id sid tid token lemma pos cord-000238-om92cx5q 1 1 key key JJ cord-000238-om92cx5q 2 1 : : : cord-000238-om92cx5q 2 2 cord-000238-om92cx5q cord-000238-om92cx5q JJ cord-000238-om92cx5q 2 3 authors author NNS cord-000238-om92cx5q 2 4 : : : cord-000238-om92cx5q 2 5 Ogbunugafor Ogbunugafor NNP cord-000238-om92cx5q 2 6 , , , cord-000238-om92cx5q 2 7 C. C. NNP cord-000238-om92cx5q 2 8 Brandon Brandon NNP cord-000238-om92cx5q 2 9 ; ; : cord-000238-om92cx5q 2 10 Pease Pease NNP cord-000238-om92cx5q 2 11 , , , cord-000238-om92cx5q 2 12 James James NNP cord-000238-om92cx5q 2 13 B. B. NNP cord-000238-om92cx5q 2 14 ; ; : cord-000238-om92cx5q 2 15 Turner Turner NNP cord-000238-om92cx5q 2 16 , , , cord-000238-om92cx5q 2 17 Paul Paul NNP cord-000238-om92cx5q 2 18 E. E. NNP cord-000238-om92cx5q 2 19 title title NN cord-000238-om92cx5q 2 20 : : : cord-000238-om92cx5q 3 1 On on IN cord-000238-om92cx5q 3 2 the the DT cord-000238-om92cx5q 3 3 possible possible JJ cord-000238-om92cx5q 3 4 role role NN cord-000238-om92cx5q 3 5 of of IN cord-000238-om92cx5q 3 6 robustness robustness NN cord-000238-om92cx5q 3 7 in in IN cord-000238-om92cx5q 3 8 the the DT cord-000238-om92cx5q 3 9 evolution evolution NN cord-000238-om92cx5q 3 10 of of IN cord-000238-om92cx5q 3 11 infectious infectious JJ cord-000238-om92cx5q 3 12 diseases disease NNS cord-000238-om92cx5q 3 13 date date NN cord-000238-om92cx5q 3 14 : : : cord-000238-om92cx5q 3 15 2010 2010 CD cord-000238-om92cx5q 3 16 - - SYM cord-000238-om92cx5q 3 17 06 06 CD cord-000238-om92cx5q 3 18 - - SYM cord-000238-om92cx5q 3 19 30 30 CD cord-000238-om92cx5q 3 20 journal journal NN cord-000238-om92cx5q 3 21 : : : cord-000238-om92cx5q 4 1 Chaos chaos NN cord-000238-om92cx5q 4 2 DOI doi NN cord-000238-om92cx5q 4 3 : : : cord-000238-om92cx5q 5 1 10.1063/1.3455189 10.1063/1.3455189 CD cord-000238-om92cx5q 5 2 sha sha NNP cord-000238-om92cx5q 5 3 : : : cord-000238-om92cx5q 5 4 a864ea529dd03034ad7bf347e1dee420a36ae8d2 a864ea529dd03034ad7bf347e1dee420a36ae8d2 CD cord-000238-om92cx5q 5 5 doc_id doc_id CD cord-000238-om92cx5q 5 6 : : : cord-000238-om92cx5q 5 7 238 238 CD cord-000238-om92cx5q 5 8 cord_uid cord_uid NNS cord-000238-om92cx5q 5 9 : : : cord-000238-om92cx5q 6 1 om92cx5q om92cx5q NNP cord-000238-om92cx5q 6 2 Robustness Robustness NNP cord-000238-om92cx5q 6 3 describes describe VBZ cord-000238-om92cx5q 6 4 the the DT cord-000238-om92cx5q 6 5 capacity capacity NN cord-000238-om92cx5q 6 6 for for IN cord-000238-om92cx5q 6 7 a a DT cord-000238-om92cx5q 6 8 biological biological JJ cord-000238-om92cx5q 6 9 system system NN cord-000238-om92cx5q 6 10 to to TO cord-000238-om92cx5q 6 11 remain remain VB cord-000238-om92cx5q 6 12 canalized canalize VBN cord-000238-om92cx5q 6 13 despite despite IN cord-000238-om92cx5q 6 14 perturbation perturbation NN cord-000238-om92cx5q 6 15 . . . cord-000238-om92cx5q 7 1 Genetic genetic JJ cord-000238-om92cx5q 7 2 robustness robustness NN cord-000238-om92cx5q 7 3 affords afford VBZ cord-000238-om92cx5q 7 4 maintenance maintenance NN cord-000238-om92cx5q 7 5 of of IN cord-000238-om92cx5q 7 6 phenotype phenotype NN cord-000238-om92cx5q 7 7 despite despite IN cord-000238-om92cx5q 7 8 mutational mutational JJ cord-000238-om92cx5q 7 9 input input NN cord-000238-om92cx5q 7 10 , , , cord-000238-om92cx5q 7 11 necessarily necessarily RB cord-000238-om92cx5q 7 12 involving involve VBG cord-000238-om92cx5q 7 13 the the DT cord-000238-om92cx5q 7 14 role role NN cord-000238-om92cx5q 7 15 of of IN cord-000238-om92cx5q 7 16 epistasis epistasis NN cord-000238-om92cx5q 7 17 . . . cord-000238-om92cx5q 8 1 Environmental environmental JJ cord-000238-om92cx5q 8 2 robustness robustness NN cord-000238-om92cx5q 8 3 is be VBZ cord-000238-om92cx5q 8 4 phenotypic phenotypic JJ cord-000238-om92cx5q 8 5 constancy constancy NN cord-000238-om92cx5q 8 6 in in IN cord-000238-om92cx5q 8 7 the the DT cord-000238-om92cx5q 8 8 face face NN cord-000238-om92cx5q 8 9 of of IN cord-000238-om92cx5q 8 10 environmental environmental JJ cord-000238-om92cx5q 8 11 variation variation NN cord-000238-om92cx5q 8 12 , , , cord-000238-om92cx5q 8 13 where where WRB cord-000238-om92cx5q 8 14 epistasis epistasis NN cord-000238-om92cx5q 8 15 may may MD cord-000238-om92cx5q 8 16 be be VB cord-000238-om92cx5q 8 17 uninvolved uninvolved JJ cord-000238-om92cx5q 8 18 . . . cord-000238-om92cx5q 9 1 Here here RB cord-000238-om92cx5q 9 2 we -PRON- PRP cord-000238-om92cx5q 9 3 discuss discuss VBP cord-000238-om92cx5q 9 4 genetic genetic JJ cord-000238-om92cx5q 9 5 and and CC cord-000238-om92cx5q 9 6 environmental environmental JJ cord-000238-om92cx5q 9 7 robustness robustness NN cord-000238-om92cx5q 9 8 , , , cord-000238-om92cx5q 9 9 from from IN cord-000238-om92cx5q 9 10 the the DT cord-000238-om92cx5q 9 11 standpoint standpoint NN cord-000238-om92cx5q 9 12 of of IN cord-000238-om92cx5q 9 13 infectious infectious JJ cord-000238-om92cx5q 9 14 disease disease NN cord-000238-om92cx5q 9 15 evolution evolution NN cord-000238-om92cx5q 9 16 , , , cord-000238-om92cx5q 9 17 and and CC cord-000238-om92cx5q 9 18 suggest suggest VBP cord-000238-om92cx5q 9 19 that that IN cord-000238-om92cx5q 9 20 robustness robustness NN cord-000238-om92cx5q 9 21 may may MD cord-000238-om92cx5q 9 22 be be VB cord-000238-om92cx5q 9 23 a a DT cord-000238-om92cx5q 9 24 unifying unifying JJ cord-000238-om92cx5q 9 25 principle principle NN cord-000238-om92cx5q 9 26 for for IN cord-000238-om92cx5q 9 27 understanding understand VBG cord-000238-om92cx5q 9 28 how how WRB cord-000238-om92cx5q 9 29 different different JJ cord-000238-om92cx5q 9 30 disease disease NN cord-000238-om92cx5q 9 31 agents agent NNS cord-000238-om92cx5q 9 32 evolve evolve VBP cord-000238-om92cx5q 9 33 . . . cord-000238-om92cx5q 10 1 We -PRON- PRP cord-000238-om92cx5q 10 2 focus focus VBP cord-000238-om92cx5q 10 3 especially especially RB cord-000238-om92cx5q 10 4 on on IN cord-000238-om92cx5q 10 5 viruses virus NNS cord-000238-om92cx5q 10 6 with with IN cord-000238-om92cx5q 10 7 RNA RNA NNP cord-000238-om92cx5q 10 8 genomes genome NNS cord-000238-om92cx5q 10 9 due due JJ cord-000238-om92cx5q 10 10 to to IN cord-000238-om92cx5q 10 11 their -PRON- PRP$ cord-000238-om92cx5q 10 12 importance importance NN cord-000238-om92cx5q 10 13 in in IN cord-000238-om92cx5q 10 14 the the DT cord-000238-om92cx5q 10 15 evolution evolution NN cord-000238-om92cx5q 10 16 of of IN cord-000238-om92cx5q 10 17 emerging emerge VBG cord-000238-om92cx5q 10 18 diseases disease NNS cord-000238-om92cx5q 10 19 and and CC cord-000238-om92cx5q 10 20 as as IN cord-000238-om92cx5q 10 21 model model NN cord-000238-om92cx5q 10 22 systems system NNS cord-000238-om92cx5q 10 23 to to TO cord-000238-om92cx5q 10 24 test test VB cord-000238-om92cx5q 10 25 robustness robustness NN cord-000238-om92cx5q 10 26 theory theory NN cord-000238-om92cx5q 10 27 . . . cord-000238-om92cx5q 11 1 We -PRON- PRP cord-000238-om92cx5q 11 2 present present VBP cord-000238-om92cx5q 11 3 new new JJ cord-000238-om92cx5q 11 4 data datum NNS cord-000238-om92cx5q 11 5 on on IN cord-000238-om92cx5q 11 6 adaptive adaptive JJ cord-000238-om92cx5q 11 7 constraints constraint NNS cord-000238-om92cx5q 11 8 for for IN cord-000238-om92cx5q 11 9 a a DT cord-000238-om92cx5q 11 10 model model NN cord-000238-om92cx5q 11 11 RNA RNA NNP cord-000238-om92cx5q 11 12 virus virus NN cord-000238-om92cx5q 11 13 challenged challenge VBD cord-000238-om92cx5q 11 14 to to TO cord-000238-om92cx5q 11 15 evolve evolve VB cord-000238-om92cx5q 11 16 in in IN cord-000238-om92cx5q 11 17 response response NN cord-000238-om92cx5q 11 18 to to IN cord-000238-om92cx5q 11 19 UV uv NN cord-000238-om92cx5q 11 20 radiation radiation NN cord-000238-om92cx5q 11 21 . . . cord-000238-om92cx5q 12 1 We -PRON- PRP cord-000238-om92cx5q 12 2 also also RB cord-000238-om92cx5q 12 3 draw draw VBP cord-000238-om92cx5q 12 4 attention attention NN cord-000238-om92cx5q 12 5 to to IN cord-000238-om92cx5q 12 6 other other JJ cord-000238-om92cx5q 12 7 infectious infectious JJ cord-000238-om92cx5q 12 8 disease disease NN cord-000238-om92cx5q 12 9 systems system NNS cord-000238-om92cx5q 12 10 where where WRB cord-000238-om92cx5q 12 11 robustness robustness NN cord-000238-om92cx5q 12 12 theory theory NN cord-000238-om92cx5q 12 13 may may MD cord-000238-om92cx5q 12 14 prove prove VB cord-000238-om92cx5q 12 15 useful useful JJ cord-000238-om92cx5q 12 16 for for IN cord-000238-om92cx5q 12 17 bridging bridge VBG cord-000238-om92cx5q 12 18 evolutionary evolutionary JJ cord-000238-om92cx5q 12 19 biology biology NN cord-000238-om92cx5q 12 20 and and CC cord-000238-om92cx5q 12 21 biomedicine biomedicine NN cord-000238-om92cx5q 12 22 , , , cord-000238-om92cx5q 12 23 especially especially RB cord-000238-om92cx5q 12 24 the the DT cord-000238-om92cx5q 12 25 evolution evolution NN cord-000238-om92cx5q 12 26 of of IN cord-000238-om92cx5q 12 27 antibiotic antibiotic JJ cord-000238-om92cx5q 12 28 resistance resistance NN cord-000238-om92cx5q 12 29 in in IN cord-000238-om92cx5q 12 30 bacteria bacteria NNS cord-000238-om92cx5q 12 31 , , , cord-000238-om92cx5q 12 32 immune immune JJ cord-000238-om92cx5q 12 33 evasion evasion NN cord-000238-om92cx5q 12 34 by by IN cord-000238-om92cx5q 12 35 influenza influenza NN cord-000238-om92cx5q 12 36 , , , cord-000238-om92cx5q 12 37 and and CC cord-000238-om92cx5q 12 38 malaria malaria NN cord-000238-om92cx5q 12 39 parasite parasite NN cord-000238-om92cx5q 12 40 infections infection NNS cord-000238-om92cx5q 12 41 . . . cord-000238-om92cx5q 13 1 In in IN cord-000238-om92cx5q 13 2 biology biology NN cord-000238-om92cx5q 13 3 , , , cord-000238-om92cx5q 13 4 robustness robustness NN cord-000238-om92cx5q 13 5 describes describe VBZ cord-000238-om92cx5q 13 6 the the DT cord-000238-om92cx5q 13 7 relative relative JJ cord-000238-om92cx5q 13 8 capacity capacity NN cord-000238-om92cx5q 13 9 for for IN cord-000238-om92cx5q 13 10 a a DT cord-000238-om92cx5q 13 11 biological biological JJ cord-000238-om92cx5q 13 12 system system NN cord-000238-om92cx5q 13 13 to to TO cord-000238-om92cx5q 13 14 maintain maintain VB cord-000238-om92cx5q 13 15 constancy constancy NN cord-000238-om92cx5q 13 16 of of IN cord-000238-om92cx5q 13 17 phenotype phenotype NN cord-000238-om92cx5q 13 18 ͑e.g ͑e.g , cord-000238-om92cx5q 13 19 . . . cord-000238-om92cx5q 14 1 , , , cord-000238-om92cx5q 14 2 population population NN cord-000238-om92cx5q 14 3 growth growth NN cord-000238-om92cx5q 14 4 , , , cord-000238-om92cx5q 14 5 individual individual JJ cord-000238-om92cx5q 14 6 development͒ development͒ '' cord-000238-om92cx5q 14 7 , , , cord-000238-om92cx5q 14 8 despite despite IN cord-000238-om92cx5q 14 9 perturbation perturbation NN cord-000238-om92cx5q 14 10 by by IN cord-000238-om92cx5q 14 11 mutation mutation NN cord-000238-om92cx5q 14 12 ͑genetic ͑genetic , cord-000238-om92cx5q 14 13 robustness͒ robustness͒ NNP cord-000238-om92cx5q 14 14 or or CC cord-000238-om92cx5q 14 15 by by IN cord-000238-om92cx5q 14 16 environmental environmental JJ cord-000238-om92cx5q 14 17 change change NN cord-000238-om92cx5q 14 18 ͑environmental ͑environmental . cord-000238-om92cx5q 15 1 robustness͒. robustness͒. NNP cord-000238-om92cx5q 15 2 [ [ -LRB- cord-000238-om92cx5q 15 3 1 1 CD cord-000238-om92cx5q 15 4 ] ] -RRB- cord-000238-om92cx5q 15 5 [ [ -LRB- cord-000238-om92cx5q 15 6 2 2 CD cord-000238-om92cx5q 15 7 ] ] -RRB- cord-000238-om92cx5q 15 8 [ [ -LRB- cord-000238-om92cx5q 15 9 3 3 CD cord-000238-om92cx5q 15 10 ] ] -RRB- cord-000238-om92cx5q 15 11 [ [ -LRB- cord-000238-om92cx5q 15 12 4 4 CD cord-000238-om92cx5q 15 13 ] ] -RRB- cord-000238-om92cx5q 15 14 Epistasis Epistasis NNP cord-000238-om92cx5q 15 15 is be VBZ cord-000238-om92cx5q 15 16 implicit implicit JJ cord-000238-om92cx5q 15 17 in in IN cord-000238-om92cx5q 15 18 genetic genetic JJ cord-000238-om92cx5q 15 19 robustness robustness NN cord-000238-om92cx5q 15 20 ; ; : cord-000238-om92cx5q 15 21 a a DT cord-000238-om92cx5q 15 22 robust robust JJ cord-000238-om92cx5q 15 23 genome genome NN cord-000238-om92cx5q 15 24 tends tend VBZ cord-000238-om92cx5q 15 25 to to TO cord-000238-om92cx5q 15 26 retain retain VB cord-000238-om92cx5q 15 27 phenotype phenotype NN cord-000238-om92cx5q 15 28 when when WRB cord-000238-om92cx5q 15 29 a a DT cord-000238-om92cx5q 15 30 mutation mutation NN cord-000238-om92cx5q 15 31 is be VBZ cord-000238-om92cx5q 15 32 introduced introduce VBN cord-000238-om92cx5q 15 33 , , , cord-000238-om92cx5q 15 34 whereas whereas IN cord-000238-om92cx5q 15 35 the the DT cord-000238-om92cx5q 15 36 identical identical JJ cord-000238-om92cx5q 15 37 mutation mutation NN cord-000238-om92cx5q 15 38 is be VBZ cord-000238-om92cx5q 15 39 expected expect VBN cord-000238-om92cx5q 15 40 to to TO cord-000238-om92cx5q 15 41 typically typically RB cord-000238-om92cx5q 15 42 alter alter VB cord-000238-om92cx5q 15 43 phenotype phenotype NN cord-000238-om92cx5q 15 44 when when WRB cord-000238-om92cx5q 15 45 placed place VBN cord-000238-om92cx5q 15 46 in in IN cord-000238-om92cx5q 15 47 a a DT cord-000238-om92cx5q 15 48 brittle brittle JJ cord-000238-om92cx5q 15 49 ͑nonrobust͒ ͑nonrobust͒ NN cord-000238-om92cx5q 15 50 genetic genetic JJ cord-000238-om92cx5q 15 51 background background NN cord-000238-om92cx5q 15 52 . . . cord-000238-om92cx5q 16 1 Both both DT cord-000238-om92cx5q 16 2 types type NNS cord-000238-om92cx5q 16 3 of of IN cord-000238-om92cx5q 16 4 robustness robustness NN cord-000238-om92cx5q 16 5 are be VBP cord-000238-om92cx5q 16 6 central central JJ cord-000238-om92cx5q 16 7 to to IN cord-000238-om92cx5q 16 8 evolutionary evolutionary JJ cord-000238-om92cx5q 16 9 biology biology NN cord-000238-om92cx5q 16 10 because because IN cord-000238-om92cx5q 16 11 robustness robustness NN cord-000238-om92cx5q 16 12 dictates dictate VBZ cord-000238-om92cx5q 16 13 how how WRB cord-000238-om92cx5q 16 14 organisms organism NNS cord-000238-om92cx5q 16 15 respond respond VBP cord-000238-om92cx5q 16 16 to to IN cord-000238-om92cx5q 16 17 environmental environmental JJ cord-000238-om92cx5q 16 18 challenges challenge NNS cord-000238-om92cx5q 16 19 , , , cord-000238-om92cx5q 16 20 the the DT cord-000238-om92cx5q 16 21 very very JJ cord-000238-om92cx5q 16 22 crux crux NN cord-000238-om92cx5q 16 23 of of IN cord-000238-om92cx5q 16 24 natural natural JJ cord-000238-om92cx5q 16 25 selection selection NN cord-000238-om92cx5q 16 26 . . . cord-000238-om92cx5q 17 1 Advancements advancement NNS cord-000238-om92cx5q 17 2 in in IN cord-000238-om92cx5q 17 3 the the DT cord-000238-om92cx5q 17 4 understanding understanding NN cord-000238-om92cx5q 17 5 of of IN cord-000238-om92cx5q 17 6 robustness robustness NN cord-000238-om92cx5q 17 7 and and CC cord-000238-om92cx5q 17 8 its -PRON- PRP$ cord-000238-om92cx5q 17 9 evolution evolution NN cord-000238-om92cx5q 17 10 have have VBP cord-000238-om92cx5q 17 11 often often RB cord-000238-om92cx5q 17 12 arrived arrive VBN cord-000238-om92cx5q 17 13 through through IN cord-000238-om92cx5q 17 14 theoretical theoretical JJ cord-000238-om92cx5q 17 15 studies study NNS cord-000238-om92cx5q 17 16 , , , cord-000238-om92cx5q 17 17 [ [ -LRB- cord-000238-om92cx5q 17 18 5 5 CD cord-000238-om92cx5q 17 19 ] ] -RRB- cord-000238-om92cx5q 17 20 [ [ -LRB- cord-000238-om92cx5q 17 21 6 6 CD cord-000238-om92cx5q 17 22 ] ] -RRB- cord-000238-om92cx5q 17 23 [ [ -LRB- cord-000238-om92cx5q 17 24 7 7 CD cord-000238-om92cx5q 17 25 ] ] -RRB- cord-000238-om92cx5q 18 1 [ [ -LRB- cord-000238-om92cx5q 18 2 8 8 CD cord-000238-om92cx5q 18 3 ] ] -RRB- cord-000238-om92cx5q 19 1 but but CC cord-000238-om92cx5q 19 2 empirical empirical JJ cord-000238-om92cx5q 19 3 studies study NNS cord-000238-om92cx5q 19 4 have have VBP cord-000238-om92cx5q 19 5 made make VBN cord-000238-om92cx5q 19 6 recent recent JJ cord-000238-om92cx5q 19 7 in in IN cord-000238-om92cx5q 19 8 - - HYPH cord-000238-om92cx5q 19 9 roads road NNS cord-000238-om92cx5q 19 10 . . . cord-000238-om92cx5q 20 1 Experiments experiment NNS cord-000238-om92cx5q 20 2 using use VBG cord-000238-om92cx5q 20 3 artificial artificial JJ cord-000238-om92cx5q 20 4 life life NN cord-000238-om92cx5q 20 5 ͑"digital ͑"digital IN cord-000238-om92cx5q 20 6 organisms organism NNS cord-000238-om92cx5q 20 7 , , , cord-000238-om92cx5q 20 8 " " '' cord-000238-om92cx5q 20 9 selfreplicating selfreplicate VBG cord-000238-om92cx5q 20 10 computer computer NN cord-000238-om92cx5q 20 11 programs program NNS cord-000238-om92cx5q 20 12 that that WDT cord-000238-om92cx5q 20 13 can can MD cord-000238-om92cx5q 20 14 evolve͒ evolve͒ VB cord-000238-om92cx5q 20 15 valuably valuably RB cord-000238-om92cx5q 20 16 demonstrated demonstrate VBD cord-000238-om92cx5q 20 17 that that IN cord-000238-om92cx5q 20 18 elevated elevated JJ cord-000238-om92cx5q 20 19 mutation mutation NN cord-000238-om92cx5q 20 20 rates rate NNS cord-000238-om92cx5q 20 21 can can MD cord-000238-om92cx5q 20 22 select select VB cord-000238-om92cx5q 20 23 for for IN cord-000238-om92cx5q 20 24 evolved evolved JJ cord-000238-om92cx5q 20 25 increases increase NNS cord-000238-om92cx5q 20 26 in in IN cord-000238-om92cx5q 20 27 genetic genetic JJ cord-000238-om92cx5q 20 28 robustness robustness NN cord-000238-om92cx5q 20 29 to to TO cord-000238-om92cx5q 20 30 tolerate tolerate VB cord-000238-om92cx5q 20 31 mutation mutation NN cord-000238-om92cx5q 20 32 , , , cord-000238-om92cx5q 20 33 even even RB cord-000238-om92cx5q 20 34 at at IN cord-000238-om92cx5q 20 35 the the DT cord-000238-om92cx5q 20 36 expense expense NN cord-000238-om92cx5q 20 37 of of IN cord-000238-om92cx5q 20 38 reduced reduce VBN cord-000238-om92cx5q 20 39 reproductive reproductive JJ cord-000238-om92cx5q 20 40 fitness fitness NN cord-000238-om92cx5q 20 41 . . . cord-000238-om92cx5q 21 1 9 9 CD cord-000238-om92cx5q 22 1 The the DT cord-000238-om92cx5q 22 2 explanation explanation NN cord-000238-om92cx5q 22 3 was be VBD cord-000238-om92cx5q 22 4 that that IN cord-000238-om92cx5q 22 5 high high JJ cord-000238-om92cx5q 22 6 mutation mutation NN cord-000238-om92cx5q 22 7 rates rate NNS cord-000238-om92cx5q 22 8 could could MD cord-000238-om92cx5q 22 9 selectively selectively RB cord-000238-om92cx5q 22 10 favor favor VB cord-000238-om92cx5q 22 11 genetic genetic JJ cord-000238-om92cx5q 22 12 variants variant NNS cord-000238-om92cx5q 22 13 that that WDT cord-000238-om92cx5q 22 14 were be VBD cord-000238-om92cx5q 22 15 not not RB cord-000238-om92cx5q 22 16 necessarily necessarily RB cord-000238-om92cx5q 22 17 productive productive JJ cord-000238-om92cx5q 22 18 and and CC cord-000238-om92cx5q 22 19 resided reside VBD cord-000238-om92cx5q 22 20 on on IN cord-000238-om92cx5q 22 21 flat flat JJ cord-000238-om92cx5q 22 22 regions region NNS cord-000238-om92cx5q 22 23 of of IN cord-000238-om92cx5q 22 24 the the DT cord-000238-om92cx5q 22 25 " " `` cord-000238-om92cx5q 22 26 fitness fitness NN cord-000238-om92cx5q 22 27 landscape landscape NN cord-000238-om92cx5q 22 28 ; ; : cord-000238-om92cx5q 22 29 " " `` cord-000238-om92cx5q 22 30 these these DT cord-000238-om92cx5q 22 31 robust robust JJ cord-000238-om92cx5q 22 32 genotypes genotype NNS cord-000238-om92cx5q 22 33 formed form VBD cord-000238-om92cx5q 22 34 an an DT cord-000238-om92cx5q 22 35 epistatic epistatic JJ cord-000238-om92cx5q 22 36 network network NN cord-000238-om92cx5q 22 37 that that WDT cord-000238-om92cx5q 22 38 produced produce VBD cord-000238-om92cx5q 22 39 equally equally RB cord-000238-om92cx5q 22 40 fit fit JJ cord-000238-om92cx5q 22 41 phenotypes phenotype NNS cord-000238-om92cx5q 22 42 despite despite IN cord-000238-om92cx5q 22 43 mutation mutation NN cord-000238-om92cx5q 22 44 - - HYPH cord-000238-om92cx5q 22 45 induced induce VBN cord-000238-om92cx5q 22 46 movement movement NN cord-000238-om92cx5q 22 47 across across IN cord-000238-om92cx5q 22 48 the the DT cord-000238-om92cx5q 22 49 landscape landscape NN cord-000238-om92cx5q 23 1 ͑Fig ͑Fig NNP cord-000238-om92cx5q 23 2 . . . cord-000238-om92cx5q 24 1 1͒. 1͒. CD cord-000238-om92cx5q 24 2 6 6 CD cord-000238-om92cx5q 24 3 , , , cord-000238-om92cx5q 24 4 8 8 CD cord-000238-om92cx5q 24 5 , , , cord-000238-om92cx5q 24 6 10 10 CD cord-000238-om92cx5q 24 7 Other other JJ cord-000238-om92cx5q 24 8 landmark landmark NN cord-000238-om92cx5q 24 9 studies study NNS cord-000238-om92cx5q 24 10 have have VBP cord-000238-om92cx5q 24 11 successfully successfully RB cord-000238-om92cx5q 24 12 examined examine VBN cord-000238-om92cx5q 24 13 robustness robustness NN cord-000238-om92cx5q 24 14 by by IN cord-000238-om92cx5q 24 15 considering consider VBG cord-000238-om92cx5q 24 16 phenotypic phenotypic JJ cord-000238-om92cx5q 24 17 effects effect NNS cord-000238-om92cx5q 24 18 of of IN cord-000238-om92cx5q 24 19 mutations mutation NNS cord-000238-om92cx5q 24 20 underlying underlie VBG cord-000238-om92cx5q 24 21 proteins protein NNS cord-000238-om92cx5q 24 22 using use VBG cord-000238-om92cx5q 24 23 computational computational JJ cord-000238-om92cx5q 24 24 and and CC cord-000238-om92cx5q 24 25 in in IN cord-000238-om92cx5q 24 26 vitro vitro FW cord-000238-om92cx5q 24 27 approaches approach NNS cord-000238-om92cx5q 24 28 . . . cord-000238-om92cx5q 25 1 11 11 CD cord-000238-om92cx5q 25 2 , , , cord-000238-om92cx5q 25 3 12 12 CD cord-000238-om92cx5q 25 4 Viruses virus NNS cord-000238-om92cx5q 25 5 with with IN cord-000238-om92cx5q 25 6 RNA RNA NNP cord-000238-om92cx5q 25 7 genomes genome NNS cord-000238-om92cx5q 25 8 are be VBP cord-000238-om92cx5q 25 9 natural natural JJ cord-000238-om92cx5q 25 10 systems system NNS cord-000238-om92cx5q 25 11 that that WDT cord-000238-om92cx5q 25 12 typically typically RB cord-000238-om92cx5q 25 13 experience experience VBP cord-000238-om92cx5q 25 14 high high JJ cord-000238-om92cx5q 25 15 mutation mutation NN cord-000238-om92cx5q 25 16 rates rate NNS cord-000238-om92cx5q 25 17 owing owe VBG cord-000238-om92cx5q 25 18 to to IN cord-000238-om92cx5q 25 19 their -PRON- PRP$ cord-000238-om92cx5q 25 20 lack lack NN cord-000238-om92cx5q 25 21 of of IN cord-000238-om92cx5q 25 22 error error NN cord-000238-om92cx5q 25 23 - - HYPH cord-000238-om92cx5q 25 24 repair repair NN cord-000238-om92cx5q 25 25 during during IN cord-000238-om92cx5q 25 26 replication replication NN cord-000238-om92cx5q 25 27 . . . cord-000238-om92cx5q 26 1 Thus thus RB cord-000238-om92cx5q 26 2 , , , cord-000238-om92cx5q 26 3 RNA RNA NNP cord-000238-om92cx5q 26 4 viruses virus NNS cord-000238-om92cx5q 26 5 have have VBP cord-000238-om92cx5q 26 6 proved prove VBN cord-000238-om92cx5q 26 7 to to TO cord-000238-om92cx5q 26 8 be be VB cord-000238-om92cx5q 26 9 useful useful JJ cord-000238-om92cx5q 26 10 and and CC cord-000238-om92cx5q 26 11 tractable tractable JJ cord-000238-om92cx5q 26 12 models model NNS cord-000238-om92cx5q 26 13 for for IN cord-000238-om92cx5q 26 14 studying study VBG cord-000238-om92cx5q 26 15 robustness robustness NN cord-000238-om92cx5q 26 16 evolution evolution NN cord-000238-om92cx5q 26 17 in in IN cord-000238-om92cx5q 26 18 biological biological JJ cord-000238-om92cx5q 26 19 populations population NNS cord-000238-om92cx5q 26 20 . . . cord-000238-om92cx5q 27 1 This this DT cord-000238-om92cx5q 27 2 work work NN cord-000238-om92cx5q 27 3 has have VBZ cord-000238-om92cx5q 27 4 focused focus VBN cord-000238-om92cx5q 27 5 on on IN cord-000238-om92cx5q 27 6 the the DT cord-000238-om92cx5q 27 7 success success NN cord-000238-om92cx5q 27 8 of of IN cord-000238-om92cx5q 27 9 robust robust JJ cord-000238-om92cx5q 27 10 versus versus IN cord-000238-om92cx5q 27 11 nonrobust nonrobust NNP cord-000238-om92cx5q 27 12 RNA RNA NNP cord-000238-om92cx5q 27 13 virus virus NN cord-000238-om92cx5q 27 14 variants variant NNS cord-000238-om92cx5q 27 15 when when WRB cord-000238-om92cx5q 27 16 mutation mutation NN cord-000238-om92cx5q 27 17 rates rate NNS cord-000238-om92cx5q 27 18 are be VBP cord-000238-om92cx5q 27 19 further further RB cord-000238-om92cx5q 27 20 elevated elevate VBN cord-000238-om92cx5q 27 21 through through IN cord-000238-om92cx5q 27 22 exposure exposure NN cord-000238-om92cx5q 27 23 to to IN cord-000238-om92cx5q 27 24 ultraviolet ultraviolet NN cord-000238-om92cx5q 27 25 ͑UV͒ ͑UV͒ . cord-000238-om92cx5q 27 26 light light NN cord-000238-om92cx5q 27 27 and and CC cord-000238-om92cx5q 27 28 other other JJ cord-000238-om92cx5q 27 29 mutagens mutagen NNS cord-000238-om92cx5q 27 30 , , , cord-000238-om92cx5q 27 31 13 13 CD cord-000238-om92cx5q 27 32 and and CC cord-000238-om92cx5q 27 33 on on IN cord-000238-om92cx5q 27 34 evolved evolved JJ cord-000238-om92cx5q 27 35 changes change NNS cord-000238-om92cx5q 27 36 in in IN cord-000238-om92cx5q 27 37 robustness robustness NN cord-000238-om92cx5q 27 38 under under IN cord-000238-om92cx5q 27 39 frequent frequent JJ cord-000238-om92cx5q 27 40 virus virus NN cord-000238-om92cx5q 27 41 coin coin NN cord-000238-om92cx5q 27 42 - - HYPH cord-000238-om92cx5q 27 43 fection fection NN cord-000238-om92cx5q 27 44 , , , cord-000238-om92cx5q 27 45 which which WDT cord-000238-om92cx5q 27 46 allows allow VBZ cord-000238-om92cx5q 27 47 buffering buffering NN cord-000238-om92cx5q 27 48 of of IN cord-000238-om92cx5q 27 49 mutational mutational JJ cord-000238-om92cx5q 27 50 effects effect NNS cord-000238-om92cx5q 27 51 via via IN cord-000238-om92cx5q 27 52 complementation complementation NN cord-000238-om92cx5q 27 53 . . . cord-000238-om92cx5q 28 1 14 14 CD cord-000238-om92cx5q 29 1 Below below IN cord-000238-om92cx5q 29 2 we -PRON- PRP cord-000238-om92cx5q 29 3 review review VBP cord-000238-om92cx5q 29 4 some some DT cord-000238-om92cx5q 29 5 of of IN cord-000238-om92cx5q 29 6 the the DT cord-000238-om92cx5q 29 7 evidence evidence NN cord-000238-om92cx5q 29 8 from from IN cord-000238-om92cx5q 29 9 these these DT cord-000238-om92cx5q 29 10 studies study NNS cord-000238-om92cx5q 29 11 , , , cord-000238-om92cx5q 29 12 and and CC cord-000238-om92cx5q 29 13 present present JJ cord-000238-om92cx5q 29 14 new new JJ cord-000238-om92cx5q 29 15 findings finding NNS cord-000238-om92cx5q 29 16 from from IN cord-000238-om92cx5q 29 17 an an DT cord-000238-om92cx5q 29 18 increasingly increasingly RB cord-000238-om92cx5q 29 19 popular popular JJ cord-000238-om92cx5q 29 20 model model NN cord-000238-om92cx5q 29 21 system system NN cord-000238-om92cx5q 29 22 for for IN cord-000238-om92cx5q 29 23 examining examine VBG cord-000238-om92cx5q 29 24 evolution evolution NN cord-000238-om92cx5q 29 25 of of IN cord-000238-om92cx5q 29 26 robustness robustness NN cord-000238-om92cx5q 29 27 : : : cord-000238-om92cx5q 29 28 the the DT cord-000238-om92cx5q 29 29 segmented segmented JJ cord-000238-om92cx5q 29 30 RNA RNA NNP cord-000238-om92cx5q 29 31 bacteriophage bacteriophage NN cord-000238-om92cx5q 29 32 6 6 CD cord-000238-om92cx5q 29 33 . . . cord-000238-om92cx5q 30 1 [ [ -LRB- cord-000238-om92cx5q 30 2 14 14 CD cord-000238-om92cx5q 30 3 ] ] -RRB- cord-000238-om92cx5q 30 4 [ [ -LRB- cord-000238-om92cx5q 30 5 15 15 CD cord-000238-om92cx5q 30 6 ] ] -RRB- cord-000238-om92cx5q 30 7 [ [ -LRB- cord-000238-om92cx5q 30 8 16 16 CD cord-000238-om92cx5q 30 9 ] ] -RRB- cord-000238-om92cx5q 31 1 In in IN cord-000238-om92cx5q 31 2 reviewing review VBG cord-000238-om92cx5q 31 3 these these DT cord-000238-om92cx5q 31 4 results result NNS cord-000238-om92cx5q 31 5 , , , cord-000238-om92cx5q 31 6 we -PRON- PRP cord-000238-om92cx5q 31 7 hope hope VBP cord-000238-om92cx5q 31 8 to to TO cord-000238-om92cx5q 31 9 highlight highlight VB cord-000238-om92cx5q 31 10 the the DT cord-000238-om92cx5q 31 11 importance importance NN cord-000238-om92cx5q 31 12 of of IN cord-000238-om92cx5q 31 13 empirical empirical JJ cord-000238-om92cx5q 31 14 work work NN cord-000238-om92cx5q 31 15 in in IN cord-000238-om92cx5q 31 16 RNA RNA NNP cord-000238-om92cx5q 31 17 viruses virus NNS cord-000238-om92cx5q 31 18 for for IN cord-000238-om92cx5q 31 19 testing testing NN cord-000238-om92cx5q 31 20 theory theory NN cord-000238-om92cx5q 31 21 pertaining pertain VBG cord-000238-om92cx5q 31 22 to to IN cord-000238-om92cx5q 31 23 robustness robustness NN cord-000238-om92cx5q 31 24 , , , cord-000238-om92cx5q 31 25 as as RB cord-000238-om92cx5q 31 26 well well RB cord-000238-om92cx5q 31 27 as as IN cord-000238-om92cx5q 31 28 for for IN cord-000238-om92cx5q 31 29 better well JJR cord-000238-om92cx5q 31 30 understanding understand VBG cord-000238-om92cx5q 31 31 the the DT cord-000238-om92cx5q 31 32 evolutionary evolutionary JJ cord-000238-om92cx5q 31 33 biology biology NN cord-000238-om92cx5q 31 34 and and CC cord-000238-om92cx5q 31 35 evolvability evolvability NN cord-000238-om92cx5q 31 36 of of IN cord-000238-om92cx5q 31 37 infectious infectious JJ cord-000238-om92cx5q 31 38 organisms organism NNS cord-000238-om92cx5q 31 39 in in IN cord-000238-om92cx5q 31 40 general general JJ cord-000238-om92cx5q 31 41 . . . cord-000238-om92cx5q 32 1 Our -PRON- PRP$ cord-000238-om92cx5q 32 2 second second JJ cord-000238-om92cx5q 32 3 main main JJ cord-000238-om92cx5q 32 4 goal goal NN cord-000238-om92cx5q 32 5 is be VBZ cord-000238-om92cx5q 32 6 to to TO cord-000238-om92cx5q 32 7 review review VB cord-000238-om92cx5q 32 8 the the DT cord-000238-om92cx5q 32 9 evidence evidence NN cord-000238-om92cx5q 32 10 from from IN cord-000238-om92cx5q 32 11 biomedically biomedically RB cord-000238-om92cx5q 32 12 important important JJ cord-000238-om92cx5q 32 13 infectious infectious JJ cord-000238-om92cx5q 32 14 diseases disease NNS cord-000238-om92cx5q 32 15 of of IN cord-000238-om92cx5q 32 16 humans human NNS cord-000238-om92cx5q 32 17 , , , cord-000238-om92cx5q 32 18 describing describe VBG cord-000238-om92cx5q 32 19 how how WRB cord-000238-om92cx5q 32 20 the the DT cord-000238-om92cx5q 32 21 success success NN cord-000238-om92cx5q 32 22 of of IN cord-000238-om92cx5q 32 23 various various JJ cord-000238-om92cx5q 32 24 disease disease NN cord-000238-om92cx5q 32 25 agents agent NNS cord-000238-om92cx5q 32 26 may may MD cord-000238-om92cx5q 32 27 be be VB cord-000238-om92cx5q 32 28 commonly commonly RB cord-000238-om92cx5q 32 29 considered consider VBN cord-000238-om92cx5q 32 30 in in IN cord-000238-om92cx5q 32 31 light light NN cord-000238-om92cx5q 32 32 of of IN cord-000238-om92cx5q 32 33 their -PRON- PRP$ cord-000238-om92cx5q 32 34 genetic genetic JJ cord-000238-om92cx5q 32 35 and/or and/or CC cord-000238-om92cx5q 32 36 environmental environmental JJ cord-000238-om92cx5q 32 37 robustness robustness NN cord-000238-om92cx5q 32 38 . . . cord-000238-om92cx5q 33 1 The the DT cord-000238-om92cx5q 33 2 importance importance NN cord-000238-om92cx5q 33 3 of of IN cord-000238-om92cx5q 33 4 robustness robustness NN cord-000238-om92cx5q 33 5 has have VBZ cord-000238-om92cx5q 33 6 been be VBN cord-000238-om92cx5q 33 7 discussed discuss VBN cord-000238-om92cx5q 33 8 in in IN cord-000238-om92cx5q 33 9 the the DT cord-000238-om92cx5q 33 10 context context NN cord-000238-om92cx5q 33 11 of of IN cord-000238-om92cx5q 33 12 noninfectious noninfectious JJ cord-000238-om92cx5q 33 13 diseases disease NNS cord-000238-om92cx5q 33 14 such such JJ cord-000238-om92cx5q 33 15 as as IN cord-000238-om92cx5q 33 16 cancers cancer NNS cord-000238-om92cx5q 33 17 and and CC cord-000238-om92cx5q 33 18 metabolic metabolic JJ cord-000238-om92cx5q 33 19 syndromes syndrome NNS cord-000238-om92cx5q 33 20 . . . cord-000238-om92cx5q 34 1 17 17 CD cord-000238-om92cx5q 34 2 , , , cord-000238-om92cx5q 34 3 18 18 CD cord-000238-om92cx5q 34 4 Here here RB cord-000238-om92cx5q 34 5 we -PRON- PRP cord-000238-om92cx5q 34 6 focus focus VBP cord-000238-om92cx5q 34 7 particularly particularly RB cord-000238-om92cx5q 34 8 on on IN cord-000238-om92cx5q 34 9 infectious infectious JJ cord-000238-om92cx5q 34 10 disease disease NN cord-000238-om92cx5q 34 11 systems system NNS cord-000238-om92cx5q 34 12 : : : cord-000238-om92cx5q 35 1 the the DT cord-000238-om92cx5q 35 2 evolution evolution NN cord-000238-om92cx5q 35 3 of of IN cord-000238-om92cx5q 35 4 antibiotic antibiotic JJ cord-000238-om92cx5q 35 5 resistance resistance NN cord-000238-om92cx5q 35 6 in in IN cord-000238-om92cx5q 35 7 bacteria bacteria NNS cord-000238-om92cx5q 35 8 , , , cord-000238-om92cx5q 35 9 influenza influenza NN cord-000238-om92cx5q 35 10 virus virus NN cord-000238-om92cx5q 35 11 host host NN cord-000238-om92cx5q 35 12 shifts shift NNS cord-000238-om92cx5q 35 13 , , , cord-000238-om92cx5q 35 14 and and CC cord-000238-om92cx5q 35 15 malaria malaria NN cord-000238-om92cx5q 35 16 parasite parasite NN cord-000238-om92cx5q 35 17 invasion invasion NN cord-000238-om92cx5q 35 18 . . . cord-000238-om92cx5q 36 1 A a DT cord-000238-om92cx5q 36 2 review review NN cord-000238-om92cx5q 36 3 of of IN cord-000238-om92cx5q 36 4 these these DT cord-000238-om92cx5q 36 5 studies study NNS cord-000238-om92cx5q 36 6 seeks seek VBZ cord-000238-om92cx5q 36 7 to to TO cord-000238-om92cx5q 36 8 further further RB cord-000238-om92cx5q 36 9 demonstrate demonstrate VB cord-000238-om92cx5q 36 10 the the DT cord-000238-om92cx5q 36 11 broad broad JJ cord-000238-om92cx5q 36 12 importance importance NN cord-000238-om92cx5q 36 13 of of IN cord-000238-om92cx5q 36 14 robustness robustness NN cord-000238-om92cx5q 36 15 to to IN cord-000238-om92cx5q 36 16 theories theory NNS cord-000238-om92cx5q 36 17 of of IN cord-000238-om92cx5q 36 18 biological biological JJ cord-000238-om92cx5q 36 19 systems system NNS cord-000238-om92cx5q 36 20 , , , cord-000238-om92cx5q 36 21 and and CC cord-000238-om92cx5q 36 22 the the DT cord-000238-om92cx5q 36 23 evolution evolution NN cord-000238-om92cx5q 36 24 of of IN cord-000238-om92cx5q 36 25 infectious infectious JJ cord-000238-om92cx5q 36 26 disease disease NN cord-000238-om92cx5q 36 27 . . . cord-000238-om92cx5q 37 1 If if IN cord-000238-om92cx5q 37 2 a a DT cord-000238-om92cx5q 37 3 population population NN cord-000238-om92cx5q 37 4 is be VBZ cord-000238-om92cx5q 37 5 well well RB cord-000238-om92cx5q 37 6 - - HYPH cord-000238-om92cx5q 37 7 adapted adapt VBN cord-000238-om92cx5q 37 8 to to IN cord-000238-om92cx5q 37 9 its -PRON- PRP$ cord-000238-om92cx5q 37 10 environment environment NN cord-000238-om92cx5q 37 11 , , , cord-000238-om92cx5q 37 12 almost almost RB cord-000238-om92cx5q 37 13 all all DT cord-000238-om92cx5q 37 14 mutations mutation NNS cord-000238-om92cx5q 37 15 should should MD cord-000238-om92cx5q 37 16 lead lead VB cord-000238-om92cx5q 37 17 to to IN cord-000238-om92cx5q 37 18 deviations deviation NNS cord-000238-om92cx5q 37 19 from from IN cord-000238-om92cx5q 37 20 optimal optimal JJ cord-000238-om92cx5q 37 21 performance performance NN cord-000238-om92cx5q 37 22 in in IN cord-000238-om92cx5q 37 23 the the DT cord-000238-om92cx5q 37 24 selective selective JJ cord-000238-om92cx5q 37 25 habitat habitat NN cord-000238-om92cx5q 37 26 . . . cord-000238-om92cx5q 38 1 Therefore therefore RB cord-000238-om92cx5q 38 2 , , , cord-000238-om92cx5q 38 3 populations population NNS cord-000238-om92cx5q 38 4 at at IN cord-000238-om92cx5q 38 5 equilibrium equilibrium NN cord-000238-om92cx5q 38 6 are be VBP cord-000238-om92cx5q 38 7 expected expect VBN cord-000238-om92cx5q 38 8 to to TO cord-000238-om92cx5q 38 9 experience experience VB cord-000238-om92cx5q 38 10 selection selection NN cord-000238-om92cx5q 38 11 for for IN cord-000238-om92cx5q 38 12 genetic genetic JJ cord-000238-om92cx5q 38 13 robustness robustness NN cord-000238-om92cx5q 38 14 . . . cord-000238-om92cx5q 39 1 But but CC cord-000238-om92cx5q 39 2 study study NN cord-000238-om92cx5q 39 3 of of IN cord-000238-om92cx5q 39 4 this this DT cord-000238-om92cx5q 39 5 process process NN cord-000238-om92cx5q 39 6 in in IN cord-000238-om92cx5q 39 7 experimental experimental JJ cord-000238-om92cx5q 39 8 populations population NNS cord-000238-om92cx5q 39 9 is be VBZ cord-000238-om92cx5q 39 10 problematic problematic JJ cord-000238-om92cx5q 39 11 for for IN cord-000238-om92cx5q 39 12 at at RB cord-000238-om92cx5q 39 13 least least RBS cord-000238-om92cx5q 39 14 two two CD cord-000238-om92cx5q 39 15 reasons reason NNS cord-000238-om92cx5q 39 16 : : : cord-000238-om92cx5q 39 17 equilibrium equilibrium NN cord-000238-om92cx5q 39 18 states state NNS cord-000238-om92cx5q 39 19 are be VBP cord-000238-om92cx5q 39 20 difficult difficult JJ cord-000238-om92cx5q 39 21 to to TO cord-000238-om92cx5q 39 22 achieve achieve VB cord-000238-om92cx5q 39 23 ͑or ͑or NNP cord-000238-om92cx5q 39 24 definitively definitively RB cord-000238-om92cx5q 39 25 prove͒ prove͒ JJ cord-000238-om92cx5q 39 26 in in IN cord-000238-om92cx5q 39 27 lab lab NN cord-000238-om92cx5q 39 28 - - HYPH cord-000238-om92cx5q 39 29 evolved evolve VBN cord-000238-om92cx5q 39 30 populations population NNS cord-000238-om92cx5q 39 31 , , , cord-000238-om92cx5q 39 32 and and CC cord-000238-om92cx5q 39 33 selection selection NN cord-000238-om92cx5q 39 34 for for IN cord-000238-om92cx5q 39 35 mutational mutational JJ cord-000238-om92cx5q 39 36 robustness robustness NN cord-000238-om92cx5q 39 37 is be VBZ cord-000238-om92cx5q 39 38 " " `` cord-000238-om92cx5q 39 39 second second JJ cord-000238-om92cx5q 39 40 - - HYPH cord-000238-om92cx5q 39 41 order order NN cord-000238-om92cx5q 39 42 " " '' cord-000238-om92cx5q 39 43 because because IN cord-000238-om92cx5q 39 44 the the DT cord-000238-om92cx5q 39 45 benefit benefit NN cord-000238-om92cx5q 39 46 is be VBZ cord-000238-om92cx5q 39 47 not not RB cord-000238-om92cx5q 39 48 experienced experience VBN cord-000238-om92cx5q 39 49 until until IN cord-000238-om92cx5q 39 50 offspring offspring NN cord-000238-om92cx5q 39 51 carrying carrying NN cord-000238-om92cx5q 39 52 mutations mutation NNS cord-000238-om92cx5q 39 53 arise arise VBP cord-000238-om92cx5q 39 54 . . . cord-000238-om92cx5q 40 1 1 1 LS cord-000238-om92cx5q 41 1 However however RB cord-000238-om92cx5q 41 2 , , , cord-000238-om92cx5q 41 3 theory theory NN cord-000238-om92cx5q 41 4 and and CC cord-000238-om92cx5q 41 5 artificial artificial JJ cord-000238-om92cx5q 41 6 - - HYPH cord-000238-om92cx5q 41 7 life life NN cord-000238-om92cx5q 41 8 data datum NNS cord-000238-om92cx5q 41 9 9 9 CD cord-000238-om92cx5q 41 10 support support VBP cord-000238-om92cx5q 41 11 the the DT cord-000238-om92cx5q 41 12 idea idea NN cord-000238-om92cx5q 41 13 that that IN cord-000238-om92cx5q 41 14 genetic genetic JJ cord-000238-om92cx5q 41 15 robustness robustness NN cord-000238-om92cx5q 41 16 should should MD cord-000238-om92cx5q 41 17 be be VB cord-000238-om92cx5q 41 18 strongly strongly RB cord-000238-om92cx5q 41 19 favored favor VBN cord-000238-om92cx5q 41 20 when when WRB cord-000238-om92cx5q 41 21 populations population NNS cord-000238-om92cx5q 41 22 experience experience VBP cord-000238-om92cx5q 41 23 elevated elevated JJ cord-000238-om92cx5q 41 24 mutation mutation NN cord-000238-om92cx5q 41 25 rates rate NNS cord-000238-om92cx5q 41 26 , , , cord-000238-om92cx5q 41 27 suggesting suggest VBG cord-000238-om92cx5q 41 28 that that IN cord-000238-om92cx5q 41 29 RNA RNA NNP cord-000238-om92cx5q 41 30 viruses virus NNS cord-000238-om92cx5q 41 31 would would MD cord-000238-om92cx5q 41 32 be be VB cord-000238-om92cx5q 41 33 fruitful fruitful JJ cord-000238-om92cx5q 41 34 systems system NNS cord-000238-om92cx5q 41 35 to to TO cord-000238-om92cx5q 41 36 explore explore VB cord-000238-om92cx5q 41 37 how how WRB cord-000238-om92cx5q 41 38 genetic genetic JJ cord-000238-om92cx5q 41 39 robustness robustness NN cord-000238-om92cx5q 41 40 evolves evolve VBZ cord-000238-om92cx5q 41 41 . . . cord-000238-om92cx5q 42 1 In in IN cord-000238-om92cx5q 42 2 general general JJ cord-000238-om92cx5q 42 3 , , , cord-000238-om92cx5q 42 4 success success NN cord-000238-om92cx5q 42 5 in in IN cord-000238-om92cx5q 42 6 these these DT cord-000238-om92cx5q 42 7 systems system NNS cord-000238-om92cx5q 42 8 has have VBZ cord-000238-om92cx5q 42 9 come come VBN cord-000238-om92cx5q 42 10 either either CC cord-000238-om92cx5q 42 11 from from IN cord-000238-om92cx5q 42 12 manipulating manipulate VBG cord-000238-om92cx5q 42 13 ecological ecological JJ cord-000238-om92cx5q 42 14 conditions condition NNS cord-000238-om92cx5q 42 15 such such JJ cord-000238-om92cx5q 42 16 that that IN cord-000238-om92cx5q 42 17 robustness robustness NN cord-000238-om92cx5q 42 18 becomes become VBZ cord-000238-om92cx5q 42 19 less less RBR cord-000238-om92cx5q 42 20 important important JJ cord-000238-om92cx5q 42 21 and and CC cord-000238-om92cx5q 42 22 evolves evolve VBZ cord-000238-om92cx5q 42 23 to to TO cord-000238-om92cx5q 42 24 decrease decrease VB cord-000238-om92cx5q 42 25 , , , cord-000238-om92cx5q 42 26 or or CC cord-000238-om92cx5q 42 27 from from IN cord-000238-om92cx5q 42 28 manipulating manipulate VBG cord-000238-om92cx5q 42 29 competition competition NN cord-000238-om92cx5q 42 30 environments environment NNS cord-000238-om92cx5q 42 31 to to TO cord-000238-om92cx5q 42 32 examine examine VB cord-000238-om92cx5q 42 33 whether whether IN cord-000238-om92cx5q 42 34 elevated elevated JJ cord-000238-om92cx5q 42 35 mutation mutation NN cord-000238-om92cx5q 42 36 rates rate NNS cord-000238-om92cx5q 42 37 favor favor VBP cord-000238-om92cx5q 42 38 genetically genetically RB cord-000238-om92cx5q 42 39 robust robust JJ cord-000238-om92cx5q 42 40 populations population NNS cord-000238-om92cx5q 42 41 . . . cord-000238-om92cx5q 43 1 In in IN cord-000238-om92cx5q 43 2 both both DT cord-000238-om92cx5q 43 3 strategies strategy NNS cord-000238-om92cx5q 43 4 , , , cord-000238-om92cx5q 43 5 the the DT cord-000238-om92cx5q 43 6 ultimate ultimate JJ cord-000238-om92cx5q 43 7 goal goal NN cord-000238-om92cx5q 43 8 was be VBD cord-000238-om92cx5q 43 9 to to TO cord-000238-om92cx5q 43 10 manipulate manipulate VB cord-000238-om92cx5q 43 11 treatments treatment NNS cord-000238-om92cx5q 43 12 and and CC cord-000238-om92cx5q 43 13 confirm confirm VB cord-000238-om92cx5q 43 14 that that IN cord-000238-om92cx5q 43 15 certain certain JJ cord-000238-om92cx5q 43 16 test test NN cord-000238-om92cx5q 43 17 populations population NNS cord-000238-om92cx5q 43 18 better well RBR cord-000238-om92cx5q 43 19 maintained maintain VBD cord-000238-om92cx5q 43 20 a a DT cord-000238-om92cx5q 43 21 measurable measurable JJ cord-000238-om92cx5q 43 22 phenotype phenotype NN cord-000238-om92cx5q 43 23 in in IN cord-000238-om92cx5q 43 24 spite spite NN cord-000238-om92cx5q 43 25 of of IN cord-000238-om92cx5q 43 26 mutational mutational JJ cord-000238-om92cx5q 43 27 change change NN cord-000238-om92cx5q 43 28 , , , cord-000238-om92cx5q 43 29 and and CC cord-000238-om92cx5q 43 30 thus thus RB cord-000238-om92cx5q 43 31 were be VBD cord-000238-om92cx5q 43 32 relatively relatively RB cord-000238-om92cx5q 43 33 robust robust JJ cord-000238-om92cx5q 43 34 . . . cord-000238-om92cx5q 44 1 Theory theory NN cord-000238-om92cx5q 44 2 on on IN cord-000238-om92cx5q 44 3 adaptive adaptive JJ cord-000238-om92cx5q 44 4 genetic genetic JJ cord-000238-om92cx5q 44 5 robustness robustness NN cord-000238-om92cx5q 44 6 under under IN cord-000238-om92cx5q 44 7 elevated elevated JJ cord-000238-om92cx5q 44 8 mutation mutation NN cord-000238-om92cx5q 44 9 rate rate NN cord-000238-om92cx5q 44 10 generally generally RB cord-000238-om92cx5q 44 11 assumes assume VBZ cord-000238-om92cx5q 44 12 that that IN cord-000238-om92cx5q 44 13 phenotype phenotype NN cord-000238-om92cx5q 44 14 expression expression NN cord-000238-om92cx5q 44 15 results result VBZ cord-000238-om92cx5q 44 16 solely solely RB cord-000238-om92cx5q 44 17 from from IN cord-000238-om92cx5q 44 18 the the DT cord-000238-om92cx5q 44 19 underlying underlie VBG cord-000238-om92cx5q 44 20 genotype genotype NN cord-000238-om92cx5q 44 21 . . . cord-000238-om92cx5q 45 1 However however RB cord-000238-om92cx5q 45 2 , , , cord-000238-om92cx5q 45 3 viruses virus NNS cord-000238-om92cx5q 45 4 can can MD cord-000238-om92cx5q 45 5 employ employ VB cord-000238-om92cx5q 45 6 complementation complementation NN cord-000238-om92cx5q 45 7 , , , cord-000238-om92cx5q 45 8 a a DT cord-000238-om92cx5q 45 9 mechanism mechanism NN cord-000238-om92cx5q 45 10 whereby whereby WRB cord-000238-om92cx5q 45 11 low low JJ cord-000238-om92cx5q 45 12 - - HYPH cord-000238-om92cx5q 45 13 fitness fitness NN cord-000238-om92cx5q 45 14 genotypes genotype NNS cord-000238-om92cx5q 45 15 can can MD cord-000238-om92cx5q 45 16 use use VB cord-000238-om92cx5q 45 17 , , , cord-000238-om92cx5q 45 18 to to IN cord-000238-om92cx5q 45 19 their -PRON- PRP$ cord-000238-om92cx5q 45 20 advantage advantage NN cord-000238-om92cx5q 45 21 , , , cord-000238-om92cx5q 45 22 intracellular intracellular JJ cord-000238-om92cx5q 45 23 proteins protein NNS cord-000238-om92cx5q 45 24 made make VBN cord-000238-om92cx5q 45 25 by by IN cord-000238-om92cx5q 45 26 coinfecting coinfecte VBG cord-000238-om92cx5q 45 27 strains strain NNS cord-000238-om92cx5q 45 28 of of IN cord-000238-om92cx5q 45 29 high high JJ cord-000238-om92cx5q 45 30 fitness fitness NN cord-000238-om92cx5q 45 31 . . . cord-000238-om92cx5q 46 1 [ [ -LRB- cord-000238-om92cx5q 46 2 19 19 CD cord-000238-om92cx5q 46 3 ] ] -RRB- cord-000238-om92cx5q 46 4 [ [ -LRB- cord-000238-om92cx5q 46 5 20 20 CD cord-000238-om92cx5q 46 6 ] ] -RRB- cord-000238-om92cx5q 46 7 [ [ -LRB- cord-000238-om92cx5q 46 8 21 21 CD cord-000238-om92cx5q 46 9 ] ] -RRB- cord-000238-om92cx5q 46 10 Coinfection coinfection NN cord-000238-om92cx5q 46 11 combined combine VBN cord-000238-om92cx5q 46 12 with with IN cord-000238-om92cx5q 46 13 complementation complementation NN cord-000238-om92cx5q 46 14 can can MD cord-000238-om92cx5q 46 15 therefore therefore RB cord-000238-om92cx5q 46 16 provide provide VB cord-000238-om92cx5q 46 17 phenotypic phenotypic JJ cord-000238-om92cx5q 46 18 buffering buffering NN cord-000238-om92cx5q 46 19 in in IN cord-000238-om92cx5q 46 20 the the DT cord-000238-om92cx5q 46 21 event event NN cord-000238-om92cx5q 46 22 of of IN cord-000238-om92cx5q 46 23 genomic genomic JJ cord-000238-om92cx5q 46 24 mutations mutation NNS cord-000238-om92cx5q 46 25 , , , cord-000238-om92cx5q 46 26 similar similar JJ cord-000238-om92cx5q 46 27 to to IN cord-000238-om92cx5q 46 28 other other JJ cord-000238-om92cx5q 46 29 buffering buffering NN cord-000238-om92cx5q 46 30 mechanisms mechanism NNS cord-000238-om92cx5q 46 31 such such JJ cord-000238-om92cx5q 46 32 as as IN cord-000238-om92cx5q 46 33 gene gene NN cord-000238-om92cx5q 46 34 duplication duplication NN cord-000238-om92cx5q 46 35 and and CC cord-000238-om92cx5q 46 36 diploidy diploidy NN cord-000238-om92cx5q 46 37 that that WDT cord-000238-om92cx5q 46 38 might may MD cord-000238-om92cx5q 46 39 be be VB cord-000238-om92cx5q 46 40 positively positively RB cord-000238-om92cx5q 46 41 selected select VBN cord-000238-om92cx5q 46 42 because because IN cord-000238-om92cx5q 46 43 they -PRON- PRP cord-000238-om92cx5q 46 44 facilitate facilitate VBP cord-000238-om92cx5q 46 45 canalization canalization NN cord-000238-om92cx5q 46 46 in in IN cord-000238-om92cx5q 46 47 higher high JJR cord-000238-om92cx5q 46 48 organisms organism NNS cord-000238-om92cx5q 46 49 . . . cord-000238-om92cx5q 47 1 22 22 CD cord-000238-om92cx5q 47 2 , , , cord-000238-om92cx5q 47 3 23 23 CD cord-000238-om92cx5q 47 4 Complementation Complementation NNP cord-000238-om92cx5q 47 5 can can MD cord-000238-om92cx5q 47 6 buffer buffer VB cord-000238-om92cx5q 47 7 against against IN cord-000238-om92cx5q 47 8 negative negative JJ cord-000238-om92cx5q 47 9 fitness fitness NN cord-000238-om92cx5q 47 10 effects effect NNS cord-000238-om92cx5q 47 11 of of IN cord-000238-om92cx5q 47 12 deleterious deleterious JJ cord-000238-om92cx5q 47 13 alleles allele NNS cord-000238-om92cx5q 47 14 in in IN cord-000238-om92cx5q 47 15 coinfecting coinfecte VBG cord-000238-om92cx5q 47 16 populations population NNS cord-000238-om92cx5q 47 17 of of IN cord-000238-om92cx5q 47 18 viruses virus NNS cord-000238-om92cx5q 47 19 . . . cord-000238-om92cx5q 48 1 20 20 CD cord-000238-om92cx5q 49 1 This this DT cord-000238-om92cx5q 49 2 buffering buffering NN cord-000238-om92cx5q 49 3 effect effect NN cord-000238-om92cx5q 49 4 introduces introduce VBZ cord-000238-om92cx5q 49 5 an an DT cord-000238-om92cx5q 49 6 ecologically ecologically RB cord-000238-om92cx5q 49 7 determined determine VBN cord-000238-om92cx5q 49 8 community community NN cord-000238-om92cx5q 49 9 - - HYPH cord-000238-om92cx5q 49 10 level level NN cord-000238-om92cx5q 49 11 robustness robustness NN cord-000238-om92cx5q 49 12 which which WDT cord-000238-om92cx5q 49 13 renders render VBZ cord-000238-om92cx5q 49 14 their -PRON- PRP$ cord-000238-om92cx5q 49 15 individuallevel individuallevel NN cord-000238-om92cx5q 49 16 robustness robustness NN cord-000238-om92cx5q 49 17 less less RBR cord-000238-om92cx5q 49 18 necessary necessary JJ cord-000238-om92cx5q 49 19 . . . cord-000238-om92cx5q 50 1 This this DT cord-000238-om92cx5q 50 2 logic logic NN cord-000238-om92cx5q 50 3 infers infer VBZ cord-000238-om92cx5q 50 4 that that IN cord-000238-om92cx5q 50 5 the the DT cord-000238-om92cx5q 50 6 degree degree NN cord-000238-om92cx5q 50 7 of of IN cord-000238-om92cx5q 50 8 coinfection coinfection NN cord-000238-om92cx5q 50 9 - - HYPH cord-000238-om92cx5q 50 10 high high JJ cord-000238-om92cx5q 50 11 multiplicity multiplicity NN cord-000238-om92cx5q 50 12 of of IN cord-000238-om92cx5q 50 13 infection infection NN cord-000238-om92cx5q 50 14 ͑MOI ͑MOI NNP cord-000238-om92cx5q 50 15 ; ; : cord-000238-om92cx5q 50 16 ratio ratio NN cord-000238-om92cx5q 50 17 of of IN cord-000238-om92cx5q 50 18 viruses virus NNS cord-000238-om92cx5q 50 19 to to IN cord-000238-om92cx5q 50 20 cells͒ cells͒ VB cord-000238-om92cx5q 50 21 versus versus IN cord-000238-om92cx5q 50 22 low low JJ cord-000238-om92cx5q 50 23 MOI MOI NNP cord-000238-om92cx5q 50 24 - - , cord-000238-om92cx5q 50 25 should should MD cord-000238-om92cx5q 50 26 influence influence VB cord-000238-om92cx5q 50 27 evolution evolution NN cord-000238-om92cx5q 50 28 of of IN cord-000238-om92cx5q 50 29 robustness robustness NN cord-000238-om92cx5q 50 30 in in IN cord-000238-om92cx5q 50 31 virus virus NN cord-000238-om92cx5q 50 32 populations population NNS cord-000238-om92cx5q 50 33 . . . cord-000238-om92cx5q 51 1 14 14 CD cord-000238-om92cx5q 52 1 We -PRON- PRP cord-000238-om92cx5q 52 2 note note VBP cord-000238-om92cx5q 52 3 that that IN cord-000238-om92cx5q 52 4 many many JJ cord-000238-om92cx5q 52 5 other other JJ cord-000238-om92cx5q 52 6 phenomena phenomenon NNS cord-000238-om92cx5q 52 7 consequential consequential JJ cord-000238-om92cx5q 52 8 for for IN cord-000238-om92cx5q 52 9 virus virus NN cord-000238-om92cx5q 52 10 evolution evolution NN cord-000238-om92cx5q 52 11 can can MD cord-000238-om92cx5q 52 12 occur occur VB cord-000238-om92cx5q 52 13 as as IN cord-000238-om92cx5q 52 14 a a DT cord-000238-om92cx5q 52 15 result result NN cord-000238-om92cx5q 52 16 of of IN cord-000238-om92cx5q 52 17 coinfection coinfection NN cord-000238-om92cx5q 52 18 , , , cord-000238-om92cx5q 52 19 especially especially RB cord-000238-om92cx5q 52 20 genetic genetic JJ cord-000238-om92cx5q 52 21 exchange exchange NN cord-000238-om92cx5q 52 22 ͑recombination͒ ͑recombination͒ NFP cord-000238-om92cx5q 52 23 between between IN cord-000238-om92cx5q 52 24 viruses virus NNS cord-000238-om92cx5q 52 25 and and CC cord-000238-om92cx5q 52 26 selection selection NN cord-000238-om92cx5q 52 27 for for IN cord-000238-om92cx5q 52 28 virus virus NN cord-000238-om92cx5q 52 29 " " `` cord-000238-om92cx5q 52 30 cheaters cheater NNS cord-000238-om92cx5q 52 31 " " '' cord-000238-om92cx5q 52 32 such such JJ cord-000238-om92cx5q 52 33 as as IN cord-000238-om92cx5q 52 34 defective defective JJ cord-000238-om92cx5q 52 35 - - HYPH cord-000238-om92cx5q 52 36 interfering interfere VBG cord-000238-om92cx5q 52 37 particles particle NNS cord-000238-om92cx5q 52 38 . . . cord-000238-om92cx5q 53 1 24 24 CD cord-000238-om92cx5q 54 1 For for IN cord-000238-om92cx5q 54 2 brevity brevity NN cord-000238-om92cx5q 54 3 we -PRON- PRP cord-000238-om92cx5q 54 4 limit limit VBP cord-000238-om92cx5q 54 5 our -PRON- PRP$ cord-000238-om92cx5q 54 6 discussion discussion NN cord-000238-om92cx5q 54 7 to to IN cord-000238-om92cx5q 54 8 complementation complementation NN cord-000238-om92cx5q 54 9 that that WDT cord-000238-om92cx5q 54 10 occurs occur VBZ cord-000238-om92cx5q 54 11 during during IN cord-000238-om92cx5q 54 12 coinfection coinfection NN cord-000238-om92cx5q 54 13 and and CC cord-000238-om92cx5q 54 14 its -PRON- PRP$ cord-000238-om92cx5q 54 15 potential potential JJ cord-000238-om92cx5q 54 16 role role NN cord-000238-om92cx5q 54 17 in in IN cord-000238-om92cx5q 54 18 the the DT cord-000238-om92cx5q 54 19 evolution evolution NN cord-000238-om92cx5q 54 20 of of IN cord-000238-om92cx5q 54 21 virus virus NN cord-000238-om92cx5q 54 22 robustness robustness NN cord-000238-om92cx5q 54 23 . . . cord-000238-om92cx5q 55 1 The the DT cord-000238-om92cx5q 55 2 segmented segmented JJ cord-000238-om92cx5q 55 3 RNA RNA NNP cord-000238-om92cx5q 55 4 phage phage NN cord-000238-om92cx5q 55 5 6 6 CD cord-000238-om92cx5q 55 6 is be VBZ cord-000238-om92cx5q 55 7 typically typically RB cord-000238-om92cx5q 55 8 grown grow VBN cord-000238-om92cx5q 55 9 in in IN cord-000238-om92cx5q 55 10 the the DT cord-000238-om92cx5q 55 11 laboratory laboratory NN cord-000238-om92cx5q 55 12 on on IN cord-000238-om92cx5q 55 13 the the DT cord-000238-om92cx5q 55 14 plant plant NN cord-000238-om92cx5q 55 15 pathogenic pathogenic JJ cord-000238-om92cx5q 55 16 bacteria bacteria NNS cord-000238-om92cx5q 55 17 Pseudomonas Pseudomonas NNP cord-000238-om92cx5q 55 18 syringae syringae NN cord-000238-om92cx5q 55 19 pathovar pathovar NNP cord-000238-om92cx5q 55 20 phaseolicola phaseolicola NNP cord-000238-om92cx5q 55 21 . . . cord-000238-om92cx5q 56 1 To to TO cord-000238-om92cx5q 56 2 examine examine VB cord-000238-om92cx5q 56 3 whether whether IN cord-000238-om92cx5q 56 4 high high JJ cord-000238-om92cx5q 56 5 - - HYPH cord-000238-om92cx5q 56 6 MOI MOI NNP cord-000238-om92cx5q 56 7 populations population NNS cord-000238-om92cx5q 56 8 of of IN cord-000238-om92cx5q 56 9 phage phage NN cord-000238-om92cx5q 56 10 6 6 CD cord-000238-om92cx5q 56 11 will will MD cord-000238-om92cx5q 56 12 evolve evolve VB cord-000238-om92cx5q 56 13 decreased decrease VBN cord-000238-om92cx5q 56 14 genetic genetic JJ cord-000238-om92cx5q 56 15 robustness robustness NN cord-000238-om92cx5q 56 16 against against IN cord-000238-om92cx5q 56 17 mutations mutation NNS cord-000238-om92cx5q 56 18 , , , cord-000238-om92cx5q 56 19 virus virus NN cord-000238-om92cx5q 56 20 populations population NNS cord-000238-om92cx5q 56 21 were be VBD cord-000238-om92cx5q 56 22 first first RB cord-000238-om92cx5q 56 23 propagated propagate VBN cord-000238-om92cx5q 56 24 for for IN cord-000238-om92cx5q 56 25 300 300 CD cord-000238-om92cx5q 56 26 generations generation NNS cord-000238-om92cx5q 56 27 under under IN cord-000238-om92cx5q 56 28 high high JJ cord-000238-om92cx5q 56 29 versus versus IN cord-000238-om92cx5q 56 30 low low JJ cord-000238-om92cx5q 56 31 MOI MOI NNP cord-000238-om92cx5q 56 32 . . . cord-000238-om92cx5q 57 1 25 25 CD cord-000238-om92cx5q 57 2 , , , cord-000238-om92cx5q 57 3 14 14 CD cord-000238-om92cx5q 58 1 The the DT cord-000238-om92cx5q 58 2 expectation expectation NN cord-000238-om92cx5q 58 3 was be VBD cord-000238-om92cx5q 58 4 that that IN cord-000238-om92cx5q 58 5 high high JJ cord-000238-om92cx5q 58 6 - - HYPH cord-000238-om92cx5q 58 7 MOI MOI NNP cord-000238-om92cx5q 58 8 evolved evolve VBD cord-000238-om92cx5q 58 9 viruses virus NNS cord-000238-om92cx5q 58 10 would would MD cord-000238-om92cx5q 58 11 become become VB cord-000238-om92cx5q 58 12 more more RBR cord-000238-om92cx5q 58 13 brittle brittle JJ cord-000238-om92cx5q 58 14 , , , cord-000238-om92cx5q 58 15 in in IN cord-000238-om92cx5q 58 16 comparison comparison NN cord-000238-om92cx5q 58 17 to to IN cord-000238-om92cx5q 58 18 their -PRON- PRP$ cord-000238-om92cx5q 58 19 low low JJ cord-000238-om92cx5q 58 20 - - HYPH cord-000238-om92cx5q 58 21 MOI MOI NNP cord-000238-om92cx5q 58 22 evolved evolve VBD cord-000238-om92cx5q 58 23 counterparts counterpart NNS cord-000238-om92cx5q 58 24 . . . cord-000238-om92cx5q 59 1 To to TO cord-000238-om92cx5q 59 2 reveal reveal VB cord-000238-om92cx5q 59 3 this this DT cord-000238-om92cx5q 59 4 assumed assume VBN cord-000238-om92cx5q 59 5 outcome outcome NN cord-000238-om92cx5q 59 6 , , , cord-000238-om92cx5q 59 7 clones clone NNS cord-000238-om92cx5q 59 8 were be VBD cord-000238-om92cx5q 59 9 randomly randomly RB cord-000238-om92cx5q 59 10 chosen choose VBN cord-000238-om92cx5q 59 11 from from IN cord-000238-om92cx5q 59 12 the the DT cord-000238-om92cx5q 59 13 treatment treatment NN cord-000238-om92cx5q 59 14 populations population NNS cord-000238-om92cx5q 59 15 and and CC cord-000238-om92cx5q 59 16 used use VBD cord-000238-om92cx5q 59 17 to to TO cord-000238-om92cx5q 59 18 initiate initiate VB cord-000238-om92cx5q 59 19 lineages lineage NNS cord-000238-om92cx5q 59 20 subjected subject VBN cord-000238-om92cx5q 59 21 to to IN cord-000238-om92cx5q 59 22 mutation mutation NN cord-000238-om92cx5q 59 23 accumulation accumulation NN cord-000238-om92cx5q 59 24 via via IN cord-000238-om92cx5q 59 25 passage passage NN cord-000238-om92cx5q 59 26 through through IN cord-000238-om92cx5q 59 27 severe severe JJ cord-000238-om92cx5q 59 28 bottlenecks bottleneck NNS cord-000238-om92cx5q 59 29 ͑population ͑population SYM cord-000238-om92cx5q 59 30 size= size= NNS cord-000238-om92cx5q 59 31 1 1 CD cord-000238-om92cx5q 59 32 individual͒ individual͒ CD cord-000238-om92cx5q 59 33 ; ; : cord-000238-om92cx5q 59 34 this this DT cord-000238-om92cx5q 59 35 method method NN cord-000238-om92cx5q 59 36 allows allow VBZ cord-000238-om92cx5q 59 37 genetic genetic JJ cord-000238-om92cx5q 59 38 drift drift NN cord-000238-om92cx5q 59 39 to to TO cord-000238-om92cx5q 59 40 overwhelm overwhelm VB cord-000238-om92cx5q 59 41 selection selection NN cord-000238-om92cx5q 59 42 , , , cord-000238-om92cx5q 59 43 such such JJ cord-000238-om92cx5q 59 44 that that IN cord-000238-om92cx5q 59 45 virus virus NN cord-000238-om92cx5q 59 46 lineages lineage NNS cord-000238-om92cx5q 59 47 amass amass VBP cord-000238-om92cx5q 59 48 mutations mutation NNS cord-000238-om92cx5q 59 49 that that WDT cord-000238-om92cx5q 59 50 are be VBP cord-000238-om92cx5q 59 51 on on IN cord-000238-om92cx5q 59 52 average average JJ cord-000238-om92cx5q 59 53 deleterious deleterious JJ cord-000238-om92cx5q 59 54 . . . cord-000238-om92cx5q 60 1 26 26 CD cord-000238-om92cx5q 61 1 The the DT cord-000238-om92cx5q 61 2 mean mean JJ cord-000238-om92cx5q 61 3 magnitude magnitude NN cord-000238-om92cx5q 61 4 and and CC cord-000238-om92cx5q 61 5 FIG fig NN cord-000238-om92cx5q 61 6 . . . cord-000238-om92cx5q 62 1 1 1 LS cord-000238-om92cx5q 62 2 . . . cord-000238-om92cx5q 63 1 Genotype genotype NN cord-000238-om92cx5q 63 2 and and CC cord-000238-om92cx5q 63 3 phenotype phenotype NN cord-000238-om92cx5q 63 4 spaces space NNS cord-000238-om92cx5q 63 5 are be VBP cord-000238-om92cx5q 63 6 represented represent VBN cord-000238-om92cx5q 63 7 schematically schematically RB cord-000238-om92cx5q 63 8 in in IN cord-000238-om92cx5q 63 9 two two CD cord-000238-om92cx5q 63 10 dimensions dimension NNS cord-000238-om92cx5q 63 11 . . . cord-000238-om92cx5q 64 1 A a DT cord-000238-om92cx5q 64 2 brittle brittle JJ cord-000238-om92cx5q 64 3 organism organism NN cord-000238-om92cx5q 64 4 produces produce VBZ cord-000238-om92cx5q 64 5 a a DT cord-000238-om92cx5q 64 6 phenotype phenotype NN cord-000238-om92cx5q 64 7 that that WDT cord-000238-om92cx5q 64 8 is be VBZ cord-000238-om92cx5q 64 9 a a DT cord-000238-om92cx5q 64 10 reflection reflection NN cord-000238-om92cx5q 64 11 of of IN cord-000238-om92cx5q 64 12 the the DT cord-000238-om92cx5q 64 13 underlying underlying JJ cord-000238-om92cx5q 64 14 genotype genotype NN cord-000238-om92cx5q 64 15 , , , cord-000238-om92cx5q 64 16 whereas whereas IN cord-000238-om92cx5q 64 17 a a DT cord-000238-om92cx5q 64 18 robust robust JJ cord-000238-om92cx5q 64 19 organism organism NN cord-000238-om92cx5q 64 20 produces produce VBZ cord-000238-om92cx5q 64 21 a a DT cord-000238-om92cx5q 64 22 constant constant JJ cord-000238-om92cx5q 64 23 phenotype phenotype NN cord-000238-om92cx5q 64 24 regardless regardless RB cord-000238-om92cx5q 64 25 of of IN cord-000238-om92cx5q 64 26 the the DT cord-000238-om92cx5q 64 27 underlying underlying JJ cord-000238-om92cx5q 64 28 genotype genotype NN cord-000238-om92cx5q 64 29 . . . cord-000238-om92cx5q 65 1 ͓Reprinted ͓reprinte VBN cord-000238-om92cx5q 65 2 with with IN cord-000238-om92cx5q 65 3 permission permission NN cord-000238-om92cx5q 65 4 from from IN cord-000238-om92cx5q 65 5 M. M. NNP cord-000238-om92cx5q 65 6 Félix Félix NNP cord-000238-om92cx5q 65 7 and and CC cord-000238-om92cx5q 65 8 A. A. NNP cord-000238-om92cx5q 65 9 Wagner Wagner NNP cord-000238-om92cx5q 65 10 , , , cord-000238-om92cx5q 65 11 Heredity Heredity NNP cord-000238-om92cx5q 65 12 100 100 CD cord-000238-om92cx5q 65 13 , , , cord-000238-om92cx5q 65 14 132 132 CD cord-000238-om92cx5q 65 15 ͑2008͒. ͑2008͒. . cord-000238-om92cx5q 66 1 Copyright copyright NN cord-000238-om92cx5q 66 2 © © NNP cord-000238-om92cx5q 66 3 2008 2008 CD cord-000238-om92cx5q 66 4 Nature Nature NNP cord-000238-om92cx5q 66 5 Publishing Publishing NNP cord-000238-om92cx5q 66 6 Group.͔ Group.͔ NNP cord-000238-om92cx5q 66 7 variance variance NN cord-000238-om92cx5q 66 8 in in IN cord-000238-om92cx5q 66 9 fitness fitness NN cord-000238-om92cx5q 66 10 changes change NNS cord-000238-om92cx5q 66 11 that that WDT cord-000238-om92cx5q 66 12 occurred occur VBD cord-000238-om92cx5q 66 13 because because IN cord-000238-om92cx5q 66 14 of of IN cord-000238-om92cx5q 66 15 bottlenecking bottleneck VBG cord-000238-om92cx5q 66 16 were be VBD cord-000238-om92cx5q 66 17 statistically statistically RB cord-000238-om92cx5q 66 18 compared compare VBN cord-000238-om92cx5q 66 19 between between IN cord-000238-om92cx5q 66 20 lineages lineage NNS cord-000238-om92cx5q 66 21 founded found VBN cord-000238-om92cx5q 66 22 by by IN cord-000238-om92cx5q 66 23 presumed presume VBN cord-000238-om92cx5q 66 24 robust robust JJ cord-000238-om92cx5q 66 25 ͑low ͑low NNP cord-000238-om92cx5q 66 26 - - : cord-000238-om92cx5q 66 27 MOI͒ moi͒ JJ cord-000238-om92cx5q 66 28 and and CC cord-000238-om92cx5q 66 29 brittle brittle JJ cord-000238-om92cx5q 66 30 ͑high ͑high NN cord-000238-om92cx5q 66 31 - - : cord-000238-om92cx5q 66 32 MOI͒ moi͒ JJ cord-000238-om92cx5q 66 33 viruses virus NNS cord-000238-om92cx5q 66 34 . . . cord-000238-om92cx5q 67 1 Results result NNS cord-000238-om92cx5q 67 2 from from IN cord-000238-om92cx5q 67 3 the the DT cord-000238-om92cx5q 67 4 mutation mutation NN cord-000238-om92cx5q 67 5 accumulation accumulation NN cord-000238-om92cx5q 67 6 analysis analysis NN cord-000238-om92cx5q 67 7 supported support VBD cord-000238-om92cx5q 67 8 the the DT cord-000238-om92cx5q 67 9 hypothesis hypothesis NN cord-000238-om92cx5q 67 10 that that IN cord-000238-om92cx5q 67 11 viruses virus NNS cord-000238-om92cx5q 67 12 historically historically RB cord-000238-om92cx5q 67 13 evolved evolve VBN cord-000238-om92cx5q 67 14 under under IN cord-000238-om92cx5q 67 15 frequent frequent JJ cord-000238-om92cx5q 67 16 coinfection coinfection NN cord-000238-om92cx5q 67 17 became become VBD cord-000238-om92cx5q 67 18 relatively relatively RB cord-000238-om92cx5q 67 19 less less RBR cord-000238-om92cx5q 67 20 genetically genetically RB cord-000238-om92cx5q 67 21 robust robust JJ cord-000238-om92cx5q 67 22 than than IN cord-000238-om92cx5q 67 23 those those DT cord-000238-om92cx5q 67 24 evolved evolve VBN cord-000238-om92cx5q 67 25 under under IN cord-000238-om92cx5q 67 26 rare rare JJ cord-000238-om92cx5q 67 27 coinfection coinfection NN cord-000238-om92cx5q 67 28 . . . cord-000238-om92cx5q 68 1 14 14 CD cord-000238-om92cx5q 69 1 One one CD cord-000238-om92cx5q 69 2 alternative alternative JJ cord-000238-om92cx5q 69 3 explanation explanation NN cord-000238-om92cx5q 69 4 for for IN cord-000238-om92cx5q 69 5 the the DT cord-000238-om92cx5q 69 6 observations observation NNS cord-000238-om92cx5q 69 7 would would MD cord-000238-om92cx5q 69 8 be be VB cord-000238-om92cx5q 69 9 a a DT cord-000238-om92cx5q 69 10 higher high JJR cord-000238-om92cx5q 69 11 mutation mutation NN cord-000238-om92cx5q 69 12 rate rate NN cord-000238-om92cx5q 69 13 in in IN cord-000238-om92cx5q 69 14 the the DT cord-000238-om92cx5q 69 15 viruses virus NNS cord-000238-om92cx5q 69 16 evolved evolve VBN cord-000238-om92cx5q 69 17 at at IN cord-000238-om92cx5q 69 18 high high JJ cord-000238-om92cx5q 69 19 MOI MOI NNP cord-000238-om92cx5q 69 20 , , , cord-000238-om92cx5q 69 21 causing cause VBG cord-000238-om92cx5q 69 22 them -PRON- PRP cord-000238-om92cx5q 69 23 to to TO cord-000238-om92cx5q 69 24 experience experience VB cord-000238-om92cx5q 69 25 a a DT cord-000238-om92cx5q 69 26 greater great JJR cord-000238-om92cx5q 69 27 number number NN cord-000238-om92cx5q 69 28 of of IN cord-000238-om92cx5q 69 29 fixed fix VBN cord-000238-om92cx5q 69 30 mutations mutation NNS cord-000238-om92cx5q 69 31 ͑and ͑and . cord-000238-om92cx5q 70 1 hence hence RB cord-000238-om92cx5q 70 2 , , , cord-000238-om92cx5q 70 3 greater great JJR cord-000238-om92cx5q 70 4 fitness fitness NN cord-000238-om92cx5q 70 5 loss͒ loss͒ JJ cord-000238-om92cx5q 70 6 during during IN cord-000238-om92cx5q 70 7 the the DT cord-000238-om92cx5q 70 8 mutation mutation NN cord-000238-om92cx5q 70 9 accumulation accumulation NN cord-000238-om92cx5q 70 10 ; ; : cord-000238-om92cx5q 70 11 however however RB cord-000238-om92cx5q 70 12 , , , cord-000238-om92cx5q 70 13 no no DT cord-000238-om92cx5q 70 14 evidence evidence NN cord-000238-om92cx5q 70 15 suggests suggest VBZ cord-000238-om92cx5q 70 16 that that IN cord-000238-om92cx5q 70 17 these these DT cord-000238-om92cx5q 70 18 viruses virus NNS cord-000238-om92cx5q 70 19 mutate mutate VBP cord-000238-om92cx5q 70 20 at at IN cord-000238-om92cx5q 70 21 rates rate NNS cord-000238-om92cx5q 70 22 higher high JJR cord-000238-om92cx5q 70 23 than than IN cord-000238-om92cx5q 70 24 their -PRON- PRP$ cord-000238-om92cx5q 70 25 counterparts counterpart NNS cord-000238-om92cx5q 70 26 evolved evolve VBD cord-000238-om92cx5q 70 27 at at IN cord-000238-om92cx5q 70 28 low low JJ cord-000238-om92cx5q 70 29 MOI MOI NNP cord-000238-om92cx5q 70 30 . . . cord-000238-om92cx5q 71 1 14 14 CD cord-000238-om92cx5q 71 2 , , , cord-000238-om92cx5q 71 3 15 15 CD cord-000238-om92cx5q 72 1 Thus thus RB cord-000238-om92cx5q 72 2 , , , cord-000238-om92cx5q 72 3 the the DT cord-000238-om92cx5q 72 4 study study NN cord-000238-om92cx5q 72 5 provided provide VBD cord-000238-om92cx5q 72 6 the the DT cord-000238-om92cx5q 72 7 first first JJ cord-000238-om92cx5q 72 8 evidence evidence NN cord-000238-om92cx5q 72 9 that that IN cord-000238-om92cx5q 72 10 genetic genetic JJ cord-000238-om92cx5q 72 11 robustness robustness NN cord-000238-om92cx5q 72 12 could could MD cord-000238-om92cx5q 72 13 evolve evolve VB cord-000238-om92cx5q 72 14 to to TO cord-000238-om92cx5q 72 15 change change VB cord-000238-om92cx5q 72 16 in in IN cord-000238-om92cx5q 72 17 biological biological JJ cord-000238-om92cx5q 72 18 populations population NNS cord-000238-om92cx5q 72 19 . . . cord-000238-om92cx5q 73 1 Other other JJ cord-000238-om92cx5q 73 2 experimental experimental JJ cord-000238-om92cx5q 73 3 studies study NNS cord-000238-om92cx5q 73 4 have have VBP cord-000238-om92cx5q 73 5 used use VBN cord-000238-om92cx5q 73 6 RNA RNA NNP cord-000238-om92cx5q 73 7 viruses virus NNS cord-000238-om92cx5q 73 8 or or CC cord-000238-om92cx5q 73 9 viroids viroid NNS cord-000238-om92cx5q 73 10 ͑RNA ͑RNA , cord-000238-om92cx5q 73 11 viruslike viruslike JJ cord-000238-om92cx5q 73 12 plant plant NN cord-000238-om92cx5q 73 13 pathogens pathogen NNS cord-000238-om92cx5q 73 14 that that WDT cord-000238-om92cx5q 73 15 lack lack VBP cord-000238-om92cx5q 73 16 proteincoding proteincode VBG cord-000238-om92cx5q 73 17 genes͒ genes͒ NN cord-000238-om92cx5q 73 18 as as IN cord-000238-om92cx5q 73 19 models model NNS cord-000238-om92cx5q 73 20 to to TO cord-000238-om92cx5q 73 21 study study VB cord-000238-om92cx5q 73 22 whether whether IN cord-000238-om92cx5q 73 23 elevated elevated JJ cord-000238-om92cx5q 73 24 mutation mutation NN cord-000238-om92cx5q 73 25 rates rate NNS cord-000238-om92cx5q 73 26 favor favor VBP cord-000238-om92cx5q 73 27 robust robust JJ cord-000238-om92cx5q 73 28 genotypes genotype NNS cord-000238-om92cx5q 73 29 . . . cord-000238-om92cx5q 74 1 One one CD cord-000238-om92cx5q 74 2 study study NN cord-000238-om92cx5q 74 3 examined examine VBD cord-000238-om92cx5q 74 4 two two CD cord-000238-om92cx5q 74 5 species specie NNS cord-000238-om92cx5q 74 6 of of IN cord-000238-om92cx5q 74 7 viroids viroid NNS cord-000238-om92cx5q 74 8 that that WDT cord-000238-om92cx5q 74 9 differed differ VBD cord-000238-om92cx5q 74 10 in in IN cord-000238-om92cx5q 74 11 robustness robustness NN cord-000238-om92cx5q 74 12 . . . cord-000238-om92cx5q 75 1 13 13 CD cord-000238-om92cx5q 76 1 The the DT cord-000238-om92cx5q 76 2 robust robust JJ cord-000238-om92cx5q 76 3 viroid viroid JJ cord-000238-om92cx5q 76 4 species specie NNS cord-000238-om92cx5q 76 5 had have VBD cord-000238-om92cx5q 76 6 a a DT cord-000238-om92cx5q 76 7 low low JJ cord-000238-om92cx5q 76 8 reproductive reproductive JJ cord-000238-om92cx5q 76 9 capacity capacity NN cord-000238-om92cx5q 76 10 in in IN cord-000238-om92cx5q 76 11 plants plant NNS cord-000238-om92cx5q 76 12 but but CC cord-000238-om92cx5q 76 13 a a DT cord-000238-om92cx5q 76 14 large large JJ cord-000238-om92cx5q 76 15 neutral neutral JJ cord-000238-om92cx5q 76 16 neighborhood neighborhood NN cord-000238-om92cx5q 76 17 of of IN cord-000238-om92cx5q 76 18 mutations mutation NNS cord-000238-om92cx5q 76 19 ͑fraction ͑fraction NN cord-000238-om92cx5q 76 20 of of IN cord-000238-om92cx5q 76 21 one one CD cord-000238-om92cx5q 76 22 - - HYPH cord-000238-om92cx5q 76 23 error error NN cord-000238-om92cx5q 76 24 mutations mutation NNS cord-000238-om92cx5q 76 25 that that WDT cord-000238-om92cx5q 76 26 do do VBP cord-000238-om92cx5q 76 27 not not RB cord-000238-om92cx5q 76 28 change change VB cord-000238-om92cx5q 76 29 minimum minimum JJ cord-000238-om92cx5q 76 30 free free JJ cord-000238-om92cx5q 76 31 energy energy NN cord-000238-om92cx5q 76 32 RNAsecondary RNAsecondary NNP cord-000238-om92cx5q 76 33 structure͒ structure͒ NNP cord-000238-om92cx5q 76 34 , , , cord-000238-om92cx5q 76 35 whereas whereas IN cord-000238-om92cx5q 76 36 the the DT cord-000238-om92cx5q 76 37 brittle brittle JJ cord-000238-om92cx5q 76 38 viroid viroid NN cord-000238-om92cx5q 76 39 had have VBD cord-000238-om92cx5q 76 40 the the DT cord-000238-om92cx5q 76 41 opposite opposite JJ cord-000238-om92cx5q 76 42 combination combination NN cord-000238-om92cx5q 76 43 of of IN cord-000238-om92cx5q 76 44 traits trait NNS cord-000238-om92cx5q 76 45 . . . cord-000238-om92cx5q 77 1 It -PRON- PRP cord-000238-om92cx5q 77 2 was be VBD cord-000238-om92cx5q 77 3 hypothesized hypothesize VBN cord-000238-om92cx5q 77 4 that that IN cord-000238-om92cx5q 77 5 brittle brittle JJ cord-000238-om92cx5q 77 6 viroids viroid NNS cord-000238-om92cx5q 77 7 should should MD cord-000238-om92cx5q 77 8 outgrow outgrow VB cord-000238-om92cx5q 77 9 robust robust JJ cord-000238-om92cx5q 77 10 viroids viroid NNS cord-000238-om92cx5q 77 11 when when WRB cord-000238-om92cx5q 77 12 coinfecting coinfecte VBG cord-000238-om92cx5q 77 13 plants plant NNS cord-000238-om92cx5q 77 14 under under IN cord-000238-om92cx5q 77 15 ordinary ordinary JJ cord-000238-om92cx5q 77 16 conditions condition NNS cord-000238-om92cx5q 77 17 , , , cord-000238-om92cx5q 77 18 but but CC cord-000238-om92cx5q 77 19 the the DT cord-000238-om92cx5q 77 20 robust robust JJ cord-000238-om92cx5q 77 21 viroids viroid NNS cord-000238-om92cx5q 77 22 should should MD cord-000238-om92cx5q 77 23 be be VB cord-000238-om92cx5q 77 24 favored favor VBN cord-000238-om92cx5q 77 25 in in IN cord-000238-om92cx5q 77 26 the the DT cord-000238-om92cx5q 77 27 presence presence NN cord-000238-om92cx5q 77 28 of of IN cord-000238-om92cx5q 77 29 a a DT cord-000238-om92cx5q 77 30 mutagen mutagen NN cord-000238-om92cx5q 77 31 because because IN cord-000238-om92cx5q 77 32 they -PRON- PRP cord-000238-om92cx5q 77 33 better well RBR cord-000238-om92cx5q 77 34 maintained maintain VBD cord-000238-om92cx5q 77 35 phenotype phenotype NN cord-000238-om92cx5q 77 36 ͑proper ͑proper . cord-000238-om92cx5q 78 1 structure͒ structure͒ VBN cord-000238-om92cx5q 78 2 despite despite IN cord-000238-om92cx5q 78 3 mutational mutational JJ cord-000238-om92cx5q 78 4 input input NN cord-000238-om92cx5q 78 5 . . . cord-000238-om92cx5q 79 1 As as IN cord-000238-om92cx5q 79 2 predicted predict VBN cord-000238-om92cx5q 79 3 , , , cord-000238-om92cx5q 79 4 under under IN cord-000238-om92cx5q 79 5 standard standard JJ cord-000238-om92cx5q 79 6 growth growth NN cord-000238-om92cx5q 79 7 conditions condition NNS cord-000238-om92cx5q 79 8 in in IN cord-000238-om92cx5q 79 9 host host NN cord-000238-om92cx5q 79 10 plants plant NNS cord-000238-om92cx5q 79 11 , , , cord-000238-om92cx5q 79 12 results result NNS cord-000238-om92cx5q 79 13 showed show VBD cord-000238-om92cx5q 79 14 that that IN cord-000238-om92cx5q 79 15 the the DT cord-000238-om92cx5q 79 16 brittle brittle JJ cord-000238-om92cx5q 79 17 viroid viroid NN cord-000238-om92cx5q 79 18 was be VBD cord-000238-om92cx5q 79 19 selectively selectively RB cord-000238-om92cx5q 79 20 favored favor VBN cord-000238-om92cx5q 79 21 . . . cord-000238-om92cx5q 80 1 In in IN cord-000238-om92cx5q 80 2 contrast contrast NN cord-000238-om92cx5q 80 3 , , , cord-000238-om92cx5q 80 4 when when WRB cord-000238-om92cx5q 80 5 infected infect VBN cord-000238-om92cx5q 80 6 plants plant NNS cord-000238-om92cx5q 80 7 were be VBD cord-000238-om92cx5q 80 8 subjected subject VBN cord-000238-om92cx5q 80 9 to to IN cord-000238-om92cx5q 80 10 irradiation irradiation NN cord-000238-om92cx5q 80 11 by by IN cord-000238-om92cx5q 80 12 ultraviolet ultraviolet NN cord-000238-om92cx5q 80 13 C c NN cord-000238-om92cx5q 80 14 ͑UVC ͑uvc NN cord-000238-om92cx5q 80 15 ; ; : cord-000238-om92cx5q 80 16 short short JJ cord-000238-om92cx5q 80 17 wave wave NN cord-000238-om92cx5q 80 18 UV uv NN cord-000238-om92cx5q 80 19 light light NN cord-000238-om92cx5q 80 20 of of IN cord-000238-om92cx5q 80 21 wavelength wavelength NN cord-000238-om92cx5q 80 22 280 280 CD cord-000238-om92cx5q 80 23 - - HYPH cord-000238-om92cx5q 80 24 100 100 CD cord-000238-om92cx5q 80 25 nm͒ nm͒ NNP cord-000238-om92cx5q 80 26 , , , cord-000238-om92cx5q 80 27 this this DT cord-000238-om92cx5q 80 28 known know VBN cord-000238-om92cx5q 80 29 viroid viroid JJ cord-000238-om92cx5q 80 30 mutagen mutagen NN cord-000238-om92cx5q 80 31 caused cause VBD cord-000238-om92cx5q 80 32 the the DT cord-000238-om92cx5q 80 33 robust robust JJ cord-000238-om92cx5q 80 34 viroid viroid NN cord-000238-om92cx5q 80 35 to to TO cord-000238-om92cx5q 80 36 be be VB cord-000238-om92cx5q 80 37 favored favor VBN cord-000238-om92cx5q 80 38 in in IN cord-000238-om92cx5q 80 39 competition competition NN cord-000238-om92cx5q 80 40 , , , cord-000238-om92cx5q 80 41 because because IN cord-000238-om92cx5q 80 42 it -PRON- PRP cord-000238-om92cx5q 80 43 better well RBR cord-000238-om92cx5q 80 44 withstood withstand VBD cord-000238-om92cx5q 80 45 growth growth NN cord-000238-om92cx5q 80 46 despite despite IN cord-000238-om92cx5q 80 47 mutation mutation NN cord-000238-om92cx5q 80 48 . . . cord-000238-om92cx5q 81 1 13 13 CD cord-000238-om92cx5q 82 1 Thus thus RB cord-000238-om92cx5q 82 2 , , , cord-000238-om92cx5q 82 3 this this DT cord-000238-om92cx5q 82 4 empirical empirical JJ cord-000238-om92cx5q 82 5 outcome outcome NN cord-000238-om92cx5q 82 6 in in IN cord-000238-om92cx5q 82 7 biological biological JJ cord-000238-om92cx5q 82 8 populations population NNS cord-000238-om92cx5q 82 9 was be VBD cord-000238-om92cx5q 82 10 consistent consistent JJ cord-000238-om92cx5q 82 11 with with IN cord-000238-om92cx5q 82 12 the the DT cord-000238-om92cx5q 82 13 earlier early JJR cord-000238-om92cx5q 82 14 findings finding NNS cord-000238-om92cx5q 82 15 seen see VBN cord-000238-om92cx5q 82 16 in in IN cord-000238-om92cx5q 82 17 artificial artificial JJ cord-000238-om92cx5q 82 18 - - HYPH cord-000238-om92cx5q 82 19 life life NN cord-000238-om92cx5q 82 20 studies study NNS cord-000238-om92cx5q 82 21 . . . cord-000238-om92cx5q 83 1 9 9 CD cord-000238-om92cx5q 84 1 A a DT cord-000238-om92cx5q 84 2 second second JJ cord-000238-om92cx5q 84 3 study study NN cord-000238-om92cx5q 84 4 used use VBD cord-000238-om92cx5q 84 5 an an DT cord-000238-om92cx5q 84 6 RNA RNA NNP cord-000238-om92cx5q 84 7 virus virus NN cord-000238-om92cx5q 84 8 of of IN cord-000238-om92cx5q 84 9 eukaryotes eukaryote NNS cord-000238-om92cx5q 84 10 and and CC cord-000238-om92cx5q 84 11 two two CD cord-000238-om92cx5q 84 12 different different JJ cord-000238-om92cx5q 84 13 mutagens mutagen NNS cord-000238-om92cx5q 84 14 , , , cord-000238-om92cx5q 84 15 but but CC cord-000238-om92cx5q 84 16 found find VBD cord-000238-om92cx5q 84 17 very very RB cord-000238-om92cx5q 84 18 similar similar JJ cord-000238-om92cx5q 84 19 results result NNS cord-000238-om92cx5q 84 20 to to IN cord-000238-om92cx5q 84 21 those those DT cord-000238-om92cx5q 84 22 described describe VBN cord-000238-om92cx5q 84 23 above above RB cord-000238-om92cx5q 84 24 . . . cord-000238-om92cx5q 85 1 27 27 CD cord-000238-om92cx5q 86 1 Vesicular vesicular JJ cord-000238-om92cx5q 86 2 stomatitis stomatitis NN cord-000238-om92cx5q 86 3 virus virus NN cord-000238-om92cx5q 87 1 ͑VSV͒ ͑VSV͒ NNP cord-000238-om92cx5q 87 2 is be VBZ cord-000238-om92cx5q 87 3 an an DT cord-000238-om92cx5q 87 4 ssRNA ssrna NN cord-000238-om92cx5q 87 5 virus virus NN cord-000238-om92cx5q 87 6 that that WDT cord-000238-om92cx5q 87 7 is be VBZ cord-000238-om92cx5q 87 8 vector vector NN cord-000238-om92cx5q 87 9 - - HYPH cord-000238-om92cx5q 87 10 transmitted transmit VBN cord-000238-om92cx5q 87 11 by by IN cord-000238-om92cx5q 87 12 some some DT cord-000238-om92cx5q 87 13 insects insect NNS cord-000238-om92cx5q 87 14 and and CC cord-000238-om92cx5q 87 15 causes cause VBZ cord-000238-om92cx5q 87 16 disease disease NN cord-000238-om92cx5q 87 17 in in IN cord-000238-om92cx5q 87 18 certain certain JJ cord-000238-om92cx5q 87 19 mammal mammal NN cord-000238-om92cx5q 87 20 species specie NNS cord-000238-om92cx5q 87 21 . . . cord-000238-om92cx5q 88 1 28 28 CD cord-000238-om92cx5q 88 2 , , , cord-000238-om92cx5q 88 3 29 29 CD cord-000238-om92cx5q 88 4 Two two CD cord-000238-om92cx5q 88 5 diverged diverge VBN cord-000238-om92cx5q 88 6 populations population NNS cord-000238-om92cx5q 88 7 of of IN cord-000238-om92cx5q 88 8 VSV VSV NNP cord-000238-om92cx5q 88 9 were be VBD cord-000238-om92cx5q 88 10 characterized characterize VBN cord-000238-om92cx5q 88 11 for for IN cord-000238-om92cx5q 88 12 reproductive reproductive JJ cord-000238-om92cx5q 88 13 growth growth NN cord-000238-om92cx5q 88 14 on on IN cord-000238-om92cx5q 88 15 tissue tissue NN cord-000238-om92cx5q 88 16 culture culture NN cord-000238-om92cx5q 88 17 cells cell NNS cord-000238-om92cx5q 88 18 , , , cord-000238-om92cx5q 88 19 and and CC cord-000238-om92cx5q 88 20 for for IN cord-000238-om92cx5q 88 21 within within IN cord-000238-om92cx5q 88 22 - - HYPH cord-000238-om92cx5q 88 23 population population NN cord-000238-om92cx5q 88 24 variance variance NN cord-000238-om92cx5q 88 25 among among IN cord-000238-om92cx5q 88 26 clones clone NNS cord-000238-om92cx5q 88 27 for for IN cord-000238-om92cx5q 88 28 this this DT cord-000238-om92cx5q 88 29 phenotype phenotype NN cord-000238-om92cx5q 88 30 ; ; : cord-000238-om92cx5q 88 31 this this DT cord-000238-om92cx5q 88 32 effort effort NN cord-000238-om92cx5q 88 33 revealed reveal VBD cord-000238-om92cx5q 88 34 that that IN cord-000238-om92cx5q 88 35 one one CD cord-000238-om92cx5q 88 36 population population NN cord-000238-om92cx5q 88 37 was be VBD cord-000238-om92cx5q 88 38 slow slow RB cord-000238-om92cx5q 88 39 - - HYPH cord-000238-om92cx5q 88 40 growing grow VBG cord-000238-om92cx5q 88 41 but but CC cord-000238-om92cx5q 88 42 relatively relatively RB cord-000238-om92cx5q 88 43 less less RBR cord-000238-om92cx5q 88 44 variable variable JJ cord-000238-om92cx5q 88 45 in in IN cord-000238-om92cx5q 88 46 clone clone NN cord-000238-om92cx5q 88 47 phenotypes phenotype NNS cord-000238-om92cx5q 88 48 ͑robust͒ ͑robust͒ . cord-000238-om92cx5q 88 49 and and CC cord-000238-om92cx5q 88 50 the the DT cord-000238-om92cx5q 88 51 other other JJ cord-000238-om92cx5q 88 52 had have VBD cord-000238-om92cx5q 88 53 the the DT cord-000238-om92cx5q 88 54 opposite opposite JJ cord-000238-om92cx5q 88 55 characteristics characteristic NNS cord-000238-om92cx5q 88 56 ͑brittle͒. ͑brittle͒. ADD cord-000238-om92cx5q 88 57 27 27 CD cord-000238-om92cx5q 89 1 Whereas whereas IN cord-000238-om92cx5q 89 2 standard standard JJ cord-000238-om92cx5q 89 3 growth growth NN cord-000238-om92cx5q 89 4 conditions condition NNS cord-000238-om92cx5q 89 5 allowed allow VBD cord-000238-om92cx5q 89 6 the the DT cord-000238-om92cx5q 89 7 faster fast RBR cord-000238-om92cx5q 89 8 replicating replicate VBG cord-000238-om92cx5q 89 9 brittle brittle JJ cord-000238-om92cx5q 89 10 virus virus NN cord-000238-om92cx5q 89 11 population population NN cord-000238-om92cx5q 89 12 to to TO cord-000238-om92cx5q 89 13 outcompete outcompete VB cord-000238-om92cx5q 89 14 the the DT cord-000238-om92cx5q 89 15 slower slow JJR cord-000238-om92cx5q 89 16 replicating replicate VBG cord-000238-om92cx5q 89 17 robust robust JJ cord-000238-om92cx5q 89 18 population population NN cord-000238-om92cx5q 89 19 , , , cord-000238-om92cx5q 89 20 exposure exposure NN cord-000238-om92cx5q 89 21 to to IN cord-000238-om92cx5q 89 22 either either DT cord-000238-om92cx5q 89 23 of of IN cord-000238-om92cx5q 89 24 two two CD cord-000238-om92cx5q 89 25 mutagens mutagen NNS cord-000238-om92cx5q 89 26 favored favor VBD cord-000238-om92cx5q 89 27 the the DT cord-000238-om92cx5q 89 28 robust robust JJ cord-000238-om92cx5q 89 29 variant variant NN cord-000238-om92cx5q 89 30 . . . cord-000238-om92cx5q 90 1 These these DT cord-000238-om92cx5q 90 2 results result NNS cord-000238-om92cx5q 90 3 echoed echo VBD cord-000238-om92cx5q 90 4 the the DT cord-000238-om92cx5q 90 5 earlier early JJR cord-000238-om92cx5q 90 6 studies study NNS cord-000238-om92cx5q 90 7 where where WRB cord-000238-om92cx5q 90 8 competition competition NN cord-000238-om92cx5q 90 9 under under IN cord-000238-om92cx5q 90 10 elevated elevated JJ cord-000238-om92cx5q 90 11 mutation mutation NN cord-000238-om92cx5q 90 12 rates rate NNS cord-000238-om92cx5q 90 13 was be VBD cord-000238-om92cx5q 90 14 observed observe VBN cord-000238-om92cx5q 90 15 to to TO cord-000238-om92cx5q 90 16 favor favor VB cord-000238-om92cx5q 90 17 robust robust JJ cord-000238-om92cx5q 90 18 populations population NNS cord-000238-om92cx5q 90 19 , , , cord-000238-om92cx5q 90 20 even even RB cord-000238-om92cx5q 90 21 though though IN cord-000238-om92cx5q 90 22 robustness robustness NN cord-000238-om92cx5q 90 23 was be VBD cord-000238-om92cx5q 90 24 associated associate VBN cord-000238-om92cx5q 90 25 with with IN cord-000238-om92cx5q 90 26 reduced reduce VBN cord-000238-om92cx5q 90 27 reproduction reproduction NN cord-000238-om92cx5q 90 28 . . . cord-000238-om92cx5q 91 1 9 9 CD cord-000238-om92cx5q 91 2 , , , cord-000238-om92cx5q 91 3 13 13 CD cord-000238-om92cx5q 91 4 While while IN cord-000238-om92cx5q 91 5 several several JJ cord-000238-om92cx5q 91 6 of of IN cord-000238-om92cx5q 91 7 these these DT cord-000238-om92cx5q 91 8 studies study NNS cord-000238-om92cx5q 91 9 have have VBP cord-000238-om92cx5q 91 10 provided provide VBN cord-000238-om92cx5q 91 11 evidence evidence NN cord-000238-om92cx5q 91 12 for for IN cord-000238-om92cx5q 91 13 extant extant JJ cord-000238-om92cx5q 91 14 , , , cord-000238-om92cx5q 91 15 evolvable evolvable JJ cord-000238-om92cx5q 91 16 differences difference NNS cord-000238-om92cx5q 91 17 in in IN cord-000238-om92cx5q 91 18 robustness robustness NN cord-000238-om92cx5q 91 19 , , , cord-000238-om92cx5q 91 20 the the DT cord-000238-om92cx5q 91 21 literature literature NN cord-000238-om92cx5q 91 22 is be VBZ cord-000238-om92cx5q 91 23 generally generally RB cord-000238-om92cx5q 91 24 lacking lack VBG cord-000238-om92cx5q 91 25 in in IN cord-000238-om92cx5q 91 26 examples example NNS cord-000238-om92cx5q 91 27 of of IN cord-000238-om92cx5q 91 28 direct direct JJ cord-000238-om92cx5q 91 29 selection selection NN cord-000238-om92cx5q 91 30 for for IN cord-000238-om92cx5q 91 31 robustness robustness NN cord-000238-om92cx5q 91 32 in in IN cord-000238-om92cx5q 91 33 biological biological JJ cord-000238-om92cx5q 91 34 systems system NNS cord-000238-om92cx5q 91 35 . . . cord-000238-om92cx5q 92 1 In in IN cord-000238-om92cx5q 92 2 an an DT cord-000238-om92cx5q 92 3 effort effort NN cord-000238-om92cx5q 92 4 to to TO cord-000238-om92cx5q 92 5 examine examine VB cord-000238-om92cx5q 92 6 direct direct JJ cord-000238-om92cx5q 92 7 selection selection NN cord-000238-om92cx5q 92 8 for for IN cord-000238-om92cx5q 92 9 RNA RNA NNP cord-000238-om92cx5q 92 10 virus virus NN cord-000238-om92cx5q 92 11 resistance resistance NN cord-000238-om92cx5q 92 12 to to IN cord-000238-om92cx5q 92 13 UVC UVC NNP cord-000238-om92cx5q 92 14 damage damage NN cord-000238-om92cx5q 92 15 , , , cord-000238-om92cx5q 92 16 here here RB cord-000238-om92cx5q 92 17 we -PRON- PRP cord-000238-om92cx5q 92 18 present present VBP cord-000238-om92cx5q 92 19 new new JJ cord-000238-om92cx5q 92 20 data datum NNS cord-000238-om92cx5q 92 21 from from IN cord-000238-om92cx5q 92 22 a a DT cord-000238-om92cx5q 92 23 short short JJ cord-000238-om92cx5q 92 24 - - HYPH cord-000238-om92cx5q 92 25 term term NN cord-000238-om92cx5q 92 26 experimental experimental JJ cord-000238-om92cx5q 92 27 evolution evolution NN cord-000238-om92cx5q 92 28 study study NN cord-000238-om92cx5q 92 29 with with IN cord-000238-om92cx5q 92 30 phage phage NN cord-000238-om92cx5q 92 31 6 6 CD cord-000238-om92cx5q 92 32 . . . cord-000238-om92cx5q 93 1 These these DT cord-000238-om92cx5q 93 2 results result NNS cord-000238-om92cx5q 93 3 underscore underscore VBP cord-000238-om92cx5q 93 4 some some DT cord-000238-om92cx5q 93 5 of of IN cord-000238-om92cx5q 93 6 the the DT cord-000238-om92cx5q 93 7 biological biological JJ cord-000238-om92cx5q 93 8 , , , cord-000238-om92cx5q 93 9 methodological methodological JJ cord-000238-om92cx5q 93 10 , , , cord-000238-om92cx5q 93 11 and and CC cord-000238-om92cx5q 93 12 conceptual conceptual JJ cord-000238-om92cx5q 93 13 barriers barrier NNS cord-000238-om92cx5q 93 14 to to IN cord-000238-om92cx5q 93 15 observing observe VBG cord-000238-om92cx5q 93 16 direct direct JJ cord-000238-om92cx5q 93 17 selection selection NN cord-000238-om92cx5q 93 18 for for IN cord-000238-om92cx5q 93 19 robustness robustness NN cord-000238-om92cx5q 93 20 in in IN cord-000238-om92cx5q 93 21 RNA RNA NNP cord-000238-om92cx5q 93 22 virus virus NN cord-000238-om92cx5q 93 23 systems system NNS cord-000238-om92cx5q 93 24 . . . cord-000238-om92cx5q 94 1 UVC UVC NNP cord-000238-om92cx5q 94 2 is be VBZ cord-000238-om92cx5q 94 3 well well RB cord-000238-om92cx5q 94 4 - - HYPH cord-000238-om92cx5q 94 5 known know VBN cord-000238-om92cx5q 94 6 to to TO cord-000238-om92cx5q 94 7 impact impact VB cord-000238-om92cx5q 94 8 RNA rna NN cord-000238-om92cx5q 94 9 viruses virus NNS cord-000238-om92cx5q 94 10 negatively negatively RB cord-000238-om92cx5q 94 11 30 30 CD cord-000238-om92cx5q 94 12 , , , cord-000238-om92cx5q 94 13 31 31 CD cord-000238-om92cx5q 94 14 and and CC cord-000238-om92cx5q 94 15 previous previous JJ cord-000238-om92cx5q 94 16 studies study NNS cord-000238-om92cx5q 94 17 have have VBP cord-000238-om92cx5q 94 18 directly directly RB cord-000238-om92cx5q 94 19 examined examine VBN cord-000238-om92cx5q 94 20 the the DT cord-000238-om92cx5q 94 21 mutagenic mutagenic JJ cord-000238-om92cx5q 94 22 effects effect NNS cord-000238-om92cx5q 94 23 of of IN cord-000238-om92cx5q 94 24 UV uv NN cord-000238-om92cx5q 94 25 radiation radiation NN cord-000238-om92cx5q 94 26 on on IN cord-000238-om92cx5q 94 27 RNA RNA NNP cord-000238-om92cx5q 94 28 genomes genome NNS cord-000238-om92cx5q 94 29 . . . cord-000238-om92cx5q 95 1 13 13 CD cord-000238-om92cx5q 95 2 , , , cord-000238-om92cx5q 95 3 32 32 CD cord-000238-om92cx5q 96 1 Furthermore furthermore RB cord-000238-om92cx5q 96 2 , , , cord-000238-om92cx5q 96 3 evidence evidence NN cord-000238-om92cx5q 96 4 from from IN cord-000238-om92cx5q 96 5 the the DT cord-000238-om92cx5q 96 6 biochemical biochemical JJ cord-000238-om92cx5q 96 7 and and CC cord-000238-om92cx5q 96 8 biophysical biophysical JJ cord-000238-om92cx5q 96 9 literature literature NN cord-000238-om92cx5q 96 10 suggests suggest VBZ cord-000238-om92cx5q 96 11 that that IN cord-000238-om92cx5q 96 12 UV uv NN cord-000238-om92cx5q 96 13 radiation radiation NN cord-000238-om92cx5q 96 14 can can MD cord-000238-om92cx5q 96 15 interfere interfere VB cord-000238-om92cx5q 96 16 with with IN cord-000238-om92cx5q 96 17 RNA RNA NNP cord-000238-om92cx5q 96 18 replication replication NN cord-000238-om92cx5q 96 19 fidelity fidelity NN cord-000238-om92cx5q 96 20 . . . cord-000238-om92cx5q 97 1 [ [ -LRB- cord-000238-om92cx5q 97 2 33 33 CD cord-000238-om92cx5q 97 3 ] ] -RRB- cord-000238-om92cx5q 97 4 [ [ -LRB- cord-000238-om92cx5q 97 5 34 34 CD cord-000238-om92cx5q 97 6 ] ] -RRB- cord-000238-om92cx5q 97 7 [ [ -LRB- cord-000238-om92cx5q 97 8 35 35 CD cord-000238-om92cx5q 97 9 ] ] -RRB- cord-000238-om92cx5q 98 1 Regardless regardless RB cord-000238-om92cx5q 98 2 , , , cord-000238-om92cx5q 98 3 preliminary preliminary JJ cord-000238-om92cx5q 98 4 experiments experiment NNS cord-000238-om92cx5q 98 5 showed show VBD cord-000238-om92cx5q 98 6 that that IN cord-000238-om92cx5q 98 7 UVC uvc NN cord-000238-om92cx5q 98 8 exposure exposure NN cord-000238-om92cx5q 98 9 for for IN cord-000238-om92cx5q 98 10 periods period NNS cord-000238-om92cx5q 98 11 up up IN cord-000238-om92cx5q 98 12 to to TO cord-000238-om92cx5q 98 13 30 30 CD cord-000238-om92cx5q 98 14 min min NN cord-000238-om92cx5q 98 15 greatly greatly RB cord-000238-om92cx5q 98 16 increased increase VBD cord-000238-om92cx5q 98 17 mortality mortality NN cord-000238-om92cx5q 98 18 in in IN cord-000238-om92cx5q 98 19 wild wild JJ cord-000238-om92cx5q 98 20 type type NN cord-000238-om92cx5q 98 21 phage phage NN cord-000238-om92cx5q 98 22 6 6 CD cord-000238-om92cx5q 98 23 ͑Fig ͑fig NN cord-000238-om92cx5q 98 24 . . . cord-000238-om92cx5q 99 1 2͒ 2͒ NNP cord-000238-om92cx5q 99 2 , , , cord-000238-om92cx5q 99 3 indicating indicate VBG cord-000238-om92cx5q 99 4 that that IN cord-000238-om92cx5q 99 5 this this DT cord-000238-om92cx5q 99 6 environmental environmental JJ cord-000238-om92cx5q 99 7 effect effect NN cord-000238-om92cx5q 99 8 should should MD cord-000238-om92cx5q 99 9 produce produce VB cord-000238-om92cx5q 99 10 strong strong JJ cord-000238-om92cx5q 99 11 selection selection NN cord-000238-om92cx5q 99 12 for for IN cord-000238-om92cx5q 99 13 UVC uvc NN cord-000238-om92cx5q 99 14 resistance resistance NN cord-000238-om92cx5q 99 15 in in IN cord-000238-om92cx5q 99 16 populations population NNS cord-000238-om92cx5q 99 17 of of IN cord-000238-om92cx5q 99 18 the the DT cord-000238-om92cx5q 99 19 virus virus NN cord-000238-om92cx5q 99 20 . . . cord-000238-om92cx5q 100 1 We -PRON- PRP cord-000238-om92cx5q 100 2 note note VBP cord-000238-om92cx5q 100 3 that that IN cord-000238-om92cx5q 100 4 identical identical JJ cord-000238-om92cx5q 100 5 UVC UVC NNP cord-000238-om92cx5q 100 6 exposure exposure NN cord-000238-om92cx5q 100 7 was be VBD cord-000238-om92cx5q 100 8 even even RB cord-000238-om92cx5q 100 9 more more RBR cord-000238-om92cx5q 100 10 damaging damaging JJ cord-000238-om92cx5q 100 11 in in IN cord-000238-om92cx5q 100 12 another another DT cord-000238-om92cx5q 100 13 well well RB cord-000238-om92cx5q 100 14 - - HYPH cord-000238-om92cx5q 100 15 studied study VBN cord-000238-om92cx5q 100 16 virus virus NN cord-000238-om92cx5q 100 17 , , , cord-000238-om92cx5q 100 18 the the DT cord-000238-om92cx5q 100 19 ssDNA ssdna JJ cord-000238-om92cx5q 100 20 phage phage NN cord-000238-om92cx5q 100 21 X174 x174 FW cord-000238-om92cx5q 100 22 ͑Fig ͑Fig NNP cord-000238-om92cx5q 100 23 . . . cord-000238-om92cx5q 101 1 2͒ 2͒ LS cord-000238-om92cx5q 101 2 ; ; : cord-000238-om92cx5q 101 3 this this DT cord-000238-om92cx5q 101 4 difference difference NN cord-000238-om92cx5q 101 5 suggested suggest VBD cord-000238-om92cx5q 101 6 that that IN cord-000238-om92cx5q 101 7 RNA RNA NNP cord-000238-om92cx5q 101 8 phage phage NN cord-000238-om92cx5q 101 9 6 6 CD cord-000238-om92cx5q 101 10 may may MD cord-000238-om92cx5q 101 11 be be VB cord-000238-om92cx5q 101 12 relatively relatively RB cord-000238-om92cx5q 101 13 more more RBR cord-000238-om92cx5q 101 14 robust robust JJ cord-000238-om92cx5q 101 15 to to IN cord-000238-om92cx5q 101 16 effects effect NNS cord-000238-om92cx5q 101 17 of of IN cord-000238-om92cx5q 101 18 UVC UVC NNP cord-000238-om92cx5q 101 19 than than IN cord-000238-om92cx5q 101 20 other other JJ cord-000238-om92cx5q 101 21 viruses virus NNS cord-000238-om92cx5q 101 22 , , , cord-000238-om92cx5q 101 23 echoing echo VBG cord-000238-om92cx5q 101 24 our -PRON- PRP$ cord-000238-om92cx5q 101 25 earlier early JJR cord-000238-om92cx5q 101 26 suggestion suggestion NN cord-000238-om92cx5q 101 27 that that IN cord-000238-om92cx5q 101 28 the the DT cord-000238-om92cx5q 101 29 virus virus NN cord-000238-om92cx5q 101 30 was be VBD cord-000238-om92cx5q 101 31 fairly fairly RB cord-000238-om92cx5q 101 32 robust robust JJ cord-000238-om92cx5q 101 33 to to IN cord-000238-om92cx5q 101 34 mutation mutation NN cord-000238-om92cx5q 101 35 accumulation accumulation NN cord-000238-om92cx5q 101 36 . . . cord-000238-om92cx5q 102 1 14 14 CD cord-000238-om92cx5q 103 1 For for IN cord-000238-om92cx5q 103 2 this this DT cord-000238-om92cx5q 103 3 reason reason NN cord-000238-om92cx5q 103 4 , , , cord-000238-om92cx5q 103 5 experimental experimental JJ cord-000238-om92cx5q 103 6 evolution evolution NN cord-000238-om92cx5q 103 7 of of IN cord-000238-om92cx5q 103 8 phage phage NN cord-000238-om92cx5q 103 9 6 6 CD cord-000238-om92cx5q 103 10 under under IN cord-000238-om92cx5q 103 11 UVC UVC NNP cord-000238-om92cx5q 103 12 exposure exposure NN cord-000238-om92cx5q 103 13 may may MD cord-000238-om92cx5q 103 14 provide provide VB cord-000238-om92cx5q 103 15 a a DT cord-000238-om92cx5q 103 16 conservative conservative JJ cord-000238-om92cx5q 103 17 test test NN cord-000238-om92cx5q 103 18 for for IN cord-000238-om92cx5q 103 19 whether whether IN cord-000238-om92cx5q 103 20 virus virus NN cord-000238-om92cx5q 103 21 populations population NNS cord-000238-om92cx5q 103 22 can can MD cord-000238-om92cx5q 103 23 adapt adapt VB cord-000238-om92cx5q 103 24 to to TO cord-000238-om92cx5q 103 25 resist resist VB cord-000238-om92cx5q 103 26 the the DT cord-000238-om92cx5q 103 27 debilitating debilitating JJ cord-000238-om92cx5q 103 28 effects effect NNS cord-000238-om92cx5q 103 29 of of IN cord-000238-om92cx5q 103 30 UV uv NN cord-000238-om92cx5q 103 31 . . . cord-000238-om92cx5q 104 1 A a DT cord-000238-om92cx5q 104 2 single single JJ cord-000238-om92cx5q 104 3 clone clone NN cord-000238-om92cx5q 104 4 of of IN cord-000238-om92cx5q 104 5 wild wild JJ cord-000238-om92cx5q 104 6 type type NN cord-000238-om92cx5q 104 7 phage phage NN cord-000238-om92cx5q 104 8 6 6 CD cord-000238-om92cx5q 104 9 was be VBD cord-000238-om92cx5q 104 10 used use VBN cord-000238-om92cx5q 104 11 to to TO cord-000238-om92cx5q 104 12 found find VBD cord-000238-om92cx5q 104 13 three three CD cord-000238-om92cx5q 104 14 replicate replicate VB cord-000238-om92cx5q 104 15 populations population NNS cord-000238-om92cx5q 104 16 in in IN cord-000238-om92cx5q 104 17 each each DT cord-000238-om92cx5q 104 18 of of IN cord-000238-om92cx5q 104 19 three three CD cord-000238-om92cx5q 104 20 experimental experimental JJ cord-000238-om92cx5q 104 21 treatments treatment NNS cord-000238-om92cx5q 104 22 ͑nine ͑nine , cord-000238-om92cx5q 104 23 populations population NNS cord-000238-om92cx5q 104 24 total͒ total͒ NNS cord-000238-om92cx5q 104 25 , , , cord-000238-om92cx5q 104 26 where where WRB cord-000238-om92cx5q 104 27 UVC uvc NN cord-000238-om92cx5q 104 28 exposure exposure NN cord-000238-om92cx5q 104 29 was be VBD cord-000238-om92cx5q 104 30 manipulated manipulate VBN cord-000238-om92cx5q 104 31 using use VBG cord-000238-om92cx5q 104 32 our -PRON- PRP$ cord-000238-om92cx5q 104 33 published publish VBN cord-000238-om92cx5q 104 34 methods method NNS cord-000238-om92cx5q 104 35 . . . cord-000238-om92cx5q 105 1 16 16 CD cord-000238-om92cx5q 106 1 A a DT cord-000238-om92cx5q 106 2 200 200 CD cord-000238-om92cx5q 106 3 ml ml NN cord-000238-om92cx5q 106 4 aliquot aliquot NN cord-000238-om92cx5q 106 5 containing contain VBG cord-000238-om92cx5q 106 6 ϳ10 ϳ10 CD cord-000238-om92cx5q 106 7 6 6 CD cord-000238-om92cx5q 106 8 plaque plaque NN cord-000238-om92cx5q 106 9 - - HYPH cord-000238-om92cx5q 106 10 forming form VBG cord-000238-om92cx5q 106 11 units unit NNS cord-000238-om92cx5q 106 12 ͑pfu ͑pfu CD cord-000238-om92cx5q 106 13 ; ; , cord-000238-om92cx5q 106 14 i.e. i.e. FW cord-000238-om92cx5q 106 15 , , , cord-000238-om92cx5q 106 16 viable viable JJ cord-000238-om92cx5q 106 17 virus virus NN cord-000238-om92cx5q 106 18 particles͒ particles͒ NN cord-000238-om92cx5q 106 19 of of IN cord-000238-om92cx5q 106 20 each each DT cord-000238-om92cx5q 106 21 population population NN cord-000238-om92cx5q 106 22 was be VBD cord-000238-om92cx5q 106 23 suspended suspend VBN cord-000238-om92cx5q 106 24 in in IN cord-000238-om92cx5q 106 25 Luria Luria NNP cord-000238-om92cx5q 106 26 broth broth NN cord-000238-om92cx5q 106 27 culture culture NN cord-000238-om92cx5q 106 28 medium medium NN cord-000238-om92cx5q 106 29 in in IN cord-000238-om92cx5q 106 30 the the DT cord-000238-om92cx5q 106 31 absence absence NN cord-000238-om92cx5q 106 32 of of IN cord-000238-om92cx5q 106 33 cells cell NNS cord-000238-om92cx5q 106 34 . . . cord-000238-om92cx5q 107 1 Aliquots aliquot NNS cord-000238-om92cx5q 107 2 were be VBD cord-000238-om92cx5q 107 3 then then RB cord-000238-om92cx5q 107 4 placed place VBN cord-000238-om92cx5q 107 5 in in IN cord-000238-om92cx5q 107 6 wells well NNS cord-000238-om92cx5q 107 7 of of IN cord-000238-om92cx5q 107 8 a a DT cord-000238-om92cx5q 107 9 flat flat RB cord-000238-om92cx5q 107 10 - - HYPH cord-000238-om92cx5q 107 11 bottomed bottomed JJ cord-000238-om92cx5q 107 12 polystyrene polystyrene NN cord-000238-om92cx5q 107 13 96well 96well CD cord-000238-om92cx5q 107 14 plate plate NN cord-000238-om92cx5q 107 15 . . . cord-000238-om92cx5q 108 1 A a DT cord-000238-om92cx5q 108 2 UV uv NN cord-000238-om92cx5q 108 3 illuminator illuminator NN cord-000238-om92cx5q 108 4 ͑Spectroline ͑Spectroline . cord-000238-om92cx5q 109 1 Long long JJ cord-000238-om92cx5q 109 2 Life Life NNP cord-000238-om92cx5q 109 3 Filter͒ Filter͒ NNP cord-000238-om92cx5q 109 4 was be VBD cord-000238-om92cx5q 109 5 placed place VBN cord-000238-om92cx5q 109 6 over over IN cord-000238-om92cx5q 109 7 the the DT cord-000238-om92cx5q 109 8 96-well 96-well CD cord-000238-om92cx5q 109 9 plate plate NN cord-000238-om92cx5q 109 10 to to TO cord-000238-om92cx5q 109 11 expose expose VB cord-000238-om92cx5q 109 12 the the DT cord-000238-om92cx5q 109 13 virus virus NN cord-000238-om92cx5q 109 14 samples sample NNS cord-000238-om92cx5q 109 15 to to IN cord-000238-om92cx5q 109 16 UVC UVC NNP cord-000238-om92cx5q 109 17 emission emission NN cord-000238-om92cx5q 109 18 . . . cord-000238-om92cx5q 110 1 " " `` cord-000238-om92cx5q 110 2 High high JJ cord-000238-om92cx5q 110 3 dosage dosage NN cord-000238-om92cx5q 110 4 " " '' cord-000238-om92cx5q 110 5 treatment treatment NN cord-000238-om92cx5q 110 6 exposed expose VBD cord-000238-om92cx5q 110 7 FIG fig NN cord-000238-om92cx5q 110 8 . . . cord-000238-om92cx5q 111 1 2 2 LS cord-000238-om92cx5q 111 2 . . . cord-000238-om92cx5q 112 1 Death death NN cord-000238-om92cx5q 112 2 curves curve NNS cord-000238-om92cx5q 112 3 for for IN cord-000238-om92cx5q 112 4 virus virus NN cord-000238-om92cx5q 112 5 strains strain NNS cord-000238-om92cx5q 112 6 in in IN cord-000238-om92cx5q 112 7 response response NN cord-000238-om92cx5q 112 8 to to IN cord-000238-om92cx5q 112 9 differing differ VBG cord-000238-om92cx5q 112 10 dosages dosage NNS cord-000238-om92cx5q 112 11 of of IN cord-000238-om92cx5q 112 12 UVC UVC NNP cord-000238-om92cx5q 112 13 exposure exposure NN cord-000238-om92cx5q 112 14 . . . cord-000238-om92cx5q 113 1 Wild wild JJ cord-000238-om92cx5q 113 2 type type NN cord-000238-om92cx5q 113 3 RNA rna NN cord-000238-om92cx5q 113 4 phage phage NN cord-000238-om92cx5q 113 5 6 6 CD cord-000238-om92cx5q 114 1 ͑filled ͑fille VBD cord-000238-om92cx5q 114 2 circles͒ circles͒ `` cord-000238-om92cx5q 114 3 better well JJR cord-000238-om92cx5q 114 4 withstands withstand VBZ cord-000238-om92cx5q 114 5 UVC uvc NN cord-000238-om92cx5q 114 6 degradation degradation NN cord-000238-om92cx5q 114 7 than than IN cord-000238-om92cx5q 114 8 does do VBZ cord-000238-om92cx5q 114 9 DNA dna NN cord-000238-om92cx5q 114 10 phage phage NN cord-000238-om92cx5q 114 11 X174 x174 XX cord-000238-om92cx5q 114 12 ͑filled ͑fille VBN cord-000238-om92cx5q 115 1 squares͒. squares͒. NNP cord-000238-om92cx5q 115 2 A a DT cord-000238-om92cx5q 115 3 phage phage NN cord-000238-om92cx5q 115 4 6 6 CD cord-000238-om92cx5q 115 5 population population NN cord-000238-om92cx5q 115 6 experimentally experimentally RB cord-000238-om92cx5q 115 7 evolved evolve VBD cord-000238-om92cx5q 115 8 for for IN cord-000238-om92cx5q 115 9 20 20 CD cord-000238-om92cx5q 115 10 generations generation NNS cord-000238-om92cx5q 115 11 under under IN cord-000238-om92cx5q 115 12 2.5 2.5 CD cord-000238-om92cx5q 115 13 min min NN cord-000238-om92cx5q 115 14 UVC UVC NNP cord-000238-om92cx5q 115 15 exposure exposure NN cord-000238-om92cx5q 115 16 ͑open ͑open , cord-000238-om92cx5q 115 17 circles͒ circles͒ NNP cord-000238-om92cx5q 115 18 survives survive VBZ cord-000238-om92cx5q 115 19 better well RBR cord-000238-om92cx5q 115 20 than than IN cord-000238-om92cx5q 115 21 its -PRON- PRP$ cord-000238-om92cx5q 115 22 ancestor ancestor NN cord-000238-om92cx5q 115 23 , , , cord-000238-om92cx5q 115 24 except except IN cord-000238-om92cx5q 115 25 under under IN cord-000238-om92cx5q 115 26 prolonged prolong VBN cord-000238-om92cx5q 115 27 dosage dosage NN cord-000238-om92cx5q 115 28 . . . cord-000238-om92cx5q 116 1 In in IN cord-000238-om92cx5q 116 2 contrast contrast NN cord-000238-om92cx5q 116 3 , , , cord-000238-om92cx5q 116 4 a a DT cord-000238-om92cx5q 116 5 representative representative JJ cord-000238-om92cx5q 116 6 phage phage NN cord-000238-om92cx5q 116 7 6 6 CD cord-000238-om92cx5q 116 8 control control NN cord-000238-om92cx5q 116 9 population population NN cord-000238-om92cx5q 116 10 ͑gray ͑gray , cord-000238-om92cx5q 116 11 circles͒ circles͒ NNP cord-000238-om92cx5q 116 12 evolved evolve VBD cord-000238-om92cx5q 116 13 in in IN cord-000238-om92cx5q 116 14 absence absence NN cord-000238-om92cx5q 116 15 of of IN cord-000238-om92cx5q 116 16 UVC UVC NNP cord-000238-om92cx5q 116 17 exposure exposure NN cord-000238-om92cx5q 116 18 presents present VBZ cord-000238-om92cx5q 116 19 a a DT cord-000238-om92cx5q 116 20 death death NN cord-000238-om92cx5q 116 21 curve curve NN cord-000238-om92cx5q 116 22 nearly nearly RB cord-000238-om92cx5q 116 23 identical identical JJ cord-000238-om92cx5q 116 24 to to IN cord-000238-om92cx5q 116 25 the the DT cord-000238-om92cx5q 116 26 ancestor ancestor NN cord-000238-om92cx5q 116 27 . . . cord-000238-om92cx5q 117 1 See see VB cord-000238-om92cx5q 117 2 text text NN cord-000238-om92cx5q 117 3 for for IN cord-000238-om92cx5q 117 4 details detail NNS cord-000238-om92cx5q 117 5 . . . cord-000238-om92cx5q 118 1 populations population NNS cord-000238-om92cx5q 118 2 to to IN cord-000238-om92cx5q 118 3 UVC UVC NNP cord-000238-om92cx5q 118 4 for for IN cord-000238-om92cx5q 118 5 15 15 CD cord-000238-om92cx5q 118 6 min min NN cord-000238-om92cx5q 118 7 , , , cord-000238-om92cx5q 118 8 " " `` cord-000238-om92cx5q 118 9 low low JJ cord-000238-om92cx5q 118 10 dosage dosage NN cord-000238-om92cx5q 118 11 " " '' cord-000238-om92cx5q 118 12 treatment treatment NN cord-000238-om92cx5q 118 13 exposed expose VBD cord-000238-om92cx5q 118 14 them -PRON- PRP cord-000238-om92cx5q 118 15 for for IN cord-000238-om92cx5q 118 16 2.5 2.5 CD cord-000238-om92cx5q 118 17 min min NN cord-000238-om92cx5q 118 18 , , , cord-000238-om92cx5q 118 19 and and CC cord-000238-om92cx5q 118 20 the the DT cord-000238-om92cx5q 118 21 " " `` cord-000238-om92cx5q 118 22 control control NN cord-000238-om92cx5q 118 23 " " '' cord-000238-om92cx5q 118 24 treatment treatment NN cord-000238-om92cx5q 118 25 populations population NNS cord-000238-om92cx5q 118 26 were be VBD cord-000238-om92cx5q 118 27 never never RB cord-000238-om92cx5q 118 28 exposed expose VBN cord-000238-om92cx5q 118 29 to to IN cord-000238-om92cx5q 118 30 UVC UVC NNP cord-000238-om92cx5q 118 31 . . . cord-000238-om92cx5q 119 1 Following follow VBG cord-000238-om92cx5q 119 2 this this DT cord-000238-om92cx5q 119 3 manipulation manipulation NN cord-000238-om92cx5q 119 4 , , , cord-000238-om92cx5q 119 5 each each DT cord-000238-om92cx5q 119 6 population population NN cord-000238-om92cx5q 119 7 was be VBD cord-000238-om92cx5q 119 8 mixed mixed JJ cord-000238-om92cx5q 120 1 ͑1:1 ͑1:1 , cord-000238-om92cx5q 120 2 volumetric͒ volumetric͒ UH cord-000238-om92cx5q 120 3 with with IN cord-000238-om92cx5q 120 4 P. P. NNP cord-000238-om92cx5q 120 5 phaseolicola phaseolicola NNP cord-000238-om92cx5q 120 6 bacteria bacteria NNS cord-000238-om92cx5q 121 1 ͑i.e ͑i.e NFP cord-000238-om92cx5q 121 2 . . . cord-000238-om92cx5q 122 1 , , , cord-000238-om92cx5q 122 2 ϳ4 ϳ4 NNP cord-000238-om92cx5q 122 3 ϫ ϫ NNP cord-000238-om92cx5q 122 4 10 10 CD cord-000238-om92cx5q 122 5 9 9 CD cord-000238-om92cx5q 122 6 cells͒ cells͒ NNS cord-000238-om92cx5q 122 7 and and CC cord-000238-om92cx5q 122 8 incubated incubate VBN cord-000238-om92cx5q 122 9 at at IN cord-000238-om92cx5q 122 10 25 25 CD cord-000238-om92cx5q 122 11 ° ° NN cord-000238-om92cx5q 122 12 C c NN cord-000238-om92cx5q 122 13 for for IN cord-000238-om92cx5q 122 14 an an DT cord-000238-om92cx5q 122 15 additional additional JJ cord-000238-om92cx5q 122 16 120 120 CD cord-000238-om92cx5q 122 17 min min NN cord-000238-om92cx5q 122 18 , , , cord-000238-om92cx5q 122 19 sufficient sufficient JJ cord-000238-om92cx5q 122 20 time time NN cord-000238-om92cx5q 122 21 for for IN cord-000238-om92cx5q 122 22 at at RB cord-000238-om92cx5q 122 23 least least RBS cord-000238-om92cx5q 122 24 one one CD cord-000238-om92cx5q 122 25 virus virus NN cord-000238-om92cx5q 122 26 generation generation NN cord-000238-om92cx5q 122 27 consisting consist VBG cord-000238-om92cx5q 122 28 of of IN cord-000238-om92cx5q 122 29 cell cell NN cord-000238-om92cx5q 122 30 attachment attachment NN cord-000238-om92cx5q 122 31 / / SYM cord-000238-om92cx5q 122 32 entry entry NN cord-000238-om92cx5q 122 33 , , , cord-000238-om92cx5q 122 34 intracellular intracellular JJ cord-000238-om92cx5q 122 35 replication replication NN cord-000238-om92cx5q 122 36 of of IN cord-000238-om92cx5q 122 37 virus virus NN cord-000238-om92cx5q 122 38 progeny progeny NN cord-000238-om92cx5q 122 39 , , , cord-000238-om92cx5q 122 40 and and CC cord-000238-om92cx5q 122 41 cell cell NN cord-000238-om92cx5q 122 42 lysis lysis NN cord-000238-om92cx5q 122 43 ͑death͒ ͑death͒ , cord-000238-om92cx5q 122 44 that that WDT cord-000238-om92cx5q 122 45 bursts burst VBZ cord-000238-om92cx5q 122 46 the the DT cord-000238-om92cx5q 122 47 cell cell NN cord-000238-om92cx5q 122 48 to to TO cord-000238-om92cx5q 122 49 liberate liberate VB cord-000238-om92cx5q 122 50 offspring offspring NN cord-000238-om92cx5q 122 51 . . . cord-000238-om92cx5q 123 1 A a DT cord-000238-om92cx5q 123 2 typical typical JJ cord-000238-om92cx5q 123 3 burst burst NN cord-000238-om92cx5q 123 4 in in IN cord-000238-om92cx5q 123 5 phage phage NN cord-000238-om92cx5q 123 6 6 6 CD cord-000238-om92cx5q 123 7 produces produce VBZ cord-000238-om92cx5q 123 8 ϳ200 ϳ200 NN cord-000238-om92cx5q 123 9 viral viral JJ cord-000238-om92cx5q 123 10 progeny progeny NN cord-000238-om92cx5q 123 11 per per IN cord-000238-om92cx5q 123 12 infected infected JJ cord-000238-om92cx5q 123 13 cell cell NN cord-000238-om92cx5q 123 14 36 36 CD cord-000238-om92cx5q 124 1 ͑we ͑we NNP cord-000238-om92cx5q 124 2 note note VBP cord-000238-om92cx5q 124 3 that that IN cord-000238-om92cx5q 124 4 the the DT cord-000238-om92cx5q 124 5 host host NN cord-000238-om92cx5q 124 6 bacteria bacteria NNS cord-000238-om92cx5q 124 7 were be VBD cord-000238-om92cx5q 124 8 never never RB cord-000238-om92cx5q 124 9 exposed expose VBN cord-000238-om92cx5q 124 10 to to IN cord-000238-om92cx5q 124 11 UVC UVC NNP cord-000238-om92cx5q 124 12 , , , cord-000238-om92cx5q 124 13 eliminating eliminate VBG cord-000238-om92cx5q 124 14 the the DT cord-000238-om92cx5q 124 15 possibility possibility NN cord-000238-om92cx5q 124 16 that that IN cord-000238-om92cx5q 124 17 UVC UVC NNP cord-000238-om92cx5q 124 18 negatively negatively RB cord-000238-om92cx5q 124 19 impacted impact VBD cord-000238-om92cx5q 124 20 cell cell NN cord-000238-om92cx5q 124 21 physiology physiology NN cord-000238-om92cx5q 124 22 or or CC cord-000238-om92cx5q 124 23 caused cause VBN cord-000238-om92cx5q 124 24 host host NN cord-000238-om92cx5q 124 25 mutagenesis͒. mutagenesis͒. NNP cord-000238-om92cx5q 125 1 After after IN cord-000238-om92cx5q 125 2 120 120 CD cord-000238-om92cx5q 125 3 min min NN cord-000238-om92cx5q 125 4 , , , cord-000238-om92cx5q 125 5 the the DT cord-000238-om92cx5q 125 6 mixture mixture NN cord-000238-om92cx5q 125 7 was be VBD cord-000238-om92cx5q 125 8 centrifuged centrifuge VBN cord-000238-om92cx5q 125 9 to to IN cord-000238-om92cx5q 125 10 pellet pellet NN cord-000238-om92cx5q 125 11 cells cell NNS cord-000238-om92cx5q 125 12 , , , cord-000238-om92cx5q 125 13 and and CC cord-000238-om92cx5q 125 14 the the DT cord-000238-om92cx5q 125 15 supernatant supernatant NN cord-000238-om92cx5q 125 16 was be VBD cord-000238-om92cx5q 125 17 filtered filter VBN cord-000238-om92cx5q 125 18 to to TO cord-000238-om92cx5q 125 19 harvest harvest VB cord-000238-om92cx5q 125 20 a a DT cord-000238-om92cx5q 125 21 cell cell NN cord-000238-om92cx5q 125 22 - - HYPH cord-000238-om92cx5q 125 23 free free JJ cord-000238-om92cx5q 125 24 virus virus NN cord-000238-om92cx5q 125 25 lysate lysate NN cord-000238-om92cx5q 125 26 containing contain VBG cord-000238-om92cx5q 125 27 up up RP cord-000238-om92cx5q 125 28 to to IN cord-000238-om92cx5q 125 29 ϳ2 ϳ2 NNP cord-000238-om92cx5q 125 30 ϫ ϫ NNP cord-000238-om92cx5q 125 31 10 10 CD cord-000238-om92cx5q 125 32 8 8 CD cord-000238-om92cx5q 125 33 pfu pfu NN cord-000238-om92cx5q 125 34 of of IN cord-000238-om92cx5q 125 35 virus virus NN cord-000238-om92cx5q 125 36 progeny progeny NN cord-000238-om92cx5q 125 37 . . . cord-000238-om92cx5q 126 1 The the DT cord-000238-om92cx5q 126 2 lysate lysate NN cord-000238-om92cx5q 126 3 was be VBD cord-000238-om92cx5q 126 4 then then RB cord-000238-om92cx5q 126 5 stored store VBN cord-000238-om92cx5q 126 6 at at IN cord-000238-om92cx5q 126 7 4 4 CD cord-000238-om92cx5q 126 8 ° ° NN cord-000238-om92cx5q 126 9 C c NN cord-000238-om92cx5q 126 10 for for IN cord-000238-om92cx5q 126 11 22 22 CD cord-000238-om92cx5q 126 12 h. h. NN cord-000238-om92cx5q 127 1 The the DT cord-000238-om92cx5q 127 2 lysate lysate NN cord-000238-om92cx5q 127 3 was be VBD cord-000238-om92cx5q 127 4 diluted dilute VBN cord-000238-om92cx5q 127 5 100-fold 100-fold CD cord-000238-om92cx5q 127 6 and and CC cord-000238-om92cx5q 127 7 used use VBN cord-000238-om92cx5q 127 8 to to TO cord-000238-om92cx5q 127 9 initiate initiate VB cord-000238-om92cx5q 127 10 the the DT cord-000238-om92cx5q 127 11 next next JJ cord-000238-om92cx5q 127 12 passage passage NN cord-000238-om92cx5q 127 13 where where WRB cord-000238-om92cx5q 127 14 the the DT cord-000238-om92cx5q 127 15 phage phage NN cord-000238-om92cx5q 127 16 population population NN cord-000238-om92cx5q 127 17 was be VBD cord-000238-om92cx5q 127 18 again again RB cord-000238-om92cx5q 127 19 subjected subject VBN cord-000238-om92cx5q 127 20 to to IN cord-000238-om92cx5q 127 21 treatment treatment NN cord-000238-om92cx5q 127 22 or or CC cord-000238-om92cx5q 127 23 control control NN cord-000238-om92cx5q 127 24 conditions condition NNS cord-000238-om92cx5q 127 25 , , , cord-000238-om92cx5q 127 26 and and CC cord-000238-om92cx5q 127 27 allowed allow VBN cord-000238-om92cx5q 127 28 to to TO cord-000238-om92cx5q 127 29 infect infect VB cord-000238-om92cx5q 127 30 naive naive JJ cord-000238-om92cx5q 127 31 bacteria bacteria NNS cord-000238-om92cx5q 127 32 freshly freshly RB cord-000238-om92cx5q 127 33 cultured culture VBN cord-000238-om92cx5q 127 34 from from IN cord-000238-om92cx5q 127 35 frozen frozen JJ cord-000238-om92cx5q 127 36 stock stock NN cord-000238-om92cx5q 128 1 ͑i.e ͑i.e NFP cord-000238-om92cx5q 128 2 . . . cord-000238-om92cx5q 128 3 , , , cord-000238-om92cx5q 128 4 to to TO cord-000238-om92cx5q 128 5 eliminate eliminate VB cord-000238-om92cx5q 128 6 possibility possibility NN cord-000238-om92cx5q 128 7 of of IN cord-000238-om92cx5q 128 8 phage phage NN cord-000238-om92cx5q 128 9 - - HYPH cord-000238-om92cx5q 128 10 bacteria bacteria NNS cord-000238-om92cx5q 128 11 coevo coevo NN cord-000238-om92cx5q 128 12 - - HYPH cord-000238-om92cx5q 128 13 lution͒. lution͒. NNP cord-000238-om92cx5q 129 1 Thus thus RB cord-000238-om92cx5q 129 2 , , , cord-000238-om92cx5q 129 3 experimental experimental JJ cord-000238-om92cx5q 129 4 populations population NNS cord-000238-om92cx5q 129 5 were be VBD cord-000238-om92cx5q 129 6 challenged challenge VBN cord-000238-om92cx5q 129 7 to to TO cord-000238-om92cx5q 129 8 produce produce VB cord-000238-om92cx5q 129 9 sufficient sufficient JJ cord-000238-om92cx5q 129 10 progeny progeny NN cord-000238-om92cx5q 129 11 to to TO cord-000238-om92cx5q 129 12 sustain sustain VB cord-000238-om92cx5q 129 13 themselves -PRON- PRP cord-000238-om92cx5q 129 14 in in IN cord-000238-om92cx5q 129 15 the the DT cord-000238-om92cx5q 129 16 face face NN cord-000238-om92cx5q 129 17 of of IN cord-000238-om92cx5q 129 18 the the DT cord-000238-om92cx5q 129 19 daily daily JJ cord-000238-om92cx5q 129 20 100-fold 100-fold CD cord-000238-om92cx5q 129 21 dilution dilution NN cord-000238-om92cx5q 129 22 ; ; : cord-000238-om92cx5q 129 23 UVC UVC NNP cord-000238-om92cx5q 129 24 was be VBD cord-000238-om92cx5q 129 25 an an DT cord-000238-om92cx5q 129 26 environmental environmental JJ cord-000238-om92cx5q 129 27 stressor stressor NN cord-000238-om92cx5q 129 28 that that WDT cord-000238-om92cx5q 129 29 could could MD cord-000238-om92cx5q 129 30 reduce reduce VB cord-000238-om92cx5q 129 31 the the DT cord-000238-om92cx5q 129 32 likelihood likelihood NN cord-000238-om92cx5q 129 33 of of IN cord-000238-om92cx5q 129 34 this this DT cord-000238-om92cx5q 129 35 sustainability sustainability NN cord-000238-om92cx5q 129 36 unless unless IN cord-000238-om92cx5q 129 37 viruses virus NNS cord-000238-om92cx5q 129 38 responded respond VBD cord-000238-om92cx5q 129 39 through through IN cord-000238-om92cx5q 129 40 adaptation adaptation NN cord-000238-om92cx5q 129 41 . . . cord-000238-om92cx5q 130 1 A a DT cord-000238-om92cx5q 130 2 total total NN cord-000238-om92cx5q 130 3 of of IN cord-000238-om92cx5q 130 4 20 20 CD cord-000238-om92cx5q 130 5 passages passage NNS cord-000238-om92cx5q 130 6 ͑i.e ͑i.e . cord-000238-om92cx5q 130 7 . . . cord-000238-om92cx5q 131 1 , , , cord-000238-om92cx5q 131 2 20 20 CD cord-000238-om92cx5q 131 3 generations͒ generations͒ NN cord-000238-om92cx5q 131 4 occurred occur VBD cord-000238-om92cx5q 131 5 in in IN cord-000238-om92cx5q 131 6 the the DT cord-000238-om92cx5q 131 7 short short JJ cord-000238-om92cx5q 131 8 - - HYPH cord-000238-om92cx5q 131 9 term term NN cord-000238-om92cx5q 131 10 selection selection NN cord-000238-om92cx5q 131 11 experiment experiment NN cord-000238-om92cx5q 131 12 , , , cord-000238-om92cx5q 131 13 and and CC cord-000238-om92cx5q 131 14 samples sample NNS cord-000238-om92cx5q 131 15 at at IN cord-000238-om92cx5q 131 16 each each DT cord-000238-om92cx5q 131 17 passage passage NN cord-000238-om92cx5q 131 18 were be VBD cord-000238-om92cx5q 131 19 stored store VBN cord-000238-om92cx5q 131 20 at at IN cord-000238-om92cx5q 131 21 −80 −80 NNP cord-000238-om92cx5q 131 22 ° ° NN cord-000238-om92cx5q 131 23 C c NN cord-000238-om92cx5q 131 24 for for IN cord-000238-om92cx5q 131 25 future future JJ cord-000238-om92cx5q 131 26 analysis analysis NN cord-000238-om92cx5q 131 27 . . . cord-000238-om92cx5q 132 1 At at IN cord-000238-om92cx5q 132 2 the the DT cord-000238-om92cx5q 132 3 end end NN cord-000238-om92cx5q 132 4 of of IN cord-000238-om92cx5q 132 5 the the DT cord-000238-om92cx5q 132 6 study study NN cord-000238-om92cx5q 132 7 , , , cord-000238-om92cx5q 132 8 replicated replicate VBD cord-000238-om92cx5q 132 9 ͑n ͑n NNP cord-000238-om92cx5q 132 10 = = SYM cord-000238-om92cx5q 132 11 4͒ 4͒ CD cord-000238-om92cx5q 132 12 assays assay NNS cord-000238-om92cx5q 132 13 were be VBD cord-000238-om92cx5q 132 14 performed perform VBN cord-000238-om92cx5q 132 15 to to TO cord-000238-om92cx5q 132 16 gauge gauge VB cord-000238-om92cx5q 132 17 whether whether IN cord-000238-om92cx5q 132 18 the the DT cord-000238-om92cx5q 132 19 survival survival NN cord-000238-om92cx5q 132 20 of of IN cord-000238-om92cx5q 132 21 treatment treatment NN cord-000238-om92cx5q 132 22 populations population NNS cord-000238-om92cx5q 132 23 had have VBD cord-000238-om92cx5q 132 24 changed change VBN cord-000238-om92cx5q 132 25 during during IN cord-000238-om92cx5q 132 26 the the DT cord-000238-om92cx5q 132 27 experiment experiment NN cord-000238-om92cx5q 132 28 . . . cord-000238-om92cx5q 133 1 Evolved evolved JJ cord-000238-om92cx5q 133 2 populations population NNS cord-000238-om92cx5q 133 3 were be VBD cord-000238-om92cx5q 133 4 measured measure VBN cord-000238-om92cx5q 133 5 for for IN cord-000238-om92cx5q 133 6 frequency frequency NN cord-000238-om92cx5q 133 7 of of IN cord-000238-om92cx5q 133 8 surviving survive VBG cord-000238-om92cx5q 133 9 virions virion NNS cord-000238-om92cx5q 133 10 , , , cord-000238-om92cx5q 133 11 in in IN cord-000238-om92cx5q 133 12 assays assay NNS cord-000238-om92cx5q 133 13 where where WRB cord-000238-om92cx5q 133 14 samples sample NNS cord-000238-om92cx5q 133 15 containing contain VBG cord-000238-om92cx5q 133 16 ϳ10 ϳ10 CD cord-000238-om92cx5q 133 17 6 6 CD cord-000238-om92cx5q 133 18 pfu pfu NN cord-000238-om92cx5q 133 19 of of IN cord-000238-om92cx5q 133 20 virus virus NN cord-000238-om92cx5q 133 21 were be VBD cord-000238-om92cx5q 133 22 exposed expose VBN cord-000238-om92cx5q 133 23 to to IN cord-000238-om92cx5q 133 24 UVC UVC NNP cord-000238-om92cx5q 133 25 for for IN cord-000238-om92cx5q 133 26 six six CD cord-000238-om92cx5q 133 27 different different JJ cord-000238-om92cx5q 133 28 time time NN cord-000238-om92cx5q 133 29 periods period NNS cord-000238-om92cx5q 133 30 : : : cord-000238-om92cx5q 133 31 1 1 CD cord-000238-om92cx5q 133 32 , , , cord-000238-om92cx5q 133 33 2.5 2.5 CD cord-000238-om92cx5q 133 34 , , , cord-000238-om92cx5q 133 35 5 5 CD cord-000238-om92cx5q 133 36 , , , cord-000238-om92cx5q 133 37 10 10 CD cord-000238-om92cx5q 133 38 , , , cord-000238-om92cx5q 133 39 15 15 CD cord-000238-om92cx5q 133 40 , , , cord-000238-om92cx5q 133 41 and and CC cord-000238-om92cx5q 133 42 30 30 CD cord-000238-om92cx5q 133 43 min min NN cord-000238-om92cx5q 133 44 . . . cord-000238-om92cx5q 134 1 Results result NNS cord-000238-om92cx5q 134 2 showed show VBD cord-000238-om92cx5q 134 3 that that IN cord-000238-om92cx5q 134 4 after after IN cord-000238-om92cx5q 134 5 20 20 CD cord-000238-om92cx5q 134 6 passages passage NNS cord-000238-om92cx5q 134 7 the the DT cord-000238-om92cx5q 134 8 death death NN cord-000238-om92cx5q 134 9 curves curve NNS cord-000238-om92cx5q 134 10 for for IN cord-000238-om92cx5q 134 11 the the DT cord-000238-om92cx5q 134 12 populations population NNS cord-000238-om92cx5q 134 13 in in IN cord-000238-om92cx5q 134 14 the the DT cord-000238-om92cx5q 134 15 control control NN cord-000238-om92cx5q 134 16 treatment treatment NN cord-000238-om92cx5q 134 17 were be VBD cord-000238-om92cx5q 134 18 highly highly RB cord-000238-om92cx5q 134 19 similar similar JJ cord-000238-om92cx5q 134 20 to to IN cord-000238-om92cx5q 134 21 that that DT cord-000238-om92cx5q 134 22 presented present VBN cord-000238-om92cx5q 134 23 by by IN cord-000238-om92cx5q 134 24 the the DT cord-000238-om92cx5q 134 25 wild wild JJ cord-000238-om92cx5q 134 26 type type NN cord-000238-om92cx5q 134 27 phage phage NN cord-000238-om92cx5q 134 28 6 6 CD cord-000238-om92cx5q 134 29 ancestor ancestor NN cord-000238-om92cx5q 134 30 ; ; : cord-000238-om92cx5q 134 31 Fig Fig NNP cord-000238-om92cx5q 134 32 . . . cord-000238-om92cx5q 135 1 2 2 CD cord-000238-om92cx5q 135 2 shows show VBZ cord-000238-om92cx5q 135 3 a a DT cord-000238-om92cx5q 135 4 representative representative JJ cord-000238-om92cx5q 135 5 outcome outcome NN cord-000238-om92cx5q 135 6 for for IN cord-000238-om92cx5q 135 7 one one CD cord-000238-om92cx5q 135 8 of of IN cord-000238-om92cx5q 135 9 the the DT cord-000238-om92cx5q 135 10 control control NN cord-000238-om92cx5q 135 11 populations population NNS cord-000238-om92cx5q 135 12 . . . cord-000238-om92cx5q 136 1 In in IN cord-000238-om92cx5q 136 2 contrast contrast NN cord-000238-om92cx5q 136 3 , , , cord-000238-om92cx5q 136 4 we -PRON- PRP cord-000238-om92cx5q 136 5 observed observe VBD cord-000238-om92cx5q 136 6 that that IN cord-000238-om92cx5q 136 7 all all DT cord-000238-om92cx5q 136 8 three three CD cord-000238-om92cx5q 136 9 lineages lineage NNS cord-000238-om92cx5q 136 10 in in IN cord-000238-om92cx5q 136 11 the the DT cord-000238-om92cx5q 136 12 high high JJ cord-000238-om92cx5q 136 13 dosage dosage NN cord-000238-om92cx5q 136 14 ͑15 ͑15 CD cord-000238-om92cx5q 136 15 min min NN cord-000238-om92cx5q 137 1 UVC UVC NNP cord-000238-om92cx5q 137 2 exposure͒ exposure͒ JJ cord-000238-om92cx5q 137 3 treatment treatment NN cord-000238-om92cx5q 137 4 went go VBD cord-000238-om92cx5q 137 5 extinct extinct JJ cord-000238-om92cx5q 137 6 by by IN cord-000238-om92cx5q 137 7 passage passage NN cord-000238-om92cx5q 137 8 10 10 CD cord-000238-om92cx5q 137 9 of of IN cord-000238-om92cx5q 137 10 the the DT cord-000238-om92cx5q 137 11 experiment experiment NN cord-000238-om92cx5q 137 12 ͑data ͑data . cord-000238-om92cx5q 138 1 not not RB cord-000238-om92cx5q 138 2 shown͒. shown͒. NNP cord-000238-om92cx5q 139 1 These these DT cord-000238-om92cx5q 139 2 data datum NNS cord-000238-om92cx5q 139 3 were be VBD cord-000238-om92cx5q 139 4 informative informative JJ cord-000238-om92cx5q 139 5 because because IN cord-000238-om92cx5q 139 6 they -PRON- PRP cord-000238-om92cx5q 139 7 indicated indicate VBD cord-000238-om92cx5q 139 8 that that IN cord-000238-om92cx5q 139 9 the the DT cord-000238-om92cx5q 139 10 strong strong JJ cord-000238-om92cx5q 139 11 selection selection NN cord-000238-om92cx5q 139 12 created create VBN cord-000238-om92cx5q 139 13 through through IN cord-000238-om92cx5q 139 14 high high JJ cord-000238-om92cx5q 139 15 dosage dosage NN cord-000238-om92cx5q 139 16 of of IN cord-000238-om92cx5q 139 17 UVC UVC NNP cord-000238-om92cx5q 139 18 exposure exposure NN cord-000238-om92cx5q 139 19 was be VBD cord-000238-om92cx5q 139 20 too too RB cord-000238-om92cx5q 139 21 overwhelming overwhelming JJ cord-000238-om92cx5q 139 22 for for IN cord-000238-om92cx5q 139 23 viruses virus NNS cord-000238-om92cx5q 139 24 to to TO cord-000238-om92cx5q 139 25 be be VB cord-000238-om92cx5q 139 26 ecologically ecologically RB cord-000238-om92cx5q 139 27 sustained sustain VBN cord-000238-om92cx5q 139 28 , , , cord-000238-om92cx5q 139 29 and/or and/or CC cord-000238-om92cx5q 139 30 to to TO cord-000238-om92cx5q 139 31 experience experience VB cord-000238-om92cx5q 139 32 spontaneous spontaneous JJ cord-000238-om92cx5q 139 33 genetic genetic JJ cord-000238-om92cx5q 139 34 variation variation NN cord-000238-om92cx5q 139 35 useful useful JJ cord-000238-om92cx5q 139 36 for for IN cord-000238-om92cx5q 139 37 meeting meet VBG cord-000238-om92cx5q 139 38 the the DT cord-000238-om92cx5q 139 39 environmental environmental JJ cord-000238-om92cx5q 139 40 challenge challenge NN cord-000238-om92cx5q 139 41 . . . cord-000238-om92cx5q 140 1 The the DT cord-000238-om92cx5q 140 2 latter latter JJ cord-000238-om92cx5q 140 3 outcome outcome NN cord-000238-om92cx5q 140 4 clearly clearly RB cord-000238-om92cx5q 140 5 demonstrated demonstrate VBD cord-000238-om92cx5q 140 6 an an DT cord-000238-om92cx5q 140 7 evolutionary evolutionary JJ cord-000238-om92cx5q 140 8 constraint constraint NN cord-000238-om92cx5q 140 9 for for IN cord-000238-om92cx5q 140 10 the the DT cord-000238-om92cx5q 140 11 virus virus NN cord-000238-om92cx5q 140 12 . . . cord-000238-om92cx5q 141 1 Last last RB cord-000238-om92cx5q 141 2 , , , cord-000238-om92cx5q 141 3 all all DT cord-000238-om92cx5q 141 4 of of IN cord-000238-om92cx5q 141 5 the the DT cord-000238-om92cx5q 141 6 evolved evolve VBN cord-000238-om92cx5q 141 7 populations population NNS cord-000238-om92cx5q 141 8 in in IN cord-000238-om92cx5q 141 9 the the DT cord-000238-om92cx5q 141 10 low low JJ cord-000238-om92cx5q 141 11 dosage dosage NN cord-000238-om92cx5q 141 12 ͑2.5 ͑2.5 NNP cord-000238-om92cx5q 141 13 min min NNP cord-000238-om92cx5q 141 14 UVC UVC NNP cord-000238-om92cx5q 141 15 exposure͒ exposure͒ JJ cord-000238-om92cx5q 141 16 treatment treatment NN cord-000238-om92cx5q 141 17 were be VBD cord-000238-om92cx5q 141 18 extant extant JJ cord-000238-om92cx5q 141 19 by by IN cord-000238-om92cx5q 141 20 end end NN cord-000238-om92cx5q 141 21 of of IN cord-000238-om92cx5q 141 22 the the DT cord-000238-om92cx5q 141 23 study study NN cord-000238-om92cx5q 141 24 . . . cord-000238-om92cx5q 142 1 However however RB cord-000238-om92cx5q 142 2 , , , cord-000238-om92cx5q 142 3 only only RB cord-000238-om92cx5q 142 4 one one CD cord-000238-om92cx5q 142 5 of of IN cord-000238-om92cx5q 142 6 these these DT cord-000238-om92cx5q 142 7 three three CD cord-000238-om92cx5q 142 8 populations population NNS cord-000238-om92cx5q 142 9 exhibited exhibit VBD cord-000238-om92cx5q 142 10 a a DT cord-000238-om92cx5q 142 11 death death NN cord-000238-om92cx5q 142 12 curve curve NN cord-000238-om92cx5q 142 13 that that WDT cord-000238-om92cx5q 142 14 differed differ VBD cord-000238-om92cx5q 142 15 from from IN cord-000238-om92cx5q 142 16 the the DT cord-000238-om92cx5q 142 17 ancestor ancestor NN cord-000238-om92cx5q 142 18 , , , cord-000238-om92cx5q 142 19 as as IN cord-000238-om92cx5q 142 20 shown show VBN cord-000238-om92cx5q 142 21 in in IN cord-000238-om92cx5q 142 22 Fig Fig NNP cord-000238-om92cx5q 142 23 . . . cord-000238-om92cx5q 143 1 2 2 LS cord-000238-om92cx5q 143 2 . . . cord-000238-om92cx5q 144 1 This this DT cord-000238-om92cx5q 144 2 result result NN cord-000238-om92cx5q 144 3 proved prove VBD cord-000238-om92cx5q 144 4 that that IN cord-000238-om92cx5q 144 5 a a DT cord-000238-om92cx5q 144 6 response response NN cord-000238-om92cx5q 144 7 to to IN cord-000238-om92cx5q 144 8 UVC UVC NNP cord-000238-om92cx5q 144 9 selection selection NN cord-000238-om92cx5q 144 10 was be VBD cord-000238-om92cx5q 144 11 possible possible JJ cord-000238-om92cx5q 144 12 in in IN cord-000238-om92cx5q 144 13 phage phage NN cord-000238-om92cx5q 144 14 6 6 CD cord-000238-om92cx5q 144 15 under under IN cord-000238-om92cx5q 144 16 our -PRON- PRP$ cord-000238-om92cx5q 144 17 low low JJ cord-000238-om92cx5q 144 18 dosage dosage NN cord-000238-om92cx5q 144 19 conditions condition NNS cord-000238-om92cx5q 144 20 . . . cord-000238-om92cx5q 145 1 Furthermore furthermore RB cord-000238-om92cx5q 145 2 , , , cord-000238-om92cx5q 145 3 the the DT cord-000238-om92cx5q 145 4 data datum NNS cord-000238-om92cx5q 145 5 interestingly interestingly RB cord-000238-om92cx5q 145 6 showed show VBD cord-000238-om92cx5q 145 7 that that IN cord-000238-om92cx5q 145 8 the the DT cord-000238-om92cx5q 145 9 adaptation adaptation NN cord-000238-om92cx5q 145 10 caused cause VBD cord-000238-om92cx5q 145 11 ϳ17 ϳ17 CD cord-000238-om92cx5q 145 12 % % NN cord-000238-om92cx5q 145 13 gain gain NN cord-000238-om92cx5q 145 14 in in IN cord-000238-om92cx5q 145 15 survival survival NN cord-000238-om92cx5q 145 16 ͑on ͑on NNP cord-000238-om92cx5q 146 1 average͒ average͒ JJ cord-000238-om92cx5q 146 2 relative relative JJ cord-000238-om92cx5q 146 3 to to IN cord-000238-om92cx5q 146 4 the the DT cord-000238-om92cx5q 146 5 ancestor ancestor NN cord-000238-om92cx5q 146 6 at at IN cord-000238-om92cx5q 146 7 dosages dosage NNS cord-000238-om92cx5q 146 8 away away RB cord-000238-om92cx5q 146 9 from from IN cord-000238-om92cx5q 146 10 the the DT cord-000238-om92cx5q 146 11 selection selection NN cord-000238-om92cx5q 146 12 challenge challenge NN cord-000238-om92cx5q 146 13 of of IN cord-000238-om92cx5q 146 14 2.5 2.5 CD cord-000238-om92cx5q 146 15 min min NN cord-000238-om92cx5q 146 16 ͑i.e ͑i.e NFP cord-000238-om92cx5q 146 17 . . . cord-000238-om92cx5q 147 1 , , , cord-000238-om92cx5q 147 2 1 1 CD cord-000238-om92cx5q 147 3 , , , cord-000238-om92cx5q 147 4 5 5 CD cord-000238-om92cx5q 147 5 , , , cord-000238-om92cx5q 147 6 10 10 CD cord-000238-om92cx5q 147 7 , , , cord-000238-om92cx5q 147 8 and and CC cord-000238-om92cx5q 147 9 15 15 CD cord-000238-om92cx5q 147 10 min͒. min͒. . cord-000238-om92cx5q 147 11 However however RB cord-000238-om92cx5q 147 12 , , , cord-000238-om92cx5q 147 13 this this DT cord-000238-om92cx5q 147 14 response response NN cord-000238-om92cx5q 147 15 on on IN cord-000238-om92cx5q 147 16 the the DT cord-000238-om92cx5q 147 17 part part NN cord-000238-om92cx5q 147 18 of of IN cord-000238-om92cx5q 147 19 the the DT cord-000238-om92cx5q 147 20 one one CD cord-000238-om92cx5q 147 21 lineage lineage NN cord-000238-om92cx5q 147 22 was be VBD cord-000238-om92cx5q 147 23 not not RB cord-000238-om92cx5q 147 24 overly overly RB cord-000238-om92cx5q 147 25 impressive impressive JJ cord-000238-om92cx5q 147 26 , , , cord-000238-om92cx5q 147 27 because because IN cord-000238-om92cx5q 147 28 the the DT cord-000238-om92cx5q 147 29 same same JJ cord-000238-om92cx5q 147 30 50 50 CD cord-000238-om92cx5q 147 31 % % NN cord-000238-om92cx5q 147 32 mortality mortality NN cord-000238-om92cx5q 147 33 as as IN cord-000238-om92cx5q 147 34 the the DT cord-000238-om92cx5q 147 35 ancestor ancestor NN cord-000238-om92cx5q 147 36 was be VBD cord-000238-om92cx5q 147 37 evident evident JJ cord-000238-om92cx5q 147 38 under under IN cord-000238-om92cx5q 147 39 30 30 CD cord-000238-om92cx5q 147 40 min min NN cord-000238-om92cx5q 147 41 UVC UVC NNP cord-000238-om92cx5q 147 42 exposure exposure NN cord-000238-om92cx5q 147 43 , , , cord-000238-om92cx5q 147 44 demonstrating demonstrate VBG cord-000238-om92cx5q 147 45 an an DT cord-000238-om92cx5q 147 46 additional additional JJ cord-000238-om92cx5q 147 47 constraint constraint NN cord-000238-om92cx5q 147 48 in in IN cord-000238-om92cx5q 147 49 the the DT cord-000238-om92cx5q 147 50 virus virus NN cord-000238-om92cx5q 147 51 even even RB cord-000238-om92cx5q 147 52 though though IN cord-000238-om92cx5q 147 53 an an DT cord-000238-om92cx5q 147 54 adaptive adaptive JJ cord-000238-om92cx5q 147 55 response response NN cord-000238-om92cx5q 147 56 occurred occur VBD cord-000238-om92cx5q 147 57 at at IN cord-000238-om92cx5q 147 58 low low JJ cord-000238-om92cx5q 147 59 dosage dosage NN cord-000238-om92cx5q 147 60 ͑Fig ͑fig CD cord-000238-om92cx5q 147 61 . . . cord-000238-om92cx5q 147 62 2͒. 2͒. CD cord-000238-om92cx5q 148 1 Given give VBN cord-000238-om92cx5q 148 2 the the DT cord-000238-om92cx5q 148 3 overall overall JJ cord-000238-om92cx5q 148 4 modest modest JJ cord-000238-om92cx5q 148 5 response response NN cord-000238-om92cx5q 148 6 in in IN cord-000238-om92cx5q 148 7 phage phage NN cord-000238-om92cx5q 148 8 6 6 CD cord-000238-om92cx5q 148 9 populations population NNS cord-000238-om92cx5q 148 10 subjected subject VBN cord-000238-om92cx5q 148 11 to to IN cord-000238-om92cx5q 148 12 strong strong JJ cord-000238-om92cx5q 148 13 selection selection NN cord-000238-om92cx5q 148 14 for for IN cord-000238-om92cx5q 148 15 changes change NNS cord-000238-om92cx5q 148 16 in in IN cord-000238-om92cx5q 148 17 the the DT cord-000238-om92cx5q 148 18 UVC UVC NNP cord-000238-om92cx5q 148 19 survival survival NN cord-000238-om92cx5q 148 20 phenotype phenotype NN cord-000238-om92cx5q 148 21 , , , cord-000238-om92cx5q 148 22 the the DT cord-000238-om92cx5q 148 23 available available JJ cord-000238-om92cx5q 148 24 evidence evidence NN cord-000238-om92cx5q 148 25 strongly strongly RB cord-000238-om92cx5q 148 26 suggests suggest VBZ cord-000238-om92cx5q 148 27 that that IN cord-000238-om92cx5q 148 28 pre pre JJ cord-000238-om92cx5q 148 29 - - JJ cord-000238-om92cx5q 148 30 existing existing JJ cord-000238-om92cx5q 148 31 constraints constraint NNS cord-000238-om92cx5q 148 32 prevent prevent VBP cord-000238-om92cx5q 148 33 the the DT cord-000238-om92cx5q 148 34 virus virus NN cord-000238-om92cx5q 148 35 from from IN cord-000238-om92cx5q 148 36 easily easily RB cord-000238-om92cx5q 148 37 adapting adapt VBG cord-000238-om92cx5q 148 38 . . . cord-000238-om92cx5q 149 1 Thus thus RB cord-000238-om92cx5q 149 2 , , , cord-000238-om92cx5q 149 3 we -PRON- PRP cord-000238-om92cx5q 149 4 did do VBD cord-000238-om92cx5q 149 5 not not RB cord-000238-om92cx5q 149 6 observe observe VB cord-000238-om92cx5q 149 7 adaptive adaptive JJ cord-000238-om92cx5q 149 8 increases increase NNS cord-000238-om92cx5q 149 9 in in IN cord-000238-om92cx5q 149 10 virus virus NN cord-000238-om92cx5q 149 11 resistance resistance NN cord-000238-om92cx5q 149 12 to to IN cord-000238-om92cx5q 149 13 UV uv NN cord-000238-om92cx5q 149 14 degradation degradation NN cord-000238-om92cx5q 149 15 , , , cord-000238-om92cx5q 149 16 presumably presumably RB cord-000238-om92cx5q 149 17 involving involve VBG cord-000238-om92cx5q 149 18 mutagenesis mutagenesis NN cord-000238-om92cx5q 149 19 . . . cord-000238-om92cx5q 150 1 However however RB cord-000238-om92cx5q 150 2 , , , cord-000238-om92cx5q 150 3 the the DT cord-000238-om92cx5q 150 4 experimental experimental JJ cord-000238-om92cx5q 150 5 evolution evolution NN cord-000238-om92cx5q 150 6 was be VBD cord-000238-om92cx5q 150 7 of of IN cord-000238-om92cx5q 150 8 relatively relatively RB cord-000238-om92cx5q 150 9 short short JJ cord-000238-om92cx5q 150 10 duration duration NN cord-000238-om92cx5q 150 11 , , , cord-000238-om92cx5q 150 12 and and CC cord-000238-om92cx5q 150 13 additional additional JJ cord-000238-om92cx5q 150 14 selection selection NN cord-000238-om92cx5q 150 15 might may MD cord-000238-om92cx5q 150 16 produce produce VB cord-000238-om92cx5q 150 17 adaptive adaptive JJ cord-000238-om92cx5q 150 18 resistance resistance NN cord-000238-om92cx5q 150 19 to to IN cord-000238-om92cx5q 150 20 UVC UVC NNP cord-000238-om92cx5q 150 21 damage damage NN cord-000238-om92cx5q 150 22 . . . cord-000238-om92cx5q 151 1 Nevertheless nevertheless RB cord-000238-om92cx5q 151 2 , , , cord-000238-om92cx5q 151 3 a a DT cord-000238-om92cx5q 151 4 lack lack NN cord-000238-om92cx5q 151 5 of of IN cord-000238-om92cx5q 151 6 adaptive adaptive JJ cord-000238-om92cx5q 151 7 response response NN cord-000238-om92cx5q 151 8 may may MD cord-000238-om92cx5q 151 9 be be VB cord-000238-om92cx5q 151 10 unsurprising unsurprising JJ cord-000238-om92cx5q 151 11 in in IN cord-000238-om92cx5q 151 12 phage phage NN cord-000238-om92cx5q 151 13 6 6 CD cord-000238-om92cx5q 151 14 , , , cord-000238-om92cx5q 151 15 because because IN cord-000238-om92cx5q 151 16 elsewhere elsewhere RB cord-000238-om92cx5q 151 17 we -PRON- PRP cord-000238-om92cx5q 151 18 showed show VBD cord-000238-om92cx5q 151 19 that that IN cord-000238-om92cx5q 151 20 genetically genetically RB cord-000238-om92cx5q 151 21 robust robust JJ cord-000238-om92cx5q 151 22 and and CC cord-000238-om92cx5q 151 23 brittle brittle JJ cord-000238-om92cx5q 151 24 strains strain NNS cord-000238-om92cx5q 151 25 of of IN cord-000238-om92cx5q 151 26 the the DT cord-000238-om92cx5q 151 27 virus virus NN cord-000238-om92cx5q 151 28 generated generate VBN cord-000238-om92cx5q 151 29 in in IN cord-000238-om92cx5q 151 30 the the DT cord-000238-om92cx5q 151 31 aforementioned aforementioned JJ cord-000238-om92cx5q 151 32 MOI MOI NNP cord-000238-om92cx5q 151 33 experiment experiment NN cord-000238-om92cx5q 151 34 did do VBD cord-000238-om92cx5q 151 35 not not RB cord-000238-om92cx5q 151 36 statistically statistically RB cord-000238-om92cx5q 151 37 differ differ VB cord-000238-om92cx5q 151 38 when when WRB cord-000238-om92cx5q 151 39 assayed assay VBN cord-000238-om92cx5q 151 40 for for IN cord-000238-om92cx5q 151 41 UVC uvc NN cord-000238-om92cx5q 151 42 survival survival NN cord-000238-om92cx5q 151 43 . . . cord-000238-om92cx5q 152 1 16 16 CD cord-000238-om92cx5q 153 1 Thus thus RB cord-000238-om92cx5q 153 2 , , , cord-000238-om92cx5q 153 3 neither neither CC cord-000238-om92cx5q 153 4 direct direct JJ cord-000238-om92cx5q 153 5 selection selection NN cord-000238-om92cx5q 153 6 ͑current ͑current . cord-000238-om92cx5q 154 1 findings͒ findings͒ JJ cord-000238-om92cx5q 154 2 nor nor CC cord-000238-om92cx5q 154 3 indirect indirect JJ cord-000238-om92cx5q 154 4 selection selection NN cord-000238-om92cx5q 154 5 for for IN cord-000238-om92cx5q 154 6 robustness robustness NN cord-000238-om92cx5q 154 7 against against IN cord-000238-om92cx5q 154 8 UVC UVC NNP cord-000238-om92cx5q 154 9 damage damage NN cord-000238-om92cx5q 154 10 was be VBD cord-000238-om92cx5q 154 11 evident evident JJ cord-000238-om92cx5q 154 12 in in IN cord-000238-om92cx5q 154 13 this this DT cord-000238-om92cx5q 154 14 study study NN cord-000238-om92cx5q 154 15 system system NN cord-000238-om92cx5q 154 16 . . . cord-000238-om92cx5q 155 1 These these DT cord-000238-om92cx5q 155 2 observations observation NNS cord-000238-om92cx5q 155 3 may may MD cord-000238-om92cx5q 155 4 be be VB cord-000238-om92cx5q 155 5 explained explain VBN cord-000238-om92cx5q 155 6 by by IN cord-000238-om92cx5q 155 7 a a DT cord-000238-om92cx5q 155 8 relatively relatively RB cord-000238-om92cx5q 155 9 high high JJ cord-000238-om92cx5q 155 10 level level NN cord-000238-om92cx5q 155 11 of of IN cord-000238-om92cx5q 155 12 robustness robustness NN cord-000238-om92cx5q 155 13 to to IN cord-000238-om92cx5q 155 14 UV uv NN cord-000238-om92cx5q 155 15 damage damage NN cord-000238-om92cx5q 155 16 in in IN cord-000238-om92cx5q 155 17 phage phage NN cord-000238-om92cx5q 155 18 6 6 CD cord-000238-om92cx5q 155 19 , , , cord-000238-om92cx5q 155 20 which which WDT cord-000238-om92cx5q 155 21 has have VBZ cord-000238-om92cx5q 155 22 already already RB cord-000238-om92cx5q 155 23 run run VBN cord-000238-om92cx5q 155 24 the the DT cord-000238-om92cx5q 155 25 gamut gamut NN cord-000238-om92cx5q 155 26 of of IN cord-000238-om92cx5q 155 27 selection selection NN cord-000238-om92cx5q 155 28 , , , cord-000238-om92cx5q 155 29 creating create VBG cord-000238-om92cx5q 155 30 a a DT cord-000238-om92cx5q 155 31 constraint constraint NN cord-000238-om92cx5q 155 32 for for IN cord-000238-om92cx5q 155 33 the the DT cord-000238-om92cx5q 155 34 virus virus NN cord-000238-om92cx5q 155 35 to to TO cord-000238-om92cx5q 155 36 improve improve VB cord-000238-om92cx5q 155 37 any any DT cord-000238-om92cx5q 155 38 further further RB cord-000238-om92cx5q 155 39 . . . cord-000238-om92cx5q 156 1 One one CD cord-000238-om92cx5q 156 2 ecological ecological JJ cord-000238-om92cx5q 156 3 explanation explanation NN cord-000238-om92cx5q 156 4 may may MD cord-000238-om92cx5q 156 5 be be VB cord-000238-om92cx5q 156 6 that that IN cord-000238-om92cx5q 156 7 the the DT cord-000238-om92cx5q 156 8 virus virus NN cord-000238-om92cx5q 156 9 naturally naturally RB cord-000238-om92cx5q 156 10 infects infect VBZ cord-000238-om92cx5q 156 11 plant plant NN cord-000238-om92cx5q 156 12 pathogenic pathogenic JJ cord-000238-om92cx5q 156 13 bacteria bacteria NNS cord-000238-om92cx5q 156 14 that that WDT cord-000238-om92cx5q 156 15 colonize colonize VBP cord-000238-om92cx5q 156 16 leaf leaf NN cord-000238-om92cx5q 156 17 surfaces surface NNS cord-000238-om92cx5q 156 18 , , , cord-000238-om92cx5q 156 19 37 37 CD cord-000238-om92cx5q 156 20 suggesting suggest VBG cord-000238-om92cx5q 156 21 that that IN cord-000238-om92cx5q 156 22 prior prior JJ cord-000238-om92cx5q 156 23 adaptation adaptation NN cord-000238-om92cx5q 156 24 to to TO cord-000238-om92cx5q 156 25 resist resist VB cord-000238-om92cx5q 156 26 UV uv NN cord-000238-om92cx5q 156 27 damage damage NN cord-000238-om92cx5q 156 28 might may MD cord-000238-om92cx5q 156 29 have have VB cord-000238-om92cx5q 156 30 precluded preclude VBN cord-000238-om92cx5q 156 31 observations observation NNS cord-000238-om92cx5q 156 32 of of IN cord-000238-om92cx5q 156 33 further further JJ cord-000238-om92cx5q 156 34 adaptive adaptive JJ cord-000238-om92cx5q 156 35 response response NN cord-000238-om92cx5q 156 36 in in IN cord-000238-om92cx5q 156 37 the the DT cord-000238-om92cx5q 156 38 laboratory laboratory NN cord-000238-om92cx5q 156 39 . . . cord-000238-om92cx5q 157 1 This this DT cord-000238-om92cx5q 157 2 study study NN cord-000238-om92cx5q 157 3 reveals reveal VBZ cord-000238-om92cx5q 157 4 the the DT cord-000238-om92cx5q 157 5 potential potential JJ cord-000238-om92cx5q 157 6 pitfalls pitfall NNS cord-000238-om92cx5q 157 7 to to IN cord-000238-om92cx5q 157 8 overinterpreting overinterprete VBG cord-000238-om92cx5q 157 9 empirical empirical JJ cord-000238-om92cx5q 157 10 results result NNS cord-000238-om92cx5q 157 11 in in IN cord-000238-om92cx5q 157 12 the the DT cord-000238-om92cx5q 157 13 attempt attempt NN cord-000238-om92cx5q 157 14 to to TO cord-000238-om92cx5q 157 15 study study VB cord-000238-om92cx5q 157 16 robustness robustness NN cord-000238-om92cx5q 157 17 . . . cord-000238-om92cx5q 158 1 First first RB cord-000238-om92cx5q 158 2 , , , cord-000238-om92cx5q 158 3 claiming claim VBG cord-000238-om92cx5q 158 4 that that IN cord-000238-om92cx5q 158 5 an an DT cord-000238-om92cx5q 158 6 organism organism NN cord-000238-om92cx5q 158 7 has have VBZ cord-000238-om92cx5q 158 8 directly directly RB cord-000238-om92cx5q 158 9 evolved evolve VBN cord-000238-om92cx5q 158 10 robustness robustness VB cord-000238-om92cx5q 158 11 through through IN cord-000238-om92cx5q 158 12 natural natural JJ cord-000238-om92cx5q 158 13 selection selection NN cord-000238-om92cx5q 158 14 requires require VBZ cord-000238-om92cx5q 158 15 a a DT cord-000238-om92cx5q 158 16 nuanced nuanced JJ cord-000238-om92cx5q 158 17 understanding understanding NN cord-000238-om92cx5q 158 18 of of IN cord-000238-om92cx5q 158 19 how how WRB cord-000238-om92cx5q 158 20 a a DT cord-000238-om92cx5q 158 21 given give VBN cord-000238-om92cx5q 158 22 environmental environmental JJ cord-000238-om92cx5q 158 23 stressor stressor NN cord-000238-om92cx5q 158 24 impacts impact VBZ cord-000238-om92cx5q 158 25 an an DT cord-000238-om92cx5q 158 26 evolvable evolvable JJ cord-000238-om92cx5q 158 27 entity entity NN cord-000238-om92cx5q 158 28 . . . cord-000238-om92cx5q 159 1 Such such JJ cord-000238-om92cx5q 159 2 knowledge knowledge NN cord-000238-om92cx5q 159 3 can can MD cord-000238-om92cx5q 159 4 be be VB cord-000238-om92cx5q 159 5 dubious dubious JJ cord-000238-om92cx5q 159 6 in in IN cord-000238-om92cx5q 159 7 the the DT cord-000238-om92cx5q 159 8 RNA RNA NNP cord-000238-om92cx5q 159 9 virus virus NN cord-000238-om92cx5q 159 10 context context NN cord-000238-om92cx5q 159 11 , , , cord-000238-om92cx5q 159 12 as as IN cord-000238-om92cx5q 159 13 stressors stressor NNS cord-000238-om92cx5q 159 14 such such JJ cord-000238-om92cx5q 159 15 as as IN cord-000238-om92cx5q 159 16 UVC UVC NNP cord-000238-om92cx5q 159 17 might may MD cord-000238-om92cx5q 159 18 impact impact VB cord-000238-om92cx5q 159 19 RNA RNA NNP cord-000238-om92cx5q 159 20 viruses virus NNS cord-000238-om92cx5q 159 21 in in IN cord-000238-om92cx5q 159 22 multiple multiple JJ cord-000238-om92cx5q 159 23 ways way NNS cord-000238-om92cx5q 159 24 . . . cord-000238-om92cx5q 160 1 [ [ -LRB- cord-000238-om92cx5q 160 2 30 30 CD cord-000238-om92cx5q 160 3 ] ] -RRB- cord-000238-om92cx5q 160 4 [ [ -LRB- cord-000238-om92cx5q 160 5 31 31 CD cord-000238-om92cx5q 160 6 ] ] -RRB- cord-000238-om92cx5q 160 7 [ [ -LRB- cord-000238-om92cx5q 160 8 32 32 CD cord-000238-om92cx5q 160 9 ] ] -RRB- cord-000238-om92cx5q 161 1 Even even RB cord-000238-om92cx5q 161 2 further far RBR cord-000238-om92cx5q 161 3 , , , cord-000238-om92cx5q 161 4 if if IN cord-000238-om92cx5q 161 5 a a DT cord-000238-om92cx5q 161 6 test test NN cord-000238-om92cx5q 161 7 population population NN cord-000238-om92cx5q 161 8 evolves evolve VBZ cord-000238-om92cx5q 161 9 an an DT cord-000238-om92cx5q 161 10 adaptive adaptive JJ cord-000238-om92cx5q 161 11 response response NN cord-000238-om92cx5q 161 12 to to IN cord-000238-om92cx5q 161 13 an an DT cord-000238-om92cx5q 161 14 environmental environmental JJ cord-000238-om92cx5q 161 15 challenge challenge NN cord-000238-om92cx5q 161 16 , , , cord-000238-om92cx5q 161 17 one one PRP cord-000238-om92cx5q 161 18 has have VBZ cord-000238-om92cx5q 161 19 to to TO cord-000238-om92cx5q 161 20 be be VB cord-000238-om92cx5q 161 21 cautious cautious JJ cord-000238-om92cx5q 161 22 in in IN cord-000238-om92cx5q 161 23 distinguishing distinguish VBG cord-000238-om92cx5q 161 24 resistance resistance NN cord-000238-om92cx5q 161 25 from from IN cord-000238-om92cx5q 161 26 robustness robustness NN cord-000238-om92cx5q 161 27 . . . cord-000238-om92cx5q 162 1 While while IN cord-000238-om92cx5q 162 2 both both DT cord-000238-om92cx5q 162 3 involve involve VBP cord-000238-om92cx5q 162 4 the the DT cord-000238-om92cx5q 162 5 ability ability NN cord-000238-om92cx5q 162 6 to to TO cord-000238-om92cx5q 162 7 withstand withstand VB cord-000238-om92cx5q 162 8 the the DT cord-000238-om92cx5q 162 9 influence influence NN cord-000238-om92cx5q 162 10 of of IN cord-000238-om92cx5q 162 11 perturbations perturbation NNS cord-000238-om92cx5q 162 12 , , , cord-000238-om92cx5q 162 13 robustness robustness NN cord-000238-om92cx5q 162 14 describes describe VBZ cord-000238-om92cx5q 162 15 a a DT cord-000238-om92cx5q 162 16 more more RBR cord-000238-om92cx5q 162 17 generalized generalized JJ cord-000238-om92cx5q 162 18 response response NN cord-000238-om92cx5q 162 19 that that WDT cord-000238-om92cx5q 162 20 affects affect VBZ cord-000238-om92cx5q 162 21 performance performance NN cord-000238-om92cx5q 162 22 in in IN cord-000238-om92cx5q 162 23 multiple multiple JJ cord-000238-om92cx5q 162 24 environments environment NNS cord-000238-om92cx5q 162 25 1,2 1,2 CD cord-000238-om92cx5q 162 26 and and CC cord-000238-om92cx5q 162 27 evolvability evolvability NN cord-000238-om92cx5q 162 28 . . . cord-000238-om92cx5q 163 1 15 15 CD cord-000238-om92cx5q 163 2 , , , cord-000238-om92cx5q 163 3 16 16 CD cord-000238-om92cx5q 163 4 _SP cord-000238-om92cx5q 164 1 The the DT cord-000238-om92cx5q 164 2 existing exist VBG cord-000238-om92cx5q 164 3 empirical empirical JJ cord-000238-om92cx5q 164 4 evidence evidence NN cord-000238-om92cx5q 164 5 for for IN cord-000238-om92cx5q 164 6 evolved evolved JJ cord-000238-om92cx5q 164 7 changes change NNS cord-000238-om92cx5q 164 8 and and CC cord-000238-om92cx5q 164 9 selective selective JJ cord-000238-om92cx5q 164 10 advantages advantage NNS cord-000238-om92cx5q 164 11 in in IN cord-000238-om92cx5q 164 12 robustness robustness NN cord-000238-om92cx5q 164 13 reinforces reinforce VBZ cord-000238-om92cx5q 164 14 the the DT cord-000238-om92cx5q 164 15 importance importance NN cord-000238-om92cx5q 164 16 of of IN cord-000238-om92cx5q 164 17 microbial microbial JJ cord-000238-om92cx5q 164 18 systems system NNS cord-000238-om92cx5q 164 19 in in IN cord-000238-om92cx5q 164 20 the the DT cord-000238-om92cx5q 164 21 study study NN cord-000238-om92cx5q 164 22 of of IN cord-000238-om92cx5q 164 23 evolutionary evolutionary JJ cord-000238-om92cx5q 164 24 biology biology NN cord-000238-om92cx5q 164 25 . . . cord-000238-om92cx5q 165 1 But but CC cord-000238-om92cx5q 165 2 later later RB cord-000238-om92cx5q 165 3 work work NN cord-000238-om92cx5q 165 4 examining examine VBG cord-000238-om92cx5q 165 5 the the DT cord-000238-om92cx5q 165 6 relationship relationship NN cord-000238-om92cx5q 165 7 between between IN cord-000238-om92cx5q 165 8 robustness robustness NN cord-000238-om92cx5q 165 9 and and CC cord-000238-om92cx5q 165 10 evolvability evolvability NN cord-000238-om92cx5q 165 11 is be VBZ cord-000238-om92cx5q 165 12 perhaps perhaps RB cord-000238-om92cx5q 165 13 even even RB cord-000238-om92cx5q 165 14 more more RBR cord-000238-om92cx5q 165 15 relevant relevant JJ cord-000238-om92cx5q 165 16 for for IN cord-000238-om92cx5q 165 17 elucidating elucidate VBG cord-000238-om92cx5q 165 18 how how WRB cord-000238-om92cx5q 165 19 infectious infectious JJ cord-000238-om92cx5q 165 20 diseases disease NNS cord-000238-om92cx5q 165 21 evolve evolve VBP cord-000238-om92cx5q 165 22 . . . cord-000238-om92cx5q 166 1 On on IN cord-000238-om92cx5q 166 2 the the DT cord-000238-om92cx5q 166 3 one one CD cord-000238-om92cx5q 166 4 hand hand NN cord-000238-om92cx5q 166 5 , , , cord-000238-om92cx5q 166 6 the the DT cord-000238-om92cx5q 166 7 ability ability NN cord-000238-om92cx5q 166 8 for for IN cord-000238-om92cx5q 166 9 robustness robustness NN cord-000238-om92cx5q 166 10 to to TO cord-000238-om92cx5q 166 11 allow allow VB cord-000238-om92cx5q 166 12 phenotypic phenotypic JJ cord-000238-om92cx5q 166 13 constancy constancy NN cord-000238-om92cx5q 166 14 in in IN cord-000238-om92cx5q 166 15 the the DT cord-000238-om92cx5q 166 16 face face NN cord-000238-om92cx5q 166 17 of of IN cord-000238-om92cx5q 166 18 environmental environmental JJ cord-000238-om92cx5q 166 19 and and CC cord-000238-om92cx5q 166 20 mutational mutational JJ cord-000238-om92cx5q 166 21 perturbation perturbation NN cord-000238-om92cx5q 166 22 provides provide VBZ cord-000238-om92cx5q 166 23 obvious obvious JJ cord-000238-om92cx5q 166 24 benefits benefit NNS cord-000238-om92cx5q 166 25 , , , cord-000238-om92cx5q 166 26 such such JJ cord-000238-om92cx5q 166 27 as as IN cord-000238-om92cx5q 166 28 reliable reliable JJ cord-000238-om92cx5q 166 29 cellular cellular JJ cord-000238-om92cx5q 166 30 function function NN cord-000238-om92cx5q 166 31 , , , cord-000238-om92cx5q 166 32 individual individual JJ cord-000238-om92cx5q 166 33 development development NN cord-000238-om92cx5q 166 34 , , , cord-000238-om92cx5q 166 35 and and CC cord-000238-om92cx5q 166 36 offspring offspring NN cord-000238-om92cx5q 166 37 reproduction reproduction NN cord-000238-om92cx5q 166 38 . . . cord-000238-om92cx5q 167 1 However however RB cord-000238-om92cx5q 167 2 , , , cord-000238-om92cx5q 167 3 rigidity rigidity NN cord-000238-om92cx5q 167 4 in in IN cord-000238-om92cx5q 167 5 the the DT cord-000238-om92cx5q 167 6 face face NN cord-000238-om92cx5q 167 7 of of IN cord-000238-om92cx5q 167 8 change change NN cord-000238-om92cx5q 167 9 may may MD cord-000238-om92cx5q 167 10 pose pose VB cord-000238-om92cx5q 167 11 problems problem NNS cord-000238-om92cx5q 167 12 ; ; : cord-000238-om92cx5q 167 13 because because IN cord-000238-om92cx5q 167 14 natural natural JJ cord-000238-om92cx5q 167 15 selection selection NN cord-000238-om92cx5q 167 16 acts act NNS cord-000238-om92cx5q 167 17 on on IN cord-000238-om92cx5q 167 18 phenotypic phenotypic JJ cord-000238-om92cx5q 167 19 variation variation NN cord-000238-om92cx5q 167 20 , , , cord-000238-om92cx5q 167 21 robustness robustness NN cord-000238-om92cx5q 167 22 that that IN cord-000238-om92cx5q 167 23 buffers buffer NNS cord-000238-om92cx5q 167 24 this this DT cord-000238-om92cx5q 167 25 variation variation NN cord-000238-om92cx5q 167 26 could could MD cord-000238-om92cx5q 167 27 impede impede VB cord-000238-om92cx5q 167 28 evolution evolution NN cord-000238-om92cx5q 167 29 by by IN cord-000238-om92cx5q 167 30 natural natural JJ cord-000238-om92cx5q 167 31 selection selection NN cord-000238-om92cx5q 167 32 . . . cord-000238-om92cx5q 168 1 These these DT cord-000238-om92cx5q 168 2 conflicting conflict VBG cord-000238-om92cx5q 168 3 necessities necessity NNS cord-000238-om92cx5q 168 4 force force VBP cord-000238-om92cx5q 168 5 organisms organism NNS cord-000238-om92cx5q 168 6 to to TO cord-000238-om92cx5q 168 7 strike strike VB cord-000238-om92cx5q 168 8 a a DT cord-000238-om92cx5q 168 9 balance balance NN cord-000238-om92cx5q 168 10 between between IN cord-000238-om92cx5q 168 11 robustness robustness NN cord-000238-om92cx5q 168 12 and and CC cord-000238-om92cx5q 168 13 evolvability evolvability NN cord-000238-om92cx5q 168 14 , , , cord-000238-om92cx5q 168 15 the the DT cord-000238-om92cx5q 168 16 capacity capacity NN cord-000238-om92cx5q 168 17 to to TO cord-000238-om92cx5q 168 18 adapt adapt VB cord-000238-om92cx5q 168 19 . . . cord-000238-om92cx5q 169 1 By by IN cord-000238-om92cx5q 169 2 examining examine VBG cord-000238-om92cx5q 169 3 this this DT cord-000238-om92cx5q 169 4 balancing balancing NN cord-000238-om92cx5q 169 5 act act NN cord-000238-om92cx5q 169 6 , , , cord-000238-om92cx5q 169 7 we -PRON- PRP cord-000238-om92cx5q 169 8 may may MD cord-000238-om92cx5q 169 9 learn learn VB cord-000238-om92cx5q 169 10 whether whether IN cord-000238-om92cx5q 169 11 evolvability evolvability NN cord-000238-om92cx5q 169 12 can can MD cord-000238-om92cx5q 169 13 itself -PRON- PRP cord-000238-om92cx5q 169 14 evolve evolve VB cord-000238-om92cx5q 169 15 ; ; , cord-000238-om92cx5q 169 16 i.e. i.e. FW cord-000238-om92cx5q 169 17 , , , cord-000238-om92cx5q 169 18 whether whether IN cord-000238-om92cx5q 169 19 natural natural JJ cord-000238-om92cx5q 169 20 selection selection NN cord-000238-om92cx5q 169 21 can can MD cord-000238-om92cx5q 169 22 exert exert VB cord-000238-om92cx5q 169 23 a a DT cord-000238-om92cx5q 169 24 second second JJ cord-000238-om92cx5q 169 25 - - HYPH cord-000238-om92cx5q 169 26 degree degree NN cord-000238-om92cx5q 169 27 effect effect NN cord-000238-om92cx5q 169 28 on on IN cord-000238-om92cx5q 169 29 evolution evolution NN cord-000238-om92cx5q 169 30 . . . cord-000238-om92cx5q 170 1 Below below IN cord-000238-om92cx5q 170 2 we -PRON- PRP cord-000238-om92cx5q 170 3 briefly briefly RB cord-000238-om92cx5q 170 4 describe describe VBP cord-000238-om92cx5q 170 5 two two CD cord-000238-om92cx5q 170 6 recent recent JJ cord-000238-om92cx5q 170 7 experiments experiment NNS cord-000238-om92cx5q 170 8 on on IN cord-000238-om92cx5q 170 9 the the DT cord-000238-om92cx5q 170 10 relationship relationship NN cord-000238-om92cx5q 170 11 between between IN cord-000238-om92cx5q 170 12 robustness robustness NN cord-000238-om92cx5q 170 13 and and CC cord-000238-om92cx5q 170 14 evolvability evolvability NN cord-000238-om92cx5q 170 15 . . . cord-000238-om92cx5q 171 1 One one CD cord-000238-om92cx5q 171 2 experiment experiment NN cord-000238-om92cx5q 171 3 showed show VBD cord-000238-om92cx5q 171 4 that that IN cord-000238-om92cx5q 171 5 genetic genetic JJ cord-000238-om92cx5q 171 6 robustness robustness NN cord-000238-om92cx5q 171 7 improved improve VBD cord-000238-om92cx5q 171 8 evolvability evolvability NN cord-000238-om92cx5q 171 9 of of IN cord-000238-om92cx5q 171 10 phage phage NN cord-000238-om92cx5q 171 11 6 6 CD cord-000238-om92cx5q 171 12 populations population NNS cord-000238-om92cx5q 171 13 when when WRB cord-000238-om92cx5q 171 14 heat heat NN cord-000238-om92cx5q 171 15 shock shock NN cord-000238-om92cx5q 171 16 was be VBD cord-000238-om92cx5q 171 17 used use VBN cord-000238-om92cx5q 171 18 as as IN cord-000238-om92cx5q 171 19 an an DT cord-000238-om92cx5q 171 20 adaptive adaptive JJ cord-000238-om92cx5q 171 21 challenge challenge NN cord-000238-om92cx5q 171 22 . . . cord-000238-om92cx5q 172 1 15 15 CD cord-000238-om92cx5q 172 2 Phage Phage NNP cord-000238-om92cx5q 172 3 6 6 CD cord-000238-om92cx5q 172 4 is be VBZ cord-000238-om92cx5q 172 5 typically typically RB cord-000238-om92cx5q 172 6 cultured culture VBN cord-000238-om92cx5q 172 7 at at IN cord-000238-om92cx5q 172 8 25 25 CD cord-000238-om92cx5q 172 9 ° ° NN cord-000238-om92cx5q 172 10 C c NN cord-000238-om92cx5q 172 11 , , , cord-000238-om92cx5q 172 12 and and CC cord-000238-om92cx5q 172 13 exposure exposure NN cord-000238-om92cx5q 172 14 to to IN cord-000238-om92cx5q 172 15 45 45 CD cord-000238-om92cx5q 172 16 ° ° NN cord-000238-om92cx5q 172 17 C c NN cord-000238-om92cx5q 172 18 heat heat NN cord-000238-om92cx5q 172 19 shock shock NN cord-000238-om92cx5q 172 20 for for IN cord-000238-om92cx5q 172 21 as as RB cord-000238-om92cx5q 172 22 little little JJ cord-000238-om92cx5q 172 23 as as IN cord-000238-om92cx5q 172 24 5 5 CD cord-000238-om92cx5q 172 25 min min NN cord-000238-om92cx5q 172 26 leads lead VBZ cord-000238-om92cx5q 172 27 to to IN cord-000238-om92cx5q 172 28 ϳ20 ϳ20 CD cord-000238-om92cx5q 172 29 % % NN cord-000238-om92cx5q 172 30 survival survival NN cord-000238-om92cx5q 172 31 ͑%S͒ ͑%S͒ , cord-000238-om92cx5q 172 32 in in IN cord-000238-om92cx5q 172 33 populations population NNS cord-000238-om92cx5q 172 34 of of IN cord-000238-om92cx5q 172 35 the the DT cord-000238-om92cx5q 172 36 virus virus NN cord-000238-om92cx5q 172 37 . . . cord-000238-om92cx5q 173 1 Robust robust JJ cord-000238-om92cx5q 173 2 and and CC cord-000238-om92cx5q 173 3 brittle brittle JJ cord-000238-om92cx5q 173 4 clones clone NNS cord-000238-om92cx5q 173 5 of of IN cord-000238-om92cx5q 173 6 the the DT cord-000238-om92cx5q 173 7 virus virus NN cord-000238-om92cx5q 173 8 from from IN cord-000238-om92cx5q 173 9 the the DT cord-000238-om92cx5q 173 10 aforementioned aforementioned JJ cord-000238-om92cx5q 173 11 MOI MOI NNP cord-000238-om92cx5q 173 12 experiment experiment NN cord-000238-om92cx5q 173 13 14 14 CD cord-000238-om92cx5q 173 14 were be VBD cord-000238-om92cx5q 173 15 used use VBN cord-000238-om92cx5q 173 16 to to TO cord-000238-om92cx5q 173 17 found find VBN cord-000238-om92cx5q 173 18 lineages lineage NNS cord-000238-om92cx5q 173 19 passaged passage VBN cord-000238-om92cx5q 173 20 for for IN cord-000238-om92cx5q 173 21 50 50 CD cord-000238-om92cx5q 173 22 generations generation NNS cord-000238-om92cx5q 173 23 of of IN cord-000238-om92cx5q 173 24 experimental experimental JJ cord-000238-om92cx5q 173 25 evolution evolution NN cord-000238-om92cx5q 173 26 with with IN cord-000238-om92cx5q 173 27 periodic periodic JJ cord-000238-om92cx5q 173 28 ͑every ͑every JJS cord-000238-om92cx5q 173 29 fifth fifth JJ cord-000238-om92cx5q 173 30 generation͒ generation͒ HYPH cord-000238-om92cx5q 173 31 exposure exposure NN cord-000238-om92cx5q 173 32 to to IN cord-000238-om92cx5q 173 33 45 45 CD cord-000238-om92cx5q 173 34 ° ° NN cord-000238-om92cx5q 173 35 C c NN cord-000238-om92cx5q 173 36 heat heat NN cord-000238-om92cx5q 173 37 shock shock NN cord-000238-om92cx5q 173 38 . . . cord-000238-om92cx5q 174 1 At at IN cord-000238-om92cx5q 174 2 the the DT cord-000238-om92cx5q 174 3 end end NN cord-000238-om92cx5q 174 4 of of IN cord-000238-om92cx5q 174 5 the the DT cord-000238-om92cx5q 174 6 study study NN cord-000238-om92cx5q 174 7 , , , cord-000238-om92cx5q 174 8 we -PRON- PRP cord-000238-om92cx5q 174 9 measured measure VBD cord-000238-om92cx5q 174 10 mean mean JJ cord-000238-om92cx5q 174 11 % % NN cord-000238-om92cx5q 174 12 S s NN cord-000238-om92cx5q 174 13 at at IN cord-000238-om92cx5q 174 14 45 45 CD cord-000238-om92cx5q 174 15 ° ° NN cord-000238-om92cx5q 174 16 C c NN cord-000238-om92cx5q 174 17 measured measure VBN cord-000238-om92cx5q 174 18 for for IN cord-000238-om92cx5q 174 19 each each DT cord-000238-om92cx5q 174 20 founding found VBG cord-000238-om92cx5q 174 21 clone clone NN cord-000238-om92cx5q 174 22 and and CC cord-000238-om92cx5q 174 23 its -PRON- PRP$ cord-000238-om92cx5q 174 24 derived derive VBN cord-000238-om92cx5q 174 25 end end NN cord-000238-om92cx5q 174 26 point point NN cord-000238-om92cx5q 174 27 population population NN cord-000238-om92cx5q 174 28 to to TO cord-000238-om92cx5q 174 29 estimate estimate VB cord-000238-om92cx5q 174 30 ⌬ ⌬ NNP cord-000238-om92cx5q 174 31 % % NN cord-000238-om92cx5q 174 32 S S NNP cord-000238-om92cx5q 174 33 , , , cord-000238-om92cx5q 174 34 the the DT cord-000238-om92cx5q 174 35 change change NN cord-000238-om92cx5q 174 36 in in IN cord-000238-om92cx5q 174 37 percent percent NN cord-000238-om92cx5q 174 38 survival survival NN cord-000238-om92cx5q 174 39 after after IN cord-000238-om92cx5q 174 40 heat heat NN cord-000238-om92cx5q 174 41 - - HYPH cord-000238-om92cx5q 174 42 shock shock NN cord-000238-om92cx5q 174 43 selection selection NN cord-000238-om92cx5q 174 44 . . . cord-000238-om92cx5q 175 1 The the DT cord-000238-om92cx5q 175 2 results result NNS cord-000238-om92cx5q 175 3 showed show VBD cord-000238-om92cx5q 175 4 that that IN cord-000238-om92cx5q 175 5 the the DT cord-000238-om92cx5q 175 6 lineages lineage NNS cord-000238-om92cx5q 175 7 founded found VBN cord-000238-om92cx5q 175 8 by by IN cord-000238-om92cx5q 175 9 robust robust JJ cord-000238-om92cx5q 175 10 genotypes genotype NNS cord-000238-om92cx5q 175 11 were be VBD cord-000238-om92cx5q 175 12 more more RBR cord-000238-om92cx5q 175 13 evolvable evolvable JJ cord-000238-om92cx5q 175 14 ͑greater ͑greater . cord-000238-om92cx5q 175 15 ⌬ ⌬ NNPS cord-000238-om92cx5q 175 16 % % NN cord-000238-om92cx5q 175 17 S͒ s͒ NN cord-000238-om92cx5q 175 18 , , , cord-000238-om92cx5q 175 19 indicating indicate VBG cord-000238-om92cx5q 175 20 that that IN cord-000238-om92cx5q 175 21 robustness robustness NN cord-000238-om92cx5q 175 22 promoted promote VBD cord-000238-om92cx5q 175 23 evolvability evolvability NN cord-000238-om92cx5q 175 24 in in IN cord-000238-om92cx5q 175 25 phage phage NN cord-000238-om92cx5q 175 26 6 6 CD cord-000238-om92cx5q 175 27 , , , cord-000238-om92cx5q 175 28 under under IN cord-000238-om92cx5q 175 29 the the DT cord-000238-om92cx5q 175 30 test test NN cord-000238-om92cx5q 175 31 conditions condition NNS cord-000238-om92cx5q 175 32 . . . cord-000238-om92cx5q 176 1 The the DT cord-000238-om92cx5q 176 2 explanation explanation NN cord-000238-om92cx5q 176 3 was be VBD cord-000238-om92cx5q 176 4 that that IN cord-000238-om92cx5q 176 5 robust robust JJ cord-000238-om92cx5q 176 6 genotypes genotype NNS cord-000238-om92cx5q 176 7 of of IN cord-000238-om92cx5q 176 8 phage phage NN cord-000238-om92cx5q 176 9 6 6 CD cord-000238-om92cx5q 176 10 may may MD cord-000238-om92cx5q 176 11 have have VB cord-000238-om92cx5q 176 12 proteins protein NNS cord-000238-om92cx5q 176 13 that that WDT cord-000238-om92cx5q 176 14 better better RB cord-000238-om92cx5q 176 15 tolerate tolerate VBP cord-000238-om92cx5q 176 16 mutations mutation NNS cord-000238-om92cx5q 176 17 while while IN cord-000238-om92cx5q 176 18 maintaining maintain VBG cord-000238-om92cx5q 176 19 proper proper JJ cord-000238-om92cx5q 176 20 folding folding NN cord-000238-om92cx5q 176 21 especially especially RB cord-000238-om92cx5q 176 22 at at IN cord-000238-om92cx5q 176 23 moderate moderate JJ cord-000238-om92cx5q 176 24 temperatures temperature NNS cord-000238-om92cx5q 176 25 , , , cord-000238-om92cx5q 176 26 16 16 CD cord-000238-om92cx5q 176 27 similar similar JJ cord-000238-om92cx5q 176 28 to to IN cord-000238-om92cx5q 176 29 suggestions suggestion NNS cord-000238-om92cx5q 176 30 from from IN cord-000238-om92cx5q 176 31 in in IN cord-000238-om92cx5q 176 32 vitro vitro FW cord-000238-om92cx5q 176 33 studies study NNS cord-000238-om92cx5q 176 34 where where WRB cord-000238-om92cx5q 176 35 less less RBR cord-000238-om92cx5q 176 36 - - HYPH cord-000238-om92cx5q 176 37 sensitive sensitive JJ cord-000238-om92cx5q 176 38 ͑relatively ͑relatively , cord-000238-om92cx5q 176 39 robust͒ robust͒ JJ cord-000238-om92cx5q 176 40 proteins protein NNS cord-000238-om92cx5q 176 41 seem seem VBP cord-000238-om92cx5q 176 42 more more RBR cord-000238-om92cx5q 176 43 likely likely JJ cord-000238-om92cx5q 176 44 to to TO cord-000238-om92cx5q 176 45 maintain maintain VB cord-000238-om92cx5q 176 46 their -PRON- PRP$ cord-000238-om92cx5q 176 47 function function NN cord-000238-om92cx5q 176 48 in in IN cord-000238-om92cx5q 176 49 a a DT cord-000238-om92cx5q 176 50 new new JJ cord-000238-om92cx5q 176 51 environment environment NN cord-000238-om92cx5q 176 52 where where WRB cord-000238-om92cx5q 176 53 innovation innovation NN cord-000238-om92cx5q 176 54 is be VBZ cord-000238-om92cx5q 176 55 needed need VBN cord-000238-om92cx5q 176 56 . . . cord-000238-om92cx5q 177 1 11 11 CD cord-000238-om92cx5q 178 1 That that RB cord-000238-om92cx5q 178 2 is is RB cord-000238-om92cx5q 178 3 , , , cord-000238-om92cx5q 178 4 despite despite IN cord-000238-om92cx5q 178 5 equivalent equivalent JJ cord-000238-om92cx5q 178 6 sensitivity sensitivity NN cord-000238-om92cx5q 178 7 to to IN cord-000238-om92cx5q 178 8 45 45 CD cord-000238-om92cx5q 178 9 ° ° NN cord-000238-om92cx5q 178 10 C c NN cord-000238-om92cx5q 178 11 heat heat NN cord-000238-om92cx5q 178 12 shock shock NN cord-000238-om92cx5q 178 13 in in IN cord-000238-om92cx5q 178 14 the the DT cord-000238-om92cx5q 178 15 robust robust JJ cord-000238-om92cx5q 178 16 and and CC cord-000238-om92cx5q 178 17 brittle brittle JJ cord-000238-om92cx5q 178 18 founding founding NN cord-000238-om92cx5q 178 19 strains strain NNS cord-000238-om92cx5q 178 20 , , , cord-000238-om92cx5q 178 21 the the DT cord-000238-om92cx5q 178 22 robust robust JJ cord-000238-om92cx5q 178 23 viruses virus NNS cord-000238-om92cx5q 178 24 may may MD cord-000238-om92cx5q 178 25 have have VB cord-000238-om92cx5q 178 26 proteins protein NNS cord-000238-om92cx5q 178 27 that that WDT cord-000238-om92cx5q 178 28 tend tend VBP cord-000238-om92cx5q 178 29 to to TO cord-000238-om92cx5q 178 30 be be VB cord-000238-om92cx5q 178 31 capable capable JJ cord-000238-om92cx5q 178 32 of of IN cord-000238-om92cx5q 178 33 undergoing undergo VBG cord-000238-om92cx5q 178 34 mutations mutation NNS cord-000238-om92cx5q 178 35 while while IN cord-000238-om92cx5q 178 36 maintaining maintain VBG cord-000238-om92cx5q 178 37 their -PRON- PRP$ cord-000238-om92cx5q 178 38 proper proper JJ cord-000238-om92cx5q 178 39 folding folding NN cord-000238-om92cx5q 178 40 when when WRB cord-000238-om92cx5q 178 41 45 45 CD cord-000238-om92cx5q 178 42 ° ° NN cord-000238-om92cx5q 178 43 C c NN cord-000238-om92cx5q 178 44 constitutes constitute VBZ cord-000238-om92cx5q 178 45 a a DT cord-000238-om92cx5q 178 46 selective selective JJ cord-000238-om92cx5q 178 47 environment environment NN cord-000238-om92cx5q 178 48 . . . cord-000238-om92cx5q 179 1 15 15 CD cord-000238-om92cx5q 180 1 Whether whether IN cord-000238-om92cx5q 180 2 this this DT cord-000238-om92cx5q 180 3 exact exact JJ cord-000238-om92cx5q 180 4 relationship relationship NN cord-000238-om92cx5q 180 5 extends extend VBZ cord-000238-om92cx5q 180 6 to to IN cord-000238-om92cx5q 180 7 other other JJ cord-000238-om92cx5q 180 8 novel novel JJ cord-000238-om92cx5q 180 9 environments environment NNS cord-000238-om92cx5q 180 10 has have VBZ cord-000238-om92cx5q 180 11 yet yet RB cord-000238-om92cx5q 180 12 to to TO cord-000238-om92cx5q 180 13 be be VB cord-000238-om92cx5q 180 14 explored explore VBN cord-000238-om92cx5q 180 15 . . . cord-000238-om92cx5q 181 1 But but CC cord-000238-om92cx5q 181 2 the the DT cord-000238-om92cx5q 181 3 fact fact NN cord-000238-om92cx5q 181 4 that that IN cord-000238-om92cx5q 181 5 a a DT cord-000238-om92cx5q 181 6 positive positive JJ cord-000238-om92cx5q 181 7 relationship relationship NN cord-000238-om92cx5q 181 8 exists exist VBZ cord-000238-om92cx5q 181 9 at at RB cord-000238-om92cx5q 181 10 all all RB cord-000238-om92cx5q 181 11 is be VBZ cord-000238-om92cx5q 181 12 essential essential JJ cord-000238-om92cx5q 181 13 for for IN cord-000238-om92cx5q 181 14 tests test NNS cord-000238-om92cx5q 181 15 of of IN cord-000238-om92cx5q 181 16 existing exist VBG cord-000238-om92cx5q 181 17 theory theory NN cord-000238-om92cx5q 181 18 , , , cord-000238-om92cx5q 181 19 8 8 CD cord-000238-om92cx5q 181 20 and and CC cord-000238-om92cx5q 181 21 begs beg VBZ cord-000238-om92cx5q 181 22 the the DT cord-000238-om92cx5q 181 23 question question NN cord-000238-om92cx5q 181 24 of of IN cord-000238-om92cx5q 181 25 whether whether IN cord-000238-om92cx5q 181 26 the the DT cord-000238-om92cx5q 181 27 observed observed JJ cord-000238-om92cx5q 181 28 relationship relationship NN cord-000238-om92cx5q 181 29 between between IN cord-000238-om92cx5q 181 30 genetic genetic JJ cord-000238-om92cx5q 181 31 robustness robustness NN cord-000238-om92cx5q 181 32 and and CC cord-000238-om92cx5q 181 33 evolvability evolvability NN cord-000238-om92cx5q 181 34 extends extend VBZ cord-000238-om92cx5q 181 35 to to IN cord-000238-om92cx5q 181 36 evolution evolution NN cord-000238-om92cx5q 181 37 of of IN cord-000238-om92cx5q 181 38 human human JJ cord-000238-om92cx5q 181 39 pathogens pathogen NNS cord-000238-om92cx5q 181 40 , , , cord-000238-om92cx5q 181 41 as as IN cord-000238-om92cx5q 181 42 implicated implicate VBN cord-000238-om92cx5q 181 43 in in IN cord-000238-om92cx5q 181 44 recent recent JJ cord-000238-om92cx5q 181 45 claims claim NNS cord-000238-om92cx5q 181 46 of of IN cord-000238-om92cx5q 181 47 evolved evolve VBN cord-000238-om92cx5q 181 48 increases increase NNS cord-000238-om92cx5q 181 49 in in IN cord-000238-om92cx5q 181 50 genetic genetic JJ cord-000238-om92cx5q 181 51 robustness robustness NN cord-000238-om92cx5q 181 52 in in IN cord-000238-om92cx5q 181 53 HIV HIV NNP cord-000238-om92cx5q 181 54 . . . cord-000238-om92cx5q 182 1 38 38 CD cord-000238-om92cx5q 182 2 Antiviral antiviral JJ cord-000238-om92cx5q 182 3 therapy therapy NN cord-000238-om92cx5q 182 4 consisting consist VBG cord-000238-om92cx5q 182 5 of of IN cord-000238-om92cx5q 182 6 chemical chemical NN cord-000238-om92cx5q 182 7 mutagenesis mutagenesis NN cord-000238-om92cx5q 182 8 that that WDT cord-000238-om92cx5q 182 9 induces induce VBZ cord-000238-om92cx5q 182 10 an an DT cord-000238-om92cx5q 182 11 insurmountable insurmountable JJ cord-000238-om92cx5q 182 12 mutational mutational JJ cord-000238-om92cx5q 182 13 load load NN cord-000238-om92cx5q 182 14 seems seem VBZ cord-000238-om92cx5q 182 15 promising promising JJ cord-000238-om92cx5q 182 16 for for IN cord-000238-om92cx5q 182 17 treatment treatment NN cord-000238-om92cx5q 182 18 of of IN cord-000238-om92cx5q 182 19 RNA RNA NNP cord-000238-om92cx5q 182 20 virus virus NN cord-000238-om92cx5q 182 21 infections infection NNS cord-000238-om92cx5q 182 22 . . . cord-000238-om92cx5q 183 1 [ [ -LRB- cord-000238-om92cx5q 183 2 39 39 CD cord-000238-om92cx5q 183 3 ] ] -RRB- cord-000238-om92cx5q 183 4 [ [ -LRB- cord-000238-om92cx5q 183 5 40 40 CD cord-000238-om92cx5q 183 6 ] ] -RRB- cord-000238-om92cx5q 183 7 [ [ -LRB- cord-000238-om92cx5q 183 8 41 41 CD cord-000238-om92cx5q 183 9 ] ] -RRB- cord-000238-om92cx5q 184 1 But but CC cord-000238-om92cx5q 184 2 such such JJ cord-000238-om92cx5q 184 3 measures measure NNS cord-000238-om92cx5q 184 4 may may MD cord-000238-om92cx5q 184 5 select select VB cord-000238-om92cx5q 184 6 for for IN cord-000238-om92cx5q 184 7 RNA RNA NNP cord-000238-om92cx5q 184 8 viruses virus NNS cord-000238-om92cx5q 184 9 to to TO cord-000238-om92cx5q 184 10 evolve evolve VB cord-000238-om92cx5q 184 11 altered alter VBN cord-000238-om92cx5q 184 12 polymerases polymerase NNS cord-000238-om92cx5q 184 13 with with IN cord-000238-om92cx5q 184 14 improved improve VBN cord-000238-om92cx5q 184 15 replication replication NN cord-000238-om92cx5q 184 16 fidelity fidelity NN cord-000238-om92cx5q 184 17 that that WDT cord-000238-om92cx5q 184 18 reduces reduce VBZ cord-000238-om92cx5q 184 19 genomic genomic JJ cord-000238-om92cx5q 184 20 mutation mutation NN cord-000238-om92cx5q 184 21 rates rate NNS cord-000238-om92cx5q 184 22 . . . cord-000238-om92cx5q 185 1 42 42 CD cord-000238-om92cx5q 186 1 Alternatively alternatively RB cord-000238-om92cx5q 186 2 , , , cord-000238-om92cx5q 186 3 viruses virus NNS cord-000238-om92cx5q 186 4 may may MD cord-000238-om92cx5q 186 5 be be VB cord-000238-om92cx5q 186 6 selected select VBN cord-000238-om92cx5q 186 7 to to TO cord-000238-om92cx5q 186 8 evolve evolve VB cord-000238-om92cx5q 186 9 mechanisms mechanism NNS cord-000238-om92cx5q 186 10 of of IN cord-000238-om92cx5q 186 11 genetic genetic JJ cord-000238-om92cx5q 186 12 robustness robustness NN cord-000238-om92cx5q 186 13 where where WRB cord-000238-om92cx5q 186 14 high high JJ cord-000238-om92cx5q 186 15 mutation mutation NN cord-000238-om92cx5q 186 16 rates rate NNS cord-000238-om92cx5q 186 17 are be VBP cord-000238-om92cx5q 186 18 preserved preserve VBN cord-000238-om92cx5q 186 19 but but CC cord-000238-om92cx5q 186 20 phenotypic phenotypic JJ cord-000238-om92cx5q 186 21 effects effect NNS cord-000238-om92cx5q 186 22 of of IN cord-000238-om92cx5q 186 23 the the DT cord-000238-om92cx5q 186 24 mutagen mutagen NN cord-000238-om92cx5q 186 25 are be VBP cord-000238-om92cx5q 186 26 buffered buffer VBN cord-000238-om92cx5q 186 27 . . . cord-000238-om92cx5q 187 1 This this DT cord-000238-om92cx5q 187 2 outcome outcome NN cord-000238-om92cx5q 187 3 is be VBZ cord-000238-om92cx5q 187 4 perhaps perhaps RB cord-000238-om92cx5q 187 5 unlikely unlikely JJ cord-000238-om92cx5q 187 6 given give VBN cord-000238-om92cx5q 187 7 the the DT cord-000238-om92cx5q 187 8 empirical empirical JJ cord-000238-om92cx5q 187 9 data datum NNS cord-000238-om92cx5q 187 10 thus thus RB cord-000238-om92cx5q 187 11 far far RB cord-000238-om92cx5q 187 12 . . . cord-000238-om92cx5q 188 1 43 43 CD cord-000238-om92cx5q 189 1 However however RB cord-000238-om92cx5q 189 2 , , , cord-000238-om92cx5q 189 3 further further JJ cord-000238-om92cx5q 189 4 data datum NNS cord-000238-om92cx5q 189 5 involving involve VBG cord-000238-om92cx5q 189 6 a a DT cord-000238-om92cx5q 189 7 variety variety NN cord-000238-om92cx5q 189 8 of of IN cord-000238-om92cx5q 189 9 different different JJ cord-000238-om92cx5q 189 10 viruses virus NNS cord-000238-om92cx5q 189 11 are be VBP cord-000238-om92cx5q 189 12 warranted warrant VBN cord-000238-om92cx5q 189 13 , , , cord-000238-om92cx5q 189 14 and and CC cord-000238-om92cx5q 189 15 the the DT cord-000238-om92cx5q 189 16 results result NNS cord-000238-om92cx5q 189 17 from from IN cord-000238-om92cx5q 189 18 experimental experimental JJ cord-000238-om92cx5q 189 19 evolution evolution NN cord-000238-om92cx5q 189 20 studies study NNS cord-000238-om92cx5q 189 21 caution caution VBP cord-000238-om92cx5q 189 22 that that IN cord-000238-om92cx5q 189 23 robustness robustness NN cord-000238-om92cx5q 189 24 may may MD cord-000238-om92cx5q 189 25 be be VB cord-000238-om92cx5q 189 26 positively positively RB cord-000238-om92cx5q 189 27 related relate VBN cord-000238-om92cx5q 189 28 to to IN cord-000238-om92cx5q 189 29 evolvability evolvability NN cord-000238-om92cx5q 189 30 and and CC cord-000238-om92cx5q 189 31 to to IN cord-000238-om92cx5q 189 32 competitive competitive JJ cord-000238-om92cx5q 189 33 superiority superiority NN cord-000238-om92cx5q 189 34 in in IN cord-000238-om92cx5q 189 35 RNA RNA NNP cord-000238-om92cx5q 189 36 viruses virus NNS cord-000238-om92cx5q 189 37 . . . cord-000238-om92cx5q 190 1 15 15 CD cord-000238-om92cx5q 191 1 A a DT cord-000238-om92cx5q 191 2 second second JJ cord-000238-om92cx5q 191 3 experiment experiment NN cord-000238-om92cx5q 191 4 centered center VBN cord-000238-om92cx5q 191 5 closely closely RB cord-000238-om92cx5q 191 6 on on IN cord-000238-om92cx5q 191 7 the the DT cord-000238-om92cx5q 191 8 potential potential JJ cord-000238-om92cx5q 191 9 link link NN cord-000238-om92cx5q 191 10 between between IN cord-000238-om92cx5q 191 11 robustness robustness NN cord-000238-om92cx5q 191 12 and and CC cord-000238-om92cx5q 191 13 pathogen pathogen NN cord-000238-om92cx5q 191 14 evolvability evolvability NN cord-000238-om92cx5q 191 15 on on IN cord-000238-om92cx5q 191 16 novel novel JJ cord-000238-om92cx5q 191 17 hosts host NNS cord-000238-om92cx5q 191 18 . . . cord-000238-om92cx5q 192 1 Environmental environmental JJ cord-000238-om92cx5q 192 2 robustness robustness NN cord-000238-om92cx5q 192 3 of of IN cord-000238-om92cx5q 192 4 a a DT cord-000238-om92cx5q 192 5 virus virus NN cord-000238-om92cx5q 192 6 may may MD cord-000238-om92cx5q 192 7 be be VB cord-000238-om92cx5q 192 8 defined define VBN cord-000238-om92cx5q 192 9 in in IN cord-000238-om92cx5q 192 10 terms term NNS cord-000238-om92cx5q 192 11 of of IN cord-000238-om92cx5q 192 12 its -PRON- PRP$ cord-000238-om92cx5q 192 13 host host NN cord-000238-om92cx5q 192 14 generalization generalization NN cord-000238-om92cx5q 192 15 ͑host ͑host NN cord-000238-om92cx5q 192 16 range range NN cord-000238-om92cx5q 192 17 , , , cord-000238-om92cx5q 192 18 the the DT cord-000238-om92cx5q 192 19 number number NN cord-000238-om92cx5q 192 20 of of IN cord-000238-om92cx5q 192 21 host host NN cord-000238-om92cx5q 192 22 types type NNS cord-000238-om92cx5q 192 23 it -PRON- PRP cord-000238-om92cx5q 192 24 can can MD cord-000238-om92cx5q 192 25 productively productively RB cord-000238-om92cx5q 192 26 infect͒. infect͒. NNP cord-000238-om92cx5q 192 27 44 44 CD cord-000238-om92cx5q 192 28 Theory theory NN cord-000238-om92cx5q 192 29 predicts predict VBZ cord-000238-om92cx5q 192 30 that that IN cord-000238-om92cx5q 192 31 evolved evolve VBD cord-000238-om92cx5q 192 32 generalization generalization NN cord-000238-om92cx5q 192 33 may may MD cord-000238-om92cx5q 192 34 be be VB cord-000238-om92cx5q 192 35 particularly particularly RB cord-000238-om92cx5q 192 36 useful useful JJ cord-000238-om92cx5q 192 37 if if IN cord-000238-om92cx5q 192 38 organ organ NN cord-000238-om92cx5q 192 39 - - HYPH cord-000238-om92cx5q 192 40 isms ism NNS cord-000238-om92cx5q 192 41 tend tend VBP cord-000238-om92cx5q 192 42 to to TO cord-000238-om92cx5q 192 43 encounter encounter VB cord-000238-om92cx5q 192 44 environments environment NNS cord-000238-om92cx5q 192 45 that that WDT cord-000238-om92cx5q 192 46 change change VBP cord-000238-om92cx5q 192 47 unexpectedly unexpectedly RB cord-000238-om92cx5q 192 48 . . . cord-000238-om92cx5q 193 1 45 45 CD cord-000238-om92cx5q 194 1 That that RB cord-000238-om92cx5q 194 2 is is RB cord-000238-om92cx5q 194 3 , , , cord-000238-om92cx5q 194 4 generalists generalist NNS cord-000238-om92cx5q 194 5 may may MD cord-000238-om92cx5q 194 6 be be VB cord-000238-om92cx5q 194 7 favored favor VBN cord-000238-om92cx5q 194 8 by by IN cord-000238-om92cx5q 194 9 selection selection NN cord-000238-om92cx5q 194 10 because because IN cord-000238-om92cx5q 194 11 they -PRON- PRP cord-000238-om92cx5q 194 12 are be VBP cord-000238-om92cx5q 194 13 better well RBR cord-000238-om92cx5q 194 14 predisposed predisposed JJ cord-000238-om92cx5q 194 15 to to TO cord-000238-om92cx5q 194 16 survive survive VB cord-000238-om92cx5q 194 17 and and CC cord-000238-om92cx5q 194 18 give give VB cord-000238-om92cx5q 194 19 rise rise NN cord-000238-om92cx5q 194 20 to to IN cord-000238-om92cx5q 194 21 successful successful JJ cord-000238-om92cx5q 194 22 progeny progeny NN cord-000238-om92cx5q 194 23 in in IN cord-000238-om92cx5q 194 24 the the DT cord-000238-om92cx5q 194 25 face face NN cord-000238-om92cx5q 194 26 of of IN cord-000238-om92cx5q 194 27 variable variable JJ cord-000238-om92cx5q 194 28 environments environment NNS cord-000238-om92cx5q 194 29 , , , cord-000238-om92cx5q 194 30 relative relative JJ cord-000238-om92cx5q 194 31 to to IN cord-000238-om92cx5q 194 32 specialists specialist NNS cord-000238-om92cx5q 194 33 that that WDT cord-000238-om92cx5q 194 34 possess possess VBP cord-000238-om92cx5q 194 35 a a DT cord-000238-om92cx5q 194 36 narrow narrow JJ cord-000238-om92cx5q 194 37 niche niche NN cord-000238-om92cx5q 194 38 . . . cord-000238-om92cx5q 195 1 This this DT cord-000238-om92cx5q 195 2 idea idea NN cord-000238-om92cx5q 195 3 may may MD cord-000238-om92cx5q 195 4 explain explain VB cord-000238-om92cx5q 195 5 why why WRB cord-000238-om92cx5q 195 6 pathogens pathogen NNS cord-000238-om92cx5q 195 7 with with IN cord-000238-om92cx5q 195 8 a a DT cord-000238-om92cx5q 195 9 pre pre JJ cord-000238-om92cx5q 195 10 - - JJ cord-000238-om92cx5q 195 11 existing exist VBG cord-000238-om92cx5q 195 12 broad broad JJ cord-000238-om92cx5q 195 13 host host NN cord-000238-om92cx5q 195 14 range range NN cord-000238-om92cx5q 195 15 seem seem VBP cord-000238-om92cx5q 195 16 better well RBR cord-000238-om92cx5q 195 17 able able JJ cord-000238-om92cx5q 195 18 to to TO cord-000238-om92cx5q 195 19 emerge emerge VB cord-000238-om92cx5q 195 20 on on IN cord-000238-om92cx5q 195 21 novel novel JJ cord-000238-om92cx5q 195 22 hosts host NNS cord-000238-om92cx5q 195 23 , , , cord-000238-om92cx5q 195 24 relative relative JJ cord-000238-om92cx5q 195 25 to to IN cord-000238-om92cx5q 195 26 specialized specialized JJ cord-000238-om92cx5q 195 27 pathogens pathogen NNS cord-000238-om92cx5q 195 28 . . . cord-000238-om92cx5q 196 1 [ [ -LRB- cord-000238-om92cx5q 196 2 46 46 CD cord-000238-om92cx5q 196 3 ] ] -RRB- cord-000238-om92cx5q 196 4 [ [ -LRB- cord-000238-om92cx5q 196 5 47 47 CD cord-000238-om92cx5q 196 6 ] ] -RRB- cord-000238-om92cx5q 196 7 [ [ -LRB- cord-000238-om92cx5q 196 8 48 48 CD cord-000238-om92cx5q 196 9 ] ] -RRB- cord-000238-om92cx5q 197 1 To to TO cord-000238-om92cx5q 197 2 test test VB cord-000238-om92cx5q 197 3 this this DT cord-000238-om92cx5q 197 4 idea idea NN cord-000238-om92cx5q 197 5 directly directly RB cord-000238-om92cx5q 197 6 , , , cord-000238-om92cx5q 197 7 we -PRON- PRP cord-000238-om92cx5q 197 8 used use VBD cord-000238-om92cx5q 197 9 populations population NNS cord-000238-om92cx5q 197 10 of of IN cord-000238-om92cx5q 197 11 VSV VSV NNP cord-000238-om92cx5q 197 12 that that WDT cord-000238-om92cx5q 197 13 evolved evolve VBD cord-000238-om92cx5q 197 14 differences difference NNS cord-000238-om92cx5q 197 15 in in IN cord-000238-om92cx5q 197 16 host host NN cord-000238-om92cx5q 197 17 use use NN cord-000238-om92cx5q 197 18 because because IN cord-000238-om92cx5q 197 19 of of IN cord-000238-om92cx5q 197 20 prior prior JJ cord-000238-om92cx5q 197 21 selection selection NN cord-000238-om92cx5q 197 22 in in IN cord-000238-om92cx5q 197 23 constant constant JJ cord-000238-om92cx5q 197 24 versus versus IN cord-000238-om92cx5q 197 25 variable variable JJ cord-000238-om92cx5q 197 26 host host NN cord-000238-om92cx5q 197 27 environments environment NNS cord-000238-om92cx5q 197 28 . . . cord-000238-om92cx5q 198 1 49 49 CD cord-000238-om92cx5q 198 2 , , , cord-000238-om92cx5q 198 3 50 50 CD cord-000238-om92cx5q 198 4 The the DT cord-000238-om92cx5q 198 5 formal formal JJ cord-000238-om92cx5q 198 6 prediction prediction NN cord-000238-om92cx5q 198 7 was be VBD cord-000238-om92cx5q 198 8 that that IN cord-000238-om92cx5q 198 9 VSV VSV NNP cord-000238-om92cx5q 198 10 populations population NNS cord-000238-om92cx5q 198 11 experiencing experience VBG cord-000238-om92cx5q 198 12 direct direct JJ cord-000238-om92cx5q 198 13 selection selection NN cord-000238-om92cx5q 198 14 for for IN cord-000238-om92cx5q 198 15 host host NN cord-000238-om92cx5q 198 16 range range NN cord-000238-om92cx5q 198 17 would would MD cord-000238-om92cx5q 198 18 have have VB cord-000238-om92cx5q 198 19 higher high JJR cord-000238-om92cx5q 198 20 mean mean JJ cord-000238-om92cx5q 198 21 growth growth NN cord-000238-om92cx5q 198 22 and and CC cord-000238-om92cx5q 198 23 less less JJR cord-000238-om92cx5q 198 24 variance variance NN cord-000238-om92cx5q 198 25 in in IN cord-000238-om92cx5q 198 26 mean mean JJ cord-000238-om92cx5q 198 27 growth growth NN cord-000238-om92cx5q 198 28 on on IN cord-000238-om92cx5q 198 29 a a DT cord-000238-om92cx5q 198 30 collection collection NN cord-000238-om92cx5q 198 31 of of IN cord-000238-om92cx5q 198 32 challenge challenge NN cord-000238-om92cx5q 198 33 hosts host NNS cord-000238-om92cx5q 198 34 , , , cord-000238-om92cx5q 198 35 compared compare VBN cord-000238-om92cx5q 198 36 to to IN cord-000238-om92cx5q 198 37 VSV VSV NNP cord-000238-om92cx5q 198 38 populations population NNS cord-000238-om92cx5q 198 39 that that WDT cord-000238-om92cx5q 198 40 were be VBD cord-000238-om92cx5q 198 41 either either CC cord-000238-om92cx5q 198 42 relatively relatively RB cord-000238-om92cx5q 198 43 specialized specialized JJ cord-000238-om92cx5q 198 44 or or CC cord-000238-om92cx5q 198 45 indirectly indirectly RB cord-000238-om92cx5q 198 46 selected select VBN cord-000238-om92cx5q 198 47 for for IN cord-000238-om92cx5q 198 48 host host NN cord-000238-om92cx5q 198 49 range range NN cord-000238-om92cx5q 198 50 . . . cord-000238-om92cx5q 199 1 51 51 CD cord-000238-om92cx5q 200 1 When when WRB cord-000238-om92cx5q 200 2 challenged challenge VBN cord-000238-om92cx5q 200 3 to to TO cord-000238-om92cx5q 200 4 grow grow VB cord-000238-om92cx5q 200 5 on on IN cord-000238-om92cx5q 200 6 four four CD cord-000238-om92cx5q 200 7 novel novel JJ cord-000238-om92cx5q 200 8 hosts host NNS cord-000238-om92cx5q 200 9 in in IN cord-000238-om92cx5q 200 10 vitro vitro FW cord-000238-om92cx5q 200 11 , , , cord-000238-om92cx5q 200 12 the the DT cord-000238-om92cx5q 200 13 viruses virus NNS cord-000238-om92cx5q 200 14 that that WDT cord-000238-om92cx5q 200 15 had have VBD cord-000238-om92cx5q 200 16 been be VBN cord-000238-om92cx5q 200 17 selected select VBN cord-000238-om92cx5q 200 18 for for IN cord-000238-om92cx5q 200 19 generalism generalism NN cord-000238-om92cx5q 200 20 exhibited exhibit VBD cord-000238-om92cx5q 200 21 higher high JJR cord-000238-om92cx5q 200 22 or or CC cord-000238-om92cx5q 200 23 equivalent equivalent JJ cord-000238-om92cx5q 200 24 host host NN cord-000238-om92cx5q 200 25 growth growth NN cord-000238-om92cx5q 200 26 , , , cord-000238-om92cx5q 200 27 lower low JJR cord-000238-om92cx5q 200 28 among among IN cord-000238-om92cx5q 200 29 - - HYPH cord-000238-om92cx5q 200 30 population population NN cord-000238-om92cx5q 200 31 variance variance NN cord-000238-om92cx5q 200 32 in in IN cord-000238-om92cx5q 200 33 host host NN cord-000238-om92cx5q 200 34 growth growth NN cord-000238-om92cx5q 200 35 , , , cord-000238-om92cx5q 200 36 and and CC cord-000238-om92cx5q 200 37 lower low JJR cord-000238-om92cx5q 200 38 variance variance NN cord-000238-om92cx5q 200 39 in in IN cord-000238-om92cx5q 200 40 population population NN cord-000238-om92cx5q 200 41 growth growth NN cord-000238-om92cx5q 200 42 across across IN cord-000238-om92cx5q 200 43 hosts host NNS cord-000238-om92cx5q 200 44 . . . cord-000238-om92cx5q 201 1 Thus thus RB cord-000238-om92cx5q 201 2 , , , cord-000238-om92cx5q 201 3 these these DT cord-000238-om92cx5q 201 4 three three CD cord-000238-om92cx5q 201 5 predictions prediction NNS cord-000238-om92cx5q 201 6 relating relate VBG cord-000238-om92cx5q 201 7 to to IN cord-000238-om92cx5q 201 8 the the DT cord-000238-om92cx5q 201 9 hypothesis hypothesis NN cord-000238-om92cx5q 201 10 were be VBD cord-000238-om92cx5q 201 11 generally generally RB cord-000238-om92cx5q 201 12 supported support VBN cord-000238-om92cx5q 201 13 because because IN cord-000238-om92cx5q 201 14 direct direct JJ cord-000238-om92cx5q 201 15 selection selection NN cord-000238-om92cx5q 201 16 for for IN cord-000238-om92cx5q 201 17 host host NN cord-000238-om92cx5q 201 18 breadth breadth NN cord-000238-om92cx5q 201 19 more more RBR cord-000238-om92cx5q 201 20 often often RB cord-000238-om92cx5q 201 21 allowed allow VBN cord-000238-om92cx5q 201 22 successful successful JJ cord-000238-om92cx5q 201 23 emergence emergence NN cord-000238-om92cx5q 201 24 . . . cord-000238-om92cx5q 202 1 The the DT cord-000238-om92cx5q 202 2 results result NNS cord-000238-om92cx5q 202 3 suggested suggest VBD cord-000238-om92cx5q 202 4 that that IN cord-000238-om92cx5q 202 5 determination determination NN cord-000238-om92cx5q 202 6 of of IN cord-000238-om92cx5q 202 7 current current JJ cord-000238-om92cx5q 202 8 niche niche NN cord-000238-om92cx5q 202 9 breadth breadth NN cord-000238-om92cx5q 202 10 should should MD cord-000238-om92cx5q 202 11 be be VB cord-000238-om92cx5q 202 12 further further RB cord-000238-om92cx5q 202 13 investigated investigate VBN cord-000238-om92cx5q 202 14 as as IN cord-000238-om92cx5q 202 15 a a DT cord-000238-om92cx5q 202 16 potentially potentially RB cord-000238-om92cx5q 202 17 useful useful JJ cord-000238-om92cx5q 202 18 indicator indicator NN cord-000238-om92cx5q 202 19 in in IN cord-000238-om92cx5q 202 20 predicting predict VBG cord-000238-om92cx5q 202 21 pathogen pathogen NN cord-000238-om92cx5q 202 22 emergence emergence NN cord-000238-om92cx5q 202 23 . . . cord-000238-om92cx5q 203 1 51 51 CD cord-000238-om92cx5q 203 2 , , , cord-000238-om92cx5q 203 3 52 52 CD cord-000238-om92cx5q 203 4 Because because IN cord-000238-om92cx5q 203 5 these these DT cord-000238-om92cx5q 203 6 many many JJ cord-000238-om92cx5q 203 7 recent recent JJ cord-000238-om92cx5q 203 8 empirical empirical JJ cord-000238-om92cx5q 203 9 breakthroughs breakthrough NNS cord-000238-om92cx5q 203 10 in in IN cord-000238-om92cx5q 203 11 the the DT cord-000238-om92cx5q 203 12 study study NN cord-000238-om92cx5q 203 13 of of IN cord-000238-om92cx5q 203 14 robustness robustness NN cord-000238-om92cx5q 203 15 have have VBP cord-000238-om92cx5q 203 16 involved involve VBN cord-000238-om92cx5q 203 17 microbes microbe NNS cord-000238-om92cx5q 203 18 , , , cord-000238-om92cx5q 203 19 one one PRP cord-000238-om92cx5q 203 20 might may MD cord-000238-om92cx5q 203 21 predict predict VB cord-000238-om92cx5q 203 22 that that IN cord-000238-om92cx5q 203 23 infectious infectious JJ cord-000238-om92cx5q 203 24 disease disease NN cord-000238-om92cx5q 203 25 is be VBZ cord-000238-om92cx5q 203 26 the the DT cord-000238-om92cx5q 203 27 primary primary JJ cord-000238-om92cx5q 203 28 biomedical biomedical JJ cord-000238-om92cx5q 203 29 realm realm NN cord-000238-om92cx5q 203 30 where where WRB cord-000238-om92cx5q 203 31 these these DT cord-000238-om92cx5q 203 32 robustness robustness NN cord-000238-om92cx5q 203 33 results result NNS cord-000238-om92cx5q 203 34 might may MD cord-000238-om92cx5q 203 35 have have VB cord-000238-om92cx5q 203 36 an an DT cord-000238-om92cx5q 203 37 immediate immediate JJ cord-000238-om92cx5q 203 38 , , , cord-000238-om92cx5q 203 39 practical practical JJ cord-000238-om92cx5q 203 40 impact impact NN cord-000238-om92cx5q 203 41 . . . cord-000238-om92cx5q 204 1 Below below IN cord-000238-om92cx5q 204 2 we -PRON- PRP cord-000238-om92cx5q 204 3 describe describe VBP cord-000238-om92cx5q 204 4 three three CD cord-000238-om92cx5q 204 5 examples example NNS cord-000238-om92cx5q 204 6 of of IN cord-000238-om92cx5q 204 7 biomedically biomedically RB cord-000238-om92cx5q 204 8 important important JJ cord-000238-om92cx5q 204 9 human human JJ cord-000238-om92cx5q 204 10 disease disease NN cord-000238-om92cx5q 204 11 systems system NNS cord-000238-om92cx5q 204 12 where where WRB cord-000238-om92cx5q 204 13 robustness robustness NN cord-000238-om92cx5q 204 14 theory theory NN cord-000238-om92cx5q 204 15 appears appear VBZ cord-000238-om92cx5q 204 16 highly highly RB cord-000238-om92cx5q 204 17 relevant relevant JJ cord-000238-om92cx5q 204 18 . . . cord-000238-om92cx5q 205 1 The the DT cord-000238-om92cx5q 205 2 effects effect NNS cord-000238-om92cx5q 205 3 of of IN cord-000238-om92cx5q 205 4 evolution evolution NN cord-000238-om92cx5q 205 5 are be VBP cord-000238-om92cx5q 205 6 sometimes sometimes RB cord-000238-om92cx5q 205 7 difficult difficult JJ cord-000238-om92cx5q 205 8 to to TO cord-000238-om92cx5q 205 9 perceive perceive VB cord-000238-om92cx5q 205 10 in in IN cord-000238-om92cx5q 205 11 daily daily JJ cord-000238-om92cx5q 205 12 life life NN cord-000238-om92cx5q 205 13 , , , cord-000238-om92cx5q 205 14 making make VBG cord-000238-om92cx5q 205 15 public public JJ cord-000238-om92cx5q 205 16 skepticism skepticism NN cord-000238-om92cx5q 205 17 of of IN cord-000238-om92cx5q 205 18 the the DT cord-000238-om92cx5q 205 19 existence existence NN cord-000238-om92cx5q 205 20 of of IN cord-000238-om92cx5q 205 21 evolution evolution NN cord-000238-om92cx5q 205 22 all all PDT cord-000238-om92cx5q 205 23 the the DT cord-000238-om92cx5q 205 24 more more RBR cord-000238-om92cx5q 205 25 challenging challenging JJ cord-000238-om92cx5q 205 26 to to TO cord-000238-om92cx5q 205 27 address address VB cord-000238-om92cx5q 205 28 . . . cord-000238-om92cx5q 206 1 Perhaps perhaps RB cord-000238-om92cx5q 206 2 the the DT cord-000238-om92cx5q 206 3 foremost foremost JJ cord-000238-om92cx5q 206 4 example example NN cord-000238-om92cx5q 206 5 used use VBN cord-000238-om92cx5q 206 6 to to TO cord-000238-om92cx5q 206 7 counter counter VB cord-000238-om92cx5q 206 8 these these DT cord-000238-om92cx5q 206 9 notions notion NNS cord-000238-om92cx5q 206 10 is be VBZ cord-000238-om92cx5q 206 11 the the DT cord-000238-om92cx5q 206 12 widespread widespread JJ cord-000238-om92cx5q 206 13 problem problem NN cord-000238-om92cx5q 206 14 of of IN cord-000238-om92cx5q 206 15 resurgent resurgent JJ cord-000238-om92cx5q 206 16 diseases disease NNS cord-000238-om92cx5q 206 17 that that WDT cord-000238-om92cx5q 206 18 had have VBD cord-000238-om92cx5q 206 19 been be VBN cord-000238-om92cx5q 206 20 previously previously RB cord-000238-om92cx5q 206 21 treated treat VBN cord-000238-om92cx5q 206 22 through through IN cord-000238-om92cx5q 206 23 antibiotics antibiotic NNS cord-000238-om92cx5q 206 24 , , , cord-000238-om92cx5q 206 25 especially especially RB cord-000238-om92cx5q 206 26 evolved evolve VBN cord-000238-om92cx5q 206 27 resistance resistance NN cord-000238-om92cx5q 206 28 in in IN cord-000238-om92cx5q 206 29 bacterial bacterial JJ cord-000238-om92cx5q 206 30 pathogens pathogen NNS cord-000238-om92cx5q 206 31 . . . cord-000238-om92cx5q 207 1 Although although IN cord-000238-om92cx5q 207 2 naturally naturally RB cord-000238-om92cx5q 207 3 produced produce VBN cord-000238-om92cx5q 207 4 antibiotics antibiotic NNS cord-000238-om92cx5q 207 5 evolved evolve VBN cord-000238-om92cx5q 207 6 in in IN cord-000238-om92cx5q 207 7 microbial microbial JJ cord-000238-om92cx5q 207 8 communities community NNS cord-000238-om92cx5q 207 9 long long RB cord-000238-om92cx5q 207 10 before before IN cord-000238-om92cx5q 207 11 humans human NNS cord-000238-om92cx5q 207 12 appeared appear VBD cord-000238-om92cx5q 207 13 as as IN cord-000238-om92cx5q 207 14 a a DT cord-000238-om92cx5q 207 15 species species NN cord-000238-om92cx5q 207 16 , , , cord-000238-om92cx5q 207 17 the the DT cord-000238-om92cx5q 207 18 medical medical JJ cord-000238-om92cx5q 207 19 realm realm NN cord-000238-om92cx5q 207 20 began begin VBD cord-000238-om92cx5q 207 21 earnestly earnestly RB cord-000238-om92cx5q 207 22 administering administer VBG cord-000238-om92cx5q 207 23 antibiotic antibiotic JJ cord-000238-om92cx5q 207 24 drugs drug NNS cord-000238-om92cx5q 207 25 only only RB cord-000238-om92cx5q 207 26 since since IN cord-000238-om92cx5q 207 27 their -PRON- PRP$ cord-000238-om92cx5q 207 28 discovery discovery NN cord-000238-om92cx5q 207 29 in in IN cord-000238-om92cx5q 207 30 the the DT cord-000238-om92cx5q 207 31 1950s 1950s CD cord-000238-om92cx5q 207 32 . . . cord-000238-om92cx5q 208 1 Widespread widespread JJ cord-000238-om92cx5q 208 2 production production NN cord-000238-om92cx5q 208 3 and and CC cord-000238-om92cx5q 208 4 utilization utilization NN cord-000238-om92cx5q 208 5 of of IN cord-000238-om92cx5q 208 6 antibiotics antibiotic NNS cord-000238-om92cx5q 208 7 in in IN cord-000238-om92cx5q 208 8 medicine medicine NN cord-000238-om92cx5q 208 9 and and CC cord-000238-om92cx5q 208 10 agriculture agriculture NN cord-000238-om92cx5q 208 11 , , , cord-000238-om92cx5q 208 12 however however RB cord-000238-om92cx5q 208 13 , , , cord-000238-om92cx5q 208 14 has have VBZ cord-000238-om92cx5q 208 15 created create VBN cord-000238-om92cx5q 208 16 a a DT cord-000238-om92cx5q 208 17 massive massive JJ cord-000238-om92cx5q 208 18 uncontrolled uncontrolled JJ cord-000238-om92cx5q 208 19 experiment experiment NN cord-000238-om92cx5q 208 20 in in IN cord-000238-om92cx5q 208 21 which which WDT cord-000238-om92cx5q 208 22 bacteria bacteria NNS cord-000238-om92cx5q 208 23 have have VBP cord-000238-om92cx5q 208 24 been be VBN cord-000238-om92cx5q 208 25 selected select VBN cord-000238-om92cx5q 208 26 to to TO cord-000238-om92cx5q 208 27 harbor harbor VB cord-000238-om92cx5q 208 28 antibiotic antibiotic JJ cord-000238-om92cx5q 208 29 resistance resistance NN cord-000238-om92cx5q 208 30 genes gene NNS cord-000238-om92cx5q 208 31 , , , cord-000238-om92cx5q 208 32 making make VBG cord-000238-om92cx5q 208 33 existing exist VBG cord-000238-om92cx5q 208 34 therapies therapy NNS cord-000238-om92cx5q 208 35 largely largely RB cord-000238-om92cx5q 208 36 ineffective ineffective JJ cord-000238-om92cx5q 208 37 in in IN cord-000238-om92cx5q 208 38 many many JJ cord-000238-om92cx5q 208 39 clinical clinical JJ cord-000238-om92cx5q 208 40 circumstances circumstance NNS cord-000238-om92cx5q 208 41 . . . cord-000238-om92cx5q 209 1 Bacterial bacterial JJ cord-000238-om92cx5q 209 2 resistance resistance NN cord-000238-om92cx5q 209 3 to to IN cord-000238-om92cx5q 209 4 antibiotics antibiotic NNS cord-000238-om92cx5q 209 5 and and CC cord-000238-om92cx5q 209 6 other other JJ cord-000238-om92cx5q 209 7 harmful harmful JJ cord-000238-om92cx5q 209 8 substances substance NNS cord-000238-om92cx5q 209 9 ͑e.g ͑e.g , cord-000238-om92cx5q 209 10 . . . cord-000238-om92cx5q 210 1 , , , cord-000238-om92cx5q 210 2 heavy heavy JJ cord-000238-om92cx5q 210 3 metals͒ metals͒ NN cord-000238-om92cx5q 210 4 often often RB cord-000238-om92cx5q 210 5 occurs occur VBZ cord-000238-om92cx5q 210 6 through through IN cord-000238-om92cx5q 210 7 genes gene NNS cord-000238-om92cx5q 210 8 carried carry VBN cord-000238-om92cx5q 210 9 on on IN cord-000238-om92cx5q 210 10 plasmids plasmid NNS cord-000238-om92cx5q 210 11 : : : cord-000238-om92cx5q 210 12 autonomously autonomously RB cord-000238-om92cx5q 210 13 replicating replicate VBG cord-000238-om92cx5q 210 14 DNA dna NN cord-000238-om92cx5q 210 15 elements element NNS cord-000238-om92cx5q 210 16 that that WDT cord-000238-om92cx5q 210 17 are be VBP cord-000238-om92cx5q 210 18 nearly nearly RB cord-000238-om92cx5q 210 19 ubiquitous ubiquitous JJ cord-000238-om92cx5q 210 20 in in IN cord-000238-om92cx5q 210 21 bacterial bacterial JJ cord-000238-om92cx5q 210 22 populations population NNS cord-000238-om92cx5q 210 23 . . . cord-000238-om92cx5q 211 1 Individual individual JJ cord-000238-om92cx5q 211 2 plasmids plasmid NNS cord-000238-om92cx5q 211 3 can can MD cord-000238-om92cx5q 211 4 sometimes sometimes RB cord-000238-om92cx5q 211 5 include include VB cord-000238-om92cx5q 211 6 multiple multiple JJ cord-000238-om92cx5q 211 7 genes gene NNS cord-000238-om92cx5q 211 8 conferring confer VBG cord-000238-om92cx5q 211 9 resistance resistance NN cord-000238-om92cx5q 211 10 to to IN cord-000238-om92cx5q 211 11 a a DT cord-000238-om92cx5q 211 12 variety variety NN cord-000238-om92cx5q 211 13 of of IN cord-000238-om92cx5q 211 14 antibiotics antibiotic NNS cord-000238-om92cx5q 211 15 . . . cord-000238-om92cx5q 212 1 Also also RB cord-000238-om92cx5q 212 2 , , , cord-000238-om92cx5q 212 3 plasmids plasmid NNS cord-000238-om92cx5q 212 4 can can MD cord-000238-om92cx5q 212 5 effectively effectively RB cord-000238-om92cx5q 212 6 spread spread VB cord-000238-om92cx5q 212 7 within within IN cord-000238-om92cx5q 212 8 and and CC cord-000238-om92cx5q 212 9 among among IN cord-000238-om92cx5q 212 10 bacteria bacteria NNS cord-000238-om92cx5q 212 11 populations population NNS cord-000238-om92cx5q 212 12 and and CC cord-000238-om92cx5q 212 13 species specie NNS cord-000238-om92cx5q 212 14 through through IN cord-000238-om92cx5q 212 15 conjugation conjugation NN cord-000238-om92cx5q 212 16 ͑cell ͑cell NN cord-000238-om92cx5q 212 17 - - HYPH cord-000238-om92cx5q 212 18 to to IN cord-000238-om92cx5q 212 19 - - HYPH cord-000238-om92cx5q 212 20 cell cell NN cord-000238-om92cx5q 212 21 horizontal horizontal NN cord-000238-om92cx5q 213 1 transfer͒. transfer͒. NNP cord-000238-om92cx5q 213 2 Together together RB cord-000238-om92cx5q 213 3 , , , cord-000238-om92cx5q 213 4 these these DT cord-000238-om92cx5q 213 5 features feature NNS cord-000238-om92cx5q 213 6 create create VBP cord-000238-om92cx5q 213 7 the the DT cord-000238-om92cx5q 213 8 capacity capacity NN cord-000238-om92cx5q 213 9 for for IN cord-000238-om92cx5q 213 10 rapid rapid JJ cord-000238-om92cx5q 213 11 spread spread NN cord-000238-om92cx5q 213 12 of of IN cord-000238-om92cx5q 213 13 multiple multiple JJ cord-000238-om92cx5q 213 14 drug drug NN cord-000238-om92cx5q 213 15 resistance resistance NN cord-000238-om92cx5q 213 16 in in IN cord-000238-om92cx5q 213 17 bacteria bacteria NNS cord-000238-om92cx5q 213 18 . . . cord-000238-om92cx5q 214 1 Furthermore furthermore RB cord-000238-om92cx5q 214 2 , , , cord-000238-om92cx5q 214 3 plasmid plasmid NN cord-000238-om92cx5q 214 4 - - HYPH cord-000238-om92cx5q 214 5 borne bear VBN cord-000238-om92cx5q 214 6 mechanisms mechanism NNS cord-000238-om92cx5q 215 1 ͑e.g ͑e.g , cord-000238-om92cx5q 215 2 . . . cord-000238-om92cx5q 216 1 , , , cord-000238-om92cx5q 216 2 postsegregational postsegregational NNP cord-000238-om92cx5q 216 3 killing͒ killing͒ NNP cord-000238-om92cx5q 216 4 often often RB cord-000238-om92cx5q 216 5 exist exist VBP cord-000238-om92cx5q 216 6 to to TO cord-000238-om92cx5q 216 7 ensure ensure VB cord-000238-om92cx5q 216 8 that that IN cord-000238-om92cx5q 216 9 vertical vertical JJ cord-000238-om92cx5q 216 10 transfer transfer NN cord-000238-om92cx5q 216 11 ͑plasmid ͑plasmid NN cord-000238-om92cx5q 216 12 inherit inherit VB cord-000238-om92cx5q 216 13 - - HYPH cord-000238-om92cx5q 216 14 ance͒ ance͒ NN cord-000238-om92cx5q 216 15 is be VBZ cord-000238-om92cx5q 216 16 reliably reliably RB cord-000238-om92cx5q 216 17 maintained maintain VBN cord-000238-om92cx5q 216 18 across across IN cord-000238-om92cx5q 216 19 host host NN cord-000238-om92cx5q 216 20 - - HYPH cord-000238-om92cx5q 216 21 cell cell NN cord-000238-om92cx5q 216 22 generations generation NNS cord-000238-om92cx5q 216 23 . . . cord-000238-om92cx5q 217 1 For for IN cord-000238-om92cx5q 217 2 these these DT cord-000238-om92cx5q 217 3 reasons reason NNS cord-000238-om92cx5q 217 4 , , , cord-000238-om92cx5q 217 5 plasmid plasmid NN cord-000238-om92cx5q 217 6 biology biology NN cord-000238-om92cx5q 217 7 has have VBZ cord-000238-om92cx5q 217 8 undoubtedly undoubtedly RB cord-000238-om92cx5q 217 9 contributed contribute VBN cord-000238-om92cx5q 217 10 to to IN cord-000238-om92cx5q 217 11 the the DT cord-000238-om92cx5q 217 12 current current JJ cord-000238-om92cx5q 217 13 crisis crisis NN cord-000238-om92cx5q 217 14 of of IN cord-000238-om92cx5q 217 15 ineffective ineffective JJ cord-000238-om92cx5q 217 16 antibiotic antibiotic JJ cord-000238-om92cx5q 217 17 therapy therapy NN cord-000238-om92cx5q 217 18 . . . cord-000238-om92cx5q 218 1 Plasmid plasmid NN cord-000238-om92cx5q 218 2 - - HYPH cord-000238-om92cx5q 218 3 bearing bear VBG cord-000238-om92cx5q 218 4 bacteria bacteria NNS cord-000238-om92cx5q 218 5 that that WDT cord-000238-om92cx5q 218 6 are be VBP cord-000238-om92cx5q 218 7 resistant resistant JJ cord-000238-om92cx5q 218 8 to to IN cord-000238-om92cx5q 218 9 a a DT cord-000238-om92cx5q 218 10 wide wide JJ cord-000238-om92cx5q 218 11 variety variety NN cord-000238-om92cx5q 218 12 of of IN cord-000238-om92cx5q 218 13 antibiotics antibiotic NNS cord-000238-om92cx5q 218 14 can can MD cord-000238-om92cx5q 218 15 be be VB cord-000238-om92cx5q 218 16 defined define VBN cord-000238-om92cx5q 218 17 as as IN cord-000238-om92cx5q 218 18 relatively relatively RB cord-000238-om92cx5q 218 19 environmentally environmentally RB cord-000238-om92cx5q 218 20 robust robust JJ cord-000238-om92cx5q 218 21 , , , cord-000238-om92cx5q 218 22 compared compare VBN cord-000238-om92cx5q 218 23 to to IN cord-000238-om92cx5q 218 24 bacteria bacteria NNS cord-000238-om92cx5q 218 25 strains strain NNS cord-000238-om92cx5q 218 26 unable unable JJ cord-000238-om92cx5q 218 27 to to TO cord-000238-om92cx5q 218 28 grow grow VB cord-000238-om92cx5q 218 29 in in IN cord-000238-om92cx5q 218 30 the the DT cord-000238-om92cx5q 218 31 presence presence NN cord-000238-om92cx5q 218 32 of of IN cord-000238-om92cx5q 218 33 antibiotic antibiotic JJ cord-000238-om92cx5q 218 34 challenges challenge NNS cord-000238-om92cx5q 218 35 . . . cord-000238-om92cx5q 219 1 Whether whether IN cord-000238-om92cx5q 219 2 this this DT cord-000238-om92cx5q 219 3 difference difference NN cord-000238-om92cx5q 219 4 arose arise VBD cord-000238-om92cx5q 219 5 largely largely RB cord-000238-om92cx5q 219 6 through through IN cord-000238-om92cx5q 219 7 selection selection NN cord-000238-om92cx5q 219 8 acting act VBG cord-000238-om92cx5q 219 9 at at IN cord-000238-om92cx5q 219 10 the the DT cord-000238-om92cx5q 219 11 level level NN cord-000238-om92cx5q 219 12 of of IN cord-000238-om92cx5q 219 13 bacteria bacteria NNS cord-000238-om92cx5q 219 14 , , , cord-000238-om92cx5q 219 15 or or CC cord-000238-om92cx5q 219 16 purely purely RB cord-000238-om92cx5q 219 17 at at IN cord-000238-om92cx5q 219 18 the the DT cord-000238-om92cx5q 219 19 level level NN cord-000238-om92cx5q 219 20 of of IN cord-000238-om92cx5q 219 21 plasmids plasmid NNS cord-000238-om92cx5q 219 22 , , , cord-000238-om92cx5q 219 23 is be VBZ cord-000238-om92cx5q 219 24 unclear unclear JJ cord-000238-om92cx5q 219 25 . . . cord-000238-om92cx5q 220 1 In in IN cord-000238-om92cx5q 220 2 the the DT cord-000238-om92cx5q 220 3 former former JJ cord-000238-om92cx5q 220 4 case case NN cord-000238-om92cx5q 220 5 , , , cord-000238-om92cx5q 220 6 acquisition acquisition NN cord-000238-om92cx5q 220 7 and and CC cord-000238-om92cx5q 220 8 maintenance maintenance NN cord-000238-om92cx5q 220 9 of of IN cord-000238-om92cx5q 220 10 a a DT cord-000238-om92cx5q 220 11 large large JJ cord-000238-om92cx5q 220 12 number number NN cord-000238-om92cx5q 220 13 of of IN cord-000238-om92cx5q 220 14 resistance resistance NN cord-000238-om92cx5q 220 15 genes gene NNS cord-000238-om92cx5q 220 16 could could MD cord-000238-om92cx5q 220 17 be be VB cord-000238-om92cx5q 220 18 evolved evolve VBN cord-000238-om92cx5q 220 19 " " `` cord-000238-om92cx5q 220 20 bet bet NN cord-000238-om92cx5q 220 21 - - HYPH cord-000238-om92cx5q 220 22 hedging hedging NN cord-000238-om92cx5q 220 23 " " '' cord-000238-om92cx5q 220 24 in in IN cord-000238-om92cx5q 220 25 bacteria bacteria NNS cord-000238-om92cx5q 220 26 , , , cord-000238-om92cx5q 220 27 where where WRB cord-000238-om92cx5q 220 28 selected select VBN cord-000238-om92cx5q 220 29 retention retention NN cord-000238-om92cx5q 220 30 of of IN cord-000238-om92cx5q 220 31 these these DT cord-000238-om92cx5q 220 32 alleles allele NNS cord-000238-om92cx5q 220 33 occurs occur VBZ cord-000238-om92cx5q 220 34 despite despite IN cord-000238-om92cx5q 220 35 only only RB cord-000238-om92cx5q 220 36 rare rare JJ cord-000238-om92cx5q 220 37 circumstances circumstance NNS cord-000238-om92cx5q 220 38 when when WRB cord-000238-om92cx5q 220 39 they -PRON- PRP cord-000238-om92cx5q 220 40 are be VBP cord-000238-om92cx5q 220 41 actually actually RB cord-000238-om92cx5q 220 42 needed need VBN cord-000238-om92cx5q 220 43 to to TO cord-000238-om92cx5q 220 44 protect protect VB cord-000238-om92cx5q 220 45 against against IN cord-000238-om92cx5q 220 46 antibiotics antibiotic NNS cord-000238-om92cx5q 220 47 . . . cord-000238-om92cx5q 221 1 Alternatively alternatively RB cord-000238-om92cx5q 221 2 , , , cord-000238-om92cx5q 221 3 selection selection NN cord-000238-om92cx5q 221 4 may may MD cord-000238-om92cx5q 221 5 be be VB cord-000238-om92cx5q 221 6 acting act VBG cord-000238-om92cx5q 221 7 purely purely RB cord-000238-om92cx5q 221 8 at at IN cord-000238-om92cx5q 221 9 the the DT cord-000238-om92cx5q 221 10 level level NN cord-000238-om92cx5q 221 11 of of IN cord-000238-om92cx5q 221 12 plasmids plasmid NNS cord-000238-om92cx5q 221 13 , , , cord-000238-om92cx5q 221 14 favoring favor VBG cord-000238-om92cx5q 221 15 infectious infectious JJ cord-000238-om92cx5q 221 16 genetic genetic JJ cord-000238-om92cx5q 221 17 elements element NNS cord-000238-om92cx5q 221 18 that that WDT cord-000238-om92cx5q 221 19 collect collect VBP cord-000238-om92cx5q 221 20 resistance resistance NN cord-000238-om92cx5q 221 21 genes gene NNS cord-000238-om92cx5q 221 22 which which WDT cord-000238-om92cx5q 221 23 may may MD cord-000238-om92cx5q 221 24 be be VB cord-000238-om92cx5q 221 25 beneficial beneficial JJ cord-000238-om92cx5q 221 26 for for IN cord-000238-om92cx5q 221 27 " " `` cord-000238-om92cx5q 221 28 paying pay VBG cord-000238-om92cx5q 221 29 the the DT cord-000238-om92cx5q 221 30 rent rent NN cord-000238-om92cx5q 221 31 " " '' cord-000238-om92cx5q 221 32 to to IN cord-000238-om92cx5q 221 33 their -PRON- PRP$ cord-000238-om92cx5q 221 34 bacterial bacterial JJ cord-000238-om92cx5q 221 35 hosts host NNS cord-000238-om92cx5q 221 36 , , , cord-000238-om92cx5q 221 37 as as IN cord-000238-om92cx5q 221 38 plasmids plasmid NNS cord-000238-om92cx5q 221 39 can can MD cord-000238-om92cx5q 221 40 not not RB cord-000238-om92cx5q 221 41 easily easily RB cord-000238-om92cx5q 221 42 control control VB cord-000238-om92cx5q 221 43 the the DT cord-000238-om92cx5q 221 44 host host NN cord-000238-om92cx5q 221 45 backgrounds background NNS cord-000238-om92cx5q 221 46 and and CC cord-000238-om92cx5q 221 47 environments environment NNS cord-000238-om92cx5q 221 48 in in IN cord-000238-om92cx5q 221 49 which which WDT cord-000238-om92cx5q 221 50 they -PRON- PRP cord-000238-om92cx5q 221 51 reside reside VBP cord-000238-om92cx5q 221 52 . . . cord-000238-om92cx5q 222 1 Last last RB cord-000238-om92cx5q 222 2 , , , cord-000238-om92cx5q 222 3 selection selection NN cord-000238-om92cx5q 222 4 may may MD cord-000238-om92cx5q 222 5 be be VB cord-000238-om92cx5q 222 6 acting act VBG cord-000238-om92cx5q 222 7 on on IN cord-000238-om92cx5q 222 8 the the DT cord-000238-om92cx5q 222 9 symbiotic symbiotic JJ cord-000238-om92cx5q 222 10 microbe microbe NN cord-000238-om92cx5q 222 11 created create VBN cord-000238-om92cx5q 222 12 through through IN cord-000238-om92cx5q 222 13 plasmid plasmid NN cord-000238-om92cx5q 222 14 / / SYM cord-000238-om92cx5q 222 15 cell cell NNP cord-000238-om92cx5q 222 16 association association NNP cord-000238-om92cx5q 222 17 , , , cord-000238-om92cx5q 222 18 where where WRB cord-000238-om92cx5q 222 19 the the DT cord-000238-om92cx5q 222 20 combined combined JJ cord-000238-om92cx5q 222 21 interests interest NNS cord-000238-om92cx5q 222 22 of of IN cord-000238-om92cx5q 222 23 plasmids plasmid NNS cord-000238-om92cx5q 222 24 and and CC cord-000238-om92cx5q 222 25 their -PRON- PRP$ cord-000238-om92cx5q 222 26 hosts host NNS cord-000238-om92cx5q 222 27 may may MD cord-000238-om92cx5q 222 28 sometimes sometimes RB cord-000238-om92cx5q 222 29 coincide coincide VB cord-000238-om92cx5q 222 30 and and CC cord-000238-om92cx5q 222 31 other other JJ cord-000238-om92cx5q 222 32 times time NNS cord-000238-om92cx5q 222 33 conflict conflict NN cord-000238-om92cx5q 222 34 . . . cord-000238-om92cx5q 223 1 Regardless regardless RB cord-000238-om92cx5q 223 2 , , , cord-000238-om92cx5q 223 3 environmentally environmentally RB cord-000238-om92cx5q 223 4 robust robust JJ cord-000238-om92cx5q 223 5 bacterial bacterial JJ cord-000238-om92cx5q 223 6 pathogens pathogen NNS cord-000238-om92cx5q 223 7 of of IN cord-000238-om92cx5q 223 8 humans human NNS cord-000238-om92cx5q 223 9 must must MD cord-000238-om92cx5q 223 10 have have VB cord-000238-om92cx5q 223 11 been be VBN cord-000238-om92cx5q 223 12 selectively selectively RB cord-000238-om92cx5q 223 13 favored favor VBN cord-000238-om92cx5q 223 14 during during IN cord-000238-om92cx5q 223 15 the the DT cord-000238-om92cx5q 223 16 past past JJ cord-000238-om92cx5q 223 17 halfcentury halfcentury NNP cord-000238-om92cx5q 223 18 , , , cord-000238-om92cx5q 223 19 or or CC cord-000238-om92cx5q 223 20 the the DT cord-000238-om92cx5q 223 21 ineffectiveness ineffectiveness NN cord-000238-om92cx5q 223 22 of of IN cord-000238-om92cx5q 223 23 antibiotic antibiotic JJ cord-000238-om92cx5q 223 24 therapy therapy NN cord-000238-om92cx5q 223 25 would would MD cord-000238-om92cx5q 223 26 not not RB cord-000238-om92cx5q 223 27 be be VB cord-000238-om92cx5q 223 28 a a DT cord-000238-om92cx5q 223 29 prominent prominent JJ cord-000238-om92cx5q 223 30 issue issue NN cord-000238-om92cx5q 223 31 today today NN cord-000238-om92cx5q 223 32 . . . cord-000238-om92cx5q 224 1 The the DT cord-000238-om92cx5q 224 2 evolutionary evolutionary JJ cord-000238-om92cx5q 224 3 consequences consequence NNS cord-000238-om92cx5q 224 4 of of IN cord-000238-om92cx5q 224 5 environmental environmental JJ cord-000238-om92cx5q 224 6 robustness robustness NN cord-000238-om92cx5q 224 7 in in IN cord-000238-om92cx5q 224 8 resistant resistant JJ cord-000238-om92cx5q 224 9 bacteria bacteria NNS cord-000238-om92cx5q 224 10 have have VBP cord-000238-om92cx5q 224 11 not not RB cord-000238-om92cx5q 224 12 been be VBN cord-000238-om92cx5q 224 13 widely widely RB cord-000238-om92cx5q 224 14 addressed address VBN cord-000238-om92cx5q 224 15 . . . cord-000238-om92cx5q 225 1 Bacteria Bacteria NNS cord-000238-om92cx5q 225 2 able able JJ cord-000238-om92cx5q 225 3 to to TO cord-000238-om92cx5q 225 4 robustly robustly RB cord-000238-om92cx5q 225 5 grow grow VB cord-000238-om92cx5q 225 6 in in IN cord-000238-om92cx5q 225 7 a a DT cord-000238-om92cx5q 225 8 variety variety NN cord-000238-om92cx5q 225 9 of of IN cord-000238-om92cx5q 225 10 antibiotic antibiotic JJ cord-000238-om92cx5q 225 11 environments environment NNS cord-000238-om92cx5q 225 12 are be VBP cord-000238-om92cx5q 225 13 generalists generalist NNS cord-000238-om92cx5q 225 14 according accord VBG cord-000238-om92cx5q 225 15 to to IN cord-000238-om92cx5q 225 16 the the DT cord-000238-om92cx5q 225 17 ecological ecological JJ cord-000238-om92cx5q 225 18 definition definition NN cord-000238-om92cx5q 225 19 of of IN cord-000238-om92cx5q 225 20 niche niche NN cord-000238-om92cx5q 225 21 breadth breadth NN cord-000238-om92cx5q 225 22 . . . cord-000238-om92cx5q 226 1 This this DT cord-000238-om92cx5q 226 2 niche niche NN cord-000238-om92cx5q 226 3 breadth breadth NN cord-000238-om92cx5q 226 4 may may MD cord-000238-om92cx5q 226 5 have have VB cord-000238-om92cx5q 226 6 been be VBN cord-000238-om92cx5q 226 7 directly directly RB cord-000238-om92cx5q 226 8 molded mold VBN cord-000238-om92cx5q 226 9 through through IN cord-000238-om92cx5q 226 10 selection selection NN cord-000238-om92cx5q 226 11 if if IN cord-000238-om92cx5q 226 12 the the DT cord-000238-om92cx5q 226 13 bacteria bacteria NNS cord-000238-om92cx5q 226 14 descended descend VBD cord-000238-om92cx5q 226 15 from from IN cord-000238-om92cx5q 226 16 a a DT cord-000238-om92cx5q 226 17 lineage lineage NN cord-000238-om92cx5q 226 18 exposed expose VBN cord-000238-om92cx5q 226 19 to to IN cord-000238-om92cx5q 226 20 the the DT cord-000238-om92cx5q 226 21 various various JJ cord-000238-om92cx5q 226 22 antibiotics antibiotic NNS cord-000238-om92cx5q 226 23 . . . cord-000238-om92cx5q 227 1 Alternatively alternatively RB cord-000238-om92cx5q 227 2 , , , cord-000238-om92cx5q 227 3 the the DT cord-000238-om92cx5q 227 4 niche niche NN cord-000238-om92cx5q 227 5 breadth breadth NN cord-000238-om92cx5q 227 6 may may MD cord-000238-om92cx5q 227 7 be be VB cord-000238-om92cx5q 227 8 fortuitous fortuitous JJ cord-000238-om92cx5q 227 9 if if IN cord-000238-om92cx5q 227 10 the the DT cord-000238-om92cx5q 227 11 bacteria bacteria NNS cord-000238-om92cx5q 227 12 obtained obtain VBD cord-000238-om92cx5q 227 13 a a DT cord-000238-om92cx5q 227 14 plasmid plasmid NN cord-000238-om92cx5q 227 15 harboring harbor VBG cord-000238-om92cx5q 227 16 multiple multiple JJ cord-000238-om92cx5q 227 17 - - HYPH cord-000238-om92cx5q 227 18 resistance resistance NN cord-000238-om92cx5q 227 19 genes gene NNS cord-000238-om92cx5q 227 20 that that WDT cord-000238-om92cx5q 227 21 ran run VBD cord-000238-om92cx5q 227 22 the the DT cord-000238-om92cx5q 227 23 gauntlet gauntlet NN cord-000238-om92cx5q 227 24 of of IN cord-000238-om92cx5q 227 25 selection selection NN cord-000238-om92cx5q 227 26 in in IN cord-000238-om92cx5q 227 27 other other JJ cord-000238-om92cx5q 227 28 contexts context NNS cord-000238-om92cx5q 227 29 . . . cord-000238-om92cx5q 228 1 No no RB cord-000238-om92cx5q 228 2 matter matter RB cord-000238-om92cx5q 228 3 the the DT cord-000238-om92cx5q 228 4 circumstance circumstance NN cord-000238-om92cx5q 228 5 , , , cord-000238-om92cx5q 228 6 we -PRON- PRP cord-000238-om92cx5q 228 7 noted note VBD cord-000238-om92cx5q 228 8 above above IN cord-000238-om92cx5q 228 9 that that DT cord-000238-om92cx5q 229 1 some some DT cord-000238-om92cx5q 229 2 theory theory NN cord-000238-om92cx5q 229 3 predicts predict VBZ cord-000238-om92cx5q 229 4 evolved evolved JJ cord-000238-om92cx5q 229 5 generalization generalization NN cord-000238-om92cx5q 229 6 may may MD cord-000238-om92cx5q 229 7 be be VB cord-000238-om92cx5q 229 8 particularly particularly RB cord-000238-om92cx5q 229 9 useful useful JJ cord-000238-om92cx5q 229 10 if if IN cord-000238-om92cx5q 229 11 organisms organism NNS cord-000238-om92cx5q 229 12 tend tend VBP cord-000238-om92cx5q 229 13 to to TO cord-000238-om92cx5q 229 14 encounter encounter VB cord-000238-om92cx5q 229 15 highly highly RB cord-000238-om92cx5q 229 16 variable variable JJ cord-000238-om92cx5q 229 17 environments environment NNS cord-000238-om92cx5q 229 18 . . . cord-000238-om92cx5q 230 1 41 41 CD cord-000238-om92cx5q 231 1 The the DT cord-000238-om92cx5q 231 2 phenomenon phenomenon NN cord-000238-om92cx5q 231 3 of of IN cord-000238-om92cx5q 231 4 drug drug NN cord-000238-om92cx5q 231 5 cross cross NN cord-000238-om92cx5q 231 6 - - NN cord-000238-om92cx5q 231 7 resistance resistance NN cord-000238-om92cx5q 231 8 and and CC cord-000238-om92cx5q 231 9 possible possible JJ cord-000238-om92cx5q 231 10 evolutionary evolutionary JJ cord-000238-om92cx5q 231 11 modification modification NN cord-000238-om92cx5q 231 12 of of IN cord-000238-om92cx5q 231 13 a a DT cord-000238-om92cx5q 231 14 resistance resistance NN cord-000238-om92cx5q 231 15 allele allele NN cord-000238-om92cx5q 231 16 allowing allow VBG cord-000238-om92cx5q 231 17 survival survival NN cord-000238-om92cx5q 231 18 in in IN cord-000238-om92cx5q 231 19 altered altered JJ cord-000238-om92cx5q 231 20 circumstances circumstance NNS cord-000238-om92cx5q 231 21 ͑i.e ͑i.e . cord-000238-om92cx5q 231 22 . . . cord-000238-om92cx5q 232 1 , , , cord-000238-om92cx5q 232 2 evolutionary evolutionary JJ cord-000238-om92cx5q 232 3 innovation͒ innovation͒ NNP cord-000238-om92cx5q 232 4 lend lend VB cord-000238-om92cx5q 232 5 plausibility plausibility NN cord-000238-om92cx5q 232 6 to to IN cord-000238-om92cx5q 232 7 the the DT cord-000238-om92cx5q 232 8 concept concept NN cord-000238-om92cx5q 232 9 that that IN cord-000238-om92cx5q 232 10 multiple multiple JJ cord-000238-om92cx5q 232 11 - - HYPH cord-000238-om92cx5q 232 12 resistance resistance NN cord-000238-om92cx5q 232 13 strains strain NNS cord-000238-om92cx5q 232 14 by by IN cord-000238-om92cx5q 232 15 an an DT cord-000238-om92cx5q 232 16 evolvability evolvability NN cord-000238-om92cx5q 232 17 advantage advantage NN cord-000238-om92cx5q 232 18 would would MD cord-000238-om92cx5q 232 19 better better RB cord-000238-om92cx5q 232 20 thrive thrive VB cord-000238-om92cx5q 232 21 in in IN cord-000238-om92cx5q 232 22 the the DT cord-000238-om92cx5q 232 23 face face NN cord-000238-om92cx5q 232 24 of of IN cord-000238-om92cx5q 232 25 novel novel JJ cord-000238-om92cx5q 232 26 drugs drug NNS cord-000238-om92cx5q 232 27 . . . cord-000238-om92cx5q 233 1 We -PRON- PRP cord-000238-om92cx5q 233 2 are be VBP cord-000238-om92cx5q 233 3 unaware unaware JJ cord-000238-om92cx5q 233 4 of of IN cord-000238-om92cx5q 233 5 any any DT cord-000238-om92cx5q 233 6 studies study NNS cord-000238-om92cx5q 233 7 addressing address VBG cord-000238-om92cx5q 233 8 the the DT cord-000238-om92cx5q 233 9 relationship relationship NN cord-000238-om92cx5q 233 10 between between IN cord-000238-om92cx5q 233 11 number number NN cord-000238-om92cx5q 233 12 or or CC cord-000238-om92cx5q 233 13 diversity diversity NN cord-000238-om92cx5q 233 14 of of IN cord-000238-om92cx5q 233 15 resistance resistance NN cord-000238-om92cx5q 233 16 genes gene NNS cord-000238-om92cx5q 233 17 in in IN cord-000238-om92cx5q 233 18 bacteria bacteria NNS cord-000238-om92cx5q 233 19 and and CC cord-000238-om92cx5q 233 20 the the DT cord-000238-om92cx5q 233 21 evolvability evolvability NN cord-000238-om92cx5q 233 22 of of IN cord-000238-om92cx5q 233 23 bacterial bacterial JJ cord-000238-om92cx5q 233 24 pathogens pathogen NNS cord-000238-om92cx5q 233 25 in in IN cord-000238-om92cx5q 233 26 new new JJ cord-000238-om92cx5q 233 27 environments environment NNS cord-000238-om92cx5q 233 28 . . . cord-000238-om92cx5q 234 1 Such such JJ cord-000238-om92cx5q 234 2 research research NN cord-000238-om92cx5q 234 3 would would MD cord-000238-om92cx5q 234 4 be be VB cord-000238-om92cx5q 234 5 highly highly RB cord-000238-om92cx5q 234 6 useful useful JJ cord-000238-om92cx5q 234 7 for for IN cord-000238-om92cx5q 234 8 examining examine VBG cord-000238-om92cx5q 234 9 the the DT cord-000238-om92cx5q 234 10 evolutionary evolutionary JJ cord-000238-om92cx5q 234 11 processes process NNS cord-000238-om92cx5q 234 12 underlying underlie VBG cord-000238-om92cx5q 234 13 the the DT cord-000238-om92cx5q 234 14 widespread widespread JJ cord-000238-om92cx5q 234 15 success success NN cord-000238-om92cx5q 234 16 of of IN cord-000238-om92cx5q 234 17 resistant resistant JJ cord-000238-om92cx5q 234 18 bacteria bacteria NNS cord-000238-om92cx5q 234 19 . . . cord-000238-om92cx5q 235 1 We -PRON- PRP cord-000238-om92cx5q 235 2 note note VBP cord-000238-om92cx5q 235 3 that that IN cord-000238-om92cx5q 235 4 existing exist VBG cord-000238-om92cx5q 235 5 data datum NNS cord-000238-om92cx5q 235 6 already already RB cord-000238-om92cx5q 235 7 suggest suggest VBP cord-000238-om92cx5q 235 8 that that IN cord-000238-om92cx5q 235 9 genetic genetic JJ cord-000238-om92cx5q 235 10 robustness robustness NN cord-000238-om92cx5q 235 11 is be VBZ cord-000238-om92cx5q 235 12 relevant relevant JJ cord-000238-om92cx5q 235 13 to to IN cord-000238-om92cx5q 235 14 the the DT cord-000238-om92cx5q 235 15 evolution evolution NN cord-000238-om92cx5q 235 16 of of IN cord-000238-om92cx5q 235 17 antibiotic antibiotic JJ cord-000238-om92cx5q 235 18 resistance resistance NN cord-000238-om92cx5q 235 19 in in IN cord-000238-om92cx5q 235 20 bacteria bacteria NNS cord-000238-om92cx5q 235 21 . . . cord-000238-om92cx5q 236 1 Research research NN cord-000238-om92cx5q 236 2 shows show VBZ cord-000238-om92cx5q 236 3 that that IN cord-000238-om92cx5q 236 4 compensatory compensatory JJ cord-000238-om92cx5q 236 5 mutation mutation NN cord-000238-om92cx5q 236 6 is be VBZ cord-000238-om92cx5q 236 7 an an DT cord-000238-om92cx5q 236 8 important important JJ cord-000238-om92cx5q 236 9 underlying underlying JJ cord-000238-om92cx5q 236 10 genetic genetic JJ cord-000238-om92cx5q 236 11 mechanism mechanism NN cord-000238-om92cx5q 236 12 for for IN cord-000238-om92cx5q 236 13 maintenance maintenance NN cord-000238-om92cx5q 236 14 of of IN cord-000238-om92cx5q 236 15 resistance resistance NN cord-000238-om92cx5q 236 16 in in IN cord-000238-om92cx5q 236 17 the the DT cord-000238-om92cx5q 236 18 absence absence NN cord-000238-om92cx5q 236 19 of of IN cord-000238-om92cx5q 236 20 antibiotic antibiotic JJ cord-000238-om92cx5q 236 21 selection selection NN cord-000238-om92cx5q 236 22 . . . cord-000238-om92cx5q 237 1 53 53 CD cord-000238-om92cx5q 238 1 This this DT cord-000238-om92cx5q 238 2 epistasis epistasis NN cord-000238-om92cx5q 238 3 mechanism mechanism NN cord-000238-om92cx5q 238 4 explains explain VBZ cord-000238-om92cx5q 238 5 how how WRB cord-000238-om92cx5q 238 6 a a DT cord-000238-om92cx5q 238 7 resistance resistance NN cord-000238-om92cx5q 238 8 gene gene NN cord-000238-om92cx5q 238 9 that that WDT cord-000238-om92cx5q 238 10 is be VBZ cord-000238-om92cx5q 238 11 costly costly JJ cord-000238-om92cx5q 238 12 for for IN cord-000238-om92cx5q 238 13 bacterial bacterial JJ cord-000238-om92cx5q 238 14 growth growth NN cord-000238-om92cx5q 238 15 in in IN cord-000238-om92cx5q 238 16 absence absence NN cord-000238-om92cx5q 238 17 of of IN cord-000238-om92cx5q 238 18 an an DT cord-000238-om92cx5q 238 19 antibiotic antibiotic NN cord-000238-om92cx5q 238 20 may may MD cord-000238-om92cx5q 238 21 be be VB cord-000238-om92cx5q 238 22 compensated compensate VBN cord-000238-om92cx5q 238 23 by by IN cord-000238-om92cx5q 238 24 one one CD cord-000238-om92cx5q 238 25 or or CC cord-000238-om92cx5q 238 26 more more JJR cord-000238-om92cx5q 238 27 mutations mutation NNS cord-000238-om92cx5q 238 28 in in IN cord-000238-om92cx5q 238 29 the the DT cord-000238-om92cx5q 238 30 plasmid plasmid NN cord-000238-om92cx5q 238 31 or or CC cord-000238-om92cx5q 238 32 bacterial bacterial JJ cord-000238-om92cx5q 238 33 chromosome chromosome NN cord-000238-om92cx5q 238 34 , , , cord-000238-om92cx5q 238 35 effectively effectively RB cord-000238-om92cx5q 238 36 eliminating eliminate VBG cord-000238-om92cx5q 238 37 the the DT cord-000238-om92cx5q 238 38 cost cost NN cord-000238-om92cx5q 238 39 of of IN cord-000238-om92cx5q 238 40 carrying carry VBG cord-000238-om92cx5q 238 41 the the DT cord-000238-om92cx5q 238 42 resistance resistance NN cord-000238-om92cx5q 238 43 gene gene NN cord-000238-om92cx5q 238 44 ͑or ͑or VBZ cord-000238-om92cx5q 238 45 the the DT cord-000238-om92cx5q 238 46 plasmid plasmid NN cord-000238-om92cx5q 238 47 on on IN cord-000238-om92cx5q 238 48 which which WDT cord-000238-om92cx5q 238 49 it -PRON- PRP cord-000238-om92cx5q 238 50 re re VBD cord-000238-om92cx5q 238 51 - - JJ cord-000238-om92cx5q 238 52 sides͒ sides͒ JJ cord-000238-om92cx5q 238 53 when when WRB cord-000238-om92cx5q 238 54 no no DT cord-000238-om92cx5q 238 55 antibiotic antibiotic NN cord-000238-om92cx5q 238 56 is be VBZ cord-000238-om92cx5q 238 57 present present JJ cord-000238-om92cx5q 238 58 . . . cord-000238-om92cx5q 239 1 If if IN cord-000238-om92cx5q 239 2 a a DT cord-000238-om92cx5q 239 3 bacterial bacterial JJ cord-000238-om92cx5q 239 4 strain strain NN cord-000238-om92cx5q 239 5 contains contain VBZ cord-000238-om92cx5q 239 6 a a DT cord-000238-om92cx5q 239 7 compensatory compensatory JJ cord-000238-om92cx5q 239 8 mutation mutation NN cord-000238-om92cx5q 239 9 that that WDT cord-000238-om92cx5q 239 10 interacts interact VBZ cord-000238-om92cx5q 239 11 to to TO cord-000238-om92cx5q 239 12 reduce reduce VB cord-000238-om92cx5q 239 13 the the DT cord-000238-om92cx5q 239 14 cost cost NN cord-000238-om92cx5q 239 15 of of IN cord-000238-om92cx5q 239 16 various various JJ cord-000238-om92cx5q 239 17 different different JJ cord-000238-om92cx5q 239 18 resistance resistance NN cord-000238-om92cx5q 239 19 genes gene NNS cord-000238-om92cx5q 239 20 , , , cord-000238-om92cx5q 239 21 then then RB cord-000238-om92cx5q 239 22 this this DT cord-000238-om92cx5q 239 23 epistatic epistatic JJ cord-000238-om92cx5q 239 24 mutation mutation NN cord-000238-om92cx5q 239 25 would would MD cord-000238-om92cx5q 239 26 provide provide VB cord-000238-om92cx5q 239 27 an an DT cord-000238-om92cx5q 239 28 example example NN cord-000238-om92cx5q 239 29 of of IN cord-000238-om92cx5q 239 30 a a DT cord-000238-om92cx5q 239 31 genetic genetic JJ cord-000238-om92cx5q 239 32 - - HYPH cord-000238-om92cx5q 239 33 robustness robustness NN cord-000238-om92cx5q 239 34 allele allele NN cord-000238-om92cx5q 239 35 responsible responsible JJ cord-000238-om92cx5q 239 36 for for IN cord-000238-om92cx5q 239 37 environmental environmental JJ cord-000238-om92cx5q 239 38 robustness robustness NN cord-000238-om92cx5q 239 39 across across IN cord-000238-om92cx5q 239 40 antibiotic antibiotic JJ cord-000238-om92cx5q 239 41 environments environment NNS cord-000238-om92cx5q 239 42 . . . cord-000238-om92cx5q 240 1 For for IN cord-000238-om92cx5q 240 2 example example NN cord-000238-om92cx5q 240 3 , , , cord-000238-om92cx5q 240 4 the the DT cord-000238-om92cx5q 240 5 multiple multiple JJ cord-000238-om92cx5q 240 6 antibiotic antibiotic JJ cord-000238-om92cx5q 240 7 resistance resistance NN cord-000238-om92cx5q 240 8 locus locus NN cord-000238-om92cx5q 240 9 in in IN cord-000238-om92cx5q 240 10 E. E. NNP cord-000238-om92cx5q 240 11 coli coli NNS cord-000238-om92cx5q 240 12 and and CC cord-000238-om92cx5q 240 13 several several JJ cord-000238-om92cx5q 240 14 species specie NNS cord-000238-om92cx5q 240 15 of of IN cord-000238-om92cx5q 240 16 Salmonella Salmonella NNP cord-000238-om92cx5q 240 17 is be VBZ cord-000238-om92cx5q 240 18 involved involve VBN cord-000238-om92cx5q 240 19 with with IN cord-000238-om92cx5q 240 20 production production NN cord-000238-om92cx5q 240 21 of of IN cord-000238-om92cx5q 240 22 an an DT cord-000238-om92cx5q 240 23 efflux efflux NN cord-000238-om92cx5q 240 24 pump pump NN cord-000238-om92cx5q 240 25 that that WDT cord-000238-om92cx5q 240 26 removes remove VBZ cord-000238-om92cx5q 240 27 various various JJ cord-000238-om92cx5q 240 28 antibiotics antibiotic NNS cord-000238-om92cx5q 240 29 from from IN cord-000238-om92cx5q 240 30 the the DT cord-000238-om92cx5q 240 31 cell cell NN cord-000238-om92cx5q 240 32 , , , cord-000238-om92cx5q 240 33 affording afford VBG cord-000238-om92cx5q 240 34 low low JJ cord-000238-om92cx5q 240 35 - - HYPH cord-000238-om92cx5q 240 36 level level NN cord-000238-om92cx5q 240 37 clinical clinical JJ cord-000238-om92cx5q 240 38 resistance resistance NN cord-000238-om92cx5q 240 39 . . . cord-000238-om92cx5q 241 1 54 54 CD cord-000238-om92cx5q 242 1 However however RB cord-000238-om92cx5q 242 2 , , , cord-000238-om92cx5q 242 3 this this DT cord-000238-om92cx5q 242 4 mode mode NN cord-000238-om92cx5q 242 5 of of IN cord-000238-om92cx5q 242 6 resistance resistance NN cord-000238-om92cx5q 242 7 can can MD cord-000238-om92cx5q 242 8 be be VB cord-000238-om92cx5q 242 9 rather rather RB cord-000238-om92cx5q 242 10 costly costly JJ cord-000238-om92cx5q 242 11 if if IN cord-000238-om92cx5q 242 12 transport transport NN cord-000238-om92cx5q 242 13 in in IN cord-000238-om92cx5q 242 14 and and CC cord-000238-om92cx5q 242 15 out out IN cord-000238-om92cx5q 242 16 of of IN cord-000238-om92cx5q 242 17 the the DT cord-000238-om92cx5q 242 18 cell cell NN cord-000238-om92cx5q 242 19 is be VBZ cord-000238-om92cx5q 242 20 not not RB cord-000238-om92cx5q 242 21 tightly tightly RB cord-000238-om92cx5q 242 22 regulated regulate VBN cord-000238-om92cx5q 242 23 . . . cord-000238-om92cx5q 243 1 Evidence evidence NN cord-000238-om92cx5q 243 2 suggests suggest VBZ cord-000238-om92cx5q 243 3 that that IN cord-000238-om92cx5q 243 4 the the DT cord-000238-om92cx5q 243 5 low low JJ cord-000238-om92cx5q 243 6 - - HYPH cord-000238-om92cx5q 243 7 level level NN cord-000238-om92cx5q 243 8 resistance resistance NN cord-000238-om92cx5q 243 9 may may MD cord-000238-om92cx5q 243 10 be be VB cord-000238-om92cx5q 243 11 a a DT cord-000238-om92cx5q 243 12 stepping stepping JJ cord-000238-om92cx5q 243 13 - - HYPH cord-000238-om92cx5q 243 14 stone stone NN cord-000238-om92cx5q 243 15 to to IN cord-000238-om92cx5q 243 16 more more RBR cord-000238-om92cx5q 243 17 finely finely RB cord-000238-om92cx5q 243 18 tuned tune VBN cord-000238-om92cx5q 243 19 evolved evolve VBN cord-000238-om92cx5q 243 20 mechanisms mechanism NNS cord-000238-om92cx5q 243 21 allowing allow VBG cord-000238-om92cx5q 243 22 greater great JJR cord-000238-om92cx5q 243 23 resistance resistance NN cord-000238-om92cx5q 243 24 , , , cord-000238-om92cx5q 243 25 55 55 CD cord-000238-om92cx5q 243 26 and and CC cord-000238-om92cx5q 243 27 we -PRON- PRP cord-000238-om92cx5q 243 28 can can MD cord-000238-om92cx5q 243 29 conceive conceive VB cord-000238-om92cx5q 243 30 that that IN cord-000238-om92cx5q 243 31 genetic genetic JJ cord-000238-om92cx5q 243 32 changes change NNS cord-000238-om92cx5q 243 33 simultaneously simultaneously RB cord-000238-om92cx5q 243 34 compensating compensate VBG cord-000238-om92cx5q 243 35 to to TO cord-000238-om92cx5q 243 36 reduce reduce VB cord-000238-om92cx5q 243 37 the the DT cord-000238-om92cx5q 243 38 cost cost NN cord-000238-om92cx5q 243 39 while while IN cord-000238-om92cx5q 243 40 maintaining maintain VBG cord-000238-om92cx5q 243 41 the the DT cord-000238-om92cx5q 243 42 broad broad JJ cord-000238-om92cx5q 243 43 resistance resistance NN cord-000238-om92cx5q 243 44 would would MD cord-000238-om92cx5q 243 45 provide provide VB cord-000238-om92cx5q 243 46 an an DT cord-000238-om92cx5q 243 47 example example NN cord-000238-om92cx5q 243 48 of of IN cord-000238-om92cx5q 243 49 a a DT cord-000238-om92cx5q 243 50 genetic genetic JJ cord-000238-om92cx5q 243 51 - - HYPH cord-000238-om92cx5q 243 52 robustness robustness NN cord-000238-om92cx5q 243 53 allele allele NN cord-000238-om92cx5q 243 54 . . . cord-000238-om92cx5q 244 1 Many many JJ cord-000238-om92cx5q 244 2 of of IN cord-000238-om92cx5q 244 3 the the DT cord-000238-om92cx5q 244 4 above above JJ cord-000238-om92cx5q 244 5 studies study NNS cord-000238-om92cx5q 244 6 suggest suggest VBP cord-000238-om92cx5q 244 7 ways way NNS cord-000238-om92cx5q 244 8 that that WDT cord-000238-om92cx5q 244 9 robustness robustness NN cord-000238-om92cx5q 244 10 might may MD cord-000238-om92cx5q 244 11 play play VB cord-000238-om92cx5q 244 12 a a DT cord-000238-om92cx5q 244 13 role role NN cord-000238-om92cx5q 244 14 in in IN cord-000238-om92cx5q 244 15 disease disease NN cord-000238-om92cx5q 244 16 pathogenesis pathogenesis NN cord-000238-om92cx5q 244 17 and and CC cord-000238-om92cx5q 244 18 treatment treatment NN cord-000238-om92cx5q 244 19 efficacy efficacy NN cord-000238-om92cx5q 244 20 , , , cord-000238-om92cx5q 244 21 and and CC cord-000238-om92cx5q 244 22 how how WRB cord-000238-om92cx5q 244 23 robustness robustness NN cord-000238-om92cx5q 244 24 might may MD cord-000238-om92cx5q 244 25 be be VB cord-000238-om92cx5q 244 26 linked link VBN cord-000238-om92cx5q 244 27 to to IN cord-000238-om92cx5q 244 28 emergence emergence NN cord-000238-om92cx5q 244 29 of of IN cord-000238-om92cx5q 244 30 future future JJ cord-000238-om92cx5q 244 31 viral viral JJ cord-000238-om92cx5q 244 32 diseases disease NNS cord-000238-om92cx5q 244 33 in in IN cord-000238-om92cx5q 244 34 humans human NNS cord-000238-om92cx5q 244 35 . . . cord-000238-om92cx5q 245 1 However however RB cord-000238-om92cx5q 245 2 , , , cord-000238-om92cx5q 245 3 contemporary contemporary JJ cord-000238-om92cx5q 245 4 examples example NNS cord-000238-om92cx5q 245 5 already already RB cord-000238-om92cx5q 245 6 indicate indicate VBP cord-000238-om92cx5q 245 7 that that IN cord-000238-om92cx5q 245 8 robustness robustness NN cord-000238-om92cx5q 245 9 theory theory NN cord-000238-om92cx5q 245 10 is be VBZ cord-000238-om92cx5q 245 11 helpful helpful JJ cord-000238-om92cx5q 245 12 in in IN cord-000238-om92cx5q 245 13 elucidating elucidate VBG cord-000238-om92cx5q 245 14 evolutionary evolutionary JJ cord-000238-om92cx5q 245 15 dynamics dynamic NNS cord-000238-om92cx5q 245 16 of of IN cord-000238-om92cx5q 245 17 important important JJ cord-000238-om92cx5q 245 18 RNA RNA NNP cord-000238-om92cx5q 245 19 virus virus NN cord-000238-om92cx5q 245 20 diseases disease NNS cord-000238-om92cx5q 245 21 . . . cord-000238-om92cx5q 246 1 One one CD cord-000238-om92cx5q 246 2 example example NN cord-000238-om92cx5q 246 3 is be VBZ cord-000238-om92cx5q 246 4 the the DT cord-000238-om92cx5q 246 5 occurrence occurrence NN cord-000238-om92cx5q 246 6 of of IN cord-000238-om92cx5q 246 7 flu flu NN cord-000238-om92cx5q 246 8 pandemics pandemic NNS cord-000238-om92cx5q 246 9 in in IN cord-000238-om92cx5q 246 10 humans human NNS cord-000238-om92cx5q 246 11 , , , cord-000238-om92cx5q 246 12 a a DT cord-000238-om92cx5q 246 13 substantial substantial JJ cord-000238-om92cx5q 246 14 public public JJ cord-000238-om92cx5q 246 15 health health NN cord-000238-om92cx5q 246 16 concern concern NN cord-000238-om92cx5q 246 17 in in IN cord-000238-om92cx5q 246 18 the the DT cord-000238-om92cx5q 246 19 last last JJ cord-000238-om92cx5q 246 20 century century NN cord-000238-om92cx5q 246 21 . . . cord-000238-om92cx5q 247 1 Recent recent JJ cord-000238-om92cx5q 247 2 studies study NNS cord-000238-om92cx5q 247 3 suggest suggest VBP cord-000238-om92cx5q 247 4 that that IN cord-000238-om92cx5q 247 5 strains strain NNS cord-000238-om92cx5q 247 6 of of IN cord-000238-om92cx5q 247 7 influenza influenza NN cord-000238-om92cx5q 247 8 A a DT cord-000238-om92cx5q 247 9 virus virus NN cord-000238-om92cx5q 247 10 can can MD cord-000238-om92cx5q 247 11 spread spread VB cord-000238-om92cx5q 247 12 through through IN cord-000238-om92cx5q 247 13 human human JJ cord-000238-om92cx5q 247 14 populations population NNS cord-000238-om92cx5q 247 15 because because IN cord-000238-om92cx5q 247 16 they -PRON- PRP cord-000238-om92cx5q 247 17 form form VBP cord-000238-om92cx5q 247 18 a a DT cord-000238-om92cx5q 247 19 neutral neutral JJ cord-000238-om92cx5q 247 20 network network NN cord-000238-om92cx5q 247 21 of of IN cord-000238-om92cx5q 247 22 virus virus NN cord-000238-om92cx5q 247 23 genotypes genotype NNS cord-000238-om92cx5q 247 24 that that WDT cord-000238-om92cx5q 247 25 share share VBP cord-000238-om92cx5q 247 26 the the DT cord-000238-om92cx5q 247 27 same same JJ cord-000238-om92cx5q 247 28 phenotype phenotype NN cord-000238-om92cx5q 247 29 . . . cord-000238-om92cx5q 248 1 55 55 CD cord-000238-om92cx5q 248 2 , , , cord-000238-om92cx5q 248 3 56 56 CD cord-000238-om92cx5q 249 1 Essentially essentially RB cord-000238-om92cx5q 249 2 , , , cord-000238-om92cx5q 249 3 this this DT cord-000238-om92cx5q 249 4 network network NN cord-000238-om92cx5q 249 5 allows allow VBZ cord-000238-om92cx5q 249 6 the the DT cord-000238-om92cx5q 249 7 virus virus NN cord-000238-om92cx5q 249 8 to to TO cord-000238-om92cx5q 249 9 drift drift VB cord-000238-om92cx5q 249 10 through through IN cord-000238-om92cx5q 249 11 neutral neutral JJ cord-000238-om92cx5q 249 12 space space NN cord-000238-om92cx5q 249 13 connected connect VBN cord-000238-om92cx5q 249 14 via via IN cord-000238-om92cx5q 249 15 mutation mutation NN cord-000238-om92cx5q 249 16 , , , cord-000238-om92cx5q 249 17 until until IN cord-000238-om92cx5q 249 18 a a DT cord-000238-om92cx5q 249 19 single single JJ cord-000238-om92cx5q 249 20 mutation mutation NN cord-000238-om92cx5q 249 21 shifts shift NNS cord-000238-om92cx5q 249 22 to to IN cord-000238-om92cx5q 249 23 a a DT cord-000238-om92cx5q 249 24 different different JJ cord-000238-om92cx5q 249 25 serotype serotype NN cord-000238-om92cx5q 249 26 ͑Fig ͑fig NN cord-000238-om92cx5q 249 27 . . . cord-000238-om92cx5q 250 1 3͒. 3͒. CD cord-000238-om92cx5q 251 1 This this DT cord-000238-om92cx5q 251 2 shift shift NN cord-000238-om92cx5q 251 3 then then RB cord-000238-om92cx5q 251 4 facilitates facilitate VBZ cord-000238-om92cx5q 251 5 escape escape NN cord-000238-om92cx5q 251 6 from from IN cord-000238-om92cx5q 251 7 host host NN cord-000238-om92cx5q 251 8 immunity immunity NN cord-000238-om92cx5q 251 9 , , , cord-000238-om92cx5q 251 10 and and CC cord-000238-om92cx5q 251 11 fosters foster VBZ cord-000238-om92cx5q 251 12 the the DT cord-000238-om92cx5q 251 13 ability ability NN cord-000238-om92cx5q 251 14 for for IN cord-000238-om92cx5q 251 15 the the DT cord-000238-om92cx5q 251 16 virus virus NN cord-000238-om92cx5q 251 17 to to TO cord-000238-om92cx5q 251 18 infect infect VB cord-000238-om92cx5q 251 19 a a DT cord-000238-om92cx5q 251 20 new new JJ cord-000238-om92cx5q 251 21 class class NN cord-000238-om92cx5q 251 22 of of IN cord-000238-om92cx5q 251 23 susceptible susceptible JJ cord-000238-om92cx5q 251 24 hosts host NNS cord-000238-om92cx5q 251 25 . . . cord-000238-om92cx5q 252 1 Although although IN cord-000238-om92cx5q 252 2 these these DT cord-000238-om92cx5q 252 3 studies study NNS cord-000238-om92cx5q 252 4 make make VBP cord-000238-om92cx5q 252 5 no no DT cord-000238-om92cx5q 252 6 explicit explicit JJ cord-000238-om92cx5q 252 7 mention mention NN cord-000238-om92cx5q 252 8 of of IN cord-000238-om92cx5q 252 9 the the DT cord-000238-om92cx5q 252 10 role role NN cord-000238-om92cx5q 252 11 of of IN cord-000238-om92cx5q 252 12 such such JJ cord-000238-om92cx5q 252 13 genetic genetic JJ cord-000238-om92cx5q 252 14 robustness robustness NN cord-000238-om92cx5q 252 15 in in IN cord-000238-om92cx5q 252 16 flu flu NN cord-000238-om92cx5q 252 17 epidemics epidemic NNS cord-000238-om92cx5q 252 18 , , , cord-000238-om92cx5q 252 19 55,56 55,56 CD cord-000238-om92cx5q 252 20 the the DT cord-000238-om92cx5q 252 21 available available JJ cord-000238-om92cx5q 252 22 evidence evidence NN cord-000238-om92cx5q 252 23 strongly strongly RB cord-000238-om92cx5q 252 24 suggests suggest VBZ cord-000238-om92cx5q 252 25 that that IN cord-000238-om92cx5q 252 26 the the DT cord-000238-om92cx5q 252 27 phenomenon phenomenon NN cord-000238-om92cx5q 252 28 is be VBZ cord-000238-om92cx5q 252 29 relevant relevant JJ cord-000238-om92cx5q 252 30 in in IN cord-000238-om92cx5q 252 31 this this DT cord-000238-om92cx5q 252 32 case case NN cord-000238-om92cx5q 252 33 of of IN cord-000238-om92cx5q 252 34 influenza influenza NN cord-000238-om92cx5q 252 35 strain strain NN cord-000238-om92cx5q 252 36 H3N2 H3N2 NNP cord-000238-om92cx5q 252 37 . . . cord-000238-om92cx5q 253 1 Genetic genetic JJ cord-000238-om92cx5q 253 2 robustness robustness NN cord-000238-om92cx5q 253 3 in in IN cord-000238-om92cx5q 253 4 the the DT cord-000238-om92cx5q 253 5 hemagglutinin hemagglutinin NN cord-000238-om92cx5q 254 1 ͑HA͒ ͑HA͒ , cord-000238-om92cx5q 254 2 gene gene NN cord-000238-om92cx5q 254 3 of of IN cord-000238-om92cx5q 254 4 strain strain NN cord-000238-om92cx5q 254 5 H3N2 H3N2 NNP cord-000238-om92cx5q 254 6 allows allow VBZ cord-000238-om92cx5q 254 7 the the DT cord-000238-om92cx5q 254 8 virus virus NN cord-000238-om92cx5q 254 9 to to TO cord-000238-om92cx5q 254 10 drift drift VB cord-000238-om92cx5q 254 11 through through IN cord-000238-om92cx5q 254 12 neutral neutral JJ cord-000238-om92cx5q 254 13 genotypic genotypic JJ cord-000238-om92cx5q 254 14 space space NN cord-000238-om92cx5q 254 15 without without IN cord-000238-om92cx5q 254 16 a a DT cord-000238-om92cx5q 254 17 change change NN cord-000238-om92cx5q 254 18 in in IN cord-000238-om92cx5q 254 19 phenotype phenotype NN cord-000238-om92cx5q 254 20 until until IN cord-000238-om92cx5q 254 21 it -PRON- PRP cord-000238-om92cx5q 254 22 reaches reach VBZ cord-000238-om92cx5q 254 23 a a DT cord-000238-om92cx5q 254 24 rapid rapid JJ cord-000238-om92cx5q 254 25 saltational saltational JJ cord-000238-om92cx5q 254 26 phenotypic phenotypic NN cord-000238-om92cx5q 254 27 shift shift NN cord-000238-om92cx5q 254 28 that that WDT cord-000238-om92cx5q 254 29 permits permit VBZ cord-000238-om92cx5q 254 30 the the DT cord-000238-om92cx5q 254 31 ability ability NN cord-000238-om92cx5q 254 32 for for IN cord-000238-om92cx5q 254 33 strains strain NNS cord-000238-om92cx5q 254 34 derived derive VBN cord-000238-om92cx5q 254 35 from from IN cord-000238-om92cx5q 254 36 this this DT cord-000238-om92cx5q 254 37 virus virus NN cord-000238-om92cx5q 254 38 to to TO cord-000238-om92cx5q 254 39 reemerge reemerge VB cord-000238-om92cx5q 254 40 in in IN cord-000238-om92cx5q 254 41 humans human NNS cord-000238-om92cx5q 254 42 . . . cord-000238-om92cx5q 255 1 This this DT cord-000238-om92cx5q 255 2 model model NN cord-000238-om92cx5q 255 3 is be VBZ cord-000238-om92cx5q 255 4 compatible compatible JJ cord-000238-om92cx5q 255 5 with with IN cord-000238-om92cx5q 255 6 other other JJ cord-000238-om92cx5q 255 7 robustness robustness NN cord-000238-om92cx5q 255 8 - - HYPH cord-000238-om92cx5q 255 9 evolvability evolvability NN cord-000238-om92cx5q 255 10 links link NNS cord-000238-om92cx5q 255 11 outlined outline VBN cord-000238-om92cx5q 255 12 in in IN cord-000238-om92cx5q 255 13 the the DT cord-000238-om92cx5q 255 14 literature literature NN cord-000238-om92cx5q 255 15 . . . cord-000238-om92cx5q 256 1 57 57 CD cord-000238-om92cx5q 256 2 , , , cord-000238-om92cx5q 256 3 7 7 CD cord-000238-om92cx5q 256 4 , , , cord-000238-om92cx5q 256 5 8 8 CD cord-000238-om92cx5q 256 6 Judging judge VBG cord-000238-om92cx5q 256 7 from from IN cord-000238-om92cx5q 256 8 phylogenetic phylogenetic JJ cord-000238-om92cx5q 256 9 and and CC cord-000238-om92cx5q 256 10 molecular molecular JJ cord-000238-om92cx5q 256 11 evolution evolution NN cord-000238-om92cx5q 256 12 analyses analysis NNS cord-000238-om92cx5q 256 13 of of IN cord-000238-om92cx5q 256 14 clinical clinical JJ cord-000238-om92cx5q 256 15 isolates isolate NNS cord-000238-om92cx5q 256 16 , , , cord-000238-om92cx5q 256 17 it -PRON- PRP cord-000238-om92cx5q 256 18 appears appear VBZ cord-000238-om92cx5q 256 19 that that IN cord-000238-om92cx5q 256 20 the the DT cord-000238-om92cx5q 256 21 HA HA NNP cord-000238-om92cx5q 256 22 gene gene NN cord-000238-om92cx5q 256 23 of of IN cord-000238-om92cx5q 256 24 influenza influenza NN cord-000238-om92cx5q 256 25 A a DT cord-000238-om92cx5q 256 26 virus virus NN cord-000238-om92cx5q 256 27 appears appear VBZ cord-000238-om92cx5q 256 28 to to TO cord-000238-om92cx5q 256 29 be be VB cord-000238-om92cx5q 256 30 under under IN cord-000238-om92cx5q 256 31 strong strong JJ cord-000238-om92cx5q 256 32 selection selection NN cord-000238-om92cx5q 256 33 by by IN cord-000238-om92cx5q 256 34 the the DT cord-000238-om92cx5q 256 35 human human JJ cord-000238-om92cx5q 256 36 immune immune NN cord-000238-om92cx5q 256 37 system system NN cord-000238-om92cx5q 256 38 , , , cord-000238-om92cx5q 256 39 58 58 CD cord-000238-om92cx5q 256 40 and and CC cord-000238-om92cx5q 256 41 perhaps perhaps RB cord-000238-om92cx5q 256 42 this this DT cord-000238-om92cx5q 256 43 has have VBZ cord-000238-om92cx5q 256 44 been be VBN cord-000238-om92cx5q 256 45 true true JJ cord-000238-om92cx5q 256 46 for for IN cord-000238-om92cx5q 256 47 much much JJ cord-000238-om92cx5q 256 48 of of IN cord-000238-om92cx5q 256 49 the the DT cord-000238-om92cx5q 256 50 evolutionary evolutionary JJ cord-000238-om92cx5q 256 51 history history NN cord-000238-om92cx5q 256 52 of of IN cord-000238-om92cx5q 256 53 flu flu NN cord-000238-om92cx5q 256 54 disease disease NN cord-000238-om92cx5q 256 55 in in IN cord-000238-om92cx5q 256 56 humans human NNS cord-000238-om92cx5q 256 57 . . . cord-000238-om92cx5q 257 1 The the DT cord-000238-om92cx5q 257 2 genetic genetic JJ cord-000238-om92cx5q 257 3 robustness robustness NN cord-000238-om92cx5q 257 4 of of IN cord-000238-om92cx5q 257 5 influenza influenza NN cord-000238-om92cx5q 257 6 viruses virus NNS cord-000238-om92cx5q 257 7 and and CC cord-000238-om92cx5q 257 8 the the DT cord-000238-om92cx5q 257 9 accompanying accompanying JJ cord-000238-om92cx5q 257 10 structure structure NN cord-000238-om92cx5q 257 11 of of IN cord-000238-om92cx5q 257 12 neutral neutral JJ cord-000238-om92cx5q 257 13 genetic genetic JJ cord-000238-om92cx5q 257 14 networks network NNS cord-000238-om92cx5q 257 15 probably probably RB cord-000238-om92cx5q 257 16 arose arise VBD cord-000238-om92cx5q 257 17 to to TO cord-000238-om92cx5q 257 18 foster foster VB cord-000238-om92cx5q 257 19 the the DT cord-000238-om92cx5q 257 20 epidemiological epidemiological JJ cord-000238-om92cx5q 257 21 spread spread NN cord-000238-om92cx5q 257 22 of of IN cord-000238-om92cx5q 257 23 the the DT cord-000238-om92cx5q 257 24 virus virus NN cord-000238-om92cx5q 257 25 in in IN cord-000238-om92cx5q 257 26 humans human NNS cord-000238-om92cx5q 257 27 and/or and/or CC cord-000238-om92cx5q 257 28 other other JJ cord-000238-om92cx5q 257 29 animal animal NN cord-000238-om92cx5q 257 30 hosts host NNS cord-000238-om92cx5q 257 31 . . . cord-000238-om92cx5q 258 1 The the DT cord-000238-om92cx5q 258 2 size size NN cord-000238-om92cx5q 258 3 of of IN cord-000238-om92cx5q 258 4 these these DT cord-000238-om92cx5q 258 5 neutral neutral JJ cord-000238-om92cx5q 258 6 networks network NNS cord-000238-om92cx5q 258 7 is be VBZ cord-000238-om92cx5q 258 8 of of IN cord-000238-om92cx5q 258 9 consequence consequence NN cord-000238-om92cx5q 258 10 in in IN cord-000238-om92cx5q 258 11 the the DT cord-000238-om92cx5q 258 12 evolution evolution NN cord-000238-om92cx5q 258 13 of of IN cord-000238-om92cx5q 258 14 influenza influenza NN cord-000238-om92cx5q 258 15 , , , cord-000238-om92cx5q 258 16 as as IN cord-000238-om92cx5q 258 17 suggested suggest VBN cord-000238-om92cx5q 258 18 by by IN cord-000238-om92cx5q 258 19 modern modern JJ cord-000238-om92cx5q 258 20 robustness robustness NN cord-000238-om92cx5q 258 21 theory theory NN cord-000238-om92cx5q 258 22 . . . cord-000238-om92cx5q 259 1 8 8 CD cord-000238-om92cx5q 260 1 A a DT cord-000238-om92cx5q 260 2 HA HA NNP cord-000238-om92cx5q 260 3 gene gene NN cord-000238-om92cx5q 260 4 with with IN cord-000238-om92cx5q 260 5 relatively relatively RB cord-000238-om92cx5q 260 6 low low JJ cord-000238-om92cx5q 260 7 robustness robustness NN cord-000238-om92cx5q 260 8 would would MD cord-000238-om92cx5q 260 9 feature feature VB cord-000238-om92cx5q 260 10 a a DT cord-000238-om92cx5q 260 11 small small JJ cord-000238-om92cx5q 260 12 neutral neutral JJ cord-000238-om92cx5q 260 13 network network NN cord-000238-om92cx5q 260 14 ; ; : cord-000238-om92cx5q 260 15 this this DT cord-000238-om92cx5q 260 16 characteristic characteristic NN cord-000238-om92cx5q 260 17 might may MD cord-000238-om92cx5q 260 18 cause cause VB cord-000238-om92cx5q 260 19 the the DT cord-000238-om92cx5q 260 20 virus virus NN cord-000238-om92cx5q 260 21 to to TO cord-000238-om92cx5q 260 22 molecularly molecularly RB cord-000238-om92cx5q 260 23 evolve evolve VB cord-000238-om92cx5q 260 24 rather rather RB cord-000238-om92cx5q 260 25 quickly quickly RB cord-000238-om92cx5q 260 26 , , , cord-000238-om92cx5q 260 27 perhaps perhaps RB cord-000238-om92cx5q 260 28 outpacing outpace VBG cord-000238-om92cx5q 260 29 the the DT cord-000238-om92cx5q 260 30 availability availability NN cord-000238-om92cx5q 260 31 of of IN cord-000238-om92cx5q 260 32 susceptible susceptible JJ cord-000238-om92cx5q 260 33 individuals individual NNS cord-000238-om92cx5q 260 34 in in IN cord-000238-om92cx5q 260 35 a a DT cord-000238-om92cx5q 260 36 host host NN cord-000238-om92cx5q 260 37 population population NN cord-000238-om92cx5q 260 38 , , , cord-000238-om92cx5q 260 39 slowing slow VBG cord-000238-om92cx5q 260 40 or or CC cord-000238-om92cx5q 260 41 halting halting JJ cord-000238-om92cx5q 260 42 spread spread NN cord-000238-om92cx5q 260 43 of of IN cord-000238-om92cx5q 260 44 the the DT cord-000238-om92cx5q 260 45 virus virus NN cord-000238-om92cx5q 260 46 . . . cord-000238-om92cx5q 261 1 But but CC cord-000238-om92cx5q 261 2 a a DT cord-000238-om92cx5q 261 3 relatively relatively RB cord-000238-om92cx5q 261 4 larger large JJR cord-000238-om92cx5q 261 5 neutral neutral JJ cord-000238-om92cx5q 261 6 network network NN cord-000238-om92cx5q 261 7 would would MD cord-000238-om92cx5q 261 8 afford afford VB cord-000238-om92cx5q 261 9 greater great JJR cord-000238-om92cx5q 261 10 robustness robustness NN cord-000238-om92cx5q 261 11 of of IN cord-000238-om92cx5q 261 12 HA HA NNP cord-000238-om92cx5q 261 13 genes gene NNS cord-000238-om92cx5q 261 14 in in IN cord-000238-om92cx5q 261 15 influenza influenza NN cord-000238-om92cx5q 261 16 , , , cord-000238-om92cx5q 261 17 affording afford VBG cord-000238-om92cx5q 261 18 long long JJ cord-000238-om92cx5q 261 19 - - HYPH cord-000238-om92cx5q 261 20 term term NN cord-000238-om92cx5q 261 21 persistence persistence NN cord-000238-om92cx5q 261 22 of of IN cord-000238-om92cx5q 261 23 the the DT cord-000238-om92cx5q 261 24 virus virus NN cord-000238-om92cx5q 261 25 as as IN cord-000238-om92cx5q 261 26 it -PRON- PRP cord-000238-om92cx5q 261 27 drifts drift VBZ cord-000238-om92cx5q 261 28 neutrally neutrally RB cord-000238-om92cx5q 261 29 through through IN cord-000238-om92cx5q 261 30 sequence sequence NN cord-000238-om92cx5q 261 31 space space NN cord-000238-om92cx5q 261 32 before before IN cord-000238-om92cx5q 261 33 fortuitously fortuitously RB cord-000238-om92cx5q 261 34 achieving achieve VBG cord-000238-om92cx5q 261 35 a a DT cord-000238-om92cx5q 261 36 genotype genotype NN cord-000238-om92cx5q 261 37 with with IN cord-000238-om92cx5q 261 38 a a DT cord-000238-om92cx5q 261 39 beneficial beneficial JJ cord-000238-om92cx5q 261 40 novel novel NN cord-000238-om92cx5q 261 41 surface surface NN cord-000238-om92cx5q 261 42 antigen antigen NN cord-000238-om92cx5q 261 43 that that WDT cord-000238-om92cx5q 261 44 promotes promote VBZ cord-000238-om92cx5q 261 45 reemergence reemergence NN cord-000238-om92cx5q 261 46 . . . cord-000238-om92cx5q 262 1 Genetic genetic JJ cord-000238-om92cx5q 262 2 robustness robustness NN cord-000238-om92cx5q 262 3 in in IN cord-000238-om92cx5q 262 4 the the DT cord-000238-om92cx5q 262 5 genetic genetic JJ cord-000238-om92cx5q 262 6 networks network NNS cord-000238-om92cx5q 262 7 of of IN cord-000238-om92cx5q 262 8 influenza influenza NN cord-000238-om92cx5q 262 9 A a DT cord-000238-om92cx5q 262 10 virus virus NN cord-000238-om92cx5q 262 11 might may MD cord-000238-om92cx5q 262 12 have have VB cord-000238-om92cx5q 262 13 an an DT cord-000238-om92cx5q 262 14 environmental environmental JJ cord-000238-om92cx5q 262 15 robustness robustness NN cord-000238-om92cx5q 262 16 correlate correlate VBP cord-000238-om92cx5q 262 17 . . . cord-000238-om92cx5q 263 1 Influenza Influenza NNP cord-000238-om92cx5q 263 2 A a DT cord-000238-om92cx5q 263 3 virus virus NN cord-000238-om92cx5q 263 4 is be VBZ cord-000238-om92cx5q 263 5 notorious notorious JJ cord-000238-om92cx5q 263 6 for for IN cord-000238-om92cx5q 263 7 its -PRON- PRP$ cord-000238-om92cx5q 263 8 characteristically characteristically RB cord-000238-om92cx5q 263 9 broad broad JJ cord-000238-om92cx5q 263 10 host host NN cord-000238-om92cx5q 263 11 range range NN cord-000238-om92cx5q 263 12 , , , cord-000238-om92cx5q 263 13 including include VBG cord-000238-om92cx5q 263 14 various various JJ cord-000238-om92cx5q 263 15 bird bird NN cord-000238-om92cx5q 263 16 species specie NNS cord-000238-om92cx5q 263 17 and and CC cord-000238-om92cx5q 263 18 mammals mammal NNS cord-000238-om92cx5q 263 19 such such JJ cord-000238-om92cx5q 263 20 as as IN cord-000238-om92cx5q 263 21 domesticated domesticate VBN cord-000238-om92cx5q 263 22 pigs pig NNS cord-000238-om92cx5q 263 23 whose whose WP$ cord-000238-om92cx5q 263 24 proximity proximity NN cord-000238-om92cx5q 263 25 to to IN cord-000238-om92cx5q 263 26 humans human NNS cord-000238-om92cx5q 263 27 may may MD cord-000238-om92cx5q 263 28 spur spur VB cord-000238-om92cx5q 263 29 pandemics pandemic NNS cord-000238-om92cx5q 263 30 . . . cord-000238-om92cx5q 264 1 [ [ -LRB- cord-000238-om92cx5q 264 2 59 59 CD cord-000238-om92cx5q 264 3 ] ] -RRB- cord-000238-om92cx5q 264 4 [ [ -LRB- cord-000238-om92cx5q 264 5 60 60 CD cord-000238-om92cx5q 264 6 ] ] -RRB- cord-000238-om92cx5q 265 1 [ [ -LRB- cord-000238-om92cx5q 265 2 61 61 CD cord-000238-om92cx5q 265 3 ] ] -RRB- cord-000238-om92cx5q 266 1 As as IN cord-000238-om92cx5q 266 2 noted note VBN cord-000238-om92cx5q 266 3 earlier early RBR cord-000238-om92cx5q 266 4 , , , cord-000238-om92cx5q 266 5 relatively relatively RB cord-000238-om92cx5q 266 6 broad broad JJ cord-000238-om92cx5q 266 7 host host NN cord-000238-om92cx5q 266 8 range range NN cord-000238-om92cx5q 266 9 of of IN cord-000238-om92cx5q 266 10 a a DT cord-000238-om92cx5q 266 11 pathogen pathogen NN cord-000238-om92cx5q 266 12 may may MD cord-000238-om92cx5q 266 13 be be VB cord-000238-om92cx5q 266 14 defined define VBN cord-000238-om92cx5q 266 15 as as IN cord-000238-om92cx5q 266 16 environmental environmental JJ cord-000238-om92cx5q 266 17 robustness robustness NN cord-000238-om92cx5q 266 18 . . . cord-000238-om92cx5q 267 1 The the DT cord-000238-om92cx5q 267 2 ability ability NN cord-000238-om92cx5q 267 3 for for IN cord-000238-om92cx5q 267 4 influenza influenza NN cord-000238-om92cx5q 267 5 A a DT cord-000238-om92cx5q 267 6 viruses virus NNS cord-000238-om92cx5q 267 7 to to TO cord-000238-om92cx5q 267 8 traverse traverse VB cord-000238-om92cx5q 267 9 the the DT cord-000238-om92cx5q 267 10 aforementioned aforementioned JJ cord-000238-om92cx5q 267 11 neutral neutral JJ cord-000238-om92cx5q 267 12 network network NN cord-000238-om92cx5q 267 13 of of IN cord-000238-om92cx5q 267 14 genetic genetic JJ cord-000238-om92cx5q 267 15 robustness robustness NN cord-000238-om92cx5q 267 16 may may MD cord-000238-om92cx5q 267 17 have have VB cord-000238-om92cx5q 267 18 an an DT cord-000238-om92cx5q 267 19 important important JJ cord-000238-om92cx5q 267 20 environmental environmental JJ cord-000238-om92cx5q 267 21 robustness robustness NN cord-000238-om92cx5q 267 22 component component NN cord-000238-om92cx5q 267 23 . . . cord-000238-om92cx5q 268 1 The the DT cord-000238-om92cx5q 268 2 virus virus NN cord-000238-om92cx5q 268 3 may may MD cord-000238-om92cx5q 268 4 be be VB cord-000238-om92cx5q 268 5 able able JJ cord-000238-om92cx5q 268 6 to to TO cord-000238-om92cx5q 268 7 easily easily RB cord-000238-om92cx5q 268 8 create create VB cord-000238-om92cx5q 268 9 a a DT cord-000238-om92cx5q 268 10 robust robust JJ cord-000238-om92cx5q 268 11 neutral neutral JJ cord-000238-om92cx5q 268 12 network network NN cord-000238-om92cx5q 268 13 of of IN cord-000238-om92cx5q 268 14 genotypes genotype NNS cord-000238-om92cx5q 268 15 associated associate VBN cord-000238-om92cx5q 268 16 with with IN cord-000238-om92cx5q 268 17 attachment attachment NN cord-000238-om92cx5q 268 18 / / SYM cord-000238-om92cx5q 268 19 entry entry NN cord-000238-om92cx5q 268 20 of of IN cord-000238-om92cx5q 268 21 various various JJ cord-000238-om92cx5q 268 22 host host NN cord-000238-om92cx5q 268 23 cells cell NNS cord-000238-om92cx5q 268 24 due due JJ cord-000238-om92cx5q 268 25 to to IN cord-000238-om92cx5q 268 26 intrinsic intrinsic JJ cord-000238-om92cx5q 268 27 environmental environmental JJ cord-000238-om92cx5q 268 28 robustness robustness NN cord-000238-om92cx5q 268 29 that that WDT cord-000238-om92cx5q 268 30 evolved evolve VBD cord-000238-om92cx5q 268 31 via via IN cord-000238-om92cx5q 268 32 selection selection NN cord-000238-om92cx5q 268 33 to to TO cord-000238-om92cx5q 268 34 infect infect VB cord-000238-om92cx5q 268 35 a a DT cord-000238-om92cx5q 268 36 variety variety NN cord-000238-om92cx5q 268 37 of of IN cord-000238-om92cx5q 268 38 host host NN cord-000238-om92cx5q 268 39 environments environment NNS cord-000238-om92cx5q 268 40 . . . cord-000238-om92cx5q 269 1 In in IN cord-000238-om92cx5q 269 2 influenza influenza NN cord-000238-om92cx5q 269 3 A a DT cord-000238-om92cx5q 269 4 virus virus NN cord-000238-om92cx5q 269 5 , , , cord-000238-om92cx5q 269 6 whether whether IN cord-000238-om92cx5q 269 7 environmental environmental JJ cord-000238-om92cx5q 269 8 robustness robustness NN cord-000238-om92cx5q 269 9 preceded precede VBD cord-000238-om92cx5q 269 10 genetic genetic JJ cord-000238-om92cx5q 269 11 robustness robustness NN cord-000238-om92cx5q 269 12 , , , cord-000238-om92cx5q 269 13 or or CC cord-000238-om92cx5q 269 14 vice vice NN cord-000238-om92cx5q 269 15 versa versa RB cord-000238-om92cx5q 269 16 , , , cord-000238-om92cx5q 269 17 is be VBZ cord-000238-om92cx5q 269 18 difficult difficult JJ cord-000238-om92cx5q 269 19 to to TO cord-000238-om92cx5q 269 20 know know VB cord-000238-om92cx5q 269 21 . . . cord-000238-om92cx5q 270 1 But but CC cord-000238-om92cx5q 270 2 environmental environmental JJ cord-000238-om92cx5q 270 3 robustness robustness NN cord-000238-om92cx5q 270 4 of of IN cord-000238-om92cx5q 270 5 viruses virus NNS cord-000238-om92cx5q 270 6 such such JJ cord-000238-om92cx5q 270 7 as as IN cord-000238-om92cx5q 270 8 influenza influenza NN cord-000238-om92cx5q 270 9 A a DT cord-000238-om92cx5q 270 10 virus virus NN cord-000238-om92cx5q 270 11 undoubtedly undoubtedly RB cord-000238-om92cx5q 270 12 fosters foster VBZ cord-000238-om92cx5q 270 13 the the DT cord-000238-om92cx5q 270 14 ability ability NN cord-000238-om92cx5q 270 15 to to TO cord-000238-om92cx5q 270 16 reside reside VB cord-000238-om92cx5q 270 17 in in IN cord-000238-om92cx5q 270 18 various various JJ cord-000238-om92cx5q 270 19 host host NN cord-000238-om92cx5q 270 20 species specie NNS cord-000238-om92cx5q 270 21 that that WDT cord-000238-om92cx5q 270 22 may may MD cord-000238-om92cx5q 270 23 serve serve VB cord-000238-om92cx5q 270 24 as as IN cord-000238-om92cx5q 270 25 reservoirs reservoir NNS cord-000238-om92cx5q 270 26 that that WDT cord-000238-om92cx5q 270 27 allow allow VBP cord-000238-om92cx5q 270 28 occasional occasional JJ cord-000238-om92cx5q 270 29 spillover spillover NN cord-000238-om92cx5q 270 30 into into IN cord-000238-om92cx5q 270 31 a a DT cord-000238-om92cx5q 270 32 species species NN cord-000238-om92cx5q 270 33 of of IN cord-000238-om92cx5q 270 34 interest interest NN cord-000238-om92cx5q 270 35 such such JJ cord-000238-om92cx5q 270 36 as as IN cord-000238-om92cx5q 270 37 humans human NNS cord-000238-om92cx5q 270 38 . . . cord-000238-om92cx5q 271 1 52 52 CD cord-000238-om92cx5q 271 2 Robustness robustness NN cord-000238-om92cx5q 271 3 may may MD cord-000238-om92cx5q 271 4 also also RB cord-000238-om92cx5q 271 5 be be VB cord-000238-om92cx5q 271 6 relevant relevant JJ cord-000238-om92cx5q 271 7 in in IN cord-000238-om92cx5q 271 8 explaining explain VBG cord-000238-om92cx5q 271 9 aspects aspect NNS cord-000238-om92cx5q 271 10 of of IN cord-000238-om92cx5q 271 11 the the DT cord-000238-om92cx5q 271 12 current current JJ cord-000238-om92cx5q 271 13 AIDS AIDS NNP cord-000238-om92cx5q 271 14 pandemic pandemic NN cord-000238-om92cx5q 271 15 . . . cord-000238-om92cx5q 272 1 A a DT cord-000238-om92cx5q 272 2 global global JJ cord-000238-om92cx5q 272 3 increase increase NN cord-000238-om92cx5q 272 4 in in IN cord-000238-om92cx5q 272 5 robustness robustness NN cord-000238-om92cx5q 272 6 has have VBZ cord-000238-om92cx5q 272 7 been be VBN cord-000238-om92cx5q 272 8 invoked invoke VBN cord-000238-om92cx5q 272 9 to to TO cord-000238-om92cx5q 272 10 explain explain VB cord-000238-om92cx5q 272 11 an an DT cord-000238-om92cx5q 272 12 apparent apparent JJ cord-000238-om92cx5q 272 13 global global JJ cord-000238-om92cx5q 272 14 decline decline NN cord-000238-om92cx5q 272 15 in in IN cord-000238-om92cx5q 272 16 the the DT cord-000238-om92cx5q 272 17 virulence virulence NN cord-000238-om92cx5q 272 18 of of IN cord-000238-om92cx5q 272 19 HIV-1 HIV-1 NNP cord-000238-om92cx5q 272 20 strains strain NNS cord-000238-om92cx5q 272 21 . . . cord-000238-om92cx5q 273 1 38 38 CD cord-000238-om92cx5q 274 1 Although although IN cord-000238-om92cx5q 274 2 it -PRON- PRP cord-000238-om92cx5q 274 3 was be VBD cord-000238-om92cx5q 274 4 not not RB cord-000238-om92cx5q 274 5 discussed discuss VBN cord-000238-om92cx5q 274 6 extensively extensively RB cord-000238-om92cx5q 274 7 , , , cord-000238-om92cx5q 274 8 the the DT cord-000238-om92cx5q 274 9 robustness robustness NN cord-000238-om92cx5q 274 10 concept concept NN cord-000238-om92cx5q 274 11 in in IN cord-000238-om92cx5q 274 12 this this DT cord-000238-om92cx5q 274 13 example example NN cord-000238-om92cx5q 274 14 seems seem VBZ cord-000238-om92cx5q 274 15 to to TO cord-000238-om92cx5q 274 16 be be VB cord-000238-om92cx5q 274 17 environmentally environmentally RB cord-000238-om92cx5q 274 18 , , , cord-000238-om92cx5q 274 19 not not RB cord-000238-om92cx5q 274 20 mutationally mutationally RB cord-000238-om92cx5q 274 21 , , , cord-000238-om92cx5q 274 22 determined determine VBN cord-000238-om92cx5q 274 23 . . . cord-000238-om92cx5q 275 1 The the DT cord-000238-om92cx5q 275 2 argument argument NN cord-000238-om92cx5q 275 3 is be VBZ cord-000238-om92cx5q 275 4 that that IN cord-000238-om92cx5q 275 5 a a DT cord-000238-om92cx5q 275 6 perceived perceive VBN cord-000238-om92cx5q 275 7 decline decline NN cord-000238-om92cx5q 275 8 in in IN cord-000238-om92cx5q 275 9 HIV-1 HIV-1 NNP cord-000238-om92cx5q 275 10 virulence virulence NN cord-000238-om92cx5q 275 11 might may MD cord-000238-om92cx5q 275 12 be be VB cord-000238-om92cx5q 275 13 due due JJ cord-000238-om92cx5q 275 14 to to IN cord-000238-om92cx5q 275 15 generally generally RB cord-000238-om92cx5q 275 16 evolved evolve VBN cord-000238-om92cx5q 275 17 increase increase VB cord-000238-om92cx5q 275 18 in in IN cord-000238-om92cx5q 275 19 environmental environmental JJ cord-000238-om92cx5q 275 20 robustness robustness NN cord-000238-om92cx5q 275 21 of of IN cord-000238-om92cx5q 275 22 the the DT cord-000238-om92cx5q 275 23 virus virus NN cord-000238-om92cx5q 275 24 , , , cord-000238-om92cx5q 275 25 owing owe VBG cord-000238-om92cx5q 275 26 to to IN cord-000238-om92cx5q 275 27 its -PRON- PRP$ cord-000238-om92cx5q 275 28 worldwide worldwide JJ cord-000238-om92cx5q 275 29 spread spread NN cord-000238-om92cx5q 275 30 . . . cord-000238-om92cx5q 276 1 The the DT cord-000238-om92cx5q 276 2 virus virus NN cord-000238-om92cx5q 276 3 has have VBZ cord-000238-om92cx5q 276 4 thus thus RB cord-000238-om92cx5q 276 5 encountered encounter VBN cord-000238-om92cx5q 276 6 variable variable JJ cord-000238-om92cx5q 276 7 subpopulations subpopulation NNS cord-000238-om92cx5q 276 8 of of IN cord-000238-om92cx5q 276 9 humans human NNS cord-000238-om92cx5q 276 10 and and CC cord-000238-om92cx5q 276 11 has have VBZ cord-000238-om92cx5q 276 12 undergone undergo VBN cord-000238-om92cx5q 276 13 selection selection NN cord-000238-om92cx5q 276 14 for for IN cord-000238-om92cx5q 276 15 environmental environmental JJ cord-000238-om92cx5q 276 16 robustness robustness NN cord-000238-om92cx5q 276 17 , , , cord-000238-om92cx5q 276 18 which which WDT cord-000238-om92cx5q 276 19 coincides coincide VBZ cord-000238-om92cx5q 276 20 with with IN cord-000238-om92cx5q 276 21 improved improved JJ cord-000238-om92cx5q 276 22 performance performance NN cord-000238-om92cx5q 276 23 across across IN cord-000238-om92cx5q 276 24 environments environment NNS cord-000238-om92cx5q 276 25 at at IN cord-000238-om92cx5q 276 26 the the DT cord-000238-om92cx5q 276 27 expense expense NN cord-000238-om92cx5q 276 28 of of IN cord-000238-om92cx5q 276 29 reduced reduce VBN cord-000238-om92cx5q 276 30 reproduction reproduction NN cord-000238-om92cx5q 277 1 ͑i.e ͑i.e NFP cord-000238-om92cx5q 277 2 . . . cord-000238-om92cx5q 278 1 , , , cord-000238-om92cx5q 278 2 virulence͒ virulence͒ VBG cord-000238-om92cx5q 278 3 on on IN cord-000238-om92cx5q 278 4 average average JJ cord-000238-om92cx5q 278 5 . . . cord-000238-om92cx5q 279 1 This this DT cord-000238-om92cx5q 279 2 explanation explanation NN cord-000238-om92cx5q 279 3 assumes assume VBZ cord-000238-om92cx5q 279 4 that that IN cord-000238-om92cx5q 279 5 the the DT cord-000238-om92cx5q 279 6 stated state VBN cord-000238-om92cx5q 279 7 tradeoff tradeoff NN cord-000238-om92cx5q 279 8 in in IN cord-000238-om92cx5q 279 9 viral viral JJ cord-000238-om92cx5q 279 10 traits trait NNS cord-000238-om92cx5q 279 11 is be VBZ cord-000238-om92cx5q 279 12 a a DT cord-000238-om92cx5q 279 13 generalized generalized JJ cord-000238-om92cx5q 279 14 phenomenon phenomenon NN cord-000238-om92cx5q 279 15 , , , cord-000238-om92cx5q 279 16 and and CC cord-000238-om92cx5q 279 17 that that IN cord-000238-om92cx5q 279 18 results result NNS cord-000238-om92cx5q 279 19 for for IN cord-000238-om92cx5q 279 20 increased increase VBN cord-000238-om92cx5q 279 21 genetic genetic JJ cord-000238-om92cx5q 279 22 robustness robustness NN cord-000238-om92cx5q 279 23 at at IN cord-000238-om92cx5q 279 24 the the DT cord-000238-om92cx5q 279 25 expense expense NN cord-000238-om92cx5q 279 26 of of IN cord-000238-om92cx5q 279 27 reduced reduced JJ cord-000238-om92cx5q 279 28 reproduction reproduction NN cord-000238-om92cx5q 279 29 9,13 9,13 CD cord-000238-om92cx5q 279 30 apply apply VBP cord-000238-om92cx5q 279 31 in in IN cord-000238-om92cx5q 279 32 the the DT cord-000238-om92cx5q 279 33 case case NN cord-000238-om92cx5q 279 34 of of IN cord-000238-om92cx5q 279 35 environmental environmental JJ cord-000238-om92cx5q 279 36 robustness robustness NN cord-000238-om92cx5q 279 37 as as RB cord-000238-om92cx5q 279 38 well well RB cord-000238-om92cx5q 279 39 . . . cord-000238-om92cx5q 280 1 Regardless regardless RB cord-000238-om92cx5q 280 2 of of IN cord-000238-om92cx5q 280 3 the the DT cord-000238-om92cx5q 280 4 disease disease NN cord-000238-om92cx5q 280 5 system system NN cord-000238-om92cx5q 280 6 , , , cord-000238-om92cx5q 280 7 pharmacology pharmacology NN cord-000238-om92cx5q 280 8 involves involve VBZ cord-000238-om92cx5q 280 9 the the DT cord-000238-om92cx5q 280 10 use use NN cord-000238-om92cx5q 280 11 of of IN cord-000238-om92cx5q 280 12 small small JJ cord-000238-om92cx5q 280 13 molecule molecule NN cord-000238-om92cx5q 280 14 inhibitors inhibitor NNS cord-000238-om92cx5q 280 15 of of IN cord-000238-om92cx5q 280 16 biomolecular biomolecular JJ cord-000238-om92cx5q 280 17 interactions interaction NNS cord-000238-om92cx5q 280 18 , , , cord-000238-om92cx5q 280 19 and and CC cord-000238-om92cx5q 280 20 we -PRON- PRP cord-000238-om92cx5q 280 21 believe believe VBP cord-000238-om92cx5q 280 22 that that IN cord-000238-om92cx5q 280 23 robustness robustness NN cord-000238-om92cx5q 280 24 may may MD cord-000238-om92cx5q 280 25 be be VB cord-000238-om92cx5q 280 26 a a DT cord-000238-om92cx5q 280 27 highly highly RB cord-000238-om92cx5q 280 28 relevant relevant JJ cord-000238-om92cx5q 280 29 concept concept NN cord-000238-om92cx5q 280 30 in in IN cord-000238-om92cx5q 280 31 the the DT cord-000238-om92cx5q 280 32 identification identification NN cord-000238-om92cx5q 280 33 of of IN cord-000238-om92cx5q 280 34 potential potential JJ cord-000238-om92cx5q 280 35 drug drug NN cord-000238-om92cx5q 280 36 targets target NNS cord-000238-om92cx5q 280 37 . . . cord-000238-om92cx5q 281 1 This this DT cord-000238-om92cx5q 281 2 logic logic NN cord-000238-om92cx5q 281 3 begins begin VBZ cord-000238-om92cx5q 281 4 with with IN cord-000238-om92cx5q 281 5 identifying identify VBG cord-000238-om92cx5q 281 6 in in IN cord-000238-om92cx5q 281 7 pathogen pathogen NN cord-000238-om92cx5q 281 8 systems system NNS cord-000238-om92cx5q 281 9 the the DT cord-000238-om92cx5q 281 10 modules module NNS cord-000238-om92cx5q 281 11 that that WDT cord-000238-om92cx5q 281 12 may may MD cord-000238-om92cx5q 281 13 serve serve VB cord-000238-om92cx5q 281 14 as as IN cord-000238-om92cx5q 281 15 good good JJ cord-000238-om92cx5q 281 16 targets target NNS cord-000238-om92cx5q 281 17 versus versus IN cord-000238-om92cx5q 281 18 those those DT cord-000238-om92cx5q 281 19 that that WDT cord-000238-om92cx5q 281 20 would would MD cord-000238-om92cx5q 281 21 be be VB cord-000238-om92cx5q 281 22 poor poor JJ cord-000238-om92cx5q 281 23 targets target NNS cord-000238-om92cx5q 281 24 for for IN cord-000238-om92cx5q 281 25 pharmacological pharmacological JJ cord-000238-om92cx5q 281 26 intervention intervention NN cord-000238-om92cx5q 281 27 . . . cord-000238-om92cx5q 282 1 Presumably presumably RB cord-000238-om92cx5q 282 2 , , , cord-000238-om92cx5q 282 3 poor poor JJ cord-000238-om92cx5q 282 4 targets target NNS cord-000238-om92cx5q 282 5 would would MD cord-000238-om92cx5q 282 6 be be VB cord-000238-om92cx5q 282 7 modules module NNS cord-000238-om92cx5q 282 8 that that WDT cord-000238-om92cx5q 282 9 are be VBP cord-000238-om92cx5q 282 10 robust robust JJ cord-000238-om92cx5q 282 11 to to IN cord-000238-om92cx5q 282 12 perturbations perturbation NNS cord-000238-om92cx5q 282 13 , , , cord-000238-om92cx5q 282 14 pharmacological pharmacological JJ cord-000238-om92cx5q 282 15 agents agent NNS cord-000238-om92cx5q 282 16 included include VBD cord-000238-om92cx5q 282 17 . . . cord-000238-om92cx5q 283 1 When when WRB cord-000238-om92cx5q 283 2 designing design VBG cord-000238-om92cx5q 283 3 drugs drug NNS cord-000238-om92cx5q 283 4 to to TO cord-000238-om92cx5q 283 5 treat treat VB cord-000238-om92cx5q 283 6 infections infection NNS cord-000238-om92cx5q 283 7 , , , cord-000238-om92cx5q 283 8 the the DT cord-000238-om92cx5q 283 9 invasion invasion NN cord-000238-om92cx5q 283 10 step step NN cord-000238-om92cx5q 283 11 is be VBZ cord-000238-om92cx5q 283 12 where where WRB cord-000238-om92cx5q 283 13 the the DT cord-000238-om92cx5q 283 14 pathogens pathogen NNS cord-000238-om92cx5q 283 15 might may MD cord-000238-om92cx5q 283 16 be be VB cord-000238-om92cx5q 283 17 most most RBS cord-000238-om92cx5q 283 18 vulnerable vulnerable JJ cord-000238-om92cx5q 283 19 to to IN cord-000238-om92cx5q 283 20 pharmacological pharmacological JJ cord-000238-om92cx5q 283 21 intervention intervention NN cord-000238-om92cx5q 283 22 . . . cord-000238-om92cx5q 284 1 This this DT cord-000238-om92cx5q 284 2 idea idea NN cord-000238-om92cx5q 284 3 is be VBZ cord-000238-om92cx5q 284 4 supported support VBN cord-000238-om92cx5q 284 5 by by IN cord-000238-om92cx5q 284 6 studies study NNS cord-000238-om92cx5q 284 7 in in IN cord-000238-om92cx5q 284 8 which which WDT cord-000238-om92cx5q 284 9 parasite parasite NN cord-000238-om92cx5q 284 10 exposure exposure NN cord-000238-om92cx5q 284 11 to to IN cord-000238-om92cx5q 284 12 chemical chemical NN cord-000238-om92cx5q 284 13 compounds compound NNS cord-000238-om92cx5q 284 14 neutralizes neutralize VBZ cord-000238-om92cx5q 284 15 binding bind VBG cord-000238-om92cx5q 284 16 to to IN cord-000238-om92cx5q 284 17 host host NN cord-000238-om92cx5q 284 18 receptors receptor NNS cord-000238-om92cx5q 284 19 , , , cord-000238-om92cx5q 284 20 fortifying fortify VBG cord-000238-om92cx5q 284 21 the the DT cord-000238-om92cx5q 284 22 importance importance NN cord-000238-om92cx5q 284 23 of of IN cord-000238-om92cx5q 284 24 invasion invasion NN cord-000238-om92cx5q 284 25 to to IN cord-000238-om92cx5q 284 26 the the DT cord-000238-om92cx5q 284 27 establishment establishment NN cord-000238-om92cx5q 284 28 of of IN cord-000238-om92cx5q 284 29 a a DT cord-000238-om92cx5q 284 30 clinical clinical JJ cord-000238-om92cx5q 284 31 infection infection NN cord-000238-om92cx5q 284 32 . . . cord-000238-om92cx5q 285 1 62 62 CD cord-000238-om92cx5q 285 2 , , , cord-000238-om92cx5q 285 3 63 63 CD cord-000238-om92cx5q 286 1 Thus thus RB cord-000238-om92cx5q 286 2 , , , cord-000238-om92cx5q 286 3 many many JJ cord-000238-om92cx5q 286 4 therapeutic therapeutic JJ cord-000238-om92cx5q 286 5 measures measure NNS cord-000238-om92cx5q 286 6 against against IN cord-000238-om92cx5q 286 7 a a DT cord-000238-om92cx5q 286 8 variety variety NN cord-000238-om92cx5q 286 9 of of IN cord-000238-om92cx5q 286 10 pathogens pathogen NNS cord-000238-om92cx5q 286 11 rely rely VBP cord-000238-om92cx5q 286 12 on on IN cord-000238-om92cx5q 286 13 this this DT cord-000238-om92cx5q 286 14 vital vital JJ cord-000238-om92cx5q 286 15 receptor receptor NN cord-000238-om92cx5q 286 16 - - HYPH cord-000238-om92cx5q 286 17 ligand ligand NN cord-000238-om92cx5q 286 18 interaction interaction NN cord-000238-om92cx5q 286 19 . . . cord-000238-om92cx5q 287 1 Virus virus NN cord-000238-om92cx5q 287 2 examples example NNS cord-000238-om92cx5q 287 3 include include VBP cord-000238-om92cx5q 287 4 the the DT cord-000238-om92cx5q 287 5 seasonal seasonal JJ cord-000238-om92cx5q 287 6 influenza influenza NN cord-000238-om92cx5q 287 7 vaccine vaccine NN cord-000238-om92cx5q 287 8 , , , cord-000238-om92cx5q 287 9 and and CC cord-000238-om92cx5q 287 10 fusion fusion NN cord-000238-om92cx5q 287 11 inhibitor inhibitor NN cord-000238-om92cx5q 287 12 compounds compound NNS cord-000238-om92cx5q 287 13 , , , cord-000238-om92cx5q 287 14 a a DT cord-000238-om92cx5q 287 15 class class NN cord-000238-om92cx5q 287 16 of of IN cord-000238-om92cx5q 287 17 anti anti JJ cord-000238-om92cx5q 287 18 - - JJ cord-000238-om92cx5q 287 19 HIV hiv JJ cord-000238-om92cx5q 287 20 therapies therapy NNS cord-000238-om92cx5q 287 21 . . . cord-000238-om92cx5q 288 1 64 64 CD cord-000238-om92cx5q 288 2 , , , cord-000238-om92cx5q 288 3 65 65 CD cord-000238-om92cx5q 289 1 In in IN cord-000238-om92cx5q 289 2 nonvirus nonvirus NNP cord-000238-om92cx5q 289 3 parasites parasite NNS cord-000238-om92cx5q 289 4 the the DT cord-000238-om92cx5q 289 5 situation situation NN cord-000238-om92cx5q 289 6 is be VBZ cord-000238-om92cx5q 289 7 more more RBR cord-000238-om92cx5q 289 8 complicated complicated JJ cord-000238-om92cx5q 289 9 , , , cord-000238-om92cx5q 289 10 because because IN cord-000238-om92cx5q 289 11 the the DT cord-000238-om92cx5q 289 12 process process NN cord-000238-om92cx5q 289 13 of of IN cord-000238-om92cx5q 289 14 invasion invasion NN cord-000238-om92cx5q 289 15 is be VBZ cord-000238-om92cx5q 289 16 a a DT cord-000238-om92cx5q 289 17 complex complex JJ cord-000238-om92cx5q 289 18 module module NN cord-000238-om92cx5q 289 19 involving involve VBG cord-000238-om92cx5q 289 20 several several JJ cord-000238-om92cx5q 289 21 different different JJ cord-000238-om92cx5q 289 22 effectors effector NNS cord-000238-om92cx5q 289 23 . . . cord-000238-om92cx5q 290 1 One one CD cord-000238-om92cx5q 290 2 possible possible JJ cord-000238-om92cx5q 290 3 example example NN cord-000238-om92cx5q 290 4 of of IN cord-000238-om92cx5q 290 5 a a DT cord-000238-om92cx5q 290 6 robust robust JJ cord-000238-om92cx5q 290 7 invasion invasion NN cord-000238-om92cx5q 290 8 module module NN cord-000238-om92cx5q 290 9 is be VBZ cord-000238-om92cx5q 290 10 in in IN cord-000238-om92cx5q 290 11 Plasmodium Plasmodium NNP cord-000238-om92cx5q 290 12 falciparum falciparum NN cord-000238-om92cx5q 290 13 , , , cord-000238-om92cx5q 290 14 the the DT cord-000238-om92cx5q 290 15 causative causative JJ cord-000238-om92cx5q 290 16 agent agent NN cord-000238-om92cx5q 290 17 of of IN cord-000238-om92cx5q 290 18 the the DT cord-000238-om92cx5q 290 19 most most RBS cord-000238-om92cx5q 290 20 deadly deadly JJ cord-000238-om92cx5q 290 21 form form NN cord-000238-om92cx5q 290 22 of of IN cord-000238-om92cx5q 290 23 human human JJ cord-000238-om92cx5q 290 24 malaria malaria NN cord-000238-om92cx5q 290 25 . . . cord-000238-om92cx5q 291 1 In in IN cord-000238-om92cx5q 291 2 P. P. NNP cord-000238-om92cx5q 291 3 falciparum falciparum NN cord-000238-om92cx5q 291 4 and and CC cord-000238-om92cx5q 291 5 the the DT cord-000238-om92cx5q 291 6 apicomplexan apicomplexan NNP cord-000238-om92cx5q 291 7 parasites parasites NNP cord-000238-om92cx5q 291 8 , , , cord-000238-om92cx5q 291 9 an an DT cord-000238-om92cx5q 291 10 apical apical JJ cord-000238-om92cx5q 291 11 complex complex NN cord-000238-om92cx5q 291 12 is be VBZ cord-000238-om92cx5q 291 13 central central JJ cord-000238-om92cx5q 291 14 to to IN cord-000238-om92cx5q 291 15 the the DT cord-000238-om92cx5q 291 16 invasion invasion NN cord-000238-om92cx5q 291 17 process process NN cord-000238-om92cx5q 291 18 , , , cord-000238-om92cx5q 291 19 which which WDT cord-000238-om92cx5q 291 20 includes include VBZ cord-000238-om92cx5q 291 21 multiple multiple JJ cord-000238-om92cx5q 291 22 steps step NNS cord-000238-om92cx5q 291 23 involving involve VBG cord-000238-om92cx5q 291 24 protein protein NN cord-000238-om92cx5q 291 25 interactions interaction NNS cord-000238-om92cx5q 291 26 and and CC cord-000238-om92cx5q 291 27 temporally temporally RB cord-000238-om92cx5q 291 28 and and CC cord-000238-om92cx5q 291 29 spatially spatially RB cord-000238-om92cx5q 291 30 regulated regulated JJ cord-000238-om92cx5q 291 31 expression expression NN cord-000238-om92cx5q 291 32 of of IN cord-000238-om92cx5q 291 33 proteases protease NNS cord-000238-om92cx5q 291 34 and and CC cord-000238-om92cx5q 291 35 polymerization polymerization NN cord-000238-om92cx5q 291 36 machinery machinery NN cord-000238-om92cx5q 291 37 . . . cord-000238-om92cx5q 292 1 63 63 CD cord-000238-om92cx5q 292 2 , , , cord-000238-om92cx5q 292 3 66 66 CD cord-000238-om92cx5q 292 4 , , , cord-000238-om92cx5q 292 5 67 67 CD cord-000238-om92cx5q 293 1 Given give VBN cord-000238-om92cx5q 293 2 the the DT cord-000238-om92cx5q 293 3 importance importance NN cord-000238-om92cx5q 293 4 of of IN cord-000238-om92cx5q 293 5 erythrocytes erythrocyte NNS cord-000238-om92cx5q 293 6 as as IN cord-000238-om92cx5q 293 7 cells cell NNS cord-000238-om92cx5q 293 8 where where WRB cord-000238-om92cx5q 293 9 parasite parasite NN cord-000238-om92cx5q 293 10 replication replication NN cord-000238-om92cx5q 293 11 occurs occur VBZ cord-000238-om92cx5q 293 12 , , , cord-000238-om92cx5q 293 13 one one PRP cord-000238-om92cx5q 293 14 might may MD cord-000238-om92cx5q 293 15 expect expect VB cord-000238-om92cx5q 293 16 that that IN cord-000238-om92cx5q 293 17 P. p. NN cord-000238-om92cx5q 293 18 falciparum falciparum NN cord-000238-om92cx5q 293 19 interactions interaction NNS cord-000238-om92cx5q 293 20 with with IN cord-000238-om92cx5q 293 21 erythrocytes erythrocyte NNS cord-000238-om92cx5q 293 22 should should MD cord-000238-om92cx5q 293 23 be be VB cord-000238-om92cx5q 293 24 particularly particularly RB cord-000238-om92cx5q 293 25 critical critical JJ cord-000238-om92cx5q 293 26 in in IN cord-000238-om92cx5q 293 27 a a DT cord-000238-om92cx5q 293 28 robustness robustness NN cord-000238-om92cx5q 293 29 module module NN cord-000238-om92cx5q 293 30 for for IN cord-000238-om92cx5q 293 31 the the DT cord-000238-om92cx5q 293 32 FIG fig NN cord-000238-om92cx5q 293 33 . . . cord-000238-om92cx5q 294 1 3 3 LS cord-000238-om92cx5q 294 2 . . . cord-000238-om92cx5q 295 1 ͑Color ͑Color . cord-000238-om92cx5q 296 1 online͒ online͒ NNP cord-000238-om92cx5q 296 2 Robustness Robustness NNP cord-000238-om92cx5q 296 3 in in IN cord-000238-om92cx5q 296 4 gene gene NN cord-000238-om92cx5q 296 5 networks network NNS cord-000238-om92cx5q 296 6 of of IN cord-000238-om92cx5q 296 7 influenza influenza NN cord-000238-om92cx5q 296 8 A a DT cord-000238-om92cx5q 296 9 HA HA NNP cord-000238-om92cx5q 296 10 genes gene NNS cord-000238-om92cx5q 296 11 . . . cord-000238-om92cx5q 297 1 Phenotypes phenotype NNS cord-000238-om92cx5q 297 2 are be VBP cord-000238-om92cx5q 297 3 genetically genetically RB cord-000238-om92cx5q 297 4 robust robust JJ cord-000238-om92cx5q 297 5 , , , cord-000238-om92cx5q 297 6 allowing allow VBG cord-000238-om92cx5q 297 7 genotypes genotype NNS cord-000238-om92cx5q 297 8 to to TO cord-000238-om92cx5q 297 9 drift drift VB cord-000238-om92cx5q 297 10 through through IN cord-000238-om92cx5q 297 11 genotypic genotypic JJ cord-000238-om92cx5q 297 12 neutral neutral JJ cord-000238-om92cx5q 297 13 space space NN cord-000238-om92cx5q 297 14 before before IN cord-000238-om92cx5q 297 15 instant instant JJ cord-000238-om92cx5q 297 16 shifts shift NNS cord-000238-om92cx5q 297 17 in in IN cord-000238-om92cx5q 297 18 phenotype phenotype NN cord-000238-om92cx5q 297 19 . . . cord-000238-om92cx5q 298 1 Such such PDT cord-000238-om92cx5q 298 2 a a DT cord-000238-om92cx5q 298 3 scenario scenario NN cord-000238-om92cx5q 298 4 is be VBZ cord-000238-om92cx5q 298 5 a a DT cord-000238-om92cx5q 298 6 demonstration demonstration NN cord-000238-om92cx5q 298 7 , , , cord-000238-om92cx5q 298 8 from from IN cord-000238-om92cx5q 298 9 the the DT cord-000238-om92cx5q 298 10 actual actual JJ cord-000238-om92cx5q 298 11 epidemiological epidemiological JJ cord-000238-om92cx5q 298 12 literature literature NN cord-000238-om92cx5q 298 13 , , , cord-000238-om92cx5q 298 14 of of IN cord-000238-om92cx5q 298 15 how how WRB cord-000238-om92cx5q 298 16 genetic genetic JJ cord-000238-om92cx5q 298 17 robustness robustness NN cord-000238-om92cx5q 298 18 can can MD cord-000238-om92cx5q 298 19 facilitate facilitate VB cord-000238-om92cx5q 298 20 evolvability evolvability NN cord-000238-om92cx5q 298 21 in in IN cord-000238-om92cx5q 298 22 infectious infectious JJ cord-000238-om92cx5q 298 23 disease disease NN cord-000238-om92cx5q 298 24 agents agent NNS cord-000238-om92cx5q 298 25 . . . cord-000238-om92cx5q 299 1 ͓From ͓from IN cord-000238-om92cx5q 299 2 E. E. NNP cord-000238-om92cx5q 299 3 van van NNP cord-000238-om92cx5q 299 4 Nimwegen Nimwegen NNP cord-000238-om92cx5q 299 5 , , , cord-000238-om92cx5q 299 6 Science Science NNP cord-000238-om92cx5q 299 7 314 314 CD cord-000238-om92cx5q 299 8 , , , cord-000238-om92cx5q 299 9 1884 1884 CD cord-000238-om92cx5q 299 10 , , , cord-000238-om92cx5q 299 11 2006 2006 CD cord-000238-om92cx5q 299 12 . . . cord-000238-om92cx5q 300 1 Reprinted reprint VBN cord-000238-om92cx5q 300 2 with with IN cord-000238-om92cx5q 300 3 permission permission NN cord-000238-om92cx5q 300 4 from from IN cord-000238-om92cx5q 300 5 AAAS.͔ AAAS.͔ NNP cord-000238-om92cx5q 300 6 pathogen pathogen NN cord-000238-om92cx5q 300 7 . . . cord-000238-om92cx5q 301 1 In in IN cord-000238-om92cx5q 301 2 fact fact NN cord-000238-om92cx5q 301 3 , , , cord-000238-om92cx5q 301 4 studies study NNS cord-000238-om92cx5q 301 5 show show VBP cord-000238-om92cx5q 301 6 that that IN cord-000238-om92cx5q 301 7 the the DT cord-000238-om92cx5q 301 8 erythrocyteattachment erythrocyteattachment NN cord-000238-om92cx5q 301 9 process process NN cord-000238-om92cx5q 301 10 involves involve VBZ cord-000238-om92cx5q 301 11 redundancy redundancy NN cord-000238-om92cx5q 301 12 in in IN cord-000238-om92cx5q 301 13 ligands ligand NNS cord-000238-om92cx5q 301 14 used use VBN cord-000238-om92cx5q 301 15 for for IN cord-000238-om92cx5q 301 16 binding bind VBG cord-000238-om92cx5q 301 17 of of IN cord-000238-om92cx5q 301 18 the the DT cord-000238-om92cx5q 301 19 pathogen pathogen NN cord-000238-om92cx5q 301 20 to to IN cord-000238-om92cx5q 301 21 erythrocyte erythrocyte NN cord-000238-om92cx5q 301 22 receptors receptor NNS cord-000238-om92cx5q 301 23 . . . cord-000238-om92cx5q 302 1 68 68 CD cord-000238-om92cx5q 302 2 , , , cord-000238-om92cx5q 302 3 62 62 CD cord-000238-om92cx5q 303 1 This this DT cord-000238-om92cx5q 303 2 evolved evolve VBD cord-000238-om92cx5q 303 3 strategy strategy NN cord-000238-om92cx5q 303 4 might may MD cord-000238-om92cx5q 303 5 have have VB cord-000238-om92cx5q 303 6 been be VBN cord-000238-om92cx5q 303 7 selected select VBN cord-000238-om92cx5q 303 8 in in IN cord-000238-om92cx5q 303 9 P. P. NNP cord-000238-om92cx5q 303 10 falciparum falciparum NN cord-000238-om92cx5q 303 11 because because IN cord-000238-om92cx5q 303 12 erythrocyte erythrocyte NN cord-000238-om92cx5q 303 13 receptors receptor NNS cord-000238-om92cx5q 303 14 are be VBP cord-000238-om92cx5q 303 15 highly highly RB cord-000238-om92cx5q 303 16 polymorphic polymorphic JJ cord-000238-om92cx5q 303 17 , , , cord-000238-om92cx5q 303 18 perhaps perhaps RB cord-000238-om92cx5q 303 19 among among IN cord-000238-om92cx5q 303 20 the the DT cord-000238-om92cx5q 303 21 fastest fast JJS cord-000238-om92cx5q 303 22 evolving evolve VBG cord-000238-om92cx5q 303 23 genes gene NNS cord-000238-om92cx5q 303 24 in in IN cord-000238-om92cx5q 303 25 the the DT cord-000238-om92cx5q 303 26 human human JJ cord-000238-om92cx5q 303 27 genome genome NN cord-000238-om92cx5q 303 28 . . . cord-000238-om92cx5q 304 1 69 69 CD cord-000238-om92cx5q 304 2 , , , cord-000238-om92cx5q 304 3 70 70 CD cord-000238-om92cx5q 304 4 Research Research NNP cord-000238-om92cx5q 304 5 shows show VBZ cord-000238-om92cx5q 304 6 that that IN cord-000238-om92cx5q 304 7 P. P. NNP cord-000238-om92cx5q 304 8 falciparum falciparum NN cord-000238-om92cx5q 304 9 utilizes utilize VBZ cord-000238-om92cx5q 304 10 a a DT cord-000238-om92cx5q 304 11 plethora plethora NN cord-000238-om92cx5q 304 12 of of IN cord-000238-om92cx5q 304 13 ligands ligand NNS cord-000238-om92cx5q 304 14 to to TO cord-000238-om92cx5q 304 15 bind bind VB cord-000238-om92cx5q 304 16 erythrocyte erythrocyte NN cord-000238-om92cx5q 304 17 receptors receptor NNS cord-000238-om92cx5q 304 18 . . . cord-000238-om92cx5q 305 1 62 62 CD cord-000238-om92cx5q 305 2 , , , cord-000238-om92cx5q 305 3 68 68 CD cord-000238-om92cx5q 305 4 , , , cord-000238-om92cx5q 305 5 70 70 CD cord-000238-om92cx5q 306 1 Interestingly interestingly RB cord-000238-om92cx5q 306 2 , , , cord-000238-om92cx5q 306 3 a a DT cord-000238-om92cx5q 306 4 " " `` cord-000238-om92cx5q 306 5 molecular molecular JJ cord-000238-om92cx5q 306 6 hierarchy hierarchy NN cord-000238-om92cx5q 306 7 " " '' cord-000238-om92cx5q 306 8 may may MD cord-000238-om92cx5q 306 9 be be VB cord-000238-om92cx5q 306 10 the the DT cord-000238-om92cx5q 306 11 ideal ideal JJ cord-000238-om92cx5q 306 12 term term NN cord-000238-om92cx5q 306 13 to to TO cord-000238-om92cx5q 306 14 describe describe VB cord-000238-om92cx5q 306 15 ligand ligand NN cord-000238-om92cx5q 306 16 usage usage NN cord-000238-om92cx5q 306 17 in in IN cord-000238-om92cx5q 306 18 P. P. NNP cord-000238-om92cx5q 306 19 falciparum falciparum NN cord-000238-om92cx5q 306 20 ; ; : cord-000238-om92cx5q 306 21 the the DT cord-000238-om92cx5q 306 22 pathogen pathogen NN cord-000238-om92cx5q 306 23 's 's POS cord-000238-om92cx5q 306 24 invasion invasion NN cord-000238-om92cx5q 306 25 module module NN cord-000238-om92cx5q 306 26 may may MD cord-000238-om92cx5q 306 27 consist consist VB cord-000238-om92cx5q 306 28 of of IN cord-000238-om92cx5q 306 29 a a DT cord-000238-om92cx5q 306 30 hierarchy hierarchy NN cord-000238-om92cx5q 306 31 whereby whereby WRB cord-000238-om92cx5q 306 32 some some DT cord-000238-om92cx5q 306 33 ligands ligand NNS cord-000238-om92cx5q 306 34 used use VBN cord-000238-om92cx5q 306 35 in in IN cord-000238-om92cx5q 306 36 attachment attachment NN cord-000238-om92cx5q 306 37 are be VBP cord-000238-om92cx5q 306 38 preferred prefer VBN cord-000238-om92cx5q 306 39 over over IN cord-000238-om92cx5q 306 40 others other NNS cord-000238-om92cx5q 306 41 , , , cord-000238-om92cx5q 306 42 with with IN cord-000238-om92cx5q 306 43 the the DT cord-000238-om92cx5q 306 44 switch switch NN cord-000238-om92cx5q 306 45 in in IN cord-000238-om92cx5q 306 46 usage usage NN cord-000238-om92cx5q 306 47 only only RB cord-000238-om92cx5q 306 48 taking take VBG cord-000238-om92cx5q 306 49 place place NN cord-000238-om92cx5q 306 50 when when WRB cord-000238-om92cx5q 306 51 a a DT cord-000238-om92cx5q 306 52 ligand ligand NN cord-000238-om92cx5q 306 53 higher high JJR cord-000238-om92cx5q 306 54 up up RB cord-000238-om92cx5q 306 55 in in IN cord-000238-om92cx5q 306 56 the the DT cord-000238-om92cx5q 306 57 hierarchy hierarchy NN cord-000238-om92cx5q 306 58 is be VBZ cord-000238-om92cx5q 306 59 ineffective ineffective JJ cord-000238-om92cx5q 306 60 ͑Fig ͑Fig NNS cord-000238-om92cx5q 306 61 . . . cord-000238-om92cx5q 307 1 4͒. 4͒. CD cord-000238-om92cx5q 308 1 68 68 CD cord-000238-om92cx5q 309 1 This this DT cord-000238-om92cx5q 309 2 observation observation NN cord-000238-om92cx5q 309 3 may may MD cord-000238-om92cx5q 309 4 be be VB cord-000238-om92cx5q 309 5 usefully usefully RB cord-000238-om92cx5q 309 6 couched couch VBN cord-000238-om92cx5q 309 7 in in IN cord-000238-om92cx5q 309 8 terms term NNS cord-000238-om92cx5q 309 9 of of IN cord-000238-om92cx5q 309 10 robustness robustness NN cord-000238-om92cx5q 309 11 , , , cord-000238-om92cx5q 309 12 because because IN cord-000238-om92cx5q 309 13 redundancy redundancy NN cord-000238-om92cx5q 309 14 is be VBZ cord-000238-om92cx5q 309 15 a a DT cord-000238-om92cx5q 309 16 possible possible JJ cord-000238-om92cx5q 309 17 mechanism mechanism NN cord-000238-om92cx5q 309 18 for for IN cord-000238-om92cx5q 309 19 constructing construct VBG cord-000238-om92cx5q 309 20 a a DT cord-000238-om92cx5q 309 21 robust robust JJ cord-000238-om92cx5q 309 22 biological biological JJ cord-000238-om92cx5q 309 23 system system NN cord-000238-om92cx5q 309 24 . . . cord-000238-om92cx5q 310 1 To to TO cord-000238-om92cx5q 310 2 ensure ensure VB cord-000238-om92cx5q 310 3 that that IN cord-000238-om92cx5q 310 4 an an DT cord-000238-om92cx5q 310 5 essential essential JJ cord-000238-om92cx5q 310 6 function function NN cord-000238-om92cx5q 310 7 is be VBZ cord-000238-om92cx5q 310 8 carried carry VBN cord-000238-om92cx5q 310 9 out out RP cord-000238-om92cx5q 310 10 , , , cord-000238-om92cx5q 310 11 a a DT cord-000238-om92cx5q 310 12 biological biological JJ cord-000238-om92cx5q 310 13 system system NN cord-000238-om92cx5q 310 14 can can MD cord-000238-om92cx5q 310 15 be be VB cord-000238-om92cx5q 310 16 organized organize VBN cord-000238-om92cx5q 310 17 to to TO cord-000238-om92cx5q 310 18 contain contain VB cord-000238-om92cx5q 310 19 several several JJ cord-000238-om92cx5q 310 20 alternative alternative JJ cord-000238-om92cx5q 310 21 pathways pathway NNS cord-000238-om92cx5q 310 22 in in IN cord-000238-om92cx5q 310 23 the the DT cord-000238-om92cx5q 310 24 event event NN cord-000238-om92cx5q 310 25 that that WDT cord-000238-om92cx5q 310 26 one one CD cord-000238-om92cx5q 310 27 or or CC cord-000238-om92cx5q 310 28 more more RBR cord-000238-om92cx5q 310 29 become become VBN cord-000238-om92cx5q 310 30 unavailable unavailable JJ cord-000238-om92cx5q 310 31 or or CC cord-000238-om92cx5q 310 32 dysfunctional dysfunctional JJ cord-000238-om92cx5q 310 33 . . . cord-000238-om92cx5q 311 1 This this DT cord-000238-om92cx5q 311 2 evolved evolve VBD cord-000238-om92cx5q 311 3 strategy strategy NN cord-000238-om92cx5q 311 4 decreases decrease VBZ cord-000238-om92cx5q 311 5 the the DT cord-000238-om92cx5q 311 6 probability probability NN cord-000238-om92cx5q 311 7 that that IN cord-000238-om92cx5q 311 8 an an DT cord-000238-om92cx5q 311 9 environmental environmental JJ cord-000238-om92cx5q 311 10 perturbation perturbation NN cord-000238-om92cx5q 311 11 disrupts disrupt VBZ cord-000238-om92cx5q 311 12 performance performance NN cord-000238-om92cx5q 311 13 . . . cord-000238-om92cx5q 312 1 The the DT cord-000238-om92cx5q 312 2 concept concept NN cord-000238-om92cx5q 312 3 of of IN cord-000238-om92cx5q 312 4 robustness robustness NN cord-000238-om92cx5q 312 5 has have VBZ cord-000238-om92cx5q 312 6 the the DT cord-000238-om92cx5q 312 7 continued continue VBN cord-000238-om92cx5q 312 8 potential potential NN cord-000238-om92cx5q 312 9 to to TO cord-000238-om92cx5q 312 10 shift shift VB cord-000238-om92cx5q 312 11 paradigms paradigm NNS cord-000238-om92cx5q 312 12 in in IN cord-000238-om92cx5q 312 13 biology biology NN cord-000238-om92cx5q 312 14 by by IN cord-000238-om92cx5q 312 15 challenging challenge VBG cord-000238-om92cx5q 312 16 assumed assume VBN cord-000238-om92cx5q 312 17 relationships relationship NNS cord-000238-om92cx5q 312 18 between between IN cord-000238-om92cx5q 312 19 genotypes genotype NNS cord-000238-om92cx5q 312 20 and and CC cord-000238-om92cx5q 312 21 phenotypes phenotype NNS cord-000238-om92cx5q 312 22 . . . cord-000238-om92cx5q 313 1 Here here RB cord-000238-om92cx5q 313 2 we -PRON- PRP cord-000238-om92cx5q 313 3 have have VBP cord-000238-om92cx5q 313 4 highlighted highlight VBN cord-000238-om92cx5q 313 5 some some DT cord-000238-om92cx5q 313 6 of of IN cord-000238-om92cx5q 313 7 the the DT cord-000238-om92cx5q 313 8 empirical empirical JJ cord-000238-om92cx5q 313 9 evidence evidence NN cord-000238-om92cx5q 313 10 for for IN cord-000238-om92cx5q 313 11 evolution evolution NN cord-000238-om92cx5q 313 12 of of IN cord-000238-om92cx5q 313 13 robustness robustness NN cord-000238-om92cx5q 313 14 , , , cord-000238-om92cx5q 313 15 and and CC cord-000238-om92cx5q 313 16 discussed discuss VBD cord-000238-om92cx5q 313 17 its -PRON- PRP$ cord-000238-om92cx5q 313 18 relevance relevance NN cord-000238-om92cx5q 313 19 for for IN cord-000238-om92cx5q 313 20 evolution evolution NN cord-000238-om92cx5q 313 21 of of IN cord-000238-om92cx5q 313 22 infectious infectious JJ cord-000238-om92cx5q 313 23 diseases disease NNS cord-000238-om92cx5q 313 24 , , , cord-000238-om92cx5q 313 25 particularly particularly RB cord-000238-om92cx5q 313 26 in in IN cord-000238-om92cx5q 313 27 humans human NNS cord-000238-om92cx5q 313 28 . . . cord-000238-om92cx5q 314 1 Despite despite IN cord-000238-om92cx5q 314 2 the the DT cord-000238-om92cx5q 314 3 widereaching widereaching JJ cord-000238-om92cx5q 314 4 importance importance NN cord-000238-om92cx5q 314 5 of of IN cord-000238-om92cx5q 314 6 robustness robustness NN cord-000238-om92cx5q 314 7 theory theory NN cord-000238-om92cx5q 314 8 in in IN cord-000238-om92cx5q 314 9 biology biology NN cord-000238-om92cx5q 314 10 and and CC cord-000238-om92cx5q 314 11 other other JJ cord-000238-om92cx5q 314 12 disciplines discipline NNS cord-000238-om92cx5q 314 13 , , , cord-000238-om92cx5q 314 14 we -PRON- PRP cord-000238-om92cx5q 314 15 emphasize emphasize VBP cord-000238-om92cx5q 314 16 that that IN cord-000238-om92cx5q 314 17 the the DT cord-000238-om92cx5q 314 18 origins origin NNS cord-000238-om92cx5q 314 19 and and CC cord-000238-om92cx5q 314 20 implications implication NNS cord-000238-om92cx5q 314 21 of of IN cord-000238-om92cx5q 314 22 robustness robustness NN cord-000238-om92cx5q 314 23 may may MD cord-000238-om92cx5q 314 24 be be VB cord-000238-om92cx5q 314 25 highly highly RB cord-000238-om92cx5q 314 26 context context JJ cord-000238-om92cx5q 314 27 specific specific JJ cord-000238-om92cx5q 314 28 . . . cord-000238-om92cx5q 315 1 The the DT cord-000238-om92cx5q 315 2 underlying underlie VBG cord-000238-om92cx5q 315 3 causes cause NNS cord-000238-om92cx5q 315 4 of of IN cord-000238-om92cx5q 315 5 diseases disease NNS cord-000238-om92cx5q 315 6 in in IN cord-000238-om92cx5q 315 7 humans human NNS cord-000238-om92cx5q 315 8 and and CC cord-000238-om92cx5q 315 9 other other JJ cord-000238-om92cx5q 315 10 organisms organism NNS cord-000238-om92cx5q 315 11 are be VBP cord-000238-om92cx5q 315 12 manifold manifold JJ cord-000238-om92cx5q 315 13 . . . cord-000238-om92cx5q 316 1 To to TO cord-000238-om92cx5q 316 2 wield wield VB cord-000238-om92cx5q 316 3 the the DT cord-000238-om92cx5q 316 4 robustness robustness NN cord-000238-om92cx5q 316 5 concept concept NN cord-000238-om92cx5q 316 6 effectively effectively RB cord-000238-om92cx5q 316 7 in in IN cord-000238-om92cx5q 316 8 the the DT cord-000238-om92cx5q 316 9 evolution evolution NN cord-000238-om92cx5q 316 10 of of IN cord-000238-om92cx5q 316 11 infectious infectious JJ cord-000238-om92cx5q 316 12 diseases disease NNS cord-000238-om92cx5q 316 13 , , , cord-000238-om92cx5q 316 14 sufficient sufficient JJ cord-000238-om92cx5q 316 15 understanding understanding NN cord-000238-om92cx5q 316 16 of of IN cord-000238-om92cx5q 316 17 how how WRB cord-000238-om92cx5q 316 18 ecological ecological JJ cord-000238-om92cx5q 316 19 history history NN cord-000238-om92cx5q 316 20 might may MD cord-000238-om92cx5q 316 21 have have VB cord-000238-om92cx5q 316 22 selected select VBN cord-000238-om92cx5q 316 23 for for IN cord-000238-om92cx5q 316 24 robustness robustness NN cord-000238-om92cx5q 316 25 is be VBZ cord-000238-om92cx5q 316 26 warranted warrant VBN cord-000238-om92cx5q 316 27 . . . cord-000238-om92cx5q 317 1 Robustness robustness NN cord-000238-om92cx5q 317 2 has have VBZ cord-000238-om92cx5q 317 3 often often RB cord-000238-om92cx5q 317 4 resided reside VBN cord-000238-om92cx5q 317 5 in in IN cord-000238-om92cx5q 317 6 the the DT cord-000238-om92cx5q 317 7 realm realm NN cord-000238-om92cx5q 317 8 of of IN cord-000238-om92cx5q 317 9 mathematical mathematical JJ cord-000238-om92cx5q 317 10 theory theory NN cord-000238-om92cx5q 317 11 , , , cord-000238-om92cx5q 317 12 but but CC cord-000238-om92cx5q 317 13 future future JJ cord-000238-om92cx5q 317 14 work work NN cord-000238-om92cx5q 317 15 would would MD cord-000238-om92cx5q 317 16 benefit benefit VB cord-000238-om92cx5q 317 17 from from IN cord-000238-om92cx5q 317 18 col col NNP cord-000238-om92cx5q 317 19 - - HYPH cord-000238-om92cx5q 317 20 laborations laboration NNS cord-000238-om92cx5q 317 21 between between IN cord-000238-om92cx5q 317 22 empiricists empiricist NNS cord-000238-om92cx5q 317 23 and and CC cord-000238-om92cx5q 317 24 theoreticians theoretician NNS cord-000238-om92cx5q 317 25 to to TO cord-000238-om92cx5q 317 26 test test VB cord-000238-om92cx5q 317 27 explicitly explicitly RB cord-000238-om92cx5q 317 28 predictions prediction NNS cord-000238-om92cx5q 317 29 using use VBG cord-000238-om92cx5q 317 30 tractable tractable JJ cord-000238-om92cx5q 317 31 models model NNS cord-000238-om92cx5q 317 32 , , , cord-000238-om92cx5q 317 33 or or CC cord-000238-om92cx5q 317 34 disease disease NN cord-000238-om92cx5q 317 35 pathogens pathogen NNS cord-000238-om92cx5q 317 36 . . . cord-000238-om92cx5q 318 1 These these DT cord-000238-om92cx5q 318 2 efforts effort NNS cord-000238-om92cx5q 318 3 would would MD cord-000238-om92cx5q 318 4 help help VB cord-000238-om92cx5q 318 5 to to TO cord-000238-om92cx5q 318 6 elucidate elucidate VB cord-000238-om92cx5q 318 7 further further RB cord-000238-om92cx5q 318 8 the the DT cord-000238-om92cx5q 318 9 role role NN cord-000238-om92cx5q 318 10 of of IN cord-000238-om92cx5q 318 11 robustness robustness NN cord-000238-om92cx5q 318 12 in in IN cord-000238-om92cx5q 318 13 past past JJ cord-000238-om92cx5q 318 14 evolution evolution NN cord-000238-om92cx5q 318 15 of of IN cord-000238-om92cx5q 318 16 parasites parasite NNS cord-000238-om92cx5q 318 17 such such JJ cord-000238-om92cx5q 318 18 as as IN cord-000238-om92cx5q 318 19 influenza influenza NN cord-000238-om92cx5q 318 20 A a DT cord-000238-om92cx5q 318 21 virus virus NN cord-000238-om92cx5q 318 22 and and CC cord-000238-om92cx5q 318 23 P. p. NN cord-000238-om92cx5q 318 24 falciparum falciparum NNS cord-000238-om92cx5q 318 25 , , , cord-000238-om92cx5q 318 26 and and CC cord-000238-om92cx5q 318 27 to to TO cord-000238-om92cx5q 318 28 predict predict VB cord-000238-om92cx5q 318 29 how how WRB cord-000238-om92cx5q 318 30 it -PRON- PRP cord-000238-om92cx5q 318 31 might may MD cord-000238-om92cx5q 318 32 play play VB cord-000238-om92cx5q 318 33 a a DT cord-000238-om92cx5q 318 34 role role NN cord-000238-om92cx5q 318 35 in in IN cord-000238-om92cx5q 318 36 their -PRON- PRP$ cord-000238-om92cx5q 318 37 future future JJ cord-000238-om92cx5q 318 38 evolutionary evolutionary JJ cord-000238-om92cx5q 318 39 change change NN cord-000238-om92cx5q 318 40 . . . cord-000238-om92cx5q 319 1 Empirical empirical JJ cord-000238-om92cx5q 319 2 evidence evidence NN cord-000238-om92cx5q 319 3 for for IN cord-000238-om92cx5q 319 4 unifying unifying JJ cord-000238-om92cx5q 319 5 principles principle NNS cord-000238-om92cx5q 319 6 in in IN cord-000238-om92cx5q 319 7 biology biology NN cord-000238-om92cx5q 319 8 is be VBZ cord-000238-om92cx5q 319 9 often often RB cord-000238-om92cx5q 319 10 sought seek VBN cord-000238-om92cx5q 319 11 , , , cord-000238-om92cx5q 319 12 but but CC cord-000238-om92cx5q 319 13 is be VBZ cord-000238-om92cx5q 319 14 not not RB cord-000238-om92cx5q 319 15 easily easily RB cord-000238-om92cx5q 319 16 achieved achieve VBN cord-000238-om92cx5q 319 17 . . . cord-000238-om92cx5q 320 1 One one CD cord-000238-om92cx5q 320 2 consequence consequence NN cord-000238-om92cx5q 320 3 of of IN cord-000238-om92cx5q 320 4 earth earth NN cord-000238-om92cx5q 320 5 's 's POS cord-000238-om92cx5q 320 6 biodiversity biodiversity NN cord-000238-om92cx5q 320 7 is be VBZ cord-000238-om92cx5q 320 8 that that IN cord-000238-om92cx5q 320 9 exceptions exception NNS cord-000238-om92cx5q 320 10 to to IN cord-000238-om92cx5q 320 11 general general JJ cord-000238-om92cx5q 320 12 rules rule NNS cord-000238-om92cx5q 320 13 are be VBP cord-000238-om92cx5q 320 14 often often RB cord-000238-om92cx5q 320 15 found find VBN cord-000238-om92cx5q 320 16 if if IN cord-000238-om92cx5q 320 17 one one CD cord-000238-om92cx5q 320 18 searches search VBZ cord-000238-om92cx5q 320 19 hard hard RB cord-000238-om92cx5q 320 20 enough enough RB cord-000238-om92cx5q 320 21 . . . cord-000238-om92cx5q 321 1 For for IN cord-000238-om92cx5q 321 2 example example NN cord-000238-om92cx5q 321 3 , , , cord-000238-om92cx5q 321 4 a a DT cord-000238-om92cx5q 321 5 popular popular JJ cord-000238-om92cx5q 321 6 notion notion NN cord-000238-om92cx5q 321 7 in in IN cord-000238-om92cx5q 321 8 biomedicine biomedicine NN cord-000238-om92cx5q 321 9 was be VBD cord-000238-om92cx5q 321 10 that that IN cord-000238-om92cx5q 321 11 parasites parasite NNS cord-000238-om92cx5q 321 12 should should MD cord-000238-om92cx5q 321 13 inevitably inevitably RB cord-000238-om92cx5q 321 14 evolve evolve VB cord-000238-om92cx5q 321 15 to to TO cord-000238-om92cx5q 321 16 become become VB cord-000238-om92cx5q 321 17 mutualistic mutualistic JJ cord-000238-om92cx5q 321 18 to to IN cord-000238-om92cx5q 321 19 their -PRON- PRP$ cord-000238-om92cx5q 321 20 hosts host NNS cord-000238-om92cx5q 321 21 , , , cord-000238-om92cx5q 321 22 because because IN cord-000238-om92cx5q 321 23 this this DT cord-000238-om92cx5q 321 24 would would MD cord-000238-om92cx5q 321 25 afford afford VB cord-000238-om92cx5q 321 26 long long JJ cord-000238-om92cx5q 321 27 - - HYPH cord-000238-om92cx5q 321 28 term term NN cord-000238-om92cx5q 321 29 survival survival NN cord-000238-om92cx5q 321 30 of of IN cord-000238-om92cx5q 321 31 a a DT cord-000238-om92cx5q 321 32 parasite parasite NN cord-000238-om92cx5q 321 33 species specie NNS cord-000238-om92cx5q 321 34 that that WDT cord-000238-om92cx5q 321 35 might may MD cord-000238-om92cx5q 321 36 otherwise otherwise RB cord-000238-om92cx5q 321 37 force force VB cord-000238-om92cx5q 321 38 its -PRON- PRP$ cord-000238-om92cx5q 321 39 host host NN cord-000238-om92cx5q 321 40 into into IN cord-000238-om92cx5q 321 41 extinction extinction NN cord-000238-om92cx5q 321 42 . . . cord-000238-om92cx5q 322 1 However however RB cord-000238-om92cx5q 322 2 , , , cord-000238-om92cx5q 322 3 theory theory NN cord-000238-om92cx5q 322 4 and and CC cord-000238-om92cx5q 322 5 experiments experiment NNS cord-000238-om92cx5q 322 6 later later RB cord-000238-om92cx5q 322 7 overturned overturn VBD cord-000238-om92cx5q 322 8 this this DT cord-000238-om92cx5q 322 9 conventional conventional JJ cord-000238-om92cx5q 322 10 wisdom wisdom NN cord-000238-om92cx5q 322 11 by by IN cord-000238-om92cx5q 322 12 demonstrating demonstrate VBG cord-000238-om92cx5q 322 13 that that IN cord-000238-om92cx5q 322 14 infectious infectious JJ cord-000238-om92cx5q 322 15 parasites parasite NNS cord-000238-om92cx5q 322 16 may may MD cord-000238-om92cx5q 322 17 evolve evolve VB cord-000238-om92cx5q 322 18 greater great JJR cord-000238-om92cx5q 322 19 or or CC cord-000238-om92cx5q 322 20 lesser less JJR cord-000238-om92cx5q 322 21 virulence virulence NN cord-000238-om92cx5q 322 22 ͑damage ͑damage VBN cord-000238-om92cx5q 322 23 to to IN cord-000238-om92cx5q 322 24 the the DT cord-000238-om92cx5q 322 25 host͒ host͒ NN cord-000238-om92cx5q 322 26 depending depend VBG cord-000238-om92cx5q 322 27 on on IN cord-000238-om92cx5q 322 28 their -PRON- PRP$ cord-000238-om92cx5q 322 29 unique unique JJ cord-000238-om92cx5q 322 30 ecologies ecology NNS cord-000238-om92cx5q 322 31 . . . cord-000238-om92cx5q 323 1 [ [ -LRB- cord-000238-om92cx5q 323 2 71 71 CD cord-000238-om92cx5q 323 3 ] ] -RRB- cord-000238-om92cx5q 323 4 [ [ -LRB- cord-000238-om92cx5q 323 5 72 72 CD cord-000238-om92cx5q 323 6 ] ] -RRB- cord-000238-om92cx5q 323 7 [ [ -LRB- cord-000238-om92cx5q 323 8 73 73 CD cord-000238-om92cx5q 323 9 ] ] -RRB- cord-000238-om92cx5q 323 10 [ [ -LRB- cord-000238-om92cx5q 323 11 74 74 CD cord-000238-om92cx5q 323 12 ] ] -RRB- cord-000238-om92cx5q 324 1 Similarly similarly RB cord-000238-om92cx5q 324 2 , , , cord-000238-om92cx5q 324 3 it -PRON- PRP cord-000238-om92cx5q 324 4 should should MD cord-000238-om92cx5q 324 5 be be VB cord-000238-om92cx5q 324 6 expected expect VBN cord-000238-om92cx5q 324 7 that that IN cord-000238-om92cx5q 324 8 evolution evolution NN cord-000238-om92cx5q 324 9 of of IN cord-000238-om92cx5q 324 10 robustness robustness NN cord-000238-om92cx5q 324 11 and and CC cord-000238-om92cx5q 324 12 its -PRON- PRP$ cord-000238-om92cx5q 324 13 underlying underlying JJ cord-000238-om92cx5q 324 14 mechanism mechanism NN cord-000238-om92cx5q 324 15 might may MD cord-000238-om92cx5q 324 16 differ differ VB cord-000238-om92cx5q 324 17 substantially substantially RB cord-000238-om92cx5q 324 18 across across IN cord-000238-om92cx5q 324 19 the the DT cord-000238-om92cx5q 324 20 biosphere biosphere NN cord-000238-om92cx5q 324 21 . . . cord-000238-om92cx5q 325 1 Therefore therefore RB cord-000238-om92cx5q 325 2 , , , cord-000238-om92cx5q 325 3 caution caution NN cord-000238-om92cx5q 325 4 is be VBZ cord-000238-om92cx5q 325 5 warranted warrant VBN cord-000238-om92cx5q 325 6 when when WRB cord-000238-om92cx5q 325 7 attempting attempt VBG cord-000238-om92cx5q 325 8 to to TO cord-000238-om92cx5q 325 9 draw draw VB cord-000238-om92cx5q 325 10 widespread widespread JJ cord-000238-om92cx5q 325 11 conclusions conclusion NNS cord-000238-om92cx5q 325 12 from from IN cord-000238-om92cx5q 325 13 the the DT cord-000238-om92cx5q 325 14 handful handful NN cord-000238-om92cx5q 325 15 of of IN cord-000238-om92cx5q 325 16 valuable valuable JJ cord-000238-om92cx5q 325 17 empirical empirical JJ cord-000238-om92cx5q 325 18 studies study NNS cord-000238-om92cx5q 325 19 on on IN cord-000238-om92cx5q 325 20 evolution evolution NN cord-000238-om92cx5q 325 21 of of IN cord-000238-om92cx5q 325 22 robustness robustness NN cord-000238-om92cx5q 325 23 . . . cord-000238-om92cx5q 326 1 Perhaps perhaps RB cord-000238-om92cx5q 326 2 it -PRON- PRP cord-000238-om92cx5q 326 3 is be VBZ cord-000238-om92cx5q 326 4 possible possible JJ cord-000238-om92cx5q 326 5 to to TO cord-000238-om92cx5q 326 6 construct construct VB cord-000238-om92cx5q 326 7 a a DT cord-000238-om92cx5q 326 8 universal universal JJ cord-000238-om92cx5q 326 9 theory theory NN cord-000238-om92cx5q 326 10 of of IN cord-000238-om92cx5q 326 11 robustness robustness NN cord-000238-om92cx5q 326 12 that that WDT cord-000238-om92cx5q 326 13 applies apply VBZ cord-000238-om92cx5q 326 14 everywhere everywhere RB cord-000238-om92cx5q 326 15 , , , cord-000238-om92cx5q 326 16 but but CC cord-000238-om92cx5q 326 17 this this DT cord-000238-om92cx5q 326 18 is be VBZ cord-000238-om92cx5q 326 19 unknown unknown JJ cord-000238-om92cx5q 326 20 . . . cord-000238-om92cx5q 327 1 Our -PRON- PRP$ cord-000238-om92cx5q 327 2 hope hope NN cord-000238-om92cx5q 327 3 is be VBZ cord-000238-om92cx5q 327 4 that that IN cord-000238-om92cx5q 327 5 the the DT cord-000238-om92cx5q 327 6 exciting exciting JJ cord-000238-om92cx5q 327 7 studies study NNS cord-000238-om92cx5q 327 8 and and CC cord-000238-om92cx5q 327 9 biological biological JJ cord-000238-om92cx5q 327 10 examples example NNS cord-000238-om92cx5q 327 11 presented present VBN cord-000238-om92cx5q 327 12 here here RB cord-000238-om92cx5q 327 13 will will MD cord-000238-om92cx5q 327 14 further further RB cord-000238-om92cx5q 327 15 motivate motivate VB cord-000238-om92cx5q 327 16 researchers researcher NNS cord-000238-om92cx5q 327 17 in in IN cord-000238-om92cx5q 327 18 basic basic JJ cord-000238-om92cx5q 327 19 science science NN cord-000238-om92cx5q 327 20 and and CC cord-000238-om92cx5q 327 21 biomedicine biomedicine NN cord-000238-om92cx5q 327 22 to to TO cord-000238-om92cx5q 327 23 consider consider VB cord-000238-om92cx5q 327 24 the the DT cord-000238-om92cx5q 327 25 potential potential JJ cord-000238-om92cx5q 327 26 importance importance NN cord-000238-om92cx5q 327 27 of of IN cord-000238-om92cx5q 327 28 genetic genetic JJ cord-000238-om92cx5q 327 29 and and CC cord-000238-om92cx5q 327 30 environmental environmental JJ cord-000238-om92cx5q 327 31 robustness robustness NN cord-000238-om92cx5q 327 32 in in IN cord-000238-om92cx5q 327 33 a a DT cord-000238-om92cx5q 327 34 great great JJ cord-000238-om92cx5q 327 35 variety variety NN cord-000238-om92cx5q 327 36 of of IN cord-000238-om92cx5q 327 37 biological biological JJ cord-000238-om92cx5q 327 38 systems system NNS cord-000238-om92cx5q 327 39 . . . cord-000238-om92cx5q 328 1 With with IN cord-000238-om92cx5q 328 2 this this DT cord-000238-om92cx5q 328 3 impetus impetus NN cord-000238-om92cx5q 328 4 , , , cord-000238-om92cx5q 328 5 we -PRON- PRP cord-000238-om92cx5q 328 6 may may MD cord-000238-om92cx5q 328 7 amass amass VB cord-000238-om92cx5q 328 8 enough enough JJ cord-000238-om92cx5q 328 9 empirical empirical JJ cord-000238-om92cx5q 328 10 data datum NNS cord-000238-om92cx5q 328 11 to to TO cord-000238-om92cx5q 328 12 help help VB cord-000238-om92cx5q 328 13 bridge bridge VB cord-000238-om92cx5q 328 14 the the DT cord-000238-om92cx5q 328 15 intellectual intellectual JJ cord-000238-om92cx5q 328 16 gap gap NN cord-000238-om92cx5q 328 17 separating separate VBG cord-000238-om92cx5q 328 18 abundant abundant JJ cord-000238-om92cx5q 328 19 theory theory NN cord-000238-om92cx5q 328 20 on on IN cord-000238-om92cx5q 328 21 robustness robustness NN cord-000238-om92cx5q 328 22 evolution evolution NN cord-000238-om92cx5q 328 23 and and CC cord-000238-om92cx5q 328 24 application application NN cord-000238-om92cx5q 328 25 of of IN cord-000238-om92cx5q 328 26 this this DT cord-000238-om92cx5q 328 27 thinking thinking NN cord-000238-om92cx5q 328 28 to to IN cord-000238-om92cx5q 328 29 applied apply VBN cord-000238-om92cx5q 328 30 problems problem NNS cord-000238-om92cx5q 328 31 in in IN cord-000238-om92cx5q 328 32 biomedicine biomedicine NN cord-000238-om92cx5q 328 33 and and CC cord-000238-om92cx5q 328 34 public public JJ cord-000238-om92cx5q 328 35 health health NN cord-000238-om92cx5q 328 36 . . . cord-000238-om92cx5q 329 1 UNCF UNCF NNP cord-000238-om92cx5q 329 2 - - HYPH cord-000238-om92cx5q 329 3 Merck Merck NNP cord-000238-om92cx5q 329 4 and and CC cord-000238-om92cx5q 329 5 by by IN cord-000238-om92cx5q 329 6 the the DT cord-000238-om92cx5q 329 7 National National NNP cord-000238-om92cx5q 329 8 Institutes Institutes NNPS cord-000238-om92cx5q 329 9 of of IN cord-000238-om92cx5q 329 10 Health Health NNP cord-000238-om92cx5q 329 11 training training NN cord-000238-om92cx5q 330 1 ͑Grant ͑Grant . cord-000238-om92cx5q 331 1 No no UH cord-000238-om92cx5q 331 2 . . . cord-000238-om92cx5q 332 1 T32GM07205͒ T32GM07205͒ NNP cord-000238-om92cx5q 333 1 Evolution evolution NN cord-000238-om92cx5q 333 2 ͑Lawrence ͑lawrence NN cord-000238-om92cx5q 333 3 Bacteriophage bacteriophage NN cord-000238-om92cx5q 333 4 Ecology ecology NN cord-000238-om92cx5q 333 5 : : : cord-000238-om92cx5q 333 6 Population population NN cord-000238-om92cx5q 333 7 Growth Growth NNP cord-000238-om92cx5q 333 8 , , , cord-000238-om92cx5q 333 9 Evolution evolution NN cord-000238-om92cx5q 333 10 , , , cord-000238-om92cx5q 333 11 and and CC cord-000238-om92cx5q 333 12 Impact impact NN cord-000238-om92cx5q 333 13 of of IN cord-000238-om92cx5q 333 14 Bacterial bacterial JJ cord-000238-om92cx5q 333 15 Viruses Viruses NNPS cord-000238-om92cx5q 333 16 Role role NN cord-000238-om92cx5q 333 17 of of IN cord-000238-om92cx5q 333 18 evolved evolve VBN cord-000238-om92cx5q 333 19 host host NN cord-000238-om92cx5q 333 20 breadth breadth NN cord-000238-om92cx5q 333 21 in in IN cord-000238-om92cx5q 333 22 the the DT cord-000238-om92cx5q 333 23 initial initial JJ cord-000238-om92cx5q 333 24 emergence emergence NN cord-000238-om92cx5q 333 25 of of IN cord-000238-om92cx5q 333 26 an an DT cord-000238-om92cx5q 333 27 RNA RNA NNP cord-000238-om92cx5q 333 28 virus virus NN cord-000238-om92cx5q 333 29 Evolution evolution NN cord-000238-om92cx5q 333 30 ͑Lawrence ͑Lawrence NNP cord-000238-om92cx5q 333 31 , , , cord-000238-om92cx5q 333 32 Kans.͒ Kans.͒ NNP cord-000238-om92cx5q 333 33 48 48 CD cord-000238-om92cx5q 334 1 We -PRON- PRP cord-000238-om92cx5q 334 2 thank thank VBP cord-000238-om92cx5q 334 3 D. D. NNP cord-000238-om92cx5q 334 4 Fish Fish NNP cord-000238-om92cx5q 334 5 , , , cord-000238-om92cx5q 334 6 A. A. NNP cord-000238-om92cx5q 334 7 Galvani Galvani NNP cord-000238-om92cx5q 334 8 , , , cord-000238-om92cx5q 334 9 B. B. NNP cord-000238-om92cx5q 334 10 Lindenbach Lindenbach NNP cord-000238-om92cx5q 334 11 , , , cord-000238-om92cx5q 334 12 E. E. NNP cord-000238-om92cx5q 334 13 Vrba Vrba NNP cord-000238-om92cx5q 334 14 , , , cord-000238-om92cx5q 334 15 G. G. NNP cord-000238-om92cx5q 334 16 Wagner Wagner NNP cord-000238-om92cx5q 334 17 , , , cord-000238-om92cx5q 334 18 and and CC cord-000238-om92cx5q 334 19 the the DT cord-000238-om92cx5q 334 20 Turner Turner NNP cord-000238-om92cx5q 334 21 laboratory laboratory NN cord-000238-om92cx5q 334 22 group group NN cord-000238-om92cx5q 334 23 for for IN cord-000238-om92cx5q 334 24 helpful helpful JJ cord-000238-om92cx5q 334 25 comments comment NNS cord-000238-om92cx5q 334 26 and and CC cord-000238-om92cx5q 334 27 discussion discussion NN cord-000238-om92cx5q 334 28 . . . cord-000238-om92cx5q 335 1 This this DT cord-000238-om92cx5q 335 2 work work NN cord-000238-om92cx5q 335 3 was be VBD cord-000238-om92cx5q 335 4 partially partially RB cord-000238-om92cx5q 335 5 funded fund VBN cord-000238-om92cx5q 335 6 by by IN cord-000238-om92cx5q 335 7 a a DT cord-000238-om92cx5q 335 8 _SP