN
cord-001207-yjaiybwf	134	9	-	-	HYPH
cord-001207-yjaiybwf	134	10	phage	phage	NN
cord-001207-yjaiybwf	134	11	reads	read	NNS
cord-001207-yjaiybwf	134	12	and	and	CC
cord-001207-yjaiybwf	134	13	other	other	JJ
cord-001207-yjaiybwf	134	14	virus	virus	NN
cord-001207-yjaiybwf	134	15	reads	read	VBZ
cord-001207-yjaiybwf	134	16	is	be	VBZ
cord-001207-yjaiybwf	134	17	summarized	summarize	VBN
cord-001207-yjaiybwf	134	18	for	for	IN
cord-001207-yjaiybwf	134	19	the	the	DT
cord-001207-yjaiybwf	134	20	individual	individual	JJ
cord-001207-yjaiybwf	134	21	samples	sample	NNS
cord-001207-yjaiybwf	134	22	in	in	IN
cord-001207-yjaiybwf	134	23	Table	Table	NNP
cord-001207-yjaiybwf	134	24	2	2	CD
cord-001207-yjaiybwf	134	25	.	.	.
cord-001207-yjaiybwf	135	1	The	the	DT
cord-001207-yjaiybwf	135	2	number	number	NN
cord-001207-yjaiybwf	135	3	of	of	IN
cord-001207-yjaiybwf	135	4	the	the	DT
cord-001207-yjaiybwf	135	5	test	test	NN
cord-001207-yjaiybwf	135	6	-	-	HYPH
cord-001207-yjaiybwf	135	7	phage	phage	NN
cord-001207-yjaiybwf	135	8	reads	read	NNS
cord-001207-yjaiybwf	135	9	in	in	IN
cord-001207-yjaiybwf	135	10	relation	relation	NN
cord-001207-yjaiybwf	135	11	to	to	IN
cord-001207-yjaiybwf	135	12	the	the	DT
cord-001207-yjaiybwf	135	13	total	total	JJ
cord-001207-yjaiybwf	135	14	virus	virus	NN
cord-001207-yjaiybwf	135	15	reads	read	VBZ
cord-001207-yjaiybwf	135	16	ranged	range	VBD
cord-001207-yjaiybwf	135	17	from	from	IN
cord-001207-yjaiybwf	135	18	3.8	3.8	CD
cord-001207-yjaiybwf	135	19	%	%	NN
cord-001207-yjaiybwf	135	20	to	to	IN
cord-001207-yjaiybwf	135	21	24.4	24.4	CD
cord-001207-yjaiybwf	135	22	%	%	NN
cord-001207-yjaiybwf	135	23	and	and	CC
cord-001207-yjaiybwf	135	24	is	be	VBZ
cord-001207-yjaiybwf	135	25	shown	show	VBN
cord-001207-yjaiybwf	135	26	in	in	IN
cord-001207-yjaiybwf	135	27	Figure	figure	NN
cord-001207-yjaiybwf	135	28	2	2	CD
cord-001207-yjaiybwf	135	29	.	.	.
cord-001207-yjaiybwf	136	1	Using	use	VBG
cord-001207-yjaiybwf	136	2	a	a	DT
cord-001207-yjaiybwf	136	3	cut	cut	VB
cord-001207-yjaiybwf	136	4	-	-	HYPH
cord-001207-yjaiybwf	136	5	off	off	RP
cord-001207-yjaiybwf	136	6	E	e	NN
cord-001207-yjaiybwf	136	7	-	-	NN
cord-001207-yjaiybwf	136	8	value	value	NN
cord-001207-yjaiybwf	136	9	of	of	IN
cord-001207-yjaiybwf	136	10	,	,	,
cord-001207-yjaiybwf	136	11	=	=	SYM
cord-001207-yjaiybwf	136	12	10	10	CD
cord-001207-yjaiybwf	136	13	24	24	CD
cord-001207-yjaiybwf	136	14	for	for	IN
cord-001207-yjaiybwf	136	15	the	the	DT
cord-001207-yjaiybwf	136	16	BLASTx	BLASTx	NNS
cord-001207-yjaiybwf	136	17	homology	homology	NN
cord-001207-yjaiybwf	136	18	search	search	NN
cord-001207-yjaiybwf	136	19	of	of	IN
cord-001207-yjaiybwf	136	20	the	the	DT
cord-001207-yjaiybwf	136	21	sequences	sequence	NNS
cord-001207-yjaiybwf	136	22	,	,	,
cord-001207-yjaiybwf	136	23	the	the	DT
cord-001207-yjaiybwf	136	24	viral	viral	JJ
cord-001207-yjaiybwf	136	25	reads	read	NNS
cord-001207-yjaiybwf	136	26	could	could	MD
cord-001207-yjaiybwf	136	27	be	be	VB
cord-001207-yjaiybwf	136	28	assigned	assign	VBN
cord-001207-yjaiybwf	136	29	to	to	IN
cord-001207-yjaiybwf	136	30	36	36	CD
cord-001207-yjaiybwf	136	31	known	know	VBN
cord-001207-yjaiybwf	136	32	virus	virus	NN
cord-001207-yjaiybwf	136	33	families	family	NNS
cord-001207-yjaiybwf	136	34	.	.	.
cord-001207-yjaiybwf	137	1	Only	only	RB
cord-001207-yjaiybwf	137	2	10	10	CD
cord-001207-yjaiybwf	137	3	of	of	IN
cord-001207-yjaiybwf	137	4	these	these	DT
cord-001207-yjaiybwf	137	5	families	family	NNS
cord-001207-yjaiybwf	137	6	dominated	dominate	VBD
cord-001207-yjaiybwf	137	7	the	the	DT
cord-001207-yjaiybwf	137	8	faecal	faecal	JJ
cord-001207-yjaiybwf	137	9	viromes	virome	NNS
cord-001207-yjaiybwf	137	10	representing	represent	VBG
cord-001207-yjaiybwf	137	11	more	more	JJR
cord-001207-yjaiybwf	137	12	than	than	IN
cord-001207-yjaiybwf	137	13	1	1	CD
cord-001207-yjaiybwf	137	14	%	%	NN
cord-001207-yjaiybwf	137	15	in	in	IN
cord-001207-yjaiybwf	137	16	at	at	RB
cord-001207-yjaiybwf	137	17	least	least	RBS
cord-001207-yjaiybwf	137	18	one	one	CD
cord-001207-yjaiybwf	137	19	of	of	IN
cord-001207-yjaiybwf	137	20	the	the	DT
cord-001207-yjaiybwf	137	21	samples	sample	NNS
cord-001207-yjaiybwf	137	22	.	.	.
cord-001207-yjaiybwf	138	1	As	as	IN
cord-001207-yjaiybwf	138	2	shown	show	VBN
cord-001207-yjaiybwf	138	3	in	in	IN
cord-001207-yjaiybwf	138	4	Figure	Figure	NNP
cord-001207-yjaiybwf	138	5	3	3	CD
cord-001207-yjaiybwf	138	6	and	and	CC
cord-001207-yjaiybwf	138	7	Table	Table	NNP
cord-001207-yjaiybwf	138	8	S1	S1	NNP
cord-001207-yjaiybwf	138	9	,	,	,
cord-001207-yjaiybwf	138	10	the	the	DT
cord-001207-yjaiybwf	138	11	composition	composition	NN
cord-001207-yjaiybwf	138	12	of	of	IN
cord-001207-yjaiybwf	138	13	the	the	DT
cord-001207-yjaiybwf	138	14	faecal	faecal	JJ
cord-001207-yjaiybwf	138	15	viromes	virome	NNS
cord-001207-yjaiybwf	138	16	according	accord	VBG
cord-001207-yjaiybwf	138	17	to	to	IN
cord-001207-yjaiybwf	138	18	virus	virus	NN
cord-001207-yjaiybwf	138	19	families	family	NNS
cord-001207-yjaiybwf	138	20	varied	vary	VBN
cord-001207-yjaiybwf	138	21	remarkably	remarkably	RB
cord-001207-yjaiybwf	138	22	among	among	IN
cord-001207-yjaiybwf	138	23	the	the	DT
cord-001207-yjaiybwf	138	24	samples	sample	NNS
cord-001207-yjaiybwf	138	25	.	.	.
cord-001207-yjaiybwf	139	1	A	a	DT
cord-001207-yjaiybwf	139	2	grouping	grouping	NN
cord-001207-yjaiybwf	139	3	of	of	IN
cord-001207-yjaiybwf	139	4	the	the	DT
cord-001207-yjaiybwf	139	5	virus	virus	NN
cord-001207-yjaiybwf	139	6	families	family	NNS
cord-001207-yjaiybwf	139	7	according	accord	VBG
cord-001207-yjaiybwf	139	8	to	to	IN
cord-001207-yjaiybwf	139	9	the	the	DT
cord-001207-yjaiybwf	139	10	taxonomic	taxonomic	JJ
cord-001207-yjaiybwf	139	11	kingdom	kingdom	NN
cord-001207-yjaiybwf	139	12	of	of	IN
cord-001207-yjaiybwf	139	13	hosts	host	NNS
cord-001207-yjaiybwf	139	14	of	of	IN
cord-001207-yjaiybwf	139	15	the	the	DT
cord-001207-yjaiybwf	139	16	contained	contain	VBN
cord-001207-yjaiybwf	139	17	viruses	virus	NNS
cord-001207-yjaiybwf	139	18	revealed	reveal	VBD
cord-001207-yjaiybwf	139	19	that	that	IN
cord-001207-yjaiybwf	139	20	the	the	DT
cord-001207-yjaiybwf	139	21	main	main	JJ
cord-001207-yjaiybwf	139	22	detected	detected	JJ
cord-001207-yjaiybwf	139	23	groups	group	NNS
cord-001207-yjaiybwf	139	24	were	be	VBD
cord-001207-yjaiybwf	139	25	mammalian	mammalian	JJ
cord-001207-yjaiybwf	139	26	viruses	virus	NNS
cord-001207-yjaiybwf	139	27	(	(	-LRB-
cord-001207-yjaiybwf	139	28	colored	color	VBN
cord-001207-yjaiybwf	139	29	red	red	NN
cord-001207-yjaiybwf	139	30	in	in	IN
cord-001207-yjaiybwf	139	31	Fig	Fig	NNP
cord-001207-yjaiybwf	139	32	.	.	.
cord-001207-yjaiybwf	139	33	3	3	CD
cord-001207-yjaiybwf	139	34	)	)	-RRB-
cord-001207-yjaiybwf	139	35	and	and	CC
cord-001207-yjaiybwf	139	36	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	139	37	(	(	-LRB-
cord-001207-yjaiybwf	139	38	colored	color	VBN
cord-001207-yjaiybwf	139	39	blue	blue	NN
cord-001207-yjaiybwf	139	40	in	in	IN
cord-001207-yjaiybwf	139	41	Fig	Fig	NNP
cord-001207-yjaiybwf	139	42	.	.	.
cord-001207-yjaiybwf	139	43	3	3	CD
cord-001207-yjaiybwf	139	44	)	)	-RRB-
cord-001207-yjaiybwf	139	45	.	.	.
cord-001207-yjaiybwf	140	1	In	in	IN
cord-001207-yjaiybwf	140	2	contrast	contrast	NN
cord-001207-yjaiybwf	140	3	,	,	,
cord-001207-yjaiybwf	140	4	viruses	virus	NNS
cord-001207-yjaiybwf	140	5	from	from	IN
cord-001207-yjaiybwf	140	6	other	other	JJ
cord-001207-yjaiybwf	140	7	hosts	host	NNS
cord-001207-yjaiybwf	140	8	(	(	-LRB-
cord-001207-yjaiybwf	140	9	insects	insect	NNS
cord-001207-yjaiybwf	140	10	,	,	,
cord-001207-yjaiybwf	140	11	plants	plant	NNS
cord-001207-yjaiybwf	140	12	,	,	,
cord-001207-yjaiybwf	140	13	amphibians	amphibian	NNS
cord-001207-yjaiybwf	140	14	and	and	CC
cord-001207-yjaiybwf	140	15	fungi	fungus	NNS
cord-001207-yjaiybwf	140	16	)	)	-RRB-
cord-001207-yjaiybwf	140	17	ranked	rank	VBD
cord-001207-yjaiybwf	140	18	together	together	RB
cord-001207-yjaiybwf	140	19	between	between	IN
cord-001207-yjaiybwf	140	20	0.2	0.2	CD
cord-001207-yjaiybwf	140	21	%	%	NN
cord-001207-yjaiybwf	140	22	and	and	CC
cord-001207-yjaiybwf	140	23	3.4	3.4	CD
cord-001207-yjaiybwf	140	24	%	%	NN
cord-001207-yjaiybwf	140	25	only	only	RB
cord-001207-yjaiybwf	140	26	.	.	.
cord-001207-yjaiybwf	141	1	A	a	DT
cord-001207-yjaiybwf	141	2	closer	close	JJR
cord-001207-yjaiybwf	141	3	inspection	inspection	NN
cord-001207-yjaiybwf	141	4	of	of	IN
cord-001207-yjaiybwf	141	5	the	the	DT
cord-001207-yjaiybwf	141	6	proportion	proportion	NN
cord-001207-yjaiybwf	141	7	of	of	IN
cord-001207-yjaiybwf	141	8	the	the	DT
cord-001207-yjaiybwf	141	9	read	read	VBN
cord-001207-yjaiybwf	141	10	numbers	number	NNS
cord-001207-yjaiybwf	141	11	from	from	IN
cord-001207-yjaiybwf	141	12	mammalian	mammalian	JJ
cord-001207-yjaiybwf	141	13	viruses	virus	NNS
cord-001207-yjaiybwf	141	14	compared	compare	VBN
cord-001207-yjaiybwf	141	15	to	to	IN
cord-001207-yjaiybwf	141	16	that	that	DT
cord-001207-yjaiybwf	141	17	from	from	IN
cord-001207-yjaiybwf	141	18	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	141	19	revealed	reveal	VBD
cord-001207-yjaiybwf	141	20	marked	marked	JJ
cord-001207-yjaiybwf	141	21	differences	difference	NNS
cord-001207-yjaiybwf	141	22	between	between	IN
cord-001207-yjaiybwf	141	23	the	the	DT
cord-001207-yjaiybwf	141	24	samples	sample	NNS
cord-001207-yjaiybwf	141	25	derived	derive	VBN
cord-001207-yjaiybwf	141	26	from	from	IN
cord-001207-yjaiybwf	141	27	different	different	JJ
cord-001207-yjaiybwf	141	28	age	age	NN
cord-001207-yjaiybwf	141	29	groups	group	NNS
cord-001207-yjaiybwf	141	30	.	.	.
cord-001207-yjaiybwf	142	1	In	in	IN
cord-001207-yjaiybwf	142	2	the	the	DT
cord-001207-yjaiybwf	142	3	youngest	young	JJS
cord-001207-yjaiybwf	142	4	piglet	piglet	NN
cord-001207-yjaiybwf	142	5	group	group	NN
cord-001207-yjaiybwf	142	6	(	(	-LRB-
cord-001207-yjaiybwf	142	7	12	12	CD
cord-001207-yjaiybwf	142	8	days	day	NNS
cord-001207-yjaiybwf	142	9	of	of	IN
cord-001207-yjaiybwf	142	10	age	age	NN
cord-001207-yjaiybwf	142	11	)	)	-RRB-
cord-001207-yjaiybwf	142	12	,	,	,
cord-001207-yjaiybwf	142	13	the	the	DT
cord-001207-yjaiybwf	142	14	main	main	JJ
cord-001207-yjaiybwf	142	15	fraction	fraction	NN
cord-001207-yjaiybwf	142	16	consisted	consist	VBD
cord-001207-yjaiybwf	142	17	of	of	IN
cord-001207-yjaiybwf	142	18	mammalian	mammalian	JJ
cord-001207-yjaiybwf	142	19	viruses	virus	NNS
cord-001207-yjaiybwf	142	20	with	with	IN
cord-001207-yjaiybwf	142	21	55	55	CD
cord-001207-yjaiybwf	142	22	%	%	NN
cord-001207-yjaiybwf	142	23	(	(	-LRB-
cord-001207-yjaiybwf	142	24	control	control	NN
cord-001207-yjaiybwf	142	25	group	group	NN
cord-001207-yjaiybwf	142	26	)	)	-RRB-
cord-001207-yjaiybwf	142	27	and	and	CC
cord-001207-yjaiybwf	142	28	77	77	CD
cord-001207-yjaiybwf	142	29	%	%	NN
cord-001207-yjaiybwf	142	30	(	(	-LRB-
cord-001207-yjaiybwf	142	31	probiotic	probiotic	JJ
cord-001207-yjaiybwf	142	32	group	group	NN
cord-001207-yjaiybwf	142	33	)	)	-RRB-
cord-001207-yjaiybwf	142	34	.	.	.
cord-001207-yjaiybwf	143	1	In	in	IN
cord-001207-yjaiybwf	143	2	the	the	DT
cord-001207-yjaiybwf	143	3	group	group	NN
cord-001207-yjaiybwf	143	4	of	of	IN
cord-001207-yjaiybwf	143	5	54	54	CD
cord-001207-yjaiybwf	143	6	dayold	dayold	NN
cord-001207-yjaiybwf	143	7	piglets	piglet	NNS
cord-001207-yjaiybwf	143	8	,	,	,
cord-001207-yjaiybwf	143	9	the	the	DT
cord-001207-yjaiybwf	143	10	proportion	proportion	NN
cord-001207-yjaiybwf	143	11	of	of	IN
cord-001207-yjaiybwf	143	12	mammalian	mammalian	JJ
cord-001207-yjaiybwf	143	13	viruses	virus	NNS
cord-001207-yjaiybwf	143	14	was	be	VBD
cord-001207-yjaiybwf	143	15	reduced	reduce	VBN
cord-001207-yjaiybwf	143	16	to	to	IN
cord-001207-yjaiybwf	143	17	24	24	CD
cord-001207-yjaiybwf	143	18	%	%	NN
cord-001207-yjaiybwf	143	19	(	(	-LRB-
cord-001207-yjaiybwf	143	20	control	control	NN
cord-001207-yjaiybwf	143	21	group	group	NN
cord-001207-yjaiybwf	143	22	)	)	-RRB-
cord-001207-yjaiybwf	143	23	and	and	CC
cord-001207-yjaiybwf	143	24	30	30	CD
cord-001207-yjaiybwf	143	25	%	%	NN
cord-001207-yjaiybwf	143	26	(	(	-LRB-
cord-001207-yjaiybwf	143	27	probiotic	probiotic	JJ
cord-001207-yjaiybwf	143	28	group	group	NN
cord-001207-yjaiybwf	143	29	)	)	-RRB-
cord-001207-yjaiybwf	143	30	.	.	.
cord-001207-yjaiybwf	144	1	Within	within	IN
cord-001207-yjaiybwf	144	2	the	the	DT
cord-001207-yjaiybwf	144	3	four	four	CD
cord-001207-yjaiybwf	144	4	groups	group	NNS
cord-001207-yjaiybwf	144	5	of	of	IN
cord-001207-yjaiybwf	144	6	the	the	DT
cord-001207-yjaiybwf	144	7	sows	sow	NNS
cord-001207-yjaiybwf	144	8	(	(	-LRB-
cord-001207-yjaiybwf	144	9	one	one	CD
cord-001207-yjaiybwf	144	10	year	year	NN
cord-001207-yjaiybwf	144	11	old	old	JJ
cord-001207-yjaiybwf	144	12	)	)	-RRB-
cord-001207-yjaiybwf	145	1	the	the	DT
cord-001207-yjaiybwf	145	2	amount	amount	NN
cord-001207-yjaiybwf	145	3	of	of	IN
cord-001207-yjaiybwf	145	4	mammalian	mammalian	JJ
cord-001207-yjaiybwf	145	5	viruses	virus	NNS
cord-001207-yjaiybwf	145	6	ranged	range	VBD
cord-001207-yjaiybwf	145	7	from	from	IN
cord-001207-yjaiybwf	145	8	8	8	CD
cord-001207-yjaiybwf	145	9	%	%	NN
cord-001207-yjaiybwf	145	10	to	to	TO
cord-001207-yjaiybwf	145	11	12	12	CD
cord-001207-yjaiybwf	145	12	%	%	NN
cord-001207-yjaiybwf	145	13	.	.	.
cord-001207-yjaiybwf	146	1	In	in	IN
cord-001207-yjaiybwf	146	2	contrast	contrast	NN
cord-001207-yjaiybwf	146	3	to	to	IN
cord-001207-yjaiybwf	146	4	those	those	DT
cord-001207-yjaiybwf	146	5	findings	finding	NNS
cord-001207-yjaiybwf	146	6	,	,	,
cord-001207-yjaiybwf	146	7	the	the	DT
cord-001207-yjaiybwf	146	8	proportion	proportion	NN
cord-001207-yjaiybwf	146	9	of	of	IN
cord-001207-yjaiybwf	146	10	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	146	11	increased	increase	VBD
cord-001207-yjaiybwf	146	12	with	with	IN
cord-001207-yjaiybwf	146	13	the	the	DT
cord-001207-yjaiybwf	146	14	age	age	NN
cord-001207-yjaiybwf	146	15	of	of	IN
cord-001207-yjaiybwf	146	16	the	the	DT
cord-001207-yjaiybwf	146	17	pigs	pig	NNS
cord-001207-yjaiybwf	146	18	.	.	.
cord-001207-yjaiybwf	147	1	In	in	IN
cord-001207-yjaiybwf	147	2	the	the	DT
cord-001207-yjaiybwf	147	3	12	12	CD
cord-001207-yjaiybwf	147	4	day	day	NN
cord-001207-yjaiybwf	147	5	-	-	HYPH
cord-001207-yjaiybwf	147	6	old	old	JJ
cord-001207-yjaiybwf	147	7	piglets	piglet	NNS
cord-001207-yjaiybwf	147	8	,	,	,
cord-001207-yjaiybwf	147	9	44	44	CD
cord-001207-yjaiybwf	147	10	%	%	NN
cord-001207-yjaiybwf	147	11	(	(	-LRB-
cord-001207-yjaiybwf	147	12	control	control	NN
cord-001207-yjaiybwf	147	13	group	group	NN
cord-001207-yjaiybwf	147	14	)	)	-RRB-
cord-001207-yjaiybwf	147	15	and	and	CC
cord-001207-yjaiybwf	147	16	22	22	CD
cord-001207-yjaiybwf	147	17	%	%	NN
cord-001207-yjaiybwf	147	18	(	(	-LRB-
cord-001207-yjaiybwf	147	19	probiotic	probiotic	JJ
cord-001207-yjaiybwf	147	20	group	group	NN
cord-001207-yjaiybwf	147	21	)	)	-RRB-
cord-001207-yjaiybwf	147	22	of	of	IN
cord-001207-yjaiybwf	147	23	the	the	DT
cord-001207-yjaiybwf	147	24	reads	read	NNS
cord-001207-yjaiybwf	147	25	relate	relate	VBP
cord-001207-yjaiybwf	147	26	to	to	IN
cord-001207-yjaiybwf	147	27	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	147	28	.	.	.
cord-001207-yjaiybwf	148	1	The	the	DT
cord-001207-yjaiybwf	148	2	percentage	percentage	NN
cord-001207-yjaiybwf	148	3	of	of	IN
cord-001207-yjaiybwf	148	4	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	148	5	increases	increase	VBZ
cord-001207-yjaiybwf	148	6	in	in	IN
cord-001207-yjaiybwf	148	7	the	the	DT
cord-001207-yjaiybwf	148	8	54	54	CD
cord-001207-yjaiybwf	148	9	day	day	NN
cord-001207-yjaiybwf	148	10	-	-	HYPH
cord-001207-yjaiybwf	148	11	old	old	JJ
cord-001207-yjaiybwf	148	12	piglets	piglet	NNS
cord-001207-yjaiybwf	148	13	to	to	IN
cord-001207-yjaiybwf	148	14	68	68	CD
cord-001207-yjaiybwf	148	15	%	%	NN
cord-001207-yjaiybwf	148	16	(	(	-LRB-
cord-001207-yjaiybwf	148	17	control	control	NN
cord-001207-yjaiybwf	148	18	group	group	NN
cord-001207-yjaiybwf	148	19	)	)	-RRB-
cord-001207-yjaiybwf	148	20	and	and	CC
cord-001207-yjaiybwf	148	21	72	72	CD
cord-001207-yjaiybwf	148	22	%	%	NN
cord-001207-yjaiybwf	148	23	(	(	-LRB-
cord-001207-yjaiybwf	148	24	probiotic	probiotic	JJ
cord-001207-yjaiybwf	148	25	group	group	NN
cord-001207-yjaiybwf	148	26	)	)	-RRB-
cord-001207-yjaiybwf	148	27	,	,	,
cord-001207-yjaiybwf	148	28	whereas	whereas	IN
cord-001207-yjaiybwf	148	29	approximately	approximately	RB
cord-001207-yjaiybwf	148	30	90	90	CD
cord-001207-yjaiybwf	148	31	%	%	NN
cord-001207-yjaiybwf	148	32	of	of	IN
cord-001207-yjaiybwf	148	33	the	the	DT
cord-001207-yjaiybwf	148	34	virus	virus	NN
cord-001207-yjaiybwf	148	35	reads	read	VBZ
cord-001207-yjaiybwf	148	36	belong	belong	VBP
cord-001207-yjaiybwf	148	37	to	to	IN
cord-001207-yjaiybwf	148	38	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	148	39	in	in	IN
cord-001207-yjaiybwf	148	40	the	the	DT
cord-001207-yjaiybwf	148	41	four	four	CD
cord-001207-yjaiybwf	148	42	sow	sow	NN
cord-001207-yjaiybwf	148	43	groups	group	NNS
cord-001207-yjaiybwf	148	44	.	.	.
cord-001207-yjaiybwf	149	1	No	no	DT
cord-001207-yjaiybwf	149	2	differences	difference	NNS
cord-001207-yjaiybwf	149	3	in	in	IN
cord-001207-yjaiybwf	149	4	the	the	DT
cord-001207-yjaiybwf	149	5	general	general	JJ
cord-001207-yjaiybwf	149	6	composition	composition	NN
cord-001207-yjaiybwf	149	7	of	of	IN
cord-001207-yjaiybwf	149	8	virus	virus	NN
cord-001207-yjaiybwf	149	9	families	family	NNS
cord-001207-yjaiybwf	149	10	or	or	CC
cord-001207-yjaiybwf	149	11	the	the	DT
cord-001207-yjaiybwf	149	12	respective	respective	JJ
cord-001207-yjaiybwf	149	13	hosts	host	NNS
cord-001207-yjaiybwf	149	14	were	be	VBD
cord-001207-yjaiybwf	149	15	evident	evident	JJ
cord-001207-yjaiybwf	149	16	,	,	,
cord-001207-yjaiybwf	149	17	when	when	WRB
cord-001207-yjaiybwf	149	18	the	the	DT
cord-001207-yjaiybwf	149	19	probiotic	probiotic	JJ
cord-001207-yjaiybwf	149	20	group	group	NN
cord-001207-yjaiybwf	149	21	was	be	VBD
cord-001207-yjaiybwf	149	22	compared	compare	VBN
cord-001207-yjaiybwf	149	23	to	to	IN
cord-001207-yjaiybwf	149	24	the	the	DT
cord-001207-yjaiybwf	149	25	control	control	NN
cord-001207-yjaiybwf	149	26	group	group	NN
cord-001207-yjaiybwf	149	27	.	.	.
cord-001207-yjaiybwf	150	1	In	in	IN
cord-001207-yjaiybwf	150	2	overall	overall	JJ
cord-001207-yjaiybwf	150	3	,	,	,
cord-001207-yjaiybwf	150	4	sequences	sequence	NNS
cord-001207-yjaiybwf	150	5	with	with	IN
cord-001207-yjaiybwf	150	6	significant	significant	JJ
cord-001207-yjaiybwf	150	7	identities	identity	NNS
cord-001207-yjaiybwf	150	8	to	to	IN
cord-001207-yjaiybwf	150	9	524	524	CD
cord-001207-yjaiybwf	150	10	known	know	VBN
cord-001207-yjaiybwf	150	11	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	150	12	species	specie	NNS
cord-001207-yjaiybwf	150	13	were	be	VBD
cord-001207-yjaiybwf	150	14	detected	detect	VBN
cord-001207-yjaiybwf	150	15	.	.	.
cord-001207-yjaiybwf	151	1	The	the	DT
cord-001207-yjaiybwf	151	2	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	151	3	most	most	RBS
cord-001207-yjaiybwf	151	4	abundant	abundant	JJ
cord-001207-yjaiybwf	151	5	in	in	IN
cord-001207-yjaiybwf	151	6	the	the	DT
cord-001207-yjaiybwf	151	7	eight	eight	CD
cord-001207-yjaiybwf	151	8	samples	sample	NNS
cord-001207-yjaiybwf	151	9	are	be	VBP
cord-001207-yjaiybwf	151	10	shown	show	VBN
cord-001207-yjaiybwf	151	11	in	in	IN
cord-001207-yjaiybwf	151	12	Figure	Figure	NNP
cord-001207-yjaiybwf	151	13	4	4	CD
cord-001207-yjaiybwf	151	14	and	and	CC
cord-001207-yjaiybwf	151	15	Table	Table	NNP
cord-001207-yjaiybwf	151	16	 	 	_SP
cord-001207-yjaiybwf	151	17	S2	S2	NNP
cord-001207-yjaiybwf	151	18	.	.	.
cord-001207-yjaiybwf	152	1	In	in	IN
cord-001207-yjaiybwf	152	2	all	all	DT
cord-001207-yjaiybwf	152	3	cases	case	NNS
cord-001207-yjaiybwf	152	4	,	,	,
cord-001207-yjaiybwf	152	5	the	the	DT
cord-001207-yjaiybwf	152	6	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	152	7	population	population	NN
cord-001207-yjaiybwf	152	8	is	be	VBZ
cord-001207-yjaiybwf	152	9	dominated	dominate	VBN
cord-001207-yjaiybwf	152	10	by	by	IN
cord-001207-yjaiybwf	152	11	9	9	CD
cord-001207-yjaiybwf	152	12	to	to	TO
cord-001207-yjaiybwf	152	13	16	16	CD
cord-001207-yjaiybwf	152	14	species	specie	NNS
cord-001207-yjaiybwf	152	15	,	,	,
cord-001207-yjaiybwf	152	16	which	which	WDT
cord-001207-yjaiybwf	152	17	represent	represent	VBP
cord-001207-yjaiybwf	152	18	76	76	CD
cord-001207-yjaiybwf	152	19	-	-	SYM
cord-001207-yjaiybwf	152	20	90	90	CD
cord-001207-yjaiybwf	152	21	%	%	NN
cord-001207-yjaiybwf	152	22	of	of	IN
cord-001207-yjaiybwf	152	23	all	all	DT
cord-001207-yjaiybwf	152	24	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	152	25	reads	read	VBZ
cord-001207-yjaiybwf	152	26	of	of	IN
cord-001207-yjaiybwf	152	27	the	the	DT
cord-001207-yjaiybwf	152	28	respective	respective	JJ
cord-001207-yjaiybwf	152	29	sample	sample	NN
cord-001207-yjaiybwf	152	30	.	.	.
cord-001207-yjaiybwf	153	1	The	the	DT
cord-001207-yjaiybwf	153	2	most	most	RBS
cord-001207-yjaiybwf	153	3	abundant	abundant	JJ
cord-001207-yjaiybwf	153	4	phages	phage	NNS
cord-001207-yjaiybwf	153	5	as	as	IN
cord-001207-yjaiybwf	153	6	identified	identify	VBN
cord-001207-yjaiybwf	153	7	by	by	IN
cord-001207-yjaiybwf	153	8	the	the	DT
cord-001207-yjaiybwf	153	9	highest	high	JJS
cord-001207-yjaiybwf	153	10	number	number	NN
cord-001207-yjaiybwf	153	11	of	of	IN
cord-001207-yjaiybwf	153	12	reads	read	NNS
cord-001207-yjaiybwf	153	13	with	with	IN
cord-001207-yjaiybwf	153	14	sequence	sequence	NN
cord-001207-yjaiybwf	153	15	identities	identity	NNS
cord-001207-yjaiybwf	153	16	to	to	IN
cord-001207-yjaiybwf	153	17	known	know	VBN
cord-001207-yjaiybwf	153	18	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	153	19	genomes	genome	NNS
cord-001207-yjaiybwf	153	20	are	be	VBP
cord-001207-yjaiybwf	153	21	Lactococcus	Lactococcus	NNP
cord-001207-yjaiybwf	153	22	phage	phage	NN
cord-001207-yjaiybwf	153	23	1706	1706	CD
cord-001207-yjaiybwf	153	24	,	,	,
cord-001207-yjaiybwf	153	25	Dragonflyassociated	Dragonflyassociated	NNP
cord-001207-yjaiybwf	153	26	microphage	microphage	NN
cord-001207-yjaiybwf	153	27	1	1	CD
cord-001207-yjaiybwf	153	28	,	,	,
cord-001207-yjaiybwf	153	29	Chlamydia	Chlamydia	NNP
cord-001207-yjaiybwf	153	30	phages	phage	NNS
cord-001207-yjaiybwf	153	31	4	4	CD
cord-001207-yjaiybwf	153	32	,	,	,
cord-001207-yjaiybwf	153	33	Chp1	Chp1	NNP
cord-001207-yjaiybwf	153	34	and	and	CC
cord-001207-yjaiybwf	153	35	Chp2	Chp2	NNP
cord-001207-yjaiybwf	153	36	,	,	,
cord-001207-yjaiybwf	153	37	Bdellovibrio	Bdellovibrio	NNP
cord-001207-yjaiybwf	153	38	phage	phage	NN
cord-001207-yjaiybwf	153	39	phiMH2	phimh2	CD
cord-001207-yjaiybwf	153	40	K	K	NNP
cord-001207-yjaiybwf	153	41	,	,	,
cord-001207-yjaiybwf	153	42	Spiroplasma	Spiroplasma	NNP
cord-001207-yjaiybwf	153	43	phage	phage	NN
cord-001207-yjaiybwf	153	44	4	4	CD
cord-001207-yjaiybwf	153	45	,	,	,
cord-001207-yjaiybwf	153	46	Microvirus	Microvirus	NNP
cord-001207-yjaiybwf	153	47	CA82	CA82	NNP
cord-001207-yjaiybwf	153	48	as	as	RB
cord-001207-yjaiybwf	153	49	well	well	RB
cord-001207-yjaiybwf	153	50	as	as	IN
cord-001207-yjaiybwf	153	51	Enterococcous	Enterococcous	NNP
cord-001207-yjaiybwf	153	52	phages	phage	NNS
cord-001207-yjaiybwf	153	53	EFAP-1	EFAP-1	NNP
cord-001207-yjaiybwf	153	54	and	and	CC
cord-001207-yjaiybwf	154	1	EFRM31	EFRM31	NNP
cord-001207-yjaiybwf	154	2	.	.	.
cord-001207-yjaiybwf	155	1	A	a	DT
cord-001207-yjaiybwf	155	2	comparison	comparison	NN
cord-001207-yjaiybwf	155	3	between	between	IN
cord-001207-yjaiybwf	155	4	the	the	DT
cord-001207-yjaiybwf	155	5	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	155	6	populations	population	NNS
cord-001207-yjaiybwf	155	7	of	of	IN
cord-001207-yjaiybwf	155	8	the	the	DT
cord-001207-yjaiybwf	155	9	specific	specific	JJ
cord-001207-yjaiybwf	155	10	samples	sample	NNS
cord-001207-yjaiybwf	155	11	indicated	indicate	VBD
cord-001207-yjaiybwf	155	12	that	that	IN
cord-001207-yjaiybwf	155	13	many	many	JJ
cord-001207-yjaiybwf	155	14	of	of	IN
cord-001207-yjaiybwf	155	15	the	the	DT
cord-001207-yjaiybwf	155	16	most	most	RBS
cord-001207-yjaiybwf	155	17	abundant	abundant	JJ
cord-001207-yjaiybwf	155	18	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	155	19	species	specie	NNS
cord-001207-yjaiybwf	155	20	are	be	VBP
cord-001207-yjaiybwf	155	21	present	present	JJ
cord-001207-yjaiybwf	155	22	in	in	IN
cord-001207-yjaiybwf	155	23	all	all	DT
cord-001207-yjaiybwf	155	24	samples	sample	NNS
cord-001207-yjaiybwf	155	25	,	,	,
cord-001207-yjaiybwf	155	26	however	however	RB
cord-001207-yjaiybwf	155	27	,	,	,
cord-001207-yjaiybwf	155	28	with	with	IN
cord-001207-yjaiybwf	155	29	different	different	JJ
cord-001207-yjaiybwf	155	30	relative	relative	JJ
cord-001207-yjaiybwf	155	31	frequency	frequency	NN
cord-001207-yjaiybwf	155	32	.	.	.
cord-001207-yjaiybwf	156	1	Apart	apart	RB
cord-001207-yjaiybwf	156	2	from	from	IN
cord-001207-yjaiybwf	156	3	that	that	DT
cord-001207-yjaiybwf	156	4	,	,	,
cord-001207-yjaiybwf	156	5	the	the	DT
cord-001207-yjaiybwf	156	6	composition	composition	NN
cord-001207-yjaiybwf	156	7	of	of	IN
cord-001207-yjaiybwf	156	8	the	the	DT
cord-001207-yjaiybwf	156	9	faecal	faecal	JJ
cord-001207-yjaiybwf	156	10	virome	virome	NN
cord-001207-yjaiybwf	156	11	with	with	IN
cord-001207-yjaiybwf	156	12	regard	regard	NN
cord-001207-yjaiybwf	156	13	to	to	IN
cord-001207-yjaiybwf	156	14	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	156	15	species	specie	NNS
cord-001207-yjaiybwf	156	16	was	be	VBD
cord-001207-yjaiybwf	156	17	relatively	relatively	RB
cord-001207-yjaiybwf	156	18	variable	variable	JJ
cord-001207-yjaiybwf	156	19	between	between	IN
cord-001207-yjaiybwf	156	20	the	the	DT
cord-001207-yjaiybwf	156	21	samples	sample	NNS
cord-001207-yjaiybwf	156	22	and	and	CC
cord-001207-yjaiybwf	156	23	every	every	DT
cord-001207-yjaiybwf	156	24	sample	sample	NN
cord-001207-yjaiybwf	156	25	contained	contain	VBD
cord-001207-yjaiybwf	156	26	its	-PRON-	PRP$
cord-001207-yjaiybwf	156	27	unique	unique	JJ
cord-001207-yjaiybwf	156	28	collection	collection	NN
cord-001207-yjaiybwf	156	29	of	of	IN
cord-001207-yjaiybwf	156	30	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	156	31	.	.	.
cord-001207-yjaiybwf	157	1	No	no	DT
cord-001207-yjaiybwf	157	2	consistent	consistent	JJ
cord-001207-yjaiybwf	157	3	differences	difference	NNS
cord-001207-yjaiybwf	157	4	between	between	IN
cord-001207-yjaiybwf	157	5	age	age	NN
cord-001207-yjaiybwf	157	6	groups	group	NNS
cord-001207-yjaiybwf	157	7	and	and	CC
cord-001207-yjaiybwf	157	8	feeding	feed	VBG
cord-001207-yjaiybwf	157	9	groups	group	NNS
cord-001207-yjaiybwf	157	10	were	be	VBD
cord-001207-yjaiybwf	157	11	obvious	obvious	JJ
cord-001207-yjaiybwf	157	12	when	when	WRB
cord-001207-yjaiybwf	157	13	the	the	DT
cord-001207-yjaiybwf	157	14	abundance	abundance	NN
cord-001207-yjaiybwf	157	15	of	of	IN
cord-001207-yjaiybwf	157	16	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	157	17	species	specie	NNS
cord-001207-yjaiybwf	157	18	was	be	VBD
cord-001207-yjaiybwf	157	19	analyzed	analyze	VBN
cord-001207-yjaiybwf	157	20	.	.	.
cord-001207-yjaiybwf	158	1	Interestingly	interestingly	RB
cord-001207-yjaiybwf	158	2	,	,	,
cord-001207-yjaiybwf	158	3	the	the	DT
cord-001207-yjaiybwf	158	4	sample	sample	NN
cord-001207-yjaiybwf	158	5	taken	take	VBN
cord-001207-yjaiybwf	158	6	at	at	IN
cord-001207-yjaiybwf	158	7	day	day	NN
cord-001207-yjaiybwf	158	8	14	14	CD
cord-001207-yjaiybwf	158	9	post	post	NN
cord-001207-yjaiybwf	158	10	partum	partum	NN
cord-001207-yjaiybwf	158	11	from	from	IN
cord-001207-yjaiybwf	158	12	the	the	DT
cord-001207-yjaiybwf	158	13	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	158	14	faecium	faecium	NN
cord-001207-yjaiybwf	158	15	-	-	HYPH
cord-001207-yjaiybwf	158	16	fed	fed	NNP
cord-001207-yjaiybwf	158	17	sows	sow	NNS
cord-001207-yjaiybwf	158	18	contained	contain	VBD
cord-001207-yjaiybwf	158	19	relatively	relatively	RB
cord-001207-yjaiybwf	158	20	high	high	JJ
cord-001207-yjaiybwf	158	21	amounts	amount	NNS
cord-001207-yjaiybwf	158	22	of	of	IN
cord-001207-yjaiybwf	158	23	the	the	DT
cord-001207-yjaiybwf	158	24	Enterococcous	Enterococcous	NNP
cord-001207-yjaiybwf	158	25	phages	phage	NNS
cord-001207-yjaiybwf	158	26	EFAP-1	EFAP-1	NNP
cord-001207-yjaiybwf	158	27	(	(	-LRB-
cord-001207-yjaiybwf	158	28	10.8	10.8	CD
cord-001207-yjaiybwf	158	29	%	%	NN
cord-001207-yjaiybwf	158	30	)	)	-RRB-
cord-001207-yjaiybwf	158	31	and	and	CC
cord-001207-yjaiybwf	158	32	EFRM31	EFRM31	NNP
cord-001207-yjaiybwf	158	33	(	(	-LRB-
cord-001207-yjaiybwf	158	34	7.0	7.0	CD
cord-001207-yjaiybwf	158	35	%	%	NN
cord-001207-yjaiybwf	158	36	)	)	-RRB-
cord-001207-yjaiybwf	158	37	,	,	,
cord-001207-yjaiybwf	158	38	which	which	WDT
cord-001207-yjaiybwf	158	39	were	be	VBD
cord-001207-yjaiybwf	158	40	only	only	RB
cord-001207-yjaiybwf	158	41	sporadically	sporadically	RB
cord-001207-yjaiybwf	158	42	detected	detect	VBN
cord-001207-yjaiybwf	158	43	in	in	IN
cord-001207-yjaiybwf	158	44	the	the	DT
cord-001207-yjaiybwf	158	45	other	other	JJ
cord-001207-yjaiybwf	158	46	groups	group	NNS
cord-001207-yjaiybwf	158	47	(	(	-LRB-
cord-001207-yjaiybwf	158	48	0.02	0.02	CD
cord-001207-yjaiybwf	158	49	%	%	NN
cord-001207-yjaiybwf	158	50	to	to	TO
cord-001207-yjaiybwf	158	51	0.6	0.6	CD
cord-001207-yjaiybwf	158	52	%	%	NN
cord-001207-yjaiybwf	158	53	)	)	-RRB-
cord-001207-yjaiybwf	158	54	.	.	.
cord-001207-yjaiybwf	159	1	By	by	IN
cord-001207-yjaiybwf	159	2	analysis	analysis	NN
cord-001207-yjaiybwf	159	3	of	of	IN
cord-001207-yjaiybwf	159	4	all	all	DT
cord-001207-yjaiybwf	159	5	virus	virus	NN
cord-001207-yjaiybwf	159	6	reads	read	VBZ
cord-001207-yjaiybwf	159	7	excluding	exclude	VBG
cord-001207-yjaiybwf	159	8	the	the	DT
cord-001207-yjaiybwf	159	9	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	159	10	,	,	,
cord-001207-yjaiybwf	159	11	sequences	sequence	NNS
cord-001207-yjaiybwf	159	12	with	with	IN
cord-001207-yjaiybwf	159	13	significant	significant	JJ
cord-001207-yjaiybwf	159	14	identities	identity	NNS
cord-001207-yjaiybwf	159	15	to	to	IN
cord-001207-yjaiybwf	159	16	205	205	CD
cord-001207-yjaiybwf	159	17	known	know	VBN
cord-001207-yjaiybwf	159	18	virus	virus	NN
cord-001207-yjaiybwf	159	19	species	specie	NNS
cord-001207-yjaiybwf	159	20	were	be	VBD
cord-001207-yjaiybwf	159	21	detected	detect	VBN
cord-001207-yjaiybwf	159	22	.	.	.
cord-001207-yjaiybwf	160	1	Among	among	IN
cord-001207-yjaiybwf	160	2	that	that	DT
cord-001207-yjaiybwf	160	3	,	,	,
cord-001207-yjaiybwf	160	4	92.9	92.9	CD
cord-001207-yjaiybwf	160	5	%	%	NN
cord-001207-yjaiybwf	160	6	of	of	IN
cord-001207-yjaiybwf	160	7	the	the	DT
cord-001207-yjaiybwf	160	8	sequences	sequence	NNS
cord-001207-yjaiybwf	160	9	belonged	belong	VBD
cord-001207-yjaiybwf	160	10	to	to	IN
cord-001207-yjaiybwf	160	11	viruses	virus	NNS
cord-001207-yjaiybwf	160	12	infecting	infect	VBG
cord-001207-yjaiybwf	160	13	mammalian	mammalian	JJ
cord-001207-yjaiybwf	160	14	animals	animal	NNS
cord-001207-yjaiybwf	160	15	.	.	.
cord-001207-yjaiybwf	161	1	This	this	DT
cord-001207-yjaiybwf	161	2	percentage	percentage	NN
cord-001207-yjaiybwf	161	3	of	of	IN
cord-001207-yjaiybwf	161	4	mam-	mam-	JJ
cord-001207-yjaiybwf	161	5	malian	malian	JJ
cord-001207-yjaiybwf	161	6	viruses	virus	NNS
cord-001207-yjaiybwf	161	7	decreased	decrease	VBD
cord-001207-yjaiybwf	161	8	with	with	IN
cord-001207-yjaiybwf	161	9	age	age	NN
cord-001207-yjaiybwf	161	10	,	,	,
cord-001207-yjaiybwf	161	11	with	with	IN
cord-001207-yjaiybwf	161	12	an	an	DT
cord-001207-yjaiybwf	161	13	average	average	NN
cord-001207-yjaiybwf	161	14	of	of	IN
cord-001207-yjaiybwf	161	15	99.1	99.1	CD
cord-001207-yjaiybwf	161	16	%	%	NN
cord-001207-yjaiybwf	161	17	in	in	IN
cord-001207-yjaiybwf	161	18	the	the	DT
cord-001207-yjaiybwf	161	19	12	12	CD
cord-001207-yjaiybwf	161	20	day	day	NN
cord-001207-yjaiybwf	161	21	-	-	HYPH
cord-001207-yjaiybwf	161	22	old	old	JJ
cord-001207-yjaiybwf	161	23	piglet	piglet	NN
cord-001207-yjaiybwf	161	24	group	group	NN
cord-001207-yjaiybwf	161	25	,	,	,
cord-001207-yjaiybwf	161	26	91.8	91.8	CD
cord-001207-yjaiybwf	161	27	%	%	NN
cord-001207-yjaiybwf	161	28	in	in	IN
cord-001207-yjaiybwf	161	29	the	the	DT
cord-001207-yjaiybwf	161	30	54	54	CD
cord-001207-yjaiybwf	161	31	day	day	NN
cord-001207-yjaiybwf	161	32	-	-	HYPH
cord-001207-yjaiybwf	161	33	old	old	JJ
cord-001207-yjaiybwf	161	34	piglet	piglet	NN
cord-001207-yjaiybwf	161	35	group	group	NN
cord-001207-yjaiybwf	161	36	and	and	CC
cord-001207-yjaiybwf	161	37	79.0	79.0	CD
cord-001207-yjaiybwf	161	38	%	%	NN
cord-001207-yjaiybwf	161	39	in	in	IN
cord-001207-yjaiybwf	161	40	the	the	DT
cord-001207-yjaiybwf	161	41	sows	sow	NNS
cord-001207-yjaiybwf	161	42	.	.	.
cord-001207-yjaiybwf	162	1	The	the	DT
cord-001207-yjaiybwf	162	2	relative	relative	JJ
cord-001207-yjaiybwf	162	3	percentage	percentage	NN
cord-001207-yjaiybwf	162	4	of	of	IN
cord-001207-yjaiybwf	162	5	the	the	DT
cord-001207-yjaiybwf	162	6	most	most	RBS
cord-001207-yjaiybwf	162	7	abundant	abundant	JJ
cord-001207-yjaiybwf	162	8	mammalian	mammalian	JJ
cord-001207-yjaiybwf	162	9	virus	virus	NN
cord-001207-yjaiybwf	162	10	genera	genera	VBP
cord-001207-yjaiybwf	162	11	in	in	IN
cord-001207-yjaiybwf	162	12	the	the	DT
cord-001207-yjaiybwf	162	13	eight	eight	CD
cord-001207-yjaiybwf	162	14	samples	sample	NNS
cord-001207-yjaiybwf	162	15	is	be	VBZ
cord-001207-yjaiybwf	162	16	shown	show	VBN
cord-001207-yjaiybwf	162	17	in	in	IN
cord-001207-yjaiybwf	162	18	Figure	Figure	NNP
cord-001207-yjaiybwf	162	19	5	5	CD
cord-001207-yjaiybwf	162	20	and	and	CC
cord-001207-yjaiybwf	162	21	dant	dant	NNP
cord-001207-yjaiybwf	162	22	mammalian	mammalian	JJ
cord-001207-yjaiybwf	162	23	viruses	virus	NNS
cord-001207-yjaiybwf	162	24	.	.	.
cord-001207-yjaiybwf	163	1	Among	among	IN
cord-001207-yjaiybwf	163	2	the	the	DT
cord-001207-yjaiybwf	163	3	'	'	``
cord-001207-yjaiybwf	163	4	'	'	``
cord-001207-yjaiybwf	163	5	circovirus	circovirus	JJ
cord-001207-yjaiybwf	163	6	-	-	HYPH
cord-001207-yjaiybwf	163	7	like	like	JJ
cord-001207-yjaiybwf	163	8	'	'	''
cord-001207-yjaiybwf	163	9	'	'	''
cord-001207-yjaiybwf	163	10	viruses	virus	NNS
cord-001207-yjaiybwf	163	11	,	,	,
cord-001207-yjaiybwf	163	12	sequences	sequence	NNS
cord-001207-yjaiybwf	163	13	with	with	IN
cord-001207-yjaiybwf	163	14	highest	high	JJS
cord-001207-yjaiybwf	163	15	identities	identity	NNS
cord-001207-yjaiybwf	163	16	to	to	IN
cord-001207-yjaiybwf	163	17	the	the	DT
cord-001207-yjaiybwf	163	18	viruses	virus	NNS
cord-001207-yjaiybwf	163	19	CB	CB	NNP
cord-001207-yjaiybwf	164	1	-A	-A	:
cord-001207-yjaiybwf	164	2	and	and	CC
cord-001207-yjaiybwf	164	3	RW	RW	NNP
cord-001207-yjaiybwf	164	4	-	-	HYPH
cord-001207-yjaiybwf	164	5	A	a	NN
cord-001207-yjaiybwf	164	6	were	be	VBD
cord-001207-yjaiybwf	164	7	most	most	RBS
cord-001207-yjaiybwf	164	8	often	often	RB
cord-001207-yjaiybwf	164	9	detected	detect	VBN
cord-001207-yjaiybwf	164	10	.	.	.
cord-001207-yjaiybwf	165	1	No	no	DT
cord-001207-yjaiybwf	165	2	consistent	consistent	JJ
cord-001207-yjaiybwf	165	3	differences	difference	NNS
cord-001207-yjaiybwf	165	4	were	be	VBD
cord-001207-yjaiybwf	165	5	obvious	obvious	JJ
cord-001207-yjaiybwf	165	6	between	between	IN
cord-001207-yjaiybwf	165	7	the	the	DT
cord-001207-yjaiybwf	165	8	group	group	NN
cord-001207-yjaiybwf	165	9	fed	feed	VBN
cord-001207-yjaiybwf	165	10	with	with	IN
cord-001207-yjaiybwf	165	11	the	the	DT
cord-001207-yjaiybwf	165	12	probiotic	probiotic	JJ
cord-001207-yjaiybwf	165	13	bacterium	bacterium	NN
cord-001207-yjaiybwf	165	14	and	and	CC
cord-001207-yjaiybwf	165	15	the	the	DT
cord-001207-yjaiybwf	165	16	control	control	NN
cord-001207-yjaiybwf	165	17	group	group	NN
cord-001207-yjaiybwf	165	18	.	.	.
cord-001207-yjaiybwf	166	1	However	however	RB
cord-001207-yjaiybwf	166	2	,	,	,
cord-001207-yjaiybwf	166	3	a	a	DT
cord-001207-yjaiybwf	166	4	relatively	relatively	RB
cord-001207-yjaiybwf	166	5	high	high	JJ
cord-001207-yjaiybwf	166	6	proportion	proportion	NN
cord-001207-yjaiybwf	166	7	of	of	IN
cord-001207-yjaiybwf	166	8	mamastrovirus	mamastrovirus	NNP
cord-001207-yjaiybwf	166	9	sequences	sequence	NNS
cord-001207-yjaiybwf	166	10	(	(	-LRB-
cord-001207-yjaiybwf	166	11	16.3	16.3	CD
cord-001207-yjaiybwf	166	12	%	%	NN
cord-001207-yjaiybwf	166	13	)	)	-RRB-
cord-001207-yjaiybwf	166	14	was	be	VBD
cord-001207-yjaiybwf	166	15	detected	detect	VBN
cord-001207-yjaiybwf	166	16	in	in	IN
cord-001207-yjaiybwf	166	17	the	the	DT
cord-001207-yjaiybwf	166	18	sample	sample	NN
cord-001207-yjaiybwf	166	19	derived	derive	VBN
cord-001207-yjaiybwf	166	20	from	from	IN
cord-001207-yjaiybwf	166	21	the	the	DT
cord-001207-yjaiybwf	166	22	54	54	CD
cord-001207-yjaiybwf	166	23	day	day	NN
cord-001207-yjaiybwf	166	24	-	-	HYPH
cord-001207-yjaiybwf	166	25	old	old	JJ
cord-001207-yjaiybwf	166	26	piglets	piglet	NNS
cord-001207-yjaiybwf	166	27	;	;	:
cord-001207-yjaiybwf	166	28	while	while	IN
cord-001207-yjaiybwf	166	29	this	this	DT
cord-001207-yjaiybwf	166	30	virus	virus	NN
cord-001207-yjaiybwf	166	31	was	be	VBD
cord-001207-yjaiybwf	166	32	not	not	RB
cord-001207-yjaiybwf	166	33	detected	detect	VBN
cord-001207-yjaiybwf	166	34	in	in	IN
cord-001207-yjaiybwf	166	35	the	the	DT
cord-001207-yjaiybwf	166	36	other	other	JJ
cord-001207-yjaiybwf	166	37	groups	group	NNS
cord-001207-yjaiybwf	166	38	(	(	-LRB-
cord-001207-yjaiybwf	166	39	less	less	JJR
cord-001207-yjaiybwf	166	40	than	than	IN
cord-001207-yjaiybwf	166	41	2	2	CD
cord-001207-yjaiybwf	166	42	reads	read	NNS
cord-001207-yjaiybwf	166	43	per	per	IN
cord-001207-yjaiybwf	166	44	sample	sample	NN
cord-001207-yjaiybwf	166	45	)	)	-RRB-
cord-001207-yjaiybwf	166	46	.	.	.
cord-001207-yjaiybwf	167	1	The	the	DT
cord-001207-yjaiybwf	167	2	calculation	calculation	NN
cord-001207-yjaiybwf	167	3	of	of	IN
cord-001207-yjaiybwf	167	4	the	the	DT
cord-001207-yjaiybwf	167	5	Shannon	Shannon	NNP
cord-001207-yjaiybwf	167	6	index	index	NN
cord-001207-yjaiybwf	167	7	was	be	VBD
cord-001207-yjaiybwf	167	8	used	use	VBN
cord-001207-yjaiybwf	167	9	to	to	TO
cord-001207-yjaiybwf	167	10	assess	assess	VB
cord-001207-yjaiybwf	167	11	the	the	DT
cord-001207-yjaiybwf	167	12	diversity	diversity	NN
cord-001207-yjaiybwf	167	13	of	of	IN
cord-001207-yjaiybwf	167	14	the	the	DT
cord-001207-yjaiybwf	167	15	sequences	sequence	NNS
cord-001207-yjaiybwf	167	16	detected	detect	VBN
cord-001207-yjaiybwf	167	17	in	in	IN
cord-001207-yjaiybwf	167	18	the	the	DT
cord-001207-yjaiybwf	167	19	specific	specific	JJ
cord-001207-yjaiybwf	167	20	samples	sample	NNS
cord-001207-yjaiybwf	167	21	(	(	-LRB-
cord-001207-yjaiybwf	167	22	Table	Table	NNP
cord-001207-yjaiybwf	167	23	3	3	CD
cord-001207-yjaiybwf	167	24	)	)	-RRB-
cord-001207-yjaiybwf	167	25	.	.	.
cord-001207-yjaiybwf	168	1	Generally	generally	RB
cord-001207-yjaiybwf	168	2	,	,	,
cord-001207-yjaiybwf	168	3	comparison	comparison	NN
cord-001207-yjaiybwf	168	4	of	of	IN
cord-001207-yjaiybwf	168	5	Shannon	Shannon	NNP
cord-001207-yjaiybwf	168	6	indexes	index	NNS
cord-001207-yjaiybwf	168	7	between	between	IN
cord-001207-yjaiybwf	168	8	piglets	piglet	NNS
cord-001207-yjaiybwf	168	9	and	and	CC
cord-001207-yjaiybwf	168	10	sows	sow	NNS
cord-001207-yjaiybwf	168	11	indicated	indicate	VBD
cord-001207-yjaiybwf	168	12	that	that	IN
cord-001207-yjaiybwf	168	13	the	the	DT
cord-001207-yjaiybwf	168	14	diversity	diversity	NN
cord-001207-yjaiybwf	168	15	increased	increase	VBD
cord-001207-yjaiybwf	168	16	with	with	IN
cord-001207-yjaiybwf	168	17	age	age	NN
cord-001207-yjaiybwf	168	18	.	.	.
cord-001207-yjaiybwf	169	1	When	when	WRB
cord-001207-yjaiybwf	169	2	only	only	RB
cord-001207-yjaiybwf	169	3	the	the	DT
cord-001207-yjaiybwf	169	4	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	169	5	sequences	sequence	NNS
cord-001207-yjaiybwf	169	6	were	be	VBD
cord-001207-yjaiybwf	169	7	analysed	analyse	VBN
cord-001207-yjaiybwf	169	8	,	,	,
cord-001207-yjaiybwf	169	9	the	the	DT
cord-001207-yjaiybwf	169	10	average	average	JJ
cord-001207-yjaiybwf	169	11	Shannon	Shannon	NNP
cord-001207-yjaiybwf	169	12	index	index	NN
cord-001207-yjaiybwf	169	13	of	of	IN
cord-001207-yjaiybwf	169	14	the	the	DT
cord-001207-yjaiybwf	169	15	piglet	piglet	NN
cord-001207-yjaiybwf	169	16	groups	group	NNS
cord-001207-yjaiybwf	169	17	was	be	VBD
cord-001207-yjaiybwf	169	18	1.3	1.3	CD
cord-001207-yjaiybwf	169	19	and	and	CC
cord-001207-yjaiybwf	169	20	that	that	DT
cord-001207-yjaiybwf	169	21	of	of	IN
cord-001207-yjaiybwf	169	22	the	the	DT
cord-001207-yjaiybwf	169	23	sows	sow	NNS
cord-001207-yjaiybwf	169	24	1.7	1.7	CD
cord-001207-yjaiybwf	169	25	.	.	.
cord-001207-yjaiybwf	170	1	For	for	IN
cord-001207-yjaiybwf	170	2	the	the	DT
cord-001207-yjaiybwf	170	3	mammalian	mammalian	JJ
cord-001207-yjaiybwf	170	4	virus	virus	NN
cord-001207-yjaiybwf	170	5	sequences	sequence	NNS
cord-001207-yjaiybwf	170	6	,	,	,
cord-001207-yjaiybwf	170	7	the	the	DT
cord-001207-yjaiybwf	170	8	average	average	JJ
cord-001207-yjaiybwf	170	9	Shannon	Shannon	NNP
cord-001207-yjaiybwf	170	10	index	index	NN
cord-001207-yjaiybwf	170	11	for	for	IN
cord-001207-yjaiybwf	170	12	the	the	DT
cord-001207-yjaiybwf	170	13	piglets	piglet	NNS
cord-001207-yjaiybwf	170	14	was	be	VBD
cord-001207-yjaiybwf	170	15	1.9	1.9	CD
cord-001207-yjaiybwf	170	16	and	and	CC
cord-001207-yjaiybwf	170	17	that	that	IN
cord-001207-yjaiybwf	170	18	for	for	IN
cord-001207-yjaiybwf	170	19	the	the	DT
cord-001207-yjaiybwf	170	20	sows	sow	NNS
cord-001207-yjaiybwf	170	21	3.0	3.0	CD
cord-001207-yjaiybwf	170	22	.	.	.
cord-001207-yjaiybwf	171	1	Calculation	calculation	NN
cord-001207-yjaiybwf	171	2	of	of	IN
cord-001207-yjaiybwf	171	3	Bray	Bray	NNP
cord-001207-yjaiybwf	171	4	-	-	HYPH
cord-001207-yjaiybwf	171	5	Curtis	Curtis	NNP
cord-001207-yjaiybwf	171	6	distances	distance	NNS
cord-001207-yjaiybwf	171	7	determined	determine	VBD
cord-001207-yjaiybwf	171	8	similarities	similarity	NNS
cord-001207-yjaiybwf	171	9	of	of	IN
cord-001207-yjaiybwf	171	10	the	the	DT
cord-001207-yjaiybwf	171	11	faecal	faecal	JJ
cord-001207-yjaiybwf	171	12	viromes	virome	NNS
cord-001207-yjaiybwf	171	13	detected	detect	VBN
cord-001207-yjaiybwf	171	14	in	in	IN
cord-001207-yjaiybwf	171	15	the	the	DT
cord-001207-yjaiybwf	171	16	specific	specific	JJ
cord-001207-yjaiybwf	171	17	samples	sample	NNS
cord-001207-yjaiybwf	171	18	.	.	.
cord-001207-yjaiybwf	172	1	Figure	figure	NN
cord-001207-yjaiybwf	172	2	6	6	CD
cord-001207-yjaiybwf	172	3	illustrates	illustrate	NNS
cord-001207-yjaiybwf	172	4	clustering	clustering	NN
cord-001207-yjaiybwf	172	5	of	of	IN
cord-001207-yjaiybwf	172	6	samples	sample	NNS
cord-001207-yjaiybwf	172	7	on	on	IN
cord-001207-yjaiybwf	172	8	the	the	DT
cord-001207-yjaiybwf	172	9	basis	basis	NN
cord-001207-yjaiybwf	172	10	of	of	IN
cord-001207-yjaiybwf	172	11	Bray	Bray	NNP
cord-001207-yjaiybwf	172	12	Curtis	Curtis	NNP
cord-001207-yjaiybwf	172	13	distance	distance	NN
cord-001207-yjaiybwf	172	14	calculated	calculate	VBN
cord-001207-yjaiybwf	172	15	by	by	IN
cord-001207-yjaiybwf	172	16	abundances	abundance	NNS
cord-001207-yjaiybwf	172	17	of	of	IN
cord-001207-yjaiybwf	172	18	species	species	NN
cord-001207-yjaiybwf	172	19	-	-	HYPH
cord-001207-yjaiybwf	172	20	specific	specific	JJ
cord-001207-yjaiybwf	172	21	subsets	subset	NNS
cord-001207-yjaiybwf	172	22	.	.	.
cord-001207-yjaiybwf	173	1	As	as	IN
cord-001207-yjaiybwf	173	2	shown	show	VBN
cord-001207-yjaiybwf	173	3	in	in	IN
cord-001207-yjaiybwf	173	4	the	the	DT
cord-001207-yjaiybwf	173	5	dendrogram	dendrogram	NN
cord-001207-yjaiybwf	173	6	based	base	VBN
cord-001207-yjaiybwf	173	7	on	on	IN
cord-001207-yjaiybwf	173	8	abundances	abundance	NNS
cord-001207-yjaiybwf	173	9	of	of	IN
cord-001207-yjaiybwf	173	10	all	all	DT
cord-001207-yjaiybwf	173	11	virus	virus	NN
cord-001207-yjaiybwf	173	12	species	species	NN
cord-001207-yjaiybwf	173	13	(	(	-LRB-
cord-001207-yjaiybwf	173	14	including	include	VBG
cord-001207-yjaiybwf	173	15	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	173	16	)	)	-RRB-
cord-001207-yjaiybwf	173	17	,	,	,
cord-001207-yjaiybwf	173	18	a	a	DT
cord-001207-yjaiybwf	173	19	grouping	grouping	NN
cord-001207-yjaiybwf	173	20	according	accord	VBG
cord-001207-yjaiybwf	173	21	to	to	IN
cord-001207-yjaiybwf	173	22	age	age	NN
cord-001207-yjaiybwf	173	23	is	be	VBZ
cord-001207-yjaiybwf	173	24	evident	evident	JJ
cord-001207-yjaiybwf	173	25	(	(	-LRB-
cord-001207-yjaiybwf	173	26	Fig	fig	NN
cord-001207-yjaiybwf	173	27	.	.	.
cord-001207-yjaiybwf	173	28	6A	6a	CD
cord-001207-yjaiybwf	173	29	)	)	-RRB-
cord-001207-yjaiybwf	173	30	.	.	.
cord-001207-yjaiybwf	174	1	The	the	DT
cord-001207-yjaiybwf	174	2	two	two	CD
cord-001207-yjaiybwf	174	3	samples	sample	NNS
cord-001207-yjaiybwf	174	4	taken	take	VBN
cord-001207-yjaiybwf	174	5	from	from	IN
cord-001207-yjaiybwf	174	6	the	the	DT
cord-001207-yjaiybwf	174	7	12	12	CD
cord-001207-yjaiybwf	174	8	day	day	NN
cord-001207-yjaiybwf	174	9	-	-	HYPH
cord-001207-yjaiybwf	174	10	old	old	JJ
cord-001207-yjaiybwf	174	11	piglets	piglet	NNS
cord-001207-yjaiybwf	174	12	cluster	cluster	NN
cord-001207-yjaiybwf	174	13	closely	closely	RB
cord-001207-yjaiybwf	174	14	together	together	RB
cord-001207-yjaiybwf	174	15	and	and	CC
cord-001207-yjaiybwf	174	16	are	be	VBP
cord-001207-yjaiybwf	174	17	separated	separate	VBN
cord-001207-yjaiybwf	174	18	from	from	IN
cord-001207-yjaiybwf	174	19	the	the	DT
cord-001207-yjaiybwf	174	20	other	other	JJ
cord-001207-yjaiybwf	174	21	samples	sample	NNS
cord-001207-yjaiybwf	174	22	.	.	.
cord-001207-yjaiybwf	175	1	Among	among	IN
cord-001207-yjaiybwf	175	2	these	these	DT
cord-001207-yjaiybwf	175	3	other	other	JJ
cord-001207-yjaiybwf	175	4	samples	sample	NNS
cord-001207-yjaiybwf	175	5	,	,	,
cord-001207-yjaiybwf	175	6	the	the	DT
cord-001207-yjaiybwf	175	7	two	two	CD
cord-001207-yjaiybwf	175	8	samples	sample	NNS
cord-001207-yjaiybwf	175	9	taken	take	VBN
cord-001207-yjaiybwf	175	10	from	from	IN
cord-001207-yjaiybwf	175	11	the	the	DT
cord-001207-yjaiybwf	175	12	54	54	CD
cord-001207-yjaiybwf	175	13	day	day	NN
cord-001207-yjaiybwf	175	14	-	-	HYPH
cord-001207-yjaiybwf	175	15	old	old	JJ
cord-001207-yjaiybwf	175	16	piglets	piglet	NNS
cord-001207-yjaiybwf	175	17	form	form	VBP
cord-001207-yjaiybwf	175	18	one	one	CD
cord-001207-yjaiybwf	175	19	separate	separate	JJ
cord-001207-yjaiybwf	175	20	branch	branch	NN
cord-001207-yjaiybwf	175	21	,	,	,
cord-001207-yjaiybwf	175	22	whereas	whereas	IN
cord-001207-yjaiybwf	175	23	the	the	DT
cord-001207-yjaiybwf	175	24	four	four	CD
cord-001207-yjaiybwf	175	25	samples	sample	NNS
cord-001207-yjaiybwf	175	26	of	of	IN
cord-001207-yjaiybwf	175	27	the	the	DT
cord-001207-yjaiybwf	175	28	sows	sow	NNS
cord-001207-yjaiybwf	175	29	are	be	VBP
cord-001207-yjaiybwf	175	30	all	all	DT
cord-001207-yjaiybwf	175	31	contained	contain	VBN
cord-001207-yjaiybwf	175	32	in	in	IN
cord-001207-yjaiybwf	175	33	the	the	DT
cord-001207-yjaiybwf	175	34	other	other	JJ
cord-001207-yjaiybwf	175	35	branch	branch	NN
cord-001207-yjaiybwf	175	36	.	.	.
cord-001207-yjaiybwf	176	1	A	a	DT
cord-001207-yjaiybwf	176	2	branching	branching	NN
cord-001207-yjaiybwf	176	3	according	accord	VBG
cord-001207-yjaiybwf	176	4	to	to	IN
cord-001207-yjaiybwf	176	5	the	the	DT
cord-001207-yjaiybwf	176	6	feeding	feeding	NN
cord-001207-yjaiybwf	176	7	group	group	NN
cord-001207-yjaiybwf	176	8	is	be	VBZ
cord-001207-yjaiybwf	176	9	not	not	RB
cord-001207-yjaiybwf	176	10	evident	evident	JJ
cord-001207-yjaiybwf	176	11	from	from	IN
cord-001207-yjaiybwf	176	12	this	this	DT
cord-001207-yjaiybwf	176	13	dendrogram	dendrogram	NN
cord-001207-yjaiybwf	176	14	.	.	.
cord-001207-yjaiybwf	177	1	The	the	DT
cord-001207-yjaiybwf	177	2	same	same	JJ
cord-001207-yjaiybwf	177	3	grouping	grouping	NN
cord-001207-yjaiybwf	177	4	is	be	VBZ
cord-001207-yjaiybwf	177	5	evident	evident	JJ
cord-001207-yjaiybwf	177	6	,	,	,
cord-001207-yjaiybwf	177	7	when	when	WRB
cord-001207-yjaiybwf	177	8	only	only	RB
cord-001207-yjaiybwf	177	9	the	the	DT
cord-001207-yjaiybwf	177	10	mammalian	mammalian	JJ
cord-001207-yjaiybwf	177	11	virus	virus	NN
cord-001207-yjaiybwf	177	12	sequences	sequence	NNS
cord-001207-yjaiybwf	177	13	are	be	VBP
cord-001207-yjaiybwf	177	14	analysed	analyse	VBN
cord-001207-yjaiybwf	178	1	(	(	-LRB-
cord-001207-yjaiybwf	178	2	Fig	Fig	NNP
cord-001207-yjaiybwf	178	3	.	.	.
cord-001207-yjaiybwf	178	4	6B	6b	CD
cord-001207-yjaiybwf	178	5	)	)	-RRB-
cord-001207-yjaiybwf	178	6	.	.	.
cord-001207-yjaiybwf	179	1	The	the	DT
cord-001207-yjaiybwf	179	2	analysis	analysis	NN
cord-001207-yjaiybwf	179	3	of	of	IN
cord-001207-yjaiybwf	179	4	the	the	DT
cord-001207-yjaiybwf	179	5	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	179	6	shows	show	VBZ
cord-001207-yjaiybwf	179	7	no	no	DT
cord-001207-yjaiybwf	179	8	evident	evident	JJ
cord-001207-yjaiybwf	179	9	grouping	grouping	NN
cord-001207-yjaiybwf	179	10	according	accord	VBG
cord-001207-yjaiybwf	179	11	to	to	IN
cord-001207-yjaiybwf	179	12	age	age	NN
cord-001207-yjaiybwf	179	13	or	or	CC
cord-001207-yjaiybwf	179	14	feeding	feeding	NN
cord-001207-yjaiybwf	179	15	group	group	NN
cord-001207-yjaiybwf	179	16	(	(	-LRB-
cord-001207-yjaiybwf	179	17	Fig	Fig	NNP
cord-001207-yjaiybwf	179	18	.	.	.
cord-001207-yjaiybwf	179	19	6C	6C	NNP
cord-001207-yjaiybwf	179	20	)	)	-RRB-
cord-001207-yjaiybwf	179	21	.	.	.
cord-001207-yjaiybwf	180	1	Also	also	RB
cord-001207-yjaiybwf	180	2	,	,	,
cord-001207-yjaiybwf	180	3	no	no	DT
cord-001207-yjaiybwf	180	4	grouping	grouping	NN
cord-001207-yjaiybwf	180	5	according	accord	VBG
cord-001207-yjaiybwf	180	6	to	to	IN
cord-001207-yjaiybwf	180	7	age	age	NN
cord-001207-yjaiybwf	180	8	or	or	CC
cord-001207-yjaiybwf	180	9	feeding	feeding	NN
cord-001207-yjaiybwf	180	10	group	group	NN
cord-001207-yjaiybwf	180	11	was	be	VBD
cord-001207-yjaiybwf	180	12	evident	evident	JJ
cord-001207-yjaiybwf	180	13	,	,	,
cord-001207-yjaiybwf	180	14	when	when	WRB
cord-001207-yjaiybwf	180	15	only	only	RB
cord-001207-yjaiybwf	180	16	the	the	DT
cord-001207-yjaiybwf	180	17	sequences	sequence	NNS
cord-001207-yjaiybwf	180	18	of	of	IN
cord-001207-yjaiybwf	180	19	the	the	DT
cord-001207-yjaiybwf	180	20	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	180	21	phages	phage	NNS
cord-001207-yjaiybwf	180	22	were	be	VBD
cord-001207-yjaiybwf	180	23	used	use	VBN
cord-001207-yjaiybwf	180	24	for	for	IN
cord-001207-yjaiybwf	180	25	the	the	DT
cord-001207-yjaiybwf	180	26	analysis	analysis	NN
cord-001207-yjaiybwf	180	27	(	(	-LRB-
cord-001207-yjaiybwf	180	28	Fig	Fig	NNP
cord-001207-yjaiybwf	180	29	.	.	.
cord-001207-yjaiybwf	180	30	6D	6D	NNP
cord-001207-yjaiybwf	180	31	)	)	-RRB-
cord-001207-yjaiybwf	180	32	.	.	.
cord-001207-yjaiybwf	181	1	Comparisons	comparison	NNS
cord-001207-yjaiybwf	181	2	of	of	IN
cord-001207-yjaiybwf	181	3	the	the	DT
cord-001207-yjaiybwf	181	4	composition	composition	NN
cord-001207-yjaiybwf	181	5	of	of	IN
cord-001207-yjaiybwf	181	6	intestinal	intestinal	JJ
cord-001207-yjaiybwf	181	7	viromes	virome	NNS
cord-001207-yjaiybwf	181	8	from	from	IN
cord-001207-yjaiybwf	181	9	different	different	JJ
cord-001207-yjaiybwf	181	10	samples	sample	NNS
cord-001207-yjaiybwf	181	11	have	have	VBP
cord-001207-yjaiybwf	181	12	been	be	VBN
cord-001207-yjaiybwf	181	13	only	only	RB
cord-001207-yjaiybwf	181	14	scarcely	scarcely	RB
cord-001207-yjaiybwf	181	15	described	describe	VBN
cord-001207-yjaiybwf	181	16	so	so	RB
cord-001207-yjaiybwf	181	17	far	far	RB
cord-001207-yjaiybwf	181	18	.	.	.
cord-001207-yjaiybwf	182	1	A	a	DT
cord-001207-yjaiybwf	182	2	few	few	JJ
cord-001207-yjaiybwf	182	3	studies	study	NNS
cord-001207-yjaiybwf	182	4	investigated	investigate	VBD
cord-001207-yjaiybwf	182	5	individual	individual	JJ
cord-001207-yjaiybwf	182	6	differences	difference	NNS
cord-001207-yjaiybwf	182	7	of	of	IN
cord-001207-yjaiybwf	182	8	faecal	faecal	JJ
cord-001207-yjaiybwf	182	9	viromes	virome	NNS
cord-001207-yjaiybwf	182	10	and	and	CC
cord-001207-yjaiybwf	182	11	the	the	DT
cord-001207-yjaiybwf	182	12	influence	influence	NN
cord-001207-yjaiybwf	182	13	of	of	IN
cord-001207-yjaiybwf	182	14	diet	diet	NN
cord-001207-yjaiybwf	182	15	and	and	CC
cord-001207-yjaiybwf	182	16	age	age	NN
cord-001207-yjaiybwf	182	17	in	in	IN
cord-001207-yjaiybwf	182	18	humans	human	NNS
cord-001207-yjaiybwf	182	19	[	[	-LRB-
cord-001207-yjaiybwf	182	20	1	1	CD
cord-001207-yjaiybwf	182	21	,	,	,
cord-001207-yjaiybwf	182	22	9	9	CD
cord-001207-yjaiybwf	182	23	,	,	,
cord-001207-yjaiybwf	182	24	24	24	CD
cord-001207-yjaiybwf	182	25	]	]	-RRB-
cord-001207-yjaiybwf	182	26	,	,	,
cord-001207-yjaiybwf	182	27	whereas	whereas	IN
cord-001207-yjaiybwf	182	28	similar	similar	JJ
cord-001207-yjaiybwf	182	29	studies	study	NNS
cord-001207-yjaiybwf	182	30	on	on	IN
cord-001207-yjaiybwf	182	31	faecal	faecal	JJ
cord-001207-yjaiybwf	182	32	viromes	virome	NNS
cord-001207-yjaiybwf	182	33	of	of	IN
cord-001207-yjaiybwf	182	34	pigs	pig	NNS
cord-001207-yjaiybwf	182	35	are	be	VBP
cord-001207-yjaiybwf	182	36	almost	almost	RB
cord-001207-yjaiybwf	182	37	missing	missing	JJ
cord-001207-yjaiybwf	182	38	.	.	.
cord-001207-yjaiybwf	183	1	Technical	technical	JJ
cord-001207-yjaiybwf	183	2	problems	problem	NNS
cord-001207-yjaiybwf	183	3	with	with	IN
cord-001207-yjaiybwf	183	4	the	the	DT
cord-001207-yjaiybwf	183	5	use	use	NN
cord-001207-yjaiybwf	183	6	of	of	IN
cord-001207-yjaiybwf	183	7	deep	deep	JJ
cord-001207-yjaiybwf	183	8	sequencing	sequencing	NN
cord-001207-yjaiybwf	183	9	methods	method	NNS
cord-001207-yjaiybwf	183	10	for	for	IN
cord-001207-yjaiybwf	183	11	comparative	comparative	JJ
cord-001207-yjaiybwf	183	12	virome	virome	NN
cord-001207-yjaiybwf	183	13	analyses	analysis	NNS
cord-001207-yjaiybwf	183	14	may	may	MD
cord-001207-yjaiybwf	183	15	represent	represent	VB
cord-001207-yjaiybwf	183	16	one	one	CD
cord-001207-yjaiybwf	183	17	major	major	JJ
cord-001207-yjaiybwf	183	18	problem	problem	NN
cord-001207-yjaiybwf	183	19	in	in	IN
cord-001207-yjaiybwf	183	20	this	this	DT
cord-001207-yjaiybwf	183	21	context	context	NN
cord-001207-yjaiybwf	183	22	[	[	-LRB-
cord-001207-yjaiybwf	183	23	10	10	CD
cord-001207-yjaiybwf	183	24	,	,	,
cord-001207-yjaiybwf	183	25	48	48	CD
cord-001207-yjaiybwf	183	26	]	]	-RRB-
cord-001207-yjaiybwf	183	27	.	.	.
cord-001207-yjaiybwf	184	1	Here	here	RB
cord-001207-yjaiybwf	184	2	,	,	,
cord-001207-yjaiybwf	184	3	we	-PRON-	PRP
cord-001207-yjaiybwf	184	4	tried	try	VBD
cord-001207-yjaiybwf	184	5	to	to	TO
cord-001207-yjaiybwf	184	6	overcome	overcome	VB
cord-001207-yjaiybwf	184	7	some	some	DT
cord-001207-yjaiybwf	184	8	of	of	IN
cord-001207-yjaiybwf	184	9	these	these	DT
cord-001207-yjaiybwf	184	10	problems	problem	NNS
cord-001207-yjaiybwf	184	11	by	by	IN
cord-001207-yjaiybwf	184	12	using	use	VBG
cord-001207-yjaiybwf	184	13	a	a	DT
cord-001207-yjaiybwf	184	14	process	process	NN
cord-001207-yjaiybwf	184	15	-	-	HYPH
cord-001207-yjaiybwf	184	16	controlled	control	VBN
cord-001207-yjaiybwf	184	17	deep	deep	JJ
cord-001207-yjaiybwf	184	18	sequencing	sequencing	NN
cord-001207-yjaiybwf	184	19	approach	approach	NN
cord-001207-yjaiybwf	184	20	[	[	-LRB-
cord-001207-yjaiybwf	184	21	10	10	CD
cord-001207-yjaiybwf	184	22	]	]	-RRB-
cord-001207-yjaiybwf	184	23	.	.	.
cord-001207-yjaiybwf	185	1	By	by	IN
cord-001207-yjaiybwf	185	2	this	this	DT
cord-001207-yjaiybwf	185	3	,	,	,
cord-001207-yjaiybwf	185	4	the	the	DT
cord-001207-yjaiybwf	185	5	efficiency	efficiency	NN
cord-001207-yjaiybwf	185	6	of	of	IN
cord-001207-yjaiybwf	185	7	the	the	DT
cord-001207-yjaiybwf	185	8	analysis	analysis	NN
cord-001207-yjaiybwf	185	9	can	can	MD
cord-001207-yjaiybwf	185	10	be	be	VB
cord-001207-yjaiybwf	185	11	estimated	estimate	VBN
cord-001207-yjaiybwf	185	12	for	for	IN
cord-001207-yjaiybwf	185	13	each	each	DT
cord-001207-yjaiybwf	185	14	sample	sample	NN
cord-001207-yjaiybwf	185	15	,	,	,
cord-001207-yjaiybwf	185	16	thereby	thereby	RB
cord-001207-yjaiybwf	185	17	enabling	enable	VBG
cord-001207-yjaiybwf	185	18	identification	identification	NN
cord-001207-yjaiybwf	185	19	of	of	IN
cord-001207-yjaiybwf	185	20	major	major	JJ
cord-001207-yjaiybwf	185	21	differences	difference	NNS
cord-001207-yjaiybwf	185	22	due	due	JJ
cord-001207-yjaiybwf	185	23	to	to	IN
cord-001207-yjaiybwf	185	24	different	different	JJ
cord-001207-yjaiybwf	185	25	performances	performance	NNS
cord-001207-yjaiybwf	185	26	of	of	IN
cord-001207-yjaiybwf	185	27	the	the	DT
cord-001207-yjaiybwf	185	28	method	method	NN
cord-001207-yjaiybwf	185	29	.	.	.
cord-001207-yjaiybwf	186	1	We	-PRON-	PRP
cord-001207-yjaiybwf	186	2	could	could	MD
cord-001207-yjaiybwf	186	3	show	show	VB
cord-001207-yjaiybwf	186	4	here	here	RB
cord-001207-yjaiybwf	186	5	,	,	,
cord-001207-yjaiybwf	186	6	that	that	IN
cord-001207-yjaiybwf	186	7	all	all	DT
cord-001207-yjaiybwf	186	8	types	type	NNS
cord-001207-yjaiybwf	186	9	of	of	IN
cord-001207-yjaiybwf	186	10	the	the	DT
cord-001207-yjaiybwf	186	11	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	186	12	used	use	VBN
cord-001207-yjaiybwf	186	13	as	as	IN
cord-001207-yjaiybwf	186	14	process	process	NN
cord-001207-yjaiybwf	186	15	control	control	NN
cord-001207-yjaiybwf	186	16	could	could	MD
cord-001207-yjaiybwf	186	17	be	be	VB
cord-001207-yjaiybwf	186	18	detected	detect	VBN
cord-001207-yjaiybwf	186	19	in	in	IN
cord-001207-yjaiybwf	186	20	the	the	DT
cord-001207-yjaiybwf	186	21	final	final	JJ
cord-001207-yjaiybwf	186	22	data	data	NN
cord-001207-yjaiybwf	186	23	sets	set	NNS
cord-001207-yjaiybwf	186	24	of	of	IN
cord-001207-yjaiybwf	186	25	all	all	DT
cord-001207-yjaiybwf	186	26	samples	sample	NNS
cord-001207-yjaiybwf	186	27	.	.	.
cord-001207-yjaiybwf	187	1	This	this	DT
cord-001207-yjaiybwf	187	2	indicates	indicate	VBZ
cord-001207-yjaiybwf	187	3	that	that	IN
cord-001207-yjaiybwf	187	4	the	the	DT
cord-001207-yjaiybwf	187	5	method	method	NN
cord-001207-yjaiybwf	187	6	has	have	VBZ
cord-001207-yjaiybwf	187	7	a	a	DT
cord-001207-yjaiybwf	187	8	reproducible	reproducible	JJ
cord-001207-yjaiybwf	187	9	performance	performance	NN
cord-001207-yjaiybwf	187	10	and	and	CC
cord-001207-yjaiybwf	187	11	the	the	DT
cord-001207-yjaiybwf	187	12	generated	generate	VBN
cord-001207-yjaiybwf	187	13	data	datum	NNS
cord-001207-yjaiybwf	187	14	can	can	MD
cord-001207-yjaiybwf	187	15	generally	generally	RB
cord-001207-yjaiybwf	187	16	be	be	VB
cord-001207-yjaiybwf	187	17	used	use	VBN
cord-001207-yjaiybwf	187	18	for	for	IN
cord-001207-yjaiybwf	187	19	comparative	comparative	JJ
cord-001207-yjaiybwf	187	20	analyses	analysis	NNS
cord-001207-yjaiybwf	187	21	.	.	.
cord-001207-yjaiybwf	188	1	However	however	RB
cord-001207-yjaiybwf	188	2	,	,	,
cord-001207-yjaiybwf	188	3	the	the	DT
cord-001207-yjaiybwf	188	4	detection	detection	NN
cord-001207-yjaiybwf	188	5	rates	rate	NNS
cord-001207-yjaiybwf	188	6	of	of	IN
cord-001207-yjaiybwf	188	7	the	the	DT
cord-001207-yjaiybwf	188	8	process	process	NN
cord-001207-yjaiybwf	188	9	control	control	NN
cord-001207-yjaiybwf	188	10	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	188	11	varied	varied	JJ
cord-001207-yjaiybwf	188	12	between	between	IN
cord-001207-yjaiybwf	188	13	the	the	DT
cord-001207-yjaiybwf	188	14	samples	sample	NNS
cord-001207-yjaiybwf	188	15	from	from	IN
cord-001207-yjaiybwf	188	16	0.9	0.9	CD
cord-001207-yjaiybwf	188	17	%	%	NN
cord-001207-yjaiybwf	188	18	to	to	IN
cord-001207-yjaiybwf	188	19	3.4	3.4	CD
cord-001207-yjaiybwf	188	20	%	%	NN
cord-001207-yjaiybwf	188	21	.	.	.
cord-001207-yjaiybwf	189	1	As	as	IN
cord-001207-yjaiybwf	189	2	the	the	DT
cord-001207-yjaiybwf	189	3	detection	detection	NN
cord-001207-yjaiybwf	189	4	rate	rate	NN
cord-001207-yjaiybwf	189	5	of	of	IN
cord-001207-yjaiybwf	189	6	the	the	DT
cord-001207-yjaiybwf	189	7	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	189	8	is	be	VBZ
cord-001207-yjaiybwf	189	9	-besides	-besides	:
cord-001207-yjaiybwf	189	10	technical	technical	JJ
cord-001207-yjaiybwf	189	11	factors	factor	NNS
cord-001207-yjaiybwf	189	12	-also	-also	RB
cord-001207-yjaiybwf	189	13	dependent	dependent	JJ
cord-001207-yjaiybwf	189	14	on	on	IN
cord-001207-yjaiybwf	189	15	the	the	DT
cord-001207-yjaiybwf	189	16	amount	amount	NN
cord-001207-yjaiybwf	189	17	of	of	IN
cord-001207-yjaiybwf	189	18	viruses	virus	NNS
cord-001207-yjaiybwf	189	19	initially	initially	RB
cord-001207-yjaiybwf	189	20	present	present	JJ
cord-001207-yjaiybwf	189	21	in	in	IN
cord-001207-yjaiybwf	189	22	the	the	DT
cord-001207-yjaiybwf	189	23	analyzed	analyze	VBN
cord-001207-yjaiybwf	189	24	sample	sample	NN
cord-001207-yjaiybwf	189	25	,	,	,
cord-001207-yjaiybwf	189	26	improved	improve	VBN
cord-001207-yjaiybwf	189	27	deep	deep	JJ
cord-001207-yjaiybwf	189	28	sequencing	sequencing	NN
cord-001207-yjaiybwf	189	29	methods	method	NNS
cord-001207-yjaiybwf	189	30	enabling	enable	VBG
cord-001207-yjaiybwf	189	31	quantitative	quantitative	JJ
cord-001207-yjaiybwf	189	32	analyses	analysis	NNS
cord-001207-yjaiybwf	189	33	should	should	MD
cord-001207-yjaiybwf	189	34	be	be	VB
cord-001207-yjaiybwf	189	35	developed	develop	VBN
cord-001207-yjaiybwf	189	36	in	in	IN
cord-001207-yjaiybwf	189	37	future	future	NN
cord-001207-yjaiybwf	189	38	for	for	IN
cord-001207-yjaiybwf	189	39	comparative	comparative	JJ
cord-001207-yjaiybwf	189	40	virome	virome	NN
cord-001207-yjaiybwf	189	41	investigations	investigation	NNS
cord-001207-yjaiybwf	189	42	.	.	.
cord-001207-yjaiybwf	190	1	In	in	IN
cord-001207-yjaiybwf	190	2	the	the	DT
cord-001207-yjaiybwf	190	3	eight	eight	CD
cord-001207-yjaiybwf	190	4	investigated	investigate	VBN
cord-001207-yjaiybwf	190	5	pooled	pool	VBN
cord-001207-yjaiybwf	190	6	samples	sample	NNS
cord-001207-yjaiybwf	190	7	,	,	,
cord-001207-yjaiybwf	190	8	the	the	DT
cord-001207-yjaiybwf	190	9	overall	overall	JJ
cord-001207-yjaiybwf	190	10	composition	composition	NN
cord-001207-yjaiybwf	190	11	of	of	IN
cord-001207-yjaiybwf	190	12	the	the	DT
cord-001207-yjaiybwf	190	13	virus	virus	NN
cord-001207-yjaiybwf	190	14	community	community	NN
cord-001207-yjaiybwf	190	15	was	be	VBD
cord-001207-yjaiybwf	190	16	similar	similar	JJ
cord-001207-yjaiybwf	190	17	to	to	IN
cord-001207-yjaiybwf	190	18	that	that	DT
cord-001207-yjaiybwf	190	19	described	describe	VBN
cord-001207-yjaiybwf	190	20	for	for	IN
cord-001207-yjaiybwf	190	21	other	other	JJ
cord-001207-yjaiybwf	190	22	pig	pig	NN
cord-001207-yjaiybwf	190	23	faecal	faecal	JJ
cord-001207-yjaiybwf	190	24	viromes	viromes	NNP
cord-001207-yjaiybwf	190	25	[	[	-LRB-
cord-001207-yjaiybwf	190	26	2	2	CD
cord-001207-yjaiybwf	190	27	,	,	,
cord-001207-yjaiybwf	190	28	10	10	CD
cord-001207-yjaiybwf	190	29	,	,	,
cord-001207-yjaiybwf	190	30	11	11	CD
cord-001207-yjaiybwf	190	31	]	]	-RRB-
cord-001207-yjaiybwf	190	32	.	.	.
cord-001207-yjaiybwf	191	1	The	the	DT
cord-001207-yjaiybwf	191	2	two	two	CD
cord-001207-yjaiybwf	191	3	major	major	JJ
cord-001207-yjaiybwf	191	4	virus	virus	NN
cord-001207-yjaiybwf	191	5	groups	group	NNS
cord-001207-yjaiybwf	191	6	were	be	VBD
cord-001207-yjaiybwf	191	7	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	191	8	and	and	CC
cord-001207-yjaiybwf	191	9	porcine	porcine	JJ
cord-001207-yjaiybwf	191	10	viruses	virus	NNS
cord-001207-yjaiybwf	191	11	,	,	,
cord-001207-yjaiybwf	191	12	whereas	whereas	IN
cord-001207-yjaiybwf	191	13	plant	plant	NN
cord-001207-yjaiybwf	191	14	viruses	virus	NNS
cord-001207-yjaiybwf	191	15	and	and	CC
cord-001207-yjaiybwf	191	16	viruses	virus	NNS
cord-001207-yjaiybwf	191	17	with	with	IN
cord-001207-yjaiybwf	191	18	other	other	JJ
cord-001207-yjaiybwf	191	19	hosts	host	NNS
cord-001207-yjaiybwf	191	20	were	be	VBD
cord-001207-yjaiybwf	191	21	only	only	RB
cord-001207-yjaiybwf	191	22	rarely	rarely	RB
cord-001207-yjaiybwf	191	23	detected	detect	VBN
cord-001207-yjaiybwf	191	24	.	.	.
cord-001207-yjaiybwf	192	1	However	however	RB
cord-001207-yjaiybwf	192	2	,	,	,
cord-001207-yjaiybwf	192	3	large	large	JJ
cord-001207-yjaiybwf	192	4	differences	difference	NNS
cord-001207-yjaiybwf	192	5	were	be	VBD
cord-001207-yjaiybwf	192	6	detected	detect	VBN
cord-001207-yjaiybwf	192	7	in	in	IN
cord-001207-yjaiybwf	192	8	the	the	DT
cord-001207-yjaiybwf	192	9	ratio	ratio	NN
cord-001207-yjaiybwf	192	10	between	between	IN
cord-001207-yjaiybwf	192	11	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	192	12	and	and	CC
cord-001207-yjaiybwf	192	13	mammalian	mammalian	JJ
cord-001207-yjaiybwf	192	14	viruses	virus	NNS
cord-001207-yjaiybwf	192	15	in	in	IN
cord-001207-yjaiybwf	192	16	the	the	DT
cord-001207-yjaiybwf	192	17	distinct	distinct	JJ
cord-001207-yjaiybwf	192	18	samples	sample	NNS
cord-001207-yjaiybwf	192	19	;	;	:
cord-001207-yjaiybwf	192	20	in	in	IN
cord-001207-yjaiybwf	192	21	addition	addition	NN
cord-001207-yjaiybwf	192	22	,	,	,
cord-001207-yjaiybwf	192	23	the	the	DT
cord-001207-yjaiybwf	192	24	diversity	diversity	NN
cord-001207-yjaiybwf	192	25	of	of	IN
cord-001207-yjaiybwf	192	26	detected	detect	VBN
cord-001207-yjaiybwf	192	27	virus	virus	NN
cord-001207-yjaiybwf	192	28	species	specie	NNS
cord-001207-yjaiybwf	192	29	varied	varied	JJ
cord-001207-yjaiybwf	192	30	between	between	IN
cord-001207-yjaiybwf	192	31	the	the	DT
cord-001207-yjaiybwf	192	32	analysed	analyse	VBN
cord-001207-yjaiybwf	192	33	viromes	virome	NNS
cord-001207-yjaiybwf	192	34	.	.	.
cord-001207-yjaiybwf	193	1	These	these	DT
cord-001207-yjaiybwf	193	2	data	datum	NNS
cord-001207-yjaiybwf	193	3	indicate	indicate	VBP
cord-001207-yjaiybwf	193	4	that	that	IN
cord-001207-yjaiybwf	193	5	the	the	DT
cord-001207-yjaiybwf	193	6	faecal	faecal	JJ
cord-001207-yjaiybwf	193	7	virome	virome	NN
cord-001207-yjaiybwf	193	8	of	of	IN
cord-001207-yjaiybwf	193	9	pigs	pig	NNS
cord-001207-yjaiybwf	193	10	is	be	VBZ
cord-001207-yjaiybwf	193	11	not	not	RB
cord-001207-yjaiybwf	193	12	uniform	uniform	JJ
cord-001207-yjaiybwf	193	13	and	and	CC
cord-001207-yjaiybwf	193	14	static	static	JJ
cord-001207-yjaiybwf	193	15	,	,	,
cord-001207-yjaiybwf	193	16	but	but	CC
cord-001207-yjaiybwf	193	17	shows	show	VBZ
cord-001207-yjaiybwf	193	18	a	a	DT
cord-001207-yjaiybwf	193	19	remarkable	remarkable	JJ
cord-001207-yjaiybwf	193	20	variability	variability	NN
cord-001207-yjaiybwf	193	21	.	.	.
cord-001207-yjaiybwf	194	1	For	for	IN
cord-001207-yjaiybwf	194	2	human	human	JJ
cord-001207-yjaiybwf	194	3	faecal	faecal	JJ
cord-001207-yjaiybwf	194	4	viromes	virome	NNS
cord-001207-yjaiybwf	194	5	,	,	,
cord-001207-yjaiybwf	194	6	a	a	DT
cord-001207-yjaiybwf	194	7	high	high	JJ
cord-001207-yjaiybwf	194	8	variability	variability	NN
cord-001207-yjaiybwf	194	9	even	even	RB
cord-001207-yjaiybwf	194	10	between	between	IN
cord-001207-yjaiybwf	194	11	the	the	DT
cord-001207-yjaiybwf	194	12	analyzed	analyze	VBN
cord-001207-yjaiybwf	194	13	individuals	individual	NNS
cord-001207-yjaiybwf	194	14	has	have	VBZ
cord-001207-yjaiybwf	194	15	been	be	VBN
cord-001207-yjaiybwf	194	16	described	describe	VBN
cord-001207-yjaiybwf	194	17	[	[	-LRB-
cord-001207-yjaiybwf	194	18	1	1	CD
cord-001207-yjaiybwf	194	19	,	,	,
cord-001207-yjaiybwf	194	20	9	9	CD
cord-001207-yjaiybwf	194	21	]	]	-RRB-
cord-001207-yjaiybwf	194	22	.	.	.
cord-001207-yjaiybwf	195	1	As	as	IN
cord-001207-yjaiybwf	195	2	only	only	RB
cord-001207-yjaiybwf	195	3	pooled	pool	VBN
cord-001207-yjaiybwf	195	4	faecal	faecal	JJ
cord-001207-yjaiybwf	195	5	samples	sample	NNS
cord-001207-yjaiybwf	195	6	have	have	VBP
cord-001207-yjaiybwf	195	7	been	be	VBN
cord-001207-yjaiybwf	195	8	analyzed	analyze	VBN
cord-001207-yjaiybwf	195	9	in	in	IN
cord-001207-yjaiybwf	195	10	the	the	DT
cord-001207-yjaiybwf	195	11	study	study	NN
cord-001207-yjaiybwf	195	12	presented	present	VBN
cord-001207-yjaiybwf	195	13	here	here	RB
cord-001207-yjaiybwf	195	14	,	,	,
cord-001207-yjaiybwf	195	15	future	future	JJ
cord-001207-yjaiybwf	195	16	investigations	investigation	NNS
cord-001207-yjaiybwf	195	17	are	be	VBP
cord-001207-yjaiybwf	195	18	necessary	necessary	JJ
cord-001207-yjaiybwf	195	19	in	in	IN
cord-001207-yjaiybwf	195	20	order	order	NN
cord-001207-yjaiybwf	195	21	to	to	TO
cord-001207-yjaiybwf	195	22	assess	assess	VB
cord-001207-yjaiybwf	195	23	the	the	DT
cord-001207-yjaiybwf	195	24	inter	inter	JJ
cord-001207-yjaiybwf	195	25	-	-	JJ
cord-001207-yjaiybwf	195	26	individual	individual	JJ
cord-001207-yjaiybwf	195	27	variability	variability	NN
cord-001207-yjaiybwf	195	28	of	of	IN
cord-001207-yjaiybwf	195	29	faecal	faecal	JJ
cord-001207-yjaiybwf	195	30	viromes	virome	NNS
cord-001207-yjaiybwf	195	31	of	of	IN
cord-001207-yjaiybwf	195	32	pigs	pig	NNS
cord-001207-yjaiybwf	195	33	.	.	.
cord-001207-yjaiybwf	196	1	The	the	DT
cord-001207-yjaiybwf	196	2	most	most	RBS
cord-001207-yjaiybwf	196	3	obvious	obvious	JJ
cord-001207-yjaiybwf	196	4	factor	factor	NN
cord-001207-yjaiybwf	196	5	influencing	influence	VBG
cord-001207-yjaiybwf	196	6	the	the	DT
cord-001207-yjaiybwf	196	7	composition	composition	NN
cord-001207-yjaiybwf	196	8	of	of	IN
cord-001207-yjaiybwf	196	9	the	the	DT
cord-001207-yjaiybwf	196	10	pig	pig	NN
cord-001207-yjaiybwf	196	11	faecal	faecal	JJ
cord-001207-yjaiybwf	196	12	virome	virome	NNP
cord-001207-yjaiybwf	196	13	was	be	VBD
cord-001207-yjaiybwf	196	14	the	the	DT
cord-001207-yjaiybwf	196	15	age	age	NN
cord-001207-yjaiybwf	196	16	.	.	.
cord-001207-yjaiybwf	197	1	The	the	DT
cord-001207-yjaiybwf	197	2	percentage	percentage	NN
cord-001207-yjaiybwf	197	3	of	of	IN
cord-001207-yjaiybwf	197	4	porcine	porcine	JJ
cord-001207-yjaiybwf	197	5	viruses	virus	NNS
cord-001207-yjaiybwf	197	6	,	,	,
cord-001207-yjaiybwf	197	7	which	which	WDT
cord-001207-yjaiybwf	197	8	comprised	comprise	VBD
cord-001207-yjaiybwf	197	9	the	the	DT
cord-001207-yjaiybwf	197	10	most	most	RBS
cord-001207-yjaiybwf	197	11	abundant	abundant	JJ
cord-001207-yjaiybwf	197	12	group	group	NN
cord-001207-yjaiybwf	197	13	in	in	IN
cord-001207-yjaiybwf	197	14	the	the	DT
cord-001207-yjaiybwf	197	15	youngest	young	JJS
cord-001207-yjaiybwf	197	16	piglet	piglet	NN
cord-001207-yjaiybwf	197	17	samples	sample	NNS
cord-001207-yjaiybwf	197	18	,	,	,
cord-001207-yjaiybwf	197	19	decreased	decrease	VBD
cord-001207-yjaiybwf	197	20	dramatically	dramatically	RB
cord-001207-yjaiybwf	197	21	in	in	IN
cord-001207-yjaiybwf	197	22	the	the	DT
cord-001207-yjaiybwf	197	23	samples	sample	NNS
cord-001207-yjaiybwf	197	24	from	from	IN
cord-001207-yjaiybwf	197	25	the	the	DT
cord-001207-yjaiybwf	197	26	older	old	JJR
cord-001207-yjaiybwf	197	27	pigs	pig	NNS
cord-001207-yjaiybwf	197	28	.	.	.
cord-001207-yjaiybwf	198	1	In	in	IN
cord-001207-yjaiybwf	198	2	parallel	parallel	NN
cord-001207-yjaiybwf	198	3	,	,	,
cord-001207-yjaiybwf	198	4	the	the	DT
cord-001207-yjaiybwf	198	5	percentage	percentage	NN
cord-001207-yjaiybwf	198	6	of	of	IN
cord-001207-yjaiybwf	198	7	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	198	8	as	as	RB
cord-001207-yjaiybwf	198	9	well	well	RB
cord-001207-yjaiybwf	198	10	as	as	IN
cord-001207-yjaiybwf	198	11	the	the	DT
cord-001207-yjaiybwf	198	12	diversity	diversity	NN
cord-001207-yjaiybwf	198	13	of	of	IN
cord-001207-yjaiybwf	198	14	detected	detect	VBN
cord-001207-yjaiybwf	198	15	virus	virus	NN
cord-001207-yjaiybwf	198	16	species	specie	NNS
cord-001207-yjaiybwf	198	17	increased	increase	VBN
cord-001207-yjaiybwf	198	18	by	by	IN
cord-001207-yjaiybwf	198	19	age	age	NN
cord-001207-yjaiybwf	198	20	.	.	.
cord-001207-yjaiybwf	199	1	Interestingly	interestingly	RB
cord-001207-yjaiybwf	199	2	,	,	,
cord-001207-yjaiybwf	199	3	porcine	porcine	JJ
cord-001207-yjaiybwf	199	4	kobuvirus	kobuvirus	NN
cord-001207-yjaiybwf	199	5	and	and	CC
cord-001207-yjaiybwf	199	6	pig	pig	NN
cord-001207-yjaiybwf	199	7	SCV	SCV	NNP
cord-001207-yjaiybwf	199	8	,	,	,
cord-001207-yjaiybwf	199	9	which	which	WDT
cord-001207-yjaiybwf	199	10	both	both	DT
cord-001207-yjaiybwf	199	11	had	have	VBD
cord-001207-yjaiybwf	199	12	been	be	VBN
cord-001207-yjaiybwf	199	13	discovered	discover	VBN
cord-001207-yjaiybwf	199	14	only	only	RB
cord-001207-yjaiybwf	199	15	recently	recently	RB
cord-001207-yjaiybwf	199	16	[	[	-LRB-
cord-001207-yjaiybwf	199	17	10	10	CD
cord-001207-yjaiybwf	199	18	,	,	,
cord-001207-yjaiybwf	199	19	49	49	CD
cord-001207-yjaiybwf	199	20	]	]	-RRB-
cord-001207-yjaiybwf	199	21	,	,	,
cord-001207-yjaiybwf	199	22	were	be	VBD
cord-001207-yjaiybwf	199	23	among	among	IN
cord-001207-yjaiybwf	199	24	the	the	DT
cord-001207-yjaiybwf	199	25	most	most	RBS
cord-001207-yjaiybwf	199	26	frequently	frequently	RB
cord-001207-yjaiybwf	199	27	detected	detect	VBN
cord-001207-yjaiybwf	199	28	viruses	virus	NNS
cord-001207-yjaiybwf	199	29	in	in	IN
cord-001207-yjaiybwf	199	30	the	the	DT
cord-001207-yjaiybwf	199	31	faecal	faecal	JJ
cord-001207-yjaiybwf	199	32	viromes	virome	NNS
cord-001207-yjaiybwf	199	33	of	of	IN
cord-001207-yjaiybwf	199	34	the	the	DT
cord-001207-yjaiybwf	199	35	youngest	young	JJS
cord-001207-yjaiybwf	199	36	and	and	CC
cord-001207-yjaiybwf	199	37	oldest	old	JJS
cord-001207-yjaiybwf	199	38	age	age	NN
cord-001207-yjaiybwf	199	39	groups	group	NNS
cord-001207-yjaiybwf	199	40	,	,	,
cord-001207-yjaiybwf	199	41	respectively	respectively	RB
cord-001207-yjaiybwf	199	42	.	.	.
cord-001207-yjaiybwf	200	1	This	this	DT
cord-001207-yjaiybwf	200	2	underlines	underline	VBZ
cord-001207-yjaiybwf	200	3	the	the	DT
cord-001207-yjaiybwf	200	4	importance	importance	NN
cord-001207-yjaiybwf	200	5	of	of	IN
cord-001207-yjaiybwf	200	6	unfocused	unfocused	JJ
cord-001207-yjaiybwf	200	7	detection	detection	NN
cord-001207-yjaiybwf	200	8	systems	system	NNS
cord-001207-yjaiybwf	200	9	in	in	IN
cord-001207-yjaiybwf	200	10	order	order	NN
cord-001207-yjaiybwf	200	11	to	to	TO
cord-001207-yjaiybwf	200	12	get	get	VB
cord-001207-yjaiybwf	200	13	an	an	DT
cord-001207-yjaiybwf	200	14	undistorted	undistorted	JJ
cord-001207-yjaiybwf	200	15	picture	picture	NN
cord-001207-yjaiybwf	200	16	of	of	IN
cord-001207-yjaiybwf	200	17	the	the	DT
cord-001207-yjaiybwf	200	18	abundance	abundance	NN
cord-001207-yjaiybwf	200	19	of	of	IN
cord-001207-yjaiybwf	200	20	viruses	virus	NNS
cord-001207-yjaiybwf	200	21	in	in	IN
cord-001207-yjaiybwf	200	22	a	a	DT
cord-001207-yjaiybwf	200	23	sample	sample	NN
cord-001207-yjaiybwf	200	24	.	.	.
cord-001207-yjaiybwf	201	1	As	as	IN
cord-001207-yjaiybwf	201	2	all	all	DT
cord-001207-yjaiybwf	201	3	samples	sample	NNS
cord-001207-yjaiybwf	201	4	analyzed	analyze	VBN
cord-001207-yjaiybwf	201	5	here	here	RB
cord-001207-yjaiybwf	201	6	originated	originate	VBD
cord-001207-yjaiybwf	201	7	from	from	IN
cord-001207-yjaiybwf	201	8	an	an	DT
cord-001207-yjaiybwf	201	9	experimental	experimental	JJ
cord-001207-yjaiybwf	201	10	feeding	feeding	NN
cord-001207-yjaiybwf	201	11	trial	trial	NN
cord-001207-yjaiybwf	201	12	,	,	,
cord-001207-yjaiybwf	201	13	the	the	DT
cord-001207-yjaiybwf	201	14	detected	detect	VBN
cord-001207-yjaiybwf	201	15	virus	virus	NN
cord-001207-yjaiybwf	201	16	composition	composition	NN
cord-001207-yjaiybwf	201	17	may	may	MD
cord-001207-yjaiybwf	201	18	vary	vary	VB
cord-001207-yjaiybwf	201	19	in	in	IN
cord-001207-yjaiybwf	201	20	comparison	comparison	NN
cord-001207-yjaiybwf	201	21	to	to	IN
cord-001207-yjaiybwf	201	22	field	field	NN
cord-001207-yjaiybwf	201	23	-	-	HYPH
cord-001207-yjaiybwf	201	24	origin	origin	NN
cord-001207-yjaiybwf	201	25	samples	sample	NNS
cord-001207-yjaiybwf	201	26	.	.	.
cord-001207-yjaiybwf	202	1	However	however	RB
cord-001207-yjaiybwf	202	2	,	,	,
cord-001207-yjaiybwf	202	3	the	the	DT
cord-001207-yjaiybwf	202	4	age	age	NN
cord-001207-yjaiybwf	202	5	-	-	HYPH
cord-001207-yjaiybwf	202	6	specific	specific	JJ
cord-001207-yjaiybwf	202	7	effect	effect	NN
cord-001207-yjaiybwf	202	8	was	be	VBD
cord-001207-yjaiybwf	202	9	strong	strong	JJ
cord-001207-yjaiybwf	202	10	and	and	CC
cord-001207-yjaiybwf	202	11	very	very	RB
cord-001207-yjaiybwf	202	12	similar	similar	JJ
cord-001207-yjaiybwf	202	13	in	in	IN
cord-001207-yjaiybwf	202	14	both	both	DT
cord-001207-yjaiybwf	202	15	analyzed	analyze	VBN
cord-001207-yjaiybwf	202	16	groups	group	NNS
cord-001207-yjaiybwf	202	17	,	,	,
cord-001207-yjaiybwf	202	18	which	which	WDT
cord-001207-yjaiybwf	202	19	were	be	VBD
cord-001207-yjaiybwf	202	20	held	hold	VBN
cord-001207-yjaiybwf	202	21	completely	completely	RB
cord-001207-yjaiybwf	202	22	separate	separate	JJ
cord-001207-yjaiybwf	202	23	during	during	IN
cord-001207-yjaiybwf	202	24	the	the	DT
cord-001207-yjaiybwf	202	25	whole	whole	JJ
cord-001207-yjaiybwf	202	26	period	period	NN
cord-001207-yjaiybwf	202	27	of	of	IN
cord-001207-yjaiybwf	202	28	the	the	DT
cord-001207-yjaiybwf	202	29	experiment	experiment	NN
cord-001207-yjaiybwf	202	30	.	.	.
cord-001207-yjaiybwf	203	1	The	the	DT
cord-001207-yjaiybwf	203	2	differences	difference	NNS
cord-001207-yjaiybwf	203	3	may	may	MD
cord-001207-yjaiybwf	203	4	be	be	VB
cord-001207-yjaiybwf	203	5	explained	explain	VBN
cord-001207-yjaiybwf	203	6	by	by	IN
cord-001207-yjaiybwf	203	7	an	an	DT
cord-001207-yjaiybwf	203	8	age	age	NN
cord-001207-yjaiybwf	203	9	-	-	HYPH
cord-001207-yjaiybwf	203	10	related	relate	VBN
cord-001207-yjaiybwf	203	11	susceptibility	susceptibility	NN
cord-001207-yjaiybwf	203	12	to	to	IN
cord-001207-yjaiybwf	203	13	specific	specific	JJ
cord-001207-yjaiybwf	203	14	virus	virus	NN
cord-001207-yjaiybwf	203	15	infections	infection	NNS
cord-001207-yjaiybwf	203	16	as	as	RB
cord-001207-yjaiybwf	203	17	well	well	RB
cord-001207-yjaiybwf	203	18	as	as	IN
cord-001207-yjaiybwf	203	19	by	by	IN
cord-001207-yjaiybwf	203	20	an	an	DT
cord-001207-yjaiybwf	203	21	increasing	increase	VBG
cord-001207-yjaiybwf	203	22	immunity	immunity	NN
cord-001207-yjaiybwf	203	23	to	to	IN
cord-001207-yjaiybwf	203	24	porcine	porcine	JJ
cord-001207-yjaiybwf	203	25	viruses	virus	NNS
cord-001207-yjaiybwf	203	26	due	due	JJ
cord-001207-yjaiybwf	203	27	to	to	IN
cord-001207-yjaiybwf	203	28	completed	complete	VBN
cord-001207-yjaiybwf	203	29	virus	virus	NN
cord-001207-yjaiybwf	203	30	infections	infection	NNS
cord-001207-yjaiybwf	203	31	with	with	IN
cord-001207-yjaiybwf	203	32	higher	high	JJR
cord-001207-yjaiybwf	203	33	age	age	NN
cord-001207-yjaiybwf	203	34	.	.	.
cord-001207-yjaiybwf	204	1	In	in	IN
cord-001207-yjaiybwf	204	2	addition	addition	NN
cord-001207-yjaiybwf	204	3	,	,	,
cord-001207-yjaiybwf	204	4	the	the	DT
cord-001207-yjaiybwf	204	5	progressive	progressive	JJ
cord-001207-yjaiybwf	204	6	diversification	diversification	NN
cord-001207-yjaiybwf	204	7	of	of	IN
cord-001207-yjaiybwf	204	8	the	the	DT
cord-001207-yjaiybwf	204	9	bacterial	bacterial	JJ
cord-001207-yjaiybwf	204	10	enteric	enteric	JJ
cord-001207-yjaiybwf	204	11	flora	flora	NNS
cord-001207-yjaiybwf	204	12	,	,	,
cord-001207-yjaiybwf	204	13	which	which	WDT
cord-001207-yjaiybwf	204	14	serves	serve	VBZ
cord-001207-yjaiybwf	204	15	as	as	IN
cord-001207-yjaiybwf	204	16	the	the	DT
cord-001207-yjaiybwf	204	17	host	host	NN
cord-001207-yjaiybwf	204	18	pool	pool	NN
cord-001207-yjaiybwf	204	19	for	for	IN
cord-001207-yjaiybwf	204	20	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	204	21	,	,	,
cord-001207-yjaiybwf	204	22	would	would	MD
cord-001207-yjaiybwf	204	23	also	also	RB
cord-001207-yjaiybwf	204	24	explain	explain	VB
cord-001207-yjaiybwf	204	25	the	the	DT
cord-001207-yjaiybwf	204	26	increasing	increase	VBG
cord-001207-yjaiybwf	204	27	diversification	diversification	NN
cord-001207-yjaiybwf	204	28	of	of	IN
cord-001207-yjaiybwf	204	29	the	the	DT
cord-001207-yjaiybwf	204	30	virus	virus	NN
cord-001207-yjaiybwf	204	31	flora	flora	NNS
cord-001207-yjaiybwf	204	32	by	by	IN
cord-001207-yjaiybwf	204	33	age	age	NN
cord-001207-yjaiybwf	204	34	.	.	.
cord-001207-yjaiybwf	205	1	An	an	DT
cord-001207-yjaiybwf	205	2	increasing	increase	VBG
cord-001207-yjaiybwf	205	3	diversity	diversity	NN
cord-001207-yjaiybwf	205	4	of	of	IN
cord-001207-yjaiybwf	205	5	the	the	DT
cord-001207-yjaiybwf	205	6	virus	virus	NN
cord-001207-yjaiybwf	205	7	species	species	NN
cord-001207-yjaiybwf	205	8	in	in	IN
cord-001207-yjaiybwf	205	9	faeces	faece	NNS
cord-001207-yjaiybwf	205	10	of	of	IN
cord-001207-yjaiybwf	205	11	humans	human	NNS
cord-001207-yjaiybwf	205	12	has	have	VBZ
cord-001207-yjaiybwf	205	13	already	already	RB
cord-001207-yjaiybwf	205	14	been	be	VBN
cord-001207-yjaiybwf	205	15	described	describe	VBN
cord-001207-yjaiybwf	205	16	[	[	-LRB-
cord-001207-yjaiybwf	205	17	24	24	CD
cord-001207-yjaiybwf	205	18	]	]	-RRB-
cord-001207-yjaiybwf	205	19	.	.	.
cord-001207-yjaiybwf	206	1	In	in	IN
cord-001207-yjaiybwf	206	2	contrast	contrast	NN
cord-001207-yjaiybwf	206	3	to	to	IN
cord-001207-yjaiybwf	206	4	the	the	DT
cord-001207-yjaiybwf	206	5	age	age	NN
cord-001207-yjaiybwf	206	6	-	-	HYPH
cord-001207-yjaiybwf	206	7	related	relate	VBN
cord-001207-yjaiybwf	206	8	effect	effect	NN
cord-001207-yjaiybwf	206	9	,	,	,
cord-001207-yjaiybwf	206	10	no	no	DT
cord-001207-yjaiybwf	206	11	clear	clear	JJ
cord-001207-yjaiybwf	206	12	differences	difference	NNS
cord-001207-yjaiybwf	206	13	could	could	MD
cord-001207-yjaiybwf	206	14	be	be	VB
cord-001207-yjaiybwf	206	15	detected	detect	VBN
cord-001207-yjaiybwf	206	16	in	in	IN
cord-001207-yjaiybwf	206	17	the	the	DT
cord-001207-yjaiybwf	206	18	composition	composition	NN
cord-001207-yjaiybwf	206	19	of	of	IN
cord-001207-yjaiybwf	206	20	the	the	DT
cord-001207-yjaiybwf	206	21	faecal	faecal	JJ
cord-001207-yjaiybwf	206	22	viromes	virome	NNS
cord-001207-yjaiybwf	206	23	according	accord	VBG
cord-001207-yjaiybwf	206	24	to	to	IN
cord-001207-yjaiybwf	206	25	feeding	feed	VBG
cord-001207-yjaiybwf	206	26	with	with	IN
cord-001207-yjaiybwf	206	27	the	the	DT
cord-001207-yjaiybwf	206	28	probiotic	probiotic	JJ
cord-001207-yjaiybwf	206	29	bacterium	bacterium	NN
cord-001207-yjaiybwf	206	30	E.	E.	NNP
cord-001207-yjaiybwf	206	31	faecium	faecium	NN
cord-001207-yjaiybwf	207	1	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	207	2	10415	10415	CD
cord-001207-yjaiybwf	207	3	.	.	.
cord-001207-yjaiybwf	208	1	A	a	DT
cord-001207-yjaiybwf	208	2	relatively	relatively	RB
cord-001207-yjaiybwf	208	3	high	high	JJ
cord-001207-yjaiybwf	208	4	percentage	percentage	NN
cord-001207-yjaiybwf	208	5	of	of	IN
cord-001207-yjaiybwf	208	6	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	208	7	phages	phage	NNS
cord-001207-yjaiybwf	208	8	in	in	IN
cord-001207-yjaiybwf	208	9	the	the	DT
cord-001207-yjaiybwf	208	10	sample	sample	NN
cord-001207-yjaiybwf	208	11	derived	derive	VBN
cord-001207-yjaiybwf	208	12	from	from	IN
cord-001207-yjaiybwf	208	13	an	an	DT
cord-001207-yjaiybwf	208	14	E.	E.	NNP
cord-001207-yjaiybwf	208	15	faecium	faecium	NN
cord-001207-yjaiybwf	208	16	-	-	HYPH
cord-001207-yjaiybwf	208	17	feeded	feed	VBN
cord-001207-yjaiybwf	208	18	group	group	NN
cord-001207-yjaiybwf	208	19	may	may	MD
cord-001207-yjaiybwf	208	20	indicate	indicate	VB
cord-001207-yjaiybwf	208	21	multiplication	multiplication	NN
cord-001207-yjaiybwf	208	22	of	of	IN
cord-001207-yjaiybwf	208	23	the	the	DT
cord-001207-yjaiybwf	208	24	phage	phage	NN
cord-001207-yjaiybwf	208	25	due	due	IN
cord-001207-yjaiybwf	208	26	to	to	IN
cord-001207-yjaiybwf	208	27	the	the	DT
cord-001207-yjaiybwf	208	28	application	application	NN
cord-001207-yjaiybwf	208	29	of	of	IN
cord-001207-yjaiybwf	208	30	its	-PRON-	PRP$
cord-001207-yjaiybwf	208	31	host	host	NN
cord-001207-yjaiybwf	208	32	.	.	.
cord-001207-yjaiybwf	209	1	This	this	DT
cord-001207-yjaiybwf	209	2	explanation	explanation	NN
cord-001207-yjaiybwf	209	3	may	may	MD
cord-001207-yjaiybwf	209	4	indicate	indicate	VB
cord-001207-yjaiybwf	209	5	that	that	IN
cord-001207-yjaiybwf	209	6	a	a	DT
cord-001207-yjaiybwf	209	7	larger	large	JJR
cord-001207-yjaiybwf	209	8	amount	amount	NN
cord-001207-yjaiybwf	209	9	of	of	IN
cord-001207-yjaiybwf	209	10	the	the	DT
cord-001207-yjaiybwf	209	11	probiotic	probiotic	JJ
cord-001207-yjaiybwf	209	12	bacteria	bacteria	NNS
cord-001207-yjaiybwf	209	13	may	may	MD
cord-001207-yjaiybwf	209	14	be	be	VB
cord-001207-yjaiybwf	209	15	lysed	lyse	VBN
cord-001207-yjaiybwf	209	16	by	by	IN
cord-001207-yjaiybwf	209	17	the	the	DT
cord-001207-yjaiybwf	209	18	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	209	19	and	and	CC
cord-001207-yjaiybwf	209	20	are	be	VBP
cord-001207-yjaiybwf	209	21	therefore	therefore	RB
cord-001207-yjaiybwf	209	22	not	not	RB
cord-001207-yjaiybwf	209	23	available	available	JJ
cord-001207-yjaiybwf	209	24	for	for	IN
cord-001207-yjaiybwf	209	25	the	the	DT
cord-001207-yjaiybwf	209	26	probiotic	probiotic	JJ
cord-001207-yjaiybwf	209	27	therapy	therapy	NN
cord-001207-yjaiybwf	209	28	;	;	:
cord-001207-yjaiybwf	209	29	however	however	RB
cord-001207-yjaiybwf	209	30	,	,	,
cord-001207-yjaiybwf	209	31	this	this	DT
cord-001207-yjaiybwf	209	32	interpretation	interpretation	NN
cord-001207-yjaiybwf	209	33	is	be	VBZ
cord-001207-yjaiybwf	209	34	questionable	questionable	JJ
cord-001207-yjaiybwf	209	35	as	as	IN
cord-001207-yjaiybwf	209	36	the	the	DT
cord-001207-yjaiybwf	209	37	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	209	38	were	be	VBD
cord-001207-yjaiybwf	209	39	only	only	RB
cord-001207-yjaiybwf	209	40	found	find	VBN
cord-001207-yjaiybwf	209	41	in	in	IN
cord-001207-yjaiybwf	209	42	one	one	CD
cord-001207-yjaiybwf	209	43	of	of	IN
cord-001207-yjaiybwf	209	44	the	the	DT
cord-001207-yjaiybwf	209	45	samples	sample	NNS
cord-001207-yjaiybwf	209	46	.	.	.
cord-001207-yjaiybwf	210	1	Also	also	RB
cord-001207-yjaiybwf	210	2	,	,	,
cord-001207-yjaiybwf	210	3	a	a	DT
cord-001207-yjaiybwf	210	4	relative	relative	JJ
cord-001207-yjaiybwf	210	5	high	high	JJ
cord-001207-yjaiybwf	210	6	proportion	proportion	NN
cord-001207-yjaiybwf	210	7	of	of	IN
cord-001207-yjaiybwf	210	8	astrovirus	astrovirus	NNP
cord-001207-yjaiybwf	210	9	was	be	VBD
cord-001207-yjaiybwf	210	10	found	find	VBN
cord-001207-yjaiybwf	210	11	in	in	IN
cord-001207-yjaiybwf	210	12	one	one	CD
cord-001207-yjaiybwf	210	13	of	of	IN
cord-001207-yjaiybwf	210	14	the	the	DT
cord-001207-yjaiybwf	210	15	samples	sample	NNS
cord-001207-yjaiybwf	210	16	of	of	IN
cord-001207-yjaiybwf	210	17	the	the	DT
cord-001207-yjaiybwf	210	18	control	control	NN
cord-001207-yjaiybwf	210	19	group	group	NN
cord-001207-yjaiybwf	210	20	.	.	.
cord-001207-yjaiybwf	211	1	Interestingly	interestingly	RB
cord-001207-yjaiybwf	211	2	,	,	,
cord-001207-yjaiybwf	211	3	real	real	JJ
cord-001207-yjaiybwf	211	4	-	-	HYPH
cord-001207-yjaiybwf	211	5	time	time	NN
cord-001207-yjaiybwf	211	6	RT	rt	NN
cord-001207-yjaiybwf	211	7	-	-	HYPH
cord-001207-yjaiybwf	211	8	PCR	PCR	NNP
cord-001207-yjaiybwf	211	9	analyses	analysis	NNS
cord-001207-yjaiybwf	211	10	of	of	IN
cord-001207-yjaiybwf	211	11	samples	sample	NNS
cord-001207-yjaiybwf	211	12	derived	derive	VBN
cord-001207-yjaiybwf	211	13	from	from	IN
cord-001207-yjaiybwf	211	14	the	the	DT
cord-001207-yjaiybwf	211	15	same	same	JJ
cord-001207-yjaiybwf	211	16	feeding	feeding	NN
cord-001207-yjaiybwf	211	17	trial	trial	NN
cord-001207-yjaiybwf	211	18	confirmed	confirm	VBD
cord-001207-yjaiybwf	211	19	the	the	DT
cord-001207-yjaiybwf	211	20	presence	presence	NN
cord-001207-yjaiybwf	211	21	of	of	IN
cord-001207-yjaiybwf	211	22	astrovirus	astrovirus	NNP
cord-001207-yjaiybwf	211	23	exclusively	exclusively	RB
cord-001207-yjaiybwf	211	24	in	in	IN
cord-001207-yjaiybwf	211	25	the	the	DT
cord-001207-yjaiybwf	211	26	control	control	NN
cord-001207-yjaiybwf	211	27	group	group	NN
cord-001207-yjaiybwf	211	28	[	[	-LRB-
cord-001207-yjaiybwf	211	29	30	30	CD
cord-001207-yjaiybwf	211	30	]	]	-RRB-
cord-001207-yjaiybwf	211	31	.	.	.
cord-001207-yjaiybwf	212	1	However	however	RB
cord-001207-yjaiybwf	212	2	,	,	,
cord-001207-yjaiybwf	212	3	the	the	DT
cord-001207-yjaiybwf	212	4	same	same	JJ
cord-001207-yjaiybwf	212	5	study	study	NN
cord-001207-yjaiybwf	212	6	indicated	indicate	VBD
cord-001207-yjaiybwf	212	7	later	later	RB
cord-001207-yjaiybwf	212	8	shedding	shed	VBG
cord-001207-yjaiybwf	212	9	of	of	IN
cord-001207-yjaiybwf	212	10	rotaviruses	rotavirus	NNS
cord-001207-yjaiybwf	212	11	with	with	IN
cord-001207-yjaiybwf	212	12	lower	low	JJR
cord-001207-yjaiybwf	212	13	amounts	amount	NNS
cord-001207-yjaiybwf	212	14	in	in	IN
cord-001207-yjaiybwf	212	15	the	the	DT
cord-001207-yjaiybwf	212	16	probiotic	probiotic	JJ
cord-001207-yjaiybwf	212	17	group	group	NN
cord-001207-yjaiybwf	212	18	as	as	IN
cord-001207-yjaiybwf	212	19	compared	compare	VBN
cord-001207-yjaiybwf	212	20	to	to	IN
cord-001207-yjaiybwf	212	21	the	the	DT
cord-001207-yjaiybwf	212	22	control	control	NN
cord-001207-yjaiybwf	212	23	group	group	NN
cord-001207-yjaiybwf	212	24	,	,	,
cord-001207-yjaiybwf	212	25	which	which	WDT
cord-001207-yjaiybwf	212	26	was	be	VBD
cord-001207-yjaiybwf	212	27	not	not	RB
cord-001207-yjaiybwf	212	28	detected	detect	VBN
cord-001207-yjaiybwf	212	29	by	by	IN
cord-001207-yjaiybwf	212	30	our	-PRON-	PRP$
cord-001207-yjaiybwf	212	31	virome	virome	NN
cord-001207-yjaiybwf	212	32	analysis	analysis	NN
cord-001207-yjaiybwf	212	33	.	.	.
cord-001207-yjaiybwf	213	1	A	a	DT
cord-001207-yjaiybwf	213	2	closer	close	JJR
cord-001207-yjaiybwf	213	3	inspection	inspection	NN
cord-001207-yjaiybwf	213	4	of	of	IN
cord-001207-yjaiybwf	213	5	the	the	DT
cord-001207-yjaiybwf	213	6	data	datum	NNS
cord-001207-yjaiybwf	213	7	shows	show	VBZ
cord-001207-yjaiybwf	213	8	that	that	IN
cord-001207-yjaiybwf	213	9	up	up	IN
cord-001207-yjaiybwf	213	10	to	to	TO
cord-001207-yjaiybwf	213	11	10	10	CD
cord-001207-yjaiybwf	213	12	7	7	CD
cord-001207-yjaiybwf	213	13	astroviruses	astroviruse	NNS
cord-001207-yjaiybwf	213	14	per	per	IN
cord-001207-yjaiybwf	213	15	gram	gram	NN
cord-001207-yjaiybwf	213	16	faeces	faece	NNS
cord-001207-yjaiybwf	213	17	were	be	VBD
cord-001207-yjaiybwf	213	18	present	present	JJ
cord-001207-yjaiybwf	213	19	in	in	IN
cord-001207-yjaiybwf	213	20	the	the	DT
cord-001207-yjaiybwf	213	21	samples	sample	NNS
cord-001207-yjaiybwf	213	22	,	,	,
cord-001207-yjaiybwf	213	23	whereas	whereas	IN
cord-001207-yjaiybwf	213	24	only	only	RB
cord-001207-yjaiybwf	213	25	up	up	IN
cord-001207-yjaiybwf	213	26	to	to	TO
cord-001207-yjaiybwf	213	27	10	10	CD
cord-001207-yjaiybwf	213	28	5	5	CD
cord-001207-yjaiybwf	213	29	rotaviruses	rotavirus	NNS
cord-001207-yjaiybwf	213	30	per	per	IN
cord-001207-yjaiybwf	213	31	gram	gram	NN
cord-001207-yjaiybwf	213	32	were	be	VBD
cord-001207-yjaiybwf	213	33	detected	detect	VBN
cord-001207-yjaiybwf	213	34	[	[	-LRB-
cord-001207-yjaiybwf	213	35	30	30	CD
cord-001207-yjaiybwf	213	36	]	]	-RRB-
cord-001207-yjaiybwf	213	37	.	.	.
cord-001207-yjaiybwf	214	1	Therefore	therefore	RB
cord-001207-yjaiybwf	214	2	,	,	,
cord-001207-yjaiybwf	214	3	a	a	DT
cord-001207-yjaiybwf	214	4	lower	low	JJR
cord-001207-yjaiybwf	214	5	sensitivity	sensitivity	NN
cord-001207-yjaiybwf	214	6	of	of	IN
cord-001207-yjaiybwf	214	7	the	the	DT
cord-001207-yjaiybwf	214	8	virome	virome	NNP
cord-001207-yjaiybwf	214	9	analysis	analysis	NN
cord-001207-yjaiybwf	214	10	method	method	NN
cord-001207-yjaiybwf	214	11	may	may	MD
cord-001207-yjaiybwf	214	12	explain	explain	VB
cord-001207-yjaiybwf	214	13	the	the	DT
cord-001207-yjaiybwf	214	14	discrepancies	discrepancy	NNS
cord-001207-yjaiybwf	214	15	and	and	CC
cord-001207-yjaiybwf	214	16	still	still	RB
cord-001207-yjaiybwf	214	17	deeper	deep	JJR
cord-001207-yjaiybwf	214	18	sequencings	sequencing	NNS
cord-001207-yjaiybwf	214	19	may	may	MD
cord-001207-yjaiybwf	214	20	be	be	VB
cord-001207-yjaiybwf	214	21	necessary	necessary	JJ
cord-001207-yjaiybwf	214	22	in	in	IN
cord-001207-yjaiybwf	214	23	future	future	NN
cord-001207-yjaiybwf	214	24	to	to	TO
cord-001207-yjaiybwf	214	25	detect	detect	VB
cord-001207-yjaiybwf	214	26	more	more	RBR
cord-001207-yjaiybwf	214	27	subtle	subtle	JJ
cord-001207-yjaiybwf	214	28	changes	change	NNS
cord-001207-yjaiybwf	214	29	in	in	IN
cord-001207-yjaiybwf	214	30	the	the	DT
cord-001207-yjaiybwf	214	31	faecal	faecal	JJ
cord-001207-yjaiybwf	214	32	virome	virome	NN
cord-001207-yjaiybwf	214	33	composition	composition	NN
cord-001207-yjaiybwf	214	34	due	due	IN
cord-001207-yjaiybwf	214	35	to	to	IN
cord-001207-yjaiybwf	214	36	probiotic	probiotic	JJ
cord-001207-yjaiybwf	214	37	feeding	feeding	NN
cord-001207-yjaiybwf	214	38	.	.	.
cord-001207-yjaiybwf	215	1	The	the	DT
cord-001207-yjaiybwf	215	2	composition	composition	NN
cord-001207-yjaiybwf	215	3	of	of	IN
cord-001207-yjaiybwf	215	4	the	the	DT
cord-001207-yjaiybwf	215	5	identified	identify	VBN
cord-001207-yjaiybwf	215	6	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	215	7	species	specie	NNS
cord-001207-yjaiybwf	215	8	in	in	IN
cord-001207-yjaiybwf	215	9	the	the	DT
cord-001207-yjaiybwf	215	10	different	different	JJ
cord-001207-yjaiybwf	215	11	samples	sample	NNS
cord-001207-yjaiybwf	215	12	revealed	reveal	VBD
cord-001207-yjaiybwf	215	13	no	no	DT
cord-001207-yjaiybwf	215	14	consistent	consistent	JJ
cord-001207-yjaiybwf	215	15	pattern	pattern	NN
cord-001207-yjaiybwf	215	16	.	.	.
cord-001207-yjaiybwf	216	1	However	however	RB
cord-001207-yjaiybwf	216	2	,	,	,
cord-001207-yjaiybwf	216	3	most	most	JJS
cord-001207-yjaiybwf	216	4	of	of	IN
cord-001207-yjaiybwf	216	5	the	the	DT
cord-001207-yjaiybwf	216	6	detected	detect	VBN
cord-001207-yjaiybwf	216	7	sequence	sequence	NN
cord-001207-yjaiybwf	216	8	reads	read	NNS
cord-001207-yjaiybwf	216	9	showed	show	VBD
cord-001207-yjaiybwf	216	10	only	only	RB
cord-001207-yjaiybwf	216	11	moderate	moderate	JJ
cord-001207-yjaiybwf	216	12	identities	identity	NNS
cord-001207-yjaiybwf	216	13	to	to	IN
cord-001207-yjaiybwf	216	14	the	the	DT
cord-001207-yjaiybwf	216	15	known	know	VBN
cord-001207-yjaiybwf	216	16	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	216	17	sequences	sequence	NNS
cord-001207-yjaiybwf	216	18	present	present	JJ
cord-001207-yjaiybwf	216	19	in	in	IN
cord-001207-yjaiybwf	216	20	the	the	DT
cord-001207-yjaiybwf	216	21	database	database	NN
cord-001207-yjaiybwf	216	22	.	.	.
cord-001207-yjaiybwf	217	1	Therefore	therefore	RB
cord-001207-yjaiybwf	217	2	,	,	,
cord-001207-yjaiybwf	217	3	it	-PRON-	PRP
cord-001207-yjaiybwf	217	4	has	have	VBZ
cord-001207-yjaiybwf	217	5	to	to	TO
cord-001207-yjaiybwf	217	6	be	be	VB
cord-001207-yjaiybwf	217	7	considered	consider	VBN
cord-001207-yjaiybwf	217	8	that	that	IN
cord-001207-yjaiybwf	217	9	the	the	DT
cord-001207-yjaiybwf	217	10	majority	majority	NN
cord-001207-yjaiybwf	217	11	of	of	IN
cord-001207-yjaiybwf	217	12	the	the	DT
cord-001207-yjaiybwf	217	13	detected	detect	VBN
cord-001207-yjaiybwf	217	14	sequences	sequence	NNS
cord-001207-yjaiybwf	217	15	belong	belong	VBP
cord-001207-yjaiybwf	217	16	to	to	IN
cord-001207-yjaiybwf	217	17	so	so	RB
cord-001207-yjaiybwf	217	18	far	far	RB
cord-001207-yjaiybwf	217	19	unknown	unknown	JJ
cord-001207-yjaiybwf	217	20	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	217	21	and	and	CC
cord-001207-yjaiybwf	217	22	that	that	IN
cord-001207-yjaiybwf	217	23	the	the	DT
cord-001207-yjaiybwf	217	24	identified	identify	VBN
cord-001207-yjaiybwf	217	25	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	217	26	species	specie	NNS
cord-001207-yjaiybwf	217	27	represent	represent	VBP
cord-001207-yjaiybwf	217	28	only	only	RB
cord-001207-yjaiybwf	217	29	their	-PRON-	PRP$
cord-001207-yjaiybwf	217	30	next	next	JJ
cord-001207-yjaiybwf	217	31	relatives	relative	NNS
cord-001207-yjaiybwf	217	32	.	.	.
cord-001207-yjaiybwf	218	1	A	a	DT
cord-001207-yjaiybwf	218	2	definitive	definitive	JJ
cord-001207-yjaiybwf	218	3	assignment	assignment	NN
cord-001207-yjaiybwf	218	4	of	of	IN
cord-001207-yjaiybwf	218	5	a	a	DT
cord-001207-yjaiybwf	218	6	host	host	NN
cord-001207-yjaiybwf	218	7	to	to	IN
cord-001207-yjaiybwf	218	8	these	these	DT
cord-001207-yjaiybwf	218	9	sequences	sequence	NNS
cord-001207-yjaiybwf	218	10	is	be	VBZ
cord-001207-yjaiybwf	218	11	therefore	therefore	RB
cord-001207-yjaiybwf	218	12	currently	currently	RB
cord-001207-yjaiybwf	218	13	not	not	RB
cord-001207-yjaiybwf	218	14	possible	possible	JJ
cord-001207-yjaiybwf	218	15	.	.	.
cord-001207-yjaiybwf	219	1	The	the	DT
cord-001207-yjaiybwf	219	2	quality	quality	NN
cord-001207-yjaiybwf	219	3	of	of	IN
cord-001207-yjaiybwf	219	4	the	the	DT
cord-001207-yjaiybwf	219	5	database	database	NN
cord-001207-yjaiybwf	219	6	with	with	IN
cord-001207-yjaiybwf	219	7	regard	regard	NN
cord-001207-yjaiybwf	219	8	to	to	IN
cord-001207-yjaiybwf	219	9	genomic	genomic	JJ
cord-001207-yjaiybwf	219	10	sequences	sequence	NNS
cord-001207-yjaiybwf	219	11	of	of	IN
cord-001207-yjaiybwf	219	12	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	219	13	is	be	VBZ
cord-001207-yjaiybwf	219	14	crucial	crucial	JJ
cord-001207-yjaiybwf	219	15	for	for	IN
cord-001207-yjaiybwf	219	16	virome	virome	NN
cord-001207-yjaiybwf	219	17	analyses	analysis	NNS
cord-001207-yjaiybwf	219	18	.	.	.
cord-001207-yjaiybwf	220	1	For	for	IN
cord-001207-yjaiybwf	220	2	example	example	NN
cord-001207-yjaiybwf	220	3	,	,	,
cord-001207-yjaiybwf	220	4	the	the	DT
cord-001207-yjaiybwf	220	5	high	high	JJ
cord-001207-yjaiybwf	220	6	proportion	proportion	NN
cord-001207-yjaiybwf	220	7	of	of	IN
cord-001207-yjaiybwf	220	8	the	the	DT
cord-001207-yjaiybwf	220	9	detected	detect	VBN
cord-001207-yjaiybwf	220	10	Lactococcus	Lactococcus	NNP
cord-001207-yjaiybwf	220	11	phage	phage	NN
cord-001207-yjaiybwf	220	12	1706	1706	CD
cord-001207-yjaiybwf	220	13	may	may	MD
cord-001207-yjaiybwf	220	14	reflect	reflect	VB
cord-001207-yjaiybwf	220	15	the	the	DT
cord-001207-yjaiybwf	220	16	disproportionately	disproportionately	RB
cord-001207-yjaiybwf	220	17	high	high	JJ
cord-001207-yjaiybwf	220	18	abundance	abundance	NN
cord-001207-yjaiybwf	220	19	of	of	IN
cord-001207-yjaiybwf	220	20	those	those	DT
cord-001207-yjaiybwf	220	21	phage	phage	NN
cord-001207-yjaiybwf	220	22	sequences	sequence	NNS
cord-001207-yjaiybwf	220	23	in	in	IN
cord-001207-yjaiybwf	220	24	the	the	DT
cord-001207-yjaiybwf	220	25	database	database	NN
cord-001207-yjaiybwf	220	26	as	as	IN
cord-001207-yjaiybwf	220	27	a	a	DT
cord-001207-yjaiybwf	220	28	consequence	consequence	NN
cord-001207-yjaiybwf	220	29	of	of	IN
cord-001207-yjaiybwf	220	30	intensive	intensive	JJ
cord-001207-yjaiybwf	220	31	research	research	NN
cord-001207-yjaiybwf	220	32	on	on	IN
cord-001207-yjaiybwf	220	33	these	these	DT
cord-001207-yjaiybwf	220	34	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	220	35	,	,	,
cord-001207-yjaiybwf	220	36	which	which	WDT
cord-001207-yjaiybwf	220	37	are	be	VBP
cord-001207-yjaiybwf	220	38	problematic	problematic	JJ
cord-001207-yjaiybwf	220	39	agents	agent	NNS
cord-001207-yjaiybwf	220	40	for	for	IN
cord-001207-yjaiybwf	220	41	the	the	DT
cord-001207-yjaiybwf	220	42	diary	diary	NN
cord-001207-yjaiybwf	220	43	cheese	cheese	NN
cord-001207-yjaiybwf	220	44	product	product	NN
cord-001207-yjaiybwf	220	45	industry	industry	NN
cord-001207-yjaiybwf	220	46	[	[	-LRB-
cord-001207-yjaiybwf	220	47	50	50	CD
cord-001207-yjaiybwf	220	48	]	]	-RRB-
cord-001207-yjaiybwf	220	49	.	.	.
cord-001207-yjaiybwf	221	1	In	in	IN
cord-001207-yjaiybwf	221	2	contrast	contrast	NN
cord-001207-yjaiybwf	221	3	,	,	,
cord-001207-yjaiybwf	221	4	for	for	IN
cord-001207-yjaiybwf	221	5	another	another	DT
cord-001207-yjaiybwf	221	6	highly	highly	RB
cord-001207-yjaiybwf	221	7	abundant	abundant	JJ
cord-001207-yjaiybwf	221	8	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	221	9	,	,	,
cord-001207-yjaiybwf	221	10	the	the	DT
cord-001207-yjaiybwf	221	11	dragonfly	dragonfly	NN
cord-001207-yjaiybwf	221	12	-	-	HYPH
cord-001207-yjaiybwf	221	13	associated	associate	VBN
cord-001207-yjaiybwf	221	14	microphage	microphage	NN
cord-001207-yjaiybwf	221	15	,	,	,
cord-001207-yjaiybwf	221	16	the	the	DT
cord-001207-yjaiybwf	221	17	specific	specific	JJ
cord-001207-yjaiybwf	221	18	bacterial	bacterial	JJ
cord-001207-yjaiybwf	221	19	host	host	NN
cord-001207-yjaiybwf	221	20	is	be	VBZ
cord-001207-yjaiybwf	221	21	still	still	RB
cord-001207-yjaiybwf	221	22	unknown	unknown	JJ
cord-001207-yjaiybwf	221	23	[	[	-LRB-
cord-001207-yjaiybwf	221	24	51	51	CD
cord-001207-yjaiybwf	221	25	]	]	-RRB-
cord-001207-yjaiybwf	221	26	.	.	.
cord-001207-yjaiybwf	222	1	An	an	DT
cord-001207-yjaiybwf	222	2	increase	increase	NN
cord-001207-yjaiybwf	222	3	of	of	IN
cord-001207-yjaiybwf	222	4	annotated	annotate	VBN
cord-001207-yjaiybwf	222	5	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	222	6	sequences	sequence	NNS
cord-001207-yjaiybwf	222	7	in	in	IN
cord-001207-yjaiybwf	222	8	the	the	DT
cord-001207-yjaiybwf	222	9	databases	database	NNS
cord-001207-yjaiybwf	222	10	is	be	VBZ
cord-001207-yjaiybwf	222	11	therefore	therefore	RB
cord-001207-yjaiybwf	222	12	a	a	DT
cord-001207-yjaiybwf	222	13	prerequisite	prerequisite	NN
cord-001207-yjaiybwf	222	14	for	for	IN
cord-001207-yjaiybwf	222	15	studies	study	NNS
cord-001207-yjaiybwf	222	16	on	on	IN
cord-001207-yjaiybwf	222	17	the	the	DT
cord-001207-yjaiybwf	222	18	interactions	interaction	NNS
cord-001207-yjaiybwf	222	19	between	between	IN
cord-001207-yjaiybwf	222	20	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	222	21	and	and	CC
cord-001207-yjaiybwf	222	22	their	-PRON-	PRP$
cord-001207-yjaiybwf	222	23	host	host	NN
cord-001207-yjaiybwf	222	24	bacteria	bacteria	NNS
cord-001207-yjaiybwf	222	25	in	in	IN
cord-001207-yjaiybwf	222	26	the	the	DT
cord-001207-yjaiybwf	222	27	gut	gut	NN
cord-001207-yjaiybwf	222	28	in	in	IN
cord-001207-yjaiybwf	222	29	future	future	NN
cord-001207-yjaiybwf	222	30	.	.	.
cord-001207-yjaiybwf	223	1	Alternatively	alternatively	RB
cord-001207-yjaiybwf	223	2	,	,	,
cord-001207-yjaiybwf	223	3	a	a	DT
cord-001207-yjaiybwf	223	4	deeper	deep	JJR
cord-001207-yjaiybwf	223	5	sequencing	sequencing	NN
cord-001207-yjaiybwf	223	6	may	may	MD
cord-001207-yjaiybwf	223	7	enable	enable	VB
cord-001207-yjaiybwf	223	8	the	the	DT
cord-001207-yjaiybwf	223	9	assembly	assembly	NN
cord-001207-yjaiybwf	223	10	of	of	IN
cord-001207-yjaiybwf	223	11	complete	complete	JJ
cord-001207-yjaiybwf	223	12	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	223	13	genome	genome	NN
cord-001207-yjaiybwf	223	14	sequences	sequence	NNS
cord-001207-yjaiybwf	223	15	from	from	IN
cord-001207-yjaiybwf	223	16	the	the	DT
cord-001207-yjaiybwf	223	17	metagenomic	metagenomic	NNP
cord-001207-yjaiybwf	223	18	data	data	NNP
cord-001207-yjaiybwf	223	19	set	set	NN
cord-001207-yjaiybwf	223	20	.	.	.
cord-001207-yjaiybwf	224	1	By	by	IN
cord-001207-yjaiybwf	224	2	this	this	DT
cord-001207-yjaiybwf	224	3	,	,	,
cord-001207-yjaiybwf	224	4	an	an	DT
cord-001207-yjaiybwf	224	5	assignment	assignment	NN
cord-001207-yjaiybwf	224	6	to	to	IN
cord-001207-yjaiybwf	224	7	their	-PRON-	PRP$
cord-001207-yjaiybwf	224	8	hosts	host	NNS
cord-001207-yjaiybwf	224	9	was	be	VBD
cord-001207-yjaiybwf	224	10	possible	possible	JJ
cord-001207-yjaiybwf	224	11	by	by	IN
cord-001207-yjaiybwf	224	12	identification	identification	NN
cord-001207-yjaiybwf	224	13	of	of	IN
cord-001207-yjaiybwf	224	14	inserted	insert	VBN
cord-001207-yjaiybwf	224	15	host	host	NN
cord-001207-yjaiybwf	224	16	-	-	HYPH
cord-001207-yjaiybwf	224	17	related	relate	VBN
cord-001207-yjaiybwf	224	18	sequences	sequence	NNS
cord-001207-yjaiybwf	224	19	as	as	IN
cord-001207-yjaiybwf	224	20	recently	recently	RB
cord-001207-yjaiybwf	224	21	described	describe	VBD
cord-001207-yjaiybwf	224	22	[	[	-LRB-
cord-001207-yjaiybwf	224	23	3	3	CD
cord-001207-yjaiybwf	224	24	]	]	-RRB-
cord-001207-yjaiybwf	224	25	.	.	.
cord-001207-yjaiybwf	225	1	In	in	IN
cord-001207-yjaiybwf	225	2	summary	summary	NN
cord-001207-yjaiybwf	225	3	the	the	DT
cord-001207-yjaiybwf	225	4	data	datum	NNS
cord-001207-yjaiybwf	225	5	show	show	VBP
cord-001207-yjaiybwf	225	6	a	a	DT
cord-001207-yjaiybwf	225	7	high	high	JJ
cord-001207-yjaiybwf	225	8	variability	variability	NN
cord-001207-yjaiybwf	225	9	of	of	IN
cord-001207-yjaiybwf	225	10	the	the	DT
cord-001207-yjaiybwf	225	11	pig	pig	NN
cord-001207-yjaiybwf	225	12	faecal	faecal	JJ
cord-001207-yjaiybwf	225	13	virome	virome	NNP
cord-001207-yjaiybwf	225	14	.	.	.
cord-001207-yjaiybwf	226	1	Most	most	RBS
cord-001207-yjaiybwf	226	2	obvious	obvious	JJ
cord-001207-yjaiybwf	226	3	are	be	VBP
cord-001207-yjaiybwf	226	4	age	age	NN
cord-001207-yjaiybwf	226	5	-	-	HYPH
cord-001207-yjaiybwf	226	6	related	relate	VBN
cord-001207-yjaiybwf	226	7	differences	difference	NNS
cord-001207-yjaiybwf	226	8	in	in	IN
cord-001207-yjaiybwf	226	9	the	the	DT
cord-001207-yjaiybwf	226	10	proportion	proportion	NN
cord-001207-yjaiybwf	226	11	between	between	IN
cord-001207-yjaiybwf	226	12	pig	pig	NN
cord-001207-yjaiybwf	226	13	viruses	virus	NNS
cord-001207-yjaiybwf	226	14	and	and	CC
cord-001207-yjaiybwf	226	15	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	226	16	as	as	RB
cord-001207-yjaiybwf	226	17	well	well	RB
cord-001207-yjaiybwf	226	18	as	as	IN
cord-001207-yjaiybwf	226	19	an	an	DT
cord-001207-yjaiybwf	226	20	increasing	increase	VBG
cord-001207-yjaiybwf	226	21	diversification	diversification	NN
cord-001207-yjaiybwf	226	22	of	of	IN
cord-001207-yjaiybwf	226	23	virus	virus	NN
cord-001207-yjaiybwf	226	24	species	specie	NNS
cord-001207-yjaiybwf	226	25	by	by	IN
cord-001207-yjaiybwf	226	26	age	age	NN
cord-001207-yjaiybwf	226	27	.	.	.
cord-001207-yjaiybwf	227	1	Consistent	consistent	JJ
cord-001207-yjaiybwf	227	2	differences	difference	NNS
cord-001207-yjaiybwf	227	3	due	due	JJ
cord-001207-yjaiybwf	227	4	to	to	IN
cord-001207-yjaiybwf	227	5	probiotic	probiotic	JJ
cord-001207-yjaiybwf	227	6	feeding	feeding	NN
cord-001207-yjaiybwf	227	7	could	could	MD
cord-001207-yjaiybwf	227	8	not	not	RB
cord-001207-yjaiybwf	227	9	be	be	VB
cord-001207-yjaiybwf	227	10	identified	identify	VBN
cord-001207-yjaiybwf	227	11	by	by	IN
cord-001207-yjaiybwf	227	12	our	-PRON-	PRP$
cord-001207-yjaiybwf	227	13	metagenomic	metagenomic	NNP
cord-001207-yjaiybwf	227	14	analysis	analysis	NN
cord-001207-yjaiybwf	227	15	.	.	.
cord-001207-yjaiybwf	228	1	The	the	DT
cord-001207-yjaiybwf	228	2	results	result	NNS
cord-001207-yjaiybwf	228	3	of	of	IN
cord-001207-yjaiybwf	228	4	comparative	comparative	JJ
cord-001207-yjaiybwf	228	5	pig	pig	NN
cord-001207-yjaiybwf	228	6	virome	virome	NNP
cord-001207-yjaiybwf	228	7	analyses	analysis	NNS
cord-001207-yjaiybwf	228	8	may	may	MD
cord-001207-yjaiybwf	228	9	help	help	VB
cord-001207-yjaiybwf	228	10	to	to	TO
cord-001207-yjaiybwf	228	11	understand	understand	VB
cord-001207-yjaiybwf	228	12	the	the	DT
cord-001207-yjaiybwf	228	13	complex	complex	JJ
cord-001207-yjaiybwf	228	14	interactions	interaction	NNS
cord-001207-yjaiybwf	228	15	between	between	IN
cord-001207-yjaiybwf	228	16	viruses	virus	NNS
cord-001207-yjaiybwf	228	17	,	,	,
cord-001207-yjaiybwf	228	18	bacteria	bacteria	NNS
cord-001207-yjaiybwf	228	19	and	and	CC
cord-001207-yjaiybwf	228	20	the	the	DT
cord-001207-yjaiybwf	228	21	pig	pig	NN
cord-001207-yjaiybwf	228	22	within	within	IN
cord-001207-yjaiybwf	228	23	the	the	DT
cord-001207-yjaiybwf	228	24	intestinal	intestinal	JJ
cord-001207-yjaiybwf	228	25	tract	tract	NN
cord-001207-yjaiybwf	228	26	.	.	.
cord-001207-yjaiybwf	229	1	Future	future	JJ
cord-001207-yjaiybwf	229	2	research	research	NN
cord-001207-yjaiybwf	229	3	should	should	MD
cord-001207-yjaiybwf	229	4	focus	focus	VB
cord-001207-yjaiybwf	229	5	on	on	IN
cord-001207-yjaiybwf	229	6	the	the	DT
cord-001207-yjaiybwf	229	7	optimization	optimization	NN
cord-001207-yjaiybwf	229	8	of	of	IN
cord-001207-yjaiybwf	229	9	the	the	DT
cord-001207-yjaiybwf	229	10	method	method	NN
cord-001207-yjaiybwf	229	11	in	in	IN
cord-001207-yjaiybwf	229	12	order	order	NN
cord-001207-yjaiybwf	229	13	to	to	TO
cord-001207-yjaiybwf	229	14	increase	increase	VB
cord-001207-yjaiybwf	229	15	its	-PRON-	PRP$
cord-001207-yjaiybwf	229	16	sensitivity	sensitivity	NN
cord-001207-yjaiybwf	229	17	and	and	CC
cord-001207-yjaiybwf	229	18	on	on	IN
cord-001207-yjaiybwf	229	19	the	the	DT
cord-001207-yjaiybwf	229	20	improvement	improvement	NN
cord-001207-yjaiybwf	229	21	of	of	IN
cord-001207-yjaiybwf	229	22	the	the	DT
cord-001207-yjaiybwf	229	23	sequence	sequence	NN
cord-001207-yjaiybwf	229	24	databases	database	NNS
cord-001207-yjaiybwf	229	25	,	,	,
cord-001207-yjaiybwf	229	26	especially	especially	RB
cord-001207-yjaiybwf	229	27	regarding	regard	VBG
cord-001207-yjaiybwf	229	28	annotated	annotate	VBN
cord-001207-yjaiybwf	229	29	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	229	30	sequences	sequence	NNS
cord-001207-yjaiybwf	229	31	.	.	.
cord-001207-yjaiybwf	230	1	It	-PRON-	PRP
cord-001207-yjaiybwf	230	2	will	will	MD
cord-001207-yjaiybwf	230	3	be	be	VB
cord-001207-yjaiybwf	230	4	interesting	interesting	JJ
cord-001207-yjaiybwf	230	5	to	to	TO
cord-001207-yjaiybwf	230	6	apply	apply	VB
cord-001207-yjaiybwf	230	7	the	the	DT
cord-001207-yjaiybwf	230	8	optimized	optimize	VBN
cord-001207-yjaiybwf	230	9	techniques	technique	NNS
cord-001207-yjaiybwf	230	10	to	to	TO
cord-001207-yjaiybwf	230	11	analyse	analyse	VB
cord-001207-yjaiybwf	230	12	the	the	DT
cord-001207-yjaiybwf	230	13	diversity	diversity	NN
cord-001207-yjaiybwf	230	14	of	of	IN
cord-001207-yjaiybwf	230	15	faecal	faecal	JJ
cord-001207-yjaiybwf	230	16	viromes	virome	NNS
cord-001207-yjaiybwf	230	17	in	in	IN
cord-001207-yjaiybwf	230	18	individuals	individual	NNS
cord-001207-yjaiybwf	230	19	and	and	CC
cord-001207-yjaiybwf	230	20	to	to	TO
cord-001207-yjaiybwf	230	21	identify	identify	VB
cord-001207-yjaiybwf	230	22	further	further	JJ
cord-001207-yjaiybwf	230	23	factors	factor	NNS
cord-001207-yjaiybwf	230	24	like	like	IN
cord-001207-yjaiybwf	230	25	geographical	geographical	JJ
cord-001207-yjaiybwf	230	26	origin	origin	NN
cord-001207-yjaiybwf	230	27	or	or	CC
cord-001207-yjaiybwf	230	28	disease	disease	NN
cord-001207-yjaiybwf	230	29	-	-	HYPH
cord-001207-yjaiybwf	230	30	related	relate	VBN
cord-001207-yjaiybwf	230	31	changes	change	NNS
cord-001207-yjaiybwf	230	32	influencing	influence	VBG
cord-001207-yjaiybwf	230	33	its	-PRON-	PRP$
cord-001207-yjaiybwf	230	34	composition	composition	NN
cord-001207-yjaiybwf	230	35	.	.	.
cord-001207-yjaiybwf	231	1	Table	table	NN
cord-001207-yjaiybwf	231	2	S1	S1	NNP
cord-001207-yjaiybwf	231	3	Relative	relative	JJ
cord-001207-yjaiybwf	231	4	abundance	abundance	NN
cord-001207-yjaiybwf	231	5	of	of	IN
cord-001207-yjaiybwf	231	6	virus	virus	NN
cord-001207-yjaiybwf	231	7	families	family	NNS
cord-001207-yjaiybwf	231	8	in	in	IN
cord-001207-yjaiybwf	231	9	the	the	DT
cord-001207-yjaiybwf	231	10	analyzed	analyze	VBN
cord-001207-yjaiybwf	231	11	faecal	faecal	JJ
cord-001207-yjaiybwf	231	12	viromes	virome	NNS
cord-001207-yjaiybwf	231	13	.	.	.
cord-001207-yjaiybwf	232	1	The	the	DT
cord-001207-yjaiybwf	232	2	table	table	NN
cord-001207-yjaiybwf	232	3	shows	show	VBZ
cord-001207-yjaiybwf	232	4	the	the	DT
cord-001207-yjaiybwf	232	5	number	number	NN
cord-001207-yjaiybwf	232	6	of	of	IN
cord-001207-yjaiybwf	232	7	reads	read	NNS
cord-001207-yjaiybwf	232	8	with	with	IN
cord-001207-yjaiybwf	232	9	sequence	sequence	NN
cord-001207-yjaiybwf	232	10	identities	identity	NNS
cord-001207-yjaiybwf	232	11	to	to	IN
cord-001207-yjaiybwf	232	12	a	a	DT
cord-001207-yjaiybwf	232	13	certain	certain	JJ
cord-001207-yjaiybwf	232	14	virus	virus	NN
cord-001207-yjaiybwf	232	15	family	family	NN
cord-001207-yjaiybwf	232	16	in	in	IN
cord-001207-yjaiybwf	232	17	relation	relation	NN
cord-001207-yjaiybwf	232	18	to	to	IN
cord-001207-yjaiybwf	232	19	all	all	DT
cord-001207-yjaiybwf	232	20	virus	virus	NN
cord-001207-yjaiybwf	232	21	reads	read	VBZ
cord-001207-yjaiybwf	232	22	(	(	-LRB-
cord-001207-yjaiybwf	232	23	in	in	IN
cord-001207-yjaiybwf	232	24	%	%	NN
cord-001207-yjaiybwf	232	25	)	)	-RRB-
cord-001207-yjaiybwf	232	26	.	.	.
cord-001207-yjaiybwf	233	1	Families	family	NNS
cord-001207-yjaiybwf	233	2	showing	show	VBG
cord-001207-yjaiybwf	233	3	an	an	DT
cord-001207-yjaiybwf	233	4	abundance	abundance	NN
cord-001207-yjaiybwf	233	5	of	of	IN
cord-001207-yjaiybwf	233	6	less	less	JJR
cord-001207-yjaiybwf	233	7	than	than	IN
cord-001207-yjaiybwf	233	8	1	1	CD
cord-001207-yjaiybwf	233	9	%	%	NN
cord-001207-yjaiybwf	233	10	in	in	IN
cord-001207-yjaiybwf	233	11	a	a	DT
cord-001207-yjaiybwf	233	12	distinct	distinct	JJ
cord-001207-yjaiybwf	233	13	faecal	faecal	JJ
cord-001207-yjaiybwf	233	14	virome	virome	NN
cord-001207-yjaiybwf	233	15	are	be	VBP
cord-001207-yjaiybwf	233	16	subsumed	subsume	VBN
cord-001207-yjaiybwf	233	17	to	to	IN
cord-001207-yjaiybwf	233	18	other	other	JJ
cord-001207-yjaiybwf	233	19	families	family	NNS
cord-001207-yjaiybwf	233	20	.	.	.
cord-001207-yjaiybwf	234	1	Families	family	NNS
cord-001207-yjaiybwf	234	2	which	which	WDT
cord-001207-yjaiybwf	234	3	were	be	VBD
cord-001207-yjaiybwf	234	4	not	not	RB
cord-001207-yjaiybwf	234	5	classified	classify	VBN
cord-001207-yjaiybwf	234	6	by	by	IN
cord-001207-yjaiybwf	234	7	the	the	DT
cord-001207-yjaiybwf	234	8	International	International	NNP
cord-001207-yjaiybwf	234	9	Committee	Committee	NNP
cord-001207-yjaiybwf	234	10	on	on	IN
cord-001207-yjaiybwf	234	11	Taxonomy	Taxonomy	NNP
cord-001207-yjaiybwf	234	12	of	of	IN
cord-001207-yjaiybwf	234	13	Viruses	Viruses	NNPS
cord-001207-yjaiybwf	234	14	(	(	-LRB-
cord-001207-yjaiybwf	234	15	ICTV	ICTV	NNP
cord-001207-yjaiybwf	234	16	)	)	-RRB-
cord-001207-yjaiybwf	234	17	are	be	VBP
cord-001207-yjaiybwf	234	18	subsumed	subsume	VBN
cord-001207-yjaiybwf	234	19	to	to	IN
cord-001207-yjaiybwf	234	20	not	not	RB
cord-001207-yjaiybwf	234	21	assigned	assign	VBN
cord-001207-yjaiybwf	234	22	.	.	.
cord-001207-yjaiybwf	235	1	The	the	DT
cord-001207-yjaiybwf	235	2	group	group	NN
cord-001207-yjaiybwf	235	3	P	p	NN
cord-001207-yjaiybwf	235	4	received	receive	VBD
cord-001207-yjaiybwf	235	5	the	the	DT
cord-001207-yjaiybwf	235	6	probiotic	probiotic	JJ
cord-001207-yjaiybwf	235	7	bacterium	bacterium	NN
cord-001207-yjaiybwf	235	8	E.	E.	NNP
cord-001207-yjaiybwf	235	9	faecium	faecium	NN
cord-001207-yjaiybwf	236	1	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	236	2	10415	10415	CD
cord-001207-yjaiybwf	236	3	(	(	-LRB-
cord-001207-yjaiybwf	236	4	P	p	NN
cord-001207-yjaiybwf	236	5	)	)	-RRB-
cord-001207-yjaiybwf	236	6	and	and	CC
cord-001207-yjaiybwf	236	7	the	the	DT
cord-001207-yjaiybwf	236	8	group	group	NN
cord-001207-yjaiybwf	236	9	C	C	NNP
cord-001207-yjaiybwf	236	10	(	(	-LRB-
cord-001207-yjaiybwf	236	11	C	C	NNP
cord-001207-yjaiybwf	236	12	)	)	-RRB-
cord-001207-yjaiybwf	236	13	received	receive	VBD
cord-001207-yjaiybwf	236	14	no	no	DT
cord-001207-yjaiybwf	236	15	probiotic	probiotic	NN
cord-001207-yjaiybwf	236	16	.	.	.
cord-001207-yjaiybwf	237	1	Table	table	NN
cord-001207-yjaiybwf	237	2	S2	s2	NN
cord-001207-yjaiybwf	237	3	Relative	relative	JJ
cord-001207-yjaiybwf	237	4	abundance	abundance	NN
cord-001207-yjaiybwf	237	5	of	of	IN
cord-001207-yjaiybwf	237	6	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	237	7	species	specie	NNS
cord-001207-yjaiybwf	237	8	among	among	IN
cord-001207-yjaiybwf	237	9	all	all	DT
cord-001207-yjaiybwf	237	10	bacteriophages	bacteriophage	NNS
cord-001207-yjaiybwf	237	11	detected	detect	VBN
cord-001207-yjaiybwf	237	12	in	in	IN
cord-001207-yjaiybwf	237	13	the	the	DT
cord-001207-yjaiybwf	237	14	analyzed	analyze	VBN
cord-001207-yjaiybwf	237	15	faecal	faecal	JJ
cord-001207-yjaiybwf	237	16	viromes	virome	NNS
cord-001207-yjaiybwf	237	17	.	.	.
cord-001207-yjaiybwf	238	1	The	the	DT
cord-001207-yjaiybwf	238	2	table	table	NN
cord-001207-yjaiybwf	238	3	shows	show	VBZ
cord-001207-yjaiybwf	238	4	the	the	DT
cord-001207-yjaiybwf	238	5	number	number	NN
cord-001207-yjaiybwf	238	6	of	of	IN
cord-001207-yjaiybwf	238	7	reads	read	NNS
cord-001207-yjaiybwf	238	8	with	with	IN
cord-001207-yjaiybwf	238	9	sequence	sequence	NN
cord-001207-yjaiybwf	238	10	identities	identity	NNS
cord-001207-yjaiybwf	238	11	to	to	IN
cord-001207-yjaiybwf	238	12	a	a	DT
cord-001207-yjaiybwf	238	13	certain	certain	JJ
cord-001207-yjaiybwf	238	14	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	238	15	species	specie	NNS
cord-001207-yjaiybwf	238	16	in	in	IN
cord-001207-yjaiybwf	238	17	relation	relation	NN
cord-001207-yjaiybwf	238	18	to	to	IN
cord-001207-yjaiybwf	238	19	all	all	DT
cord-001207-yjaiybwf	238	20	bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	238	21	reads	read	VBZ
cord-001207-yjaiybwf	238	22	(	(	-LRB-
cord-001207-yjaiybwf	238	23	in	in	IN
cord-001207-yjaiybwf	238	24	%	%	NN
cord-001207-yjaiybwf	238	25	)	)	-RRB-
cord-001207-yjaiybwf	238	26	.	.	.
cord-001207-yjaiybwf	239	1	Bacteriophage	bacteriophage	NN
cord-001207-yjaiybwf	239	2	species	specie	NNS
cord-001207-yjaiybwf	239	3	showing	show	VBG
cord-001207-yjaiybwf	239	4	an	an	DT
cord-001207-yjaiybwf	239	5	abundance	abundance	NN
cord-001207-yjaiybwf	239	6	of	of	IN
cord-001207-yjaiybwf	239	7	less	less	JJR
cord-001207-yjaiybwf	239	8	than	than	IN
cord-001207-yjaiybwf	239	9	1	1	CD
cord-001207-yjaiybwf	239	10	%	%	NN
cord-001207-yjaiybwf	239	11	in	in	IN
cord-001207-yjaiybwf	239	12	a	a	DT
cord-001207-yjaiybwf	239	13	distinct	distinct	JJ
cord-001207-yjaiybwf	239	14	faecal	faecal	JJ
cord-001207-yjaiybwf	239	15	virome	virome	NN
cord-001207-yjaiybwf	239	16	are	be	VBP
cord-001207-yjaiybwf	239	17	subsumed	subsume	VBN
cord-001207-yjaiybwf	239	18	(	(	-LRB-
cord-001207-yjaiybwf	239	19	,	,	,
cord-001207-yjaiybwf	239	20	1	1	CD
cord-001207-yjaiybwf	239	21	%	%	NN
cord-001207-yjaiybwf	239	22	)	)	-RRB-
cord-001207-yjaiybwf	239	23	.	.	.
cord-001207-yjaiybwf	240	1	The	the	DT
cord-001207-yjaiybwf	240	2	group	group	NN
cord-001207-yjaiybwf	240	3	P	p	NN
cord-001207-yjaiybwf	240	4	received	receive	VBD
cord-001207-yjaiybwf	240	5	the	the	DT
cord-001207-yjaiybwf	240	6	probiotic	probiotic	JJ
cord-001207-yjaiybwf	240	7	bacterium	bacterium	NN
cord-001207-yjaiybwf	240	8	E.	E.	NNP
cord-001207-yjaiybwf	240	9	faecium	faecium	NN
cord-001207-yjaiybwf	241	1	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	241	2	10415	10415	CD
cord-001207-yjaiybwf	241	3	(	(	-LRB-
cord-001207-yjaiybwf	241	4	P	p	NN
cord-001207-yjaiybwf	241	5	)	)	-RRB-
cord-001207-yjaiybwf	241	6	and	and	CC
cord-001207-yjaiybwf	241	7	the	the	DT
cord-001207-yjaiybwf	241	8	group	group	NN
cord-001207-yjaiybwf	241	9	C	C	NNP
cord-001207-yjaiybwf	241	10	(	(	-LRB-
cord-001207-yjaiybwf	241	11	C	C	NNP
cord-001207-yjaiybwf	241	12	)	)	-RRB-
cord-001207-yjaiybwf	241	13	received	receive	VBD
cord-001207-yjaiybwf	241	14	no	no	DT
cord-001207-yjaiybwf	241	15	probiotic	probiotic	NN
cord-001207-yjaiybwf	241	16	.	.	.
cord-001207-yjaiybwf	242	1	(	(	-LRB-
cord-001207-yjaiybwf	242	2	PDF	PDF	NNP
cord-001207-yjaiybwf	242	3	)	)	-RRB-
cord-001207-yjaiybwf	242	4	  	  	_SP
cord-001207-yjaiybwf	242	5	Table	table	NN
cord-001207-yjaiybwf	242	6	S3	S3	NNP
cord-001207-yjaiybwf	242	7	Relative	relative	JJ
cord-001207-yjaiybwf	242	8	abundance	abundance	NN
cord-001207-yjaiybwf	242	9	of	of	IN
cord-001207-yjaiybwf	242	10	mammalian	mammalian	JJ
cord-001207-yjaiybwf	242	11	virus	virus	NN
cord-001207-yjaiybwf	242	12	genera	genera	VBP
cord-001207-yjaiybwf	242	13	among	among	IN
cord-001207-yjaiybwf	242	14	all	all	DT
cord-001207-yjaiybwf	242	15	animal	animal	NN
cord-001207-yjaiybwf	242	16	viruses	virus	NNS
cord-001207-yjaiybwf	242	17	detected	detect	VBN
cord-001207-yjaiybwf	242	18	in	in	IN
cord-001207-yjaiybwf	242	19	the	the	DT
cord-001207-yjaiybwf	242	20	analyzed	analyze	VBN
cord-001207-yjaiybwf	242	21	faecal	faecal	JJ
cord-001207-yjaiybwf	242	22	viromes	virome	NNS
cord-001207-yjaiybwf	242	23	.	.	.
cord-001207-yjaiybwf	243	1	The	the	DT
cord-001207-yjaiybwf	243	2	table	table	NN
cord-001207-yjaiybwf	243	3	shows	show	VBZ
cord-001207-yjaiybwf	243	4	the	the	DT
cord-001207-yjaiybwf	243	5	number	number	NN
cord-001207-yjaiybwf	243	6	of	of	IN
cord-001207-yjaiybwf	243	7	reads	read	NNS
cord-001207-yjaiybwf	243	8	with	with	IN
cord-001207-yjaiybwf	243	9	sequence	sequence	NN
cord-001207-yjaiybwf	243	10	identities	identity	NNS
cord-001207-yjaiybwf	243	11	to	to	IN
cord-001207-yjaiybwf	243	12	a	a	DT
cord-001207-yjaiybwf	243	13	certain	certain	JJ
cord-001207-yjaiybwf	243	14	mammalian	mammalian	JJ
cord-001207-yjaiybwf	243	15	virus	virus	NN
cord-001207-yjaiybwf	243	16	genus	genus	NN
cord-001207-yjaiybwf	243	17	in	in	IN
cord-001207-yjaiybwf	243	18	relation	relation	NN
cord-001207-yjaiybwf	243	19	to	to	IN
cord-001207-yjaiybwf	243	20	all	all	DT
cord-001207-yjaiybwf	243	21	animal	animal	NN
cord-001207-yjaiybwf	243	22	virus	virus	NN
cord-001207-yjaiybwf	243	23	reads	read	VBZ
cord-001207-yjaiybwf	243	24	(	(	-LRB-
cord-001207-yjaiybwf	243	25	in	in	IN
cord-001207-yjaiybwf	243	26	%	%	NN
cord-001207-yjaiybwf	243	27	)	)	-RRB-
cord-001207-yjaiybwf	243	28	.	.	.
cord-001207-yjaiybwf	244	1	Mammalian	mammalian	JJ
cord-001207-yjaiybwf	244	2	viruses	virus	NNS
cord-001207-yjaiybwf	244	3	,	,	,
cord-001207-yjaiybwf	244	4	which	which	WDT
cord-001207-yjaiybwf	244	5	are	be	VBP
cord-001207-yjaiybwf	244	6	so	so	RB
cord-001207-yjaiybwf	244	7	far	far	RB
cord-001207-yjaiybwf	244	8	not	not	RB
cord-001207-yjaiybwf	244	9	assigned	assign	VBN
cord-001207-yjaiybwf	244	10	to	to	IN
cord-001207-yjaiybwf	244	11	a	a	DT
cord-001207-yjaiybwf	244	12	certain	certain	JJ
cord-001207-yjaiybwf	244	13	genus	genus	NN
cord-001207-yjaiybwf	244	14	,	,	,
cord-001207-yjaiybwf	244	15	are	be	VBP
cord-001207-yjaiybwf	244	16	indicated	indicate	VBN
cord-001207-yjaiybwf	244	17	in	in	IN
cord-001207-yjaiybwf	244	18	apostrophes	apostrophe	NNS
cord-001207-yjaiybwf	244	19	.	.	.
cord-001207-yjaiybwf	245	1	Mammalian	mammalian	JJ
cord-001207-yjaiybwf	245	2	virus	virus	NN
cord-001207-yjaiybwf	245	3	genera	genera	VBP
cord-001207-yjaiybwf	245	4	showing	show	VBG
cord-001207-yjaiybwf	245	5	an	an	DT
cord-001207-yjaiybwf	245	6	abundance	abundance	NN
cord-001207-yjaiybwf	245	7	of	of	IN
cord-001207-yjaiybwf	245	8	less	less	JJR
cord-001207-yjaiybwf	245	9	than	than	IN
cord-001207-yjaiybwf	245	10	1	1	CD
cord-001207-yjaiybwf	245	11	%	%	NN
cord-001207-yjaiybwf	245	12	in	in	IN
cord-001207-yjaiybwf	245	13	a	a	DT
cord-001207-yjaiybwf	245	14	distinct	distinct	JJ
cord-001207-yjaiybwf	245	15	faecal	faecal	JJ
cord-001207-yjaiybwf	245	16	virome	virome	NN
cord-001207-yjaiybwf	245	17	are	be	VBP
cord-001207-yjaiybwf	245	18	subsumed	subsume	VBN
cord-001207-yjaiybwf	245	19	(	(	-LRB-
cord-001207-yjaiybwf	245	20	genera	genus	NNS
cord-001207-yjaiybwf	245	21	,	,	,
cord-001207-yjaiybwf	245	22	1	1	CD
cord-001207-yjaiybwf	245	23	%	%	NN
cord-001207-yjaiybwf	245	24	)	)	-RRB-
cord-001207-yjaiybwf	245	25	.	.	.
cord-001207-yjaiybwf	246	1	Viruses	virus	NNS
cord-001207-yjaiybwf	246	2	from	from	IN
cord-001207-yjaiybwf	246	3	non	non	JJ
cord-001207-yjaiybwf	246	4	-	-	JJ
cord-001207-yjaiybwf	246	5	mammalian	mammalian	JJ
cord-001207-yjaiybwf	246	6	hosts	host	NNS
cord-001207-yjaiybwf	246	7	are	be	VBP
cord-001207-yjaiybwf	246	8	subsumed	subsume	VBN
cord-001207-yjaiybwf	246	9	to	to	IN
cord-001207-yjaiybwf	246	10	non	non	JJ
cord-001207-yjaiybwf	246	11	mammalian	mammalian	JJ
cord-001207-yjaiybwf	246	12	viruses	virus	NNS
cord-001207-yjaiybwf	246	13	.	.	.
cord-001207-yjaiybwf	247	1	The	the	DT
cord-001207-yjaiybwf	247	2	group	group	NN
cord-001207-yjaiybwf	247	3	P	p	NN
cord-001207-yjaiybwf	247	4	received	receive	VBD
cord-001207-yjaiybwf	247	5	the	the	DT
cord-001207-yjaiybwf	247	6	probiotic	probiotic	JJ
cord-001207-yjaiybwf	247	7	bacterium	bacterium	NN
cord-001207-yjaiybwf	247	8	E.	E.	NNP
cord-001207-yjaiybwf	247	9	faecium	faecium	NN
cord-001207-yjaiybwf	248	1	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	248	2	10415	10415	CD
cord-001207-yjaiybwf	248	3	(	(	-LRB-
cord-001207-yjaiybwf	248	4	P	p	NN
cord-001207-yjaiybwf	248	5	)	)	-RRB-
cord-001207-yjaiybwf	248	6	and	and	CC
cord-001207-yjaiybwf	248	7	the	the	DT
cord-001207-yjaiybwf	248	8	group	group	NN
cord-001207-yjaiybwf	248	9	C	C	NNP
cord-001207-yjaiybwf	248	10	(	(	-LRB-
cord-001207-yjaiybwf	248	11	C	C	NNP
cord-001207-yjaiybwf	248	12	)	)	-RRB-
cord-001207-yjaiybwf	248	13	received	receive	VBD
cord-001207-yjaiybwf	248	14	no	no	DT
cord-001207-yjaiybwf	248	15	probiotic	probiotic	NN
cord-001207-yjaiybwf	248	16	.	.	.
cord-001207-yjaiybwf	249	1	(	(	-LRB-
cord-001207-yjaiybwf	249	2	PDF	PDF	NNP
cord-001207-yjaiybwf	249	3	)	)	-RRB-
cord-001207-yjaiybwf	250	1	The	the	DT
cord-001207-yjaiybwf	250	2	human	human	JJ
cord-001207-yjaiybwf	250	3	gut	gut	NN
cord-001207-yjaiybwf	250	4	virome	virome	NNP
cord-001207-yjaiybwf	250	5	:	:	:
cord-001207-yjaiybwf	251	1	Inter	inter	JJ
cord-001207-yjaiybwf	251	2	-	-	JJ
cord-001207-yjaiybwf	251	3	individual	individual	JJ
cord-001207-yjaiybwf	251	4	variation	variation	NN
cord-001207-yjaiybwf	251	5	and	and	CC
cord-001207-yjaiybwf	251	6	dynamic	dynamic	JJ
cord-001207-yjaiybwf	251	7	response	response	NN
cord-001207-yjaiybwf	251	8	to	to	IN
cord-001207-yjaiybwf	251	9	diet	diet	NN
cord-001207-yjaiybwf	252	1	The	the	DT
cord-001207-yjaiybwf	252	2	fecal	fecal	JJ
cord-001207-yjaiybwf	252	3	virome	virome	NN
cord-001207-yjaiybwf	252	4	of	of	IN
cord-001207-yjaiybwf	252	5	pigs	pig	NNS
cord-001207-yjaiybwf	252	6	on	on	IN
cord-001207-yjaiybwf	252	7	a	a	DT
cord-001207-yjaiybwf	252	8	high	high	JJ
cord-001207-yjaiybwf	252	9	-	-	HYPH
cord-001207-yjaiybwf	252	10	density	density	NN
cord-001207-yjaiybwf	252	11	farm	farm	NN
cord-001207-yjaiybwf	252	12	Antibiotic	antibiotic	JJ
cord-001207-yjaiybwf	252	13	treatment	treatment	NN
cord-001207-yjaiybwf	252	14	expands	expand	VBZ
cord-001207-yjaiybwf	252	15	the	the	DT
cord-001207-yjaiybwf	252	16	resistance	resistance	NN
cord-001207-yjaiybwf	252	17	reservoir	reservoir	NN
cord-001207-yjaiybwf	252	18	and	and	CC
cord-001207-yjaiybwf	252	19	ecological	ecological	JJ
cord-001207-yjaiybwf	252	20	network	network	NN
cord-001207-yjaiybwf	252	21	of	of	IN
cord-001207-yjaiybwf	252	22	the	the	DT
cord-001207-yjaiybwf	252	23	phage	phage	NN
cord-001207-yjaiybwf	252	24	metagenome	metagenome	NNP
cord-001207-yjaiybwf	252	25	Genome	Genome	NNP
cord-001207-yjaiybwf	252	26	signature	signature	NN
cord-001207-yjaiybwf	252	27	-	-	HYPH
cord-001207-yjaiybwf	252	28	based	base	VBN
cord-001207-yjaiybwf	252	29	dissection	dissection	NN
cord-001207-yjaiybwf	252	30	of	of	IN
cord-001207-yjaiybwf	252	31	human	human	JJ
cord-001207-yjaiybwf	252	32	gut	gut	NN
cord-001207-yjaiybwf	252	33	metagenomes	metagenome	NNS
cord-001207-yjaiybwf	252	34	to	to	TO
cord-001207-yjaiybwf	252	35	extract	extract	VB
cord-001207-yjaiybwf	252	36	subliminal	subliminal	JJ
cord-001207-yjaiybwf	252	37	viral	viral	JJ
cord-001207-yjaiybwf	252	38	sequences	sequence	NNS
cord-001207-yjaiybwf	252	39	Analysis	Analysis	NNP
cord-001207-yjaiybwf	252	40	of	of	IN
cord-001207-yjaiybwf	252	41	a	a	DT
cord-001207-yjaiybwf	252	42	viral	viral	JJ
cord-001207-yjaiybwf	252	43	metagenomic	metagenomic	JJ
cord-001207-yjaiybwf	252	44	library	library	NN
cord-001207-yjaiybwf	252	45	from	from	IN
cord-001207-yjaiybwf	252	46	200	200	CD
cord-001207-yjaiybwf	252	47	m	m	CD
cord-001207-yjaiybwf	252	48	depth	depth	NN
cord-001207-yjaiybwf	252	49	in	in	IN
cord-001207-yjaiybwf	252	50	Monterey	Monterey	NNP
cord-001207-yjaiybwf	252	51	Bay	Bay	NNP
cord-001207-yjaiybwf	252	52	,	,	,
cord-001207-yjaiybwf	252	53	California	California	NNP
cord-001207-yjaiybwf	252	54	constructed	construct	VBN
cord-001207-yjaiybwf	252	55	by	by	IN
cord-001207-yjaiybwf	252	56	direct	direct	JJ
cord-001207-yjaiybwf	252	57	shotgun	shotgun	NN
cord-001207-yjaiybwf	252	58	cloning	clone	VBG
cord-001207-yjaiybwf	252	59	Prevention	prevention	NN
cord-001207-yjaiybwf	252	60	and	and	CC
cord-001207-yjaiybwf	252	61	treatment	treatment	NN
cord-001207-yjaiybwf	252	62	of	of	IN
cord-001207-yjaiybwf	252	63	enteric	enteric	JJ
cord-001207-yjaiybwf	252	64	viral	viral	JJ
cord-001207-yjaiybwf	252	65	infections	infection	NNS
cord-001207-yjaiybwf	252	66	:	:	:
cord-001207-yjaiybwf	252	67	possible	possible	JJ
cord-001207-yjaiybwf	252	68	benefits	benefit	NNS
cord-001207-yjaiybwf	252	69	of	of	IN
cord-001207-yjaiybwf	252	70	probiotic	probiotic	JJ
cord-001207-yjaiybwf	252	71	bacteria	bacteria	NNS
cord-001207-yjaiybwf	252	72	.	.	.
cord-001207-yjaiybwf	253	1	Microbes	microbe	NNS
cord-001207-yjaiybwf	253	2	Infect	infect	VBP
cord-001207-yjaiybwf	253	3	RNA	RNA	NNP
cord-001207-yjaiybwf	253	4	Viral	Viral	NNP
cord-001207-yjaiybwf	253	5	Community	Community	NNP
cord-001207-yjaiybwf	253	6	in	in	IN
cord-001207-yjaiybwf	253	7	Human	Human	NNP
cord-001207-yjaiybwf	253	8	Feces	fece	NNS
cord-001207-yjaiybwf	253	9	:	:	:
cord-001207-yjaiybwf	254	1	Prevalence	prevalence	NN
cord-001207-yjaiybwf	254	2	of	of	IN
cord-001207-yjaiybwf	254	3	Plant	Plant	NNP
cord-001207-yjaiybwf	254	4	Pathogenic	Pathogenic	NNP
cord-001207-yjaiybwf	254	5	Viruses	Viruses	NNPS
cord-001207-yjaiybwf	254	6	Metagenomic	Metagenomic	NNP
cord-001207-yjaiybwf	254	7	analyses	analysis	NNS
cord-001207-yjaiybwf	254	8	of	of	IN
cord-001207-yjaiybwf	254	9	an	an	DT
cord-001207-yjaiybwf	254	10	uncultured	uncultured	JJ
cord-001207-yjaiybwf	254	11	viral	viral	JJ
cord-001207-yjaiybwf	254	12	community	community	NN
cord-001207-yjaiybwf	254	13	from	from	IN
cord-001207-yjaiybwf	254	14	human	human	JJ
cord-001207-yjaiybwf	254	15	feces	fece	NNS
cord-001207-yjaiybwf	254	16	Viruses	virus	NNS
cord-001207-yjaiybwf	254	17	in	in	IN
cord-001207-yjaiybwf	254	18	the	the	DT
cord-001207-yjaiybwf	254	19	faecal	faecal	JJ
cord-001207-yjaiybwf	254	20	microbiota	microbiota	NN
cord-001207-yjaiybwf	254	21	of	of	IN
cord-001207-yjaiybwf	254	22	monozygotic	monozygotic	JJ
cord-001207-yjaiybwf	254	23	twins	twin	NNS
cord-001207-yjaiybwf	254	24	and	and	CC
cord-001207-yjaiybwf	254	25	their	-PRON-	PRP$
cord-001207-yjaiybwf	254	26	mothers	mother	NNS
cord-001207-yjaiybwf	254	27	Simultaneous	simultaneous	JJ
cord-001207-yjaiybwf	254	28	identification	identification	NN
cord-001207-yjaiybwf	254	29	of	of	IN
cord-001207-yjaiybwf	254	30	DNA	DNA	NNP
cord-001207-yjaiybwf	254	31	and	and	CC
cord-001207-yjaiybwf	254	32	RNA	RNA	NNP
cord-001207-yjaiybwf	254	33	viruses	virus	NNS
cord-001207-yjaiybwf	254	34	present	present	JJ
cord-001207-yjaiybwf	254	35	in	in	IN
cord-001207-yjaiybwf	254	36	pig	pig	NN
cord-001207-yjaiybwf	254	37	faeces	faece	NNS
cord-001207-yjaiybwf	254	38	using	use	VBG
cord-001207-yjaiybwf	254	39	process	process	NN
cord-001207-yjaiybwf	254	40	-	-	HYPH
cord-001207-yjaiybwf	254	41	controlled	control	VBN
cord-001207-yjaiybwf	254	42	deep	deep	JJ
cord-001207-yjaiybwf	254	43	sequencing	sequencing	NN
cord-001207-yjaiybwf	254	44	Diversity	diversity	NN
cord-001207-yjaiybwf	254	45	of	of	IN
cord-001207-yjaiybwf	254	46	viruses	virus	NNS
cord-001207-yjaiybwf	254	47	detected	detect	VBN
cord-001207-yjaiybwf	254	48	by	by	IN
cord-001207-yjaiybwf	254	49	deep	deep	JJ
cord-001207-yjaiybwf	254	50	sequencing	sequencing	NN
cord-001207-yjaiybwf	254	51	in	in	IN
cord-001207-yjaiybwf	254	52	pigs	pig	NNS
cord-001207-yjaiybwf	254	53	from	from	IN
cord-001207-yjaiybwf	254	54	a	a	DT
cord-001207-yjaiybwf	254	55	common	common	JJ
cord-001207-yjaiybwf	254	56	background	background	NN
cord-001207-yjaiybwf	254	57	Different	different	JJ
cord-001207-yjaiybwf	254	58	virulence	virulence	NN
cord-001207-yjaiybwf	254	59	of	of	IN
cord-001207-yjaiybwf	254	60	porcine	porcine	JJ
cord-001207-yjaiybwf	254	61	and	and	CC
cord-001207-yjaiybwf	254	62	porcine	porcine	JJ
cord-001207-yjaiybwf	254	63	-	-	HYPH
cord-001207-yjaiybwf	254	64	like	like	JJ
cord-001207-yjaiybwf	254	65	bovine	bovine	JJ
cord-001207-yjaiybwf	254	66	rotavirus	rotavirus	NN
cord-001207-yjaiybwf	254	67	strains	strain	NNS
cord-001207-yjaiybwf	254	68	with	with	IN
cord-001207-yjaiybwf	254	69	genetically	genetically	RB
cord-001207-yjaiybwf	254	70	nearly	nearly	RB
cord-001207-yjaiybwf	254	71	identical	identical	JJ
cord-001207-yjaiybwf	254	72	genomes	genome	NNS
cord-001207-yjaiybwf	254	73	in	in	IN
cord-001207-yjaiybwf	254	74	piglets	piglet	NNS
cord-001207-yjaiybwf	254	75	and	and	CC
cord-001207-yjaiybwf	254	76	calves	calf	NNS
cord-001207-yjaiybwf	254	77	Diversity	diversity	NN
cord-001207-yjaiybwf	254	78	and	and	CC
cord-001207-yjaiybwf	254	79	zoonotic	zoonotic	JJ
cord-001207-yjaiybwf	254	80	potential	potential	NN
cord-001207-yjaiybwf	254	81	of	of	IN
cord-001207-yjaiybwf	254	82	rotaviruses	rotavirus	NNS
cord-001207-yjaiybwf	254	83	in	in	IN
cord-001207-yjaiybwf	254	84	swine	swine	NN
cord-001207-yjaiybwf	254	85	and	and	CC
cord-001207-yjaiybwf	254	86	cattle	cattle	NNS
cord-001207-yjaiybwf	254	87	across	across	IN
cord-001207-yjaiybwf	254	88	Europe	Europe	NNP
cord-001207-yjaiybwf	254	89	Zoonotic	Zoonotic	NNP
cord-001207-yjaiybwf	254	90	aspects	aspect	NNS
cord-001207-yjaiybwf	254	91	of	of	IN
cord-001207-yjaiybwf	254	92	rotaviruses	rotaviruses	NNP
cord-001207-yjaiybwf	254	93	Occurrence	occurrence	NN
cord-001207-yjaiybwf	254	94	and	and	CC
cord-001207-yjaiybwf	254	95	investigation	investigation	NN
cord-001207-yjaiybwf	254	96	of	of	IN
cord-001207-yjaiybwf	254	97	enteric	enteric	JJ
cord-001207-yjaiybwf	254	98	viral	viral	JJ
cord-001207-yjaiybwf	254	99	infections	infection	NNS
cord-001207-yjaiybwf	254	100	in	in	IN
cord-001207-yjaiybwf	254	101	pigs	pig	NNS
cord-001207-yjaiybwf	254	102	with	with	IN
cord-001207-yjaiybwf	254	103	diarrhea	diarrhea	NN
cord-001207-yjaiybwf	254	104	in	in	IN
cord-001207-yjaiybwf	254	105	China	China	NNP
cord-001207-yjaiybwf	254	106	Molecular	Molecular	NNP
cord-001207-yjaiybwf	254	107	detection	detection	NN
cord-001207-yjaiybwf	254	108	of	of	IN
cord-001207-yjaiybwf	254	109	porcine	porcine	JJ
cord-001207-yjaiybwf	254	110	kobuviruses	kobuviruse	NNS
cord-001207-yjaiybwf	254	111	in	in	IN
cord-001207-yjaiybwf	254	112	Italian	italian	JJ
cord-001207-yjaiybwf	254	113	swine	swine	NN
cord-001207-yjaiybwf	254	114	Identification	identification	NN
cord-001207-yjaiybwf	254	115	and	and	CC
cord-001207-yjaiybwf	254	116	molecular	molecular	JJ
cord-001207-yjaiybwf	254	117	characterization	characterization	NN
cord-001207-yjaiybwf	254	118	of	of	IN
cord-001207-yjaiybwf	254	119	porcine	porcine	JJ
cord-001207-yjaiybwf	254	120	kobuvirus	kobuvirus	NN
cord-001207-yjaiybwf	254	121	in	in	IN
cord-001207-yjaiybwf	254	122	U.	U.	NNP
cord-001207-yjaiybwf	254	123	S.	S.	NNP
cord-001207-yjaiybwf	254	124	swine	swine	NN
cord-001207-yjaiybwf	254	125	.	.	.
cord-001207-yjaiybwf	255	1	Virus	virus	NN
cord-001207-yjaiybwf	255	2	Genes	gene	NNS
cord-001207-yjaiybwf	256	1	A	a	DT
cord-001207-yjaiybwf	256	2	divergent	divergent	JJ
cord-001207-yjaiybwf	256	3	clade	clade	NN
cord-001207-yjaiybwf	256	4	of	of	IN
cord-001207-yjaiybwf	256	5	circular	circular	JJ
cord-001207-yjaiybwf	256	6	single	single	RB
cord-001207-yjaiybwf	256	7	-	-	HYPH
cord-001207-yjaiybwf	256	8	stranded	strand	VBN
cord-001207-yjaiybwf	256	9	DNA	dna	NN
cord-001207-yjaiybwf	256	10	viruses	virus	NNS
cord-001207-yjaiybwf	256	11	from	from	IN
cord-001207-yjaiybwf	256	12	pig	pig	NN
cord-001207-yjaiybwf	256	13	feces	fece	NNS
cord-001207-yjaiybwf	257	1	Emerging	emerge	VBG
cord-001207-yjaiybwf	257	2	and	and	CC
cord-001207-yjaiybwf	257	3	Re	Re	NNS
cord-001207-yjaiybwf	257	4	-	-	JJ
cord-001207-yjaiybwf	257	5	emerging	emerge	VBG
cord-001207-yjaiybwf	257	6	Swine	swine	NN
cord-001207-yjaiybwf	257	7	Viruses	virus	NNS
cord-001207-yjaiybwf	257	8	Complete	complete	VBP
cord-001207-yjaiybwf	257	9	genome	genome	NN
cord-001207-yjaiybwf	257	10	analysis	analysis	NN
cord-001207-yjaiybwf	257	11	of	of	IN
cord-001207-yjaiybwf	257	12	porcine	porcine	JJ
cord-001207-yjaiybwf	257	13	enterovirus	enterovirus	NN
cord-001207-yjaiybwf	257	14	B	b	NN
cord-001207-yjaiybwf	257	15	isolated	isolate	VBN
cord-001207-yjaiybwf	257	16	in	in	IN
cord-001207-yjaiybwf	257	17	Korea	Korea	NNP
cord-001207-yjaiybwf	257	18	Characterization	Characterization	NNP
cord-001207-yjaiybwf	257	19	of	of	IN
cord-001207-yjaiybwf	257	20	a	a	DT
cord-001207-yjaiybwf	257	21	novel	novel	JJ
cord-001207-yjaiybwf	257	22	porcine	porcine	JJ
cord-001207-yjaiybwf	257	23	enterovirus	enterovirus	NN
cord-001207-yjaiybwf	257	24	in	in	IN
cord-001207-yjaiybwf	257	25	domestic	domestic	JJ
cord-001207-yjaiybwf	257	26	pig	pig	NN
cord-001207-yjaiybwf	257	27	in	in	IN
cord-001207-yjaiybwf	257	28	Hungary	Hungary	NNP
cord-001207-yjaiybwf	257	29	Astrovirus	Astrovirus	NNP
cord-001207-yjaiybwf	257	30	infections	infection	NNS
cord-001207-yjaiybwf	257	31	in	in	IN
cord-001207-yjaiybwf	257	32	humans	human	NNS
cord-001207-yjaiybwf	257	33	and	and	CC
cord-001207-yjaiybwf	257	34	animals	animal	NNS
cord-001207-yjaiybwf	258	1	-molecular	-molecular	JJ
cord-001207-yjaiybwf	258	2	biology	biology	NN
cord-001207-yjaiybwf	258	3	,	,	,
cord-001207-yjaiybwf	258	4	genetic	genetic	JJ
cord-001207-yjaiybwf	258	5	diversity	diversity	NN
cord-001207-yjaiybwf	258	6	,	,	,
cord-001207-yjaiybwf	258	7	and	and	CC
cord-001207-yjaiybwf	258	8	interspecies	interspecies	NN
cord-001207-yjaiybwf	258	9	transmissions	transmission	NNS
cord-001207-yjaiybwf	259	1	Rapid	rapid	JJ
cord-001207-yjaiybwf	259	2	evolution	evolution	NN
cord-001207-yjaiybwf	259	3	of	of	IN
cord-001207-yjaiybwf	259	4	the	the	DT
cord-001207-yjaiybwf	259	5	human	human	JJ
cord-001207-yjaiybwf	259	6	gut	gut	NN
cord-001207-yjaiybwf	259	7	virome	virome	NN
cord-001207-yjaiybwf	259	8	Viral	viral	JJ
cord-001207-yjaiybwf	259	9	diversity	diversity	NN
cord-001207-yjaiybwf	259	10	and	and	CC
cord-001207-yjaiybwf	259	11	dynamics	dynamic	NNS
cord-001207-yjaiybwf	259	12	in	in	IN
cord-001207-yjaiybwf	259	13	an	an	DT
cord-001207-yjaiybwf	259	14	infant	infant	NN
cord-001207-yjaiybwf	259	15	gut	gut	NN
cord-001207-yjaiybwf	259	16	Current	current	JJ
cord-001207-yjaiybwf	259	17	level	level	NN
cord-001207-yjaiybwf	259	18	of	of	IN
cord-001207-yjaiybwf	259	19	consensus	consensus	NN
cord-001207-yjaiybwf	259	20	on	on	IN
cord-001207-yjaiybwf	259	21	probiotic	probiotic	JJ
cord-001207-yjaiybwf	259	22	science	science	NN
cord-001207-yjaiybwf	259	23	-	-	HYPH
cord-001207-yjaiybwf	259	24	report	report	NN
cord-001207-yjaiybwf	259	25	of	of	IN
cord-001207-yjaiybwf	259	26	an	an	DT
cord-001207-yjaiybwf	259	27	expert	expert	JJ
cord-001207-yjaiybwf	259	28	meeting	meeting	NN
cord-001207-yjaiybwf	259	29	-	-	:
cord-001207-yjaiybwf	259	30	London	London	NNP
cord-001207-yjaiybwf	259	31	.	.	.
cord-001207-yjaiybwf	260	1	Gut	Gut	NNP
cord-001207-yjaiybwf	260	2	Microbes	Microbes	NNPS
cord-001207-yjaiybwf	260	3	Meta	Meta	NNP
cord-001207-yjaiybwf	260	4	-	-	HYPH
cord-001207-yjaiybwf	260	5	analysis	analysis	NN
cord-001207-yjaiybwf	260	6	:	:	:
cord-001207-yjaiybwf	260	7	the	the	DT
cord-001207-yjaiybwf	260	8	effects	effect	NNS
cord-001207-yjaiybwf	260	9	of	of	IN
cord-001207-yjaiybwf	260	10	Lactobacillus	lactobacillus	NN
cord-001207-yjaiybwf	260	11	rhamnosus	rhamnosus	NN
cord-001207-yjaiybwf	260	12	GG	GG	NNP
cord-001207-yjaiybwf	260	13	supplementation	supplementation	NN
cord-001207-yjaiybwf	260	14	for	for	IN
cord-001207-yjaiybwf	260	15	the	the	DT
cord-001207-yjaiybwf	260	16	prevention	prevention	NN
cord-001207-yjaiybwf	260	17	of	of	IN
cord-001207-yjaiybwf	260	18	healthcare	healthcare	NN
cord-001207-yjaiybwf	260	19	-	-	HYPH
cord-001207-yjaiybwf	260	20	associated	associate	VBN
cord-001207-yjaiybwf	260	21	diarrhoea	diarrhoea	NN
cord-001207-yjaiybwf	260	22	in	in	IN
cord-001207-yjaiybwf	260	23	children	child	NNS
cord-001207-yjaiybwf	260	24	Probiotics	probiotic	NNS
cord-001207-yjaiybwf	260	25	for	for	IN
cord-001207-yjaiybwf	260	26	prevention	prevention	NN
cord-001207-yjaiybwf	260	27	and	and	CC
cord-001207-yjaiybwf	260	28	treatment	treatment	NN
cord-001207-yjaiybwf	260	29	of	of	IN
cord-001207-yjaiybwf	260	30	diarrhea	diarrhea	NN
cord-001207-yjaiybwf	261	1	The	the	DT
cord-001207-yjaiybwf	261	2	comparition	comparition	NN
cord-001207-yjaiybwf	261	3	of	of	IN
cord-001207-yjaiybwf	261	4	the	the	DT
cord-001207-yjaiybwf	261	5	efficacy	efficacy	NN
cord-001207-yjaiybwf	261	6	of	of	IN
cord-001207-yjaiybwf	261	7	two	two	CD
cord-001207-yjaiybwf	261	8	different	different	JJ
cord-001207-yjaiybwf	261	9	probiotics	probiotic	NNS
cord-001207-yjaiybwf	261	10	in	in	IN
cord-001207-yjaiybwf	261	11	rotavirus	rotavirus	JJ
cord-001207-yjaiybwf	261	12	gastroenteritis	gastroenteritis	NN
cord-001207-yjaiybwf	261	13	in	in	IN
cord-001207-yjaiybwf	261	14	children	child	NNS
cord-001207-yjaiybwf	261	15	Dose	dose	NN
cord-001207-yjaiybwf	261	16	-	-	HYPH
cord-001207-yjaiybwf	261	17	dependent	dependent	JJ
cord-001207-yjaiybwf	261	18	effect	effect	NN
cord-001207-yjaiybwf	261	19	of	of	IN
cord-001207-yjaiybwf	261	20	Lactobacillus	lactobacillus	NN
cord-001207-yjaiybwf	261	21	rhamnosus	rhamnosus	NN
cord-001207-yjaiybwf	261	22	on	on	IN
cord-001207-yjaiybwf	261	23	quantitative	quantitative	JJ
cord-001207-yjaiybwf	261	24	reduction	reduction	NN
cord-001207-yjaiybwf	261	25	of	of	IN
cord-001207-yjaiybwf	261	26	faecal	faecal	JJ
cord-001207-yjaiybwf	261	27	rotavirus	rotavirus	NN
cord-001207-yjaiybwf	261	28	shedding	shed	VBG
cord-001207-yjaiybwf	261	29	in	in	IN
cord-001207-yjaiybwf	261	30	children	child	NNS
cord-001207-yjaiybwf	261	31	Feeding	feed	VBG
cord-001207-yjaiybwf	261	32	of	of	IN
cord-001207-yjaiybwf	261	33	the	the	DT
cord-001207-yjaiybwf	261	34	probiotic	probiotic	JJ
cord-001207-yjaiybwf	261	35	bacterium	bacterium	NN
cord-001207-yjaiybwf	261	36	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	261	37	faecium	faecium	NN
cord-001207-yjaiybwf	261	38	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	261	39	10415	10415	CD
cord-001207-yjaiybwf	261	40	differentially	differentially	RB
cord-001207-yjaiybwf	261	41	affects	affect	VBZ
cord-001207-yjaiybwf	261	42	shedding	shedding	NN
cord-001207-yjaiybwf	261	43	of	of	IN
cord-001207-yjaiybwf	261	44	enteric	enteric	JJ
cord-001207-yjaiybwf	261	45	viruses	virus	NNS
cord-001207-yjaiybwf	261	46	in	in	IN
cord-001207-yjaiybwf	261	47	pigs	pig	NNS
cord-001207-yjaiybwf	262	1	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	262	2	faecium	faecium	NN
cord-001207-yjaiybwf	263	1	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	264	1	10415	10415	CD
cord-001207-yjaiybwf	264	2	supplementation	supplementation	NN
cord-001207-yjaiybwf	264	3	affects	affect	VBZ
cord-001207-yjaiybwf	264	4	intestinal	intestinal	JJ
cord-001207-yjaiybwf	264	5	immuneassociated	immuneassociate	VBN
cord-001207-yjaiybwf	264	6	gene	gene	NN
cord-001207-yjaiybwf	264	7	expression	expression	NN
cord-001207-yjaiybwf	264	8	in	in	IN
cord-001207-yjaiybwf	264	9	post	post	JJ
cord-001207-yjaiybwf	264	10	-	-	JJ
cord-001207-yjaiybwf	264	11	weaning	weaning	JJ
cord-001207-yjaiybwf	264	12	piglets	piglet	NNS
cord-001207-yjaiybwf	264	13	.	.	.
cord-001207-yjaiybwf	265	1	Manuscript	Manuscript	NNP
cord-001207-yjaiybwf	265	2	Number	number	NN
cord-001207-yjaiybwf	265	3	:	:	:
cord-001207-yjaiybwf	265	4	accepted	accept	VBN
cord-001207-yjaiybwf	265	5	but	but	CC
cord-001207-yjaiybwf	265	6	unpublished	unpublished	JJ
cord-001207-yjaiybwf	265	7	so	so	RB
cord-001207-yjaiybwf	265	8	far	far	RB
cord-001207-yjaiybwf	265	9	Impact	Impact	NNP
cord-001207-yjaiybwf	265	10	of	of	IN
cord-001207-yjaiybwf	265	11	the	the	DT
cord-001207-yjaiybwf	265	12	probiotic	probiotic	JJ
cord-001207-yjaiybwf	265	13	bacteria	bacteria	NNS
cord-001207-yjaiybwf	265	14	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	265	15	faecium	faecium	NN
cord-001207-yjaiybwf	266	1	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	266	2	10415	10415	CD
cord-001207-yjaiybwf	267	1	(	(	-LRB-
cord-001207-yjaiybwf	267	2	SF68	SF68	NNP
cord-001207-yjaiybwf	267	3	)	)	-RRB-
cord-001207-yjaiybwf	267	4	and	and	CC
cord-001207-yjaiybwf	267	5	Bacillus	Bacillus	NNP
cord-001207-yjaiybwf	267	6	cereus	cereus	NN
cord-001207-yjaiybwf	267	7	var	var	NN
cord-001207-yjaiybwf	267	8	.	.	.
cord-001207-yjaiybwf	267	9	toyoi	toyoi	NNP
cord-001207-yjaiybwf	268	1	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	268	2	40112	40112	CD
cord-001207-yjaiybwf	268	3	on	on	IN
cord-001207-yjaiybwf	268	4	the	the	DT
cord-001207-yjaiybwf	268	5	development	development	NN
cord-001207-yjaiybwf	268	6	of	of	IN
cord-001207-yjaiybwf	268	7	serum	serum	NN
cord-001207-yjaiybwf	268	8	IgG	IgG	NNP
cord-001207-yjaiybwf	268	9	and	and	CC
cord-001207-yjaiybwf	268	10	faecal	faecal	JJ
cord-001207-yjaiybwf	268	11	IgA	IgA	NNP
cord-001207-yjaiybwf	268	12	of	of	IN
cord-001207-yjaiybwf	268	13	sows	sow	NNS
cord-001207-yjaiybwf	268	14	and	and	CC
cord-001207-yjaiybwf	268	15	their	-PRON-	PRP$
cord-001207-yjaiybwf	268	16	piglets	piglet	NNS
cord-001207-yjaiybwf	268	17	Influence	influence	NN
cord-001207-yjaiybwf	268	18	of	of	IN
cord-001207-yjaiybwf	268	19	a	a	DT
cord-001207-yjaiybwf	268	20	probiotic	probiotic	JJ
cord-001207-yjaiybwf	268	21	Enterococcus	enterococcus	NN
cord-001207-yjaiybwf	268	22	faecium	faecium	NN
cord-001207-yjaiybwf	269	1	strain	strain	VB
cord-001207-yjaiybwf	269	2	on	on	IN
cord-001207-yjaiybwf	269	3	development	development	NN
cord-001207-yjaiybwf	269	4	of	of	IN
cord-001207-yjaiybwf	269	5	the	the	DT
cord-001207-yjaiybwf	269	6	immune	immune	JJ
cord-001207-yjaiybwf	269	7	system	system	NN
cord-001207-yjaiybwf	269	8	of	of	IN
cord-001207-yjaiybwf	269	9	sows	sow	NNS
cord-001207-yjaiybwf	269	10	and	and	CC
cord-001207-yjaiybwf	269	11	piglets	piglet	NNS
cord-001207-yjaiybwf	269	12	Modulatory	modulatory	JJ
cord-001207-yjaiybwf	269	13	effects	effect	NNS
cord-001207-yjaiybwf	269	14	of	of	IN
cord-001207-yjaiybwf	269	15	Lactobacillus	lactobacillus	NN
cord-001207-yjaiybwf	269	16	salivarius	salivarius	NN
cord-001207-yjaiybwf	269	17	on	on	IN
cord-001207-yjaiybwf	269	18	intestinal	intestinal	JJ
cord-001207-yjaiybwf	269	19	mucosal	mucosal	JJ
cord-001207-yjaiybwf	269	20	immunity	immunity	NN
cord-001207-yjaiybwf	269	21	of	of	IN
cord-001207-yjaiybwf	269	22	piglets	piglet	NNS
cord-001207-yjaiybwf	270	1	Antiviral	antiviral	JJ
cord-001207-yjaiybwf	270	2	effects	effect	NNS
cord-001207-yjaiybwf	270	3	of	of	IN
cord-001207-yjaiybwf	270	4	a	a	DT
cord-001207-yjaiybwf	270	5	probiotic	probiotic	JJ
cord-001207-yjaiybwf	270	6	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	270	7	faecium	faecium	NN
cord-001207-yjaiybwf	270	8	strain	strain	NN
cord-001207-yjaiybwf	270	9	against	against	IN
cord-001207-yjaiybwf	270	10	transmissible	transmissible	JJ
cord-001207-yjaiybwf	270	11	gastroenteritis	gastroenteritis	NN
cord-001207-yjaiybwf	270	12	coronavirus	coronavirus	NN
cord-001207-yjaiybwf	270	13	Influence	influence	NN
cord-001207-yjaiybwf	270	14	of	of	IN
cord-001207-yjaiybwf	270	15	age	age	NN
cord-001207-yjaiybwf	270	16	and	and	CC
cord-001207-yjaiybwf	270	17	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	270	18	faecium	faecium	NN
cord-001207-yjaiybwf	271	1	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	271	2	10415	10415	CD
cord-001207-yjaiybwf	271	3	on	on	IN
cord-001207-yjaiybwf	271	4	development	development	NN
cord-001207-yjaiybwf	271	5	of	of	IN
cord-001207-yjaiybwf	271	6	small	small	JJ
cord-001207-yjaiybwf	271	7	intestinal	intestinal	JJ
cord-001207-yjaiybwf	271	8	digestive	digestive	JJ
cord-001207-yjaiybwf	271	9	physiology	physiology	NN
cord-001207-yjaiybwf	271	10	in	in	IN
cord-001207-yjaiybwf	271	11	piglets	piglet	NNS
cord-001207-yjaiybwf	272	1	Individual	individual	JJ
cord-001207-yjaiybwf	272	2	response	response	NN
cord-001207-yjaiybwf	272	3	of	of	IN
cord-001207-yjaiybwf	272	4	mother	mother	NN
cord-001207-yjaiybwf	272	5	sows	sow	VBZ
cord-001207-yjaiybwf	272	6	to	to	IN
cord-001207-yjaiybwf	272	7	a	a	DT
cord-001207-yjaiybwf	272	8	probiotic	probiotic	JJ
cord-001207-yjaiybwf	272	9	E.	E.	NNP
cord-001207-yjaiybwf	272	10	faecium	faecium	NN
cord-001207-yjaiybwf	272	11	strain	strain	NN
cord-001207-yjaiybwf	272	12	lead	lead	NN
cord-001207-yjaiybwf	272	13	to	to	IN
cord-001207-yjaiybwf	272	14	different	different	JJ
cord-001207-yjaiybwf	272	15	microbiota	microbiota	NN
cord-001207-yjaiybwf	272	16	composition	composition	NN
cord-001207-yjaiybwf	272	17	in	in	IN
cord-001207-yjaiybwf	272	18	their	-PRON-	PRP$
cord-001207-yjaiybwf	272	19	offspring	offspring	NN
cord-001207-yjaiybwf	273	1	accepted	accept	VBN
cord-001207-yjaiybwf	273	2	but	but	CC
cord-001207-yjaiybwf	273	3	unpublished	unpublished	JJ
cord-001207-yjaiybwf	273	4	so	so	RB
cord-001207-yjaiybwf	273	5	far	far	JJ
cord-001207-yjaiybwf	273	6	Effect	effect	NN
cord-001207-yjaiybwf	273	7	of	of	IN
cord-001207-yjaiybwf	273	8	the	the	DT
cord-001207-yjaiybwf	273	9	probiotic	probiotic	JJ
cord-001207-yjaiybwf	273	10	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	273	11	faecium	faecium	VBP
cord-001207-yjaiybwf	273	12	NCIMB10415	ncimb10415	NN
cord-001207-yjaiybwf	273	13	on	on	IN
cord-001207-yjaiybwf	273	14	cell	cell	NN
cord-001207-yjaiybwf	273	15	numbers	number	NNS
cord-001207-yjaiybwf	273	16	of	of	IN
cord-001207-yjaiybwf	273	17	total	total	JJ
cord-001207-yjaiybwf	273	18	Enterococcus	Enterococcus	NNP
cord-001207-yjaiybwf	273	19	spp	spp	NNS
cord-001207-yjaiybwf	273	20	.	.	.
cord-001207-yjaiybwf	274	1	,	,	,
cord-001207-yjaiybwf	274	2	E.	E.	NNP
cord-001207-yjaiybwf	274	3	faecium	faecium	NNP
cord-001207-yjaiybwf	274	4	and	and	CC
cord-001207-yjaiybwf	274	5	E.	E.	NNP
cord-001207-yjaiybwf	274	6	faecalis	faecalis	NNP
cord-001207-yjaiybwf	274	7	in	in	IN
cord-001207-yjaiybwf	274	8	the	the	DT
cord-001207-yjaiybwf	274	9	intestine	intestine	NN
cord-001207-yjaiybwf	274	10	of	of	IN
cord-001207-yjaiybwf	274	11	piglets	piglet	NNS
cord-001207-yjaiybwf	275	1	Laboratory	laboratory	NN
cord-001207-yjaiybwf	275	2	procedures	procedure	NNS
cord-001207-yjaiybwf	275	3	to	to	TO
cord-001207-yjaiybwf	275	4	generate	generate	VB
cord-001207-yjaiybwf	275	5	viral	viral	JJ
cord-001207-yjaiybwf	275	6	metagenomes	metagenomes	NNP
cord-001207-yjaiybwf	275	7	Assembly	assembly	NN
cord-001207-yjaiybwf	275	8	algorithms	algorithm	NNS
cord-001207-yjaiybwf	275	9	for	for	IN
cord-001207-yjaiybwf	275	10	next	next	JJ
cord-001207-yjaiybwf	275	11	-	-	HYPH
cord-001207-yjaiybwf	275	12	generation	generation	NN
cord-001207-yjaiybwf	275	13	sequencing	sequencing	NN
cord-001207-yjaiybwf	275	14	data	datum	NNS
cord-001207-yjaiybwf	275	15	Basic	Basic	NNP
cord-001207-yjaiybwf	275	16	Local	Local	NNP
cord-001207-yjaiybwf	275	17	Alignment	Alignment	NNP
cord-001207-yjaiybwf	275	18	Search	Search	NNP
cord-001207-yjaiybwf	275	19	Tool	Tool	NNP
cord-001207-yjaiybwf	275	20	Langmead	Langmead	NNP
cord-001207-yjaiybwf	275	21	B	B	NNP
cord-001207-yjaiybwf	275	22	,	,	,
cord-001207-yjaiybwf	275	23	Salzberg	Salzberg	NNP
cord-001207-yjaiybwf	275	24	SL	SL	NNP
cord-001207-yjaiybwf	275	25	(	(	-LRB-
cord-001207-yjaiybwf	275	26	2012	2012	CD
cord-001207-yjaiybwf	275	27	)	)	-RRB-
cord-001207-yjaiybwf	276	1	Fast	fast	JJ
cord-001207-yjaiybwf	276	2	gapped	gap	VBN
cord-001207-yjaiybwf	276	3	-	-	HYPH
cord-001207-yjaiybwf	276	4	read	read	VBN
cord-001207-yjaiybwf	276	5	alignment	alignment	NN
cord-001207-yjaiybwf	276	6	with	with	IN
cord-001207-yjaiybwf	276	7	Bowtie	Bowtie	NNP
cord-001207-yjaiybwf	276	8	2	2	CD
cord-001207-yjaiybwf	277	1	A	a	DT
cord-001207-yjaiybwf	277	2	mathematical	mathematical	JJ
cord-001207-yjaiybwf	277	3	theory	theory	NN
cord-001207-yjaiybwf	277	4	of	of	IN
cord-001207-yjaiybwf	277	5	communication	communication	NN
cord-001207-yjaiybwf	277	6	An	an	DT
cord-001207-yjaiybwf	277	7	Ordination	Ordination	NNP
cord-001207-yjaiybwf	277	8	of	of	IN
cord-001207-yjaiybwf	277	9	the	the	DT
cord-001207-yjaiybwf	277	10	Upland	Upland	NNP
cord-001207-yjaiybwf	277	11	Forest	Forest	NNP
cord-001207-yjaiybwf	277	12	Communities	Communities	NNPS
cord-001207-yjaiybwf	277	13	of	of	IN
cord-001207-yjaiybwf	277	14	Southern	Southern	NNP
cord-001207-yjaiybwf	277	15	Wisconsin	Wisconsin	NNP
cord-001207-yjaiybwf	277	16	Metagenomic	Metagenomic	NNP
cord-001207-yjaiybwf	277	17	study	study	NN
cord-001207-yjaiybwf	277	18	of	of	IN
cord-001207-yjaiybwf	277	19	the	the	DT
cord-001207-yjaiybwf	277	20	viruses	virus	NNS
cord-001207-yjaiybwf	277	21	of	of	IN
cord-001207-yjaiybwf	277	22	African	african	JJ
cord-001207-yjaiybwf	277	23	straw	straw	NN
cord-001207-yjaiybwf	277	24	-	-	HYPH
cord-001207-yjaiybwf	277	25	coloured	colour	VBN
cord-001207-yjaiybwf	277	26	fruit	fruit	NN
cord-001207-yjaiybwf	277	27	bats	bat	NNS
cord-001207-yjaiybwf	277	28	:	:	:
cord-001207-yjaiybwf	277	29	detection	detection	NN
cord-001207-yjaiybwf	277	30	of	of	IN
cord-001207-yjaiybwf	277	31	a	a	DT
cord-001207-yjaiybwf	277	32	chiropteran	chiropteran	JJ
cord-001207-yjaiybwf	277	33	poxvirus	poxvirus	NNP
cord-001207-yjaiybwf	277	34	and	and	CC
cord-001207-yjaiybwf	277	35	isolation	isolation	NN
cord-001207-yjaiybwf	277	36	of	of	IN
cord-001207-yjaiybwf	277	37	a	a	DT
cord-001207-yjaiybwf	277	38	novel	novel	JJ
cord-001207-yjaiybwf	277	39	adenovirus	adenovirus	NN
cord-001207-yjaiybwf	277	40	Candidate	candidate	NN
cord-001207-yjaiybwf	277	41	new	new	JJ
cord-001207-yjaiybwf	277	42	species	specie	NNS
cord-001207-yjaiybwf	277	43	of	of	IN
cord-001207-yjaiybwf	277	44	Kobuvirus	Kobuvirus	NNP
cord-001207-yjaiybwf	277	45	in	in	IN
cord-001207-yjaiybwf	277	46	porcine	porcine	JJ
cord-001207-yjaiybwf	277	47	hosts	host	NNS
cord-001207-yjaiybwf	277	48	Characterization	characterization	NN
cord-001207-yjaiybwf	277	49	of	of	IN
cord-001207-yjaiybwf	277	50	1706	1706	CD
cord-001207-yjaiybwf	277	51	,	,	,
cord-001207-yjaiybwf	277	52	a	a	DT
cord-001207-yjaiybwf	277	53	virulent	virulent	JJ
cord-001207-yjaiybwf	277	54	phage	phage	NN
cord-001207-yjaiybwf	277	55	from	from	IN
cord-001207-yjaiybwf	277	56	Lactococcus	Lactococcus	NNP
cord-001207-yjaiybwf	277	57	lactis	lactis	NN
cord-001207-yjaiybwf	277	58	with	with	IN
cord-001207-yjaiybwf	277	59	similarities	similarity	NNS
cord-001207-yjaiybwf	277	60	to	to	IN
cord-001207-yjaiybwf	277	61	prophages	prophage	NNS
cord-001207-yjaiybwf	277	62	from	from	IN
cord-001207-yjaiybwf	277	63	other	other	JJ
cord-001207-yjaiybwf	277	64	Firmicutes	Firmicutes	NNPS
cord-001207-yjaiybwf	277	65	Diverse	diverse	JJ
cord-001207-yjaiybwf	278	1	circular	circular	JJ
cord-001207-yjaiybwf	278	2	ssDNA	ssdna	JJ
cord-001207-yjaiybwf	278	3	viruses	virus	NNS
cord-001207-yjaiybwf	278	4	discovered	discover	VBN
cord-001207-yjaiybwf	278	5	in	in	IN
cord-001207-yjaiybwf	278	6	dragonflies	dragonfly	NNS
cord-001207-yjaiybwf	278	7	(	(	-LRB-
cord-001207-yjaiybwf	278	8	Odonata	Odonata	NNS
cord-001207-yjaiybwf	278	9	:	:	:
cord-001207-yjaiybwf	278	10	Epiprocta	Epiprocta	NNP
cord-001207-yjaiybwf	278	11	)	)	-RRB-
cord-001207-yjaiybwf	279	1	We	-PRON-	PRP
cord-001207-yjaiybwf	279	2	thank	thank	VBP
cord-001207-yjaiybwf	279	3	Robert	Robert	NNP
cord-001207-yjaiybwf	279	4	Pieper	Pieper	NNP
cord-001207-yjaiybwf	279	5	and	and	CC
cord-001207-yjaiybwf	279	6	his	-PRON-	PRP$
cord-001207-yjaiybwf	279	7	colleagues	colleague	NNS
cord-001207-yjaiybwf	279	8	at	at	IN
cord-001207-yjaiybwf	279	9	the	the	DT
cord-001207-yjaiybwf	279	10	Institute	Institute	NNP
cord-001207-yjaiybwf	279	11	for	for	IN
cord-001207-yjaiybwf	279	12	Animal	Animal	NNP
cord-001207-yjaiybwf	279	13	Nutrition	Nutrition	NNP
cord-001207-yjaiybwf	279	14	(	(	-LRB-
cord-001207-yjaiybwf	279	15	Free	Free	NNP
cord-001207-yjaiybwf	279	16	University	University	NNP
cord-001207-yjaiybwf	279	17	Berlin	Berlin	NNP
cord-001207-yjaiybwf	279	18	,	,	,
cord-001207-yjaiybwf	279	19	Germany	Germany	NNP
cord-001207-yjaiybwf	279	20	)	)	-RRB-
cord-001207-yjaiybwf	279	21	for	for	IN
cord-001207-yjaiybwf	279	22	the	the	DT
cord-001207-yjaiybwf	279	23	coordination	coordination	NN
cord-001207-yjaiybwf	279	24	of	of	IN
cord-001207-yjaiybwf	279	25	the	the	DT
cord-001207-yjaiybwf	279	26	animal	animal	NN
cord-001207-yjaiybwf	279	27	experiment	experiment	NN
cord-001207-yjaiybwf	279	28	and	and	CC
cord-001207-yjaiybwf	279	29	Paul	Paul	NNP
cord-001207-yjaiybwf	279	30	Wrede	Wrede	NNP
cord-001207-yjaiybwf	279	31	(	(	-LRB-
cord-001207-yjaiybwf	279	32	Charité	Charité	NNP
cord-001207-yjaiybwf	279	33	,	,	,
cord-001207-yjaiybwf	279	34	Berlin	Berlin	NNP
cord-001207-yjaiybwf	279	35	,	,	,
cord-001207-yjaiybwf	279	36	Germany	Germany	NNP
cord-001207-yjaiybwf	279	37	)	)	-RRB-
cord-001207-yjaiybwf	279	38	for	for	IN
cord-001207-yjaiybwf	279	39	helpful	helpful	JJ
cord-001207-yjaiybwf	279	40	discussion	discussion	NN
cord-001207-yjaiybwf	279	41	.	.	.
cord-001207-yjaiybwf	280	1	We	-PRON-	PRP
cord-001207-yjaiybwf	280	2	also	also	RB
cord-001207-yjaiybwf	280	3	thank	thank	VBP
cord-001207-yjaiybwf	280	4	Wilfried	Wilfried	NNP
cord-001207-yjaiybwf	280	5	Vahjen	Vahjen	NNP
cord-001207-yjaiybwf	280	6	and	and	CC
cord-001207-yjaiybwf	280	7	Ingo	Ingo	NNP
cord-001207-yjaiybwf	280	8	Starke	Starke	NNP
cord-001207-yjaiybwf	280	9	(	(	-LRB-
cord-001207-yjaiybwf	280	10	Institute	Institute	NNP
cord-001207-yjaiybwf	280	11	for	for	IN
cord-001207-yjaiybwf	280	12	Animal	Animal	NNP
cord-001207-yjaiybwf	280	13	Nutrition	Nutrition	NNP
cord-001207-yjaiybwf	280	14	,	,	,
cord-001207-yjaiybwf	280	15	Free	Free	NNP
cord-001207-yjaiybwf	280	16	University	University	NNP
cord-001207-yjaiybwf	280	17	Berlin	Berlin	NNP
cord-001207-yjaiybwf	280	18	,	,	,
cord-001207-yjaiybwf	280	19	Germany	Germany	NNP
cord-001207-yjaiybwf	280	20	)	)	-RRB-
cord-001207-yjaiybwf	280	21	for	for	IN
cord-001207-yjaiybwf	280	22	their	-PRON-	PRP$
cord-001207-yjaiybwf	280	23	support	support	NN
cord-001207-yjaiybwf	280	24	in	in	IN
cord-001207-yjaiybwf	280	25	detection	detection	NN
cord-001207-yjaiybwf	280	26	of	of	IN
cord-001207-yjaiybwf	280	27	E.	E.	NNP
cord-001207-yjaiybwf	280	28	faecium	faecium	NN
cord-001207-yjaiybwf	280	29	NCIMB	NCIMB	NNP
cord-001207-yjaiybwf	280	30	10415	10415	CD
cord-001207-yjaiybwf	280	31	in	in	IN
cord-001207-yjaiybwf	280	32	the	the	DT
cord-001207-yjaiybwf	280	33	samples	sample	NNS
cord-001207-yjaiybwf	280	34	.	.	.
cord-001207-yjaiybwf	280	35	 	 	_SP