id	sid	tid	token	lemma	pos
cord-022053-idft1p6d	1	1	key	key	NN
cord-022053-idft1p6d	1	2	:	:	:
cord-022053-idft1p6d	1	3	cord-022053-idft1p6d	cord-022053-idft1p6d	ADD
cord-022053-idft1p6d	2	1	authors	author	NNS
cord-022053-idft1p6d	2	2	:	:	:
cord-022053-idft1p6d	2	3	Pecora	Pecora	NNP
cord-022053-idft1p6d	2	4	,	,	,
cord-022053-idft1p6d	2	5	Nicole	Nicole	NNP
cord-022053-idft1p6d	2	6	;	;	:
cord-022053-idft1p6d	2	7	Milner	Milner	NNP
cord-022053-idft1p6d	2	8	,	,	,
cord-022053-idft1p6d	2	9	Danny	Danny	NNP
cord-022053-idft1p6d	2	10	A.	a.	NN
cord-022053-idft1p6d	2	11	title	title	NN
cord-022053-idft1p6d	2	12	:	:	:
cord-022053-idft1p6d	2	13	New	New	NNP
cord-022053-idft1p6d	2	14	Technologies	Technologies	NNPS
cord-022053-idft1p6d	2	15	for	for	IN
cord-022053-idft1p6d	2	16	the	the	DT
cord-022053-idft1p6d	2	17	Diagnosis	Diagnosis	NNP
cord-022053-idft1p6d	2	18	of	of	IN
cord-022053-idft1p6d	2	19	Infection	Infection	NNP
cord-022053-idft1p6d	2	20	date	date	NN
cord-022053-idft1p6d	2	21	:	:	:
cord-022053-idft1p6d	2	22	2017	2017	CD
cord-022053-idft1p6d	2	23	-	-	HYPH
cord-022053-idft1p6d	2	24	07	07	CD
cord-022053-idft1p6d	2	25	-	-	SYM
cord-022053-idft1p6d	2	26	21	21	CD
cord-022053-idft1p6d	2	27	journal	journal	NN
cord-022053-idft1p6d	2	28	:	:	:
cord-022053-idft1p6d	2	29	Diagnostic	Diagnostic	NNP
cord-022053-idft1p6d	2	30	Pathology	Pathology	NNP
cord-022053-idft1p6d	2	31	of	of	IN
cord-022053-idft1p6d	2	32	Infectious	Infectious	NNP
cord-022053-idft1p6d	2	33	Disease	Disease	NNP
cord-022053-idft1p6d	2	34	DOI	DOI	NNP
cord-022053-idft1p6d	2	35	:	:	:
cord-022053-idft1p6d	3	1	10.1016	10.1016	CD
cord-022053-idft1p6d	3	2	/	/	SYM
cord-022053-idft1p6d	3	3	b978	b978	NNP
cord-022053-idft1p6d	3	4	-	-	HYPH
cord-022053-idft1p6d	3	5	0	0	CD
cord-022053-idft1p6d	3	6	-	-	HYPH
cord-022053-idft1p6d	3	7	323	323	CD
cord-022053-idft1p6d	3	8	-	-	HYPH
cord-022053-idft1p6d	3	9	44585	44585	CD
cord-022053-idft1p6d	3	10	-	-	HYPH
cord-022053-idft1p6d	3	11	6.00006	6.00006	CD
cord-022053-idft1p6d	3	12	-	-	SYM
cord-022053-idft1p6d	3	13	0	0	CD
cord-022053-idft1p6d	3	14	sha	sha	NN
cord-022053-idft1p6d	3	15	:	:	:
cord-022053-idft1p6d	3	16	e6d4a58ec347043bf1de03ce82f2a0c93371be18	e6d4a58ec347043bf1de03ce82f2a0c93371be18	.
cord-022053-idft1p6d	4	1	doc_id	doc_id	CD
cord-022053-idft1p6d	4	2	:	:	:
cord-022053-idft1p6d	5	1	22053	22053	CD
cord-022053-idft1p6d	5	2	cord_uid	cord_uid	NNS
cord-022053-idft1p6d	5	3	:	:	:
cord-022053-idft1p6d	6	1	idft1p6d	idft1p6d	NNP
cord-022053-idft1p6d	7	1	nan	nan	NNP
cord-022053-idft1p6d	7	2	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	7	3	(	(	-LRB-
cord-022053-idft1p6d	7	4	BioFire	BioFire	NNP
cord-022053-idft1p6d	7	5	/	/	SYM
cord-022053-idft1p6d	7	6	BioMérieux	BioMérieux	NNP
cord-022053-idft1p6d	7	7	)	)	-RRB-
cord-022053-idft1p6d	8	1	BD	BD	NNP
cord-022053-idft1p6d	8	2	Max	Max	NNP
cord-022053-idft1p6d	8	3	(	(	-LRB-
cord-022053-idft1p6d	8	4	BD	BD	NNP
cord-022053-idft1p6d	8	5	Diagnostics	Diagnostics	NNP
cord-022053-idft1p6d	8	6	)	)	-RRB-
cord-022053-idft1p6d	9	1	Luminex	Luminex	NNP
cord-022053-idft1p6d	9	2	Next	Next	NNP
cord-022053-idft1p6d	9	3	-	-	HYPH
cord-022053-idft1p6d	9	4	Generation	Generation	NNP
cord-022053-idft1p6d	9	5	Sequencing	Sequencing	NNP
cord-022053-idft1p6d	9	6	Conclusion	Conclusion	NNP
cord-022053-idft1p6d	9	7	T	t	NN
cord-022053-idft1p6d	9	8	he	-PRON-	PRP
cord-022053-idft1p6d	10	1	clinical	clinical	JJ
cord-022053-idft1p6d	10	2	microbiology	microbiology	NN
cord-022053-idft1p6d	10	3	laboratory	laboratory	NN
cord-022053-idft1p6d	10	4	is	be	VBZ
cord-022053-idft1p6d	10	5	constantly	constantly	RB
cord-022053-idft1p6d	10	6	evolving	evolve	VBG
cord-022053-idft1p6d	10	7	and	and	CC
cord-022053-idft1p6d	10	8	progressing	progress	VBG
cord-022053-idft1p6d	10	9	.	.	.
cord-022053-idft1p6d	11	1	New	new	JJ
cord-022053-idft1p6d	11	2	technologies	technology	NNS
cord-022053-idft1p6d	11	3	have	have	VBP
cord-022053-idft1p6d	11	4	revolutionized	revolutionize	VBN
cord-022053-idft1p6d	11	5	the	the	DT
cord-022053-idft1p6d	11	6	characterization	characterization	NN
cord-022053-idft1p6d	11	7	and	and	CC
cord-022053-idft1p6d	11	8	diagnosis	diagnosis	NN
cord-022053-idft1p6d	11	9	of	of	IN
cord-022053-idft1p6d	11	10	pathogens	pathogen	NNS
cord-022053-idft1p6d	11	11	.	.	.
cord-022053-idft1p6d	12	1	The	the	DT
cord-022053-idft1p6d	12	2	purpose	purpose	NN
cord-022053-idft1p6d	12	3	of	of	IN
cord-022053-idft1p6d	12	4	this	this	DT
cord-022053-idft1p6d	12	5	chapter	chapter	NN
cord-022053-idft1p6d	12	6	is	be	VBZ
cord-022053-idft1p6d	12	7	to	to	TO
cord-022053-idft1p6d	12	8	review	review	VB
cord-022053-idft1p6d	12	9	the	the	DT
cord-022053-idft1p6d	12	10	features	feature	NNS
cord-022053-idft1p6d	12	11	,	,	,
cord-022053-idft1p6d	12	12	benefits	benefit	NNS
cord-022053-idft1p6d	12	13	,	,	,
cord-022053-idft1p6d	12	14	and	and	CC
cord-022053-idft1p6d	12	15	limitations	limitation	NNS
cord-022053-idft1p6d	12	16	of	of	IN
cord-022053-idft1p6d	12	17	some	some	DT
cord-022053-idft1p6d	12	18	of	of	IN
cord-022053-idft1p6d	12	19	the	the	DT
cord-022053-idft1p6d	12	20	key	key	JJ
cord-022053-idft1p6d	12	21	new	new	JJ
cord-022053-idft1p6d	12	22	methodologies	methodology	NNS
cord-022053-idft1p6d	12	23	in	in	IN
cord-022053-idft1p6d	12	24	infectious	infectious	JJ
cord-022053-idft1p6d	12	25	disease	disease	NN
cord-022053-idft1p6d	12	26	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	12	27	.	.	.
cord-022053-idft1p6d	13	1	The	the	DT
cord-022053-idft1p6d	13	2	chapter	chapter	NN
cord-022053-idft1p6d	13	3	will	will	MD
cord-022053-idft1p6d	13	4	be	be	VB
cord-022053-idft1p6d	13	5	organized	organize	VBN
cord-022053-idft1p6d	13	6	by	by	IN
cord-022053-idft1p6d	13	7	technology	technology	NN
cord-022053-idft1p6d	13	8	.	.	.
cord-022053-idft1p6d	14	1	New	new	JJ
cord-022053-idft1p6d	14	2	technologies	technology	NNS
cord-022053-idft1p6d	14	3	have	have	VBP
cord-022053-idft1p6d	14	4	the	the	DT
cord-022053-idft1p6d	14	5	most	most	JJS
cord-022053-idft1p6d	14	6	impact	impact	NN
cord-022053-idft1p6d	14	7	in	in	IN
cord-022053-idft1p6d	14	8	the	the	DT
cord-022053-idft1p6d	14	9	fields	field	NNS
cord-022053-idft1p6d	14	10	of	of	IN
cord-022053-idft1p6d	14	11	bacteriology	bacteriology	NN
cord-022053-idft1p6d	14	12	and	and	CC
cord-022053-idft1p6d	14	13	virology	virology	NN
cord-022053-idft1p6d	14	14	,	,	,
cord-022053-idft1p6d	14	15	but	but	CC
cord-022053-idft1p6d	14	16	there	there	EX
cord-022053-idft1p6d	14	17	are	be	VBP
cord-022053-idft1p6d	14	18	also	also	RB
cord-022053-idft1p6d	14	19	promising	promise	VBG
cord-022053-idft1p6d	14	20	new	new	JJ
cord-022053-idft1p6d	14	21	developments	development	NNS
cord-022053-idft1p6d	14	22	in	in	IN
cord-022053-idft1p6d	14	23	mycology	mycology	NN
cord-022053-idft1p6d	14	24	and	and	CC
cord-022053-idft1p6d	14	25	parasitology	parasitology	NN
cord-022053-idft1p6d	14	26	.	.	.
cord-022053-idft1p6d	15	1	The	the	DT
cord-022053-idft1p6d	15	2	mainstay	mainstay	NN
cord-022053-idft1p6d	15	3	of	of	IN
cord-022053-idft1p6d	15	4	bacterial	bacterial	JJ
cord-022053-idft1p6d	15	5	and	and	CC
cord-022053-idft1p6d	15	6	mycologic	mycologic	JJ
cord-022053-idft1p6d	15	7	diagnosis	diagnosis	NN
cord-022053-idft1p6d	15	8	continues	continue	VBZ
cord-022053-idft1p6d	15	9	to	to	TO
cord-022053-idft1p6d	15	10	be	be	VB
cord-022053-idft1p6d	15	11	culture	culture	NN
cord-022053-idft1p6d	15	12	by	by	IN
cord-022053-idft1p6d	15	13	traditional	traditional	JJ
cord-022053-idft1p6d	15	14	techniques	technique	NNS
cord-022053-idft1p6d	15	15	,	,	,
cord-022053-idft1p6d	15	16	although	although	IN
cord-022053-idft1p6d	15	17	increasingly	increasingly	RB
cord-022053-idft1p6d	15	18	these	these	DT
cord-022053-idft1p6d	15	19	are	be	VBP
cord-022053-idft1p6d	15	20	automated	automate	VBN
cord-022053-idft1p6d	15	21	(	(	-LRB-
cord-022053-idft1p6d	15	22	Fig	fig	NN
cord-022053-idft1p6d	15	23	.	.	.
cord-022053-idft1p6d	15	24	6.1	6.1	CD
cord-022053-idft1p6d	15	25	)	)	-RRB-
cord-022053-idft1p6d	15	26	.	.	.
cord-022053-idft1p6d	16	1	After	after	IN
cord-022053-idft1p6d	16	2	an	an	DT
cord-022053-idft1p6d	16	3	organism	organism	NN
cord-022053-idft1p6d	16	4	is	be	VBZ
cord-022053-idft1p6d	16	5	isolated	isolate	VBN
cord-022053-idft1p6d	16	6	,	,	,
cord-022053-idft1p6d	16	7	however	however	RB
cord-022053-idft1p6d	16	8	,	,	,
cord-022053-idft1p6d	16	9	a	a	DT
cord-022053-idft1p6d	16	10	host	host	NN
cord-022053-idft1p6d	16	11	of	of	IN
cord-022053-idft1p6d	16	12	newer	new	JJR
cord-022053-idft1p6d	16	13	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	16	14	have	have	VBP
cord-022053-idft1p6d	16	15	enhanced	enhance	VBN
cord-022053-idft1p6d	16	16	,	,	,
cord-022053-idft1p6d	16	17	and	and	CC
cord-022053-idft1p6d	16	18	in	in	IN
cord-022053-idft1p6d	16	19	some	some	DT
cord-022053-idft1p6d	16	20	cases	case	NNS
cord-022053-idft1p6d	16	21	replaced	replace	VBN
cord-022053-idft1p6d	16	22	,	,	,
cord-022053-idft1p6d	16	23	the	the	DT
cord-022053-idft1p6d	16	24	biochemical	biochemical	JJ
cord-022053-idft1p6d	16	25	test	test	NN
cord-022053-idft1p6d	16	26	algorithm	algorithm	NN
cord-022053-idft1p6d	16	27	that	that	WDT
cord-022053-idft1p6d	16	28	has	have	VBZ
cord-022053-idft1p6d	16	29	historically	historically	RB
cord-022053-idft1p6d	16	30	defined	define	VBN
cord-022053-idft1p6d	16	31	clinical	clinical	JJ
cord-022053-idft1p6d	16	32	bacteriology	bacteriology	NN
cord-022053-idft1p6d	16	33	.	.	.
cord-022053-idft1p6d	17	1	The	the	DT
cord-022053-idft1p6d	17	2	advent	advent	NN
cord-022053-idft1p6d	17	3	of	of	IN
cord-022053-idft1p6d	17	4	matrix	matrix	NN
cord-022053-idft1p6d	17	5	-	-	HYPH
cord-022053-idft1p6d	17	6	assisted	assist	VBN
cord-022053-idft1p6d	17	7	laser	laser	NN
cord-022053-idft1p6d	17	8	desorption	desorption	NN
cord-022053-idft1p6d	17	9	time	time	NN
cord-022053-idft1p6d	17	10	of	of	IN
cord-022053-idft1p6d	17	11	flight	flight	NN
cord-022053-idft1p6d	17	12	(	(	-LRB-
cord-022053-idft1p6d	17	13	MALDI	MALDI	NNP
cord-022053-idft1p6d	17	14	-	-	HYPH
cord-022053-idft1p6d	17	15	TOF	TOF	NNP
cord-022053-idft1p6d	17	16	)	)	-RRB-
cord-022053-idft1p6d	17	17	mass	mass	NN
cord-022053-idft1p6d	17	18	spectrometry	spectrometry	NN
cord-022053-idft1p6d	17	19	is	be	VBZ
cord-022053-idft1p6d	17	20	one	one	CD
cord-022053-idft1p6d	17	21	of	of	IN
cord-022053-idft1p6d	17	22	the	the	DT
cord-022053-idft1p6d	17	23	main	main	JJ
cord-022053-idft1p6d	17	24	forces	force	NNS
cord-022053-idft1p6d	17	25	behind	behind	IN
cord-022053-idft1p6d	17	26	this	this	DT
cord-022053-idft1p6d	17	27	shift	shift	NN
cord-022053-idft1p6d	17	28	,	,	,
cord-022053-idft1p6d	17	29	allowing	allow	VBG
cord-022053-idft1p6d	17	30	a	a	DT
cord-022053-idft1p6d	17	31	cultured	cultured	JJ
cord-022053-idft1p6d	17	32	organism	organism	NN
cord-022053-idft1p6d	17	33	to	to	TO
cord-022053-idft1p6d	17	34	be	be	VB
cord-022053-idft1p6d	17	35	identified	identify	VBN
cord-022053-idft1p6d	17	36	in	in	IN
cord-022053-idft1p6d	17	37	minutes	minute	NNS
cord-022053-idft1p6d	17	38	instead	instead	RB
cord-022053-idft1p6d	17	39	of	of	IN
cord-022053-idft1p6d	17	40	hours	hour	NNS
cord-022053-idft1p6d	17	41	to	to	IN
cord-022053-idft1p6d	17	42	days	day	NNS
cord-022053-idft1p6d	17	43	or	or	CC
cord-022053-idft1p6d	17	44	even	even	RB
cord-022053-idft1p6d	17	45	weeks	week	NNS
cord-022053-idft1p6d	17	46	in	in	IN
cord-022053-idft1p6d	17	47	the	the	DT
cord-022053-idft1p6d	17	48	case	case	NN
cord-022053-idft1p6d	17	49	of	of	IN
cord-022053-idft1p6d	17	50	very	very	RB
cord-022053-idft1p6d	17	51	slow	slow	RB
cord-022053-idft1p6d	17	52	-	-	HYPH
cord-022053-idft1p6d	17	53	growing	grow	VBG
cord-022053-idft1p6d	17	54	organisms	organism	NNS
cord-022053-idft1p6d	17	55	,	,	,
cord-022053-idft1p6d	17	56	such	such	JJ
cord-022053-idft1p6d	17	57	as	as	IN
cord-022053-idft1p6d	17	58	mycobacteria	mycobacterium	NNS
cord-022053-idft1p6d	17	59	.	.	.
cord-022053-idft1p6d	18	1	Although	although	IN
cord-022053-idft1p6d	18	2	still	still	RB
cord-022053-idft1p6d	18	3	not	not	RB
cord-022053-idft1p6d	18	4	in	in	IN
cord-022053-idft1p6d	18	5	routine	routine	JJ
cord-022053-idft1p6d	18	6	clinical	clinical	JJ
cord-022053-idft1p6d	18	7	use	use	NN
cord-022053-idft1p6d	18	8	,	,	,
cord-022053-idft1p6d	18	9	the	the	DT
cord-022053-idft1p6d	18	10	application	application	NN
cord-022053-idft1p6d	18	11	of	of	IN
cord-022053-idft1p6d	18	12	MALDI	MALDI	NNP
cord-022053-idft1p6d	18	13	-	-	HYPH
cord-022053-idft1p6d	18	14	TOF	TOF	NNP
cord-022053-idft1p6d	18	15	to	to	TO
cord-022053-idft1p6d	18	16	direct	direct	JJ
cord-022053-idft1p6d	18	17	patient	patient	NN
cord-022053-idft1p6d	18	18	samples	sample	NNS
cord-022053-idft1p6d	18	19	,	,	,
cord-022053-idft1p6d	18	20	such	such	JJ
cord-022053-idft1p6d	18	21	as	as	IN
cord-022053-idft1p6d	18	22	blood	blood	NN
cord-022053-idft1p6d	18	23	and	and	CC
cord-022053-idft1p6d	18	24	urine	urine	NN
cord-022053-idft1p6d	18	25	,	,	,
cord-022053-idft1p6d	18	26	and	and	CC
cord-022053-idft1p6d	18	27	applications	application	NNS
cord-022053-idft1p6d	18	28	such	such	JJ
cord-022053-idft1p6d	18	29	as	as	IN
cord-022053-idft1p6d	18	30	antibiotic	antibiotic	JJ
cord-022053-idft1p6d	18	31	resistance	resistance	NN
cord-022053-idft1p6d	18	32	are	be	VBP
cord-022053-idft1p6d	18	33	exciting	exciting	JJ
cord-022053-idft1p6d	18	34	developments	development	NNS
cord-022053-idft1p6d	18	35	.	.	.
cord-022053-idft1p6d	19	1	Beyond	beyond	IN
cord-022053-idft1p6d	19	2	bacteria	bacteria	NNS
cord-022053-idft1p6d	19	3	,	,	,
cord-022053-idft1p6d	19	4	MALDI	MALDI	NNP
cord-022053-idft1p6d	19	5	-	-	HYPH
cord-022053-idft1p6d	19	6	TOF	TOF	NNP
cord-022053-idft1p6d	19	7	is	be	VBZ
cord-022053-idft1p6d	19	8	becoming	become	VBG
cord-022053-idft1p6d	19	9	established	establish	VBN
cord-022053-idft1p6d	19	10	for	for	IN
cord-022053-idft1p6d	19	11	the	the	DT
cord-022053-idft1p6d	19	12	identification	identification	NN
cord-022053-idft1p6d	19	13	of	of	IN
cord-022053-idft1p6d	19	14	yeasts	yeast	NNS
cord-022053-idft1p6d	19	15	and	and	CC
cord-022053-idft1p6d	19	16	,	,	,
cord-022053-idft1p6d	19	17	with	with	IN
cord-022053-idft1p6d	19	18	the	the	DT
cord-022053-idft1p6d	19	19	development	development	NN
cord-022053-idft1p6d	19	20	of	of	IN
cord-022053-idft1p6d	19	21	more	more	RBR
cord-022053-idft1p6d	19	22	extensive	extensive	JJ
cord-022053-idft1p6d	19	23	and	and	CC
cord-022053-idft1p6d	19	24	higher	high	JJR
cord-022053-idft1p6d	19	25	quality	quality	NN
cord-022053-idft1p6d	19	26	libraries	library	NNS
cord-022053-idft1p6d	19	27	,	,	,
cord-022053-idft1p6d	19	28	is	be	VBZ
cord-022053-idft1p6d	19	29	expected	expect	VBN
cord-022053-idft1p6d	19	30	to	to	TO
cord-022053-idft1p6d	19	31	also	also	RB
cord-022053-idft1p6d	19	32	do	do	VB
cord-022053-idft1p6d	19	33	so	so	RB
cord-022053-idft1p6d	19	34	for	for	IN
cord-022053-idft1p6d	19	35	other	other	JJ
cord-022053-idft1p6d	19	36	fungi	fungus	NNS
cord-022053-idft1p6d	19	37	.	.	.
cord-022053-idft1p6d	20	1	Nucleic	nucleic	JJ
cord-022053-idft1p6d	20	2	acid	acid	NN
cord-022053-idft1p6d	20	3	-	-	HYPH
cord-022053-idft1p6d	20	4	based	base	VBN
cord-022053-idft1p6d	20	5	technologies	technology	NNS
cord-022053-idft1p6d	20	6	have	have	VBP
cord-022053-idft1p6d	20	7	also	also	RB
cord-022053-idft1p6d	20	8	had	have	VBN
cord-022053-idft1p6d	20	9	a	a	DT
cord-022053-idft1p6d	20	10	big	big	JJ
cord-022053-idft1p6d	20	11	impact	impact	NN
cord-022053-idft1p6d	20	12	.	.	.
cord-022053-idft1p6d	21	1	In	in	IN
cord-022053-idft1p6d	21	2	particular	particular	JJ
cord-022053-idft1p6d	21	3	,	,	,
cord-022053-idft1p6d	21	4	there	there	EX
cord-022053-idft1p6d	21	5	are	be	VBP
cord-022053-idft1p6d	21	6	a	a	DT
cord-022053-idft1p6d	21	7	growing	grow	VBG
cord-022053-idft1p6d	21	8	number	number	NN
cord-022053-idft1p6d	21	9	of	of	IN
cord-022053-idft1p6d	21	10	test	test	NN
cord-022053-idft1p6d	21	11	platforms	platform	NNS
cord-022053-idft1p6d	21	12	that	that	WDT
cord-022053-idft1p6d	21	13	provide	provide	VBP
cord-022053-idft1p6d	21	14	rapid	rapid	JJ
cord-022053-idft1p6d	21	15	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	21	16	directly	directly	RB
cord-022053-idft1p6d	21	17	from	from	IN
cord-022053-idft1p6d	21	18	primary	primary	JJ
cord-022053-idft1p6d	21	19	specimens	specimen	NNS
cord-022053-idft1p6d	21	20	.	.	.
cord-022053-idft1p6d	22	1	Many	many	JJ
cord-022053-idft1p6d	22	2	of	of	IN
cord-022053-idft1p6d	22	3	these	these	DT
cord-022053-idft1p6d	22	4	are	be	VBP
cord-022053-idft1p6d	22	5	multiplexed	multiplexe	VBN
cord-022053-idft1p6d	22	6	to	to	TO
cord-022053-idft1p6d	22	7	look	look	VB
cord-022053-idft1p6d	22	8	at	at	IN
cord-022053-idft1p6d	22	9	several	several	JJ
cord-022053-idft1p6d	22	10	pathogens	pathogen	NNS
cord-022053-idft1p6d	22	11	at	at	IN
cord-022053-idft1p6d	22	12	one	one	CD
cord-022053-idft1p6d	22	13	time	time	NN
cord-022053-idft1p6d	22	14	.	.	.
cord-022053-idft1p6d	23	1	The	the	DT
cord-022053-idft1p6d	23	2	sequencing	sequencing	NN
cord-022053-idft1p6d	23	3	of	of	IN
cord-022053-idft1p6d	23	4	the	the	DT
cord-022053-idft1p6d	23	5	regions	region	NNS
cord-022053-idft1p6d	23	6	of	of	IN
cord-022053-idft1p6d	23	7	ribosomal	ribosomal	JJ
cord-022053-idft1p6d	23	8	RNA	RNA	NNP
cord-022053-idft1p6d	23	9	(	(	-LRB-
cord-022053-idft1p6d	23	10	rRNA	rRNA	NNP
cord-022053-idft1p6d	23	11	)	)	-RRB-
cord-022053-idft1p6d	23	12	,	,	,
cord-022053-idft1p6d	23	13	such	such	JJ
cord-022053-idft1p6d	23	14	as	as	IN
cord-022053-idft1p6d	23	15	the	the	DT
cord-022053-idft1p6d	23	16	16S	16S	NNP
cord-022053-idft1p6d	23	17	rRNA	rrna	NN
cord-022053-idft1p6d	23	18	gene	gene	NN
cord-022053-idft1p6d	23	19	in	in	IN
cord-022053-idft1p6d	23	20	bacteria	bacteria	NNS
cord-022053-idft1p6d	23	21	,	,	,
cord-022053-idft1p6d	23	22	already	already	RB
cord-022053-idft1p6d	23	23	considered	consider	VBN
cord-022053-idft1p6d	23	24	the	the	DT
cord-022053-idft1p6d	23	25	gold	gold	JJ
cord-022053-idft1p6d	23	26	standard	standard	NN
cord-022053-idft1p6d	23	27	for	for	IN
cord-022053-idft1p6d	23	28	bacterial	bacterial	JJ
cord-022053-idft1p6d	23	29	identification	identification	NN
cord-022053-idft1p6d	23	30	,	,	,
cord-022053-idft1p6d	23	31	is	be	VBZ
cord-022053-idft1p6d	23	32	entering	enter	VBG
cord-022053-idft1p6d	23	33	more	more	JJR
cord-022053-idft1p6d	23	34	and	and	CC
cord-022053-idft1p6d	23	35	more	more	RBR
cord-022053-idft1p6d	23	36	into	into	IN
cord-022053-idft1p6d	23	37	clinical	clinical	JJ
cord-022053-idft1p6d	23	38	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	23	39	(	(	-LRB-
cord-022053-idft1p6d	23	40	Fig	fig	NN
cord-022053-idft1p6d	23	41	.	.	.
cord-022053-idft1p6d	23	42	6.2	6.2	CD
cord-022053-idft1p6d	23	43	)	)	-RRB-
cord-022053-idft1p6d	23	44	.	.	.
cord-022053-idft1p6d	24	1	Similarly	similarly	RB
cord-022053-idft1p6d	24	2	,	,	,
cord-022053-idft1p6d	24	3	the	the	DT
cord-022053-idft1p6d	24	4	routine	routine	JJ
cord-022053-idft1p6d	24	5	sequencing	sequencing	NN
cord-022053-idft1p6d	24	6	of	of	IN
cord-022053-idft1p6d	24	7	the	the	DT
cord-022053-idft1p6d	24	8	intergenic	intergenic	JJ
cord-022053-idft1p6d	24	9	transcribed	transcribe	VBN
cord-022053-idft1p6d	24	10	spacer	spacer	NN
cord-022053-idft1p6d	24	11	(	(	-LRB-
cord-022053-idft1p6d	24	12	ITS	its	PRP$
cord-022053-idft1p6d	24	13	)	)	-RRB-
cord-022053-idft1p6d	24	14	and	and	CC
cord-022053-idft1p6d	24	15	28S	28S	NNP
cord-022053-idft1p6d	24	16	rRNA	rRNA	NNP
cord-022053-idft1p6d	24	17	regions	region	NNS
cord-022053-idft1p6d	24	18	in	in	IN
cord-022053-idft1p6d	24	19	fungi	fungus	NNS
cord-022053-idft1p6d	24	20	is	be	VBZ
cord-022053-idft1p6d	24	21	a	a	DT
cord-022053-idft1p6d	24	22	welcome	welcome	JJ
cord-022053-idft1p6d	24	23	addition	addition	NN
cord-022053-idft1p6d	24	24	to	to	IN
cord-022053-idft1p6d	24	25	current	current	JJ
cord-022053-idft1p6d	24	26	laborious	laborious	JJ
cord-022053-idft1p6d	24	27	and	and	CC
cord-022053-idft1p6d	24	28	morphology	morphology	NN
cord-022053-idft1p6d	24	29	-	-	HYPH
cord-022053-idft1p6d	24	30	heavy	heavy	JJ
cord-022053-idft1p6d	24	31	techniques	technique	NNS
cord-022053-idft1p6d	24	32	for	for	IN
cord-022053-idft1p6d	24	33	diagnosing	diagnose	VBG
cord-022053-idft1p6d	24	34	fungal	fungal	JJ
cord-022053-idft1p6d	24	35	illnesses	illness	NNS
cord-022053-idft1p6d	24	36	.	.	.
cord-022053-idft1p6d	25	1	The	the	DT
cord-022053-idft1p6d	25	2	entry	entry	NN
cord-022053-idft1p6d	25	3	of	of	IN
cord-022053-idft1p6d	25	4	next	next	JJ
cord-022053-idft1p6d	25	5	-	-	HYPH
cord-022053-idft1p6d	25	6	generation	generation	NN
cord-022053-idft1p6d	25	7	sequencing	sequencing	NN
cord-022053-idft1p6d	25	8	(	(	-LRB-
cord-022053-idft1p6d	25	9	NGS	NGS	NNP
cord-022053-idft1p6d	25	10	)	)	-RRB-
cord-022053-idft1p6d	25	11	into	into	IN
cord-022053-idft1p6d	25	12	clinical	clinical	JJ
cord-022053-idft1p6d	25	13	microbiology	microbiology	NN
cord-022053-idft1p6d	25	14	has	have	VBZ
cord-022053-idft1p6d	25	15	also	also	RB
cord-022053-idft1p6d	25	16	had	have	VBN
cord-022053-idft1p6d	25	17	a	a	DT
cord-022053-idft1p6d	25	18	dramatic	dramatic	JJ
cord-022053-idft1p6d	25	19	effect	effect	NN
cord-022053-idft1p6d	25	20	on	on	IN
cord-022053-idft1p6d	25	21	both	both	CC
cord-022053-idft1p6d	25	22	the	the	DT
cord-022053-idft1p6d	25	23	profiling	profiling	NN
cord-022053-idft1p6d	25	24	of	of	IN
cord-022053-idft1p6d	25	25	individual	individual	JJ
cord-022053-idft1p6d	25	26	specimens	specimen	NNS
cord-022053-idft1p6d	25	27	(	(	-LRB-
cord-022053-idft1p6d	25	28	i.e.	i.e.	FW
cord-022053-idft1p6d	25	29	,	,	,
cord-022053-idft1p6d	25	30	members	member	NNS
cord-022053-idft1p6d	25	31	of	of	IN
cord-022053-idft1p6d	25	32	a	a	DT
cord-022053-idft1p6d	25	33	potential	potential	JJ
cord-022053-idft1p6d	25	34	outbreak	outbreak	NN
cord-022053-idft1p6d	25	35	or	or	CC
cord-022053-idft1p6d	25	36	highly	highly	RB
cord-022053-idft1p6d	25	37	drug	drug	NN
cord-022053-idft1p6d	25	38	resistant	resistant	JJ
cord-022053-idft1p6d	25	39	strains	strain	NNS
cord-022053-idft1p6d	25	40	)	)	-RRB-
cord-022053-idft1p6d	25	41	as	as	RB
cord-022053-idft1p6d	25	42	well	well	RB
cord-022053-idft1p6d	25	43	as	as	IN
cord-022053-idft1p6d	25	44	communities	community	NNS
cord-022053-idft1p6d	25	45	(	(	-LRB-
cord-022053-idft1p6d	25	46	i.e.	i.e.	FW
cord-022053-idft1p6d	25	47	,	,	,
cord-022053-idft1p6d	25	48	microbiome	microbiome	NN
cord-022053-idft1p6d	25	49	analysis	analysis	NN
cord-022053-idft1p6d	25	50	in	in	IN
cord-022053-idft1p6d	25	51	health	health	NN
cord-022053-idft1p6d	25	52	and	and	CC
cord-022053-idft1p6d	25	53	disease	disease	NN
cord-022053-idft1p6d	25	54	)	)	-RRB-
cord-022053-idft1p6d	25	55	.	.	.
cord-022053-idft1p6d	26	1	Finally	finally	RB
cord-022053-idft1p6d	26	2	,	,	,
cord-022053-idft1p6d	26	3	the	the	DT
cord-022053-idft1p6d	26	4	emerging	emerge	VBG
cord-022053-idft1p6d	26	5	technology	technology	NN
cord-022053-idft1p6d	26	6	of	of	IN
cord-022053-idft1p6d	26	7	polymerase	polymerase	NN
cord-022053-idft1p6d	26	8	chain	chain	NN
cord-022053-idft1p6d	26	9	reaction	reaction	NN
cord-022053-idft1p6d	26	10	(	(	-LRB-
cord-022053-idft1p6d	26	11	PCR)-electrospray	pcr)-electrospray	JJ
cord-022053-idft1p6d	26	12	ionization	ionization	NN
cord-022053-idft1p6d	26	13	(	(	-LRB-
cord-022053-idft1p6d	26	14	ESI	ESI	NNP
cord-022053-idft1p6d	26	15	)	)	-RRB-
cord-022053-idft1p6d	26	16	mass	mass	NN
cord-022053-idft1p6d	26	17	spectrometry	spectrometry	NN
cord-022053-idft1p6d	26	18	holds	hold	VBZ
cord-022053-idft1p6d	26	19	great	great	JJ
cord-022053-idft1p6d	26	20	promise	promise	NN
cord-022053-idft1p6d	26	21	for	for	IN
cord-022053-idft1p6d	26	22	all	all	DT
cord-022053-idft1p6d	26	23	major	major	JJ
cord-022053-idft1p6d	26	24	phyla	phylum	NNS
cord-022053-idft1p6d	26	25	of	of	IN
cord-022053-idft1p6d	26	26	pathogens	pathogen	NNS
cord-022053-idft1p6d	26	27	.	.	.
cord-022053-idft1p6d	27	1	ITS	its	PRP$
cord-022053-idft1p6d	27	2	  	  	_SP
cord-022053-idft1p6d	27	3	ITS1	ITS1	NNP
cord-022053-idft1p6d	27	4	 	 	_SP
cord-022053-idft1p6d	28	1	ITS2	its2	NN
cord-022053-idft1p6d	28	2	  	  	_SP
cord-022053-idft1p6d	29	1	ITS5	ITS5	NNP
cord-022053-idft1p6d	29	2	 	 	_SP
cord-022053-idft1p6d	30	1	ITS1	ITS1	NNP
cord-022053-idft1p6d	30	2	 	 	_SP
cord-022053-idft1p6d	31	1	ITS2	ITS2	NNP
cord-022053-idft1p6d	31	2	 	 	_SP
cord-022053-idft1p6d	32	1	ITS3	ITS3	NNP
cord-022053-idft1p6d	32	2	 	 	_SP
cord-022053-idft1p6d	33	1	ITS4	ITS4	NNP
cord-022053-idft1p6d	33	2	 	 	_SP
cord-022053-idft1p6d	34	1	NL1	NL1	NNP
cord-022053-idft1p6d	34	2	 	 	_SP
cord-022053-idft1p6d	35	1	NL4	NL4	NNP
cord-022053-idft1p6d	35	2	  	  	_SP
cord-022053-idft1p6d	36	1	ITS1	ITS1	NNP
cord-022053-idft1p6d	36	2	 	 	_SP
cord-022053-idft1p6d	37	1	ITS2	its2	JJ
cord-022053-idft1p6d	37	2	 	 	_SP
cord-022053-idft1p6d	37	3	D1/	d1/	JJ
cord-022053-idft1p6d	37	4	testing	testing	NN
cord-022053-idft1p6d	37	5	.	.	.
cord-022053-idft1p6d	38	1	Immunohistochemistry	Immunohistochemistry	NNP
cord-022053-idft1p6d	38	2	(	(	-LRB-
cord-022053-idft1p6d	38	3	IHC	IHC	NNP
cord-022053-idft1p6d	38	4	)	)	-RRB-
cord-022053-idft1p6d	38	5	in	in	IN
cord-022053-idft1p6d	38	6	anatomic	anatomic	JJ
cord-022053-idft1p6d	38	7	pathology	pathology	NN
cord-022053-idft1p6d	38	8	is	be	VBZ
cord-022053-idft1p6d	38	9	based	base	VBN
cord-022053-idft1p6d	38	10	on	on	IN
cord-022053-idft1p6d	38	11	the	the	DT
cord-022053-idft1p6d	38	12	same	same	JJ
cord-022053-idft1p6d	38	13	principle	principle	NN
cord-022053-idft1p6d	38	14	as	as	IN
cord-022053-idft1p6d	38	15	these	these	DT
cord-022053-idft1p6d	38	16	rapid	rapid	JJ
cord-022053-idft1p6d	38	17	tests	test	NNS
cord-022053-idft1p6d	38	18	and	and	CC
cord-022053-idft1p6d	38	19	has	have	VBZ
cord-022053-idft1p6d	38	20	a	a	DT
cord-022053-idft1p6d	38	21	wide	wide	JJ
cord-022053-idft1p6d	38	22	range	range	NN
cord-022053-idft1p6d	38	23	of	of	IN
cord-022053-idft1p6d	38	24	uses	use	NNS
cord-022053-idft1p6d	38	25	for	for	IN
cord-022053-idft1p6d	38	26	the	the	DT
cord-022053-idft1p6d	38	27	detection	detection	NN
cord-022053-idft1p6d	38	28	and	and	CC
cord-022053-idft1p6d	38	29	sometimes	sometimes	RB
cord-022053-idft1p6d	38	30	speciation	speciation	NN
cord-022053-idft1p6d	38	31	of	of	IN
cord-022053-idft1p6d	38	32	organisms	organism	NNS
cord-022053-idft1p6d	38	33	in	in	IN
cord-022053-idft1p6d	38	34	formalin	formalin	NN
cord-022053-idft1p6d	38	35	-	-	HYPH
cord-022053-idft1p6d	38	36	fixed	fix	VBN
cord-022053-idft1p6d	38	37	,	,	,
cord-022053-idft1p6d	38	38	paraffin	paraffin	NN
cord-022053-idft1p6d	38	39	-	-	HYPH
cord-022053-idft1p6d	38	40	embedded	embed	VBN
cord-022053-idft1p6d	38	41	tissue	tissue	NN
cord-022053-idft1p6d	38	42	(	(	-LRB-
cord-022053-idft1p6d	38	43	FFPE	FFPE	NNP
cord-022053-idft1p6d	38	44	)	)	-RRB-
cord-022053-idft1p6d	38	45	sections	section	NNS
cord-022053-idft1p6d	38	46	.	.	.
cord-022053-idft1p6d	39	1	Organisms	organism	NNS
cord-022053-idft1p6d	39	2	commonly	commonly	RB
cord-022053-idft1p6d	39	3	identified	identify	VBD
cord-022053-idft1p6d	39	4	this	this	DT
cord-022053-idft1p6d	39	5	way	way	NN
cord-022053-idft1p6d	39	6	include	include	VBP
cord-022053-idft1p6d	39	7	spirochetes	spirochete	NNS
cord-022053-idft1p6d	39	8	,	,	,
cord-022053-idft1p6d	39	9	mycobacteria	mycobacterium	NNS
cord-022053-idft1p6d	39	10	,	,	,
cord-022053-idft1p6d	39	11	DNA	dna	NN
cord-022053-idft1p6d	39	12	viruses	virus	NNS
cord-022053-idft1p6d	39	13	,	,	,
cord-022053-idft1p6d	39	14	Aspergillus	aspergillus	NN
cord-022053-idft1p6d	39	15	,	,	,
cord-022053-idft1p6d	39	16	Candida	Candida	NNP
cord-022053-idft1p6d	39	17	,	,	,
cord-022053-idft1p6d	39	18	and	and	CC
cord-022053-idft1p6d	39	19	Toxoplasma	toxoplasma	NN
cord-022053-idft1p6d	39	20	,	,	,
cord-022053-idft1p6d	39	21	although	although	IN
cord-022053-idft1p6d	39	22	special	special	JJ
cord-022053-idft1p6d	39	23	reference	reference	NN
cord-022053-idft1p6d	39	24	laboratories	laboratory	NNS
cord-022053-idft1p6d	39	25	(	(	-LRB-
cord-022053-idft1p6d	39	26	e.g.	e.g.	RB
cord-022053-idft1p6d	39	27	,	,	,
cord-022053-idft1p6d	39	28	The	the	DT
cord-022053-idft1p6d	39	29	Infectious	Infectious	NNP
cord-022053-idft1p6d	39	30	Disease	Disease	NNP
cord-022053-idft1p6d	39	31	Pathology	Pathology	NNP
cord-022053-idft1p6d	39	32	Branch	Branch	NNP
cord-022053-idft1p6d	39	33	at	at	IN
cord-022053-idft1p6d	39	34	the	the	DT
cord-022053-idft1p6d	39	35	Centers	Centers	NNPS
cord-022053-idft1p6d	39	36	for	for	IN
cord-022053-idft1p6d	39	37	Disease	Disease	NNP
cord-022053-idft1p6d	39	38	Control	Control	NNP
cord-022053-idft1p6d	39	39	and	and	CC
cord-022053-idft1p6d	39	40	Prevention	Prevention	NNP
cord-022053-idft1p6d	39	41	)	)	-RRB-
cord-022053-idft1p6d	39	42	have	have	VBP
cord-022053-idft1p6d	39	43	a	a	DT
cord-022053-idft1p6d	39	44	wide	wide	JJ
cord-022053-idft1p6d	39	45	range	range	NN
cord-022053-idft1p6d	39	46	of	of	IN
cord-022053-idft1p6d	39	47	antibodies	antibody	NNS
cord-022053-idft1p6d	39	48	for	for	IN
cord-022053-idft1p6d	39	49	common	common	JJ
cord-022053-idft1p6d	39	50	to	to	IN
cord-022053-idft1p6d	39	51	exotic	exotic	JJ
cord-022053-idft1p6d	39	52	pathogens	pathogen	NNS
cord-022053-idft1p6d	39	53	for	for	IN
cord-022053-idft1p6d	39	54	tissue	tissue	NN
cord-022053-idft1p6d	39	55	confirmation	confirmation	NN
cord-022053-idft1p6d	39	56	.	.	.
cord-022053-idft1p6d	40	1	MALDI	MALDI	NNP
cord-022053-idft1p6d	40	2	-	-	HYPH
cord-022053-idft1p6d	40	3	TOF	TOF	NNP
cord-022053-idft1p6d	40	4	,	,	,
cord-022053-idft1p6d	40	5	a	a	DT
cord-022053-idft1p6d	40	6	mass	mass	NN
cord-022053-idft1p6d	40	7	spectrometry	spectrometry	NN
cord-022053-idft1p6d	40	8	-	-	HYPH
cord-022053-idft1p6d	40	9	based	base	VBN
cord-022053-idft1p6d	40	10	method	method	NN
cord-022053-idft1p6d	40	11	,	,	,
cord-022053-idft1p6d	40	12	allows	allow	VBZ
cord-022053-idft1p6d	40	13	for	for	IN
cord-022053-idft1p6d	40	14	a	a	DT
cord-022053-idft1p6d	40	15	rapid	rapid	JJ
cord-022053-idft1p6d	40	16	(	(	-LRB-
cord-022053-idft1p6d	40	17	minutes	minute	NNS
cord-022053-idft1p6d	40	18	)	)	-RRB-
cord-022053-idft1p6d	40	19	assessment	assessment	NN
cord-022053-idft1p6d	40	20	of	of	IN
cord-022053-idft1p6d	40	21	the	the	DT
cord-022053-idft1p6d	40	22	characteristic	characteristic	JJ
cord-022053-idft1p6d	40	23	complement	complement	NN
cord-022053-idft1p6d	40	24	of	of	IN
cord-022053-idft1p6d	40	25	ribosomal	ribosomal	JJ
cord-022053-idft1p6d	40	26	proteins	protein	NNS
cord-022053-idft1p6d	40	27	in	in	IN
cord-022053-idft1p6d	40	28	an	an	DT
cord-022053-idft1p6d	40	29	isolate	isolate	NN
cord-022053-idft1p6d	40	30	,	,	,
cord-022053-idft1p6d	40	31	providing	provide	VBG
cord-022053-idft1p6d	40	32	a	a	DT
cord-022053-idft1p6d	40	33	species	species	NN
cord-022053-idft1p6d	40	34	-	-	HYPH
cord-022053-idft1p6d	40	35	level	level	NN
cord-022053-idft1p6d	40	36	identification	identification	NN
cord-022053-idft1p6d	40	37	in	in	IN
cord-022053-idft1p6d	40	38	many	many	JJ
cord-022053-idft1p6d	40	39	cases	case	NNS
cord-022053-idft1p6d	40	40	.	.	.
cord-022053-idft1p6d	41	1	After	after	IN
cord-022053-idft1p6d	41	2	a	a	DT
cord-022053-idft1p6d	41	3	microbial	microbial	JJ
cord-022053-idft1p6d	41	4	colony	colony	NN
cord-022053-idft1p6d	41	5	forms	form	NNS
cord-022053-idft1p6d	41	6	,	,	,
cord-022053-idft1p6d	41	7	it	-PRON-	PRP
cord-022053-idft1p6d	41	8	can	can	MD
cord-022053-idft1p6d	41	9	be	be	VB
cord-022053-idft1p6d	41	10	spotted	spot	VBN
cord-022053-idft1p6d	41	11	onto	onto	IN
cord-022053-idft1p6d	41	12	a	a	DT
cord-022053-idft1p6d	41	13	MALDI	MALDI	NNP
cord-022053-idft1p6d	41	14	plate	plate	NN
cord-022053-idft1p6d	41	15	in	in	IN
cord-022053-idft1p6d	41	16	matrix	matrix	NN
cord-022053-idft1p6d	41	17	compound	compound	NN
cord-022053-idft1p6d	41	18	and	and	CC
cord-022053-idft1p6d	41	19	loaded	load	VBN
cord-022053-idft1p6d	41	20	onto	onto	IN
cord-022053-idft1p6d	41	21	the	the	DT
cord-022053-idft1p6d	41	22	mass	mass	NN
cord-022053-idft1p6d	41	23	spectrophotometer	spectrophotometer	NN
cord-022053-idft1p6d	41	24	.	.	.
cord-022053-idft1p6d	42	1	This	this	DT
cord-022053-idft1p6d	42	2	topic	topic	NN
cord-022053-idft1p6d	42	3	has	have	VBZ
cord-022053-idft1p6d	42	4	been	be	VBN
cord-022053-idft1p6d	42	5	reviewed	review	VBN
cord-022053-idft1p6d	42	6	in	in	IN
cord-022053-idft1p6d	42	7	great	great	JJ
cord-022053-idft1p6d	42	8	detail	detail	NN
cord-022053-idft1p6d	42	9	.	.	.
cord-022053-idft1p6d	43	1	[	[	-LRB-
cord-022053-idft1p6d	43	2	3	3	CD
cord-022053-idft1p6d	43	3	]	]	-RRB-
cord-022053-idft1p6d	43	4	[	[	-LRB-
cord-022053-idft1p6d	43	5	4	4	CD
cord-022053-idft1p6d	43	6	]	]	-RRB-
cord-022053-idft1p6d	43	7	[	[	-LRB-
cord-022053-idft1p6d	43	8	5	5	CD
cord-022053-idft1p6d	43	9	]	]	-RRB-
cord-022053-idft1p6d	44	1	Briefly	briefly	RB
cord-022053-idft1p6d	44	2	,	,	,
cord-022053-idft1p6d	44	3	a	a	DT
cord-022053-idft1p6d	44	4	laser	laser	NN
cord-022053-idft1p6d	44	5	is	be	VBZ
cord-022053-idft1p6d	44	6	focused	focus	VBN
cord-022053-idft1p6d	44	7	onto	onto	IN
cord-022053-idft1p6d	44	8	the	the	DT
cord-022053-idft1p6d	44	9	sample	sample	NN
cord-022053-idft1p6d	44	10	/	/	SYM
cord-022053-idft1p6d	44	11	matrix	matrix	NN
cord-022053-idft1p6d	44	12	spot	spot	NN
cord-022053-idft1p6d	44	13	,	,	,
cord-022053-idft1p6d	44	14	causing	cause	VBG
cord-022053-idft1p6d	44	15	sublimation	sublimation	NN
cord-022053-idft1p6d	44	16	,	,	,
cord-022053-idft1p6d	44	17	ionization	ionization	NN
cord-022053-idft1p6d	44	18	,	,	,
cord-022053-idft1p6d	44	19	migration	migration	NN
cord-022053-idft1p6d	44	20	through	through	IN
cord-022053-idft1p6d	44	21	a	a	DT
cord-022053-idft1p6d	44	22	time	time	NN
cord-022053-idft1p6d	44	23	of	of	IN
cord-022053-idft1p6d	44	24	flight	flight	NN
cord-022053-idft1p6d	44	25	tube	tube	NN
cord-022053-idft1p6d	44	26	,	,	,
cord-022053-idft1p6d	44	27	and	and	CC
cord-022053-idft1p6d	44	28	detection	detection	NN
cord-022053-idft1p6d	44	29	by	by	IN
cord-022053-idft1p6d	44	30	a	a	DT
cord-022053-idft1p6d	44	31	mass	mass	NN
cord-022053-idft1p6d	44	32	spectrometer	spectrometer	NN
cord-022053-idft1p6d	44	33	(	(	-LRB-
cord-022053-idft1p6d	44	34	MS).The	MS).The	NNP
cord-022053-idft1p6d	44	35	readout	readout	NN
cord-022053-idft1p6d	44	36	is	be	VBZ
cord-022053-idft1p6d	44	37	a	a	DT
cord-022053-idft1p6d	44	38	spectrum	spectrum	NN
cord-022053-idft1p6d	44	39	of	of	IN
cord-022053-idft1p6d	44	40	peaks	peak	NNS
cord-022053-idft1p6d	44	41	representing	represent	VBG
cord-022053-idft1p6d	44	42	mass	mass	NN
cord-022053-idft1p6d	44	43	to	to	TO
cord-022053-idft1p6d	44	44	charge	charge	VB
cord-022053-idft1p6d	44	45	ratios	ratio	NNS
cord-022053-idft1p6d	44	46	(	(	-LRB-
cord-022053-idft1p6d	44	47	M	M	NNP
cord-022053-idft1p6d	44	48	/	/	SYM
cord-022053-idft1p6d	44	49	Z	Z	NNP
cord-022053-idft1p6d	44	50	)	)	-RRB-
cord-022053-idft1p6d	44	51	of	of	IN
cord-022053-idft1p6d	44	52	different	different	JJ
cord-022053-idft1p6d	44	53	analytes	analyte	NNS
cord-022053-idft1p6d	44	54	.	.	.
cord-022053-idft1p6d	45	1	The	the	DT
cord-022053-idft1p6d	45	2	mass	mass	NN
cord-022053-idft1p6d	45	3	range	range	NN
cord-022053-idft1p6d	45	4	(	(	-LRB-
cord-022053-idft1p6d	45	5	approximately	approximately	RB
cord-022053-idft1p6d	45	6	2	2	CD
cord-022053-idft1p6d	45	7	to	to	TO
cord-022053-idft1p6d	45	8	20	20	CD
cord-022053-idft1p6d	45	9	kDa	kDa	NNS
cord-022053-idft1p6d	45	10	)	)	-RRB-
cord-022053-idft1p6d	45	11	is	be	VBZ
cord-022053-idft1p6d	45	12	highly	highly	RB
cord-022053-idft1p6d	45	13	enriched	enrich	VBN
cord-022053-idft1p6d	45	14	for	for	IN
cord-022053-idft1p6d	45	15	ribosomal	ribosomal	JJ
cord-022053-idft1p6d	45	16	proteins	protein	NNS
cord-022053-idft1p6d	45	17	,	,	,
cord-022053-idft1p6d	45	18	which	which	WDT
cord-022053-idft1p6d	45	19	make	make	VBP
cord-022053-idft1p6d	45	20	up	up	RP
cord-022053-idft1p6d	45	21	a	a	DT
cord-022053-idft1p6d	45	22	large	large	JJ
cord-022053-idft1p6d	45	23	share	share	NN
cord-022053-idft1p6d	45	24	of	of	IN
cord-022053-idft1p6d	45	25	the	the	DT
cord-022053-idft1p6d	45	26	typical	typical	JJ
cord-022053-idft1p6d	45	27	MALDI	MALDI	NNP
cord-022053-idft1p6d	45	28	spectra	spectrum	NNS
cord-022053-idft1p6d	45	29	on	on	IN
cord-022053-idft1p6d	45	30	clinical	clinical	JJ
cord-022053-idft1p6d	45	31	instruments	instrument	NNS
cord-022053-idft1p6d	45	32	.	.	.
cord-022053-idft1p6d	46	1	Spectra	Spectra	NNP
cord-022053-idft1p6d	46	2	are	be	VBP
cord-022053-idft1p6d	46	3	compared	compare	VBN
cord-022053-idft1p6d	46	4	with	with	IN
cord-022053-idft1p6d	46	5	curated	curate	VBN
cord-022053-idft1p6d	46	6	databases	database	NNS
cord-022053-idft1p6d	46	7	and	and	CC
cord-022053-idft1p6d	46	8	the	the	DT
cord-022053-idft1p6d	46	9	result	result	NN
cord-022053-idft1p6d	46	10	is	be	VBZ
cord-022053-idft1p6d	46	11	returned	return	VBN
cord-022053-idft1p6d	46	12	along	along	RP
cord-022053-idft1p6d	46	13	with	with	IN
cord-022053-idft1p6d	46	14	a	a	DT
cord-022053-idft1p6d	46	15	metric	metric	JJ
cord-022053-idft1p6d	46	16	describing	describe	VBG
cord-022053-idft1p6d	46	17	the	the	DT
cord-022053-idft1p6d	46	18	strength	strength	NN
cord-022053-idft1p6d	46	19	of	of	IN
cord-022053-idft1p6d	46	20	the	the	DT
cord-022053-idft1p6d	46	21	identification	identification	NN
cord-022053-idft1p6d	46	22	.	.	.
cord-022053-idft1p6d	47	1	This	this	DT
cord-022053-idft1p6d	47	2	technology	technology	NN
cord-022053-idft1p6d	47	3	has	have	VBZ
cord-022053-idft1p6d	47	4	been	be	VBN
cord-022053-idft1p6d	47	5	widely	widely	RB
cord-022053-idft1p6d	47	6	adopted	adopt	VBN
cord-022053-idft1p6d	47	7	in	in	IN
cord-022053-idft1p6d	47	8	Europe	Europe	NNP
cord-022053-idft1p6d	47	9	and	and	CC
cord-022053-idft1p6d	47	10	is	be	VBZ
cord-022053-idft1p6d	47	11	gradually	gradually	RB
cord-022053-idft1p6d	47	12	entering	enter	VBG
cord-022053-idft1p6d	47	13	clinical	clinical	JJ
cord-022053-idft1p6d	47	14	microbiology	microbiology	NN
cord-022053-idft1p6d	47	15	labs	lab	NNS
cord-022053-idft1p6d	47	16	in	in	IN
cord-022053-idft1p6d	47	17	the	the	DT
cord-022053-idft1p6d	47	18	United	United	NNP
cord-022053-idft1p6d	47	19	States	States	NNP
cord-022053-idft1p6d	47	20	.	.	.
cord-022053-idft1p6d	48	1	There	there	EX
cord-022053-idft1p6d	48	2	are	be	VBP
cord-022053-idft1p6d	48	3	currently	currently	RB
cord-022053-idft1p6d	48	4	two	two	CD
cord-022053-idft1p6d	48	5	US	US	NNP
cord-022053-idft1p6d	48	6	Food	Food	NNP
cord-022053-idft1p6d	48	7	and	and	CC
cord-022053-idft1p6d	48	8	Drug	Drug	NNP
cord-022053-idft1p6d	48	9	Administration	Administration	NNP
cord-022053-idft1p6d	48	10	(	(	-LRB-
cord-022053-idft1p6d	48	11	FDA)-approved	FDA)-approved	NNP
cord-022053-idft1p6d	48	12	systems	system	NNS
cord-022053-idft1p6d	48	13	:	:	:
cord-022053-idft1p6d	48	14	the	the	DT
cord-022053-idft1p6d	48	15	Vitek	Vitek	NNP
cord-022053-idft1p6d	48	16	MS	MS	NNP
cord-022053-idft1p6d	48	17	(	(	-LRB-
cord-022053-idft1p6d	48	18	BioMérieux	BioMérieux	NNP
cord-022053-idft1p6d	48	19	,	,	,
cord-022053-idft1p6d	48	20	Durham	Durham	NNP
cord-022053-idft1p6d	48	21	,	,	,
cord-022053-idft1p6d	48	22	North	North	NNP
cord-022053-idft1p6d	48	23	Carolina	Carolina	NNP
cord-022053-idft1p6d	48	24	)	)	-RRB-
cord-022053-idft1p6d	48	25	and	and	CC
cord-022053-idft1p6d	48	26	the	the	DT
cord-022053-idft1p6d	48	27	MALDI	MALDI	NNP
cord-022053-idft1p6d	48	28	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	48	29	(	(	-LRB-
cord-022053-idft1p6d	48	30	Bruker	Bruker	NNP
cord-022053-idft1p6d	48	31	Daltonics	Daltonics	NNP
cord-022053-idft1p6d	48	32	Inc.	Inc.	NNP
cord-022053-idft1p6d	48	33	,	,	,
cord-022053-idft1p6d	48	34	Billerica	Billerica	NNP
cord-022053-idft1p6d	48	35	,	,	,
cord-022053-idft1p6d	48	36	Massachusetts	Massachusetts	NNP
cord-022053-idft1p6d	48	37	)	)	-RRB-
cord-022053-idft1p6d	48	38	.	.	.
cord-022053-idft1p6d	49	1	Although	although	IN
cord-022053-idft1p6d	49	2	the	the	DT
cord-022053-idft1p6d	49	3	technology	technology	NN
cord-022053-idft1p6d	49	4	behind	behind	IN
cord-022053-idft1p6d	49	5	these	these	DT
cord-022053-idft1p6d	49	6	two	two	CD
cord-022053-idft1p6d	49	7	systems	system	NNS
cord-022053-idft1p6d	49	8	is	be	VBZ
cord-022053-idft1p6d	49	9	essentially	essentially	RB
cord-022053-idft1p6d	49	10	equivalent	equivalent	JJ
cord-022053-idft1p6d	49	11	,	,	,
cord-022053-idft1p6d	49	12	they	-PRON-	PRP
cord-022053-idft1p6d	49	13	differ	differ	VBP
cord-022053-idft1p6d	49	14	in	in	IN
cord-022053-idft1p6d	49	15	their	-PRON-	PRP$
cord-022053-idft1p6d	49	16	curated	curate	VBN
cord-022053-idft1p6d	49	17	libraries	library	NNS
cord-022053-idft1p6d	49	18	,	,	,
cord-022053-idft1p6d	49	19	software	software	NN
cord-022053-idft1p6d	49	20	,	,	,
cord-022053-idft1p6d	49	21	identification	identification	NN
cord-022053-idft1p6d	49	22	algorithms	algorithm	NNS
cord-022053-idft1p6d	49	23	,	,	,
cord-022053-idft1p6d	49	24	and	and	CC
cord-022053-idft1p6d	49	25	scoring	score	VBG
cord-022053-idft1p6d	49	26	systems	system	NNS
cord-022053-idft1p6d	49	27	.	.	.
cord-022053-idft1p6d	50	1	5	5	LS
cord-022053-idft1p6d	51	1	For	for	IN
cord-022053-idft1p6d	51	2	example	example	NN
cord-022053-idft1p6d	51	3	,	,	,
cord-022053-idft1p6d	51	4	the	the	DT
cord-022053-idft1p6d	51	5	Vitek	Vitek	NNP
cord-022053-idft1p6d	51	6	MS	MS	NNP
cord-022053-idft1p6d	51	7	reports	report	VBZ
cord-022053-idft1p6d	51	8	isolates	isolate	NNS
cord-022053-idft1p6d	51	9	with	with	IN
cord-022053-idft1p6d	51	10	a	a	DT
cord-022053-idft1p6d	51	11	confidence	confidence	NN
cord-022053-idft1p6d	51	12	value	value	NN
cord-022053-idft1p6d	51	13	of	of	IN
cord-022053-idft1p6d	51	14	1	1	CD
cord-022053-idft1p6d	51	15	%	%	NN
cord-022053-idft1p6d	51	16	to	to	TO
cord-022053-idft1p6d	51	17	100	100	CD
cord-022053-idft1p6d	51	18	%	%	NN
cord-022053-idft1p6d	51	19	,	,	,
cord-022053-idft1p6d	51	20	whereas	whereas	IN
cord-022053-idft1p6d	51	21	the	the	DT
cord-022053-idft1p6d	51	22	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	51	23	returns	return	VBZ
cord-022053-idft1p6d	51	24	a	a	DT
cord-022053-idft1p6d	51	25	score	score	NN
cord-022053-idft1p6d	51	26	that	that	WDT
cord-022053-idft1p6d	51	27	can	can	MD
cord-022053-idft1p6d	51	28	range	range	VB
cord-022053-idft1p6d	51	29	from	from	IN
cord-022053-idft1p6d	51	30	0	0	CD
cord-022053-idft1p6d	51	31	to	to	IN
cord-022053-idft1p6d	51	32	3.000	3.000	CD
cord-022053-idft1p6d	51	33	.	.	.
cord-022053-idft1p6d	52	1	For	for	IN
cord-022053-idft1p6d	52	2	most	most	JJS
cord-022053-idft1p6d	52	3	applications	application	NNS
cord-022053-idft1p6d	52	4	a	a	DT
cord-022053-idft1p6d	52	5	score	score	NN
cord-022053-idft1p6d	52	6	of	of	IN
cord-022053-idft1p6d	52	7	2.000	2.000	CD
cord-022053-idft1p6d	52	8	or	or	CC
cord-022053-idft1p6d	52	9	greater	great	JJR
cord-022053-idft1p6d	52	10	is	be	VBZ
cord-022053-idft1p6d	52	11	necessary	necessary	JJ
cord-022053-idft1p6d	52	12	for	for	IN
cord-022053-idft1p6d	52	13	a	a	DT
cord-022053-idft1p6d	52	14	species	species	NN
cord-022053-idft1p6d	52	15	level	level	NN
cord-022053-idft1p6d	52	16	identification	identification	NN
cord-022053-idft1p6d	52	17	.	.	.
cord-022053-idft1p6d	53	1	Because	because	IN
cord-022053-idft1p6d	53	2	of	of	IN
cord-022053-idft1p6d	53	3	this	this	DT
cord-022053-idft1p6d	53	4	,	,	,
cord-022053-idft1p6d	53	5	it	-PRON-	PRP
cord-022053-idft1p6d	53	6	can	can	MD
cord-022053-idft1p6d	53	7	be	be	VB
cord-022053-idft1p6d	53	8	difficult	difficult	JJ
cord-022053-idft1p6d	53	9	to	to	TO
cord-022053-idft1p6d	53	10	directly	directly	RB
cord-022053-idft1p6d	53	11	compare	compare	VB
cord-022053-idft1p6d	53	12	results	result	NNS
cord-022053-idft1p6d	53	13	between	between	IN
cord-022053-idft1p6d	53	14	the	the	DT
cord-022053-idft1p6d	53	15	two	two	CD
cord-022053-idft1p6d	53	16	systems	system	NNS
cord-022053-idft1p6d	53	17	.	.	.
cord-022053-idft1p6d	54	1	There	there	EX
cord-022053-idft1p6d	54	2	have	have	VBP
cord-022053-idft1p6d	54	3	been	be	VBN
cord-022053-idft1p6d	54	4	several	several	JJ
cord-022053-idft1p6d	54	5	studies	study	NNS
cord-022053-idft1p6d	54	6	using	use	VBG
cord-022053-idft1p6d	54	7	both	both	DT
cord-022053-idft1p6d	54	8	platforms	platform	NNS
cord-022053-idft1p6d	54	9	back	back	RB
cord-022053-idft1p6d	54	10	to	to	IN
cord-022053-idft1p6d	54	11	back	back	NN
cord-022053-idft1p6d	54	12	.	.	.
cord-022053-idft1p6d	55	1	One	one	CD
cord-022053-idft1p6d	55	2	study	study	NN
cord-022053-idft1p6d	55	3	on	on	IN
cord-022053-idft1p6d	55	4	a	a	DT
cord-022053-idft1p6d	55	5	large	large	JJ
cord-022053-idft1p6d	55	6	collection	collection	NN
cord-022053-idft1p6d	55	7	of	of	IN
cord-022053-idft1p6d	55	8	642	642	CD
cord-022053-idft1p6d	55	9	strains	strain	NNS
cord-022053-idft1p6d	55	10	of	of	IN
cord-022053-idft1p6d	55	11	bacteria	bacteria	NNS
cord-022053-idft1p6d	55	12	,	,	,
cord-022053-idft1p6d	55	13	yeasts	yeast	NNS
cord-022053-idft1p6d	55	14	,	,	,
cord-022053-idft1p6d	55	15	and	and	CC
cord-022053-idft1p6d	55	16	molds	mold	NNS
cord-022053-idft1p6d	55	17	demonstrated	demonstrate	VBD
cord-022053-idft1p6d	55	18	comparable	comparable	JJ
cord-022053-idft1p6d	55	19	performance	performance	NN
cord-022053-idft1p6d	55	20	,	,	,
cord-022053-idft1p6d	55	21	although	although	IN
cord-022053-idft1p6d	55	22	noting	note	VBG
cord-022053-idft1p6d	55	23	that	that	IN
cord-022053-idft1p6d	55	24	the	the	DT
cord-022053-idft1p6d	55	25	library	library	NN
cord-022053-idft1p6d	55	26	coverage	coverage	NN
cord-022053-idft1p6d	55	27	of	of	IN
cord-022053-idft1p6d	55	28	the	the	DT
cord-022053-idft1p6d	55	29	test	test	NN
cord-022053-idft1p6d	55	30	cohort	cohort	NN
cord-022053-idft1p6d	55	31	was	be	VBD
cord-022053-idft1p6d	55	32	greater	great	JJR
cord-022053-idft1p6d	55	33	with	with	IN
cord-022053-idft1p6d	55	34	the	the	DT
cord-022053-idft1p6d	55	35	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	55	36	(	(	-LRB-
cord-022053-idft1p6d	55	37	572	572	CD
cord-022053-idft1p6d	55	38	strains	strain	NNS
cord-022053-idft1p6d	55	39	)	)	-RRB-
cord-022053-idft1p6d	55	40	than	than	IN
cord-022053-idft1p6d	55	41	the	the	DT
cord-022053-idft1p6d	55	42	Vitek	Vitek	NNP
cord-022053-idft1p6d	55	43	MS	MS	NNP
cord-022053-idft1p6d	55	44	(	(	-LRB-
cord-022053-idft1p6d	55	45	406	406	CD
cord-022053-idft1p6d	55	46	)	)	-RRB-
cord-022053-idft1p6d	55	47	and	and	CC
cord-022053-idft1p6d	55	48	that	that	IN
cord-022053-idft1p6d	55	49	the	the	DT
cord-022053-idft1p6d	55	50	Vitek	Vitek	NNP
cord-022053-idft1p6d	55	51	was	be	VBD
cord-022053-idft1p6d	55	52	more	more	RBR
cord-022053-idft1p6d	55	53	likely	likely	JJ
cord-022053-idft1p6d	55	54	to	to	TO
cord-022053-idft1p6d	55	55	output	output	VB
cord-022053-idft1p6d	55	56	a	a	DT
cord-022053-idft1p6d	55	57	misidentification	misidentification	NN
cord-022053-idft1p6d	55	58	for	for	IN
cord-022053-idft1p6d	55	59	strains	strain	NNS
cord-022053-idft1p6d	55	60	not	not	RB
cord-022053-idft1p6d	55	61	represented	represent	VBN
cord-022053-idft1p6d	55	62	in	in	IN
cord-022053-idft1p6d	55	63	the	the	DT
cord-022053-idft1p6d	55	64	library	library	NN
cord-022053-idft1p6d	55	65	.	.	.
cord-022053-idft1p6d	56	1	6	6	CD
cord-022053-idft1p6d	57	1	For	for	IN
cord-022053-idft1p6d	57	2	FDA	FDA	NNP
cord-022053-idft1p6d	57	3	-	-	HYPH
cord-022053-idft1p6d	57	4	approved	approve	VBN
cord-022053-idft1p6d	57	5	applications	application	NNS
cord-022053-idft1p6d	57	6	,	,	,
cord-022053-idft1p6d	57	7	both	both	CC
cord-022053-idft1p6d	57	8	the	the	DT
cord-022053-idft1p6d	57	9	Vitek	Vitek	NNP
cord-022053-idft1p6d	57	10	MS	MS	NNP
cord-022053-idft1p6d	57	11	and	and	CC
cord-022053-idft1p6d	57	12	the	the	DT
cord-022053-idft1p6d	57	13	Bruker	Bruker	NNP
cord-022053-idft1p6d	57	14	may	may	MD
cord-022053-idft1p6d	57	15	be	be	VB
cord-022053-idft1p6d	57	16	used	use	VBN
cord-022053-idft1p6d	57	17	for	for	IN
cord-022053-idft1p6d	57	18	a	a	DT
cord-022053-idft1p6d	57	19	large	large	JJ
cord-022053-idft1p6d	57	20	library	library	NN
cord-022053-idft1p6d	57	21	of	of	IN
cord-022053-idft1p6d	57	22	aerobic	aerobic	JJ
cord-022053-idft1p6d	57	23	gram	gram	NN
cord-022053-idft1p6d	57	24	-	-	HYPH
cord-022053-idft1p6d	57	25	negative	negative	JJ
cord-022053-idft1p6d	57	26	and	and	CC
cord-022053-idft1p6d	57	27	gram	gram	NN
cord-022053-idft1p6d	57	28	-	-	HYPH
cord-022053-idft1p6d	57	29	positive	positive	JJ
cord-022053-idft1p6d	57	30	organisms	organism	NNS
cord-022053-idft1p6d	57	31	,	,	,
cord-022053-idft1p6d	57	32	as	as	RB
cord-022053-idft1p6d	57	33	well	well	RB
cord-022053-idft1p6d	57	34	as	as	IN
cord-022053-idft1p6d	57	35	several	several	JJ
cord-022053-idft1p6d	57	36	anaerobes	anaerobe	NNS
cord-022053-idft1p6d	57	37	and	and	CC
cord-022053-idft1p6d	57	38	yeast	yeast	NN
cord-022053-idft1p6d	57	39	.	.	.
cord-022053-idft1p6d	58	1	In	in	IN
cord-022053-idft1p6d	58	2	general	general	JJ
cord-022053-idft1p6d	58	3	,	,	,
cord-022053-idft1p6d	58	4	performance	performance	NN
cord-022053-idft1p6d	58	5	has	have	VBZ
cord-022053-idft1p6d	58	6	been	be	VBN
cord-022053-idft1p6d	58	7	reported	report	VBN
cord-022053-idft1p6d	58	8	to	to	TO
cord-022053-idft1p6d	58	9	equal	equal	VB
cord-022053-idft1p6d	58	10	or	or	CC
cord-022053-idft1p6d	58	11	exceed	exceed	VB
cord-022053-idft1p6d	58	12	traditional	traditional	JJ
cord-022053-idft1p6d	58	13	biochemical	biochemical	JJ
cord-022053-idft1p6d	58	14	systems	system	NNS
cord-022053-idft1p6d	58	15	,	,	,
cord-022053-idft1p6d	58	16	although	although	IN
cord-022053-idft1p6d	58	17	it	-PRON-	PRP
cord-022053-idft1p6d	58	18	seems	seem	VBZ
cord-022053-idft1p6d	58	19	to	to	TO
cord-022053-idft1p6d	58	20	be	be	VB
cord-022053-idft1p6d	58	21	stronger	strong	JJR
cord-022053-idft1p6d	58	22	for	for	IN
cord-022053-idft1p6d	58	23	gram	gram	NN
cord-022053-idft1p6d	58	24	-	-	HYPH
cord-022053-idft1p6d	58	25	negative	negative	JJ
cord-022053-idft1p6d	58	26	than	than	IN
cord-022053-idft1p6d	58	27	gram	gram	NN
cord-022053-idft1p6d	58	28	-	-	HYPH
cord-022053-idft1p6d	58	29	positive	positive	JJ
cord-022053-idft1p6d	58	30	organisms	organism	NNS
cord-022053-idft1p6d	58	31	.	.	.
cord-022053-idft1p6d	59	1	5	5	LS
cord-022053-idft1p6d	59	2	,	,	,
cord-022053-idft1p6d	59	3	7	7	CD
cord-022053-idft1p6d	59	4	Lackluster	lackluster	JJ
cord-022053-idft1p6d	59	5	performance	performance	NN
cord-022053-idft1p6d	59	6	,	,	,
cord-022053-idft1p6d	59	7	in	in	IN
cord-022053-idft1p6d	59	8	particular	particular	JJ
cord-022053-idft1p6d	59	9	,	,	,
cord-022053-idft1p6d	59	10	has	have	VBZ
cord-022053-idft1p6d	59	11	been	be	VBN
cord-022053-idft1p6d	59	12	noted	note	VBN
cord-022053-idft1p6d	59	13	for	for	IN
cord-022053-idft1p6d	59	14	several	several	JJ
cord-022053-idft1p6d	59	15	grampositive	grampositive	JJ
cord-022053-idft1p6d	59	16	rods	rod	NNS
cord-022053-idft1p6d	59	17	.	.	.
cord-022053-idft1p6d	60	1	In	in	IN
cord-022053-idft1p6d	60	2	a	a	DT
cord-022053-idft1p6d	60	3	study	study	NN
cord-022053-idft1p6d	60	4	with	with	IN
cord-022053-idft1p6d	60	5	the	the	DT
cord-022053-idft1p6d	60	6	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	60	7	,	,	,
cord-022053-idft1p6d	60	8	the	the	DT
cord-022053-idft1p6d	60	9	system	system	NN
cord-022053-idft1p6d	60	10	was	be	VBD
cord-022053-idft1p6d	60	11	unable	unable	JJ
cord-022053-idft1p6d	60	12	to	to	TO
cord-022053-idft1p6d	60	13	identify	identify	VB
cord-022053-idft1p6d	60	14	several	several	JJ
cord-022053-idft1p6d	60	15	isolates	isolate	NNS
cord-022053-idft1p6d	60	16	of	of	IN
cord-022053-idft1p6d	60	17	Nocardia	Nocardia	NNP
cord-022053-idft1p6d	60	18	,	,	,
cord-022053-idft1p6d	60	19	Tsukamurella	Tsukamurella	NNP
cord-022053-idft1p6d	60	20	,	,	,
cord-022053-idft1p6d	60	21	Kocuria	Kocuria	NNP
cord-022053-idft1p6d	60	22	,	,	,
cord-022053-idft1p6d	60	23	or	or	CC
cord-022053-idft1p6d	60	24	Gordonia	Gordonia	NNP
cord-022053-idft1p6d	60	25	,	,	,
cord-022053-idft1p6d	60	26	although	although	IN
cord-022053-idft1p6d	60	27	89.7	89.7	CD
cord-022053-idft1p6d	60	28	%	%	NN
cord-022053-idft1p6d	60	29	of	of	IN
cord-022053-idft1p6d	60	30	Listeria	Listeria	NNP
cord-022053-idft1p6d	60	31	and	and	CC
cord-022053-idft1p6d	60	32	80	80	CD
cord-022053-idft1p6d	60	33	%	%	NN
cord-022053-idft1p6d	60	34	of	of	IN
cord-022053-idft1p6d	60	35	Rhodococcus	Rhodococcus	NNP
cord-022053-idft1p6d	60	36	were	be	VBD
cord-022053-idft1p6d	60	37	correctly	correctly	RB
cord-022053-idft1p6d	60	38	classified	classify	VBN
cord-022053-idft1p6d	60	39	.	.	.
cord-022053-idft1p6d	61	1	8	8	CD
cord-022053-idft1p6d	61	2	Members	member	NNS
cord-022053-idft1p6d	61	3	of	of	IN
cord-022053-idft1p6d	61	4	Corynebacteria	Corynebacteria	NNP
cord-022053-idft1p6d	61	5	,	,	,
cord-022053-idft1p6d	61	6	Lactobacillus	Lactobacillus	NNP
cord-022053-idft1p6d	61	7	,	,	,
cord-022053-idft1p6d	61	8	and	and	CC
cord-022053-idft1p6d	61	9	some	some	DT
cord-022053-idft1p6d	61	10	Listeria	Listeria	NNP
cord-022053-idft1p6d	61	11	also	also	RB
cord-022053-idft1p6d	61	12	seem	seem	VBP
cord-022053-idft1p6d	61	13	to	to	TO
cord-022053-idft1p6d	61	14	present	present	VB
cord-022053-idft1p6d	61	15	some	some	DT
cord-022053-idft1p6d	61	16	difficulty	difficulty	NN
cord-022053-idft1p6d	61	17	,	,	,
cord-022053-idft1p6d	61	18	both	both	CC
cord-022053-idft1p6d	61	19	in	in	IN
cord-022053-idft1p6d	61	20	terms	term	NNS
cord-022053-idft1p6d	61	21	of	of	IN
cord-022053-idft1p6d	61	22	difficulty	difficulty	NN
cord-022053-idft1p6d	61	23	discriminating	discriminate	VBG
cord-022053-idft1p6d	61	24	between	between	IN
cord-022053-idft1p6d	61	25	species	specie	NNS
cord-022053-idft1p6d	61	26	and	and	CC
cord-022053-idft1p6d	61	27	in	in	IN
cord-022053-idft1p6d	61	28	requiring	require	VBG
cord-022053-idft1p6d	61	29	a	a	DT
cord-022053-idft1p6d	61	30	lowered	lower	VBN
cord-022053-idft1p6d	61	31	score	score	NN
cord-022053-idft1p6d	61	32	cutoff	cutoff	NN
cord-022053-idft1p6d	61	33	(	(	-LRB-
cord-022053-idft1p6d	61	34	1.7	1.7	CD
cord-022053-idft1p6d	61	35	)	)	-RRB-
cord-022053-idft1p6d	61	36	for	for	IN
cord-022053-idft1p6d	61	37	species	species	NN
cord-022053-idft1p6d	61	38	-	-	HYPH
cord-022053-idft1p6d	61	39	level	level	NN
cord-022053-idft1p6d	61	40	identification	identification	NN
cord-022053-idft1p6d	61	41	.	.	.
cord-022053-idft1p6d	62	1	9	9	CD
cord-022053-idft1p6d	63	1	In	in	IN
cord-022053-idft1p6d	63	2	similar	similar	JJ
cord-022053-idft1p6d	63	3	studies	study	NNS
cord-022053-idft1p6d	63	4	using	use	VBG
cord-022053-idft1p6d	63	5	the	the	DT
cord-022053-idft1p6d	63	6	Vitek	Vitek	NNP
cord-022053-idft1p6d	63	7	platform	platform	NN
cord-022053-idft1p6d	63	8	,	,	,
cord-022053-idft1p6d	63	9	there	there	EX
cord-022053-idft1p6d	63	10	were	be	VBD
cord-022053-idft1p6d	63	11	also	also	RB
cord-022053-idft1p6d	63	12	reported	report	VBN
cord-022053-idft1p6d	63	13	problems	problem	NNS
cord-022053-idft1p6d	63	14	in	in	IN
cord-022053-idft1p6d	63	15	speciation	speciation	NN
cord-022053-idft1p6d	63	16	of	of	IN
cord-022053-idft1p6d	63	17	Listeria	Listeria	NNP
cord-022053-idft1p6d	63	18	.	.	.
cord-022053-idft1p6d	64	1	10	10	CD
cord-022053-idft1p6d	65	1	The	the	DT
cord-022053-idft1p6d	65	2	misidentification	misidentification	NN
cord-022053-idft1p6d	65	3	of	of	IN
cord-022053-idft1p6d	65	4	a	a	DT
cord-022053-idft1p6d	65	5	Kocuria	Kocuria	NNP
cord-022053-idft1p6d	65	6	as	as	IN
cord-022053-idft1p6d	65	7	a	a	DT
cord-022053-idft1p6d	65	8	Corynebacterium	Corynebacterium	NNP
cord-022053-idft1p6d	65	9	has	have	VBZ
cord-022053-idft1p6d	65	10	also	also	RB
cord-022053-idft1p6d	65	11	been	be	VBN
cord-022053-idft1p6d	65	12	reported	report	VBN
cord-022053-idft1p6d	65	13	.	.	.
cord-022053-idft1p6d	66	1	11	11	CD
cord-022053-idft1p6d	67	1	Among	among	IN
cord-022053-idft1p6d	67	2	both	both	DT
cord-022053-idft1p6d	67	3	gram	gram	NN
cord-022053-idft1p6d	67	4	-	-	HYPH
cord-022053-idft1p6d	67	5	positive	positive	JJ
cord-022053-idft1p6d	67	6	and	and	CC
cord-022053-idft1p6d	67	7	gram	gram	JJ
cord-022053-idft1p6d	67	8	-	-	HYPH
cord-022053-idft1p6d	67	9	negative	negative	JJ
cord-022053-idft1p6d	67	10	organisms	organism	NNS
cord-022053-idft1p6d	67	11	,	,	,
cord-022053-idft1p6d	67	12	MALDI	MALDI	NNP
cord-022053-idft1p6d	67	13	-	-	HYPH
cord-022053-idft1p6d	67	14	TOF	TOF	NNP
cord-022053-idft1p6d	67	15	has	have	VBZ
cord-022053-idft1p6d	67	16	several	several	JJ
cord-022053-idft1p6d	67	17	well	well	RB
cord-022053-idft1p6d	67	18	-	-	HYPH
cord-022053-idft1p6d	67	19	characterized	characterize	VBN
cord-022053-idft1p6d	67	20	difficulties	difficulty	NNS
cord-022053-idft1p6d	67	21	discriminating	discriminate	VBG
cord-022053-idft1p6d	67	22	certain	certain	JJ
cord-022053-idft1p6d	67	23	species	specie	NNS
cord-022053-idft1p6d	67	24	and	and	CC
cord-022053-idft1p6d	67	25	complexes	complex	NNS
cord-022053-idft1p6d	67	26	,	,	,
cord-022053-idft1p6d	67	27	including	include	VBG
cord-022053-idft1p6d	67	28	Streptococcus	streptococcus	NN
cord-022053-idft1p6d	67	29	pneumoniae/	pneumoniae/	NN
cord-022053-idft1p6d	67	30	Streptococcus	Streptococcus	NNP
cord-022053-idft1p6d	67	31	mitis	mitis	NN
cord-022053-idft1p6d	67	32	,	,	,
cord-022053-idft1p6d	67	33	Escherichia	Escherichia	NNP
cord-022053-idft1p6d	67	34	coli	coli	NNS
cord-022053-idft1p6d	67	35	/	/	SYM
cord-022053-idft1p6d	67	36	Shigella	Shigella	NNP
cord-022053-idft1p6d	67	37	,	,	,
cord-022053-idft1p6d	67	38	and	and	CC
cord-022053-idft1p6d	67	39	members	member	NNS
cord-022053-idft1p6d	67	40	of	of	IN
cord-022053-idft1p6d	67	41	the	the	DT
cord-022053-idft1p6d	67	42	Enterobacter	Enterobacter	NNP
cord-022053-idft1p6d	67	43	cloacae	cloacae	NN
cord-022053-idft1p6d	67	44	complex	complex	NN
cord-022053-idft1p6d	67	45	.	.	.
cord-022053-idft1p6d	68	1	3	3	CD
cord-022053-idft1p6d	68	2	Finally	finally	RB
cord-022053-idft1p6d	68	3	,	,	,
cord-022053-idft1p6d	68	4	it	-PRON-	PRP
cord-022053-idft1p6d	68	5	is	be	VBZ
cord-022053-idft1p6d	68	6	important	important	JJ
cord-022053-idft1p6d	68	7	to	to	TO
cord-022053-idft1p6d	68	8	note	note	VB
cord-022053-idft1p6d	68	9	that	that	IN
cord-022053-idft1p6d	68	10	the	the	DT
cord-022053-idft1p6d	68	11	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	68	12	requires	require	VBZ
cord-022053-idft1p6d	68	13	a	a	DT
cord-022053-idft1p6d	68	14	Security	Security	NNP
cord-022053-idft1p6d	68	15	-	-	HYPH
cord-022053-idft1p6d	68	16	Relevant	Relevant	NNP
cord-022053-idft1p6d	68	17	Library	Library	NNP
cord-022053-idft1p6d	68	18	for	for	IN
cord-022053-idft1p6d	68	19	the	the	DT
cord-022053-idft1p6d	68	20	identification	identification	NN
cord-022053-idft1p6d	68	21	of	of	IN
cord-022053-idft1p6d	68	22	such	such	JJ
cord-022053-idft1p6d	68	23	organisms	organism	NNS
cord-022053-idft1p6d	68	24	as	as	IN
cord-022053-idft1p6d	68	25	Francisella	Francisella	NNP
cord-022053-idft1p6d	68	26	tularensis	tularensis	NNP
cord-022053-idft1p6d	68	27	,	,	,
cord-022053-idft1p6d	68	28	Burkholderia	Burkholderia	NNP
cord-022053-idft1p6d	68	29	pseudomallei	pseudomallei	NN
cord-022053-idft1p6d	68	30	,	,	,
cord-022053-idft1p6d	68	31	and	and	CC
cord-022053-idft1p6d	68	32	Brucella	Brucella	NNP
cord-022053-idft1p6d	68	33	spp	spp	NNS
cord-022053-idft1p6d	68	34	.	.	.
cord-022053-idft1p6d	69	1	12	12	CD
cord-022053-idft1p6d	69	2	MALDI	MALDI	NNS
cord-022053-idft1p6d	69	3	is	be	VBZ
cord-022053-idft1p6d	69	4	rapidly	rapidly	RB
cord-022053-idft1p6d	69	5	becoming	become	VBG
cord-022053-idft1p6d	69	6	the	the	DT
cord-022053-idft1p6d	69	7	method	method	NN
cord-022053-idft1p6d	69	8	of	of	IN
cord-022053-idft1p6d	69	9	choice	choice	NN
cord-022053-idft1p6d	69	10	for	for	IN
cord-022053-idft1p6d	69	11	identifying	identify	VBG
cord-022053-idft1p6d	69	12	anaerobic	anaerobic	JJ
cord-022053-idft1p6d	69	13	bacteria	bacteria	NNS
cord-022053-idft1p6d	69	14	.	.	.
cord-022053-idft1p6d	70	1	13	13	CD
cord-022053-idft1p6d	71	1	Several	several	JJ
cord-022053-idft1p6d	71	2	studies	study	NNS
cord-022053-idft1p6d	71	3	using	use	VBG
cord-022053-idft1p6d	71	4	large	large	JJ
cord-022053-idft1p6d	71	5	,	,	,
cord-022053-idft1p6d	71	6	diverse	diverse	JJ
cord-022053-idft1p6d	71	7	collections	collection	NNS
cord-022053-idft1p6d	71	8	of	of	IN
cord-022053-idft1p6d	71	9	anaerobes	anaerobe	NNS
cord-022053-idft1p6d	71	10	have	have	VBP
cord-022053-idft1p6d	71	11	demonstrated	demonstrate	VBN
cord-022053-idft1p6d	71	12	strong	strong	JJ
cord-022053-idft1p6d	71	13	performances	performance	NNS
cord-022053-idft1p6d	71	14	by	by	IN
cord-022053-idft1p6d	71	15	both	both	CC
cord-022053-idft1p6d	71	16	the	the	DT
cord-022053-idft1p6d	71	17	BioTyper	BioTyper	NNP
cord-022053-idft1p6d	71	18	and	and	CC
cord-022053-idft1p6d	71	19	the	the	DT
cord-022053-idft1p6d	71	20	Vitek	Vitek	NNP
cord-022053-idft1p6d	71	21	MS	MS	NNP
cord-022053-idft1p6d	71	22	.	.	.
cord-022053-idft1p6d	72	1	5	5	LS
cord-022053-idft1p6d	73	1	In	in	IN
cord-022053-idft1p6d	73	2	one	one	CD
cord-022053-idft1p6d	73	3	recent	recent	JJ
cord-022053-idft1p6d	73	4	multicenter	multicenter	JJ
cord-022053-idft1p6d	73	5	trial	trial	NN
cord-022053-idft1p6d	73	6	bringing	bring	VBG
cord-022053-idft1p6d	73	7	together	together	RB
cord-022053-idft1p6d	73	8	651	651	CD
cord-022053-idft1p6d	73	9	anaerobic	anaerobic	JJ
cord-022053-idft1p6d	73	10	isolates	isolate	NNS
cord-022053-idft1p6d	73	11	for	for	IN
cord-022053-idft1p6d	73	12	analysis	analysis	NN
cord-022053-idft1p6d	73	13	by	by	IN
cord-022053-idft1p6d	73	14	the	the	DT
cord-022053-idft1p6d	73	15	Vitek	Vitek	NNP
cord-022053-idft1p6d	73	16	MS	MS	NNP
cord-022053-idft1p6d	73	17	2.0	2.0	CD
cord-022053-idft1p6d	73	18	,	,	,
cord-022053-idft1p6d	73	19	91.2	91.2	CD
cord-022053-idft1p6d	73	20	%	%	NN
cord-022053-idft1p6d	73	21	of	of	IN
cord-022053-idft1p6d	73	22	the	the	DT
cord-022053-idft1p6d	73	23	isolates	isolate	NNS
cord-022053-idft1p6d	73	24	were	be	VBD
cord-022053-idft1p6d	73	25	correctly	correctly	RB
cord-022053-idft1p6d	73	26	identified	identify	VBN
cord-022053-idft1p6d	73	27	to	to	IN
cord-022053-idft1p6d	73	28	species	species	NN
cord-022053-idft1p6d	73	29	level	level	NN
cord-022053-idft1p6d	73	30	.	.	.
cord-022053-idft1p6d	74	1	14	14	CD
cord-022053-idft1p6d	75	1	The	the	DT
cord-022053-idft1p6d	75	2	most	most	RBS
cord-022053-idft1p6d	75	3	notable	notable	JJ
cord-022053-idft1p6d	75	4	difficulty	difficulty	NN
cord-022053-idft1p6d	75	5	was	be	VBD
cord-022053-idft1p6d	75	6	in	in	IN
cord-022053-idft1p6d	75	7	identifying	identify	VBG
cord-022053-idft1p6d	75	8	Fusobacterium	Fusobacterium	NNP
cord-022053-idft1p6d	75	9	nucleatum	nucleatum	NN
cord-022053-idft1p6d	75	10	(	(	-LRB-
cord-022053-idft1p6d	75	11	42.9	42.9	CD
cord-022053-idft1p6d	75	12	%	%	NN
cord-022053-idft1p6d	75	13	identified	identify	VBN
cord-022053-idft1p6d	75	14	correctly	correctly	RB
cord-022053-idft1p6d	75	15	)	)	-RRB-
cord-022053-idft1p6d	75	16	.	.	.
cord-022053-idft1p6d	76	1	The	the	DT
cord-022053-idft1p6d	76	2	system	system	NN
cord-022053-idft1p6d	76	3	also	also	RB
cord-022053-idft1p6d	76	4	showed	show	VBD
cord-022053-idft1p6d	76	5	lower	low	JJR
cord-022053-idft1p6d	76	6	performance	performance	NN
cord-022053-idft1p6d	76	7	for	for	IN
cord-022053-idft1p6d	76	8	certain	certain	JJ
cord-022053-idft1p6d	76	9	species	specie	NNS
cord-022053-idft1p6d	76	10	of	of	IN
cord-022053-idft1p6d	76	11	Bacteroides	Bacteroides	NNP
cord-022053-idft1p6d	76	12	,	,	,
cord-022053-idft1p6d	76	13	Actinomyces	Actinomyces	NNP
cord-022053-idft1p6d	76	14	,	,	,
cord-022053-idft1p6d	76	15	and	and	CC
cord-022053-idft1p6d	76	16	Prevotella	Prevotella	NNP
cord-022053-idft1p6d	76	17	.	.	.
cord-022053-idft1p6d	77	1	Similarly	similarly	RB
cord-022053-idft1p6d	77	2	,	,	,
cord-022053-idft1p6d	77	3	in	in	IN
cord-022053-idft1p6d	77	4	a	a	DT
cord-022053-idft1p6d	77	5	study	study	NN
cord-022053-idft1p6d	77	6	using	use	VBG
cord-022053-idft1p6d	77	7	the	the	DT
cord-022053-idft1p6d	77	8	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	77	9	platform	platform	NN
cord-022053-idft1p6d	77	10	to	to	TO
cord-022053-idft1p6d	77	11	identify	identify	VB
cord-022053-idft1p6d	77	12	197	197	CD
cord-022053-idft1p6d	77	13	anaerobes	anaerobe	NNS
cord-022053-idft1p6d	77	14	isolated	isolate	VBN
cord-022053-idft1p6d	77	15	from	from	IN
cord-022053-idft1p6d	77	16	blood	blood	NN
cord-022053-idft1p6d	77	17	cultures	culture	NNS
cord-022053-idft1p6d	77	18	,	,	,
cord-022053-idft1p6d	77	19	86.8	86.8	CD
cord-022053-idft1p6d	77	20	%	%	NN
cord-022053-idft1p6d	77	21	of	of	IN
cord-022053-idft1p6d	77	22	the	the	DT
cord-022053-idft1p6d	77	23	strains	strain	NNS
cord-022053-idft1p6d	77	24	were	be	VBD
cord-022053-idft1p6d	77	25	correctly	correctly	RB
cord-022053-idft1p6d	77	26	identified	identify	VBN
cord-022053-idft1p6d	77	27	to	to	IN
cord-022053-idft1p6d	77	28	the	the	DT
cord-022053-idft1p6d	77	29	species	species	NN
cord-022053-idft1p6d	77	30	level	level	NN
cord-022053-idft1p6d	77	31	(	(	-LRB-
cord-022053-idft1p6d	77	32	using	use	VBG
cord-022053-idft1p6d	77	33	a	a	DT
cord-022053-idft1p6d	77	34	score	score	NN
cord-022053-idft1p6d	77	35	of	of	IN
cord-022053-idft1p6d	77	36	2	2	CD
cord-022053-idft1p6d	77	37	)	)	-RRB-
cord-022053-idft1p6d	77	38	and	and	CC
cord-022053-idft1p6d	77	39	94.9	94.9	CD
cord-022053-idft1p6d	77	40	%	%	NN
cord-022053-idft1p6d	77	41	to	to	IN
cord-022053-idft1p6d	77	42	the	the	DT
cord-022053-idft1p6d	77	43	genus	genus	NN
cord-022053-idft1p6d	77	44	level	level	NN
cord-022053-idft1p6d	77	45	.	.	.
cord-022053-idft1p6d	78	1	15	15	CD
cord-022053-idft1p6d	79	1	Fusobacterium	Fusobacterium	NNP
cord-022053-idft1p6d	79	2	spp	spp	NNS
cord-022053-idft1p6d	79	3	.	.	.
cord-022053-idft1p6d	80	1	was	be	VBD
cord-022053-idft1p6d	80	2	again	again	RB
cord-022053-idft1p6d	80	3	problematic	problematic	JJ
cord-022053-idft1p6d	80	4	,	,	,
cord-022053-idft1p6d	80	5	with	with	IN
cord-022053-idft1p6d	80	6	only	only	RB
cord-022053-idft1p6d	80	7	23	23	CD
cord-022053-idft1p6d	80	8	%	%	NN
cord-022053-idft1p6d	80	9	being	be	VBG
cord-022053-idft1p6d	80	10	correctly	correctly	RB
cord-022053-idft1p6d	80	11	identified	identify	VBN
cord-022053-idft1p6d	80	12	to	to	IN
cord-022053-idft1p6d	80	13	the	the	DT
cord-022053-idft1p6d	80	14	species	species	NN
cord-022053-idft1p6d	80	15	level	level	NN
cord-022053-idft1p6d	80	16	.	.	.
cord-022053-idft1p6d	81	1	With	with	IN
cord-022053-idft1p6d	81	2	formic	formic	JJ
cord-022053-idft1p6d	81	3	acid	acid	NN
cord-022053-idft1p6d	81	4	/	/	SYM
cord-022053-idft1p6d	81	5	ethanol	ethanol	NN
cord-022053-idft1p6d	81	6	pretreatment	pretreatment	NN
cord-022053-idft1p6d	81	7	,	,	,
cord-022053-idft1p6d	81	8	this	this	DT
cord-022053-idft1p6d	81	9	number	number	NN
cord-022053-idft1p6d	81	10	increased	increase	VBD
cord-022053-idft1p6d	81	11	to	to	IN
cord-022053-idft1p6d	81	12	76.9	76.9	CD
cord-022053-idft1p6d	81	13	%	%	NN
cord-022053-idft1p6d	81	14	.	.	.
cord-022053-idft1p6d	82	1	In	in	IN
cord-022053-idft1p6d	82	2	addition	addition	NN
cord-022053-idft1p6d	82	3	,	,	,
cord-022053-idft1p6d	82	4	20.8	20.8	CD
cord-022053-idft1p6d	82	5	%	%	NN
cord-022053-idft1p6d	82	6	of	of	IN
cord-022053-idft1p6d	82	7	the	the	DT
cord-022053-idft1p6d	82	8	non	non	JJ
cord-022053-idft1p6d	82	9	-	-	JJ
cord-022053-idft1p6d	82	10	fragilis	fragilis	JJ
cord-022053-idft1p6d	82	11	Bacteroides	Bacteroides	NNP
cord-022053-idft1p6d	82	12	spp	spp	NNS
cord-022053-idft1p6d	82	13	.	.	.
cord-022053-idft1p6d	82	14	was	be	VBD
cord-022053-idft1p6d	82	15	misidentified	misidentifie	VBN
cord-022053-idft1p6d	82	16	as	as	IN
cord-022053-idft1p6d	82	17	other	other	JJ
cord-022053-idft1p6d	82	18	Bacteroides	Bacteroides	NNP
cord-022053-idft1p6d	82	19	,	,	,
cord-022053-idft1p6d	82	20	with	with	IN
cord-022053-idft1p6d	82	21	high	high	JJ
cord-022053-idft1p6d	82	22	confidence	confidence	NN
cord-022053-idft1p6d	82	23	scores	score	NNS
cord-022053-idft1p6d	82	24	,	,	,
cord-022053-idft1p6d	82	25	and	and	CC
cord-022053-idft1p6d	82	26	only	only	RB
cord-022053-idft1p6d	82	27	52.9	52.9	CD
cord-022053-idft1p6d	82	28	%	%	NN
cord-022053-idft1p6d	82	29	of	of	IN
cord-022053-idft1p6d	82	30	the	the	DT
cord-022053-idft1p6d	82	31	gram	gram	NN
cord-022053-idft1p6d	82	32	-	-	HYPH
cord-022053-idft1p6d	82	33	positive	positive	JJ
cord-022053-idft1p6d	82	34	anaerobic	anaerobic	JJ
cord-022053-idft1p6d	82	35	cocci	coccus	NNS
cord-022053-idft1p6d	82	36	were	be	VBD
cord-022053-idft1p6d	82	37	correctly	correctly	RB
cord-022053-idft1p6d	82	38	identified	identify	VBN
cord-022053-idft1p6d	82	39	to	to	IN
cord-022053-idft1p6d	82	40	the	the	DT
cord-022053-idft1p6d	82	41	species	species	NN
cord-022053-idft1p6d	82	42	level	level	NN
cord-022053-idft1p6d	82	43	.	.	.
cord-022053-idft1p6d	83	1	The	the	DT
cord-022053-idft1p6d	83	2	latter	latter	JJ
cord-022053-idft1p6d	83	3	was	be	VBD
cord-022053-idft1p6d	83	4	mostly	mostly	RB
cord-022053-idft1p6d	83	5	a	a	DT
cord-022053-idft1p6d	83	6	function	function	NN
cord-022053-idft1p6d	83	7	of	of	IN
cord-022053-idft1p6d	83	8	poor	poor	JJ
cord-022053-idft1p6d	83	9	performance	performance	NN
cord-022053-idft1p6d	83	10	on	on	IN
cord-022053-idft1p6d	83	11	several	several	JJ
cord-022053-idft1p6d	83	12	species	specie	NNS
cord-022053-idft1p6d	83	13	of	of	IN
cord-022053-idft1p6d	83	14	Peptoniphilus	Peptoniphilus	NNP
cord-022053-idft1p6d	83	15	.	.	.
cord-022053-idft1p6d	84	1	15	15	CD
cord-022053-idft1p6d	85	1	Interestingly	interestingly	RB
cord-022053-idft1p6d	85	2	,	,	,
cord-022053-idft1p6d	85	3	in	in	IN
cord-022053-idft1p6d	85	4	a	a	DT
cord-022053-idft1p6d	85	5	dedicated	dedicated	JJ
cord-022053-idft1p6d	85	6	study	study	NN
cord-022053-idft1p6d	85	7	looking	look	VBG
cord-022053-idft1p6d	85	8	at	at	IN
cord-022053-idft1p6d	85	9	the	the	DT
cord-022053-idft1p6d	85	10	performance	performance	NN
cord-022053-idft1p6d	85	11	of	of	IN
cord-022053-idft1p6d	85	12	the	the	DT
cord-022053-idft1p6d	85	13	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	85	14	(	(	-LRB-
cord-022053-idft1p6d	85	15	2.0	2.0	CD
cord-022053-idft1p6d	85	16	)	)	-RRB-
cord-022053-idft1p6d	85	17	on	on	IN
cord-022053-idft1p6d	85	18	a	a	DT
cord-022053-idft1p6d	85	19	collection	collection	NN
cord-022053-idft1p6d	85	20	of	of	IN
cord-022053-idft1p6d	85	21	277	277	CD
cord-022053-idft1p6d	85	22	isolates	isolate	NNS
cord-022053-idft1p6d	85	23	of	of	IN
cord-022053-idft1p6d	85	24	Bacteroides	Bacteroides	NNP
cord-022053-idft1p6d	85	25	spp	spp	NNS
cord-022053-idft1p6d	85	26	.	.	.
cord-022053-idft1p6d	86	1	,	,	,
cord-022053-idft1p6d	86	2	97.5	97.5	CD
cord-022053-idft1p6d	86	3	%	%	NN
cord-022053-idft1p6d	86	4	were	be	VBD
cord-022053-idft1p6d	86	5	correctly	correctly	RB
cord-022053-idft1p6d	86	6	identified	identify	VBN
cord-022053-idft1p6d	86	7	to	to	IN
cord-022053-idft1p6d	86	8	the	the	DT
cord-022053-idft1p6d	86	9	species	species	NN
cord-022053-idft1p6d	86	10	level	level	NN
cord-022053-idft1p6d	86	11	.	.	.
cord-022053-idft1p6d	87	1	16	16	CD
cord-022053-idft1p6d	88	1	The	the	DT
cord-022053-idft1p6d	88	2	identification	identification	NN
cord-022053-idft1p6d	88	3	of	of	IN
cord-022053-idft1p6d	88	4	yeasts	yeast	NNS
cord-022053-idft1p6d	88	5	is	be	VBZ
cord-022053-idft1p6d	88	6	an	an	DT
cord-022053-idft1p6d	88	7	FDA	FDA	NNP
cord-022053-idft1p6d	88	8	-	-	HYPH
cord-022053-idft1p6d	88	9	approved	approve	VBN
cord-022053-idft1p6d	88	10	application	application	NN
cord-022053-idft1p6d	88	11	for	for	IN
cord-022053-idft1p6d	88	12	both	both	CC
cord-022053-idft1p6d	88	13	the	the	DT
cord-022053-idft1p6d	88	14	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	88	15	and	and	CC
cord-022053-idft1p6d	88	16	Vitek	Vitek	NNP
cord-022053-idft1p6d	88	17	MS	MS	NNP
cord-022053-idft1p6d	88	18	.	.	.
cord-022053-idft1p6d	89	1	Both	both	DT
cord-022053-idft1p6d	89	2	systems	system	NNS
cord-022053-idft1p6d	89	3	have	have	VBP
cord-022053-idft1p6d	89	4	demonstrated	demonstrate	VBN
cord-022053-idft1p6d	89	5	strong	strong	JJ
cord-022053-idft1p6d	89	6	performance	performance	NN
cord-022053-idft1p6d	89	7	in	in	IN
cord-022053-idft1p6d	89	8	multiple	multiple	JJ
cord-022053-idft1p6d	89	9	studies	study	NNS
cord-022053-idft1p6d	89	10	,	,	,
cord-022053-idft1p6d	89	11	reviewed	review	VBN
cord-022053-idft1p6d	89	12	by	by	IN
cord-022053-idft1p6d	89	13	Cassagne	Cassagne	NNP
cord-022053-idft1p6d	89	14	et	et	FW
cord-022053-idft1p6d	89	15	al	al	NNP
cord-022053-idft1p6d	89	16	.	.	.
cord-022053-idft1p6d	90	1	17	17	CD
cord-022053-idft1p6d	91	1	One	one	CD
cord-022053-idft1p6d	91	2	recent	recent	JJ
cord-022053-idft1p6d	91	3	study	study	NN
cord-022053-idft1p6d	91	4	with	with	IN
cord-022053-idft1p6d	91	5	the	the	DT
cord-022053-idft1p6d	91	6	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	91	7	,	,	,
cord-022053-idft1p6d	91	8	for	for	IN
cord-022053-idft1p6d	91	9	example	example	NN
cord-022053-idft1p6d	91	10	,	,	,
cord-022053-idft1p6d	91	11	used	use	VBD
cord-022053-idft1p6d	91	12	a	a	DT
cord-022053-idft1p6d	91	13	library	library	NN
cord-022053-idft1p6d	91	14	of	of	IN
cord-022053-idft1p6d	91	15	303	303	CD
cord-022053-idft1p6d	91	16	clinical	clinical	JJ
cord-022053-idft1p6d	91	17	isolates	isolate	NNS
cord-022053-idft1p6d	91	18	representing	represent	VBG
cord-022053-idft1p6d	91	19	a	a	DT
cord-022053-idft1p6d	91	20	diverse	diverse	JJ
cord-022053-idft1p6d	91	21	array	array	NN
cord-022053-idft1p6d	91	22	of	of	IN
cord-022053-idft1p6d	91	23	yeasts	yeast	NNS
cord-022053-idft1p6d	91	24	and	and	CC
cord-022053-idft1p6d	91	25	found	find	VBD
cord-022053-idft1p6d	91	26	an	an	DT
cord-022053-idft1p6d	91	27	agreement	agreement	NN
cord-022053-idft1p6d	91	28	with	with	IN
cord-022053-idft1p6d	91	29	standard	standard	JJ
cord-022053-idft1p6d	91	30	methods	method	NNS
cord-022053-idft1p6d	91	31	in	in	IN
cord-022053-idft1p6d	91	32	84.8	84.8	CD
cord-022053-idft1p6d	91	33	%	%	NN
cord-022053-idft1p6d	91	34	.	.	.
cord-022053-idft1p6d	92	1	18	18	CD
cord-022053-idft1p6d	93	1	In	in	IN
cord-022053-idft1p6d	93	2	an	an	DT
cord-022053-idft1p6d	93	3	additional	additional	JJ
cord-022053-idft1p6d	93	4	26	26	CD
cord-022053-idft1p6d	93	5	isolates	isolate	NNS
cord-022053-idft1p6d	93	6	the	the	DT
cord-022053-idft1p6d	93	7	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	93	8	returned	return	VBD
cord-022053-idft1p6d	93	9	a	a	DT
cord-022053-idft1p6d	93	10	result	result	NN
cord-022053-idft1p6d	93	11	that	that	WDT
cord-022053-idft1p6d	93	12	was	be	VBD
cord-022053-idft1p6d	93	13	confirmed	confirm	VBN
cord-022053-idft1p6d	93	14	as	as	IN
cord-022053-idft1p6d	93	15	true	true	JJ
cord-022053-idft1p6d	93	16	by	by	IN
cord-022053-idft1p6d	93	17	sequencing	sequence	VBG
cord-022053-idft1p6d	93	18	in	in	IN
cord-022053-idft1p6d	93	19	21	21	CD
cord-022053-idft1p6d	93	20	.	.	.
cord-022053-idft1p6d	94	1	The	the	DT
cord-022053-idft1p6d	94	2	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	94	3	failed	fail	VBD
cord-022053-idft1p6d	94	4	to	to	TO
cord-022053-idft1p6d	94	5	make	make	VB
cord-022053-idft1p6d	94	6	identification	identification	NN
cord-022053-idft1p6d	94	7	in	in	IN
cord-022053-idft1p6d	94	8	an	an	DT
cord-022053-idft1p6d	94	9	additional	additional	JJ
cord-022053-idft1p6d	94	10	20	20	CD
cord-022053-idft1p6d	94	11	isolates	isolate	NNS
cord-022053-idft1p6d	94	12	.	.	.
cord-022053-idft1p6d	95	1	Bader	Bader	NNP
cord-022053-idft1p6d	95	2	et	et	NNP
cord-022053-idft1p6d	95	3	al	al	NNP
cord-022053-idft1p6d	95	4	.	.	NNP
cord-022053-idft1p6d	95	5	used	use	VBD
cord-022053-idft1p6d	95	6	an	an	DT
cord-022053-idft1p6d	95	7	even	even	RB
cord-022053-idft1p6d	95	8	larger	large	JJR
cord-022053-idft1p6d	95	9	cohort	cohort	NN
cord-022053-idft1p6d	95	10	of	of	IN
cord-022053-idft1p6d	95	11	clinical	clinical	JJ
cord-022053-idft1p6d	95	12	yeast	yeast	NN
cord-022053-idft1p6d	95	13	isolates	isolate	NNS
cord-022053-idft1p6d	95	14	(	(	-LRB-
cord-022053-idft1p6d	95	15	1192	1192	CD
cord-022053-idft1p6d	95	16	)	)	-RRB-
cord-022053-idft1p6d	95	17	to	to	TO
cord-022053-idft1p6d	95	18	compare	compare	VB
cord-022053-idft1p6d	95	19	the	the	DT
cord-022053-idft1p6d	95	20	performance	performance	NN
cord-022053-idft1p6d	95	21	of	of	IN
cord-022053-idft1p6d	95	22	traditional	traditional	JJ
cord-022053-idft1p6d	95	23	methods	method	NNS
cord-022053-idft1p6d	95	24	with	with	IN
cord-022053-idft1p6d	95	25	the	the	DT
cord-022053-idft1p6d	95	26	Bruker	Bruker	NNP
cord-022053-idft1p6d	95	27	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	95	28	and	and	CC
cord-022053-idft1p6d	95	29	the	the	DT
cord-022053-idft1p6d	95	30	Vitek	Vitek	NNP
cord-022053-idft1p6d	95	31	SARAMIS	SARAMIS	NNP
cord-022053-idft1p6d	95	32	(	(	-LRB-
cord-022053-idft1p6d	95	33	research	research	NN
cord-022053-idft1p6d	95	34	use	use	NN
cord-022053-idft1p6d	95	35	only	only	RB
cord-022053-idft1p6d	95	36	database	database	NN
cord-022053-idft1p6d	95	37	)	)	-RRB-
cord-022053-idft1p6d	95	38	.	.	.
cord-022053-idft1p6d	96	1	They	-PRON-	PRP
cord-022053-idft1p6d	96	2	found	find	VBD
cord-022053-idft1p6d	96	3	an	an	DT
cord-022053-idft1p6d	96	4	overall	overall	JJ
cord-022053-idft1p6d	96	5	agreement	agreement	NN
cord-022053-idft1p6d	96	6	between	between	IN
cord-022053-idft1p6d	96	7	the	the	DT
cord-022053-idft1p6d	96	8	methods	method	NNS
cord-022053-idft1p6d	96	9	of	of	IN
cord-022053-idft1p6d	96	10	95.1	95.1	CD
cord-022053-idft1p6d	96	11	%	%	NN
cord-022053-idft1p6d	96	12	and	and	CC
cord-022053-idft1p6d	96	13	noted	note	VBD
cord-022053-idft1p6d	96	14	not	not	RB
cord-022053-idft1p6d	96	15	only	only	RB
cord-022053-idft1p6d	96	16	that	that	IN
cord-022053-idft1p6d	96	17	both	both	DT
cord-022053-idft1p6d	96	18	MALDI	MALDI	NNS
cord-022053-idft1p6d	96	19	methods	method	NNS
cord-022053-idft1p6d	96	20	were	be	VBD
cord-022053-idft1p6d	96	21	able	able	JJ
cord-022053-idft1p6d	96	22	to	to	TO
cord-022053-idft1p6d	96	23	discriminate	discriminate	VB
cord-022053-idft1p6d	96	24	species	specie	NNS
cord-022053-idft1p6d	96	25	that	that	IN
cord-022053-idft1p6d	96	26	traditional	traditional	JJ
cord-022053-idft1p6d	96	27	methods	method	NNS
cord-022053-idft1p6d	96	28	could	could	MD
cord-022053-idft1p6d	96	29	not	not	RB
cord-022053-idft1p6d	96	30	,	,	,
cord-022053-idft1p6d	96	31	but	but	CC
cord-022053-idft1p6d	96	32	that	that	IN
cord-022053-idft1p6d	96	33	the	the	DT
cord-022053-idft1p6d	96	34	savings	saving	NNS
cord-022053-idft1p6d	96	35	in	in	IN
cord-022053-idft1p6d	96	36	time	time	NN
cord-022053-idft1p6d	96	37	and	and	CC
cord-022053-idft1p6d	96	38	money	money	NN
cord-022053-idft1p6d	96	39	were	be	VBD
cord-022053-idft1p6d	96	40	substantial	substantial	JJ
cord-022053-idft1p6d	96	41	.	.	.
cord-022053-idft1p6d	97	1	19	19	CD
cord-022053-idft1p6d	98	1	More	more	RBR
cord-022053-idft1p6d	98	2	recently	recently	RB
cord-022053-idft1p6d	98	3	,	,	,
cord-022053-idft1p6d	98	4	Chao	Chao	NNP
cord-022053-idft1p6d	98	5	et	et	NNP
cord-022053-idft1p6d	98	6	al	al	NNP
cord-022053-idft1p6d	98	7	.	.	.
cord-022053-idft1p6d	98	8	analyzed	analyze	VBD
cord-022053-idft1p6d	98	9	a	a	DT
cord-022053-idft1p6d	98	10	collection	collection	NN
cord-022053-idft1p6d	98	11	of	of	IN
cord-022053-idft1p6d	98	12	200	200	CD
cord-022053-idft1p6d	98	13	clinical	clinical	JJ
cord-022053-idft1p6d	98	14	yeast	yeast	NN
cord-022053-idft1p6d	98	15	isolates	isolate	NNS
cord-022053-idft1p6d	98	16	with	with	IN
cord-022053-idft1p6d	98	17	both	both	CC
cord-022053-idft1p6d	98	18	the	the	DT
cord-022053-idft1p6d	98	19	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	98	20	and	and	CC
cord-022053-idft1p6d	98	21	the	the	DT
cord-022053-idft1p6d	98	22	Vitek	Vitek	NNP
cord-022053-idft1p6d	98	23	MS	MS	NNP
cord-022053-idft1p6d	98	24	.	.	.
cord-022053-idft1p6d	99	1	20	20	CD
cord-022053-idft1p6d	100	1	They	-PRON-	PRP
cord-022053-idft1p6d	100	2	found	find	VBD
cord-022053-idft1p6d	100	3	that	that	IN
cord-022053-idft1p6d	100	4	the	the	DT
cord-022053-idft1p6d	100	5	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	100	6	slightly	slightly	RB
cord-022053-idft1p6d	100	7	outperformed	outperform	VBD
cord-022053-idft1p6d	100	8	the	the	DT
cord-022053-idft1p6d	100	9	Vitek	Vitek	NNP
cord-022053-idft1p6d	100	10	MS	MS	NNP
cord-022053-idft1p6d	100	11	(	(	-LRB-
cord-022053-idft1p6d	100	12	92.5	92.5	CD
cord-022053-idft1p6d	100	13	%	%	NN
cord-022053-idft1p6d	100	14	vs	vs	IN
cord-022053-idft1p6d	100	15	79.5	79.5	CD
cord-022053-idft1p6d	100	16	%	%	NN
cord-022053-idft1p6d	100	17	correctly	correctly	RB
cord-022053-idft1p6d	100	18	identified	identify	VBN
cord-022053-idft1p6d	100	19	to	to	IN
cord-022053-idft1p6d	100	20	the	the	DT
cord-022053-idft1p6d	100	21	species	specie	NNS
cord-022053-idft1p6d	100	22	or	or	CC
cord-022053-idft1p6d	100	23	complex	complex	JJ
cord-022053-idft1p6d	100	24	level	level	NN
cord-022053-idft1p6d	100	25	)	)	-RRB-
cord-022053-idft1p6d	100	26	.	.	.
cord-022053-idft1p6d	101	1	This	this	DT
cord-022053-idft1p6d	101	2	compared	compare	VBN
cord-022053-idft1p6d	101	3	with	with	IN
cord-022053-idft1p6d	101	4	rates	rate	NNS
cord-022053-idft1p6d	101	5	of	of	IN
cord-022053-idft1p6d	101	6	89	89	CD
cord-022053-idft1p6d	101	7	%	%	NN
cord-022053-idft1p6d	101	8	and	and	CC
cord-022053-idft1p6d	101	9	74	74	CD
cord-022053-idft1p6d	101	10	%	%	NN
cord-022053-idft1p6d	101	11	for	for	IN
cord-022053-idft1p6d	101	12	two	two	CD
cord-022053-idft1p6d	101	13	common	common	JJ
cord-022053-idft1p6d	101	14	phenotypic	phenotypic	JJ
cord-022053-idft1p6d	101	15	methods	method	NNS
cord-022053-idft1p6d	101	16	(	(	-LRB-
cord-022053-idft1p6d	101	17	Phoenix	Phoenix	NNP
cord-022053-idft1p6d	101	18	100	100	CD
cord-022053-idft1p6d	101	19	YBC	YBC	NNP
cord-022053-idft1p6d	101	20	and	and	CC
cord-022053-idft1p6d	101	21	the	the	DT
cord-022053-idft1p6d	101	22	Vitek	Vitek	NNP
cord-022053-idft1p6d	101	23	2	2	CD
cord-022053-idft1p6d	101	24	Yeast	Yeast	NNP
cord-022053-idft1p6d	101	25	ID	ID	NNP
cord-022053-idft1p6d	101	26	,	,	,
cord-022053-idft1p6d	101	27	respectively	respectively	RB
cord-022053-idft1p6d	101	28	)	)	-RRB-
cord-022053-idft1p6d	101	29	.	.	.
cord-022053-idft1p6d	102	1	This	this	DT
cord-022053-idft1p6d	102	2	trend	trend	NN
cord-022053-idft1p6d	102	3	was	be	VBD
cord-022053-idft1p6d	102	4	also	also	RB
cord-022053-idft1p6d	102	5	observed	observe	VBN
cord-022053-idft1p6d	102	6	by	by	IN
cord-022053-idft1p6d	102	7	Mancini	Mancini	NNP
cord-022053-idft1p6d	102	8	et	et	NNP
cord-022053-idft1p6d	102	9	al	al	NNP
cord-022053-idft1p6d	102	10	.	.	NNP
cord-022053-idft1p6d	102	11	,	,	,
cord-022053-idft1p6d	102	12	who	who	WP
cord-022053-idft1p6d	102	13	used	use	VBD
cord-022053-idft1p6d	102	14	a	a	DT
cord-022053-idft1p6d	102	15	collection	collection	NN
cord-022053-idft1p6d	102	16	of	of	IN
cord-022053-idft1p6d	102	17	197	197	CD
cord-022053-idft1p6d	102	18	clinical	clinical	JJ
cord-022053-idft1p6d	102	19	yeast	yeast	NN
cord-022053-idft1p6d	102	20	isolates	isolate	NNS
cord-022053-idft1p6d	102	21	,	,	,
cord-022053-idft1p6d	102	22	which	which	WDT
cord-022053-idft1p6d	102	23	included	include	VBD
cord-022053-idft1p6d	102	24	157	157	CD
cord-022053-idft1p6d	102	25	Candida	Candida	NNP
cord-022053-idft1p6d	102	26	or	or	CC
cord-022053-idft1p6d	102	27	related	relate	VBN
cord-022053-idft1p6d	102	28	species	specie	NNS
cord-022053-idft1p6d	102	29	and	and	CC
cord-022053-idft1p6d	102	30	40	40	CD
cord-022053-idft1p6d	102	31	non	non	JJ
cord-022053-idft1p6d	102	32	-	-	JJ
cord-022053-idft1p6d	102	33	Candida	candida	JJ
cord-022053-idft1p6d	102	34	species	specie	NNS
cord-022053-idft1p6d	102	35	.	.	.
cord-022053-idft1p6d	103	1	They	-PRON-	PRP
cord-022053-idft1p6d	103	2	found	find	VBD
cord-022053-idft1p6d	103	3	that	that	IN
cord-022053-idft1p6d	103	4	the	the	DT
cord-022053-idft1p6d	103	5	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	103	6	identified	identify	VBD
cord-022053-idft1p6d	103	7	89.8	89.8	CD
cord-022053-idft1p6d	103	8	%	%	NN
cord-022053-idft1p6d	103	9	of	of	IN
cord-022053-idft1p6d	103	10	isolates	isolate	NNS
cord-022053-idft1p6d	103	11	,	,	,
cord-022053-idft1p6d	103	12	whereas	whereas	IN
cord-022053-idft1p6d	103	13	the	the	DT
cord-022053-idft1p6d	103	14	Vitek	Vitek	NNP
cord-022053-idft1p6d	103	15	MS	MS	NNP
cord-022053-idft1p6d	103	16	identified	identify	VBD
cord-022053-idft1p6d	103	17	84.3	84.3	CD
cord-022053-idft1p6d	103	18	%	%	NN
cord-022053-idft1p6d	103	19	using	use	VBG
cord-022053-idft1p6d	103	20	the	the	DT
cord-022053-idft1p6d	103	21	standard	standard	NN
cord-022053-idft1p6d	103	22	commercially	commercially	RB
cord-022053-idft1p6d	103	23	available	available	JJ
cord-022053-idft1p6d	103	24	database	database	NN
cord-022053-idft1p6d	103	25	.	.	.
cord-022053-idft1p6d	104	1	Importantly	importantly	RB
cord-022053-idft1p6d	104	2	,	,	,
cord-022053-idft1p6d	104	3	the	the	DT
cord-022053-idft1p6d	104	4	Vitek	Vitek	NNP
cord-022053-idft1p6d	104	5	MS	MS	NNP
cord-022053-idft1p6d	104	6	had	have	VBD
cord-022053-idft1p6d	104	7	a	a	DT
cord-022053-idft1p6d	104	8	much	much	RB
cord-022053-idft1p6d	104	9	higher	high	JJR
cord-022053-idft1p6d	104	10	rate	rate	NN
cord-022053-idft1p6d	104	11	of	of	IN
cord-022053-idft1p6d	104	12	misidentification	misidentification	NN
cord-022053-idft1p6d	104	13	(	(	-LRB-
cord-022053-idft1p6d	104	14	12.1	12.1	CD
cord-022053-idft1p6d	104	15	%	%	NN
cord-022053-idft1p6d	104	16	vs	vs	IN
cord-022053-idft1p6d	104	17	1	1	CD
cord-022053-idft1p6d	104	18	%	%	NN
cord-022053-idft1p6d	104	19	)	)	-RRB-
cord-022053-idft1p6d	104	20	.	.	.
cord-022053-idft1p6d	105	1	21	21	CD
cord-022053-idft1p6d	106	1	In	in	IN
cord-022053-idft1p6d	106	2	general	general	JJ
cord-022053-idft1p6d	106	3	,	,	,
cord-022053-idft1p6d	106	4	it	-PRON-	PRP
cord-022053-idft1p6d	106	5	has	have	VBZ
cord-022053-idft1p6d	106	6	been	be	VBN
cord-022053-idft1p6d	106	7	found	find	VBN
cord-022053-idft1p6d	106	8	that	that	IN
cord-022053-idft1p6d	106	9	a	a	DT
cord-022053-idft1p6d	106	10	formic	formic	JJ
cord-022053-idft1p6d	106	11	acid	acid	NN
cord-022053-idft1p6d	106	12	/	/	SYM
cord-022053-idft1p6d	106	13	ethanol	ethanol	NN
cord-022053-idft1p6d	106	14	on	on	IN
cord-022053-idft1p6d	106	15	the	the	DT
cord-022053-idft1p6d	106	16	organism	organism	NN
cord-022053-idft1p6d	106	17	in	in	IN
cord-022053-idft1p6d	106	18	question	question	NN
cord-022053-idft1p6d	106	19	)	)	-RRB-
cord-022053-idft1p6d	106	20	.	.	.
cord-022053-idft1p6d	107	1	5	5	LS
cord-022053-idft1p6d	107	2	,	,	,
cord-022053-idft1p6d	107	3	7	7	CD
cord-022053-idft1p6d	107	4	Other	other	JJ
cord-022053-idft1p6d	107	5	benefits	benefit	NNS
cord-022053-idft1p6d	107	6	to	to	IN
cord-022053-idft1p6d	107	7	MALDI	MALDI	NNS
cord-022053-idft1p6d	107	8	in	in	IN
cord-022053-idft1p6d	107	9	routine	routine	JJ
cord-022053-idft1p6d	107	10	clinical	clinical	JJ
cord-022053-idft1p6d	107	11	microbiology	microbiology	NN
cord-022053-idft1p6d	107	12	include	include	VBP
cord-022053-idft1p6d	107	13	low	low	JJ
cord-022053-idft1p6d	107	14	costs	cost	NNS
cord-022053-idft1p6d	107	15	of	of	IN
cord-022053-idft1p6d	107	16	reagents	reagent	NNS
cord-022053-idft1p6d	107	17	and	and	CC
cord-022053-idft1p6d	107	18	less	less	JJR
cord-022053-idft1p6d	107	19	production	production	NN
cord-022053-idft1p6d	107	20	of	of	IN
cord-022053-idft1p6d	107	21	waste	waste	NN
cord-022053-idft1p6d	107	22	materials	material	NNS
cord-022053-idft1p6d	107	23	(	(	-LRB-
cord-022053-idft1p6d	107	24	reduced	reduce	VBN
cord-022053-idft1p6d	107	25	consumables	consumable	NNS
cord-022053-idft1p6d	107	26	)	)	-RRB-
cord-022053-idft1p6d	107	27	.	.	.
cord-022053-idft1p6d	108	1	There	there	EX
cord-022053-idft1p6d	108	2	are	be	VBP
cord-022053-idft1p6d	108	3	a	a	DT
cord-022053-idft1p6d	108	4	few	few	JJ
cord-022053-idft1p6d	108	5	shortcomings	shortcoming	NNS
cord-022053-idft1p6d	108	6	of	of	IN
cord-022053-idft1p6d	108	7	this	this	DT
cord-022053-idft1p6d	108	8	technology	technology	NN
cord-022053-idft1p6d	108	9	.	.	.
cord-022053-idft1p6d	109	1	For	for	IN
cord-022053-idft1p6d	109	2	the	the	DT
cord-022053-idft1p6d	109	3	most	most	JJS
cord-022053-idft1p6d	109	4	part	part	NN
cord-022053-idft1p6d	109	5	,	,	,
cord-022053-idft1p6d	109	6	MALDI	MALDI	NNP
cord-022053-idft1p6d	109	7	is	be	VBZ
cord-022053-idft1p6d	109	8	limited	limit	VBN
cord-022053-idft1p6d	109	9	to	to	IN
cord-022053-idft1p6d	109	10	cultured	cultured	JJ
cord-022053-idft1p6d	109	11	isolates	isolate	NNS
cord-022053-idft1p6d	109	12	,	,	,
cord-022053-idft1p6d	109	13	so	so	IN
cord-022053-idft1p6d	109	14	although	although	IN
cord-022053-idft1p6d	109	15	it	-PRON-	PRP
cord-022053-idft1p6d	109	16	offers	offer	VBZ
cord-022053-idft1p6d	109	17	tremendous	tremendous	JJ
cord-022053-idft1p6d	109	18	TAT	tat	NN
cord-022053-idft1p6d	109	19	advantages	advantage	NNS
cord-022053-idft1p6d	109	20	it	-PRON-	PRP
cord-022053-idft1p6d	109	21	is	be	VBZ
cord-022053-idft1p6d	109	22	inherently	inherently	RB
cord-022053-idft1p6d	109	23	limited	limit	VBN
cord-022053-idft1p6d	109	24	by	by	IN
cord-022053-idft1p6d	109	25	the	the	DT
cord-022053-idft1p6d	109	26	time	time	NN
cord-022053-idft1p6d	109	27	to	to	IN
cord-022053-idft1p6d	109	28	growth	growth	NN
cord-022053-idft1p6d	109	29	of	of	IN
cord-022053-idft1p6d	109	30	the	the	DT
cord-022053-idft1p6d	109	31	organism	organism	NN
cord-022053-idft1p6d	109	32	.	.	.
cord-022053-idft1p6d	110	1	Sparse	sparse	JJ
cord-022053-idft1p6d	110	2	database	database	NN
cord-022053-idft1p6d	110	3	coverage	coverage	NN
cord-022053-idft1p6d	110	4	over	over	IN
cord-022053-idft1p6d	110	5	certain	certain	JJ
cord-022053-idft1p6d	110	6	phyla	phylum	NNS
cord-022053-idft1p6d	110	7	(	(	-LRB-
cord-022053-idft1p6d	110	8	e.g.	e.g.	RB
cord-022053-idft1p6d	110	9	,	,	,
cord-022053-idft1p6d	110	10	filamentous	filamentous	JJ
cord-022053-idft1p6d	110	11	fungi	fungus	NNS
cord-022053-idft1p6d	110	12	,	,	,
cord-022053-idft1p6d	110	13	some	some	DT
cord-022053-idft1p6d	110	14	anaerobes	anaerobe	NNS
cord-022053-idft1p6d	110	15	)	)	-RRB-
cord-022053-idft1p6d	110	16	presents	present	VBZ
cord-022053-idft1p6d	110	17	an	an	DT
cord-022053-idft1p6d	110	18	issue	issue	NN
cord-022053-idft1p6d	110	19	in	in	IN
cord-022053-idft1p6d	110	20	some	some	DT
cord-022053-idft1p6d	110	21	cases	case	NNS
cord-022053-idft1p6d	110	22	,	,	,
cord-022053-idft1p6d	110	23	although	although	IN
cord-022053-idft1p6d	110	24	commercially	commercially	RB
cord-022053-idft1p6d	110	25	available	available	JJ
cord-022053-idft1p6d	110	26	libraries	library	NNS
cord-022053-idft1p6d	110	27	continue	continue	VBP
cord-022053-idft1p6d	110	28	to	to	TO
cord-022053-idft1p6d	110	29	be	be	VB
cord-022053-idft1p6d	110	30	expanded	expand	VBN
cord-022053-idft1p6d	110	31	.	.	.
cord-022053-idft1p6d	111	1	Another	another	DT
cord-022053-idft1p6d	111	2	major	major	JJ
cord-022053-idft1p6d	111	3	caveat	caveat	NN
cord-022053-idft1p6d	111	4	of	of	IN
cord-022053-idft1p6d	111	5	MALDI	MALDI	NNP
cord-022053-idft1p6d	111	6	is	be	VBZ
cord-022053-idft1p6d	111	7	that	that	IN
cord-022053-idft1p6d	111	8	it	-PRON-	PRP
cord-022053-idft1p6d	111	9	is	be	VBZ
cord-022053-idft1p6d	111	10	not	not	RB
cord-022053-idft1p6d	111	11	yet	yet	RB
cord-022053-idft1p6d	111	12	a	a	DT
cord-022053-idft1p6d	111	13	practical	practical	JJ
cord-022053-idft1p6d	111	14	method	method	NN
cord-022053-idft1p6d	111	15	for	for	IN
cord-022053-idft1p6d	111	16	assessing	assess	VBG
cord-022053-idft1p6d	111	17	antibiotic	antibiotic	JJ
cord-022053-idft1p6d	111	18	resistance	resistance	NN
cord-022053-idft1p6d	111	19	.	.	.
cord-022053-idft1p6d	112	1	Direct	direct	JJ
cord-022053-idft1p6d	112	2	detection	detection	NN
cord-022053-idft1p6d	112	3	of	of	IN
cord-022053-idft1p6d	112	4	resistance	resistance	NN
cord-022053-idft1p6d	112	5	-	-	HYPH
cord-022053-idft1p6d	112	6	conferring	confer	VBG
cord-022053-idft1p6d	112	7	enzymes	enzyme	NNS
cord-022053-idft1p6d	112	8	is	be	VBZ
cord-022053-idft1p6d	112	9	not	not	RB
cord-022053-idft1p6d	112	10	practical	practical	JJ
cord-022053-idft1p6d	112	11	within	within	IN
cord-022053-idft1p6d	112	12	the	the	DT
cord-022053-idft1p6d	112	13	assay	assay	NN
cord-022053-idft1p6d	112	14	's	's	POS
cord-022053-idft1p6d	112	15	limits	limit	NNS
cord-022053-idft1p6d	112	16	of	of	IN
cord-022053-idft1p6d	112	17	detection	detection	NN
cord-022053-idft1p6d	112	18	;	;	:
cord-022053-idft1p6d	112	19	however	however	RB
cord-022053-idft1p6d	112	20	,	,	,
cord-022053-idft1p6d	112	21	some	some	DT
cord-022053-idft1p6d	112	22	promising	promising	JJ
cord-022053-idft1p6d	112	23	studies	study	NNS
cord-022053-idft1p6d	112	24	have	have	VBP
cord-022053-idft1p6d	112	25	been	be	VBN
cord-022053-idft1p6d	112	26	published	publish	VBN
cord-022053-idft1p6d	112	27	looking	look	VBG
cord-022053-idft1p6d	112	28	at	at	IN
cord-022053-idft1p6d	112	29	the	the	DT
cord-022053-idft1p6d	112	30	ability	ability	NN
cord-022053-idft1p6d	112	31	of	of	IN
cord-022053-idft1p6d	112	32	MALDI	MALDI	NNS
cord-022053-idft1p6d	112	33	to	to	TO
cord-022053-idft1p6d	112	34	detect	detect	VB
cord-022053-idft1p6d	112	35	breakdown	breakdown	NN
cord-022053-idft1p6d	112	36	products	product	NNS
cord-022053-idft1p6d	112	37	after	after	IN
cord-022053-idft1p6d	112	38	incubation	incubation	NN
cord-022053-idft1p6d	112	39	in	in	IN
cord-022053-idft1p6d	112	40	the	the	DT
cord-022053-idft1p6d	112	41	presence	presence	NN
cord-022053-idft1p6d	112	42	of	of	IN
cord-022053-idft1p6d	112	43	antibiotic	antibiotic	NN
cord-022053-idft1p6d	112	44	.	.	.
cord-022053-idft1p6d	113	1	3	3	LS
cord-022053-idft1p6d	114	1	However	however	RB
cord-022053-idft1p6d	114	2	,	,	,
cord-022053-idft1p6d	114	3	resistance	resistance	NN
cord-022053-idft1p6d	114	4	testing	testing	NN
cord-022053-idft1p6d	114	5	is	be	VBZ
cord-022053-idft1p6d	114	6	unlikely	unlikely	JJ
cord-022053-idft1p6d	114	7	to	to	TO
cord-022053-idft1p6d	114	8	be	be	VB
cord-022053-idft1p6d	114	9	incorporated	incorporate	VBN
cord-022053-idft1p6d	114	10	into	into	IN
cord-022053-idft1p6d	114	11	a	a	DT
cord-022053-idft1p6d	114	12	standard	standard	JJ
cord-022053-idft1p6d	114	13	MALDI	MALDI	NNP
cord-022053-idft1p6d	114	14	microbial	microbial	JJ
cord-022053-idft1p6d	114	15	identification	identification	NN
cord-022053-idft1p6d	114	16	platform	platform	NN
cord-022053-idft1p6d	114	17	in	in	IN
cord-022053-idft1p6d	114	18	the	the	DT
cord-022053-idft1p6d	114	19	near	near	JJ
cord-022053-idft1p6d	114	20	future	future	NN
cord-022053-idft1p6d	114	21	.	.	.
cord-022053-idft1p6d	115	1	Mass	mass	NN
cord-022053-idft1p6d	115	2	spectroscopy	spectroscopy	NN
cord-022053-idft1p6d	115	3	has	have	VBZ
cord-022053-idft1p6d	115	4	been	be	VBN
cord-022053-idft1p6d	115	5	applied	apply	VBN
cord-022053-idft1p6d	115	6	to	to	IN
cord-022053-idft1p6d	115	7	human	human	JJ
cord-022053-idft1p6d	115	8	tissues	tissue	NNS
cord-022053-idft1p6d	115	9	,	,	,
cord-022053-idft1p6d	115	10	including	include	VBG
cord-022053-idft1p6d	115	11	FFPE	FFPE	NNP
cord-022053-idft1p6d	115	12	,	,	,
cord-022053-idft1p6d	115	13	for	for	IN
cord-022053-idft1p6d	115	14	a	a	DT
cord-022053-idft1p6d	115	15	variety	variety	NN
cord-022053-idft1p6d	115	16	of	of	IN
cord-022053-idft1p6d	115	17	purposes	purpose	NNS
cord-022053-idft1p6d	115	18	,	,	,
cord-022053-idft1p6d	115	19	but	but	CC
cord-022053-idft1p6d	115	20	,	,	,
cord-022053-idft1p6d	115	21	to	to	IN
cord-022053-idft1p6d	115	22	date	date	NN
cord-022053-idft1p6d	115	23	,	,	,
cord-022053-idft1p6d	115	24	there	there	EX
cord-022053-idft1p6d	115	25	is	be	VBZ
cord-022053-idft1p6d	115	26	not	not	RB
cord-022053-idft1p6d	115	27	a	a	DT
cord-022053-idft1p6d	115	28	commercially	commercially	RB
cord-022053-idft1p6d	115	29	available	available	JJ
cord-022053-idft1p6d	115	30	or	or	CC
cord-022053-idft1p6d	115	31	routine	routine	JJ
cord-022053-idft1p6d	115	32	method	method	NN
cord-022053-idft1p6d	115	33	for	for	IN
cord-022053-idft1p6d	115	34	using	use	VBG
cord-022053-idft1p6d	115	35	MS	MS	NNP
cord-022053-idft1p6d	115	36	in	in	IN
cord-022053-idft1p6d	115	37	the	the	DT
cord-022053-idft1p6d	115	38	detection	detection	NN
cord-022053-idft1p6d	115	39	of	of	IN
cord-022053-idft1p6d	115	40	organisms	organism	NNS
cord-022053-idft1p6d	115	41	in	in	IN
cord-022053-idft1p6d	115	42	FFPE	FFPE	NNP
cord-022053-idft1p6d	115	43	.	.	.
cord-022053-idft1p6d	116	1	44	44	CD
cord-022053-idft1p6d	116	2	,	,	,
cord-022053-idft1p6d	116	3	45	45	CD
cord-022053-idft1p6d	117	1	With	with	IN
cord-022053-idft1p6d	117	2	the	the	DT
cord-022053-idft1p6d	117	3	advent	advent	NN
cord-022053-idft1p6d	117	4	of	of	IN
cord-022053-idft1p6d	117	5	rapid	rapid	JJ
cord-022053-idft1p6d	117	6	and	and	CC
cord-022053-idft1p6d	117	7	inexpensive	inexpensive	JJ
cord-022053-idft1p6d	117	8	nucleic	nucleic	JJ
cord-022053-idft1p6d	117	9	acid	acid	NN
cord-022053-idft1p6d	117	10	methods	method	NNS
cord-022053-idft1p6d	117	11	for	for	IN
cord-022053-idft1p6d	117	12	FFPE	FFPE	NNP
cord-022053-idft1p6d	117	13	,	,	,
cord-022053-idft1p6d	117	14	this	this	DT
cord-022053-idft1p6d	117	15	field	field	NN
cord-022053-idft1p6d	117	16	largely	largely	RB
cord-022053-idft1p6d	117	17	lies	lie	VBZ
cord-022053-idft1p6d	117	18	dormant	dormant	JJ
cord-022053-idft1p6d	117	19	,	,	,
cord-022053-idft1p6d	117	20	although	although	IN
cord-022053-idft1p6d	117	21	incredible	incredible	JJ
cord-022053-idft1p6d	117	22	potential	potential	NN
cord-022053-idft1p6d	117	23	for	for	IN
cord-022053-idft1p6d	117	24	detection	detection	NN
cord-022053-idft1p6d	117	25	and	and	CC
cord-022053-idft1p6d	117	26	other	other	JJ
cord-022053-idft1p6d	117	27	data	data	NN
cord-022053-idft1p6d	117	28	extraction	extraction	NN
cord-022053-idft1p6d	117	29	from	from	IN
cord-022053-idft1p6d	117	30	FFPE	FFPE	NNP
cord-022053-idft1p6d	117	31	through	through	IN
cord-022053-idft1p6d	117	32	MS	MS	NNP
cord-022053-idft1p6d	117	33	may	may	MD
cord-022053-idft1p6d	117	34	be	be	VB
cord-022053-idft1p6d	117	35	possible	possible	JJ
cord-022053-idft1p6d	117	36	in	in	IN
cord-022053-idft1p6d	117	37	the	the	DT
cord-022053-idft1p6d	117	38	future	future	NN
cord-022053-idft1p6d	117	39	.	.	.
cord-022053-idft1p6d	118	1	For	for	IN
cord-022053-idft1p6d	118	2	more	more	JJR
cord-022053-idft1p6d	118	3	than	than	IN
cord-022053-idft1p6d	118	4	30	30	CD
cord-022053-idft1p6d	118	5	years	year	NNS
cord-022053-idft1p6d	118	6	,	,	,
cord-022053-idft1p6d	118	7	a	a	DT
cord-022053-idft1p6d	118	8	wide	wide	JJ
cord-022053-idft1p6d	118	9	spectrum	spectrum	NN
cord-022053-idft1p6d	118	10	of	of	IN
cord-022053-idft1p6d	118	11	assays	assay	NNS
cord-022053-idft1p6d	118	12	based	base	VBN
cord-022053-idft1p6d	118	13	on	on	IN
cord-022053-idft1p6d	118	14	the	the	DT
cord-022053-idft1p6d	118	15	detection	detection	NN
cord-022053-idft1p6d	118	16	of	of	IN
cord-022053-idft1p6d	118	17	nucleic	nucleic	JJ
cord-022053-idft1p6d	118	18	acids	acid	NNS
cord-022053-idft1p6d	118	19	has	have	VBZ
cord-022053-idft1p6d	118	20	been	be	VBN
cord-022053-idft1p6d	118	21	developed	develop	VBN
cord-022053-idft1p6d	118	22	for	for	IN
cord-022053-idft1p6d	118	23	the	the	DT
cord-022053-idft1p6d	118	24	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	118	25	of	of	IN
cord-022053-idft1p6d	118	26	infectious	infectious	JJ
cord-022053-idft1p6d	118	27	disease	disease	NN
cord-022053-idft1p6d	118	28	.	.	.
cord-022053-idft1p6d	119	1	They	-PRON-	PRP
cord-022053-idft1p6d	119	2	range	range	VBP
cord-022053-idft1p6d	119	3	from	from	IN
cord-022053-idft1p6d	119	4	simple	simple	JJ
cord-022053-idft1p6d	119	5	probes	probe	NNS
cord-022053-idft1p6d	119	6	to	to	IN
cord-022053-idft1p6d	119	7	qualitative	qualitative	JJ
cord-022053-idft1p6d	119	8	and	and	CC
cord-022053-idft1p6d	119	9	quantitative	quantitative	JJ
cord-022053-idft1p6d	119	10	target	target	NN
cord-022053-idft1p6d	119	11	amplification	amplification	NN
cord-022053-idft1p6d	119	12	to	to	IN
cord-022053-idft1p6d	119	13	sequencing	sequencing	NN
cord-022053-idft1p6d	119	14	.	.	.
cord-022053-idft1p6d	120	1	For	for	IN
cord-022053-idft1p6d	120	2	example	example	NN
cord-022053-idft1p6d	120	3	,	,	,
cord-022053-idft1p6d	120	4	the	the	DT
cord-022053-idft1p6d	120	5	first	first	JJ
cord-022053-idft1p6d	120	6	nucleic	nucleic	JJ
cord-022053-idft1p6d	120	7	acid	acid	NN
cord-022053-idft1p6d	120	8	probe	probe	NN
cord-022053-idft1p6d	120	9	-	-	HYPH
cord-022053-idft1p6d	120	10	based	base	VBN
cord-022053-idft1p6d	120	11	assay	assay	NN
cord-022053-idft1p6d	120	12	was	be	VBD
cord-022053-idft1p6d	120	13	launched	launch	VBN
cord-022053-idft1p6d	120	14	in	in	IN
cord-022053-idft1p6d	120	15	1985	1985	CD
cord-022053-idft1p6d	120	16	to	to	TO
cord-022053-idft1p6d	120	17	test	test	VB
cord-022053-idft1p6d	120	18	for	for	IN
cord-022053-idft1p6d	120	19	legionnaires	legionnaire	NNS
cord-022053-idft1p6d	120	20	'	'	POS
cord-022053-idft1p6d	120	21	disease	disease	NN
cord-022053-idft1p6d	120	22	(	(	-LRB-
cord-022053-idft1p6d	120	23	Gen	Gen	NNP
cord-022053-idft1p6d	120	24	-	-	HYPH
cord-022053-idft1p6d	120	25	Probe	Probe	NNP
cord-022053-idft1p6d	120	26	)	)	-RRB-
cord-022053-idft1p6d	120	27	.	.	.
cord-022053-idft1p6d	121	1	Real	real	JJ
cord-022053-idft1p6d	121	2	-	-	HYPH
cord-022053-idft1p6d	121	3	time	time	NN
cord-022053-idft1p6d	121	4	platforms	platform	NNS
cord-022053-idft1p6d	121	5	,	,	,
cord-022053-idft1p6d	121	6	such	such	JJ
cord-022053-idft1p6d	121	7	as	as	IN
cord-022053-idft1p6d	121	8	the	the	DT
cord-022053-idft1p6d	121	9	Smartcycler	Smartcycler	NNP
cord-022053-idft1p6d	121	10	and	and	CC
cord-022053-idft1p6d	121	11	the	the	DT
cord-022053-idft1p6d	121	12	Lightcycler	Lightcycler	NNP
cord-022053-idft1p6d	121	13	,	,	,
cord-022053-idft1p6d	121	14	have	have	VBP
cord-022053-idft1p6d	121	15	an	an	DT
cord-022053-idft1p6d	121	16	established	establish	VBN
cord-022053-idft1p6d	121	17	place	place	NN
cord-022053-idft1p6d	121	18	in	in	IN
cord-022053-idft1p6d	121	19	both	both	DT
cord-022053-idft1p6d	121	20	detection	detection	NN
cord-022053-idft1p6d	121	21	and	and	CC
cord-022053-idft1p6d	121	22	quantification	quantification	NN
cord-022053-idft1p6d	121	23	of	of	IN
cord-022053-idft1p6d	121	24	pathogens	pathogen	NNS
cord-022053-idft1p6d	121	25	,	,	,
cord-022053-idft1p6d	121	26	although	although	IN
cord-022053-idft1p6d	121	27	the	the	DT
cord-022053-idft1p6d	121	28	major	major	JJ
cord-022053-idft1p6d	121	29	impact	impact	NN
cord-022053-idft1p6d	121	30	has	have	VBZ
cord-022053-idft1p6d	121	31	mostly	mostly	RB
cord-022053-idft1p6d	121	32	been	be	VBN
cord-022053-idft1p6d	121	33	in	in	IN
cord-022053-idft1p6d	121	34	virology	virology	NN
cord-022053-idft1p6d	121	35	,	,	,
cord-022053-idft1p6d	121	36	where	where	WRB
cord-022053-idft1p6d	121	37	the	the	DT
cord-022053-idft1p6d	121	38	nucleic	nucleic	JJ
cord-022053-idft1p6d	121	39	acid	acid	NN
cord-022053-idft1p6d	121	40	-	-	HYPH
cord-022053-idft1p6d	121	41	based	base	VBN
cord-022053-idft1p6d	121	42	techniques	technique	NNS
cord-022053-idft1p6d	121	43	were	be	VBD
cord-022053-idft1p6d	121	44	quickly	quickly	RB
cord-022053-idft1p6d	121	45	adopted	adopt	VBN
cord-022053-idft1p6d	121	46	to	to	TO
cord-022053-idft1p6d	121	47	overcome	overcome	VB
cord-022053-idft1p6d	121	48	the	the	DT
cord-022053-idft1p6d	121	49	difficulties	difficulty	NNS
cord-022053-idft1p6d	121	50	inherent	inherent	JJ
cord-022053-idft1p6d	121	51	in	in	IN
cord-022053-idft1p6d	121	52	viral	viral	JJ
cord-022053-idft1p6d	121	53	culture	culture	NN
cord-022053-idft1p6d	121	54	.	.	.
cord-022053-idft1p6d	122	1	For	for	IN
cord-022053-idft1p6d	122	2	example	example	NN
cord-022053-idft1p6d	122	3	,	,	,
cord-022053-idft1p6d	122	4	hepatitis	hepatitis	NN
cord-022053-idft1p6d	122	5	C	C	NNP
cord-022053-idft1p6d	122	6	virus	virus	NN
cord-022053-idft1p6d	122	7	(	(	-LRB-
cord-022053-idft1p6d	122	8	HCV	HCV	NNP
cord-022053-idft1p6d	122	9	)	)	-RRB-
cord-022053-idft1p6d	122	10	and	and	CC
cord-022053-idft1p6d	122	11	HIV	HIV	NNP
cord-022053-idft1p6d	122	12	viral	viral	JJ
cord-022053-idft1p6d	122	13	loads	load	NNS
cord-022053-idft1p6d	122	14	are	be	VBP
cord-022053-idft1p6d	122	15	routine	routine	JJ
cord-022053-idft1p6d	122	16	applications	application	NNS
cord-022053-idft1p6d	122	17	of	of	IN
cord-022053-idft1p6d	122	18	these	these	DT
cord-022053-idft1p6d	122	19	technologies	technology	NNS
cord-022053-idft1p6d	122	20	.	.	.
cord-022053-idft1p6d	123	1	There	there	EX
cord-022053-idft1p6d	123	2	have	have	VBP
cord-022053-idft1p6d	123	3	been	be	VBN
cord-022053-idft1p6d	123	4	a	a	DT
cord-022053-idft1p6d	123	5	number	number	NN
cord-022053-idft1p6d	123	6	of	of	IN
cord-022053-idft1p6d	123	7	newer	new	JJR
cord-022053-idft1p6d	123	8	nucleic	nucleic	JJ
cord-022053-idft1p6d	123	9	acid	acid	NN
cord-022053-idft1p6d	123	10	-	-	HYPH
cord-022053-idft1p6d	123	11	based	base	VBN
cord-022053-idft1p6d	123	12	technologies	technology	NNS
cord-022053-idft1p6d	123	13	that	that	WDT
cord-022053-idft1p6d	123	14	have	have	VBP
cord-022053-idft1p6d	123	15	had	have	VBN
cord-022053-idft1p6d	123	16	a	a	DT
cord-022053-idft1p6d	123	17	tremendous	tremendous	JJ
cord-022053-idft1p6d	123	18	impact	impact	NN
cord-022053-idft1p6d	123	19	on	on	IN
cord-022053-idft1p6d	123	20	microbial	microbial	JJ
cord-022053-idft1p6d	123	21	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	123	22	,	,	,
cord-022053-idft1p6d	123	23	many	many	JJ
cord-022053-idft1p6d	123	24	of	of	IN
cord-022053-idft1p6d	123	25	which	which	WDT
cord-022053-idft1p6d	123	26	are	be	VBP
cord-022053-idft1p6d	123	27	also	also	RB
cord-022053-idft1p6d	123	28	geared	gear	VBN
cord-022053-idft1p6d	123	29	towards	towards	IN
cord-022053-idft1p6d	123	30	bacterial	bacterial	JJ
cord-022053-idft1p6d	123	31	pathogens	pathogen	NNS
cord-022053-idft1p6d	123	32	.	.	.
cord-022053-idft1p6d	124	1	These	these	DT
cord-022053-idft1p6d	124	2	include	include	VBP
cord-022053-idft1p6d	124	3	highly	highly	RB
cord-022053-idft1p6d	124	4	sensitive	sensitive	JJ
cord-022053-idft1p6d	124	5	probes	probe	NNS
cord-022053-idft1p6d	124	6	for	for	IN
cord-022053-idft1p6d	124	7	use	use	NN
cord-022053-idft1p6d	124	8	in	in	IN
cord-022053-idft1p6d	124	9	direct	direct	JJ
cord-022053-idft1p6d	124	10	specimens	specimen	NNS
cord-022053-idft1p6d	124	11	,	,	,
cord-022053-idft1p6d	124	12	to	to	IN
cord-022053-idft1p6d	124	13	alternative	alternative	JJ
cord-022053-idft1p6d	124	14	amplification	amplification	NN
cord-022053-idft1p6d	124	15	methods	method	NNS
cord-022053-idft1p6d	124	16	,	,	,
cord-022053-idft1p6d	124	17	rapid	rapid	JJ
cord-022053-idft1p6d	124	18	assays	assay	NNS
cord-022053-idft1p6d	124	19	of	of	IN
cord-022053-idft1p6d	124	20	single	single	JJ
cord-022053-idft1p6d	124	21	targets	target	NNS
cord-022053-idft1p6d	124	22	,	,	,
cord-022053-idft1p6d	124	23	and	and	CC
cord-022053-idft1p6d	124	24	multiplexed	multiplexed	JJ
cord-022053-idft1p6d	124	25	systems	system	NNS
cord-022053-idft1p6d	124	26	that	that	WDT
cord-022053-idft1p6d	124	27	allow	allow	VBP
cord-022053-idft1p6d	124	28	for	for	IN
cord-022053-idft1p6d	124	29	the	the	DT
cord-022053-idft1p6d	124	30	detection	detection	NN
cord-022053-idft1p6d	124	31	of	of	IN
cord-022053-idft1p6d	124	32	many	many	JJ
cord-022053-idft1p6d	124	33	organisms	organism	NNS
cord-022053-idft1p6d	124	34	in	in	IN
cord-022053-idft1p6d	124	35	one	one	CD
cord-022053-idft1p6d	124	36	assay	assay	NN
cord-022053-idft1p6d	124	37	.	.	.
cord-022053-idft1p6d	125	1	Sequencing	sequencing	NN
cord-022053-idft1p6d	125	2	assays	assay	NNS
cord-022053-idft1p6d	125	3	are	be	VBP
cord-022053-idft1p6d	125	4	becoming	become	VBG
cord-022053-idft1p6d	125	5	more	more	RBR
cord-022053-idft1p6d	125	6	commonplace	commonplace	JJ
cord-022053-idft1p6d	125	7	,	,	,
cord-022053-idft1p6d	125	8	with	with	IN
cord-022053-idft1p6d	125	9	targets	target	NNS
cord-022053-idft1p6d	125	10	ranging	range	VBG
cord-022053-idft1p6d	125	11	from	from	IN
cord-022053-idft1p6d	125	12	16S	16S	NNP
cord-022053-idft1p6d	125	13	rRNA	rrna	NN
cord-022053-idft1p6d	125	14	to	to	IN
cord-022053-idft1p6d	125	15	whole	whole	JJ
cord-022053-idft1p6d	125	16	genomes	genome	NNS
cord-022053-idft1p6d	125	17	and	and	CC
cord-022053-idft1p6d	125	18	even	even	RB
cord-022053-idft1p6d	125	19	metagenomic	metagenomic	JJ
cord-022053-idft1p6d	125	20	studies	study	NNS
cord-022053-idft1p6d	125	21	looking	look	VBG
cord-022053-idft1p6d	125	22	at	at	IN
cord-022053-idft1p6d	125	23	the	the	DT
cord-022053-idft1p6d	125	24	make	make	NN
cord-022053-idft1p6d	125	25	-	-	HYPH
cord-022053-idft1p6d	125	26	up	up	NN
cord-022053-idft1p6d	125	27	of	of	IN
cord-022053-idft1p6d	125	28	complex	complex	JJ
cord-022053-idft1p6d	125	29	microbial	microbial	JJ
cord-022053-idft1p6d	125	30	ecosystems	ecosystem	NNS
cord-022053-idft1p6d	125	31	within	within	IN
cord-022053-idft1p6d	125	32	the	the	DT
cord-022053-idft1p6d	125	33	human	human	JJ
cord-022053-idft1p6d	125	34	host	host	NN
cord-022053-idft1p6d	125	35	.	.	.
cord-022053-idft1p6d	126	1	In	in	IN
cord-022053-idft1p6d	126	2	this	this	DT
cord-022053-idft1p6d	126	3	section	section	NN
cord-022053-idft1p6d	126	4	the	the	DT
cord-022053-idft1p6d	126	5	technologies	technology	NNS
cord-022053-idft1p6d	126	6	behind	behind	IN
cord-022053-idft1p6d	126	7	several	several	JJ
cord-022053-idft1p6d	126	8	of	of	IN
cord-022053-idft1p6d	126	9	the	the	DT
cord-022053-idft1p6d	126	10	most	most	RBS
cord-022053-idft1p6d	126	11	important	important	JJ
cord-022053-idft1p6d	126	12	new	new	JJ
cord-022053-idft1p6d	126	13	assays	assay	NNS
cord-022053-idft1p6d	126	14	will	will	MD
cord-022053-idft1p6d	126	15	be	be	VB
cord-022053-idft1p6d	126	16	briefly	briefly	RB
cord-022053-idft1p6d	126	17	introduced	introduce	VBN
cord-022053-idft1p6d	126	18	,	,	,
cord-022053-idft1p6d	126	19	followed	follow	VBN
cord-022053-idft1p6d	126	20	by	by	IN
cord-022053-idft1p6d	126	21	a	a	DT
cord-022053-idft1p6d	126	22	discussion	discussion	NN
cord-022053-idft1p6d	126	23	of	of	IN
cord-022053-idft1p6d	126	24	their	-PRON-	PRP$
cord-022053-idft1p6d	126	25	application	application	NN
cord-022053-idft1p6d	126	26	to	to	IN
cord-022053-idft1p6d	126	27	clinical	clinical	JJ
cord-022053-idft1p6d	126	28	syndromes	syndrome	NNS
cord-022053-idft1p6d	126	29	,	,	,
cord-022053-idft1p6d	126	30	such	such	JJ
cord-022053-idft1p6d	126	31	as	as	IN
cord-022053-idft1p6d	126	32	respiratory	respiratory	JJ
cord-022053-idft1p6d	126	33	and	and	CC
cord-022053-idft1p6d	126	34	gastrointestinal	gastrointestinal	JJ
cord-022053-idft1p6d	126	35	(	(	-LRB-
cord-022053-idft1p6d	126	36	GI	GI	NNP
cord-022053-idft1p6d	126	37	)	)	-RRB-
cord-022053-idft1p6d	126	38	disease	disease	NN
cord-022053-idft1p6d	126	39	,	,	,
cord-022053-idft1p6d	126	40	bloodstream	bloodstream	NN
cord-022053-idft1p6d	126	41	infections	infection	NNS
cord-022053-idft1p6d	126	42	,	,	,
cord-022053-idft1p6d	126	43	meningitis	meningitis	NN
cord-022053-idft1p6d	126	44	,	,	,
cord-022053-idft1p6d	126	45	and	and	CC
cord-022053-idft1p6d	126	46	reproductive	reproductive	JJ
cord-022053-idft1p6d	126	47	health	health	NN
cord-022053-idft1p6d	126	48	/	/	,
cord-022053-idft1p6d	126	49	sexually	sexually	RB
cord-022053-idft1p6d	126	50	transmitted	transmit	VBN
cord-022053-idft1p6d	126	51	disease	disease	NN
cord-022053-idft1p6d	126	52	.	.	.
cord-022053-idft1p6d	127	1	Probe	probe	NN
cord-022053-idft1p6d	127	2	hybridization	hybridization	NN
cord-022053-idft1p6d	127	3	assays	assay	NNS
cord-022053-idft1p6d	127	4	were	be	VBD
cord-022053-idft1p6d	127	5	one	one	CD
cord-022053-idft1p6d	127	6	of	of	IN
cord-022053-idft1p6d	127	7	the	the	DT
cord-022053-idft1p6d	127	8	earliest	early	JJS
cord-022053-idft1p6d	127	9	diagnostic	diagnostic	JJ
cord-022053-idft1p6d	127	10	techniques	technique	NNS
cord-022053-idft1p6d	127	11	using	use	VBG
cord-022053-idft1p6d	127	12	nucleic	nucleic	JJ
cord-022053-idft1p6d	127	13	acids	acid	NNS
cord-022053-idft1p6d	127	14	as	as	IN
cord-022053-idft1p6d	127	15	a	a	DT
cord-022053-idft1p6d	127	16	target	target	NN
cord-022053-idft1p6d	127	17	.	.	.
cord-022053-idft1p6d	128	1	The	the	DT
cord-022053-idft1p6d	128	2	most	most	RBS
cord-022053-idft1p6d	128	3	commonly	commonly	RB
cord-022053-idft1p6d	128	4	used	use	VBN
cord-022053-idft1p6d	128	5	probes	probe	NNS
cord-022053-idft1p6d	128	6	are	be	VBP
cord-022053-idft1p6d	128	7	marketed	market	VBN
cord-022053-idft1p6d	128	8	by	by	IN
cord-022053-idft1p6d	128	9	Hologic	Hologic	NNP
cord-022053-idft1p6d	128	10	Gen	Gen	NNP
cord-022053-idft1p6d	128	11	-	-	HYPH
cord-022053-idft1p6d	128	12	Probe	Probe	NNP
cord-022053-idft1p6d	128	13	Inc.	Inc.	NNP
cord-022053-idft1p6d	128	14	(	(	-LRB-
cord-022053-idft1p6d	128	15	Marlborough	Marlborough	NNP
cord-022053-idft1p6d	128	16	,	,	,
cord-022053-idft1p6d	128	17	extraction	extraction	NN
cord-022053-idft1p6d	128	18	method	method	NN
cord-022053-idft1p6d	128	19	and	and	CC
cord-022053-idft1p6d	128	20	lowered	lower	VBD
cord-022053-idft1p6d	128	21	identity	identity	NN
cord-022053-idft1p6d	128	22	cutoffs	cutoff	NNS
cord-022053-idft1p6d	128	23	(	(	-LRB-
cord-022053-idft1p6d	128	24	i.e.	i.e.	FW
cord-022053-idft1p6d	128	25	,	,	,
cord-022053-idft1p6d	128	26	1.7	1.7	CD
cord-022053-idft1p6d	128	27	on	on	IN
cord-022053-idft1p6d	128	28	the	the	DT
cord-022053-idft1p6d	128	29	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	128	30	)	)	-RRB-
cord-022053-idft1p6d	128	31	are	be	VBP
cord-022053-idft1p6d	128	32	optimal	optimal	JJ
cord-022053-idft1p6d	128	33	for	for	IN
cord-022053-idft1p6d	128	34	the	the	DT
cord-022053-idft1p6d	128	35	analysis	analysis	NN
cord-022053-idft1p6d	128	36	of	of	IN
cord-022053-idft1p6d	128	37	yeasts	yeast	NNS
cord-022053-idft1p6d	128	38	.	.	.
cord-022053-idft1p6d	129	1	22	22	CD
cord-022053-idft1p6d	130	1	Although	although	IN
cord-022053-idft1p6d	130	2	not	not	RB
cord-022053-idft1p6d	130	3	an	an	DT
cord-022053-idft1p6d	130	4	FDA	FDA	NNP
cord-022053-idft1p6d	130	5	-	-	HYPH
cord-022053-idft1p6d	130	6	approved	approve	VBN
cord-022053-idft1p6d	130	7	application	application	NN
cord-022053-idft1p6d	130	8	,	,	,
cord-022053-idft1p6d	130	9	MALDI	MALDI	NNP
cord-022053-idft1p6d	130	10	has	have	VBZ
cord-022053-idft1p6d	130	11	tremendous	tremendous	JJ
cord-022053-idft1p6d	130	12	promise	promise	NN
cord-022053-idft1p6d	130	13	for	for	IN
cord-022053-idft1p6d	130	14	the	the	DT
cord-022053-idft1p6d	130	15	identification	identification	NN
cord-022053-idft1p6d	130	16	of	of	IN
cord-022053-idft1p6d	130	17	mycobacteria	mycobacterium	NNS
cord-022053-idft1p6d	130	18	and	and	CC
cord-022053-idft1p6d	130	19	is	be	VBZ
cord-022053-idft1p6d	130	20	already	already	RB
cord-022053-idft1p6d	130	21	the	the	DT
cord-022053-idft1p6d	130	22	preferred	preferred	JJ
cord-022053-idft1p6d	130	23	identification	identification	NN
cord-022053-idft1p6d	130	24	method	method	NN
cord-022053-idft1p6d	130	25	of	of	IN
cord-022053-idft1p6d	130	26	choice	choice	NN
cord-022053-idft1p6d	130	27	for	for	IN
cord-022053-idft1p6d	130	28	these	these	DT
cord-022053-idft1p6d	130	29	organisms	organism	NNS
cord-022053-idft1p6d	130	30	in	in	IN
cord-022053-idft1p6d	130	31	some	some	DT
cord-022053-idft1p6d	130	32	clinical	clinical	JJ
cord-022053-idft1p6d	130	33	laboratories	laboratory	NNS
cord-022053-idft1p6d	130	34	.	.	.
cord-022053-idft1p6d	131	1	5	5	LS
cord-022053-idft1p6d	132	1	Caveats	caveat	NNS
cord-022053-idft1p6d	132	2	include	include	VBP
cord-022053-idft1p6d	132	3	the	the	DT
cord-022053-idft1p6d	132	4	need	need	NN
cord-022053-idft1p6d	132	5	for	for	IN
cord-022053-idft1p6d	132	6	enhanced	enhance	VBN
cord-022053-idft1p6d	132	7	sample	sample	NN
cord-022053-idft1p6d	132	8	preparation	preparation	NN
cord-022053-idft1p6d	132	9	methods	method	NNS
cord-022053-idft1p6d	132	10	for	for	IN
cord-022053-idft1p6d	132	11	efficient	efficient	JJ
cord-022053-idft1p6d	132	12	cell	cell	NN
cord-022053-idft1p6d	132	13	breakage	breakage	NN
cord-022053-idft1p6d	132	14	for	for	IN
cord-022053-idft1p6d	132	15	biosafety	biosafety	NN
cord-022053-idft1p6d	132	16	reasons	reason	NNS
cord-022053-idft1p6d	132	17	and	and	CC
cord-022053-idft1p6d	132	18	to	to	TO
cord-022053-idft1p6d	132	19	ensure	ensure	VB
cord-022053-idft1p6d	132	20	high	high	JJ
cord-022053-idft1p6d	132	21	-	-	HYPH
cord-022053-idft1p6d	132	22	quality	quality	NN
cord-022053-idft1p6d	132	23	spectra	spectrum	NNS
cord-022053-idft1p6d	132	24	.	.	.
cord-022053-idft1p6d	133	1	3	3	CD
cord-022053-idft1p6d	133	2	,	,	,
cord-022053-idft1p6d	133	3	23	23	CD
cord-022053-idft1p6d	133	4	,	,	,
cord-022053-idft1p6d	133	5	24	24	CD
cord-022053-idft1p6d	133	6	Several	several	JJ
cord-022053-idft1p6d	133	7	studies	study	NNS
cord-022053-idft1p6d	133	8	have	have	VBP
cord-022053-idft1p6d	133	9	shown	show	VBN
cord-022053-idft1p6d	133	10	promising	promising	JJ
cord-022053-idft1p6d	133	11	results	result	NNS
cord-022053-idft1p6d	133	12	.	.	.
cord-022053-idft1p6d	134	1	Using	use	VBG
cord-022053-idft1p6d	134	2	the	the	DT
cord-022053-idft1p6d	134	3	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	134	4	equipped	equip	VBN
cord-022053-idft1p6d	134	5	with	with	IN
cord-022053-idft1p6d	134	6	the	the	DT
cord-022053-idft1p6d	134	7	mycobacterial	mycobacterial	NNP
cord-022053-idft1p6d	134	8	library	library	NNP
cord-022053-idft1p6d	134	9	version	version	NN
cord-022053-idft1p6d	134	10	1.0	1.0	CD
cord-022053-idft1p6d	134	11	and	and	CC
cord-022053-idft1p6d	134	12	the	the	DT
cord-022053-idft1p6d	134	13	Vitek	Vitek	NNP
cord-022053-idft1p6d	134	14	MS	MS	NNP
cord-022053-idft1p6d	134	15	,	,	,
cord-022053-idft1p6d	134	16	84.7	84.7	CD
cord-022053-idft1p6d	134	17	%	%	NN
cord-022053-idft1p6d	134	18	to	to	IN
cord-022053-idft1p6d	134	19	93.8	93.8	CD
cord-022053-idft1p6d	134	20	%	%	NN
cord-022053-idft1p6d	134	21	of	of	IN
cord-022053-idft1p6d	134	22	isolates	isolate	NNS
cord-022053-idft1p6d	134	23	were	be	VBD
cord-022053-idft1p6d	134	24	identified	identify	VBN
cord-022053-idft1p6d	134	25	correctly	correctly	RB
cord-022053-idft1p6d	134	26	to	to	IN
cord-022053-idft1p6d	134	27	the	the	DT
cord-022053-idft1p6d	134	28	species	species	NN
cord-022053-idft1p6d	134	29	level	level	NN
cord-022053-idft1p6d	134	30	.	.	.
cord-022053-idft1p6d	135	1	24	24	CD
cord-022053-idft1p6d	135	2	,	,	,
cord-022053-idft1p6d	135	3	25	25	CD
cord-022053-idft1p6d	135	4	Bruker	Bruker	NNP
cord-022053-idft1p6d	135	5	has	have	VBZ
cord-022053-idft1p6d	135	6	subsequently	subsequently	RB
cord-022053-idft1p6d	135	7	released	release	VBN
cord-022053-idft1p6d	135	8	a	a	DT
cord-022053-idft1p6d	135	9	new	new	JJ
cord-022053-idft1p6d	135	10	version	version	NN
cord-022053-idft1p6d	135	11	of	of	IN
cord-022053-idft1p6d	135	12	the	the	DT
cord-022053-idft1p6d	135	13	mycobacterial	mycobacterial	NNP
cord-022053-idft1p6d	135	14	library	library	NNP
cord-022053-idft1p6d	135	15	,	,	,
cord-022053-idft1p6d	135	16	version	version	NN
cord-022053-idft1p6d	135	17	3.0	3.0	CD
cord-022053-idft1p6d	135	18	,	,	,
cord-022053-idft1p6d	135	19	containing	contain	VBG
cord-022053-idft1p6d	135	20	149	149	CD
cord-022053-idft1p6d	135	21	different	different	JJ
cord-022053-idft1p6d	135	22	species	specie	NNS
cord-022053-idft1p6d	135	23	.	.	.
cord-022053-idft1p6d	136	1	It	-PRON-	PRP
cord-022053-idft1p6d	136	2	reportedly	reportedly	RB
cord-022053-idft1p6d	136	3	demonstrated	demonstrate	VBD
cord-022053-idft1p6d	136	4	high	high	JJ
cord-022053-idft1p6d	136	5	performance	performance	NN
cord-022053-idft1p6d	136	6	(	(	-LRB-
cord-022053-idft1p6d	136	7	>	>	NFP
cord-022053-idft1p6d	136	8	95	95	CD
cord-022053-idft1p6d	136	9	%	%	NN
cord-022053-idft1p6d	136	10	correct	correct	JJ
cord-022053-idft1p6d	136	11	identification	identification	NN
cord-022053-idft1p6d	136	12	to	to	IN
cord-022053-idft1p6d	136	13	species	species	NN
cord-022053-idft1p6d	136	14	level	level	NN
cord-022053-idft1p6d	136	15	)	)	-RRB-
cord-022053-idft1p6d	136	16	in	in	IN
cord-022053-idft1p6d	136	17	a	a	DT
cord-022053-idft1p6d	136	18	group	group	NN
cord-022053-idft1p6d	136	19	of	of	IN
cord-022053-idft1p6d	136	20	1045	1045	CD
cord-022053-idft1p6d	136	21	clinical	clinical	JJ
cord-022053-idft1p6d	136	22	samples	sample	NNS
cord-022053-idft1p6d	136	23	.	.	.
cord-022053-idft1p6d	137	1	26	26	CD
cord-022053-idft1p6d	137	2	Version	version	NN
cord-022053-idft1p6d	137	3	3.0	3.0	CD
cord-022053-idft1p6d	137	4	of	of	IN
cord-022053-idft1p6d	137	5	the	the	DT
cord-022053-idft1p6d	137	6	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	137	7	mycobacterial	mycobacterial	NNP
cord-022053-idft1p6d	137	8	library	library	NN
cord-022053-idft1p6d	137	9	was	be	VBD
cord-022053-idft1p6d	137	10	also	also	RB
cord-022053-idft1p6d	137	11	described	describe	VBN
cord-022053-idft1p6d	137	12	by	by	IN
cord-022053-idft1p6d	137	13	Rodriguez	Rodriguez	NNP
cord-022053-idft1p6d	137	14	-	-	HYPH
cord-022053-idft1p6d	137	15	Sanchez	Sanchez	NNP
cord-022053-idft1p6d	137	16	et	et	NNP
cord-022053-idft1p6d	137	17	al	al	NNP
cord-022053-idft1p6d	137	18	.	.	NNP
cord-022053-idft1p6d	137	19	,	,	,
cord-022053-idft1p6d	137	20	who	who	WP
cord-022053-idft1p6d	137	21	found	find	VBD
cord-022053-idft1p6d	137	22	91.7	91.7	CD
cord-022053-idft1p6d	137	23	%	%	NN
cord-022053-idft1p6d	137	24	identification	identification	NN
cord-022053-idft1p6d	137	25	to	to	IN
cord-022053-idft1p6d	137	26	species	species	NN
cord-022053-idft1p6d	137	27	level	level	NN
cord-022053-idft1p6d	137	28	on	on	IN
cord-022053-idft1p6d	137	29	a	a	DT
cord-022053-idft1p6d	137	30	group	group	NN
cord-022053-idft1p6d	137	31	of	of	IN
cord-022053-idft1p6d	137	32	109	109	CD
cord-022053-idft1p6d	137	33	non	non	JJ
cord-022053-idft1p6d	137	34	-	-	JJ
cord-022053-idft1p6d	137	35	tuberculosis	tuberculosis	JJ
cord-022053-idft1p6d	137	36	mycobacteria	mycobacterium	NNS
cord-022053-idft1p6d	137	37	.	.	.
cord-022053-idft1p6d	138	1	27	27	CD
cord-022053-idft1p6d	139	1	There	there	EX
cord-022053-idft1p6d	139	2	is	be	VBZ
cord-022053-idft1p6d	139	3	a	a	DT
cord-022053-idft1p6d	139	4	great	great	JJ
cord-022053-idft1p6d	139	5	deal	deal	NN
cord-022053-idft1p6d	139	6	of	of	IN
cord-022053-idft1p6d	139	7	interest	interest	NN
cord-022053-idft1p6d	139	8	in	in	IN
cord-022053-idft1p6d	139	9	the	the	DT
cord-022053-idft1p6d	139	10	identification	identification	NN
cord-022053-idft1p6d	139	11	of	of	IN
cord-022053-idft1p6d	139	12	fungi	fungus	NNS
cord-022053-idft1p6d	139	13	other	other	JJ
cord-022053-idft1p6d	139	14	than	than	IN
cord-022053-idft1p6d	139	15	yeast	yeast	NN
cord-022053-idft1p6d	139	16	by	by	IN
cord-022053-idft1p6d	139	17	MALDI	MALDI	NNS
cord-022053-idft1p6d	139	18	,	,	,
cord-022053-idft1p6d	139	19	also	also	RB
cord-022053-idft1p6d	139	20	not	not	RB
cord-022053-idft1p6d	139	21	an	an	DT
cord-022053-idft1p6d	139	22	FDA	FDA	NNP
cord-022053-idft1p6d	139	23	-	-	HYPH
cord-022053-idft1p6d	139	24	approved	approve	VBN
cord-022053-idft1p6d	139	25	application	application	NN
cord-022053-idft1p6d	139	26	.	.	.
cord-022053-idft1p6d	140	1	Concerns	concern	NNS
cord-022053-idft1p6d	140	2	with	with	IN
cord-022053-idft1p6d	140	3	this	this	DT
cord-022053-idft1p6d	140	4	group	group	NN
cord-022053-idft1p6d	140	5	include	include	VBP
cord-022053-idft1p6d	140	6	not	not	RB
cord-022053-idft1p6d	140	7	only	only	RB
cord-022053-idft1p6d	140	8	efficient	efficient	JJ
cord-022053-idft1p6d	140	9	cell	cell	NN
cord-022053-idft1p6d	140	10	lysis	lysis	NN
cord-022053-idft1p6d	140	11	but	but	CC
cord-022053-idft1p6d	140	12	also	also	RB
cord-022053-idft1p6d	140	13	the	the	DT
cord-022053-idft1p6d	140	14	need	need	NN
cord-022053-idft1p6d	140	15	for	for	IN
cord-022053-idft1p6d	140	16	higher	high	JJR
cord-022053-idft1p6d	140	17	-	-	HYPH
cord-022053-idft1p6d	140	18	quality	quality	NN
cord-022053-idft1p6d	140	19	reference	reference	NN
cord-022053-idft1p6d	140	20	databases	database	NNS
cord-022053-idft1p6d	140	21	.	.	.
cord-022053-idft1p6d	141	1	17	17	CD
cord-022053-idft1p6d	142	1	Few	few	JJ
cord-022053-idft1p6d	142	2	studies	study	NNS
cord-022053-idft1p6d	142	3	have	have	VBP
cord-022053-idft1p6d	142	4	assessed	assess	VBN
cord-022053-idft1p6d	142	5	the	the	DT
cord-022053-idft1p6d	142	6	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	142	7	or	or	CC
cord-022053-idft1p6d	142	8	Vitek	Vitek	NNP
cord-022053-idft1p6d	142	9	MS	MS	NNP
cord-022053-idft1p6d	142	10	platforms	platform	NNS
cord-022053-idft1p6d	142	11	on	on	IN
cord-022053-idft1p6d	142	12	fungal	fungal	JJ
cord-022053-idft1p6d	142	13	isolates	isolate	NNS
cord-022053-idft1p6d	142	14	using	use	VBG
cord-022053-idft1p6d	142	15	only	only	RB
cord-022053-idft1p6d	142	16	the	the	DT
cord-022053-idft1p6d	142	17	commercially	commercially	RB
cord-022053-idft1p6d	142	18	available	available	JJ
cord-022053-idft1p6d	142	19	databases	database	NNS
cord-022053-idft1p6d	142	20	.	.	.
cord-022053-idft1p6d	143	1	Iriart	Iriart	NNP
cord-022053-idft1p6d	143	2	et	et	NNP
cord-022053-idft1p6d	143	3	al	al	NNP
cord-022053-idft1p6d	143	4	.	.	.
cord-022053-idft1p6d	143	5	analyzed	analyze	VBD
cord-022053-idft1p6d	143	6	a	a	DT
cord-022053-idft1p6d	143	7	group	group	NN
cord-022053-idft1p6d	143	8	of	of	IN
cord-022053-idft1p6d	143	9	236	236	CD
cord-022053-idft1p6d	143	10	clinical	clinical	JJ
cord-022053-idft1p6d	143	11	isolates	isolate	NNS
cord-022053-idft1p6d	143	12	with	with	IN
cord-022053-idft1p6d	143	13	the	the	DT
cord-022053-idft1p6d	143	14	Vitek	Vitek	NNP
cord-022053-idft1p6d	143	15	MS	MS	NNP
cord-022053-idft1p6d	143	16	(	(	-LRB-
cord-022053-idft1p6d	143	17	192	192	CD
cord-022053-idft1p6d	143	18	yeast	yeast	NN
cord-022053-idft1p6d	143	19	and	and	CC
cord-022053-idft1p6d	143	20	44	44	CD
cord-022053-idft1p6d	143	21	Aspergillus	aspergillus	NN
cord-022053-idft1p6d	143	22	)	)	-RRB-
cord-022053-idft1p6d	143	23	and	and	CC
cord-022053-idft1p6d	143	24	found	find	VBD
cord-022053-idft1p6d	143	25	that	that	IN
cord-022053-idft1p6d	143	26	93.2	93.2	CD
cord-022053-idft1p6d	143	27	%	%	NN
cord-022053-idft1p6d	143	28	of	of	IN
cord-022053-idft1p6d	143	29	the	the	DT
cord-022053-idft1p6d	143	30	isolates	isolate	NNS
cord-022053-idft1p6d	143	31	were	be	VBD
cord-022053-idft1p6d	143	32	correctly	correctly	RB
cord-022053-idft1p6d	143	33	identified	identify	VBN
cord-022053-idft1p6d	143	34	,	,	,
cord-022053-idft1p6d	143	35	including	include	VBG
cord-022053-idft1p6d	143	36	81.8	81.8	CD
cord-022053-idft1p6d	143	37	%	%	NN
cord-022053-idft1p6d	143	38	of	of	IN
cord-022053-idft1p6d	143	39	the	the	DT
cord-022053-idft1p6d	143	40	Aspergillus	aspergillus	NN
cord-022053-idft1p6d	143	41	.	.	.
cord-022053-idft1p6d	144	1	28	28	CD
cord-022053-idft1p6d	145	1	This	this	DT
cord-022053-idft1p6d	145	2	compared	compare	VBN
cord-022053-idft1p6d	145	3	with	with	IN
cord-022053-idft1p6d	145	4	94.1	94.1	CD
cord-022053-idft1p6d	145	5	%	%	NN
cord-022053-idft1p6d	145	6	and	and	CC
cord-022053-idft1p6d	145	7	88.6	88.6	CD
cord-022053-idft1p6d	145	8	%	%	NN
cord-022053-idft1p6d	145	9	,	,	,
cord-022053-idft1p6d	145	10	respectively	respectively	RB
cord-022053-idft1p6d	145	11	,	,	,
cord-022053-idft1p6d	145	12	by	by	IN
cord-022053-idft1p6d	145	13	routine	routine	JJ
cord-022053-idft1p6d	145	14	laboratory	laboratory	NN
cord-022053-idft1p6d	145	15	methods	method	NNS
cord-022053-idft1p6d	145	16	.	.	.
cord-022053-idft1p6d	146	1	When	when	WRB
cord-022053-idft1p6d	146	2	the	the	DT
cord-022053-idft1p6d	146	3	authors	author	NNS
cord-022053-idft1p6d	146	4	limited	limit	VBD
cord-022053-idft1p6d	146	5	the	the	DT
cord-022053-idft1p6d	146	6	study	study	NN
cord-022053-idft1p6d	146	7	to	to	IN
cord-022053-idft1p6d	146	8	only	only	RB
cord-022053-idft1p6d	146	9	those	those	DT
cord-022053-idft1p6d	146	10	species	specie	NNS
cord-022053-idft1p6d	146	11	that	that	WDT
cord-022053-idft1p6d	146	12	were	be	VBD
cord-022053-idft1p6d	146	13	present	present	JJ
cord-022053-idft1p6d	146	14	in	in	IN
cord-022053-idft1p6d	146	15	the	the	DT
cord-022053-idft1p6d	146	16	database	database	NN
cord-022053-idft1p6d	146	17	,	,	,
cord-022053-idft1p6d	146	18	100	100	CD
cord-022053-idft1p6d	146	19	%	%	NN
cord-022053-idft1p6d	146	20	of	of	IN
cord-022053-idft1p6d	146	21	the	the	DT
cord-022053-idft1p6d	146	22	Aspergillus	aspergillus	NN
cord-022053-idft1p6d	146	23	isolates	isolate	NNS
cord-022053-idft1p6d	146	24	were	be	VBD
cord-022053-idft1p6d	146	25	correctly	correctly	RB
cord-022053-idft1p6d	146	26	identified	identify	VBN
cord-022053-idft1p6d	146	27	.	.	.
cord-022053-idft1p6d	147	1	28	28	CD
cord-022053-idft1p6d	148	1	In	in	IN
cord-022053-idft1p6d	148	2	another	another	DT
cord-022053-idft1p6d	148	3	study	study	NN
cord-022053-idft1p6d	148	4	the	the	DT
cord-022053-idft1p6d	148	5	Vitek	Vitek	NNP
cord-022053-idft1p6d	148	6	MS	MS	NNP
cord-022053-idft1p6d	148	7	was	be	VBD
cord-022053-idft1p6d	148	8	able	able	JJ
cord-022053-idft1p6d	148	9	to	to	TO
cord-022053-idft1p6d	148	10	correctly	correctly	RB
cord-022053-idft1p6d	148	11	discriminate	discriminate	VB
cord-022053-idft1p6d	148	12	closely	closely	RB
cord-022053-idft1p6d	148	13	related	related	JJ
cord-022053-idft1p6d	148	14	Aspergillus	aspergillus	NN
cord-022053-idft1p6d	148	15	species	specie	NNS
cord-022053-idft1p6d	148	16	,	,	,
cord-022053-idft1p6d	148	17	Aspergillus	aspergillus	NN
cord-022053-idft1p6d	148	18	fumigatus	fumigatus	NN
cord-022053-idft1p6d	148	19	and	and	CC
cord-022053-idft1p6d	148	20	Aspergillus	aspergillus	NN
cord-022053-idft1p6d	148	21	lentulus	lentulus	NN
cord-022053-idft1p6d	148	22	.	.	.
cord-022053-idft1p6d	149	1	29	29	CD
cord-022053-idft1p6d	150	1	Schulthess	Schulthess	NNP
cord-022053-idft1p6d	150	2	et	et	NNP
cord-022053-idft1p6d	150	3	al	al	NNP
cord-022053-idft1p6d	150	4	.	.	.
cord-022053-idft1p6d	151	1	did	do	VBD
cord-022053-idft1p6d	151	2	a	a	DT
cord-022053-idft1p6d	151	3	prospective	prospective	JJ
cord-022053-idft1p6d	151	4	study	study	NN
cord-022053-idft1p6d	151	5	on	on	IN
cord-022053-idft1p6d	151	6	200	200	CD
cord-022053-idft1p6d	151	7	isolates	isolate	NNS
cord-022053-idft1p6d	151	8	using	use	VBG
cord-022053-idft1p6d	151	9	the	the	DT
cord-022053-idft1p6d	151	10	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	151	11	/	/	SYM
cord-022053-idft1p6d	151	12	Filamentous	Filamentous	NNP
cord-022053-idft1p6d	151	13	Fungi	Fungi	NNP
cord-022053-idft1p6d	151	14	Library	Library	NNP
cord-022053-idft1p6d	151	15	1.0	1.0	CD
cord-022053-idft1p6d	151	16	.	.	.
cord-022053-idft1p6d	152	1	They	-PRON-	PRP
cord-022053-idft1p6d	152	2	achieved	achieve	VBD
cord-022053-idft1p6d	152	3	a	a	DT
cord-022053-idft1p6d	152	4	79	79	CD
cord-022053-idft1p6d	152	5	%	%	NN
cord-022053-idft1p6d	152	6	species	specie	NNS
cord-022053-idft1p6d	152	7	and	and	CC
cord-022053-idft1p6d	152	8	83.5	83.5	CD
cord-022053-idft1p6d	152	9	%	%	NN
cord-022053-idft1p6d	152	10	genus	genus	NN
cord-022053-idft1p6d	152	11	level	level	NN
cord-022053-idft1p6d	152	12	identification	identification	NN
cord-022053-idft1p6d	152	13	.	.	.
cord-022053-idft1p6d	153	1	Particularly	particularly	RB
cord-022053-idft1p6d	153	2	poor	poor	JJ
cord-022053-idft1p6d	153	3	performance	performance	NN
cord-022053-idft1p6d	153	4	was	be	VBD
cord-022053-idft1p6d	153	5	noted	note	VBN
cord-022053-idft1p6d	153	6	for	for	IN
cord-022053-idft1p6d	153	7	Mucor	Mucor	NNP
cord-022053-idft1p6d	153	8	and	and	CC
cord-022053-idft1p6d	153	9	Scopulariposis	Scopulariposis	NNP
cord-022053-idft1p6d	153	10	.	.	.
cord-022053-idft1p6d	154	1	30	30	CD
cord-022053-idft1p6d	154	2	Chen	Chen	NNP
cord-022053-idft1p6d	154	3	et	et	NNP
cord-022053-idft1p6d	154	4	al	al	NNP
cord-022053-idft1p6d	154	5	.	.	.
cord-022053-idft1p6d	155	1	evaluated	evaluate	VBN
cord-022053-idft1p6d	155	2	50	50	CD
cord-022053-idft1p6d	155	3	clinical	clinical	JJ
cord-022053-idft1p6d	155	4	mold	mold	NN
cord-022053-idft1p6d	155	5	isolates	isolate	VBZ
cord-022053-idft1p6d	155	6	with	with	IN
cord-022053-idft1p6d	155	7	the	the	DT
cord-022053-idft1p6d	155	8	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	155	9	and	and	CC
cord-022053-idft1p6d	155	10	found	find	VBD
cord-022053-idft1p6d	155	11	that	that	IN
cord-022053-idft1p6d	155	12	several	several	JJ
cord-022053-idft1p6d	155	13	were	be	VBD
cord-022053-idft1p6d	155	14	not	not	RB
cord-022053-idft1p6d	155	15	identified	identify	VBN
cord-022053-idft1p6d	155	16	or	or	CC
cord-022053-idft1p6d	155	17	identified	identify	VBN
cord-022053-idft1p6d	155	18	with	with	IN
cord-022053-idft1p6d	155	19	a	a	DT
cord-022053-idft1p6d	155	20	low	low	JJ
cord-022053-idft1p6d	155	21	score	score	NN
cord-022053-idft1p6d	155	22	(	(	-LRB-
cord-022053-idft1p6d	155	23	<	<	NNP
cord-022053-idft1p6d	155	24	1.7	1.7	CD
cord-022053-idft1p6d	155	25	)	)	-RRB-
cord-022053-idft1p6d	155	26	.	.	.
cord-022053-idft1p6d	156	1	31	31	CD
cord-022053-idft1p6d	156	2	Twenty	twenty	CD
cord-022053-idft1p6d	156	3	-	-	HYPH
cord-022053-idft1p6d	156	4	eight	eight	CD
cord-022053-idft1p6d	156	5	isolates	isolate	NNS
cord-022053-idft1p6d	156	6	of	of	IN
cord-022053-idft1p6d	156	7	Penicillium	Penicillium	NNP
cord-022053-idft1p6d	156	8	marneffei	marneffei	NNP
cord-022053-idft1p6d	156	9	were	be	VBD
cord-022053-idft1p6d	156	10	not	not	RB
cord-022053-idft1p6d	156	11	identified	identify	VBN
cord-022053-idft1p6d	156	12	due	due	IN
cord-022053-idft1p6d	156	13	to	to	IN
cord-022053-idft1p6d	156	14	the	the	DT
cord-022053-idft1p6d	156	15	lack	lack	NN
cord-022053-idft1p6d	156	16	of	of	IN
cord-022053-idft1p6d	156	17	reference	reference	NN
cord-022053-idft1p6d	156	18	spectra	spectrum	NNS
cord-022053-idft1p6d	156	19	in	in	IN
cord-022053-idft1p6d	156	20	the	the	DT
cord-022053-idft1p6d	156	21	database	database	NN
cord-022053-idft1p6d	156	22	;	;	:
cord-022053-idft1p6d	156	23	however	however	RB
cord-022053-idft1p6d	156	24	,	,	,
cord-022053-idft1p6d	156	25	the	the	DT
cord-022053-idft1p6d	156	26	rate	rate	NN
cord-022053-idft1p6d	156	27	of	of	IN
cord-022053-idft1p6d	156	28	identification	identification	NN
cord-022053-idft1p6d	156	29	went	go	VBD
cord-022053-idft1p6d	156	30	up	up	IN
cord-022053-idft1p6d	156	31	to	to	IN
cord-022053-idft1p6d	156	32	85.7	85.7	CD
cord-022053-idft1p6d	156	33	%	%	NN
cord-022053-idft1p6d	156	34	after	after	IN
cord-022053-idft1p6d	156	35	a	a	DT
cord-022053-idft1p6d	156	36	single	single	JJ
cord-022053-idft1p6d	156	37	P.	P.	NNP
cord-022053-idft1p6d	156	38	marneffei	marneffei	NNP
cord-022053-idft1p6d	156	39	spectrum	spectrum	NN
cord-022053-idft1p6d	156	40	was	be	VBD
cord-022053-idft1p6d	156	41	added	add	VBN
cord-022053-idft1p6d	156	42	to	to	IN
cord-022053-idft1p6d	156	43	the	the	DT
cord-022053-idft1p6d	156	44	database	database	NN
cord-022053-idft1p6d	156	45	.	.	.
cord-022053-idft1p6d	157	1	This	this	DT
cord-022053-idft1p6d	157	2	result	result	NN
cord-022053-idft1p6d	157	3	is	be	VBZ
cord-022053-idft1p6d	157	4	consistent	consistent	JJ
cord-022053-idft1p6d	157	5	with	with	IN
cord-022053-idft1p6d	157	6	a	a	DT
cord-022053-idft1p6d	157	7	number	number	NN
cord-022053-idft1p6d	157	8	of	of	IN
cord-022053-idft1p6d	157	9	studies	study	NNS
cord-022053-idft1p6d	157	10	indicating	indicate	VBG
cord-022053-idft1p6d	157	11	high	high	JJ
cord-022053-idft1p6d	157	12	performance	performance	NN
cord-022053-idft1p6d	157	13	of	of	IN
cord-022053-idft1p6d	157	14	MALDI	MALDI	NNS
cord-022053-idft1p6d	157	15	on	on	IN
cord-022053-idft1p6d	157	16	fungal	fungal	NN
cord-022053-idft1p6d	157	17	isolates	isolate	NNS
cord-022053-idft1p6d	157	18	using	use	VBG
cord-022053-idft1p6d	157	19	custom	custom	NN
cord-022053-idft1p6d	157	20	databases	database	NNS
cord-022053-idft1p6d	157	21	.	.	.
cord-022053-idft1p6d	158	1	[	[	-LRB-
cord-022053-idft1p6d	158	2	32	32	CD
cord-022053-idft1p6d	158	3	]	]	-RRB-
cord-022053-idft1p6d	158	4	[	[	-LRB-
cord-022053-idft1p6d	158	5	33	33	CD
cord-022053-idft1p6d	158	6	]	]	-RRB-
cord-022053-idft1p6d	159	1	[	[	-LRB-
cord-022053-idft1p6d	159	2	34	34	CD
cord-022053-idft1p6d	159	3	]	]	-RRB-
cord-022053-idft1p6d	159	4	[	[	-LRB-
cord-022053-idft1p6d	159	5	35	35	CD
cord-022053-idft1p6d	159	6	]	]	-RRB-
cord-022053-idft1p6d	159	7	[	[	-LRB-
cord-022053-idft1p6d	159	8	36	36	CD
cord-022053-idft1p6d	159	9	]	]	-RRB-
cord-022053-idft1p6d	160	1	[	[	-LRB-
cord-022053-idft1p6d	160	2	37	37	CD
cord-022053-idft1p6d	160	3	]	]	-RRB-
cord-022053-idft1p6d	161	1	Although	although	IN
cord-022053-idft1p6d	161	2	the	the	DT
cord-022053-idft1p6d	161	3	use	use	NN
cord-022053-idft1p6d	161	4	of	of	IN
cord-022053-idft1p6d	161	5	MALDI	MALDI	NNP
cord-022053-idft1p6d	161	6	-	-	HYPH
cord-022053-idft1p6d	161	7	TOF	TOF	NNP
cord-022053-idft1p6d	161	8	in	in	IN
cord-022053-idft1p6d	161	9	the	the	DT
cord-022053-idft1p6d	161	10	microbiology	microbiology	NN
cord-022053-idft1p6d	161	11	lab	lab	NN
cord-022053-idft1p6d	161	12	has	have	VBZ
cord-022053-idft1p6d	161	13	been	be	VBN
cord-022053-idft1p6d	161	14	confined	confine	VBN
cord-022053-idft1p6d	161	15	,	,	,
cord-022053-idft1p6d	161	16	for	for	IN
cord-022053-idft1p6d	161	17	the	the	DT
cord-022053-idft1p6d	161	18	most	most	JJS
cord-022053-idft1p6d	161	19	part	part	NN
cord-022053-idft1p6d	161	20	,	,	,
cord-022053-idft1p6d	161	21	to	to	IN
cord-022053-idft1p6d	161	22	cultured	cultured	JJ
cord-022053-idft1p6d	161	23	organisms	organism	NNS
cord-022053-idft1p6d	161	24	,	,	,
cord-022053-idft1p6d	161	25	there	there	EX
cord-022053-idft1p6d	161	26	have	have	VBP
cord-022053-idft1p6d	161	27	been	be	VBN
cord-022053-idft1p6d	161	28	several	several	JJ
cord-022053-idft1p6d	161	29	studies	study	NNS
cord-022053-idft1p6d	161	30	exploring	explore	VBG
cord-022053-idft1p6d	161	31	the	the	DT
cord-022053-idft1p6d	161	32	feasibility	feasibility	NN
cord-022053-idft1p6d	161	33	of	of	IN
cord-022053-idft1p6d	161	34	its	-PRON-	PRP$
cord-022053-idft1p6d	161	35	use	use	NN
cord-022053-idft1p6d	161	36	in	in	IN
cord-022053-idft1p6d	161	37	primary	primary	JJ
cord-022053-idft1p6d	161	38	samples	sample	NNS
cord-022053-idft1p6d	161	39	.	.	.
cord-022053-idft1p6d	162	1	For	for	IN
cord-022053-idft1p6d	162	2	example	example	NN
cord-022053-idft1p6d	162	3	,	,	,
cord-022053-idft1p6d	162	4	the	the	DT
cord-022053-idft1p6d	162	5	use	use	NN
cord-022053-idft1p6d	162	6	of	of	IN
cord-022053-idft1p6d	162	7	MALDI	MALDI	NNS
cord-022053-idft1p6d	162	8	directly	directly	RB
cord-022053-idft1p6d	162	9	on	on	IN
cord-022053-idft1p6d	162	10	positive	positive	JJ
cord-022053-idft1p6d	162	11	blood	blood	NN
cord-022053-idft1p6d	162	12	cultures	culture	NNS
cord-022053-idft1p6d	162	13	is	be	VBZ
cord-022053-idft1p6d	162	14	attractive	attractive	JJ
cord-022053-idft1p6d	162	15	for	for	IN
cord-022053-idft1p6d	162	16	both	both	CC
cord-022053-idft1p6d	162	17	its	-PRON-	PRP$
cord-022053-idft1p6d	162	18	rapidity	rapidity	NN
cord-022053-idft1p6d	162	19	and	and	CC
cord-022053-idft1p6d	162	20	the	the	DT
cord-022053-idft1p6d	162	21	breadth	breadth	NN
cord-022053-idft1p6d	162	22	of	of	IN
cord-022053-idft1p6d	162	23	detection	detection	NN
cord-022053-idft1p6d	162	24	possible	possible	JJ
cord-022053-idft1p6d	162	25	with	with	IN
cord-022053-idft1p6d	162	26	an	an	DT
cord-022053-idft1p6d	162	27	open	open	JJ
cord-022053-idft1p6d	162	28	system	system	NN
cord-022053-idft1p6d	162	29	.	.	.
cord-022053-idft1p6d	163	1	Sample	sample	NN
cord-022053-idft1p6d	163	2	processing	processing	NN
cord-022053-idft1p6d	163	3	directly	directly	RB
cord-022053-idft1p6d	163	4	from	from	IN
cord-022053-idft1p6d	163	5	blood	blood	NN
cord-022053-idft1p6d	163	6	is	be	VBZ
cord-022053-idft1p6d	163	7	not	not	RB
cord-022053-idft1p6d	163	8	trivial	trivial	JJ
cord-022053-idft1p6d	163	9	and	and	CC
cord-022053-idft1p6d	163	10	not	not	RB
cord-022053-idft1p6d	163	11	yet	yet	RB
cord-022053-idft1p6d	163	12	FDA	FDA	NNP
cord-022053-idft1p6d	163	13	approved	approve	VBD
cord-022053-idft1p6d	163	14	,	,	,
cord-022053-idft1p6d	163	15	but	but	CC
cord-022053-idft1p6d	163	16	each	each	DT
cord-022053-idft1p6d	163	17	major	major	JJ
cord-022053-idft1p6d	163	18	platform	platform	NN
cord-022053-idft1p6d	163	19	has	have	VBZ
cord-022053-idft1p6d	163	20	a	a	DT
cord-022053-idft1p6d	163	21	dedicated	dedicated	JJ
cord-022053-idft1p6d	163	22	process	process	NN
cord-022053-idft1p6d	163	23	and	and	CC
cord-022053-idft1p6d	163	24	the	the	DT
cord-022053-idft1p6d	163	25	results	result	NNS
cord-022053-idft1p6d	163	26	are	be	VBP
cord-022053-idft1p6d	163	27	promising	promise	VBG
cord-022053-idft1p6d	163	28	with	with	IN
cord-022053-idft1p6d	163	29	high	high	JJ
cord-022053-idft1p6d	163	30	clinical	clinical	JJ
cord-022053-idft1p6d	163	31	accuracy	accuracy	NN
cord-022053-idft1p6d	163	32	(	(	-LRB-
cord-022053-idft1p6d	163	33	80	80	CD
cord-022053-idft1p6d	163	34	%	%	NN
cord-022053-idft1p6d	163	35	to	to	TO
cord-022053-idft1p6d	163	36	90	90	CD
cord-022053-idft1p6d	163	37	%	%	NN
cord-022053-idft1p6d	163	38	)	)	-RRB-
cord-022053-idft1p6d	163	39	.	.	.
cord-022053-idft1p6d	164	1	3	3	CD
cord-022053-idft1p6d	164	2	,	,	,
cord-022053-idft1p6d	164	3	38	38	CD
cord-022053-idft1p6d	164	4	,	,	,
cord-022053-idft1p6d	164	5	39	39	CD
cord-022053-idft1p6d	164	6	Other	other	JJ
cord-022053-idft1p6d	164	7	promising	promising	JJ
cord-022053-idft1p6d	164	8	applications	application	NNS
cord-022053-idft1p6d	164	9	include	include	VBP
cord-022053-idft1p6d	164	10	direct	direct	JJ
cord-022053-idft1p6d	164	11	analysis	analysis	NN
cord-022053-idft1p6d	164	12	of	of	IN
cord-022053-idft1p6d	164	13	urine	urine	NN
cord-022053-idft1p6d	164	14	and	and	CC
cord-022053-idft1p6d	164	15	cerebrospinal	cerebrospinal	NN
cord-022053-idft1p6d	164	16	fluid	fluid	NN
cord-022053-idft1p6d	164	17	(	(	-LRB-
cord-022053-idft1p6d	164	18	CSF	CSF	NNP
cord-022053-idft1p6d	164	19	)	)	-RRB-
cord-022053-idft1p6d	164	20	,	,	,
cord-022053-idft1p6d	164	21	although	although	IN
cord-022053-idft1p6d	164	22	,	,	,
cord-022053-idft1p6d	164	23	as	as	IN
cord-022053-idft1p6d	164	24	with	with	IN
cord-022053-idft1p6d	164	25	blood	blood	NN
cord-022053-idft1p6d	164	26	,	,	,
cord-022053-idft1p6d	164	27	additional	additional	JJ
cord-022053-idft1p6d	164	28	screening	screening	NN
cord-022053-idft1p6d	164	29	and	and	CC
cord-022053-idft1p6d	164	30	processing	processing	NN
cord-022053-idft1p6d	164	31	steps	step	NNS
cord-022053-idft1p6d	164	32	are	be	VBP
cord-022053-idft1p6d	164	33	required	require	VBN
cord-022053-idft1p6d	164	34	.	.	.
cord-022053-idft1p6d	165	1	3	3	LS
cord-022053-idft1p6d	165	2	,	,	,
cord-022053-idft1p6d	165	3	[	[	-LRB-
cord-022053-idft1p6d	165	4	40	40	CD
cord-022053-idft1p6d	165	5	]	]	-RRB-
cord-022053-idft1p6d	165	6	[	[	-LRB-
cord-022053-idft1p6d	165	7	41	41	CD
cord-022053-idft1p6d	165	8	]	]	-RRB-
cord-022053-idft1p6d	166	1	[	[	-LRB-
cord-022053-idft1p6d	166	2	42	42	CD
cord-022053-idft1p6d	166	3	]	]	-RRB-
cord-022053-idft1p6d	166	4	[	[	-LRB-
cord-022053-idft1p6d	166	5	43	43	CD
cord-022053-idft1p6d	166	6	]	]	-RRB-
cord-022053-idft1p6d	167	1	In	in	IN
cord-022053-idft1p6d	167	2	summary	summary	NN
cord-022053-idft1p6d	167	3	,	,	,
cord-022053-idft1p6d	167	4	MALDI	MALDI	NNP
cord-022053-idft1p6d	167	5	-	-	HYPH
cord-022053-idft1p6d	167	6	TOF	TOF	NNP
cord-022053-idft1p6d	167	7	in	in	IN
cord-022053-idft1p6d	167	8	the	the	DT
cord-022053-idft1p6d	167	9	clinical	clinical	JJ
cord-022053-idft1p6d	167	10	microbiology	microbiology	NN
cord-022053-idft1p6d	167	11	lab	lab	NN
cord-022053-idft1p6d	167	12	has	have	VBZ
cord-022053-idft1p6d	167	13	been	be	VBN
cord-022053-idft1p6d	167	14	developed	develop	VBN
cord-022053-idft1p6d	167	15	to	to	TO
cord-022053-idft1p6d	167	16	complement	complement	VB
cord-022053-idft1p6d	167	17	and	and	CC
cord-022053-idft1p6d	167	18	in	in	IN
cord-022053-idft1p6d	167	19	many	many	JJ
cord-022053-idft1p6d	167	20	cases	case	NNS
cord-022053-idft1p6d	167	21	replace	replace	VBP
cord-022053-idft1p6d	167	22	the	the	DT
cord-022053-idft1p6d	167	23	traditional	traditional	JJ
cord-022053-idft1p6d	167	24	biochemical	biochemical	JJ
cord-022053-idft1p6d	167	25	diagnosis	diagnosis	NN
cord-022053-idft1p6d	167	26	of	of	IN
cord-022053-idft1p6d	167	27	bacteria	bacteria	NNS
cord-022053-idft1p6d	167	28	and	and	CC
cord-022053-idft1p6d	167	29	yeasts	yeast	NNS
cord-022053-idft1p6d	167	30	and	and	CC
cord-022053-idft1p6d	167	31	can	can	MD
cord-022053-idft1p6d	167	32	shorten	shorten	VB
cord-022053-idft1p6d	167	33	turnaround	turnaround	NN
cord-022053-idft1p6d	167	34	time	time	NN
cord-022053-idft1p6d	168	1	(	(	-LRB-
cord-022053-idft1p6d	168	2	TAT	tat	NN
cord-022053-idft1p6d	168	3	)	)	-RRB-
cord-022053-idft1p6d	168	4	by	by	IN
cord-022053-idft1p6d	168	5	hours	hour	NNS
cord-022053-idft1p6d	168	6	to	to	IN
cord-022053-idft1p6d	168	7	days	day	NNS
cord-022053-idft1p6d	169	1	(	(	-LRB-
cord-022053-idft1p6d	169	2	depending	depend	VBG
cord-022053-idft1p6d	169	3	There	there	EX
cord-022053-idft1p6d	169	4	are	be	VBP
cord-022053-idft1p6d	169	5	a	a	DT
cord-022053-idft1p6d	169	6	variety	variety	NN
cord-022053-idft1p6d	169	7	of	of	IN
cord-022053-idft1p6d	169	8	focused	focused	JJ
cord-022053-idft1p6d	169	9	assays	assay	NNS
cord-022053-idft1p6d	169	10	in	in	IN
cord-022053-idft1p6d	169	11	the	the	DT
cord-022053-idft1p6d	169	12	clinical	clinical	JJ
cord-022053-idft1p6d	169	13	microbiology	microbiology	NN
cord-022053-idft1p6d	169	14	lab	lab	NN
cord-022053-idft1p6d	169	15	and	and	CC
cord-022053-idft1p6d	169	16	anatomic	anatomic	JJ
cord-022053-idft1p6d	169	17	pathology	pathology	NN
cord-022053-idft1p6d	169	18	samples	sample	NNS
cord-022053-idft1p6d	169	19	that	that	WDT
cord-022053-idft1p6d	169	20	query	query	VBP
cord-022053-idft1p6d	169	21	one	one	CD
cord-022053-idft1p6d	169	22	or	or	CC
cord-022053-idft1p6d	169	23	a	a	DT
cord-022053-idft1p6d	169	24	handful	handful	NN
cord-022053-idft1p6d	169	25	of	of	IN
cord-022053-idft1p6d	169	26	genes	gene	NNS
cord-022053-idft1p6d	169	27	by	by	IN
cord-022053-idft1p6d	169	28	amplification	amplification	NN
cord-022053-idft1p6d	169	29	of	of	IN
cord-022053-idft1p6d	169	30	the	the	DT
cord-022053-idft1p6d	169	31	target	target	NN
cord-022053-idft1p6d	169	32	.	.	.
cord-022053-idft1p6d	170	1	The	the	DT
cord-022053-idft1p6d	170	2	majority	majority	NN
cord-022053-idft1p6d	170	3	of	of	IN
cord-022053-idft1p6d	170	4	these	these	DT
cord-022053-idft1p6d	170	5	relies	relie	NNS
cord-022053-idft1p6d	170	6	on	on	IN
cord-022053-idft1p6d	170	7	the	the	DT
cord-022053-idft1p6d	170	8	PCR	PCR	NNP
cord-022053-idft1p6d	170	9	and	and	CC
cord-022053-idft1p6d	170	10	includes	include	VBZ
cord-022053-idft1p6d	170	11	both	both	DT
cord-022053-idft1p6d	170	12	qualitative	qualitative	JJ
cord-022053-idft1p6d	170	13	and	and	CC
cord-022053-idft1p6d	170	14	quantitative	quantitative	JJ
cord-022053-idft1p6d	170	15	assays	assay	NNS
cord-022053-idft1p6d	170	16	,	,	,
cord-022053-idft1p6d	170	17	such	such	JJ
cord-022053-idft1p6d	170	18	as	as	IN
cord-022053-idft1p6d	170	19	those	those	DT
cord-022053-idft1p6d	170	20	run	run	VBN
cord-022053-idft1p6d	170	21	on	on	IN
cord-022053-idft1p6d	170	22	real	real	JJ
cord-022053-idft1p6d	170	23	-	-	HYPH
cord-022053-idft1p6d	170	24	time	time	NN
cord-022053-idft1p6d	170	25	PCR	PCR	NNP
cord-022053-idft1p6d	170	26	platforms	platform	NNS
cord-022053-idft1p6d	170	27	(	(	-LRB-
cord-022053-idft1p6d	170	28	i.e.	i.e.	FW
cord-022053-idft1p6d	170	29	,	,	,
cord-022053-idft1p6d	170	30	the	the	DT
cord-022053-idft1p6d	170	31	Lightcycler	Lightcycler	NNP
cord-022053-idft1p6d	170	32	[	[	-LRB-
cord-022053-idft1p6d	170	33	Roche	Roche	NNP
cord-022053-idft1p6d	170	34	Diagnostics	Diagnostics	NNP
cord-022053-idft1p6d	170	35	,	,	,
cord-022053-idft1p6d	170	36	Indianapolis	Indianapolis	NNP
cord-022053-idft1p6d	170	37	,	,	,
cord-022053-idft1p6d	170	38	Indiana	Indiana	NNP
cord-022053-idft1p6d	170	39	]	]	-RRB-
cord-022053-idft1p6d	170	40	and	and	CC
cord-022053-idft1p6d	170	41	the	the	DT
cord-022053-idft1p6d	170	42	Smartcycler	Smartcycler	NNP
cord-022053-idft1p6d	170	43	[	[	-LRB-
cord-022053-idft1p6d	170	44	Cepheid	Cepheid	NNP
cord-022053-idft1p6d	170	45	,	,	,
cord-022053-idft1p6d	170	46	Sunnyvale	Sunnyvale	NNP
cord-022053-idft1p6d	170	47	,	,	,
cord-022053-idft1p6d	170	48	California	California	NNP
cord-022053-idft1p6d	170	49	]	]	-RRB-
cord-022053-idft1p6d	170	50	)	)	-RRB-
cord-022053-idft1p6d	170	51	.	.	.
cord-022053-idft1p6d	171	1	Target	target	NN
cord-022053-idft1p6d	171	2	detection	detection	NN
cord-022053-idft1p6d	171	3	is	be	VBZ
cord-022053-idft1p6d	171	4	typically	typically	RB
cord-022053-idft1p6d	171	5	by	by	IN
cord-022053-idft1p6d	171	6	fluorescent	fluorescent	JJ
cord-022053-idft1p6d	171	7	probes	probe	NNS
cord-022053-idft1p6d	171	8	,	,	,
cord-022053-idft1p6d	171	9	such	such	JJ
cord-022053-idft1p6d	171	10	as	as	IN
cord-022053-idft1p6d	171	11	TaqMan	TaqMan	NNP
cord-022053-idft1p6d	171	12	.	.	.
cord-022053-idft1p6d	172	1	60	60	CD
cord-022053-idft1p6d	172	2	Single	single	JJ
cord-022053-idft1p6d	172	3	-	-	HYPH
cord-022053-idft1p6d	172	4	target	target	NN
cord-022053-idft1p6d	172	5	PCR	PCR	NNP
cord-022053-idft1p6d	172	6	has	have	VBZ
cord-022053-idft1p6d	172	7	been	be	VBN
cord-022053-idft1p6d	172	8	applied	apply	VBN
cord-022053-idft1p6d	172	9	to	to	IN
cord-022053-idft1p6d	172	10	fresh	fresh	JJ
cord-022053-idft1p6d	172	11	,	,	,
cord-022053-idft1p6d	172	12	frozen	frozen	JJ
cord-022053-idft1p6d	172	13	,	,	,
cord-022053-idft1p6d	172	14	and	and	CC
cord-022053-idft1p6d	172	15	FFPE	FFPE	NNP
cord-022053-idft1p6d	172	16	in	in	IN
cord-022053-idft1p6d	172	17	anatomic	anatomic	JJ
cord-022053-idft1p6d	172	18	pathology	pathology	NN
cord-022053-idft1p6d	172	19	for	for	IN
cord-022053-idft1p6d	172	20	a	a	DT
cord-022053-idft1p6d	172	21	large	large	JJ
cord-022053-idft1p6d	172	22	range	range	NN
cord-022053-idft1p6d	172	23	of	of	IN
cord-022053-idft1p6d	172	24	microorganisms	microorganism	NNS
cord-022053-idft1p6d	172	25	but	but	CC
cord-022053-idft1p6d	172	26	largely	largely	RB
cord-022053-idft1p6d	172	27	through	through	IN
cord-022053-idft1p6d	172	28	home	home	NN
cord-022053-idft1p6d	172	29	-	-	HYPH
cord-022053-idft1p6d	172	30	brew	brew	NN
cord-022053-idft1p6d	172	31	or	or	CC
cord-022053-idft1p6d	172	32	in	in	IN
cord-022053-idft1p6d	172	33	-	-	HYPH
cord-022053-idft1p6d	172	34	house	house	NN
cord-022053-idft1p6d	172	35	assays	assay	NNS
cord-022053-idft1p6d	172	36	and/or	and/or	CC
cord-022053-idft1p6d	172	37	performance	performance	NN
cord-022053-idft1p6d	172	38	by	by	IN
cord-022053-idft1p6d	172	39	large	large	JJ
cord-022053-idft1p6d	172	40	specialty	specialty	NN
cord-022053-idft1p6d	172	41	reference	reference	NN
cord-022053-idft1p6d	172	42	labs	lab	NNS
cord-022053-idft1p6d	172	43	,	,	,
cord-022053-idft1p6d	172	44	due	due	IN
cord-022053-idft1p6d	172	45	to	to	IN
cord-022053-idft1p6d	172	46	the	the	DT
cord-022053-idft1p6d	172	47	challenges	challenge	NNS
cord-022053-idft1p6d	172	48	of	of	IN
cord-022053-idft1p6d	172	49	control	control	NN
cord-022053-idft1p6d	172	50	tissue	tissue	NN
cord-022053-idft1p6d	172	51	,	,	,
cord-022053-idft1p6d	172	52	validation	validation	NN
cord-022053-idft1p6d	172	53	,	,	,
cord-022053-idft1p6d	172	54	and	and	CC
cord-022053-idft1p6d	172	55	complexity	complexity	NN
cord-022053-idft1p6d	172	56	of	of	IN
cord-022053-idft1p6d	172	57	interpretation	interpretation	NN
cord-022053-idft1p6d	172	58	.	.	.
cord-022053-idft1p6d	173	1	Recent	recent	JJ
cord-022053-idft1p6d	173	2	developments	development	NNS
cord-022053-idft1p6d	173	3	in	in	IN
cord-022053-idft1p6d	173	4	this	this	DT
cord-022053-idft1p6d	173	5	area	area	NN
cord-022053-idft1p6d	173	6	are	be	VBP
cord-022053-idft1p6d	173	7	based	base	VBN
cord-022053-idft1p6d	173	8	on	on	IN
cord-022053-idft1p6d	173	9	the	the	DT
cord-022053-idft1p6d	173	10	same	same	JJ
cord-022053-idft1p6d	173	11	technology	technology	NN
cord-022053-idft1p6d	173	12	but	but	CC
cord-022053-idft1p6d	173	13	are	be	VBP
cord-022053-idft1p6d	173	14	innovative	innovative	JJ
cord-022053-idft1p6d	173	15	in	in	IN
cord-022053-idft1p6d	173	16	their	-PRON-	PRP$
cord-022053-idft1p6d	173	17	convenience	convenience	NN
cord-022053-idft1p6d	173	18	,	,	,
cord-022053-idft1p6d	173	19	detection	detection	NN
cord-022053-idft1p6d	173	20	method	method	NN
cord-022053-idft1p6d	173	21	,	,	,
cord-022053-idft1p6d	173	22	and	and	CC
cord-022053-idft1p6d	173	23	,	,	,
cord-022053-idft1p6d	173	24	in	in	IN
cord-022053-idft1p6d	173	25	some	some	DT
cord-022053-idft1p6d	173	26	instances	instance	NNS
cord-022053-idft1p6d	173	27	,	,	,
cord-022053-idft1p6d	173	28	sensitivity	sensitivity	NN
cord-022053-idft1p6d	173	29	.	.	.
cord-022053-idft1p6d	174	1	For	for	IN
cord-022053-idft1p6d	174	2	example	example	NN
cord-022053-idft1p6d	174	3	,	,	,
cord-022053-idft1p6d	174	4	using	use	VBG
cord-022053-idft1p6d	174	5	standard	standard	JJ
cord-022053-idft1p6d	174	6	real	real	JJ
cord-022053-idft1p6d	174	7	-	-	HYPH
cord-022053-idft1p6d	174	8	time	time	NN
cord-022053-idft1p6d	174	9	PCR	pcr	NN
cord-022053-idft1p6d	174	10	technology	technology	NN
cord-022053-idft1p6d	174	11	,	,	,
cord-022053-idft1p6d	174	12	FDA	FDA	NNP
cord-022053-idft1p6d	174	13	-	-	HYPH
cord-022053-idft1p6d	174	14	approved	approve	VBN
cord-022053-idft1p6d	174	15	assays	assay	NNS
cord-022053-idft1p6d	174	16	,	,	,
cord-022053-idft1p6d	174	17	such	such	JJ
cord-022053-idft1p6d	174	18	as	as	IN
cord-022053-idft1p6d	174	19	the	the	DT
cord-022053-idft1p6d	174	20	Prodesse	Prodesse	NNP
cord-022053-idft1p6d	174	21	kits	kit	NNS
cord-022053-idft1p6d	174	22	(	(	-LRB-
cord-022053-idft1p6d	174	23	Hologic	Hologic	NNP
cord-022053-idft1p6d	174	24	Gen	Gen	NNP
cord-022053-idft1p6d	174	25	-	-	HYPH
cord-022053-idft1p6d	174	26	Probe	Probe	NNP
cord-022053-idft1p6d	174	27	)	)	-RRB-
cord-022053-idft1p6d	174	28	,	,	,
cord-022053-idft1p6d	174	29	provide	provide	VB
cord-022053-idft1p6d	174	30	convenient	convenient	JJ
cord-022053-idft1p6d	174	31	detection	detection	NN
cord-022053-idft1p6d	174	32	of	of	IN
cord-022053-idft1p6d	174	33	small	small	JJ
cord-022053-idft1p6d	174	34	sets	set	NNS
cord-022053-idft1p6d	174	35	of	of	IN
cord-022053-idft1p6d	174	36	respiratory	respiratory	JJ
cord-022053-idft1p6d	174	37	viruses	virus	NNS
cord-022053-idft1p6d	174	38	.	.	.
cord-022053-idft1p6d	175	1	The	the	DT
cord-022053-idft1p6d	175	2	Xpert	Xpert	NNP
cord-022053-idft1p6d	175	3	system	system	NN
cord-022053-idft1p6d	175	4	(	(	-LRB-
cord-022053-idft1p6d	175	5	Cepheid	Cepheid	NNP
cord-022053-idft1p6d	175	6	)	)	-RRB-
cord-022053-idft1p6d	175	7	has	have	VBZ
cord-022053-idft1p6d	175	8	had	have	VBN
cord-022053-idft1p6d	175	9	a	a	DT
cord-022053-idft1p6d	175	10	large	large	JJ
cord-022053-idft1p6d	175	11	impact	impact	NN
cord-022053-idft1p6d	175	12	on	on	IN
cord-022053-idft1p6d	175	13	the	the	DT
cord-022053-idft1p6d	175	14	clinical	clinical	JJ
cord-022053-idft1p6d	175	15	lab	lab	NN
cord-022053-idft1p6d	175	16	due	due	IN
cord-022053-idft1p6d	175	17	to	to	IN
cord-022053-idft1p6d	175	18	its	-PRON-	PRP$
cord-022053-idft1p6d	175	19	ease	ease	NN
cord-022053-idft1p6d	175	20	of	of	IN
cord-022053-idft1p6d	175	21	use	use	NN
cord-022053-idft1p6d	175	22	(	(	-LRB-
cord-022053-idft1p6d	175	23	sample	sample	NN
cord-022053-idft1p6d	175	24	-	-	HYPH
cord-022053-idft1p6d	175	25	to	to	IN
cord-022053-idft1p6d	175	26	-	-	HYPH
cord-022053-idft1p6d	175	27	result	result	NN
cord-022053-idft1p6d	175	28	platform	platform	NN
cord-022053-idft1p6d	175	29	)	)	-RRB-
cord-022053-idft1p6d	175	30	,	,	,
cord-022053-idft1p6d	175	31	excellent	excellent	JJ
cord-022053-idft1p6d	175	32	performance	performance	NN
cord-022053-idft1p6d	175	33	,	,	,
cord-022053-idft1p6d	175	34	and	and	CC
cord-022053-idft1p6d	175	35	rapid	rapid	JJ
cord-022053-idft1p6d	175	36	TAT	TAT	NNP
cord-022053-idft1p6d	175	37	(	(	-LRB-
cord-022053-idft1p6d	175	38	approximately	approximately	RB
cord-022053-idft1p6d	175	39	1	1	CD
cord-022053-idft1p6d	175	40	hour	hour	NN
cord-022053-idft1p6d	175	41	)	)	-RRB-
cord-022053-idft1p6d	175	42	.	.	.
cord-022053-idft1p6d	176	1	Detection	detection	NN
cord-022053-idft1p6d	176	2	is	be	VBZ
cord-022053-idft1p6d	176	3	by	by	IN
cord-022053-idft1p6d	176	4	melt	melt	NN
cord-022053-idft1p6d	176	5	curve	curve	NN
cord-022053-idft1p6d	176	6	analysis	analysis	NN
cord-022053-idft1p6d	176	7	rather	rather	RB
cord-022053-idft1p6d	176	8	than	than	IN
cord-022053-idft1p6d	176	9	fluorescence	fluorescence	NN
cord-022053-idft1p6d	176	10	.	.	.
cord-022053-idft1p6d	177	1	This	this	DT
cord-022053-idft1p6d	177	2	platform	platform	NN
cord-022053-idft1p6d	177	3	offers	offer	VBZ
cord-022053-idft1p6d	177	4	a	a	DT
cord-022053-idft1p6d	177	5	variety	variety	NN
cord-022053-idft1p6d	177	6	of	of	IN
cord-022053-idft1p6d	177	7	cartridges	cartridge	NNS
cord-022053-idft1p6d	177	8	(	(	-LRB-
cord-022053-idft1p6d	177	9	e.g.	e.g.	RB
cord-022053-idft1p6d	177	10	,	,	,
cord-022053-idft1p6d	177	11	C.	C.	NNP
cord-022053-idft1p6d	177	12	difficile	difficile	NN
cord-022053-idft1p6d	177	13	,	,	,
cord-022053-idft1p6d	177	14	MRSA	MRSA	NNP
cord-022053-idft1p6d	177	15	,	,	,
cord-022053-idft1p6d	177	16	MTB	MTB	NNP
cord-022053-idft1p6d	177	17	/	/	SYM
cord-022053-idft1p6d	177	18	RIF	RIF	NNP
cord-022053-idft1p6d	177	19	)	)	-RRB-
cord-022053-idft1p6d	177	20	focused	focus	VBD
cord-022053-idft1p6d	177	21	on	on	IN
cord-022053-idft1p6d	177	22	quick	quick	JJ
cord-022053-idft1p6d	177	23	answers	answer	NNS
cord-022053-idft1p6d	177	24	to	to	IN
cord-022053-idft1p6d	177	25	major	major	JJ
cord-022053-idft1p6d	177	26	clinical	clinical	JJ
cord-022053-idft1p6d	177	27	decision	decision	NN
cord-022053-idft1p6d	177	28	points	point	NNS
cord-022053-idft1p6d	177	29	.	.	.
cord-022053-idft1p6d	178	1	[	[	-LRB-
cord-022053-idft1p6d	178	2	61	61	CD
cord-022053-idft1p6d	178	3	]	]	-RRB-
cord-022053-idft1p6d	178	4	[	[	-LRB-
cord-022053-idft1p6d	178	5	62	62	CD
cord-022053-idft1p6d	178	6	]	]	-RRB-
cord-022053-idft1p6d	178	7	[	[	-LRB-
cord-022053-idft1p6d	178	8	63	63	CD
cord-022053-idft1p6d	178	9	]	]	-RRB-
cord-022053-idft1p6d	178	10	[	[	-LRB-
cord-022053-idft1p6d	178	11	64	64	CD
cord-022053-idft1p6d	178	12	]	]	-RRB-
cord-022053-idft1p6d	179	1	Newer	new	JJR
cord-022053-idft1p6d	179	2	assays	assay	NNS
cord-022053-idft1p6d	179	3	from	from	IN
cord-022053-idft1p6d	179	4	Cepheid	Cepheid	NNP
cord-022053-idft1p6d	179	5	are	be	VBP
cord-022053-idft1p6d	179	6	in	in	IN
cord-022053-idft1p6d	179	7	development	development	NN
cord-022053-idft1p6d	179	8	for	for	IN
cord-022053-idft1p6d	179	9	FFPE	FFPE	NNP
cord-022053-idft1p6d	179	10	,	,	,
cord-022053-idft1p6d	179	11	which	which	WDT
cord-022053-idft1p6d	179	12	will	will	MD
cord-022053-idft1p6d	179	13	include	include	VB
cord-022053-idft1p6d	179	14	microbiologic	microbiologic	JJ
cord-022053-idft1p6d	179	15	applications	application	NNS
cord-022053-idft1p6d	179	16	.	.	.
cord-022053-idft1p6d	180	1	For	for	IN
cord-022053-idft1p6d	180	2	novel	novel	JJ
cord-022053-idft1p6d	180	3	detection	detection	NN
cord-022053-idft1p6d	180	4	methods	method	NNS
cord-022053-idft1p6d	180	5	and	and	CC
cord-022053-idft1p6d	180	6	increased	increase	VBN
cord-022053-idft1p6d	180	7	sensitivity	sensitivity	NN
cord-022053-idft1p6d	180	8	,	,	,
cord-022053-idft1p6d	180	9	the	the	DT
cord-022053-idft1p6d	180	10	T2MR	T2MR	NNP
cord-022053-idft1p6d	180	11	platform	platform	NN
cord-022053-idft1p6d	180	12	(	(	-LRB-
cord-022053-idft1p6d	180	13	T2	T2	NNP
cord-022053-idft1p6d	180	14	Biosystems	Biosystems	NNP
cord-022053-idft1p6d	180	15	,	,	,
cord-022053-idft1p6d	180	16	Lexington	Lexington	NNP
cord-022053-idft1p6d	180	17	,	,	,
cord-022053-idft1p6d	180	18	Massachusetts	Massachusetts	NNP
cord-022053-idft1p6d	180	19	)	)	-RRB-
cord-022053-idft1p6d	180	20	is	be	VBZ
cord-022053-idft1p6d	180	21	one	one	CD
cord-022053-idft1p6d	180	22	of	of	IN
cord-022053-idft1p6d	180	23	the	the	DT
cord-022053-idft1p6d	180	24	most	most	RBS
cord-022053-idft1p6d	180	25	innovative	innovative	JJ
cord-022053-idft1p6d	180	26	technologies	technology	NNS
cord-022053-idft1p6d	180	27	.	.	.
cord-022053-idft1p6d	181	1	It	-PRON-	PRP
cord-022053-idft1p6d	181	2	is	be	VBZ
cord-022053-idft1p6d	181	3	a	a	DT
cord-022053-idft1p6d	181	4	complete	complete	JJ
cord-022053-idft1p6d	181	5	sampleto	sampleto	NN
cord-022053-idft1p6d	181	6	-	-	HYPH
cord-022053-idft1p6d	181	7	result	result	NN
cord-022053-idft1p6d	181	8	platform	platform	NN
cord-022053-idft1p6d	181	9	that	that	WDT
cord-022053-idft1p6d	181	10	relies	rely	VBZ
cord-022053-idft1p6d	181	11	on	on	IN
cord-022053-idft1p6d	181	12	detection	detection	NN
cord-022053-idft1p6d	181	13	of	of	IN
cord-022053-idft1p6d	181	14	pathogen	pathogen	NN
cord-022053-idft1p6d	181	15	-	-	HYPH
cord-022053-idft1p6d	181	16	specific	specific	JJ
cord-022053-idft1p6d	181	17	amplicons	amplicon	NNS
cord-022053-idft1p6d	181	18	by	by	IN
cord-022053-idft1p6d	181	19	hybridization	hybridization	NN
cord-022053-idft1p6d	181	20	with	with	IN
cord-022053-idft1p6d	181	21	tagged	tagged	JJ
cord-022053-idft1p6d	181	22	superparamagnetic	superparamagnetic	NNP
cord-022053-idft1p6d	181	23	particles	particle	NNS
cord-022053-idft1p6d	181	24	.	.	.
cord-022053-idft1p6d	182	1	65	65	CD
cord-022053-idft1p6d	183	1	The	the	DT
cord-022053-idft1p6d	183	2	T2Candida	T2Candida	NNP
cord-022053-idft1p6d	183	3	Panel	Panel	NNP
cord-022053-idft1p6d	183	4	(	(	-LRB-
cord-022053-idft1p6d	183	5	T2	T2	NNP
cord-022053-idft1p6d	183	6	Biosystems	Biosystems	NNP
cord-022053-idft1p6d	183	7	)	)	-RRB-
cord-022053-idft1p6d	183	8	is	be	VBZ
cord-022053-idft1p6d	183	9	the	the	DT
cord-022053-idft1p6d	183	10	only	only	JJ
cord-022053-idft1p6d	183	11	FDA	FDA	NNP
cord-022053-idft1p6d	183	12	-	-	HYPH
cord-022053-idft1p6d	183	13	approved	approve	VBN
cord-022053-idft1p6d	183	14	system	system	NN
cord-022053-idft1p6d	183	15	that	that	WDT
cord-022053-idft1p6d	183	16	directly	directly	RB
cord-022053-idft1p6d	183	17	analyzes	analyze	VBZ
cord-022053-idft1p6d	183	18	blood	blood	NN
cord-022053-idft1p6d	183	19	(	(	-LRB-
cord-022053-idft1p6d	183	20	without	without	IN
cord-022053-idft1p6d	183	21	culturing	culture	VBG
cord-022053-idft1p6d	183	22	)	)	-RRB-
cord-022053-idft1p6d	183	23	and	and	CC
cord-022053-idft1p6d	183	24	has	have	VBZ
cord-022053-idft1p6d	183	25	demonstrated	demonstrate	VBN
cord-022053-idft1p6d	183	26	impressive	impressive	JJ
cord-022053-idft1p6d	183	27	results	result	NNS
cord-022053-idft1p6d	183	28	in	in	IN
cord-022053-idft1p6d	183	29	clinical	clinical	JJ
cord-022053-idft1p6d	183	30	trials	trial	NNS
cord-022053-idft1p6d	183	31	(	(	-LRB-
cord-022053-idft1p6d	183	32	91	91	CD
cord-022053-idft1p6d	183	33	%	%	NN
cord-022053-idft1p6d	183	34	sensitivity	sensitivity	NN
cord-022053-idft1p6d	183	35	with	with	IN
cord-022053-idft1p6d	183	36	a	a	DT
cord-022053-idft1p6d	183	37	4.2-hour	4.2-hour	CD
cord-022053-idft1p6d	183	38	TAT	tat	NN
cord-022053-idft1p6d	183	39	)	)	-RRB-
cord-022053-idft1p6d	183	40	.	.	.
cord-022053-idft1p6d	184	1	66	66	CD
cord-022053-idft1p6d	185	1	T2	T2	NNP
cord-022053-idft1p6d	185	2	Biosystems	Biosystems	NNP
cord-022053-idft1p6d	185	3	is	be	VBZ
cord-022053-idft1p6d	185	4	currently	currently	RB
cord-022053-idft1p6d	185	5	developing	develop	VBG
cord-022053-idft1p6d	185	6	a	a	DT
cord-022053-idft1p6d	185	7	bacterial	bacterial	JJ
cord-022053-idft1p6d	185	8	panel	panel	NN
cord-022053-idft1p6d	185	9	as	as	RB
cord-022053-idft1p6d	185	10	well	well	RB
cord-022053-idft1p6d	185	11	,	,	,
cord-022053-idft1p6d	185	12	which	which	WDT
cord-022053-idft1p6d	185	13	is	be	VBZ
cord-022053-idft1p6d	185	14	reported	report	VBN
cord-022053-idft1p6d	185	15	to	to	TO
cord-022053-idft1p6d	185	16	target	target	VB
cord-022053-idft1p6d	185	17	Acinetobacter	Acinetobacter	NNP
cord-022053-idft1p6d	185	18	baumannii	baumannii	NN
cord-022053-idft1p6d	185	19	,	,	,
cord-022053-idft1p6d	185	20	E.	E.	NNP
cord-022053-idft1p6d	185	21	faecium	faecium	NNP
cord-022053-idft1p6d	185	22	,	,	,
cord-022053-idft1p6d	185	23	K.	K.	NNP
cord-022053-idft1p6d	185	24	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	185	25	,	,	,
cord-022053-idft1p6d	185	26	P.	P.	NNP
cord-022053-idft1p6d	185	27	aeruginosa	aeruginosa	NN
cord-022053-idft1p6d	185	28	,	,	,
cord-022053-idft1p6d	185	29	and	and	CC
cord-022053-idft1p6d	185	30	SA	SA	NNP
cord-022053-idft1p6d	185	31	.	.	.
cord-022053-idft1p6d	186	1	67	67	CD
cord-022053-idft1p6d	187	1	Although	although	IN
cord-022053-idft1p6d	187	2	PCR	PCR	NNP
cord-022053-idft1p6d	187	3	remains	remain	VBZ
cord-022053-idft1p6d	187	4	the	the	DT
cord-022053-idft1p6d	187	5	most	most	RBS
cord-022053-idft1p6d	187	6	common	common	JJ
cord-022053-idft1p6d	187	7	means	mean	NNS
cord-022053-idft1p6d	187	8	of	of	IN
cord-022053-idft1p6d	187	9	nucleic	nucleic	JJ
cord-022053-idft1p6d	187	10	acid	acid	NN
cord-022053-idft1p6d	187	11	amplification	amplification	NN
cord-022053-idft1p6d	187	12	,	,	,
cord-022053-idft1p6d	187	13	other	other	JJ
cord-022053-idft1p6d	187	14	technologies	technology	NNS
cord-022053-idft1p6d	187	15	have	have	VBP
cord-022053-idft1p6d	187	16	been	be	VBN
cord-022053-idft1p6d	187	17	developed	develop	VBN
cord-022053-idft1p6d	187	18	that	that	WDT
cord-022053-idft1p6d	187	19	address	address	NN
cord-022053-idft1p6d	187	20	the	the	DT
cord-022053-idft1p6d	187	21	presence	presence	NN
cord-022053-idft1p6d	187	22	of	of	IN
cord-022053-idft1p6d	187	23	single	single	JJ
cord-022053-idft1p6d	187	24	targets	target	NNS
cord-022053-idft1p6d	187	25	.	.	.
cord-022053-idft1p6d	188	1	Transcription	transcription	NN
cord-022053-idft1p6d	188	2	-	-	HYPH
cord-022053-idft1p6d	188	3	mediated	mediate	VBN
cord-022053-idft1p6d	188	4	amplification	amplification	NN
cord-022053-idft1p6d	188	5	(	(	-LRB-
cord-022053-idft1p6d	188	6	TMA	TMA	NNP
cord-022053-idft1p6d	188	7	)	)	-RRB-
cord-022053-idft1p6d	188	8	has	have	VBZ
cord-022053-idft1p6d	188	9	been	be	VBN
cord-022053-idft1p6d	188	10	applied	apply	VBN
cord-022053-idft1p6d	188	11	to	to	IN
cord-022053-idft1p6d	188	12	mycobacteria	mycobacterium	NNS
cord-022053-idft1p6d	188	13	,	,	,
cord-022053-idft1p6d	188	14	HCV	HCV	NNP
cord-022053-idft1p6d	188	15	,	,	,
cord-022053-idft1p6d	188	16	E.	E.	NNP
cord-022053-idft1p6d	188	17	coli	coli	NNS
cord-022053-idft1p6d	188	18	,	,	,
cord-022053-idft1p6d	188	19	and	and	CC
cord-022053-idft1p6d	188	20	Listeria	Listeria	NNP
cord-022053-idft1p6d	188	21	,	,	,
cord-022053-idft1p6d	188	22	where	where	WRB
cord-022053-idft1p6d	188	23	RNA	RNA	NNP
cord-022053-idft1p6d	188	24	is	be	VBZ
cord-022053-idft1p6d	188	25	bound	bind	VBN
cord-022053-idft1p6d	188	26	by	by	IN
cord-022053-idft1p6d	188	27	a	a	DT
cord-022053-idft1p6d	188	28	target	target	NN
cord-022053-idft1p6d	188	29	oligo	oligo	NN
cord-022053-idft1p6d	188	30	and	and	CC
cord-022053-idft1p6d	188	31	then	then	RB
cord-022053-idft1p6d	188	32	acted	act	VBD
cord-022053-idft1p6d	188	33	upon	upon	IN
cord-022053-idft1p6d	188	34	,	,	,
cord-022053-idft1p6d	188	35	in	in	IN
cord-022053-idft1p6d	188	36	sequence	sequence	NN
cord-022053-idft1p6d	188	37	,	,	,
cord-022053-idft1p6d	188	38	by	by	IN
cord-022053-idft1p6d	188	39	reverse	reverse	JJ
cord-022053-idft1p6d	188	40	transcriptase	transcriptase	NN
cord-022053-idft1p6d	188	41	(	(	-LRB-
cord-022053-idft1p6d	188	42	RT	RT	NNP
cord-022053-idft1p6d	188	43	)	)	-RRB-
cord-022053-idft1p6d	188	44	(	(	-LRB-
cord-022053-idft1p6d	188	45	to	to	TO
cord-022053-idft1p6d	188	46	produce	produce	VB
cord-022053-idft1p6d	188	47	cDNA	cDNA	NNP
cord-022053-idft1p6d	188	48	)	)	-RRB-
cord-022053-idft1p6d	188	49	,	,	,
cord-022053-idft1p6d	188	50	RNase	rnase	NN
cord-022053-idft1p6d	188	51	H	h	NN
cord-022053-idft1p6d	188	52	(	(	-LRB-
cord-022053-idft1p6d	188	53	to	to	TO
cord-022053-idft1p6d	188	54	degrade	degrade	VB
cord-022053-idft1p6d	188	55	RNA	RNA	NNP
cord-022053-idft1p6d	188	56	template	template	NN
cord-022053-idft1p6d	188	57	)	)	-RRB-
cord-022053-idft1p6d	188	58	,	,	,
cord-022053-idft1p6d	188	59	RT	RT	NNP
cord-022053-idft1p6d	188	60	again	again	RB
cord-022053-idft1p6d	188	61	to	to	TO
cord-022053-idft1p6d	188	62	produce	produce	VB
cord-022053-idft1p6d	188	63	a	a	DT
cord-022053-idft1p6d	188	64	double	double	RB
cord-022053-idft1p6d	188	65	-	-	HYPH
cord-022053-idft1p6d	188	66	stranded	strand	VBN
cord-022053-idft1p6d	188	67	DNA	dna	NN
cord-022053-idft1p6d	188	68	promoter	promoter	NN
cord-022053-idft1p6d	188	69	sequence	sequence	NN
cord-022053-idft1p6d	188	70	,	,	,
cord-022053-idft1p6d	188	71	and	and	CC
cord-022053-idft1p6d	188	72	then	then	RB
cord-022053-idft1p6d	188	73	RNA	RNA	NNP
cord-022053-idft1p6d	188	74	polymerase	polymerase	NN
cord-022053-idft1p6d	188	75	to	to	TO
cord-022053-idft1p6d	188	76	produce	produce	VB
cord-022053-idft1p6d	188	77	many	many	JJ
cord-022053-idft1p6d	188	78	copies	copy	NNS
cord-022053-idft1p6d	188	79	of	of	IN
cord-022053-idft1p6d	188	80	single	single	RB
cord-022053-idft1p6d	188	81	-	-	HYPH
cord-022053-idft1p6d	188	82	stranded	strand	VBN
cord-022053-idft1p6d	188	83	RNA	RNA	NNP
cord-022053-idft1p6d	188	84	-	-	:
cord-022053-idft1p6d	188	85	then	then	RB
cord-022053-idft1p6d	188	86	the	the	DT
cord-022053-idft1p6d	188	87	process	process	NN
cord-022053-idft1p6d	188	88	repeats	repeat	VBZ
cord-022053-idft1p6d	188	89	itself	-PRON-	PRP
cord-022053-idft1p6d	188	90	.	.	.
cord-022053-idft1p6d	189	1	Another	another	DT
cord-022053-idft1p6d	189	2	isothermal	isothermal	JJ
cord-022053-idft1p6d	189	3	reaction	reaction	NN
cord-022053-idft1p6d	189	4	occurs	occur	VBZ
cord-022053-idft1p6d	189	5	in	in	IN
cord-022053-idft1p6d	189	6	loop	loop	NN
cord-022053-idft1p6d	189	7	-	-	HYPH
cord-022053-idft1p6d	189	8	mediated	mediate	VBN
cord-022053-idft1p6d	189	9	isothermal	isothermal	JJ
cord-022053-idft1p6d	189	10	amplification	amplification	NN
cord-022053-idft1p6d	189	11	,	,	,
cord-022053-idft1p6d	189	12	which	which	WDT
cord-022053-idft1p6d	189	13	uses	use	VBZ
cord-022053-idft1p6d	189	14	a	a	DT
cord-022053-idft1p6d	189	15	group	group	NN
cord-022053-idft1p6d	189	16	of	of	IN
cord-022053-idft1p6d	189	17	four	four	CD
cord-022053-idft1p6d	189	18	to	to	TO
cord-022053-idft1p6d	189	19	six	six	CD
cord-022053-idft1p6d	189	20	primers	primer	NNS
cord-022053-idft1p6d	189	21	and	and	CC
cord-022053-idft1p6d	189	22	Bst	Bst	NNP
cord-022053-idft1p6d	189	23	DNA	DNA	NNP
cord-022053-idft1p6d	189	24	polymerase	polymerase	NN
cord-022053-idft1p6d	189	25	,	,	,
cord-022053-idft1p6d	189	26	with	with	IN
cord-022053-idft1p6d	189	27	the	the	DT
cord-022053-idft1p6d	189	28	creation	creation	NN
cord-022053-idft1p6d	189	29	of	of	IN
cord-022053-idft1p6d	189	30	complimentary	complimentary	JJ
cord-022053-idft1p6d	189	31	sites	site	NNS
cord-022053-idft1p6d	189	32	to	to	TO
cord-022053-idft1p6d	189	33	generate	generate	VB
cord-022053-idft1p6d	189	34	exponentially	exponentially	RB
cord-022053-idft1p6d	189	35	amplified	amplify	VBN
cord-022053-idft1p6d	189	36	loop	loop	NN
cord-022053-idft1p6d	189	37	structures	structure	NNS
cord-022053-idft1p6d	189	38	.	.	.
cord-022053-idft1p6d	190	1	These	these	DT
cord-022053-idft1p6d	190	2	assays	assay	NNS
cord-022053-idft1p6d	190	3	have	have	VBP
cord-022053-idft1p6d	190	4	been	be	VBN
cord-022053-idft1p6d	190	5	developed	develop	VBN
cord-022053-idft1p6d	190	6	for	for	IN
cord-022053-idft1p6d	190	7	a	a	DT
cord-022053-idft1p6d	190	8	wide	wide	JJ
cord-022053-idft1p6d	190	9	range	range	NN
cord-022053-idft1p6d	190	10	of	of	IN
cord-022053-idft1p6d	190	11	targets	target	NNS
cord-022053-idft1p6d	190	12	and	and	CC
cord-022053-idft1p6d	190	13	produce	produce	VB
cord-022053-idft1p6d	190	14	larger	large	JJR
cord-022053-idft1p6d	190	15	quantities	quantity	NNS
cord-022053-idft1p6d	190	16	of	of	IN
cord-022053-idft1p6d	190	17	DNA	dna	NN
cord-022053-idft1p6d	190	18	than	than	IN
cord-022053-idft1p6d	190	19	traditional	traditional	JJ
cord-022053-idft1p6d	190	20	PCR	pcr	NN
cord-022053-idft1p6d	190	21	in	in	IN
cord-022053-idft1p6d	190	22	a	a	DT
cord-022053-idft1p6d	190	23	matter	matter	NN
cord-022053-idft1p6d	190	24	of	of	IN
cord-022053-idft1p6d	190	25	minutes	minute	NNS
cord-022053-idft1p6d	190	26	to	to	IN
cord-022053-idft1p6d	190	27	hours	hour	NNS
cord-022053-idft1p6d	190	28	.	.	.
cord-022053-idft1p6d	191	1	This	this	DT
cord-022053-idft1p6d	191	2	technique	technique	NN
cord-022053-idft1p6d	191	3	has	have	VBZ
cord-022053-idft1p6d	191	4	been	be	VBN
cord-022053-idft1p6d	191	5	applied	apply	VBN
cord-022053-idft1p6d	191	6	to	to	IN
cord-022053-idft1p6d	191	7	viruses	virus	NNS
cord-022053-idft1p6d	191	8	,	,	,
cord-022053-idft1p6d	191	9	bacteria	bacteria	NNS
cord-022053-idft1p6d	191	10	,	,	,
cord-022053-idft1p6d	191	11	protists	protist	NNS
cord-022053-idft1p6d	191	12	,	,	,
cord-022053-idft1p6d	191	13	fungi	fungus	NNS
cord-022053-idft1p6d	191	14	,	,	,
cord-022053-idft1p6d	191	15	and	and	CC
cord-022053-idft1p6d	191	16	mycobacteria	mycobacterium	NNS
cord-022053-idft1p6d	191	17	in	in	IN
cord-022053-idft1p6d	191	18	a	a	DT
cord-022053-idft1p6d	191	19	point	point	NN
cord-022053-idft1p6d	191	20	of	of	IN
cord-022053-idft1p6d	191	21	care	care	NN
cord-022053-idft1p6d	191	22	manner	manner	NN
cord-022053-idft1p6d	191	23	.	.	.
cord-022053-idft1p6d	192	1	[	[	-LRB-
cord-022053-idft1p6d	192	2	68	68	CD
cord-022053-idft1p6d	192	3	]	]	-RRB-
cord-022053-idft1p6d	192	4	[	[	-LRB-
cord-022053-idft1p6d	192	5	69	69	CD
cord-022053-idft1p6d	192	6	]	]	-RRB-
cord-022053-idft1p6d	192	7	[	[	-LRB-
cord-022053-idft1p6d	192	8	70	70	CD
cord-022053-idft1p6d	192	9	]	]	-RRB-
cord-022053-idft1p6d	192	10	[	[	-LRB-
cord-022053-idft1p6d	192	11	71	71	CD
cord-022053-idft1p6d	192	12	]	]	-RRB-
cord-022053-idft1p6d	193	1	[	[	-LRB-
cord-022053-idft1p6d	193	2	72	72	CD
cord-022053-idft1p6d	193	3	]	]	-RRB-
cord-022053-idft1p6d	193	4	LAMP	lamp	NN
cord-022053-idft1p6d	193	5	techniques	technique	NNS
cord-022053-idft1p6d	193	6	are	be	VBP
cord-022053-idft1p6d	193	7	limited	limit	VBN
cord-022053-idft1p6d	193	8	by	by	IN
cord-022053-idft1p6d	193	9	the	the	DT
cord-022053-idft1p6d	193	10	challenges	challenge	NNS
cord-022053-idft1p6d	193	11	of	of	IN
cord-022053-idft1p6d	193	12	complex	complex	JJ
cord-022053-idft1p6d	193	13	primer	primer	NN
cord-022053-idft1p6d	193	14	design	design	NN
cord-022053-idft1p6d	193	15	,	,	,
cord-022053-idft1p6d	193	16	limited	limited	JJ
cord-022053-idft1p6d	193	17	ability	ability	NN
cord-022053-idft1p6d	193	18	to	to	TO
cord-022053-idft1p6d	193	19	multiplex	multiplex	NN
cord-022053-idft1p6d	193	20	,	,	,
cord-022053-idft1p6d	193	21	and	and	CC
cord-022053-idft1p6d	193	22	common	common	JJ
cord-022053-idft1p6d	193	23	inhibitors	inhibitor	NNS
cord-022053-idft1p6d	193	24	of	of	IN
cord-022053-idft1p6d	193	25	the	the	DT
cord-022053-idft1p6d	193	26	enzymes	enzyme	NNS
cord-022053-idft1p6d	193	27	in	in	IN
cord-022053-idft1p6d	193	28	certain	certain	JJ
cord-022053-idft1p6d	193	29	human	human	JJ
cord-022053-idft1p6d	193	30	samples	sample	NNS
cord-022053-idft1p6d	193	31	,	,	,
cord-022053-idft1p6d	193	32	including	include	VBG
cord-022053-idft1p6d	193	33	blood	blood	NN
cord-022053-idft1p6d	193	34	.	.	.
cord-022053-idft1p6d	194	1	A	a	DT
cord-022053-idft1p6d	194	2	last	last	JJ
cord-022053-idft1p6d	194	3	isothermal	isothermal	JJ
cord-022053-idft1p6d	194	4	amplification	amplification	NN
cord-022053-idft1p6d	194	5	is	be	VBZ
cord-022053-idft1p6d	194	6	Massachusetts	Massachusetts	NNP
cord-022053-idft1p6d	194	7	)	)	-RRB-
cord-022053-idft1p6d	194	8	and	and	CC
cord-022053-idft1p6d	194	9	consist	consist	VBP
cord-022053-idft1p6d	194	10	of	of	IN
cord-022053-idft1p6d	194	11	single	single	RB
cord-022053-idft1p6d	194	12	-	-	HYPH
cord-022053-idft1p6d	194	13	stranded	strand	VBN
cord-022053-idft1p6d	194	14	DNA	dna	NN
cord-022053-idft1p6d	194	15	probes	probe	NNS
cord-022053-idft1p6d	194	16	tagged	tag	VBN
cord-022053-idft1p6d	194	17	with	with	IN
cord-022053-idft1p6d	194	18	acridinium	acridinium	NNP
cord-022053-idft1p6d	194	19	esters	ester	NNS
cord-022053-idft1p6d	194	20	that	that	WDT
cord-022053-idft1p6d	194	21	hybridize	hybridize	VBP
cord-022053-idft1p6d	194	22	to	to	IN
cord-022053-idft1p6d	194	23	rRNA	rRNA	NNP
cord-022053-idft1p6d	194	24	.	.	.
cord-022053-idft1p6d	195	1	Tests	test	NNS
cord-022053-idft1p6d	195	2	are	be	VBP
cord-022053-idft1p6d	195	3	read	read	VBN
cord-022053-idft1p6d	195	4	in	in	IN
cord-022053-idft1p6d	195	5	a	a	DT
cord-022053-idft1p6d	195	6	luminometer	luminometer	NN
cord-022053-idft1p6d	195	7	.	.	.
cord-022053-idft1p6d	196	1	Because	because	IN
cord-022053-idft1p6d	196	2	there	there	EX
cord-022053-idft1p6d	196	3	is	be	VBZ
cord-022053-idft1p6d	196	4	no	no	DT
cord-022053-idft1p6d	196	5	amplification	amplification	NN
cord-022053-idft1p6d	196	6	,	,	,
cord-022053-idft1p6d	196	7	probe	probe	NN
cord-022053-idft1p6d	196	8	-	-	HYPH
cord-022053-idft1p6d	196	9	based	base	VBN
cord-022053-idft1p6d	196	10	assays	assay	NNS
cord-022053-idft1p6d	196	11	generally	generally	RB
cord-022053-idft1p6d	196	12	suffer	suffer	VBP
cord-022053-idft1p6d	196	13	low	low	JJ
cord-022053-idft1p6d	196	14	sensitivity	sensitivity	NN
cord-022053-idft1p6d	196	15	and	and	CC
cord-022053-idft1p6d	196	16	are	be	VBP
cord-022053-idft1p6d	196	17	reserved	reserve	VBN
cord-022053-idft1p6d	196	18	for	for	IN
cord-022053-idft1p6d	196	19	culture	culture	NN
cord-022053-idft1p6d	196	20	confirmation	confirmation	NN
cord-022053-idft1p6d	196	21	,	,	,
cord-022053-idft1p6d	196	22	where	where	WRB
cord-022053-idft1p6d	196	23	organisms	organism	NNS
cord-022053-idft1p6d	196	24	are	be	VBP
cord-022053-idft1p6d	196	25	present	present	JJ
cord-022053-idft1p6d	196	26	in	in	IN
cord-022053-idft1p6d	196	27	high	high	JJ
cord-022053-idft1p6d	196	28	numbers	number	NNS
cord-022053-idft1p6d	196	29	.	.	.
cord-022053-idft1p6d	197	1	AdvanDX	advandx	NN
cord-022053-idft1p6d	197	2	(	(	-LRB-
cord-022053-idft1p6d	197	3	Woburn	Woburn	NNP
cord-022053-idft1p6d	197	4	,	,	,
cord-022053-idft1p6d	197	5	Massachusetts	Massachusetts	NNP
cord-022053-idft1p6d	197	6	)	)	-RRB-
cord-022053-idft1p6d	197	7	has	have	VBZ
cord-022053-idft1p6d	197	8	produced	produce	VBN
cord-022053-idft1p6d	197	9	a	a	DT
cord-022053-idft1p6d	197	10	series	series	NN
cord-022053-idft1p6d	197	11	of	of	IN
cord-022053-idft1p6d	197	12	probe	probe	NN
cord-022053-idft1p6d	197	13	-	-	HYPH
cord-022053-idft1p6d	197	14	based	base	VBN
cord-022053-idft1p6d	197	15	assays	assay	NNS
cord-022053-idft1p6d	197	16	using	use	VBG
cord-022053-idft1p6d	197	17	peptide	peptide	NN
cord-022053-idft1p6d	197	18	nucleic	nucleic	JJ
cord-022053-idft1p6d	197	19	acid	acid	NN
cord-022053-idft1p6d	197	20	(	(	-LRB-
cord-022053-idft1p6d	197	21	PNA	PNA	NNP
cord-022053-idft1p6d	197	22	)	)	-RRB-
cord-022053-idft1p6d	197	23	probes	probe	NNS
cord-022053-idft1p6d	197	24	tagged	tag	VBN
cord-022053-idft1p6d	197	25	with	with	IN
cord-022053-idft1p6d	197	26	fluorescent	fluorescent	JJ
cord-022053-idft1p6d	197	27	markers	marker	NNS
cord-022053-idft1p6d	197	28	.	.	.
cord-022053-idft1p6d	198	1	46	46	CD
cord-022053-idft1p6d	198	2	PNA	PNA	NNP
cord-022053-idft1p6d	198	3	probes	probe	NNS
cord-022053-idft1p6d	198	4	have	have	VBP
cord-022053-idft1p6d	198	5	several	several	JJ
cord-022053-idft1p6d	198	6	advantages	advantage	NNS
cord-022053-idft1p6d	198	7	over	over	IN
cord-022053-idft1p6d	198	8	traditional	traditional	JJ
cord-022053-idft1p6d	198	9	DNA	dna	NN
cord-022053-idft1p6d	198	10	probes	probe	NNS
cord-022053-idft1p6d	198	11	,	,	,
cord-022053-idft1p6d	198	12	such	such	JJ
cord-022053-idft1p6d	198	13	as	as	IN
cord-022053-idft1p6d	198	14	increased	increase	VBN
cord-022053-idft1p6d	198	15	stability	stability	NN
cord-022053-idft1p6d	198	16	and	and	CC
cord-022053-idft1p6d	198	17	ability	ability	NN
cord-022053-idft1p6d	198	18	to	to	TO
cord-022053-idft1p6d	198	19	penetrate	penetrate	VB
cord-022053-idft1p6d	198	20	the	the	DT
cord-022053-idft1p6d	198	21	bacterial	bacterial	JJ
cord-022053-idft1p6d	198	22	cell	cell	NN
cord-022053-idft1p6d	198	23	wall	wall	NN
cord-022053-idft1p6d	198	24	.	.	.
cord-022053-idft1p6d	199	1	Fluorescent	fluorescent	JJ
cord-022053-idft1p6d	199	2	tags	tag	NNS
cord-022053-idft1p6d	199	3	have	have	VBP
cord-022053-idft1p6d	199	4	the	the	DT
cord-022053-idft1p6d	199	5	added	add	VBN
cord-022053-idft1p6d	199	6	advantage	advantage	NN
cord-022053-idft1p6d	199	7	of	of	IN
cord-022053-idft1p6d	199	8	allowing	allow	VBG
cord-022053-idft1p6d	199	9	for	for	IN
cord-022053-idft1p6d	199	10	multicolor	multicolor	JJ
cord-022053-idft1p6d	199	11	detection	detection	NN
cord-022053-idft1p6d	199	12	and	and	CC
cord-022053-idft1p6d	199	13	the	the	DT
cord-022053-idft1p6d	199	14	creation	creation	NN
cord-022053-idft1p6d	199	15	of	of	IN
cord-022053-idft1p6d	199	16	limited	limited	JJ
cord-022053-idft1p6d	199	17	panels	panel	NNS
cord-022053-idft1p6d	199	18	.	.	.
cord-022053-idft1p6d	200	1	These	these	DT
cord-022053-idft1p6d	200	2	are	be	VBP
cord-022053-idft1p6d	200	3	rapid	rapid	JJ
cord-022053-idft1p6d	200	4	assays	assay	NNS
cord-022053-idft1p6d	200	5	(	(	-LRB-
cord-022053-idft1p6d	200	6	less	less	JJR
cord-022053-idft1p6d	200	7	than	than	IN
cord-022053-idft1p6d	200	8	1	1	CD
cord-022053-idft1p6d	200	9	hour	hour	NN
cord-022053-idft1p6d	200	10	)	)	-RRB-
cord-022053-idft1p6d	200	11	and	and	CC
cord-022053-idft1p6d	200	12	are	be	VBP
cord-022053-idft1p6d	200	13	mostly	mostly	RB
cord-022053-idft1p6d	200	14	targeted	target	VBN
cord-022053-idft1p6d	200	15	towards	towards	IN
cord-022053-idft1p6d	200	16	rapid	rapid	JJ
cord-022053-idft1p6d	200	17	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	200	18	of	of	IN
cord-022053-idft1p6d	200	19	positive	positive	JJ
cord-022053-idft1p6d	200	20	blood	blood	NN
cord-022053-idft1p6d	200	21	culture	culture	NN
cord-022053-idft1p6d	200	22	bottles	bottle	NNS
cord-022053-idft1p6d	200	23	.	.	.
cord-022053-idft1p6d	201	1	[	[	-LRB-
cord-022053-idft1p6d	201	2	51	51	CD
cord-022053-idft1p6d	201	3	]	]	-RRB-
cord-022053-idft1p6d	201	4	[	[	-LRB-
cord-022053-idft1p6d	201	5	52	52	CD
cord-022053-idft1p6d	201	6	]	]	-RRB-
cord-022053-idft1p6d	202	1	[	[	-LRB-
cord-022053-idft1p6d	202	2	53	53	CD
cord-022053-idft1p6d	202	3	]	]	-RRB-
cord-022053-idft1p6d	202	4	[	[	-LRB-
cord-022053-idft1p6d	202	5	54	54	CD
cord-022053-idft1p6d	202	6	]	]	-RRB-
cord-022053-idft1p6d	203	1	In	in	IN
cord-022053-idft1p6d	203	2	situ	situ	NN
cord-022053-idft1p6d	203	3	hybridization	hybridization	NN
cord-022053-idft1p6d	203	4	(	(	-LRB-
cord-022053-idft1p6d	203	5	ISH	ISH	NNP
cord-022053-idft1p6d	203	6	)	)	-RRB-
cord-022053-idft1p6d	203	7	of	of	IN
cord-022053-idft1p6d	203	8	Epstein	Epstein	NNP
cord-022053-idft1p6d	203	9	Barr	Barr	NNP
cord-022053-idft1p6d	203	10	encoding	encoding	NN
cord-022053-idft1p6d	203	11	region	region	NN
cord-022053-idft1p6d	203	12	for	for	IN
cord-022053-idft1p6d	203	13	confirmation	confirmation	NN
cord-022053-idft1p6d	203	14	of	of	IN
cord-022053-idft1p6d	203	15	Epstein	Epstein	NNP
cord-022053-idft1p6d	203	16	-	-	HYPH
cord-022053-idft1p6d	203	17	Barr	Barr	NNP
cord-022053-idft1p6d	203	18	virus	virus	NN
cord-022053-idft1p6d	203	19	infection	infection	NN
cord-022053-idft1p6d	203	20	on	on	IN
cord-022053-idft1p6d	203	21	FFPE	FFPE	NNP
cord-022053-idft1p6d	203	22	is	be	VBZ
cord-022053-idft1p6d	203	23	routinely	routinely	RB
cord-022053-idft1p6d	203	24	used	use	VBN
cord-022053-idft1p6d	203	25	in	in	IN
cord-022053-idft1p6d	203	26	cancer	cancer	NN
cord-022053-idft1p6d	203	27	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	203	28	,	,	,
cord-022053-idft1p6d	203	29	but	but	CC
cord-022053-idft1p6d	203	30	few	few	JJ
cord-022053-idft1p6d	203	31	,	,	,
cord-022053-idft1p6d	203	32	if	if	IN
cord-022053-idft1p6d	203	33	any	any	DT
cord-022053-idft1p6d	203	34	,	,	,
cord-022053-idft1p6d	203	35	other	other	JJ
cord-022053-idft1p6d	203	36	common	common	JJ
cord-022053-idft1p6d	203	37	viral	viral	JJ
cord-022053-idft1p6d	203	38	infections	infection	NNS
cord-022053-idft1p6d	203	39	are	be	VBP
cord-022053-idft1p6d	203	40	confirmed	confirm	VBN
cord-022053-idft1p6d	203	41	this	this	DT
cord-022053-idft1p6d	203	42	way	way	NN
cord-022053-idft1p6d	203	43	,	,	,
cord-022053-idft1p6d	203	44	with	with	IN
cord-022053-idft1p6d	203	45	IHC	IHC	NNP
cord-022053-idft1p6d	203	46	being	be	VBG
cord-022053-idft1p6d	203	47	preferred	prefer	VBN
cord-022053-idft1p6d	203	48	.	.	.
cord-022053-idft1p6d	204	1	Application	Application	NNP
cord-022053-idft1p6d	204	2	of	of	IN
cord-022053-idft1p6d	204	3	RNA	RNA	NNP
cord-022053-idft1p6d	204	4	-	-	HYPH
cord-022053-idft1p6d	204	5	ISH	ISH	NNP
cord-022053-idft1p6d	204	6	to	to	IN
cord-022053-idft1p6d	204	7	Aspergillus	aspergillus	NN
cord-022053-idft1p6d	204	8	and	and	CC
cord-022053-idft1p6d	204	9	Candida	Candida	NNP
cord-022053-idft1p6d	204	10	in	in	IN
cord-022053-idft1p6d	204	11	FFPE	FFPE	NNP
cord-022053-idft1p6d	204	12	showed	show	VBD
cord-022053-idft1p6d	204	13	less	less	JJR
cord-022053-idft1p6d	204	14	sensitivity	sensitivity	NN
cord-022053-idft1p6d	204	15	than	than	IN
cord-022053-idft1p6d	204	16	real	real	JJ
cord-022053-idft1p6d	204	17	-	-	HYPH
cord-022053-idft1p6d	204	18	time	time	NN
cord-022053-idft1p6d	204	19	PCR	pcr	NN
cord-022053-idft1p6d	204	20	with	with	IN
cord-022053-idft1p6d	204	21	sequencing	sequencing	NN
cord-022053-idft1p6d	204	22	(	(	-LRB-
cord-022053-idft1p6d	204	23	gold	gold	NN
cord-022053-idft1p6d	204	24	standard	standard	NN
cord-022053-idft1p6d	204	25	)	)	-RRB-
cord-022053-idft1p6d	204	26	,	,	,
cord-022053-idft1p6d	204	27	although	although	IN
cord-022053-idft1p6d	204	28	some	some	DT
cord-022053-idft1p6d	204	29	FISH	fish	NN
cord-022053-idft1p6d	204	30	-	-	HYPH
cord-022053-idft1p6d	204	31	positive	positive	JJ
cord-022053-idft1p6d	204	32	,	,	,
cord-022053-idft1p6d	204	33	PCRnegative	pcrnegative	JJ
cord-022053-idft1p6d	204	34	cases	case	NNS
cord-022053-idft1p6d	204	35	with	with	IN
cord-022053-idft1p6d	204	36	obvious	obvious	JJ
cord-022053-idft1p6d	204	37	fungal	fungal	JJ
cord-022053-idft1p6d	204	38	elements	element	NNS
cord-022053-idft1p6d	204	39	were	be	VBD
cord-022053-idft1p6d	204	40	seen	see	VBN
cord-022053-idft1p6d	204	41	,	,	,
cord-022053-idft1p6d	204	42	suggesting	suggest	VBG
cord-022053-idft1p6d	204	43	refinements	refinement	NNS
cord-022053-idft1p6d	204	44	of	of	IN
cord-022053-idft1p6d	204	45	this	this	DT
cord-022053-idft1p6d	204	46	technique	technique	NN
cord-022053-idft1p6d	204	47	may	may	MD
cord-022053-idft1p6d	204	48	be	be	VB
cord-022053-idft1p6d	204	49	valuable	valuable	JJ
cord-022053-idft1p6d	204	50	for	for	IN
cord-022053-idft1p6d	204	51	rapid	rapid	JJ
cord-022053-idft1p6d	204	52	identification	identification	NN
cord-022053-idft1p6d	204	53	of	of	IN
cord-022053-idft1p6d	204	54	these	these	DT
cord-022053-idft1p6d	204	55	common	common	JJ
cord-022053-idft1p6d	204	56	organisms	organism	NNS
cord-022053-idft1p6d	204	57	,	,	,
cord-022053-idft1p6d	204	58	especially	especially	RB
cord-022053-idft1p6d	204	59	if	if	IN
cord-022053-idft1p6d	204	60	mucormycosis	mucormycosis	NN
cord-022053-idft1p6d	204	61	is	be	VBZ
cord-022053-idft1p6d	204	62	in	in	IN
cord-022053-idft1p6d	204	63	the	the	DT
cord-022053-idft1p6d	204	64	differential	differential	NN
cord-022053-idft1p6d	204	65	.	.	.
cord-022053-idft1p6d	205	1	55	55	CD
cord-022053-idft1p6d	206	1	A	a	DT
cord-022053-idft1p6d	206	2	unique	unique	JJ
cord-022053-idft1p6d	206	3	probe	probe	NN
cord-022053-idft1p6d	206	4	-	-	HYPH
cord-022053-idft1p6d	206	5	based	base	VBN
cord-022053-idft1p6d	206	6	approached	approach	VBD
cord-022053-idft1p6d	206	7	to	to	IN
cord-022053-idft1p6d	206	8	nucleic	nucleic	JJ
cord-022053-idft1p6d	206	9	acid	acid	NN
cord-022053-idft1p6d	206	10	detection	detection	NN
cord-022053-idft1p6d	206	11	is	be	VBZ
cord-022053-idft1p6d	206	12	the	the	DT
cord-022053-idft1p6d	206	13	RNA	RNA	NNP
cord-022053-idft1p6d	206	14	hybridization	hybridization	NN
cord-022053-idft1p6d	206	15	and	and	CC
cord-022053-idft1p6d	206	16	digital	digital	JJ
cord-022053-idft1p6d	206	17	counting	counting	NN
cord-022053-idft1p6d	206	18	technology	technology	NN
cord-022053-idft1p6d	206	19	offered	offer	VBN
cord-022053-idft1p6d	206	20	by	by	IN
cord-022053-idft1p6d	206	21	NanoString	NanoString	NNP
cord-022053-idft1p6d	206	22	(	(	-LRB-
cord-022053-idft1p6d	206	23	Seattle	Seattle	NNP
cord-022053-idft1p6d	206	24	,	,	,
cord-022053-idft1p6d	206	25	Washington	Washington	NNP
cord-022053-idft1p6d	206	26	)	)	-RRB-
cord-022053-idft1p6d	206	27	.	.	.
cord-022053-idft1p6d	207	1	This	this	DT
cord-022053-idft1p6d	207	2	method	method	NN
cord-022053-idft1p6d	207	3	uses	use	VBZ
cord-022053-idft1p6d	207	4	a	a	DT
cord-022053-idft1p6d	207	5	capture	capture	NN
cord-022053-idft1p6d	207	6	probe	probe	NN
cord-022053-idft1p6d	207	7	(	(	-LRB-
cord-022053-idft1p6d	207	8	usually	usually	RB
cord-022053-idft1p6d	207	9	a	a	DT
cord-022053-idft1p6d	207	10	specific	specific	JJ
cord-022053-idft1p6d	207	11	50-mer	50-mer	CD
cord-022053-idft1p6d	207	12	)	)	-RRB-
cord-022053-idft1p6d	207	13	and	and	CC
cord-022053-idft1p6d	207	14	a	a	DT
cord-022053-idft1p6d	207	15	reporter	reporter	NN
cord-022053-idft1p6d	207	16	probe	probe	NN
cord-022053-idft1p6d	207	17	(	(	-LRB-
cord-022053-idft1p6d	207	18	a	a	DT
cord-022053-idft1p6d	207	19	second	second	JJ
cord-022053-idft1p6d	207	20	,	,	,
cord-022053-idft1p6d	207	21	adjacent	adjacent	JJ
cord-022053-idft1p6d	207	22	,	,	,
cord-022053-idft1p6d	207	23	specific	specific	JJ
cord-022053-idft1p6d	207	24	50-mer	50-mer	CD
cord-022053-idft1p6d	207	25	attached	attach	VBN
cord-022053-idft1p6d	207	26	to	to	IN
cord-022053-idft1p6d	207	27	a	a	DT
cord-022053-idft1p6d	207	28	unique	unique	JJ
cord-022053-idft1p6d	207	29	molecular	molecular	JJ
cord-022053-idft1p6d	207	30	color	color	NN
cord-022053-idft1p6d	207	31	barcode	barcode	NN
cord-022053-idft1p6d	207	32	)	)	-RRB-
cord-022053-idft1p6d	207	33	to	to	TO
cord-022053-idft1p6d	207	34	bind	bind	VB
cord-022053-idft1p6d	207	35	up	up	RP
cord-022053-idft1p6d	207	36	individual	individual	JJ
cord-022053-idft1p6d	207	37	molecules	molecule	NNS
cord-022053-idft1p6d	207	38	of	of	IN
cord-022053-idft1p6d	207	39	RNA	RNA	NNP
cord-022053-idft1p6d	207	40	in	in	IN
cord-022053-idft1p6d	207	41	a	a	DT
cord-022053-idft1p6d	207	42	sample	sample	NN
cord-022053-idft1p6d	207	43	,	,	,
cord-022053-idft1p6d	207	44	capture	capture	VB
cord-022053-idft1p6d	207	45	them	-PRON-	PRP
cord-022053-idft1p6d	207	46	on	on	IN
cord-022053-idft1p6d	207	47	a	a	DT
cord-022053-idft1p6d	207	48	solid	solid	JJ
cord-022053-idft1p6d	207	49	state	state	NN
cord-022053-idft1p6d	207	50	matrix	matrix	NN
cord-022053-idft1p6d	207	51	,	,	,
cord-022053-idft1p6d	207	52	and	and	CC
cord-022053-idft1p6d	207	53	use	use	VB
cord-022053-idft1p6d	207	54	digital	digital	JJ
cord-022053-idft1p6d	207	55	imaging	imaging	NN
cord-022053-idft1p6d	207	56	to	to	TO
cord-022053-idft1p6d	207	57	count	count	VB
cord-022053-idft1p6d	207	58	the	the	DT
cord-022053-idft1p6d	207	59	barcodes	barcode	NNS
cord-022053-idft1p6d	207	60	in	in	IN
cord-022053-idft1p6d	207	61	the	the	DT
cord-022053-idft1p6d	207	62	sample	sample	NN
cord-022053-idft1p6d	207	63	.	.	.
cord-022053-idft1p6d	208	1	The	the	DT
cord-022053-idft1p6d	208	2	current	current	JJ
cord-022053-idft1p6d	208	3	version	version	NN
cord-022053-idft1p6d	208	4	can	can	MD
cord-022053-idft1p6d	208	5	measure	measure	VB
cord-022053-idft1p6d	208	6	up	up	RP
cord-022053-idft1p6d	208	7	to	to	TO
cord-022053-idft1p6d	208	8	500	500	CD
cord-022053-idft1p6d	208	9	independent	independent	JJ
cord-022053-idft1p6d	208	10	capture	capture	NN
cord-022053-idft1p6d	208	11	:	:	:
cord-022053-idft1p6d	208	12	reporter	reporter	NN
cord-022053-idft1p6d	208	13	pairs	pair	NNS
cord-022053-idft1p6d	208	14	.	.	.
cord-022053-idft1p6d	209	1	The	the	DT
cord-022053-idft1p6d	209	2	technology	technology	NN
cord-022053-idft1p6d	209	3	can	can	MD
cord-022053-idft1p6d	209	4	be	be	VB
cord-022053-idft1p6d	209	5	applied	apply	VBN
cord-022053-idft1p6d	209	6	to	to	IN
cord-022053-idft1p6d	209	7	any	any	DT
cord-022053-idft1p6d	209	8	RNA	RNA	NNP
cord-022053-idft1p6d	209	9	target	target	NN
cord-022053-idft1p6d	209	10	(	(	-LRB-
cord-022053-idft1p6d	209	11	human	human	JJ
cord-022053-idft1p6d	209	12	or	or	CC
cord-022053-idft1p6d	209	13	microbial	microbial	JJ
cord-022053-idft1p6d	209	14	)	)	-RRB-
cord-022053-idft1p6d	209	15	,	,	,
cord-022053-idft1p6d	209	16	and	and	CC
cord-022053-idft1p6d	209	17	the	the	DT
cord-022053-idft1p6d	209	18	great	great	JJ
cord-022053-idft1p6d	209	19	advantage	advantage	NN
cord-022053-idft1p6d	209	20	in	in	IN
cord-022053-idft1p6d	209	21	infectious	infectious	JJ
cord-022053-idft1p6d	209	22	disease	disease	NN
cord-022053-idft1p6d	209	23	is	be	VBZ
cord-022053-idft1p6d	209	24	the	the	DT
cord-022053-idft1p6d	209	25	extremely	extremely	RB
cord-022053-idft1p6d	209	26	low	low	JJ
cord-022053-idft1p6d	209	27	input	input	NN
cord-022053-idft1p6d	209	28	quantities	quantity	NNS
cord-022053-idft1p6d	209	29	that	that	WDT
cord-022053-idft1p6d	209	30	can	can	MD
cord-022053-idft1p6d	209	31	be	be	VB
cord-022053-idft1p6d	209	32	detected	detect	VBN
cord-022053-idft1p6d	209	33	without	without	IN
cord-022053-idft1p6d	209	34	interference	interference	NN
cord-022053-idft1p6d	209	35	from	from	IN
cord-022053-idft1p6d	209	36	other	other	JJ
cord-022053-idft1p6d	209	37	RNA	RNA	NNP
cord-022053-idft1p6d	209	38	.	.	.
cord-022053-idft1p6d	210	1	Because	because	IN
cord-022053-idft1p6d	210	2	of	of	IN
cord-022053-idft1p6d	210	3	the	the	DT
cord-022053-idft1p6d	210	4	counting	counting	NN
cord-022053-idft1p6d	210	5	algorithm	algorithm	NN
cord-022053-idft1p6d	210	6	,	,	,
cord-022053-idft1p6d	210	7	with	with	IN
cord-022053-idft1p6d	210	8	proper	proper	JJ
cord-022053-idft1p6d	210	9	probe	probe	NN
cord-022053-idft1p6d	210	10	selection	selection	NN
cord-022053-idft1p6d	210	11	in	in	IN
cord-022053-idft1p6d	210	12	a	a	DT
cord-022053-idft1p6d	210	13	given	give	VBN
cord-022053-idft1p6d	210	14	mixture	mixture	NN
cord-022053-idft1p6d	210	15	,	,	,
cord-022053-idft1p6d	210	16	accurate	accurate	JJ
cord-022053-idft1p6d	210	17	quantification	quantification	NN
cord-022053-idft1p6d	210	18	of	of	IN
cord-022053-idft1p6d	210	19	RNA	RNA	NNP
cord-022053-idft1p6d	210	20	is	be	VBZ
cord-022053-idft1p6d	210	21	possible	possible	JJ
cord-022053-idft1p6d	210	22	without	without	IN
cord-022053-idft1p6d	210	23	amplification	amplification	NN
cord-022053-idft1p6d	210	24	.	.	.
cord-022053-idft1p6d	211	1	One	one	CD
cord-022053-idft1p6d	211	2	pitfall	pitfall	NN
cord-022053-idft1p6d	211	3	to	to	IN
cord-022053-idft1p6d	211	4	this	this	DT
cord-022053-idft1p6d	211	5	technology	technology	NN
cord-022053-idft1p6d	211	6	is	be	VBZ
cord-022053-idft1p6d	211	7	that	that	IN
cord-022053-idft1p6d	211	8	the	the	DT
cord-022053-idft1p6d	211	9	presence	presence	NN
cord-022053-idft1p6d	211	10	of	of	IN
cord-022053-idft1p6d	211	11	any	any	DT
cord-022053-idft1p6d	211	12	given	give	VBN
cord-022053-idft1p6d	211	13	target	target	NN
cord-022053-idft1p6d	211	14	in	in	IN
cord-022053-idft1p6d	211	15	a	a	DT
cord-022053-idft1p6d	211	16	disproportionate	disproportionate	JJ
cord-022053-idft1p6d	211	17	ratio	ratio	NN
cord-022053-idft1p6d	211	18	to	to	IN
cord-022053-idft1p6d	211	19	other	other	JJ
cord-022053-idft1p6d	211	20	targets	target	NNS
cord-022053-idft1p6d	211	21	will	will	MD
cord-022053-idft1p6d	211	22	flood	flood	VB
cord-022053-idft1p6d	211	23	the	the	DT
cord-022053-idft1p6d	211	24	digital	digital	JJ
cord-022053-idft1p6d	211	25	analysis	analysis	NN
cord-022053-idft1p6d	211	26	(	(	-LRB-
cord-022053-idft1p6d	211	27	i.e.	i.e.	FW
cord-022053-idft1p6d	211	28	,	,	,
cord-022053-idft1p6d	211	29	consider	consider	VB
cord-022053-idft1p6d	211	30	hemoglobin	hemoglobin	NN
cord-022053-idft1p6d	211	31	relative	relative	JJ
cord-022053-idft1p6d	211	32	to	to	IN
cord-022053-idft1p6d	211	33	cytokines	cytokine	NNS
cord-022053-idft1p6d	211	34	in	in	IN
cord-022053-idft1p6d	211	35	peripheral	peripheral	JJ
cord-022053-idft1p6d	211	36	blood	blood	NN
cord-022053-idft1p6d	211	37	)	)	-RRB-
cord-022053-idft1p6d	211	38	.	.	.
cord-022053-idft1p6d	212	1	Relative	relative	JJ
cord-022053-idft1p6d	212	2	to	to	IN
cord-022053-idft1p6d	212	3	sequencing	sequencing	NN
cord-022053-idft1p6d	212	4	,	,	,
cord-022053-idft1p6d	212	5	the	the	DT
cord-022053-idft1p6d	212	6	technology	technology	NN
cord-022053-idft1p6d	212	7	remains	remain	VBZ
cord-022053-idft1p6d	212	8	expensive	expensive	JJ
cord-022053-idft1p6d	212	9	,	,	,
cord-022053-idft1p6d	212	10	but	but	CC
cord-022053-idft1p6d	212	11	the	the	DT
cord-022053-idft1p6d	212	12	benefit	benefit	NN
cord-022053-idft1p6d	212	13	of	of	IN
cord-022053-idft1p6d	212	14	quantification	quantification	NN
cord-022053-idft1p6d	212	15	of	of	IN
cord-022053-idft1p6d	212	16	extremely	extremely	RB
cord-022053-idft1p6d	212	17	limited	limited	JJ
cord-022053-idft1p6d	212	18	sample	sample	NN
cord-022053-idft1p6d	212	19	with	with	IN
cord-022053-idft1p6d	212	20	minimal	minimal	JJ
cord-022053-idft1p6d	212	21	processing	processing	NN
cord-022053-idft1p6d	212	22	makes	make	VBZ
cord-022053-idft1p6d	212	23	this	this	DT
cord-022053-idft1p6d	212	24	an	an	DT
cord-022053-idft1p6d	212	25	attractive	attractive	JJ
cord-022053-idft1p6d	212	26	target	target	NN
cord-022053-idft1p6d	212	27	for	for	IN
cord-022053-idft1p6d	212	28	future	future	JJ
cord-022053-idft1p6d	212	29	test	test	NN
cord-022053-idft1p6d	212	30	development	development	NN
cord-022053-idft1p6d	212	31	.	.	.
cord-022053-idft1p6d	213	1	For	for	IN
cord-022053-idft1p6d	213	2	microorganisms	microorganism	NNS
cord-022053-idft1p6d	213	3	,	,	,
cord-022053-idft1p6d	213	4	broad	broad	JJ
cord-022053-idft1p6d	213	5	panels	panel	NNS
cord-022053-idft1p6d	213	6	using	use	VBG
cord-022053-idft1p6d	213	7	signature	signature	NN
cord-022053-idft1p6d	213	8	genes	gene	NNS
cord-022053-idft1p6d	214	1	and/or	and/or	CC
cord-022053-idft1p6d	214	2	focused	focused	JJ
cord-022053-idft1p6d	214	3	panels	panel	NNS
cord-022053-idft1p6d	214	4	using	use	VBG
cord-022053-idft1p6d	214	5	genes	gene	NNS
cord-022053-idft1p6d	214	6	in	in	IN
cord-022053-idft1p6d	214	7	antibiotic	antibiotic	JJ
cord-022053-idft1p6d	214	8	metabolism	metabolism	NN
cord-022053-idft1p6d	214	9	pathways	pathway	NNS
cord-022053-idft1p6d	214	10	can	can	MD
cord-022053-idft1p6d	214	11	be	be	VB
cord-022053-idft1p6d	214	12	created	create	VBN
cord-022053-idft1p6d	214	13	.	.	.
cord-022053-idft1p6d	215	1	Studies	study	NNS
cord-022053-idft1p6d	215	2	in	in	IN
cord-022053-idft1p6d	215	3	a	a	DT
cord-022053-idft1p6d	215	4	range	range	NN
cord-022053-idft1p6d	215	5	of	of	IN
cord-022053-idft1p6d	215	6	diseases	disease	NNS
cord-022053-idft1p6d	215	7	have	have	VBP
cord-022053-idft1p6d	215	8	shown	show	VBN
cord-022053-idft1p6d	215	9	that	that	IN
cord-022053-idft1p6d	215	10	RNA	RNA	NNP
cord-022053-idft1p6d	215	11	from	from	IN
cord-022053-idft1p6d	215	12	any	any	DT
cord-022053-idft1p6d	215	13	source	source	NN
cord-022053-idft1p6d	215	14	,	,	,
cord-022053-idft1p6d	215	15	including	include	VBG
cord-022053-idft1p6d	215	16	FFPE	FFPE	NNP
cord-022053-idft1p6d	215	17	,	,	,
cord-022053-idft1p6d	215	18	is	be	VBZ
cord-022053-idft1p6d	215	19	sufficient	sufficient	JJ
cord-022053-idft1p6d	215	20	for	for	IN
cord-022053-idft1p6d	215	21	NanoString	NanoString	NNP
cord-022053-idft1p6d	215	22	analysis	analysis	NN
cord-022053-idft1p6d	215	23	,	,	,
cord-022053-idft1p6d	215	24	[	[	-LRB-
cord-022053-idft1p6d	215	25	56	56	CD
cord-022053-idft1p6d	215	26	]	]	-RRB-
cord-022053-idft1p6d	215	27	[	[	-LRB-
cord-022053-idft1p6d	215	28	57	57	CD
cord-022053-idft1p6d	215	29	]	]	-RRB-
cord-022053-idft1p6d	215	30	[	[	-LRB-
cord-022053-idft1p6d	215	31	58	58	CD
cord-022053-idft1p6d	215	32	]	]	-RRB-
cord-022053-idft1p6d	216	1	In	in	IN
cord-022053-idft1p6d	216	2	one	one	CD
cord-022053-idft1p6d	216	3	study	study	NN
cord-022053-idft1p6d	216	4	,	,	,
cord-022053-idft1p6d	216	5	quantitative	quantitative	JJ
cord-022053-idft1p6d	216	6	expression	expression	NN
cord-022053-idft1p6d	216	7	of	of	IN
cord-022053-idft1p6d	216	8	Plasmodium	Plasmodium	NNP
cord-022053-idft1p6d	216	9	falciparum	falciparum	NN
cord-022053-idft1p6d	216	10	schizonts	schizont	NNS
cord-022053-idft1p6d	216	11	from	from	IN
cord-022053-idft1p6d	216	12	human	human	JJ
cord-022053-idft1p6d	216	13	tissue	tissue	NN
cord-022053-idft1p6d	216	14	(	(	-LRB-
cord-022053-idft1p6d	216	15	both	both	DT
cord-022053-idft1p6d	216	16	frozen	frozen	JJ
cord-022053-idft1p6d	216	17	and	and	CC
cord-022053-idft1p6d	216	18	FFPE	FFPE	NNP
cord-022053-idft1p6d	216	19	)	)	-RRB-
cord-022053-idft1p6d	216	20	were	be	VBD
cord-022053-idft1p6d	216	21	measured	measure	VBN
cord-022053-idft1p6d	216	22	and	and	CC
cord-022053-idft1p6d	216	23	,	,	,
cord-022053-idft1p6d	216	24	using	use	VBG
cord-022053-idft1p6d	216	25	imputation	imputation	NN
cord-022053-idft1p6d	216	26	,	,	,
cord-022053-idft1p6d	216	27	the	the	DT
cord-022053-idft1p6d	216	28	entire	entire	JJ
cord-022053-idft1p6d	216	29	expression	expression	NN
cord-022053-idft1p6d	216	30	profile	profile	NN
cord-022053-idft1p6d	216	31	for	for	IN
cord-022053-idft1p6d	216	32	the	the	DT
cord-022053-idft1p6d	216	33	organisms	organism	NNS
cord-022053-idft1p6d	216	34	determined	determine	VBN
cord-022053-idft1p6d	216	35	.	.	.
cord-022053-idft1p6d	217	1	59	59	CD
cord-022053-idft1p6d	217	2	pathogens	pathogen	NNS
cord-022053-idft1p6d	217	3	include	include	VBP
cord-022053-idft1p6d	217	4	E.	E.	NNP
cord-022053-idft1p6d	217	5	coli	coli	NNS
cord-022053-idft1p6d	217	6	and	and	CC
cord-022053-idft1p6d	217	7	Shigella	Shigella	NNP
cord-022053-idft1p6d	217	8	,	,	,
cord-022053-idft1p6d	217	9	Salmonella	Salmonella	NNP
cord-022053-idft1p6d	217	10	,	,	,
cord-022053-idft1p6d	217	11	Campylobacter	Campylobacter	NNP
cord-022053-idft1p6d	217	12	,	,	,
cord-022053-idft1p6d	217	13	and	and	CC
cord-022053-idft1p6d	217	14	Clostridium	clostridium	NN
cord-022053-idft1p6d	217	15	perfringens	perfringen	NNS
cord-022053-idft1p6d	217	16	.	.	.
cord-022053-idft1p6d	218	1	Typical	typical	JJ
cord-022053-idft1p6d	218	2	viral	viral	JJ
cord-022053-idft1p6d	218	3	pathogens	pathogen	NNS
cord-022053-idft1p6d	218	4	included	include	VBN
cord-022053-idft1p6d	218	5	in	in	IN
cord-022053-idft1p6d	218	6	these	these	DT
cord-022053-idft1p6d	218	7	panels	panel	NNS
cord-022053-idft1p6d	218	8	are	be	VBP
cord-022053-idft1p6d	218	9	adenovirus	adenovirus	NN
cord-022053-idft1p6d	218	10	,	,	,
cord-022053-idft1p6d	218	11	norovirus	norovirus	NN
cord-022053-idft1p6d	218	12	,	,	,
cord-022053-idft1p6d	218	13	and	and	CC
cord-022053-idft1p6d	218	14	rotavirus	rotavirus	NN
cord-022053-idft1p6d	218	15	,	,	,
cord-022053-idft1p6d	218	16	representing	represent	VBG
cord-022053-idft1p6d	218	17	the	the	DT
cord-022053-idft1p6d	218	18	three	three	CD
cord-022053-idft1p6d	218	19	most	most	RBS
cord-022053-idft1p6d	218	20	common	common	JJ
cord-022053-idft1p6d	218	21	symptomatic	symptomatic	JJ
cord-022053-idft1p6d	218	22	viral	viral	JJ
cord-022053-idft1p6d	218	23	diarrheas	diarrhea	NNS
cord-022053-idft1p6d	218	24	.	.	.
cord-022053-idft1p6d	219	1	Diagnosis	diagnosis	NN
cord-022053-idft1p6d	219	2	is	be	VBZ
cord-022053-idft1p6d	219	3	moving	move	VBG
cord-022053-idft1p6d	219	4	more	more	JJR
cord-022053-idft1p6d	219	5	and	and	CC
cord-022053-idft1p6d	219	6	more	more	RBR
cord-022053-idft1p6d	219	7	towards	towards	IN
cord-022053-idft1p6d	219	8	multiplex	multiplex	JJ
cord-022053-idft1p6d	219	9	panels	panel	NNS
cord-022053-idft1p6d	219	10	that	that	WDT
cord-022053-idft1p6d	219	11	cover	cover	VBP
cord-022053-idft1p6d	219	12	major	major	JJ
cord-022053-idft1p6d	219	13	bacterial	bacterial	JJ
cord-022053-idft1p6d	219	14	pathogens	pathogen	NNS
cord-022053-idft1p6d	219	15	,	,	,
cord-022053-idft1p6d	219	16	as	as	RB
cord-022053-idft1p6d	219	17	well	well	RB
cord-022053-idft1p6d	219	18	as	as	IN
cord-022053-idft1p6d	219	19	some	some	DT
cord-022053-idft1p6d	219	20	parasitic	parasitic	JJ
cord-022053-idft1p6d	219	21	and	and	CC
cord-022053-idft1p6d	219	22	viral	viral	JJ
cord-022053-idft1p6d	219	23	agents	agent	NNS
cord-022053-idft1p6d	219	24	.	.	.
cord-022053-idft1p6d	220	1	[	[	-LRB-
cord-022053-idft1p6d	220	2	84	84	CD
cord-022053-idft1p6d	220	3	]	]	-RRB-
cord-022053-idft1p6d	220	4	[	[	-LRB-
cord-022053-idft1p6d	220	5	85	85	CD
cord-022053-idft1p6d	220	6	]	]	-RRB-
cord-022053-idft1p6d	220	7	[	[	-LRB-
cord-022053-idft1p6d	220	8	86	86	CD
cord-022053-idft1p6d	220	9	]	]	-RRB-
cord-022053-idft1p6d	221	1	In	in	IN
cord-022053-idft1p6d	221	2	addition	addition	NN
cord-022053-idft1p6d	221	3	to	to	IN
cord-022053-idft1p6d	221	4	standard	standard	JJ
cord-022053-idft1p6d	221	5	agents	agent	NNS
cord-022053-idft1p6d	221	6	of	of	IN
cord-022053-idft1p6d	221	7	infectious	infectious	JJ
cord-022053-idft1p6d	221	8	diarrhea	diarrhea	NN
cord-022053-idft1p6d	221	9	,	,	,
cord-022053-idft1p6d	221	10	there	there	EX
cord-022053-idft1p6d	221	11	are	be	VBP
cord-022053-idft1p6d	221	12	special	special	JJ
cord-022053-idft1p6d	221	13	considerations	consideration	NNS
cord-022053-idft1p6d	221	14	when	when	WRB
cord-022053-idft1p6d	221	15	testing	test	VBG
cord-022053-idft1p6d	221	16	for	for	IN
cord-022053-idft1p6d	221	17	disease	disease	NN
cord-022053-idft1p6d	221	18	caused	cause	VBN
cord-022053-idft1p6d	221	19	by	by	IN
cord-022053-idft1p6d	221	20	C.	C.	NNP
cord-022053-idft1p6d	221	21	difficile	difficile	NNP
cord-022053-idft1p6d	221	22	.	.	.
cord-022053-idft1p6d	222	1	These	these	DT
cord-022053-idft1p6d	222	2	panels	panel	NNS
cord-022053-idft1p6d	222	3	are	be	VBP
cord-022053-idft1p6d	222	4	,	,	,
cord-022053-idft1p6d	222	5	again	again	RB
cord-022053-idft1p6d	222	6	,	,	,
cord-022053-idft1p6d	222	7	extremely	extremely	RB
cord-022053-idft1p6d	222	8	valuable	valuable	JJ
cord-022053-idft1p6d	222	9	because	because	IN
cord-022053-idft1p6d	222	10	the	the	DT
cord-022053-idft1p6d	222	11	tools	tool	NNS
cord-022053-idft1p6d	222	12	to	to	TO
cord-022053-idft1p6d	222	13	diagnose	diagnose	VB
cord-022053-idft1p6d	222	14	these	these	DT
cord-022053-idft1p6d	222	15	disease	disease	NN
cord-022053-idft1p6d	222	16	in	in	IN
cord-022053-idft1p6d	222	17	anatomic	anatomic	JJ
cord-022053-idft1p6d	222	18	pathology	pathology	NN
cord-022053-idft1p6d	222	19	are	be	VBP
cord-022053-idft1p6d	222	20	often	often	RB
cord-022053-idft1p6d	222	21	very	very	RB
cord-022053-idft1p6d	222	22	limited	limited	JJ
cord-022053-idft1p6d	222	23	and	and	CC
cord-022053-idft1p6d	222	24	too	too	RB
cord-022053-idft1p6d	222	25	invasive	invasive	JJ
cord-022053-idft1p6d	222	26	for	for	IN
cord-022053-idft1p6d	222	27	most	most	JJS
cord-022053-idft1p6d	222	28	patient	patient	JJ
cord-022053-idft1p6d	222	29	situations	situation	NNS
cord-022053-idft1p6d	222	30	.	.	.
cord-022053-idft1p6d	223	1	Parasitic	parasitic	JJ
cord-022053-idft1p6d	223	2	enteric	enteric	JJ
cord-022053-idft1p6d	223	3	infections	infection	NNS
cord-022053-idft1p6d	223	4	represent	represent	VBP
cord-022053-idft1p6d	223	5	a	a	DT
cord-022053-idft1p6d	223	6	major	major	JJ
cord-022053-idft1p6d	223	7	challenge	challenge	NN
cord-022053-idft1p6d	223	8	in	in	IN
cord-022053-idft1p6d	223	9	developing	develop	VBG
cord-022053-idft1p6d	223	10	countries	country	NNS
cord-022053-idft1p6d	223	11	but	but	CC
cord-022053-idft1p6d	223	12	remain	remain	VBP
cord-022053-idft1p6d	223	13	rare	rare	JJ
cord-022053-idft1p6d	223	14	in	in	IN
cord-022053-idft1p6d	223	15	countries	country	NNS
cord-022053-idft1p6d	223	16	in	in	IN
cord-022053-idft1p6d	223	17	which	which	WDT
cord-022053-idft1p6d	223	18	most	most	JJS
cord-022053-idft1p6d	223	19	new	new	JJ
cord-022053-idft1p6d	223	20	technologies	technology	NNS
cord-022053-idft1p6d	223	21	are	be	VBP
cord-022053-idft1p6d	223	22	being	be	VBG
cord-022053-idft1p6d	223	23	developed	develop	VBN
cord-022053-idft1p6d	223	24	.	.	.
cord-022053-idft1p6d	224	1	Despite	despite	IN
cord-022053-idft1p6d	224	2	this	this	DT
cord-022053-idft1p6d	224	3	disparate	disparate	JJ
cord-022053-idft1p6d	224	4	situation	situation	NN
cord-022053-idft1p6d	224	5	,	,	,
cord-022053-idft1p6d	224	6	efforts	effort	NNS
cord-022053-idft1p6d	224	7	have	have	VBP
cord-022053-idft1p6d	224	8	been	be	VBN
cord-022053-idft1p6d	224	9	made	make	VBN
cord-022053-idft1p6d	224	10	to	to	TO
cord-022053-idft1p6d	224	11	approach	approach	VB
cord-022053-idft1p6d	224	12	parasitic	parasitic	JJ
cord-022053-idft1p6d	224	13	infections	infection	NNS
cord-022053-idft1p6d	224	14	,	,	,
cord-022053-idft1p6d	224	15	and	and	CC
cord-022053-idft1p6d	224	16	thus	thus	RB
cord-022053-idft1p6d	224	17	the	the	DT
cord-022053-idft1p6d	224	18	inherent	inherent	JJ
cord-022053-idft1p6d	224	19	challenges	challenge	NNS
cord-022053-idft1p6d	224	20	have	have	VBP
cord-022053-idft1p6d	224	21	become	become	VBN
cord-022053-idft1p6d	224	22	apparent	apparent	JJ
cord-022053-idft1p6d	224	23	.	.	.
cord-022053-idft1p6d	225	1	Extraction	extraction	NN
cord-022053-idft1p6d	225	2	from	from	IN
cord-022053-idft1p6d	225	3	stool	stool	NN
cord-022053-idft1p6d	225	4	for	for	IN
cord-022053-idft1p6d	225	5	suspected	suspect	VBN
cord-022053-idft1p6d	225	6	parasite	parasite	NN
cord-022053-idft1p6d	225	7	infections	infection	NNS
cord-022053-idft1p6d	225	8	requires	require	VBZ
cord-022053-idft1p6d	225	9	that	that	IN
cord-022053-idft1p6d	225	10	protists	protist	NNS
cord-022053-idft1p6d	225	11	(	(	-LRB-
cord-022053-idft1p6d	225	12	ciliates	ciliate	NNS
cord-022053-idft1p6d	225	13	,	,	,
cord-022053-idft1p6d	225	14	ameoba	ameoba	NN
cord-022053-idft1p6d	225	15	,	,	,
cord-022053-idft1p6d	225	16	flagellates	flagellate	NNS
cord-022053-idft1p6d	225	17	,	,	,
cord-022053-idft1p6d	225	18	coccidia	coccidia	NN
cord-022053-idft1p6d	225	19	)	)	-RRB-
cord-022053-idft1p6d	225	20	,	,	,
cord-022053-idft1p6d	225	21	helminth	helminth	JJ
cord-022053-idft1p6d	225	22	larvae	larva	NNS
cord-022053-idft1p6d	225	23	(	(	-LRB-
cord-022053-idft1p6d	225	24	nematodes	nematode	NNS
cord-022053-idft1p6d	225	25	)	)	-RRB-
cord-022053-idft1p6d	225	26	,	,	,
cord-022053-idft1p6d	225	27	and	and	CC
cord-022053-idft1p6d	225	28	helminth	helminth	JJ
cord-022053-idft1p6d	225	29	eggs	egg	NNS
cord-022053-idft1p6d	225	30	(	(	-LRB-
cord-022053-idft1p6d	225	31	nematode	nematode	NN
cord-022053-idft1p6d	225	32	,	,	,
cord-022053-idft1p6d	225	33	trematode	trematode	NN
cord-022053-idft1p6d	225	34	,	,	,
cord-022053-idft1p6d	225	35	and	and	CC
cord-022053-idft1p6d	225	36	cestode	cestode	NNP
cord-022053-idft1p6d	225	37	)	)	-RRB-
cord-022053-idft1p6d	225	38	be	be	VB
cord-022053-idft1p6d	225	39	lysed	lyse	VBN
cord-022053-idft1p6d	225	40	sufficiently	sufficiently	RB
cord-022053-idft1p6d	225	41	to	to	TO
cord-022053-idft1p6d	225	42	release	release	VB
cord-022053-idft1p6d	225	43	DNA	dna	NN
cord-022053-idft1p6d	225	44	efficiently	efficiently	RB
cord-022053-idft1p6d	225	45	.	.	.
cord-022053-idft1p6d	226	1	This	this	DT
cord-022053-idft1p6d	226	2	challenge	challenge	NN
cord-022053-idft1p6d	226	3	has	have	VBZ
cord-022053-idft1p6d	226	4	led	lead	VBN
cord-022053-idft1p6d	226	5	to	to	IN
cord-022053-idft1p6d	226	6	eight	eight	CD
cord-022053-idft1p6d	226	7	or	or	CC
cord-022053-idft1p6d	226	8	more	more	JJR
cord-022053-idft1p6d	226	9	different	different	JJ
cord-022053-idft1p6d	226	10	extraction	extraction	NN
cord-022053-idft1p6d	226	11	protocols	protocol	NNS
cord-022053-idft1p6d	226	12	with	with	IN
cord-022053-idft1p6d	226	13	a	a	DT
cord-022053-idft1p6d	226	14	range	range	NN
cord-022053-idft1p6d	226	15	of	of	IN
cord-022053-idft1p6d	226	16	preparation	preparation	NN
cord-022053-idft1p6d	226	17	requirements	requirement	NNS
cord-022053-idft1p6d	226	18	,	,	,
cord-022053-idft1p6d	226	19	including	include	VBG
cord-022053-idft1p6d	226	20	spin	spin	NN
cord-022053-idft1p6d	226	21	columns	column	NNS
cord-022053-idft1p6d	226	22	,	,	,
cord-022053-idft1p6d	226	23	automated	automate	VBN
cord-022053-idft1p6d	226	24	magnetic	magnetic	JJ
cord-022053-idft1p6d	226	25	bead	bead	NN
cord-022053-idft1p6d	226	26	assays	assay	NNS
cord-022053-idft1p6d	226	27	,	,	,
cord-022053-idft1p6d	226	28	and	and	CC
cord-022053-idft1p6d	226	29	"	"	``
cord-022053-idft1p6d	226	30	bead	bead	NN
cord-022053-idft1p6d	226	31	beating	beat	VBG
cord-022053-idft1p6d	226	32	"	"	''
cord-022053-idft1p6d	226	33	methods	method	NNS
cord-022053-idft1p6d	226	34	.	.	.
cord-022053-idft1p6d	227	1	Molecular	molecular	JJ
cord-022053-idft1p6d	227	2	targets	target	NNS
cord-022053-idft1p6d	227	3	for	for	IN
cord-022053-idft1p6d	227	4	subsequent	subsequent	JJ
cord-022053-idft1p6d	227	5	detection	detection	NN
cord-022053-idft1p6d	227	6	assays	assay	NNS
cord-022053-idft1p6d	227	7	as	as	IN
cord-022053-idft1p6d	227	8	specific	specific	JJ
cord-022053-idft1p6d	227	9	single	single	JJ
cord-022053-idft1p6d	227	10	targets	target	NNS
cord-022053-idft1p6d	227	11	across	across	IN
cord-022053-idft1p6d	227	12	this	this	DT
cord-022053-idft1p6d	227	13	range	range	NN
cord-022053-idft1p6d	227	14	of	of	IN
cord-022053-idft1p6d	227	15	organisms	organism	NNS
cord-022053-idft1p6d	227	16	has	have	VBZ
cord-022053-idft1p6d	227	17	included	include	VBN
cord-022053-idft1p6d	227	18	18S	18S	NNP
cord-022053-idft1p6d	227	19	rDNA	rDNA	NNP
cord-022053-idft1p6d	227	20	,	,	,
cord-022053-idft1p6d	227	21	ITS	ITS	NNP
cord-022053-idft1p6d	227	22	,	,	,
cord-022053-idft1p6d	227	23	COX	COX	NNP
cord-022053-idft1p6d	227	24	1	1	CD
cord-022053-idft1p6d	227	25	,	,	,
cord-022053-idft1p6d	227	26	pOV-46	pov-46	NN
cord-022053-idft1p6d	227	27	,	,	,
cord-022053-idft1p6d	227	28	5.8S	5.8s	NN
cord-022053-idft1p6d	227	29	rDNA	rdna	NN
cord-022053-idft1p6d	227	30	,	,	,
cord-022053-idft1p6d	227	31	Segment	Segment	NNP
cord-022053-idft1p6d	227	32	A	A	NNP
cord-022053-idft1p6d	227	33	,	,	,
cord-022053-idft1p6d	227	34	COWP	COWP	NNP
cord-022053-idft1p6d	227	35	,	,	,
cord-022053-idft1p6d	227	36	actin	actin	NN
cord-022053-idft1p6d	227	37	,	,	,
cord-022053-idft1p6d	227	38	HDP2	HDP2	NNPS
cord-022053-idft1p6d	227	39	,	,	,
cord-022053-idft1p6d	227	40	DL1	DL1	NNP
cord-022053-idft1p6d	227	41	,	,	,
cord-022053-idft1p6d	227	42	and	and	CC
cord-022053-idft1p6d	227	43	28S	28S	NNP
cord-022053-idft1p6d	227	44	rDNA	rDNA	NNP
cord-022053-idft1p6d	227	45	.	.	.
cord-022053-idft1p6d	227	46	87	87	CD
cord-022053-idft1p6d	228	1	In	in	IN
cord-022053-idft1p6d	228	2	commercially	commercially	RB
cord-022053-idft1p6d	228	3	available	available	JJ
cord-022053-idft1p6d	228	4	,	,	,
cord-022053-idft1p6d	228	5	multiplex	multiplex	JJ
cord-022053-idft1p6d	228	6	PCR	pcr	NN
cord-022053-idft1p6d	228	7	assays	assay	NNS
cord-022053-idft1p6d	228	8	,	,	,
cord-022053-idft1p6d	228	9	the	the	DT
cord-022053-idft1p6d	228	10	majority	majority	NN
cord-022053-idft1p6d	228	11	of	of	IN
cord-022053-idft1p6d	228	12	the	the	DT
cord-022053-idft1p6d	228	13	platforms	platform	NNS
cord-022053-idft1p6d	228	14	target	target	VB
cord-022053-idft1p6d	228	15	only	only	RB
cord-022053-idft1p6d	228	16	Cryptosporidium	cryptosporidium	NN
cord-022053-idft1p6d	228	17	,	,	,
cord-022053-idft1p6d	228	18	Giardia	Giardia	NNP
cord-022053-idft1p6d	228	19	,	,	,
cord-022053-idft1p6d	228	20	Entamoeba	Entamoeba	NNP
cord-022053-idft1p6d	228	21	histolytica	histolytica	NNP
cord-022053-idft1p6d	228	22	,	,	,
cord-022053-idft1p6d	228	23	and	and	CC
cord-022053-idft1p6d	228	24	,	,	,
cord-022053-idft1p6d	228	25	rarely	rarely	RB
cord-022053-idft1p6d	228	26	,	,	,
cord-022053-idft1p6d	228	27	Cyclospora	Cyclospora	NNP
cord-022053-idft1p6d	228	28	.	.	.
cord-022053-idft1p6d	229	1	Because	because	IN
cord-022053-idft1p6d	229	2	these	these	DT
cord-022053-idft1p6d	229	3	first	first	JJ
cord-022053-idft1p6d	229	4	three	three	CD
cord-022053-idft1p6d	229	5	represent	represent	VBP
cord-022053-idft1p6d	229	6	80	80	CD
cord-022053-idft1p6d	229	7	%	%	NN
cord-022053-idft1p6d	229	8	to	to	TO
cord-022053-idft1p6d	229	9	99	99	CD
cord-022053-idft1p6d	229	10	%	%	NN
cord-022053-idft1p6d	229	11	of	of	IN
cord-022053-idft1p6d	229	12	parasites	parasite	NNS
cord-022053-idft1p6d	229	13	isolated	isolate	VBN
cord-022053-idft1p6d	229	14	by	by	IN
cord-022053-idft1p6d	229	15	all	all	DT
cord-022053-idft1p6d	229	16	methods	method	NNS
cord-022053-idft1p6d	229	17	from	from	IN
cord-022053-idft1p6d	229	18	stool	stool	NN
cord-022053-idft1p6d	229	19	in	in	IN
cord-022053-idft1p6d	229	20	developed	develop	VBN
cord-022053-idft1p6d	229	21	nations	nation	NNS
cord-022053-idft1p6d	229	22	,	,	,
cord-022053-idft1p6d	229	23	additions	addition	NNS
cord-022053-idft1p6d	229	24	of	of	IN
cord-022053-idft1p6d	229	25	other	other	JJ
cord-022053-idft1p6d	229	26	much	much	RB
cord-022053-idft1p6d	229	27	less	less	JJR
cord-022053-idft1p6d	229	28	common	common	JJ
cord-022053-idft1p6d	229	29	pathogens	pathogen	NNS
cord-022053-idft1p6d	229	30	is	be	VBZ
cord-022053-idft1p6d	229	31	not	not	RB
cord-022053-idft1p6d	229	32	common	common	JJ
cord-022053-idft1p6d	229	33	.	.	.
cord-022053-idft1p6d	230	1	Inclusion	inclusion	NN
cord-022053-idft1p6d	230	2	of	of	IN
cord-022053-idft1p6d	230	3	nonpathogenic	nonpathogenic	NNP
cord-022053-idft1p6d	230	4	ameba	ameba	NNP
cord-022053-idft1p6d	230	5	is	be	VBZ
cord-022053-idft1p6d	230	6	common	common	JJ
cord-022053-idft1p6d	230	7	in	in	IN
cord-022053-idft1p6d	230	8	these	these	DT
cord-022053-idft1p6d	230	9	assays	assay	NNS
cord-022053-idft1p6d	230	10	but	but	CC
cord-022053-idft1p6d	230	11	of	of	IN
cord-022053-idft1p6d	230	12	questionable	questionable	JJ
cord-022053-idft1p6d	230	13	value	value	NN
cord-022053-idft1p6d	230	14	.	.	.
cord-022053-idft1p6d	231	1	Genitourinary	genitourinary	JJ
cord-022053-idft1p6d	231	2	samples	sample	NNS
cord-022053-idft1p6d	231	3	(	(	-LRB-
cord-022053-idft1p6d	231	4	fluid	fluid	NN
cord-022053-idft1p6d	231	5	from	from	IN
cord-022053-idft1p6d	231	6	cervical	cervical	JJ
cord-022053-idft1p6d	231	7	samples	sample	NNS
cord-022053-idft1p6d	231	8	,	,	,
cord-022053-idft1p6d	231	9	urethral	urethral	JJ
cord-022053-idft1p6d	231	10	swabs	swab	NNS
cord-022053-idft1p6d	231	11	)	)	-RRB-
cord-022053-idft1p6d	231	12	are	be	VBP
cord-022053-idft1p6d	231	13	another	another	DT
cord-022053-idft1p6d	231	14	sample	sample	NN
cord-022053-idft1p6d	231	15	that	that	WDT
cord-022053-idft1p6d	231	16	benefits	benefit	VBZ
cord-022053-idft1p6d	231	17	from	from	IN
cord-022053-idft1p6d	231	18	multiplex	multiplex	JJ
cord-022053-idft1p6d	231	19	testing	testing	NN
cord-022053-idft1p6d	231	20	as	as	IN
cord-022053-idft1p6d	231	21	public	public	JJ
cord-022053-idft1p6d	231	22	health	health	NN
cord-022053-idft1p6d	231	23	screening	screening	NN
cord-022053-idft1p6d	231	24	of	of	IN
cord-022053-idft1p6d	231	25	sexually	sexually	RB
cord-022053-idft1p6d	231	26	transmitted	transmit	VBN
cord-022053-idft1p6d	231	27	diseases	disease	NNS
cord-022053-idft1p6d	231	28	are	be	VBP
cord-022053-idft1p6d	231	29	extremely	extremely	RB
cord-022053-idft1p6d	231	30	valuable	valuable	JJ
cord-022053-idft1p6d	231	31	for	for	IN
cord-022053-idft1p6d	231	32	individual	individual	JJ
cord-022053-idft1p6d	231	33	patient	patient	NN
cord-022053-idft1p6d	231	34	diagnosis	diagnosis	NN
cord-022053-idft1p6d	231	35	,	,	,
cord-022053-idft1p6d	231	36	as	as	RB
cord-022053-idft1p6d	231	37	well	well	RB
cord-022053-idft1p6d	231	38	as	as	IN
cord-022053-idft1p6d	231	39	epidemiologic	epidemiologic	JJ
cord-022053-idft1p6d	231	40	survey	survey	NN
cord-022053-idft1p6d	231	41	,	,	,
cord-022053-idft1p6d	231	42	especially	especially	RB
cord-022053-idft1p6d	231	43	with	with	IN
cord-022053-idft1p6d	231	44	the	the	DT
cord-022053-idft1p6d	231	45	inclusion	inclusion	NN
cord-022053-idft1p6d	231	46	of	of	IN
cord-022053-idft1p6d	231	47	HIV	HIV	NNP
cord-022053-idft1p6d	231	48	.	.	.
cord-022053-idft1p6d	232	1	Neisseria	Neisseria	NNP
cord-022053-idft1p6d	232	2	gonorrhea	gonorrhea	NN
cord-022053-idft1p6d	232	3	,	,	,
cord-022053-idft1p6d	232	4	Chlamydia	Chlamydia	NNP
cord-022053-idft1p6d	232	5	trachomatis	trachomatis	NN
cord-022053-idft1p6d	232	6	,	,	,
cord-022053-idft1p6d	232	7	and	and	CC
cord-022053-idft1p6d	232	8	HPV	hpv	NN
cord-022053-idft1p6d	232	9	in	in	IN
cord-022053-idft1p6d	232	10	the	the	DT
cord-022053-idft1p6d	232	11	Hologic	Hologic	NNP
cord-022053-idft1p6d	232	12	Panther	Panther	NNP
cord-022053-idft1p6d	232	13	system	system	NN
cord-022053-idft1p6d	232	14	can	can	MD
cord-022053-idft1p6d	232	15	be	be	VB
cord-022053-idft1p6d	232	16	performed	perform	VBN
cord-022053-idft1p6d	232	17	on	on	IN
cord-022053-idft1p6d	232	18	a	a	DT
cord-022053-idft1p6d	232	19	single	single	JJ
cord-022053-idft1p6d	232	20	sample	sample	NN
cord-022053-idft1p6d	232	21	,	,	,
cord-022053-idft1p6d	232	22	and	and	CC
cord-022053-idft1p6d	232	23	this	this	DT
cord-022053-idft1p6d	232	24	system	system	NN
cord-022053-idft1p6d	232	25	also	also	RB
cord-022053-idft1p6d	232	26	can	can	MD
cord-022053-idft1p6d	232	27	test	test	VB
cord-022053-idft1p6d	232	28	for	for	IN
cord-022053-idft1p6d	232	29	Trichomonas	Trichomonas	NNP
cord-022053-idft1p6d	232	30	.	.	.
cord-022053-idft1p6d	233	1	The	the	DT
cord-022053-idft1p6d	233	2	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	233	3	from	from	IN
cord-022053-idft1p6d	233	4	BioFire	BioFire	NNP
cord-022053-idft1p6d	233	5	(	(	-LRB-
cord-022053-idft1p6d	233	6	Salt	Salt	NNP
cord-022053-idft1p6d	233	7	Lake	Lake	NNP
cord-022053-idft1p6d	233	8	City	City	NNP
cord-022053-idft1p6d	233	9	,	,	,
cord-022053-idft1p6d	233	10	Utah	Utah	NNP
cord-022053-idft1p6d	233	11	)	)	-RRB-
cord-022053-idft1p6d	233	12	detects	detect	VBZ
cord-022053-idft1p6d	233	13	Chlamydia	Chlamydia	NNP
cord-022053-idft1p6d	233	14	,	,	,
cord-022053-idft1p6d	233	15	Neisseria	Neisseria	NNP
cord-022053-idft1p6d	233	16	,	,	,
cord-022053-idft1p6d	233	17	syphilis	syphili	NNS
cord-022053-idft1p6d	233	18	,	,	,
cord-022053-idft1p6d	233	19	Trichomonas	Trichomonas	NNP
cord-022053-idft1p6d	233	20	,	,	,
cord-022053-idft1p6d	233	21	Mycoplasma	Mycoplasma	NNP
cord-022053-idft1p6d	233	22	/	/	SYM
cord-022053-idft1p6d	233	23	Ureaplasma	Ureaplasma	NNP
cord-022053-idft1p6d	233	24	,	,	,
cord-022053-idft1p6d	233	25	herpes	herpes	NN
cord-022053-idft1p6d	233	26	simplex	simplex	NN
cord-022053-idft1p6d	233	27	,	,	,
cord-022053-idft1p6d	233	28	and	and	CC
cord-022053-idft1p6d	233	29	chancroid	chancroid	NN
cord-022053-idft1p6d	233	30	in	in	IN
cord-022053-idft1p6d	233	31	a	a	DT
cord-022053-idft1p6d	233	32	single	single	JJ
cord-022053-idft1p6d	233	33	sample	sample	NN
cord-022053-idft1p6d	233	34	.	.	.
cord-022053-idft1p6d	234	1	88	88	CD
cord-022053-idft1p6d	235	1	Although	although	IN
cord-022053-idft1p6d	235	2	relatively	relatively	RB
cord-022053-idft1p6d	235	3	uncommon	uncommon	JJ
cord-022053-idft1p6d	235	4	,	,	,
cord-022053-idft1p6d	235	5	meningitis	meningitis	NN
cord-022053-idft1p6d	235	6	and	and	CC
cord-022053-idft1p6d	235	7	encephalitis	encephalitis	JJ
cord-022053-idft1p6d	235	8	(	(	-LRB-
cord-022053-idft1p6d	235	9	both	both	DT
cord-022053-idft1p6d	235	10	nosocomial	nosocomial	JJ
cord-022053-idft1p6d	235	11	and	and	CC
cord-022053-idft1p6d	235	12	community	community	NN
cord-022053-idft1p6d	235	13	-	-	HYPH
cord-022053-idft1p6d	235	14	acquired	acquire	VBN
cord-022053-idft1p6d	235	15	)	)	-RRB-
cord-022053-idft1p6d	235	16	carry	carry	VB
cord-022053-idft1p6d	235	17	high	high	JJ
cord-022053-idft1p6d	235	18	morbidity	morbidity	NN
cord-022053-idft1p6d	235	19	and	and	CC
cord-022053-idft1p6d	235	20	mortality	mortality	NN
cord-022053-idft1p6d	235	21	.	.	.
cord-022053-idft1p6d	236	1	[	[	-LRB-
cord-022053-idft1p6d	236	2	89	89	CD
cord-022053-idft1p6d	236	3	]	]	-RRB-
cord-022053-idft1p6d	236	4	[	[	-LRB-
cord-022053-idft1p6d	236	5	90	90	CD
cord-022053-idft1p6d	236	6	]	]	-RRB-
cord-022053-idft1p6d	237	1	[	[	-LRB-
cord-022053-idft1p6d	237	2	91	91	CD
cord-022053-idft1p6d	237	3	]	]	-RRB-
cord-022053-idft1p6d	238	1	Time	time	NN
cord-022053-idft1p6d	238	2	is	be	VBZ
cord-022053-idft1p6d	238	3	of	of	IN
cord-022053-idft1p6d	238	4	the	the	DT
cord-022053-idft1p6d	238	5	essence	essence	NN
cord-022053-idft1p6d	238	6	when	when	WRB
cord-022053-idft1p6d	238	7	diagnosing	diagnose	VBG
cord-022053-idft1p6d	238	8	a	a	DT
cord-022053-idft1p6d	238	9	causative	causative	JJ
cord-022053-idft1p6d	238	10	agent	agent	NN
cord-022053-idft1p6d	238	11	,	,	,
cord-022053-idft1p6d	238	12	particularly	particularly	RB
cord-022053-idft1p6d	238	13	when	when	WRB
cord-022053-idft1p6d	238	14	trying	try	VBG
cord-022053-idft1p6d	238	15	to	to	TO
cord-022053-idft1p6d	238	16	determine	determine	VB
cord-022053-idft1p6d	238	17	whether	whether	IN
cord-022053-idft1p6d	238	18	it	-PRON-	PRP
cord-022053-idft1p6d	238	19	is	be	VBZ
cord-022053-idft1p6d	238	20	a	a	DT
cord-022053-idft1p6d	238	21	bacterial	bacterial	JJ
cord-022053-idft1p6d	238	22	pathogen	pathogen	NN
cord-022053-idft1p6d	238	23	that	that	WDT
cord-022053-idft1p6d	238	24	needs	need	VBZ
cord-022053-idft1p6d	238	25	immediate	immediate	JJ
cord-022053-idft1p6d	238	26	antibiotic	antibiotic	JJ
cord-022053-idft1p6d	238	27	coverage	coverage	NN
cord-022053-idft1p6d	238	28	along	along	IN
cord-022053-idft1p6d	238	29	with	with	IN
cord-022053-idft1p6d	238	30	herpes	herpes	NNP
cord-022053-idft1p6d	238	31	simplex	simplex	NNP
cord-022053-idft1p6d	238	32	,	,	,
cord-022053-idft1p6d	238	33	which	which	WDT
cord-022053-idft1p6d	238	34	needs	need	VBZ
cord-022053-idft1p6d	238	35	immediate	immediate	JJ
cord-022053-idft1p6d	238	36	antivirals	antiviral	NNS
cord-022053-idft1p6d	238	37	.	.	.
cord-022053-idft1p6d	239	1	Common	common	JJ
cord-022053-idft1p6d	239	2	bacterial	bacterial	JJ
cord-022053-idft1p6d	239	3	pathogens	pathogen	NNS
cord-022053-idft1p6d	239	4	include	include	VBP
cord-022053-idft1p6d	239	5	S.	S.	NNP
cord-022053-idft1p6d	239	6	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	239	7	,	,	,
cord-022053-idft1p6d	239	8	Streptococcus	Streptococcus	NNP
cord-022053-idft1p6d	239	9	agalactiae	agalactiae	NN
cord-022053-idft1p6d	239	10	,	,	,
cord-022053-idft1p6d	239	11	Neisseria	Neisseria	NNP
cord-022053-idft1p6d	239	12	meningitidis	meningitidis	NN
cord-022053-idft1p6d	239	13	,	,	,
cord-022053-idft1p6d	239	14	Haemophilus	haemophilus	JJ
cord-022053-idft1p6d	239	15	influenzae	influenzae	NN
cord-022053-idft1p6d	239	16	,	,	,
cord-022053-idft1p6d	239	17	and	and	CC
cord-022053-idft1p6d	239	18	Listeria	Listeria	NNP
cord-022053-idft1p6d	239	19	monocytogenes	monocytogene	NNS
cord-022053-idft1p6d	239	20	,	,	,
cord-022053-idft1p6d	239	21	although	although	IN
cord-022053-idft1p6d	239	22	there	there	EX
cord-022053-idft1p6d	239	23	are	be	VBP
cord-022053-idft1p6d	239	24	also	also	RB
cord-022053-idft1p6d	239	25	several	several	JJ
cord-022053-idft1p6d	239	26	other	other	JJ
cord-022053-idft1p6d	239	27	,	,	,
cord-022053-idft1p6d	239	28	less	less	RBR
cord-022053-idft1p6d	239	29	frequently	frequently	RB
cord-022053-idft1p6d	239	30	isolated	isolate	VBN
cord-022053-idft1p6d	239	31	,	,	,
cord-022053-idft1p6d	239	32	pathogens	pathogen	NNS
cord-022053-idft1p6d	239	33	.	.	.
cord-022053-idft1p6d	240	1	Viral	viral	JJ
cord-022053-idft1p6d	240	2	pathogens	pathogen	NNS
cord-022053-idft1p6d	240	3	in	in	IN
cord-022053-idft1p6d	240	4	these	these	DT
cord-022053-idft1p6d	240	5	panels	panel	NNS
cord-022053-idft1p6d	240	6	include	include	VBP
cord-022053-idft1p6d	240	7	the	the	DT
cord-022053-idft1p6d	240	8	primary	primary	JJ
cord-022053-idft1p6d	240	9	actionable	actionable	JJ
cord-022053-idft1p6d	240	10	viruses	virus	NNS
cord-022053-idft1p6d	240	11	(	(	-LRB-
cord-022053-idft1p6d	240	12	Cytomegalovirus	Cytomegalovirus	NNP
cord-022053-idft1p6d	240	13	,	,	,
cord-022053-idft1p6d	240	14	herpes	herpes	NN
cord-022053-idft1p6d	240	15	simplex	simplex	NN
cord-022053-idft1p6d	240	16	,	,	,
cord-022053-idft1p6d	240	17	varicella	varicella	NN
cord-022053-idft1p6d	240	18	zoster	zoster	NNP
cord-022053-idft1p6d	240	19	virus	virus	NN
cord-022053-idft1p6d	240	20	)	)	-RRB-
cord-022053-idft1p6d	240	21	,	,	,
cord-022053-idft1p6d	240	22	as	as	RB
cord-022053-idft1p6d	240	23	well	well	RB
cord-022053-idft1p6d	240	24	as	as	IN
cord-022053-idft1p6d	240	25	other	other	JJ
cord-022053-idft1p6d	240	26	common	common	JJ
cord-022053-idft1p6d	240	27	viruses	virus	NNS
cord-022053-idft1p6d	240	28	(	(	-LRB-
cord-022053-idft1p6d	240	29	Enterovirus	enterovirus	NN
cord-022053-idft1p6d	240	30	,	,	,
cord-022053-idft1p6d	240	31	Parechovirus	Parechovirus	NNP
cord-022053-idft1p6d	240	32	,	,	,
cord-022053-idft1p6d	240	33	and	and	CC
cord-022053-idft1p6d	240	34	human	human	JJ
cord-022053-idft1p6d	240	35	herpesvirus	herpesvirus	NN
cord-022053-idft1p6d	240	36	(	(	-LRB-
cord-022053-idft1p6d	240	37	HHV)-6	HHV)-6	NNP
cord-022053-idft1p6d	240	38	)	)	-RRB-
cord-022053-idft1p6d	240	39	.	.	.
cord-022053-idft1p6d	241	1	Platforms	platform	NNS
cord-022053-idft1p6d	241	2	also	also	RB
cord-022053-idft1p6d	241	3	may	may	MD
cord-022053-idft1p6d	241	4	include	include	VB
cord-022053-idft1p6d	241	5	Cryptococcus	Cryptococcus	NNP
cord-022053-idft1p6d	241	6	species	specie	NNS
cord-022053-idft1p6d	241	7	of	of	IN
cord-022053-idft1p6d	241	8	fungi	fungus	NNS
cord-022053-idft1p6d	241	9	,	,	,
cord-022053-idft1p6d	241	10	which	which	WDT
cord-022053-idft1p6d	241	11	is	be	VBZ
cord-022053-idft1p6d	241	12	very	very	RB
cord-022053-idft1p6d	241	13	valuable	valuable	JJ
cord-022053-idft1p6d	241	14	in	in	IN
cord-022053-idft1p6d	241	15	immunosuppressed	immunosuppressed	JJ
cord-022053-idft1p6d	241	16	populations	population	NNS
cord-022053-idft1p6d	241	17	.	.	.
cord-022053-idft1p6d	242	1	92	92	CD
cord-022053-idft1p6d	242	2	Current	current	JJ
cord-022053-idft1p6d	242	3	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	242	4	are	be	VBP
cord-022053-idft1p6d	242	5	heavily	heavily	RB
cord-022053-idft1p6d	242	6	focused	focus	VBN
cord-022053-idft1p6d	242	7	on	on	IN
cord-022053-idft1p6d	242	8	CSF	CSF	NNP
cord-022053-idft1p6d	242	9	biochemical	biochemical	JJ
cord-022053-idft1p6d	242	10	profile	profile	NN
cord-022053-idft1p6d	242	11	(	(	-LRB-
cord-022053-idft1p6d	242	12	glucose	glucose	NN
cord-022053-idft1p6d	242	13	,	,	,
cord-022053-idft1p6d	242	14	protein	protein	NN
cord-022053-idft1p6d	242	15	,	,	,
cord-022053-idft1p6d	242	16	lactate	lactate	NN
cord-022053-idft1p6d	242	17	)	)	-RRB-
cord-022053-idft1p6d	242	18	,	,	,
cord-022053-idft1p6d	242	19	cell	cell	NN
cord-022053-idft1p6d	242	20	count	count	NN
cord-022053-idft1p6d	242	21	,	,	,
cord-022053-idft1p6d	242	22	and	and	CC
cord-022053-idft1p6d	242	23	Gram	Gram	NNP
cord-022053-idft1p6d	242	24	stain	stain	NN
cord-022053-idft1p6d	242	25	.	.	.
cord-022053-idft1p6d	243	1	The	the	DT
cord-022053-idft1p6d	243	2	latter	latter	JJ
cord-022053-idft1p6d	243	3	is	be	VBZ
cord-022053-idft1p6d	243	4	the	the	DT
cord-022053-idft1p6d	243	5	most	most	RBS
cord-022053-idft1p6d	243	6	specific	specific	JJ
cord-022053-idft1p6d	243	7	,	,	,
cord-022053-idft1p6d	243	8	but	but	CC
cord-022053-idft1p6d	243	9	the	the	DT
cord-022053-idft1p6d	243	10	limit	limit	NN
cord-022053-idft1p6d	243	11	of	of	IN
cord-022053-idft1p6d	243	12	detection	detection	NN
cord-022053-idft1p6d	243	13	is	be	VBZ
cord-022053-idft1p6d	243	14	approximately	approximately	RB
cord-022053-idft1p6d	243	15	10	10	CD
cord-022053-idft1p6d	243	16	(	(	-LRB-
cord-022053-idft1p6d	243	17	4	4	CD
cord-022053-idft1p6d	243	18	)	)	-RRB-
cord-022053-idft1p6d	243	19	accomplished	accomplish	VBN
cord-022053-idft1p6d	243	20	by	by	IN
cord-022053-idft1p6d	243	21	the	the	DT
cord-022053-idft1p6d	243	22	introduction	introduction	NN
cord-022053-idft1p6d	243	23	of	of	IN
cord-022053-idft1p6d	243	24	helicase	helicase	NN
cord-022053-idft1p6d	243	25	,	,	,
cord-022053-idft1p6d	243	26	which	which	WDT
cord-022053-idft1p6d	243	27	unwinds	unwind	VBZ
cord-022053-idft1p6d	243	28	DNA	DNA	NNP
cord-022053-idft1p6d	243	29	,	,	,
cord-022053-idft1p6d	243	30	and	and	CC
cord-022053-idft1p6d	243	31	single	single	RB
cord-022053-idft1p6d	243	32	-	-	HYPH
cord-022053-idft1p6d	243	33	stranded	strand	VBN
cord-022053-idft1p6d	243	34	DNA	dna	NN
cord-022053-idft1p6d	243	35	binding	binding	NN
cord-022053-idft1p6d	243	36	proteins	protein	NNS
cord-022053-idft1p6d	243	37	,	,	,
cord-022053-idft1p6d	243	38	which	which	WDT
cord-022053-idft1p6d	243	39	keep	keep	VBP
cord-022053-idft1p6d	243	40	the	the	DT
cord-022053-idft1p6d	243	41	templates	template	NNS
cord-022053-idft1p6d	243	42	separated	separate	VBN
cord-022053-idft1p6d	243	43	.	.	.
cord-022053-idft1p6d	244	1	This	this	DT
cord-022053-idft1p6d	244	2	is	be	VBZ
cord-022053-idft1p6d	244	3	followed	follow	VBN
cord-022053-idft1p6d	244	4	by	by	IN
cord-022053-idft1p6d	244	5	primer	primer	NN
cord-022053-idft1p6d	244	6	hybridization	hybridization	NN
cord-022053-idft1p6d	244	7	and	and	CC
cord-022053-idft1p6d	244	8	amplification	amplification	NN
cord-022053-idft1p6d	244	9	to	to	TO
cord-022053-idft1p6d	244	10	produce	produce	VB
cord-022053-idft1p6d	244	11	more	more	JJR
cord-022053-idft1p6d	244	12	single	single	RB
cord-022053-idft1p6d	244	13	-	-	HYPH
cord-022053-idft1p6d	244	14	stranded	strand	VBN
cord-022053-idft1p6d	244	15	DNA	dna	NN
cord-022053-idft1p6d	244	16	and	and	CC
cord-022053-idft1p6d	244	17	thus	thus	RB
cord-022053-idft1p6d	244	18	a	a	DT
cord-022053-idft1p6d	244	19	continuous	continuous	JJ
cord-022053-idft1p6d	244	20	reaction	reaction	NN
cord-022053-idft1p6d	244	21	.	.	.
cord-022053-idft1p6d	245	1	Assays	assay	NNS
cord-022053-idft1p6d	245	2	to	to	TO
cord-022053-idft1p6d	245	3	measure	measure	VB
cord-022053-idft1p6d	245	4	herpes	herpes	NN
cord-022053-idft1p6d	245	5	simplex	simplex	NN
cord-022053-idft1p6d	245	6	virus	virus	NN
cord-022053-idft1p6d	246	1	(	(	-LRB-
cord-022053-idft1p6d	246	2	HSV)-1	HSV)-1	NNP
cord-022053-idft1p6d	246	3	and	and	CC
cord-022053-idft1p6d	246	4	HSV-2	HSV-2	NNP
cord-022053-idft1p6d	246	5	using	use	VBG
cord-022053-idft1p6d	246	6	helicase	helicase	NNP
cord-022053-idft1p6d	246	7	have	have	VBP
cord-022053-idft1p6d	246	8	been	be	VBN
cord-022053-idft1p6d	246	9	developed	develop	VBN
cord-022053-idft1p6d	246	10	with	with	IN
cord-022053-idft1p6d	246	11	similar	similar	JJ
cord-022053-idft1p6d	246	12	performance	performance	NN
cord-022053-idft1p6d	246	13	to	to	IN
cord-022053-idft1p6d	246	14	traditional	traditional	JJ
cord-022053-idft1p6d	246	15	molecular	molecular	JJ
cord-022053-idft1p6d	246	16	methods	method	NNS
cord-022053-idft1p6d	246	17	and	and	CC
cord-022053-idft1p6d	246	18	assays	assay	NNS
cord-022053-idft1p6d	246	19	are	be	VBP
cord-022053-idft1p6d	246	20	available	available	JJ
cord-022053-idft1p6d	246	21	for	for	IN
cord-022053-idft1p6d	246	22	Bordetella	Bordetella	NNP
cord-022053-idft1p6d	246	23	,	,	,
cord-022053-idft1p6d	246	24	group	group	NN
cord-022053-idft1p6d	246	25	A	a	DT
cord-022053-idft1p6d	246	26	Streptococcus	Streptococcus	NNP
cord-022053-idft1p6d	246	27	,	,	,
cord-022053-idft1p6d	246	28	Trichomonas	Trichomonas	NNP
cord-022053-idft1p6d	246	29	,	,	,
cord-022053-idft1p6d	246	30	and	and	CC
cord-022053-idft1p6d	246	31	malaria	malaria	NN
cord-022053-idft1p6d	246	32	.	.	.
cord-022053-idft1p6d	247	1	73	73	CD
cord-022053-idft1p6d	247	2	Commonly	commonly	RB
cord-022053-idft1p6d	247	3	used	use	VBN
cord-022053-idft1p6d	247	4	platforms	platform	NNS
cord-022053-idft1p6d	247	5	that	that	WDT
cord-022053-idft1p6d	247	6	use	use	VBP
cord-022053-idft1p6d	247	7	these	these	DT
cord-022053-idft1p6d	247	8	technologies	technology	NNS
cord-022053-idft1p6d	247	9	include	include	VBP
cord-022053-idft1p6d	247	10	the	the	DT
cord-022053-idft1p6d	247	11	Tigris	Tigris	NNP
cord-022053-idft1p6d	247	12	and	and	CC
cord-022053-idft1p6d	247	13	Panther	Panther	NNP
cord-022053-idft1p6d	247	14	systems	system	NNS
cord-022053-idft1p6d	247	15	by	by	IN
cord-022053-idft1p6d	247	16	Gen	Gen	NNP
cord-022053-idft1p6d	247	17	-	-	HYPH
cord-022053-idft1p6d	247	18	Probe	Probe	NNP
cord-022053-idft1p6d	247	19	,	,	,
cord-022053-idft1p6d	247	20	which	which	WDT
cord-022053-idft1p6d	247	21	are	be	VBP
cord-022053-idft1p6d	247	22	based	base	VBN
cord-022053-idft1p6d	247	23	on	on	IN
cord-022053-idft1p6d	247	24	TMA	TMA	NNP
cord-022053-idft1p6d	247	25	,	,	,
cord-022053-idft1p6d	247	26	SmMIT	SmMIT	NNP
cord-022053-idft1p6d	247	27	-	-	HYPH
cord-022053-idft1p6d	247	28	LAMP	LAMP	NNP
cord-022053-idft1p6d	247	29	based	base	VBN
cord-022053-idft1p6d	247	30	on	on	IN
cord-022053-idft1p6d	247	31	LAMP	lamp	NN
cord-022053-idft1p6d	247	32	,	,	,
cord-022053-idft1p6d	247	33	and	and	CC
cord-022053-idft1p6d	247	34	Ampli	Ampli	NNP
cord-022053-idft1p6d	247	35	-	-	HYPH
cord-022053-idft1p6d	247	36	Vue	Vue	NNP
cord-022053-idft1p6d	247	37	based	base	VBN
cord-022053-idft1p6d	247	38	on	on	IN
cord-022053-idft1p6d	247	39	helicase	helicase	NN
cord-022053-idft1p6d	247	40	.	.	.
cord-022053-idft1p6d	248	1	Use	use	NN
cord-022053-idft1p6d	248	2	of	of	IN
cord-022053-idft1p6d	248	3	these	these	DT
cord-022053-idft1p6d	248	4	assays	assay	NNS
cord-022053-idft1p6d	248	5	in	in	IN
cord-022053-idft1p6d	248	6	FFPE	FFPE	NNP
cord-022053-idft1p6d	248	7	tissue	tissue	NN
cord-022053-idft1p6d	248	8	has	have	VBZ
cord-022053-idft1p6d	248	9	shown	show	VBN
cord-022053-idft1p6d	248	10	some	some	DT
cord-022053-idft1p6d	248	11	promise	promise	NN
cord-022053-idft1p6d	248	12	with	with	IN
cord-022053-idft1p6d	248	13	improved	improved	JJ
cord-022053-idft1p6d	248	14	performance	performance	NN
cord-022053-idft1p6d	248	15	over	over	IN
cord-022053-idft1p6d	248	16	PCR	PCR	NNP
cord-022053-idft1p6d	248	17	for	for	IN
cord-022053-idft1p6d	248	18	some	some	DT
cord-022053-idft1p6d	248	19	organisms	organism	NNS
cord-022053-idft1p6d	248	20	(	(	-LRB-
cord-022053-idft1p6d	248	21	such	such	JJ
cord-022053-idft1p6d	248	22	as	as	IN
cord-022053-idft1p6d	248	23	HCV	HCV	NNP
cord-022053-idft1p6d	248	24	in	in	IN
cord-022053-idft1p6d	248	25	TMA	TMA	NNP
cord-022053-idft1p6d	248	26	)	)	-RRB-
cord-022053-idft1p6d	248	27	,	,	,
cord-022053-idft1p6d	248	28	equivalent	equivalent	JJ
cord-022053-idft1p6d	248	29	performance	performance	NN
cord-022053-idft1p6d	248	30	to	to	IN
cord-022053-idft1p6d	248	31	PCR	PCR	NNP
cord-022053-idft1p6d	248	32	(	(	-LRB-
cord-022053-idft1p6d	248	33	such	such	JJ
cord-022053-idft1p6d	248	34	as	as	IN
cord-022053-idft1p6d	248	35	human	human	JJ
cord-022053-idft1p6d	248	36	papillomavirus	papillomavirus	NN
cord-022053-idft1p6d	248	37	[	[	-LRB-
cord-022053-idft1p6d	248	38	HPV	HPV	NNP
cord-022053-idft1p6d	248	39	]	]	-RRB-
cord-022053-idft1p6d	248	40	in	in	IN
cord-022053-idft1p6d	248	41	head	head	NN
cord-022053-idft1p6d	248	42	and	and	CC
cord-022053-idft1p6d	248	43	neck	neck	NN
cord-022053-idft1p6d	248	44	cancers	cancer	NNS
cord-022053-idft1p6d	248	45	with	with	IN
cord-022053-idft1p6d	248	46	LAMP	LAMP	NNP
cord-022053-idft1p6d	248	47	)	)	-RRB-
cord-022053-idft1p6d	248	48	,	,	,
cord-022053-idft1p6d	248	49	and	and	CC
cord-022053-idft1p6d	248	50	detection	detection	NN
cord-022053-idft1p6d	248	51	of	of	IN
cord-022053-idft1p6d	248	52	limited	limited	JJ
cord-022053-idft1p6d	248	53	signatures	signature	NNS
cord-022053-idft1p6d	248	54	(	(	-LRB-
cord-022053-idft1p6d	248	55	such	such	JJ
cord-022053-idft1p6d	248	56	as	as	IN
cord-022053-idft1p6d	248	57	microcarcinomas	microcarcinomas	NN
cord-022053-idft1p6d	248	58	in	in	IN
cord-022053-idft1p6d	248	59	small	small	JJ
cord-022053-idft1p6d	248	60	biopsies	biopsy	NNS
cord-022053-idft1p6d	248	61	with	with	IN
cord-022053-idft1p6d	248	62	helicase	helicase	NN
cord-022053-idft1p6d	248	63	assays	assay	NNS
cord-022053-idft1p6d	248	64	)	)	-RRB-
cord-022053-idft1p6d	248	65	.	.	.
cord-022053-idft1p6d	249	1	[	[	-LRB-
cord-022053-idft1p6d	249	2	74	74	CD
cord-022053-idft1p6d	249	3	]	]	-RRB-
cord-022053-idft1p6d	249	4	[	[	-LRB-
cord-022053-idft1p6d	249	5	75	75	CD
cord-022053-idft1p6d	249	6	]	]	-RRB-
cord-022053-idft1p6d	250	1	[	[	-LRB-
cord-022053-idft1p6d	250	2	76	76	CD
cord-022053-idft1p6d	250	3	]	]	-RRB-
cord-022053-idft1p6d	250	4	 	 	_SP
cord-022053-idft1p6d	251	1	The	the	DT
cord-022053-idft1p6d	251	2	ability	ability	NN
cord-022053-idft1p6d	251	3	to	to	TO
cord-022053-idft1p6d	251	4	detect	detect	VB
cord-022053-idft1p6d	251	5	multiple	multiple	JJ
cord-022053-idft1p6d	251	6	organisms	organism	NNS
cord-022053-idft1p6d	251	7	in	in	IN
cord-022053-idft1p6d	251	8	primary	primary	JJ
cord-022053-idft1p6d	251	9	samples	sample	NNS
cord-022053-idft1p6d	251	10	using	use	VBG
cord-022053-idft1p6d	251	11	PCR	PCR	NNP
cord-022053-idft1p6d	251	12	-	-	HYPH
cord-022053-idft1p6d	251	13	based	base	VBN
cord-022053-idft1p6d	251	14	panels	panel	NNS
cord-022053-idft1p6d	251	15	has	have	VBZ
cord-022053-idft1p6d	251	16	both	both	DT
cord-022053-idft1p6d	251	17	provided	provide	VBN
cord-022053-idft1p6d	251	18	clinicians	clinician	NNS
cord-022053-idft1p6d	251	19	with	with	IN
cord-022053-idft1p6d	251	20	tremendous	tremendous	JJ
cord-022053-idft1p6d	251	21	diagnostic	diagnostic	JJ
cord-022053-idft1p6d	251	22	opportunities	opportunity	NNS
cord-022053-idft1p6d	251	23	and	and	CC
cord-022053-idft1p6d	251	24	presented	present	VBD
cord-022053-idft1p6d	251	25	new	new	JJ
cord-022053-idft1p6d	251	26	challenges	challenge	NNS
cord-022053-idft1p6d	251	27	.	.	.
cord-022053-idft1p6d	252	1	77	77	CD
cord-022053-idft1p6d	252	2	Major	major	JJ
cord-022053-idft1p6d	252	3	platforms	platform	NNS
cord-022053-idft1p6d	252	4	include	include	VBP
cord-022053-idft1p6d	252	5	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	252	6	(	(	-LRB-
cord-022053-idft1p6d	252	7	BioMérieux	BioMérieux	NNP
cord-022053-idft1p6d	252	8	)	)	-RRB-
cord-022053-idft1p6d	252	9	,	,	,
cord-022053-idft1p6d	252	10	Verigene	Verigene	NNP
cord-022053-idft1p6d	252	11	(	(	-LRB-
cord-022053-idft1p6d	252	12	Nanosphere	Nanosphere	NNP
cord-022053-idft1p6d	252	13	)	)	-RRB-
cord-022053-idft1p6d	252	14	,	,	,
cord-022053-idft1p6d	252	15	xTAG	xTAG	VBN
cord-022053-idft1p6d	252	16	/	/	SYM
cord-022053-idft1p6d	252	17	xMAP	xMAP	.
cord-022053-idft1p6d	253	1	(	(	-LRB-
cord-022053-idft1p6d	253	2	Luminex	Luminex	NNP
cord-022053-idft1p6d	253	3	,	,	,
cord-022053-idft1p6d	253	4	Austin	Austin	NNP
cord-022053-idft1p6d	253	5	,	,	,
cord-022053-idft1p6d	253	6	Texas	Texas	NNP
cord-022053-idft1p6d	253	7	)	)	-RRB-
cord-022053-idft1p6d	253	8	,	,	,
cord-022053-idft1p6d	253	9	with	with	IN
cord-022053-idft1p6d	253	10	technologies	technology	NNS
cord-022053-idft1p6d	253	11	that	that	WDT
cord-022053-idft1p6d	253	12	range	range	VBP
cord-022053-idft1p6d	253	13	from	from	IN
cord-022053-idft1p6d	253	14	real	real	JJ
cord-022053-idft1p6d	253	15	-	-	HYPH
cord-022053-idft1p6d	253	16	time	time	NN
cord-022053-idft1p6d	253	17	PCR	PCR	NNP
cord-022053-idft1p6d	253	18	to	to	TO
cord-022053-idft1p6d	253	19	solid	solid	JJ
cord-022053-idft1p6d	253	20	and	and	CC
cord-022053-idft1p6d	253	21	liquid	liquid	JJ
cord-022053-idft1p6d	253	22	phase	phase	NN
cord-022053-idft1p6d	253	23	arrays	array	NNS
cord-022053-idft1p6d	253	24	.	.	.
cord-022053-idft1p6d	254	1	For	for	IN
cord-022053-idft1p6d	254	2	a	a	DT
cord-022053-idft1p6d	254	3	comprehensive	comprehensive	JJ
cord-022053-idft1p6d	254	4	listing	listing	NN
cord-022053-idft1p6d	254	5	of	of	IN
cord-022053-idft1p6d	254	6	platforms	platform	NNS
cord-022053-idft1p6d	254	7	see	see	VB
cord-022053-idft1p6d	254	8	www.captodayonline.com/	www.captodayonline.com/	NNP
cord-022053-idft1p6d	254	9	productguides	productguide	NNS
cord-022053-idft1p6d	254	10	.	.	.
cord-022053-idft1p6d	255	1	For	for	IN
cord-022053-idft1p6d	255	2	an	an	DT
cord-022053-idft1p6d	255	3	in	in	IN
cord-022053-idft1p6d	255	4	-	-	HYPH
cord-022053-idft1p6d	255	5	depth	depth	NN
cord-022053-idft1p6d	255	6	discussion	discussion	NN
cord-022053-idft1p6d	255	7	of	of	IN
cord-022053-idft1p6d	255	8	the	the	DT
cord-022053-idft1p6d	255	9	major	major	JJ
cord-022053-idft1p6d	255	10	technologies	technology	NNS
cord-022053-idft1p6d	255	11	see	see	VBP
cord-022053-idft1p6d	255	12	the	the	DT
cord-022053-idft1p6d	255	13	articles	article	NNS
cord-022053-idft1p6d	255	14	included	include	VBN
cord-022053-idft1p6d	255	15	in	in	IN
cord-022053-idft1p6d	255	16	the	the	DT
cord-022053-idft1p6d	255	17	reference	reference	NN
cord-022053-idft1p6d	255	18	list	list	NN
cord-022053-idft1p6d	255	19	.	.	.
cord-022053-idft1p6d	256	1	78	78	CD
cord-022053-idft1p6d	256	2	,	,	,
cord-022053-idft1p6d	256	3	79	79	CD
cord-022053-idft1p6d	257	1	These	these	DT
cord-022053-idft1p6d	257	2	systems	system	NNS
cord-022053-idft1p6d	257	3	are	be	VBP
cord-022053-idft1p6d	257	4	generally	generally	RB
cord-022053-idft1p6d	257	5	geared	gear	VBN
cord-022053-idft1p6d	257	6	towards	towards	IN
cord-022053-idft1p6d	257	7	syndromic	syndromic	JJ
cord-022053-idft1p6d	257	8	testing	testing	NN
cord-022053-idft1p6d	257	9	,	,	,
cord-022053-idft1p6d	257	10	with	with	IN
cord-022053-idft1p6d	257	11	panels	panel	NNS
cord-022053-idft1p6d	257	12	directed	direct	VBN
cord-022053-idft1p6d	257	13	towards	towards	IN
cord-022053-idft1p6d	257	14	respiratory	respiratory	JJ
cord-022053-idft1p6d	257	15	,	,	,
cord-022053-idft1p6d	257	16	GI	GI	NNP
cord-022053-idft1p6d	257	17	,	,	,
cord-022053-idft1p6d	257	18	and	and	CC
cord-022053-idft1p6d	257	19	sexually	sexually	RB
cord-022053-idft1p6d	257	20	transmitted	transmit	VBN
cord-022053-idft1p6d	257	21	diseases	disease	NNS
cord-022053-idft1p6d	257	22	,	,	,
cord-022053-idft1p6d	257	23	as	as	RB
cord-022053-idft1p6d	257	24	well	well	RB
cord-022053-idft1p6d	257	25	as	as	IN
cord-022053-idft1p6d	257	26	meningitis	meningitis	NN
cord-022053-idft1p6d	257	27	and	and	CC
cord-022053-idft1p6d	257	28	bloodstream	bloodstream	NN
cord-022053-idft1p6d	257	29	infections	infection	NNS
cord-022053-idft1p6d	257	30	.	.	.
cord-022053-idft1p6d	258	1	After	after	IN
cord-022053-idft1p6d	258	2	discussing	discuss	VBG
cord-022053-idft1p6d	258	3	the	the	DT
cord-022053-idft1p6d	258	4	specific	specific	JJ
cord-022053-idft1p6d	258	5	challenges	challenge	NNS
cord-022053-idft1p6d	258	6	of	of	IN
cord-022053-idft1p6d	258	7	each	each	DT
cord-022053-idft1p6d	258	8	of	of	IN
cord-022053-idft1p6d	258	9	the	the	DT
cord-022053-idft1p6d	258	10	major	major	JJ
cord-022053-idft1p6d	258	11	syndromes	syndrome	NNS
cord-022053-idft1p6d	258	12	,	,	,
cord-022053-idft1p6d	258	13	this	this	DT
cord-022053-idft1p6d	258	14	section	section	NN
cord-022053-idft1p6d	258	15	will	will	MD
cord-022053-idft1p6d	258	16	focus	focus	VB
cord-022053-idft1p6d	258	17	on	on	IN
cord-022053-idft1p6d	258	18	commonly	commonly	RB
cord-022053-idft1p6d	258	19	used	use	VBN
cord-022053-idft1p6d	258	20	FDA	FDA	NNP
cord-022053-idft1p6d	258	21	-	-	HYPH
cord-022053-idft1p6d	258	22	approved	approve	VBN
cord-022053-idft1p6d	258	23	panels	panel	NNS
cord-022053-idft1p6d	258	24	that	that	WDT
cord-022053-idft1p6d	258	25	are	be	VBP
cord-022053-idft1p6d	258	26	currently	currently	RB
cord-022053-idft1p6d	258	27	available	available	JJ
cord-022053-idft1p6d	258	28	from	from	IN
cord-022053-idft1p6d	258	29	a	a	DT
cord-022053-idft1p6d	258	30	number	number	NN
cord-022053-idft1p6d	258	31	of	of	IN
cord-022053-idft1p6d	258	32	manufacturers	manufacturer	NNS
cord-022053-idft1p6d	258	33	and	and	CC
cord-022053-idft1p6d	258	34	that	that	IN
cord-022053-idft1p6d	258	35	scan	scan	NN
cord-022053-idft1p6d	258	36	for	for	IN
cord-022053-idft1p6d	258	37	a	a	DT
cord-022053-idft1p6d	258	38	wide	wide	JJ
cord-022053-idft1p6d	258	39	array	array	NN
cord-022053-idft1p6d	258	40	of	of	IN
cord-022053-idft1p6d	258	41	microbes	microbe	NNS
cord-022053-idft1p6d	258	42	,	,	,
cord-022053-idft1p6d	258	43	encompassing	encompass	VBG
cord-022053-idft1p6d	258	44	viral	viral	JJ
cord-022053-idft1p6d	258	45	,	,	,
cord-022053-idft1p6d	258	46	bacterial	bacterial	JJ
cord-022053-idft1p6d	258	47	,	,	,
cord-022053-idft1p6d	258	48	and	and	CC
cord-022053-idft1p6d	258	49	fungal	fungal	JJ
cord-022053-idft1p6d	258	50	organisms	organism	NNS
cord-022053-idft1p6d	258	51	.	.	.
cord-022053-idft1p6d	259	1	Panels	panel	NNS
cord-022053-idft1p6d	259	2	aimed	aim	VBN
cord-022053-idft1p6d	259	3	at	at	IN
cord-022053-idft1p6d	259	4	respiratory	respiratory	JJ
cord-022053-idft1p6d	259	5	pathogens	pathogen	NNS
cord-022053-idft1p6d	259	6	are	be	VBP
cord-022053-idft1p6d	259	7	focused	focus	VBN
cord-022053-idft1p6d	259	8	most	most	RBS
cord-022053-idft1p6d	259	9	heavily	heavily	RB
cord-022053-idft1p6d	259	10	on	on	IN
cord-022053-idft1p6d	259	11	viruses	virus	NNS
cord-022053-idft1p6d	259	12	but	but	CC
cord-022053-idft1p6d	259	13	also	also	RB
cord-022053-idft1p6d	259	14	incorporate	incorporate	VB
cord-022053-idft1p6d	259	15	several	several	JJ
cord-022053-idft1p6d	259	16	bacterial	bacterial	JJ
cord-022053-idft1p6d	259	17	agents	agent	NNS
cord-022053-idft1p6d	259	18	.	.	.
cord-022053-idft1p6d	260	1	80	80	CD
cord-022053-idft1p6d	260	2	,	,	,
cord-022053-idft1p6d	260	3	81	81	CD
cord-022053-idft1p6d	260	4	Commonly	commonly	RB
cord-022053-idft1p6d	260	5	covered	cover	VBN
cord-022053-idft1p6d	260	6	organisms	organism	NNS
cord-022053-idft1p6d	260	7	include	include	VBP
cord-022053-idft1p6d	260	8	Mycoplasma	mycoplasma	NN
cord-022053-idft1p6d	260	9	pneumoniae	pneumoniae	NNS
cord-022053-idft1p6d	260	10	,	,	,
cord-022053-idft1p6d	260	11	Chlamydia	Chlamydia	NNP
cord-022053-idft1p6d	260	12	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	260	13	,	,	,
cord-022053-idft1p6d	260	14	and	and	CC
cord-022053-idft1p6d	260	15	Bordetella	Bordetella	NNP
cord-022053-idft1p6d	260	16	species	specie	NNS
cord-022053-idft1p6d	260	17	.	.	.
cord-022053-idft1p6d	261	1	M.	M.	NNP
cord-022053-idft1p6d	261	2	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	261	3	and	and	CC
cord-022053-idft1p6d	261	4	C.	C.	NNP
cord-022053-idft1p6d	261	5	pneumoniae	pneumoniae	NNS
cord-022053-idft1p6d	261	6	,	,	,
cord-022053-idft1p6d	261	7	both	both	CC
cord-022053-idft1p6d	261	8	very	very	RB
cord-022053-idft1p6d	261	9	common	common	JJ
cord-022053-idft1p6d	261	10	causes	cause	NNS
cord-022053-idft1p6d	261	11	of	of	IN
cord-022053-idft1p6d	261	12	communityacquired	communityacquired	JJ
cord-022053-idft1p6d	261	13	pneumonia	pneumonia	NN
cord-022053-idft1p6d	261	14	,	,	,
cord-022053-idft1p6d	261	15	are	be	VBP
cord-022053-idft1p6d	261	16	particularly	particularly	RB
cord-022053-idft1p6d	261	17	well	well	RB
cord-022053-idft1p6d	261	18	-	-	HYPH
cord-022053-idft1p6d	261	19	suited	suit	VBN
cord-022053-idft1p6d	261	20	to	to	IN
cord-022053-idft1p6d	261	21	nucleic	nucleic	JJ
cord-022053-idft1p6d	261	22	acid	acid	NN
cord-022053-idft1p6d	261	23	amplification	amplification	NN
cord-022053-idft1p6d	261	24	tests	test	NNS
cord-022053-idft1p6d	261	25	because	because	IN
cord-022053-idft1p6d	261	26	they	-PRON-	PRP
cord-022053-idft1p6d	261	27	are	be	VBP
cord-022053-idft1p6d	261	28	difficult	difficult	JJ
cord-022053-idft1p6d	261	29	to	to	TO
cord-022053-idft1p6d	261	30	culture	culture	NN
cord-022053-idft1p6d	261	31	.	.	.
cord-022053-idft1p6d	262	1	82	82	CD
cord-022053-idft1p6d	263	1	Although	although	IN
cord-022053-idft1p6d	263	2	less	less	RBR
cord-022053-idft1p6d	263	3	common	common	JJ
cord-022053-idft1p6d	263	4	,	,	,
cord-022053-idft1p6d	263	5	Bordetella	Bordetella	NNP
cord-022053-idft1p6d	263	6	pertussis	pertussis	NN
cord-022053-idft1p6d	263	7	is	be	VBZ
cord-022053-idft1p6d	263	8	considered	consider	VBN
cord-022053-idft1p6d	263	9	to	to	TO
cord-022053-idft1p6d	263	10	be	be	VB
cord-022053-idft1p6d	263	11	the	the	DT
cord-022053-idft1p6d	263	12	most	most	RBS
cord-022053-idft1p6d	263	13	common	common	JJ
cord-022053-idft1p6d	263	14	vaccine	vaccine	NN
cord-022053-idft1p6d	263	15	-	-	HYPH
cord-022053-idft1p6d	263	16	preventable	preventable	JJ
cord-022053-idft1p6d	263	17	disease	disease	NN
cord-022053-idft1p6d	263	18	in	in	IN
cord-022053-idft1p6d	263	19	the	the	DT
cord-022053-idft1p6d	263	20	United	United	NNP
cord-022053-idft1p6d	263	21	States	States	NNP
cord-022053-idft1p6d	263	22	,	,	,
cord-022053-idft1p6d	263	23	is	be	VBZ
cord-022053-idft1p6d	263	24	increasing	increase	VBG
cord-022053-idft1p6d	263	25	in	in	IN
cord-022053-idft1p6d	263	26	incidence	incidence	NN
cord-022053-idft1p6d	263	27	,	,	,
cord-022053-idft1p6d	263	28	and	and	CC
cord-022053-idft1p6d	263	29	is	be	VBZ
cord-022053-idft1p6d	263	30	also	also	RB
cord-022053-idft1p6d	263	31	difficult	difficult	JJ
cord-022053-idft1p6d	263	32	to	to	TO
cord-022053-idft1p6d	263	33	culture	culture	NN
cord-022053-idft1p6d	263	34	.	.	.
cord-022053-idft1p6d	264	1	83	83	CD
cord-022053-idft1p6d	265	1	The	the	DT
cord-022053-idft1p6d	265	2	"	"	``
cord-022053-idft1p6d	265	3	bread	bread	NN
cord-022053-idft1p6d	265	4	and	and	CC
cord-022053-idft1p6d	265	5	butter	butter	NN
cord-022053-idft1p6d	265	6	"	"	''
cord-022053-idft1p6d	265	7	of	of	IN
cord-022053-idft1p6d	265	8	respiratory	respiratory	JJ
cord-022053-idft1p6d	265	9	panels	panel	NNS
cord-022053-idft1p6d	265	10	(	(	-LRB-
cord-022053-idft1p6d	265	11	RPs	rp	NNS
cord-022053-idft1p6d	265	12	)	)	-RRB-
cord-022053-idft1p6d	265	13	focus	focus	VBP
cord-022053-idft1p6d	265	14	on	on	IN
cord-022053-idft1p6d	265	15	viruses	virus	NNS
cord-022053-idft1p6d	265	16	with	with	IN
cord-022053-idft1p6d	265	17	influenza	influenza	NN
cord-022053-idft1p6d	265	18	A	a	NN
cord-022053-idft1p6d	265	19	(	(	-LRB-
cord-022053-idft1p6d	265	20	and	and	CC
cord-022053-idft1p6d	265	21	B	B	NNP
cord-022053-idft1p6d	265	22	)	)	-RRB-
cord-022053-idft1p6d	265	23	,	,	,
cord-022053-idft1p6d	265	24	adenovirus	adenovirus	NN
cord-022053-idft1p6d	265	25	,	,	,
cord-022053-idft1p6d	265	26	and	and	CC
cord-022053-idft1p6d	265	27	respiratory	respiratory	JJ
cord-022053-idft1p6d	265	28	syncytial	syncytial	JJ
cord-022053-idft1p6d	265	29	virus	virus	NN
cord-022053-idft1p6d	265	30	(	(	-LRB-
cord-022053-idft1p6d	265	31	RSV	RSV	NNP
cord-022053-idft1p6d	265	32	)	)	-RRB-
cord-022053-idft1p6d	265	33	being	be	VBG
cord-022053-idft1p6d	265	34	always	always	RB
cord-022053-idft1p6d	265	35	including	include	VBG
cord-022053-idft1p6d	265	36	,	,	,
cord-022053-idft1p6d	265	37	along	along	IN
cord-022053-idft1p6d	265	38	with	with	IN
cord-022053-idft1p6d	265	39	a	a	DT
cord-022053-idft1p6d	265	40	mixture	mixture	NN
cord-022053-idft1p6d	265	41	of	of	IN
cord-022053-idft1p6d	265	42	other	other	JJ
cord-022053-idft1p6d	265	43	coronavirus	coronavirus	NN
cord-022053-idft1p6d	265	44	,	,	,
cord-022053-idft1p6d	265	45	enterovirus	enterovirus	NN
cord-022053-idft1p6d	265	46	,	,	,
cord-022053-idft1p6d	265	47	metapneumovirus	metapneumovirus	NNP
cord-022053-idft1p6d	265	48	,	,	,
cord-022053-idft1p6d	265	49	and	and	CC
cord-022053-idft1p6d	265	50	the	the	DT
cord-022053-idft1p6d	265	51	parainfluenza	parainfluenza	NNP
cord-022053-idft1p6d	265	52	group	group	NNP
cord-022053-idft1p6d	265	53	.	.	.
cord-022053-idft1p6d	266	1	These	these	DT
cord-022053-idft1p6d	266	2	panels	panel	NNS
cord-022053-idft1p6d	266	3	are	be	VBP
cord-022053-idft1p6d	266	4	extremely	extremely	RB
cord-022053-idft1p6d	266	5	powerful	powerful	JJ
cord-022053-idft1p6d	266	6	from	from	IN
cord-022053-idft1p6d	266	7	the	the	DT
cord-022053-idft1p6d	266	8	clinician	clinician	NN
cord-022053-idft1p6d	266	9	's	's	POS
cord-022053-idft1p6d	266	10	point	point	NN
cord-022053-idft1p6d	266	11	of	of	IN
cord-022053-idft1p6d	266	12	view	view	NN
cord-022053-idft1p6d	266	13	but	but	CC
cord-022053-idft1p6d	266	14	also	also	RB
cord-022053-idft1p6d	266	15	provide	provide	VB
cord-022053-idft1p6d	266	16	a	a	DT
cord-022053-idft1p6d	266	17	larger	large	JJR
cord-022053-idft1p6d	266	18	range	range	NN
cord-022053-idft1p6d	266	19	of	of	IN
cord-022053-idft1p6d	266	20	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	266	21	for	for	IN
cord-022053-idft1p6d	266	22	respiratory	respiratory	JJ
cord-022053-idft1p6d	266	23	viruses	virus	NNS
cord-022053-idft1p6d	266	24	than	than	IN
cord-022053-idft1p6d	266	25	can	can	MD
cord-022053-idft1p6d	266	26	be	be	VB
cord-022053-idft1p6d	266	27	found	find	VBN
cord-022053-idft1p6d	266	28	in	in	IN
cord-022053-idft1p6d	266	29	most	most	JJS
cord-022053-idft1p6d	266	30	anatomic	anatomic	JJ
cord-022053-idft1p6d	266	31	pathology	pathology	NN
cord-022053-idft1p6d	266	32	labs	lab	NNS
cord-022053-idft1p6d	266	33	,	,	,
cord-022053-idft1p6d	266	34	which	which	WDT
cord-022053-idft1p6d	266	35	are	be	VBP
cord-022053-idft1p6d	266	36	largely	largely	RB
cord-022053-idft1p6d	266	37	limited	limited	JJ
cord-022053-idft1p6d	266	38	to	to	IN
cord-022053-idft1p6d	266	39	the	the	DT
cord-022053-idft1p6d	266	40	DNA	dna	NN
cord-022053-idft1p6d	266	41	viruses	virus	NNS
cord-022053-idft1p6d	266	42	.	.	.
cord-022053-idft1p6d	267	1	Although	although	IN
cord-022053-idft1p6d	267	2	not	not	RB
cord-022053-idft1p6d	267	3	all	all	DT
cord-022053-idft1p6d	267	4	of	of	IN
cord-022053-idft1p6d	267	5	these	these	DT
cord-022053-idft1p6d	267	6	viral	viral	JJ
cord-022053-idft1p6d	267	7	diagnoses	diagnosis	NNS
cord-022053-idft1p6d	267	8	are	be	VBP
cord-022053-idft1p6d	267	9	chemotherapeutically	chemotherapeutically	RB
cord-022053-idft1p6d	267	10	actionable	actionable	JJ
cord-022053-idft1p6d	267	11	,	,	,
cord-022053-idft1p6d	267	12	confirmation	confirmation	NN
cord-022053-idft1p6d	267	13	of	of	IN
cord-022053-idft1p6d	267	14	a	a	DT
cord-022053-idft1p6d	267	15	viral	viral	JJ
cord-022053-idft1p6d	267	16	cause	cause	NN
cord-022053-idft1p6d	267	17	is	be	VBZ
cord-022053-idft1p6d	267	18	valuable	valuable	JJ
cord-022053-idft1p6d	267	19	for	for	IN
cord-022053-idft1p6d	267	20	prognosis	prognosis	NN
cord-022053-idft1p6d	267	21	and	and	CC
cord-022053-idft1p6d	267	22	resource	resource	NN
cord-022053-idft1p6d	267	23	allocation	allocation	NN
cord-022053-idft1p6d	267	24	.	.	.
cord-022053-idft1p6d	268	1	Diarrheal	diarrheal	JJ
cord-022053-idft1p6d	268	2	diseases	disease	NNS
cord-022053-idft1p6d	268	3	are	be	VBP
cord-022053-idft1p6d	268	4	a	a	DT
cord-022053-idft1p6d	268	5	global	global	JJ
cord-022053-idft1p6d	268	6	public	public	JJ
cord-022053-idft1p6d	268	7	health	health	NN
cord-022053-idft1p6d	268	8	concern	concern	NN
cord-022053-idft1p6d	268	9	.	.	.
cord-022053-idft1p6d	269	1	Although	although	IN
cord-022053-idft1p6d	269	2	these	these	DT
cord-022053-idft1p6d	269	3	diseases	disease	NNS
cord-022053-idft1p6d	269	4	are	be	VBP
cord-022053-idft1p6d	269	5	a	a	DT
cord-022053-idft1p6d	269	6	common	common	JJ
cord-022053-idft1p6d	269	7	cause	cause	NN
cord-022053-idft1p6d	269	8	of	of	IN
cord-022053-idft1p6d	269	9	illness	illness	NN
cord-022053-idft1p6d	269	10	and	and	CC
cord-022053-idft1p6d	269	11	hospitalization	hospitalization	NN
cord-022053-idft1p6d	269	12	in	in	IN
cord-022053-idft1p6d	269	13	the	the	DT
cord-022053-idft1p6d	269	14	United	United	NNP
cord-022053-idft1p6d	269	15	States	States	NNP
cord-022053-idft1p6d	269	16	,	,	,
cord-022053-idft1p6d	269	17	they	-PRON-	PRP
cord-022053-idft1p6d	269	18	impose	impose	VBP
cord-022053-idft1p6d	269	19	an	an	DT
cord-022053-idft1p6d	269	20	enormous	enormous	JJ
cord-022053-idft1p6d	269	21	toll	toll	NN
cord-022053-idft1p6d	269	22	in	in	IN
cord-022053-idft1p6d	269	23	the	the	DT
cord-022053-idft1p6d	269	24	developing	develop	VBG
cord-022053-idft1p6d	269	25	world	world	NN
cord-022053-idft1p6d	269	26	,	,	,
cord-022053-idft1p6d	269	27	particularly	particularly	RB
cord-022053-idft1p6d	269	28	on	on	IN
cord-022053-idft1p6d	269	29	children	child	NNS
cord-022053-idft1p6d	269	30	.	.	.
cord-022053-idft1p6d	270	1	The	the	DT
cord-022053-idft1p6d	270	2	most	most	RBS
cord-022053-idft1p6d	270	3	common	common	JJ
cord-022053-idft1p6d	270	4	bacterial	bacterial	JJ
cord-022053-idft1p6d	270	5	99.5	99.5	CD
cord-022053-idft1p6d	270	6	%	%	NN
cord-022053-idft1p6d	270	7	to	to	TO
cord-022053-idft1p6d	270	8	100	100	CD
cord-022053-idft1p6d	270	9	%	%	NN
cord-022053-idft1p6d	270	10	)	)	-RRB-
cord-022053-idft1p6d	270	11	,	,	.
cord-022053-idft1p6d	271	1	but	but	CC
cord-022053-idft1p6d	271	2	,	,	,
cord-022053-idft1p6d	271	3	as	as	IN
cord-022053-idft1p6d	271	4	has	have	VBZ
cord-022053-idft1p6d	271	5	been	be	VBN
cord-022053-idft1p6d	271	6	common	common	JJ
cord-022053-idft1p6d	271	7	with	with	IN
cord-022053-idft1p6d	271	8	many	many	JJ
cord-022053-idft1p6d	271	9	panels	panel	NNS
cord-022053-idft1p6d	271	10	and	and	CC
cord-022053-idft1p6d	271	11	individual	individual	JJ
cord-022053-idft1p6d	271	12	tests	test	NNS
cord-022053-idft1p6d	271	13	,	,	,
cord-022053-idft1p6d	271	14	laboratories	laboratory	NNS
cord-022053-idft1p6d	271	15	have	have	VBP
cord-022053-idft1p6d	271	16	difficulty	difficulty	NN
cord-022053-idft1p6d	271	17	obtaining	obtain	VBG
cord-022053-idft1p6d	271	18	natural	natural	JJ
cord-022053-idft1p6d	271	19	clinical	clinical	JJ
cord-022053-idft1p6d	271	20	cases	case	NNS
cord-022053-idft1p6d	271	21	of	of	IN
cord-022053-idft1p6d	271	22	E.	E.	NNP
cord-022053-idft1p6d	271	23	histolytica	histolytica	NNP
cord-022053-idft1p6d	271	24	.	.	.
cord-022053-idft1p6d	272	1	103	103	CD
cord-022053-idft1p6d	273	1	Currently	currently	RB
cord-022053-idft1p6d	273	2	,	,	,
cord-022053-idft1p6d	273	3	the	the	DT
cord-022053-idft1p6d	273	4	only	only	JJ
cord-022053-idft1p6d	273	5	FDA	FDA	NNP
cord-022053-idft1p6d	273	6	-	-	HYPH
cord-022053-idft1p6d	273	7	approved	approve	VBN
cord-022053-idft1p6d	273	8	multiplex	multiplex	NN
cord-022053-idft1p6d	273	9	assay	assay	NN
cord-022053-idft1p6d	273	10	for	for	IN
cord-022053-idft1p6d	273	11	agents	agent	NNS
cord-022053-idft1p6d	273	12	of	of	IN
cord-022053-idft1p6d	273	13	meningitis	meningitis	NN
cord-022053-idft1p6d	273	14	and	and	CC
cord-022053-idft1p6d	273	15	encephalitis	encephalitis	NN
cord-022053-idft1p6d	273	16	is	be	VBZ
cord-022053-idft1p6d	273	17	the	the	DT
cord-022053-idft1p6d	273	18	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	273	19	meningitis	meningitis	NN
cord-022053-idft1p6d	273	20	panel	panel	NN
cord-022053-idft1p6d	273	21	.	.	.
cord-022053-idft1p6d	274	1	It	-PRON-	PRP
cord-022053-idft1p6d	274	2	covers	cover	VBZ
cord-022053-idft1p6d	274	3	14	14	CD
cord-022053-idft1p6d	274	4	pathogens	pathogen	NNS
cord-022053-idft1p6d	274	5	,	,	,
cord-022053-idft1p6d	274	6	including	include	VBG
cord-022053-idft1p6d	274	7	the	the	DT
cord-022053-idft1p6d	274	8	following	follow	VBG
cord-022053-idft1p6d	274	9	bacteria	bacteria	NNS
cord-022053-idft1p6d	274	10	:	:	:
cord-022053-idft1p6d	274	11	E.	E.	NNP
cord-022053-idft1p6d	274	12	coli	coli	VBZ
cord-022053-idft1p6d	274	13	K1	K1	NNP
cord-022053-idft1p6d	274	14	,	,	,
cord-022053-idft1p6d	274	15	H.	H.	NNP
cord-022053-idft1p6d	274	16	influenza	influenza	NN
cord-022053-idft1p6d	274	17	,	,	,
cord-022053-idft1p6d	274	18	L.	L.	NNP
cord-022053-idft1p6d	274	19	monocytogenes	monocytogenes	NNP
cord-022053-idft1p6d	274	20	,	,	,
cord-022053-idft1p6d	274	21	N.	N.	NNP
cord-022053-idft1p6d	274	22	meningitides	meningitide	NNS
cord-022053-idft1p6d	274	23	,	,	,
cord-022053-idft1p6d	274	24	S.	S.	NNP
cord-022053-idft1p6d	274	25	agalactiae	agalactiae	NNP
cord-022053-idft1p6d	274	26	,	,	,
cord-022053-idft1p6d	274	27	and	and	CC
cord-022053-idft1p6d	274	28	S.	S.	NNP
cord-022053-idft1p6d	274	29	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	274	30	.	.	.
cord-022053-idft1p6d	275	1	Although	although	IN
cord-022053-idft1p6d	275	2	the	the	DT
cord-022053-idft1p6d	275	3	panel	panel	NN
cord-022053-idft1p6d	275	4	was	be	VBD
cord-022053-idft1p6d	275	5	only	only	RB
cord-022053-idft1p6d	275	6	recently	recently	RB
cord-022053-idft1p6d	275	7	approved	approve	VBN
cord-022053-idft1p6d	275	8	by	by	IN
cord-022053-idft1p6d	275	9	the	the	DT
cord-022053-idft1p6d	275	10	FDA	FDA	NNP
cord-022053-idft1p6d	275	11	(	(	-LRB-
cord-022053-idft1p6d	275	12	October	October	NNP
cord-022053-idft1p6d	275	13	2015	2015	CD
cord-022053-idft1p6d	275	14	)	)	-RRB-
cord-022053-idft1p6d	275	15	,	,	,
cord-022053-idft1p6d	275	16	there	there	EX
cord-022053-idft1p6d	275	17	are	be	VBP
cord-022053-idft1p6d	275	18	a	a	DT
cord-022053-idft1p6d	275	19	few	few	JJ
cord-022053-idft1p6d	275	20	reports	report	NNS
cord-022053-idft1p6d	275	21	of	of	IN
cord-022053-idft1p6d	275	22	its	-PRON-	PRP$
cord-022053-idft1p6d	275	23	performance	performance	NN
cord-022053-idft1p6d	275	24	.	.	.
cord-022053-idft1p6d	276	1	The	the	DT
cord-022053-idft1p6d	276	2	pre	pre	JJ
cord-022053-idft1p6d	276	3	-	-	JJ
cord-022053-idft1p6d	276	4	FDA	FDA	NNP
cord-022053-idft1p6d	276	5	evaluation	evaluation	NN
cord-022053-idft1p6d	276	6	was	be	VBD
cord-022053-idft1p6d	276	7	conducted	conduct	VBN
cord-022053-idft1p6d	276	8	both	both	CC
cord-022053-idft1p6d	276	9	on	on	IN
cord-022053-idft1p6d	276	10	archived	archived	JJ
cord-022053-idft1p6d	276	11	samples	sample	NNS
cord-022053-idft1p6d	276	12	and	and	CC
cord-022053-idft1p6d	276	13	prospectively	prospectively	RB
cord-022053-idft1p6d	276	14	on	on	IN
cord-022053-idft1p6d	276	15	a	a	DT
cord-022053-idft1p6d	276	16	multicenter	multicenter	JJ
cord-022053-idft1p6d	276	17	collection	collection	NN
cord-022053-idft1p6d	276	18	of	of	IN
cord-022053-idft1p6d	276	19	1560	1560	CD
cord-022053-idft1p6d	276	20	samples	sample	NNS
cord-022053-idft1p6d	276	21	of	of	IN
cord-022053-idft1p6d	276	22	CSF	CSF	NNP
cord-022053-idft1p6d	276	23	.	.	.
cord-022053-idft1p6d	277	1	Among	among	IN
cord-022053-idft1p6d	277	2	235	235	CD
cord-022053-idft1p6d	277	3	archived	archived	JJ
cord-022053-idft1p6d	277	4	samples	sample	NNS
cord-022053-idft1p6d	277	5	(	(	-LRB-
cord-022053-idft1p6d	277	6	32	32	CD
cord-022053-idft1p6d	277	7	with	with	IN
cord-022053-idft1p6d	277	8	bacteria	bacteria	NNS
cord-022053-idft1p6d	277	9	)	)	-RRB-
cord-022053-idft1p6d	277	10	,	,	,
cord-022053-idft1p6d	277	11	the	the	DT
cord-022053-idft1p6d	277	12	percent	percent	NN
cord-022053-idft1p6d	277	13	positive	positive	JJ
cord-022053-idft1p6d	277	14	and	and	CC
cord-022053-idft1p6d	277	15	negative	negative	JJ
cord-022053-idft1p6d	277	16	agreement	agreement	NN
cord-022053-idft1p6d	277	17	was	be	VBD
cord-022053-idft1p6d	277	18	100	100	CD
cord-022053-idft1p6d	277	19	%	%	NN
cord-022053-idft1p6d	277	20	for	for	IN
cord-022053-idft1p6d	277	21	bacterial	bacterial	JJ
cord-022053-idft1p6d	277	22	targets	target	NNS
cord-022053-idft1p6d	277	23	.	.	.
cord-022053-idft1p6d	278	1	Among	among	IN
cord-022053-idft1p6d	278	2	the	the	DT
cord-022053-idft1p6d	278	3	1560	1560	CD
cord-022053-idft1p6d	278	4	prospective	prospective	JJ
cord-022053-idft1p6d	278	5	samples	sample	NNS
cord-022053-idft1p6d	278	6	,	,	,
cord-022053-idft1p6d	278	7	there	there	EX
cord-022053-idft1p6d	278	8	were	be	VBD
cord-022053-idft1p6d	278	9	only	only	RB
cord-022053-idft1p6d	278	10	eight	eight	CD
cord-022053-idft1p6d	278	11	with	with	IN
cord-022053-idft1p6d	278	12	bacterial	bacterial	JJ
cord-022053-idft1p6d	278	13	pathogens	pathogen	NNS
cord-022053-idft1p6d	279	1	(	(	-LRB-
cord-022053-idft1p6d	279	2	none	none	NN
cord-022053-idft1p6d	279	3	with	with	IN
cord-022053-idft1p6d	279	4	L.	L.	NNP
cord-022053-idft1p6d	279	5	monocytogenes	monocytogenes	NNP
cord-022053-idft1p6d	279	6	or	or	CC
cord-022053-idft1p6d	279	7	N.	N.	NNP
cord-022053-idft1p6d	279	8	meningitides	meningitide	NNS
cord-022053-idft1p6d	279	9	)	)	-RRB-
cord-022053-idft1p6d	279	10	.	.	.
cord-022053-idft1p6d	280	1	Of	of	IN
cord-022053-idft1p6d	280	2	those	those	DT
cord-022053-idft1p6d	280	3	that	that	WDT
cord-022053-idft1p6d	280	4	were	be	VBD
cord-022053-idft1p6d	280	5	present	present	JJ
cord-022053-idft1p6d	280	6	,	,	,
cord-022053-idft1p6d	280	7	the	the	DT
cord-022053-idft1p6d	280	8	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	280	9	ME	ME	NNP
cord-022053-idft1p6d	280	10	panel	panel	NN
cord-022053-idft1p6d	280	11	did	do	VBD
cord-022053-idft1p6d	280	12	not	not	RB
cord-022053-idft1p6d	280	13	identify	identify	VB
cord-022053-idft1p6d	280	14	the	the	DT
cord-022053-idft1p6d	280	15	only	only	JJ
cord-022053-idft1p6d	280	16	S.	S.	NNP
cord-022053-idft1p6d	280	17	agalactiae	agalactiae	NNP
cord-022053-idft1p6d	280	18	.	.	.
cord-022053-idft1p6d	281	1	The	the	DT
cord-022053-idft1p6d	281	2	archived	archived	JJ
cord-022053-idft1p6d	281	3	arm	arm	NN
cord-022053-idft1p6d	281	4	of	of	IN
cord-022053-idft1p6d	281	5	the	the	DT
cord-022053-idft1p6d	281	6	evaluation	evaluation	NN
cord-022053-idft1p6d	281	7	included	include	VBD
cord-022053-idft1p6d	281	8	two	two	CD
cord-022053-idft1p6d	281	9	S.	S.	NNP
cord-022053-idft1p6d	281	10	agalactiae	agalactiae	NN
cord-022053-idft1p6d	281	11	samples	sample	NNS
cord-022053-idft1p6d	281	12	,	,	,
cord-022053-idft1p6d	281	13	both	both	DT
cord-022053-idft1p6d	281	14	of	of	IN
cord-022053-idft1p6d	281	15	which	which	WDT
cord-022053-idft1p6d	281	16	were	be	VBD
cord-022053-idft1p6d	281	17	correctly	correctly	RB
cord-022053-idft1p6d	281	18	identified	identify	VBN
cord-022053-idft1p6d	281	19	.	.	.
cord-022053-idft1p6d	282	1	106	106	CD
cord-022053-idft1p6d	283	1	Since	since	IN
cord-022053-idft1p6d	283	2	FDA	FDA	NNP
cord-022053-idft1p6d	283	3	approval	approval	NN
cord-022053-idft1p6d	283	4	,	,	,
cord-022053-idft1p6d	283	5	one	one	CD
cord-022053-idft1p6d	283	6	US	US	NNP
cord-022053-idft1p6d	283	7	study	study	NN
cord-022053-idft1p6d	283	8	has	have	VBZ
cord-022053-idft1p6d	283	9	been	be	VBN
cord-022053-idft1p6d	283	10	published	publish	VBN
cord-022053-idft1p6d	283	11	on	on	IN
cord-022053-idft1p6d	283	12	the	the	DT
cord-022053-idft1p6d	283	13	performance	performance	NN
cord-022053-idft1p6d	283	14	of	of	IN
cord-022053-idft1p6d	283	15	the	the	DT
cord-022053-idft1p6d	283	16	panel	panel	NN
cord-022053-idft1p6d	283	17	in	in	IN
cord-022053-idft1p6d	283	18	several	several	JJ
cord-022053-idft1p6d	283	19	Texas	Texas	NNP
cord-022053-idft1p6d	283	20	medical	medical	JJ
cord-022053-idft1p6d	283	21	centers	center	NNS
cord-022053-idft1p6d	283	22	.	.	.
cord-022053-idft1p6d	284	1	In	in	IN
cord-022053-idft1p6d	284	2	that	that	DT
cord-022053-idft1p6d	284	3	study	study	NN
cord-022053-idft1p6d	284	4	of	of	IN
cord-022053-idft1p6d	284	5	48	48	CD
cord-022053-idft1p6d	284	6	patients	patient	NNS
cord-022053-idft1p6d	284	7	with	with	IN
cord-022053-idft1p6d	284	8	community	community	NN
cord-022053-idft1p6d	284	9	-	-	HYPH
cord-022053-idft1p6d	284	10	acquired	acquire	VBN
cord-022053-idft1p6d	284	11	meningitis	meningitis	NN
cord-022053-idft1p6d	284	12	and	and	CC
cord-022053-idft1p6d	284	13	a	a	DT
cord-022053-idft1p6d	284	14	negative	negative	JJ
cord-022053-idft1p6d	284	15	Gram	gram	NN
cord-022053-idft1p6d	284	16	stain	stain	NN
cord-022053-idft1p6d	284	17	,	,	,
cord-022053-idft1p6d	284	18	the	the	DT
cord-022053-idft1p6d	284	19	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	284	20	detected	detect	VBD
cord-022053-idft1p6d	284	21	two	two	CD
cord-022053-idft1p6d	284	22	samples	sample	NNS
cord-022053-idft1p6d	284	23	with	with	IN
cord-022053-idft1p6d	284	24	bacterial	bacterial	JJ
cord-022053-idft1p6d	284	25	pathogens	pathogen	NNS
cord-022053-idft1p6d	284	26	,	,	,
cord-022053-idft1p6d	284	27	both	both	CC
cord-022053-idft1p6d	284	28	S.	S.	NNP
cord-022053-idft1p6d	284	29	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	284	30	.	.	.
cord-022053-idft1p6d	285	1	Culture	culture	NN
cord-022053-idft1p6d	285	2	detected	detect	VBD
cord-022053-idft1p6d	285	3	only	only	RB
cord-022053-idft1p6d	285	4	one	one	CD
cord-022053-idft1p6d	285	5	of	of	IN
cord-022053-idft1p6d	285	6	these	these	DT
cord-022053-idft1p6d	285	7	,	,	,
cord-022053-idft1p6d	285	8	although	although	IN
cord-022053-idft1p6d	285	9	the	the	DT
cord-022053-idft1p6d	285	10	other	other	JJ
cord-022053-idft1p6d	285	11	one	one	NN
cord-022053-idft1p6d	285	12	was	be	VBD
cord-022053-idft1p6d	285	13	positive	positive	JJ
cord-022053-idft1p6d	285	14	for	for	IN
cord-022053-idft1p6d	285	15	streptococcal	streptococcal	JJ
cord-022053-idft1p6d	285	16	urinary	urinary	JJ
cord-022053-idft1p6d	285	17	antigen	antigen	NN
cord-022053-idft1p6d	285	18	.	.	.
cord-022053-idft1p6d	286	1	107	107	CD
cord-022053-idft1p6d	286	2	Finally	finally	RB
cord-022053-idft1p6d	286	3	,	,	,
cord-022053-idft1p6d	286	4	the	the	DT
cord-022053-idft1p6d	286	5	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	286	6	blood	blood	NN
cord-022053-idft1p6d	286	7	culture	culture	NN
cord-022053-idft1p6d	286	8	identification	identification	NN
cord-022053-idft1p6d	286	9	(	(	-LRB-
cord-022053-idft1p6d	286	10	BCID	BCID	NNP
cord-022053-idft1p6d	286	11	)	)	-RRB-
cord-022053-idft1p6d	286	12	panel	panel	NN
cord-022053-idft1p6d	286	13	tests	test	NNS
cord-022053-idft1p6d	286	14	for	for	IN
cord-022053-idft1p6d	286	15	an	an	DT
cord-022053-idft1p6d	286	16	array	array	NN
cord-022053-idft1p6d	286	17	of	of	IN
cord-022053-idft1p6d	286	18	19	19	CD
cord-022053-idft1p6d	286	19	bacterial	bacterial	JJ
cord-022053-idft1p6d	286	20	targets	target	NNS
cord-022053-idft1p6d	286	21	,	,	,
cord-022053-idft1p6d	286	22	including	include	VBG
cord-022053-idft1p6d	286	23	:	:	:
cord-022053-idft1p6d	286	24	Enterococcus	Enterococcus	NNP
cord-022053-idft1p6d	286	25	,	,	,
cord-022053-idft1p6d	286	26	L.	L.	NNP
cord-022053-idft1p6d	286	27	monocytogenes	monocytogenes	NNP
cord-022053-idft1p6d	286	28	,	,	,
cord-022053-idft1p6d	286	29	SA	SA	NNP
cord-022053-idft1p6d	286	30	,	,	,
cord-022053-idft1p6d	286	31	Streptococcus	Streptococcus	NNP
cord-022053-idft1p6d	286	32	(	(	-LRB-
cord-022053-idft1p6d	286	33	multiple	multiple	NN
cord-022053-idft1p6d	286	34	)	)	-RRB-
cord-022053-idft1p6d	286	35	,	,	,
cord-022053-idft1p6d	286	36	A.	a.	NN
cord-022053-idft1p6d	286	37	baumannii	baumannii	NNP
cord-022053-idft1p6d	286	38	,	,	,
cord-022053-idft1p6d	286	39	P.	P.	NNP
cord-022053-idft1p6d	286	40	aeruginosa	aeruginosa	NN
cord-022053-idft1p6d	286	41	,	,	,
cord-022053-idft1p6d	286	42	E.	E.	NNP
cord-022053-idft1p6d	286	43	coli	coli	NNS
cord-022053-idft1p6d	286	44	,	,	,
cord-022053-idft1p6d	286	45	and	and	CC
cord-022053-idft1p6d	286	46	K.	K.	NNP
cord-022053-idft1p6d	286	47	pneumoniae	pneumoniae	NNS
cord-022053-idft1p6d	286	48	.	.	.
cord-022053-idft1p6d	287	1	It	-PRON-	PRP
cord-022053-idft1p6d	287	2	also	also	RB
cord-022053-idft1p6d	287	3	tests	test	VBZ
cord-022053-idft1p6d	287	4	for	for	IN
cord-022053-idft1p6d	287	5	five	five	CD
cord-022053-idft1p6d	287	6	species	specie	NNS
cord-022053-idft1p6d	287	7	of	of	IN
cord-022053-idft1p6d	287	8	Candida	Candida	NNP
cord-022053-idft1p6d	287	9	and	and	CC
cord-022053-idft1p6d	287	10	three	three	CD
cord-022053-idft1p6d	287	11	bacterial	bacterial	JJ
cord-022053-idft1p6d	287	12	resistance	resistance	NN
cord-022053-idft1p6d	287	13	genes	gene	NNS
cord-022053-idft1p6d	287	14	:	:	:
cord-022053-idft1p6d	287	15	mecA	mecA	NNP
cord-022053-idft1p6d	287	16	,	,	,
cord-022053-idft1p6d	287	17	vanA	vanA	NNP
cord-022053-idft1p6d	287	18	/	/	SYM
cord-022053-idft1p6d	287	19	B	B	NNP
cord-022053-idft1p6d	287	20	,	,	,
cord-022053-idft1p6d	287	21	and	and	CC
cord-022053-idft1p6d	287	22	kpc	kpc	NN
cord-022053-idft1p6d	287	23	.	.	.
cord-022053-idft1p6d	288	1	It	-PRON-	PRP
cord-022053-idft1p6d	288	2	has	have	VBZ
cord-022053-idft1p6d	288	3	performed	perform	VBN
cord-022053-idft1p6d	288	4	well	well	RB
cord-022053-idft1p6d	288	5	on	on	IN
cord-022053-idft1p6d	288	6	both	both	CC
cord-022053-idft1p6d	288	7	monomicrobial	monomicrobial	JJ
cord-022053-idft1p6d	288	8	and	and	CC
cord-022053-idft1p6d	288	9	polymicrobial	polymicrobial	JJ
cord-022053-idft1p6d	288	10	specimens	specimen	NNS
cord-022053-idft1p6d	288	11	in	in	IN
cord-022053-idft1p6d	288	12	several	several	JJ
cord-022053-idft1p6d	288	13	clinical	clinical	JJ
cord-022053-idft1p6d	288	14	studies	study	NNS
cord-022053-idft1p6d	288	15	.	.	.
cord-022053-idft1p6d	289	1	108	108	CD
cord-022053-idft1p6d	289	2	,	,	,
cord-022053-idft1p6d	289	3	109	109	CD
cord-022053-idft1p6d	289	4	 	 	_SP
cord-022053-idft1p6d	290	1	The	the	DT
cord-022053-idft1p6d	290	2	BD	BD	NNP
cord-022053-idft1p6d	290	3	Max	Max	NNP
cord-022053-idft1p6d	290	4	is	be	VBZ
cord-022053-idft1p6d	290	5	a	a	DT
cord-022053-idft1p6d	290	6	sample	sample	NN
cord-022053-idft1p6d	290	7	-	-	HYPH
cord-022053-idft1p6d	290	8	to	to	IN
cord-022053-idft1p6d	290	9	-	-	HYPH
cord-022053-idft1p6d	290	10	result	result	VB
cord-022053-idft1p6d	290	11	real	real	JJ
cord-022053-idft1p6d	290	12	-	-	HYPH
cord-022053-idft1p6d	290	13	time	time	NN
cord-022053-idft1p6d	290	14	PCR	pcr	NN
cord-022053-idft1p6d	290	15	-	-	HYPH
cord-022053-idft1p6d	290	16	based	base	VBN
cord-022053-idft1p6d	290	17	platform	platform	NN
cord-022053-idft1p6d	290	18	.	.	.
cord-022053-idft1p6d	291	1	Amplicons	amplicon	NNS
cord-022053-idft1p6d	291	2	are	be	VBP
cord-022053-idft1p6d	291	3	detected	detect	VBN
cord-022053-idft1p6d	291	4	via	via	IN
cord-022053-idft1p6d	291	5	fluorescent	fluorescent	JJ
cord-022053-idft1p6d	291	6	probes	probe	NNS
cord-022053-idft1p6d	291	7	.	.	.
cord-022053-idft1p6d	292	1	A	a	DT
cord-022053-idft1p6d	292	2	distinguishing	distinguishing	JJ
cord-022053-idft1p6d	292	3	feature	feature	NN
cord-022053-idft1p6d	292	4	is	be	VBZ
cord-022053-idft1p6d	292	5	the	the	DT
cord-022053-idft1p6d	292	6	capability	capability	NN
cord-022053-idft1p6d	292	7	to	to	TO
cord-022053-idft1p6d	292	8	run	run	VB
cord-022053-idft1p6d	292	9	laboratory	laboratory	NN
cord-022053-idft1p6d	292	10	-	-	HYPH
cord-022053-idft1p6d	292	11	developed	develop	VBN
cord-022053-idft1p6d	292	12	tests	test	NNS
cord-022053-idft1p6d	292	13	alongside	alongside	IN
cord-022053-idft1p6d	292	14	FDA	FDA	NNP
cord-022053-idft1p6d	292	15	-	-	HYPH
cord-022053-idft1p6d	292	16	approved	approve	VBN
cord-022053-idft1p6d	292	17	panels	panel	NNS
cord-022053-idft1p6d	292	18	.	.	.
cord-022053-idft1p6d	293	1	Current	current	JJ
cord-022053-idft1p6d	293	2	FDA	FDA	NNP
cord-022053-idft1p6d	293	3	-	-	HYPH
cord-022053-idft1p6d	293	4	approved	approve	VBN
cord-022053-idft1p6d	293	5	assays	assay	NNS
cord-022053-idft1p6d	293	6	include	include	VBP
cord-022053-idft1p6d	293	7	GBS	GBS	NNP
cord-022053-idft1p6d	293	8	(	(	-LRB-
cord-022053-idft1p6d	293	9	for	for	IN
cord-022053-idft1p6d	293	10	group	group	NN
cord-022053-idft1p6d	293	11	B	B	NNP
cord-022053-idft1p6d	293	12	Streptococci	Streptococci	NNP
cord-022053-idft1p6d	293	13	)	)	-RRB-
cord-022053-idft1p6d	293	14	,	,	,
cord-022053-idft1p6d	293	15	CT	CT	NNP
cord-022053-idft1p6d	293	16	/	/	SYM
cord-022053-idft1p6d	293	17	GC	GC	NNP
cord-022053-idft1p6d	293	18	/	/	SYM
cord-022053-idft1p6d	293	19	TV	TV	NNP
cord-022053-idft1p6d	293	20	(	(	-LRB-
cord-022053-idft1p6d	293	21	for	for	IN
cord-022053-idft1p6d	293	22	vaginitis	vaginitis	NN
cord-022053-idft1p6d	293	23	)	)	-RRB-
cord-022053-idft1p6d	293	24	,	,	,
cord-022053-idft1p6d	293	25	MRSA	MRSA	NNP
cord-022053-idft1p6d	293	26	XT	XT	NNP
cord-022053-idft1p6d	293	27	(	(	-LRB-
cord-022053-idft1p6d	293	28	for	for	IN
cord-022053-idft1p6d	293	29	extended	extended	JJ
cord-022053-idft1p6d	293	30	MRSA	MRSA	NNP
cord-022053-idft1p6d	293	31	coverage	coverage	NN
cord-022053-idft1p6d	293	32	)	)	-RRB-
cord-022053-idft1p6d	293	33	,	,	,
cord-022053-idft1p6d	293	34	Cdiff	Cdiff	NNP
cord-022053-idft1p6d	293	35	(	(	-LRB-
cord-022053-idft1p6d	293	36	for	for	IN
cord-022053-idft1p6d	293	37	C.	C.	NNP
cord-022053-idft1p6d	293	38	difficile	difficile	NNP
cord-022053-idft1p6d	293	39	)	)	-RRB-
cord-022053-idft1p6d	293	40	,	,	,
cord-022053-idft1p6d	293	41	and	and	CC
cord-022053-idft1p6d	293	42	StaffSR	StaffSR	NNP
cord-022053-idft1p6d	293	43	(	(	-LRB-
cord-022053-idft1p6d	293	44	for	for	IN
cord-022053-idft1p6d	293	45	Staphylococcus	Staphylococcus	NNP
cord-022053-idft1p6d	293	46	aureas	aureas	NNP
cord-022053-idft1p6d	293	47	and	and	CC
cord-022053-idft1p6d	293	48	MRSA	MRSA	NNP
cord-022053-idft1p6d	293	49	)	)	-RRB-
cord-022053-idft1p6d	293	50	.	.	.
cord-022053-idft1p6d	294	1	The	the	DT
cord-022053-idft1p6d	294	2	bacterial	bacterial	JJ
cord-022053-idft1p6d	294	3	panel	panel	NN
cord-022053-idft1p6d	294	4	includes	include	VBZ
cord-022053-idft1p6d	294	5	Salmonella	Salmonella	NNP
cord-022053-idft1p6d	294	6	spp	spp	NNP
cord-022053-idft1p6d	294	7	.	.	.
cord-022053-idft1p6d	295	1	,	,	,
cord-022053-idft1p6d	295	2	Campylobacter	Campylobacter	NNP
cord-022053-idft1p6d	295	3	spp	spp	NNS
cord-022053-idft1p6d	295	4	.	.	.
cord-022053-idft1p6d	296	1	(	(	-LRB-
cord-022053-idft1p6d	296	2	jejuni	jejuni	NNP
cord-022053-idft1p6d	296	3	/	/	SYM
cord-022053-idft1p6d	296	4	coli	coli	NNP
cord-022053-idft1p6d	296	5	)	)	-RRB-
cord-022053-idft1p6d	296	6	,	,	,
cord-022053-idft1p6d	296	7	Shigellosis	Shigellosis	NNP
cord-022053-idft1p6d	296	8	disease	disease	NN
cord-022053-idft1p6d	296	9	-	-	HYPH
cord-022053-idft1p6d	296	10	causing	cause	VBG
cord-022053-idft1p6d	296	11	agents	agent	NNS
cord-022053-idft1p6d	296	12	(	(	-LRB-
cord-022053-idft1p6d	296	13	Shigella	Shigella	NNP
cord-022053-idft1p6d	296	14	spp	spp	NNS
cord-022053-idft1p6d	296	15	.	.	.
cord-022053-idft1p6d	297	1	and	and	CC
cord-022053-idft1p6d	297	2	EIEC	EIEC	NNP
cord-022053-idft1p6d	297	3	)	)	-RRB-
cord-022053-idft1p6d	297	4	,	,	,
cord-022053-idft1p6d	297	5	as	as	RB
cord-022053-idft1p6d	297	6	well	well	RB
cord-022053-idft1p6d	297	7	as	as	IN
cord-022053-idft1p6d	298	1	Shiga	Shiga	NNP
cord-022053-idft1p6d	298	2	-	-	HYPH
cord-022053-idft1p6d	298	3	toxin	toxin	NN
cord-022053-idft1p6d	298	4	producing	produce	VBG
cord-022053-idft1p6d	298	5	E.	E.	NNP
cord-022053-idft1p6d	298	6	coli	coli	NNS
cord-022053-idft1p6d	298	7	.	.	.
cord-022053-idft1p6d	299	1	It	-PRON-	PRP
cord-022053-idft1p6d	299	2	has	have	VBZ
cord-022053-idft1p6d	299	3	demonstrated	demonstrate	VBN
cord-022053-idft1p6d	299	4	high	high	JJ
cord-022053-idft1p6d	299	5	sensitivity	sensitivity	NN
cord-022053-idft1p6d	299	6	for	for	IN
cord-022053-idft1p6d	299	7	the	the	DT
cord-022053-idft1p6d	299	8	organisms	organism	NNS
cord-022053-idft1p6d	299	9	in	in	IN
cord-022053-idft1p6d	299	10	its	-PRON-	PRP$
cord-022053-idft1p6d	299	11	library	library	NN
cord-022053-idft1p6d	299	12	in	in	IN
cord-022053-idft1p6d	299	13	several	several	JJ
cord-022053-idft1p6d	299	14	studies	study	NNS
cord-022053-idft1p6d	299	15	.	.	.
cord-022053-idft1p6d	300	1	[	[	-LRB-
cord-022053-idft1p6d	300	2	110	110	CD
cord-022053-idft1p6d	300	3	]	]	-RRB-
cord-022053-idft1p6d	300	4	[	[	-LRB-
cord-022053-idft1p6d	300	5	111	111	CD
cord-022053-idft1p6d	300	6	]	]	-RRB-
cord-022053-idft1p6d	301	1	[	[	-LRB-
cord-022053-idft1p6d	301	2	112	112	CD
cord-022053-idft1p6d	301	3	]	]	-RRB-
cord-022053-idft1p6d	302	1	The	the	DT
cord-022053-idft1p6d	302	2	parasite	parasite	NN
cord-022053-idft1p6d	302	3	panel	panel	NN
cord-022053-idft1p6d	302	4	includes	include	VBZ
cord-022053-idft1p6d	302	5	the	the	DT
cord-022053-idft1p6d	302	6	three	three	CD
cord-022053-idft1p6d	302	7	most	most	RBS
cord-022053-idft1p6d	302	8	common	common	JJ
cord-022053-idft1p6d	302	9	protist	protist	NN
cord-022053-idft1p6d	302	10	parasites	parasite	NNS
cord-022053-idft1p6d	302	11	in	in	IN
cord-022053-idft1p6d	302	12	humans	human	NNS
cord-022053-idft1p6d	302	13	in	in	IN
cord-022053-idft1p6d	302	14	developed	develop	VBN
cord-022053-idft1p6d	302	15	countries	country	NNS
cord-022053-idft1p6d	302	16	,	,	,
cord-022053-idft1p6d	302	17	including	include	VBG
cord-022053-idft1p6d	302	18	Giardia	Giardia	NNP
cord-022053-idft1p6d	302	19	lamblia	lamblia	NNP
cord-022053-idft1p6d	302	20	,	,	,
cord-022053-idft1p6d	302	21	Cryptosporidium	cryptosporidium	NN
cord-022053-idft1p6d	302	22	,	,	,
cord-022053-idft1p6d	302	23	and	and	CC
cord-022053-idft1p6d	302	24	E.	E.	NNP
cord-022053-idft1p6d	302	25	histolytica	histolytica	NNP
cord-022053-idft1p6d	302	26	,	,	,
cord-022053-idft1p6d	302	27	but	but	CC
cord-022053-idft1p6d	302	28	has	have	VBZ
cord-022053-idft1p6d	302	29	the	the	DT
cord-022053-idft1p6d	302	30	difficult	difficult	JJ
cord-022053-idft1p6d	302	31	challenge	challenge	NN
cord-022053-idft1p6d	302	32	of	of	IN
cord-022053-idft1p6d	302	33	very	very	RB
cord-022053-idft1p6d	302	34	low	low	JJ
cord-022053-idft1p6d	302	35	population	population	NN
cord-022053-idft1p6d	302	36	prevalence	prevalence	NN
cord-022053-idft1p6d	302	37	relative	relative	JJ
cord-022053-idft1p6d	302	38	to	to	IN
cord-022053-idft1p6d	302	39	the	the	DT
cord-022053-idft1p6d	302	40	bacterial	bacterial	JJ
cord-022053-idft1p6d	302	41	assays	assay	NNS
cord-022053-idft1p6d	302	42	,	,	,
cord-022053-idft1p6d	302	43	making	make	VBG
cord-022053-idft1p6d	302	44	cost	cost	VB
cord-022053-idft1p6d	302	45	a	a	DT
cord-022053-idft1p6d	302	46	challenge	challenge	NN
cord-022053-idft1p6d	302	47	over	over	IN
cord-022053-idft1p6d	302	48	other	other	JJ
cord-022053-idft1p6d	302	49	methods	method	NNS
cord-022053-idft1p6d	302	50	for	for	IN
cord-022053-idft1p6d	302	51	uptake	uptake	NN
cord-022053-idft1p6d	302	52	.	.	.
cord-022053-idft1p6d	303	1	113	113	CD
cord-022053-idft1p6d	303	2	Verigene	Verigene	NNP
cord-022053-idft1p6d	303	3	is	be	VBZ
cord-022053-idft1p6d	303	4	another	another	DT
cord-022053-idft1p6d	303	5	widely	widely	RB
cord-022053-idft1p6d	303	6	used	use	VBN
cord-022053-idft1p6d	303	7	multiplex	multiplex	NN
cord-022053-idft1p6d	303	8	PCR	PCR	NNP
cord-022053-idft1p6d	303	9	platform	platform	NN
cord-022053-idft1p6d	303	10	incorporating	incorporate	VBG
cord-022053-idft1p6d	303	11	PCR	PCR	NNP
cord-022053-idft1p6d	303	12	of	of	IN
cord-022053-idft1p6d	303	13	multiple	multiple	JJ
cord-022053-idft1p6d	303	14	viral	viral	JJ
cord-022053-idft1p6d	303	15	and	and	CC
cord-022053-idft1p6d	303	16	bacterial	bacterial	JJ
cord-022053-idft1p6d	303	17	targets	target	NNS
cord-022053-idft1p6d	303	18	followed	follow	VBN
cord-022053-idft1p6d	303	19	by	by	IN
cord-022053-idft1p6d	303	20	hybridization	hybridization	NN
cord-022053-idft1p6d	303	21	to	to	IN
cord-022053-idft1p6d	303	22	a	a	DT
cord-022053-idft1p6d	303	23	solid	solid	JJ
cord-022053-idft1p6d	303	24	-	-	HYPH
cord-022053-idft1p6d	303	25	phase	phase	NN
cord-022053-idft1p6d	303	26	microarray	microarray	NN
cord-022053-idft1p6d	303	27	.	.	.
cord-022053-idft1p6d	304	1	Detection	detection	NN
cord-022053-idft1p6d	304	2	occurs	occur	VBZ
cord-022053-idft1p6d	304	3	via	via	IN
cord-022053-idft1p6d	304	4	sandwich	sandwich	NN
cord-022053-idft1p6d	304	5	hybridization	hybridization	NN
cord-022053-idft1p6d	304	6	with	with	IN
cord-022053-idft1p6d	304	7	another	another	DT
cord-022053-idft1p6d	304	8	analyte	analyte	RB
cord-022053-idft1p6d	304	9	-	-	HYPH
cord-022053-idft1p6d	304	10	specific	specific	JJ
cord-022053-idft1p6d	304	11	probe	probe	NN
cord-022053-idft1p6d	304	12	bound	bind	VBN
cord-022053-idft1p6d	304	13	to	to	IN
cord-022053-idft1p6d	304	14	a	a	DT
cord-022053-idft1p6d	304	15	gold	gold	JJ
cord-022053-idft1p6d	304	16	nanoparticle	nanoparticle	NN
cord-022053-idft1p6d	304	17	.	.	.
cord-022053-idft1p6d	305	1	The	the	DT
cord-022053-idft1p6d	305	2	signal	signal	NN
cord-022053-idft1p6d	305	3	is	be	VBZ
cord-022053-idft1p6d	305	4	amplified	amplify	VBN
cord-022053-idft1p6d	305	5	via	via	IN
cord-022053-idft1p6d	305	6	deposition	deposition	NN
cord-022053-idft1p6d	305	7	of	of	IN
cord-022053-idft1p6d	305	8	colloidal	colloidal	JJ
cord-022053-idft1p6d	305	9	silver	silver	NN
cord-022053-idft1p6d	305	10	that	that	WDT
cord-022053-idft1p6d	305	11	is	be	VBZ
cord-022053-idft1p6d	305	12	then	then	RB
cord-022053-idft1p6d	305	13	detected	detect	VBN
cord-022053-idft1p6d	305	14	by	by	IN
cord-022053-idft1p6d	305	15	light	light	JJ
cord-022053-idft1p6d	305	16	diffraction	diffraction	NN
cord-022053-idft1p6d	305	17	.	.	.
cord-022053-idft1p6d	306	1	Verigene	verigene	JJ
cord-022053-idft1p6d	306	2	organisms	organism	NNS
cord-022053-idft1p6d	306	3	per	per	IN
cord-022053-idft1p6d	306	4	milliliter	milliliter	NN
cord-022053-idft1p6d	306	5	.	.	.
cord-022053-idft1p6d	307	1	90	90	CD
cord-022053-idft1p6d	308	1	There	there	EX
cord-022053-idft1p6d	308	2	is	be	VBZ
cord-022053-idft1p6d	308	3	a	a	DT
cord-022053-idft1p6d	308	4	great	great	JJ
cord-022053-idft1p6d	308	5	need	need	NN
cord-022053-idft1p6d	308	6	for	for	IN
cord-022053-idft1p6d	308	7	rapid	rapid	JJ
cord-022053-idft1p6d	308	8	molecular	molecular	JJ
cord-022053-idft1p6d	308	9	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	308	10	in	in	IN
cord-022053-idft1p6d	308	11	this	this	DT
cord-022053-idft1p6d	308	12	area	area	NN
cord-022053-idft1p6d	308	13	.	.	.
cord-022053-idft1p6d	309	1	In	in	IN
cord-022053-idft1p6d	309	2	anatomic	anatomic	JJ
cord-022053-idft1p6d	309	3	pathology	pathology	NN
cord-022053-idft1p6d	309	4	,	,	,
cord-022053-idft1p6d	309	5	sample	sample	NN
cord-022053-idft1p6d	309	6	with	with	IN
cord-022053-idft1p6d	309	7	culture	culture	NN
cord-022053-idft1p6d	309	8	and/or	and/or	CC
cord-022053-idft1p6d	309	9	morphology	morphology	NN
cord-022053-idft1p6d	309	10	with	with	IN
cord-022053-idft1p6d	309	11	special	special	JJ
cord-022053-idft1p6d	309	12	stains	stain	NNS
cord-022053-idft1p6d	309	13	and/or	and/or	CC
cord-022053-idft1p6d	309	14	IHC	IHC	NNP
cord-022053-idft1p6d	309	15	can	can	MD
cord-022053-idft1p6d	309	16	resolve	resolve	VB
cord-022053-idft1p6d	309	17	many	many	JJ
cord-022053-idft1p6d	309	18	of	of	IN
cord-022053-idft1p6d	309	19	these	these	DT
cord-022053-idft1p6d	309	20	infections	infection	NNS
cord-022053-idft1p6d	309	21	;	;	:
cord-022053-idft1p6d	309	22	however	however	RB
cord-022053-idft1p6d	309	23	,	,	,
cord-022053-idft1p6d	309	24	optimal	optimal	JJ
cord-022053-idft1p6d	309	25	patient	patient	NN
cord-022053-idft1p6d	309	26	care	care	NN
cord-022053-idft1p6d	309	27	and	and	CC
cord-022053-idft1p6d	309	28	best	good	JJS
cord-022053-idft1p6d	309	29	outcomes	outcome	NNS
cord-022053-idft1p6d	309	30	occur	occur	VBP
cord-022053-idft1p6d	309	31	in	in	IN
cord-022053-idft1p6d	309	32	those	those	DT
cord-022053-idft1p6d	309	33	patients	patient	NNS
cord-022053-idft1p6d	309	34	who	who	WP
cord-022053-idft1p6d	309	35	can	can	MD
cord-022053-idft1p6d	309	36	be	be	VB
cord-022053-idft1p6d	309	37	diagnosed	diagnose	VBN
cord-022053-idft1p6d	309	38	early	early	RB
cord-022053-idft1p6d	309	39	with	with	IN
cord-022053-idft1p6d	309	40	these	these	DT
cord-022053-idft1p6d	309	41	panels	panel	NNS
cord-022053-idft1p6d	309	42	and	and	CC
cord-022053-idft1p6d	309	43	not	not	RB
cord-022053-idft1p6d	309	44	require	require	VB
cord-022053-idft1p6d	309	45	an	an	DT
cord-022053-idft1p6d	309	46	invasive	invasive	JJ
cord-022053-idft1p6d	309	47	biopsy	biopsy	NN
cord-022053-idft1p6d	309	48	.	.	.
cord-022053-idft1p6d	310	1	Sepsis	sepsis	NN
cord-022053-idft1p6d	310	2	continues	continue	VBZ
cord-022053-idft1p6d	310	3	to	to	TO
cord-022053-idft1p6d	310	4	be	be	VB
cord-022053-idft1p6d	310	5	a	a	DT
cord-022053-idft1p6d	310	6	tremendous	tremendous	JJ
cord-022053-idft1p6d	310	7	cause	cause	NN
cord-022053-idft1p6d	310	8	of	of	IN
cord-022053-idft1p6d	310	9	mortality	mortality	NN
cord-022053-idft1p6d	310	10	,	,	,
cord-022053-idft1p6d	310	11	ranking	rank	VBG
cord-022053-idft1p6d	310	12	as	as	IN
cord-022053-idft1p6d	310	13	one	one	CD
cord-022053-idft1p6d	310	14	of	of	IN
cord-022053-idft1p6d	310	15	the	the	DT
cord-022053-idft1p6d	310	16	top	top	JJ
cord-022053-idft1p6d	310	17	10	10	CD
cord-022053-idft1p6d	310	18	causes	cause	NNS
cord-022053-idft1p6d	310	19	of	of	IN
cord-022053-idft1p6d	310	20	death	death	NN
cord-022053-idft1p6d	310	21	in	in	IN
cord-022053-idft1p6d	310	22	the	the	DT
cord-022053-idft1p6d	310	23	United	United	NNP
cord-022053-idft1p6d	310	24	States	States	NNP
cord-022053-idft1p6d	310	25	.	.	.
cord-022053-idft1p6d	311	1	93	93	CD
cord-022053-idft1p6d	312	1	Organisms	organism	NNS
cord-022053-idft1p6d	312	2	commonly	commonly	RB
cord-022053-idft1p6d	312	3	associated	associate	VBN
cord-022053-idft1p6d	312	4	with	with	IN
cord-022053-idft1p6d	312	5	bloodstream	bloodstream	NN
cord-022053-idft1p6d	312	6	infections	infection	NNS
cord-022053-idft1p6d	312	7	include	include	VBP
cord-022053-idft1p6d	312	8	SA	SA	NNP
cord-022053-idft1p6d	312	9	,	,	,
cord-022053-idft1p6d	312	10	E.	E.	NNP
cord-022053-idft1p6d	312	11	coli	coli	NNS
cord-022053-idft1p6d	312	12	,	,	,
cord-022053-idft1p6d	313	1	Enterococcus	Enterococcus	NNP
cord-022053-idft1p6d	313	2	spp	spp	NNP
cord-022053-idft1p6d	313	3	.	.	.
cord-022053-idft1p6d	314	1	,	,	,
cord-022053-idft1p6d	314	2	K.	K.	NNP
cord-022053-idft1p6d	314	3	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	314	4	,	,	,
cord-022053-idft1p6d	314	5	CNS	CNS	NNP
cord-022053-idft1p6d	314	6	,	,	,
cord-022053-idft1p6d	314	7	P.	P.	NNP
cord-022053-idft1p6d	314	8	aeruginosa	aeruginosa	NN
cord-022053-idft1p6d	314	9	,	,	,
cord-022053-idft1p6d	314	10	Candida	Candida	NNP
cord-022053-idft1p6d	314	11	albicans	albican	NNS
cord-022053-idft1p6d	314	12	,	,	,
cord-022053-idft1p6d	314	13	E.	E.	NNP
cord-022053-idft1p6d	314	14	cloacae	cloacae	NN
cord-022053-idft1p6d	314	15	,	,	,
cord-022053-idft1p6d	314	16	and	and	CC
cord-022053-idft1p6d	314	17	Serratia	Serratia	NNP
cord-022053-idft1p6d	314	18	marcescens	marcescen	NNS
cord-022053-idft1p6d	314	19	.	.	.
cord-022053-idft1p6d	314	20	94	94	CD
cord-022053-idft1p6d	315	1	The	the	DT
cord-022053-idft1p6d	315	2	current	current	JJ
cord-022053-idft1p6d	315	3	gold	gold	NN
cord-022053-idft1p6d	315	4	standard	standard	NN
cord-022053-idft1p6d	315	5	for	for	IN
cord-022053-idft1p6d	315	6	diagnosis	diagnosis	NN
cord-022053-idft1p6d	315	7	is	be	VBZ
cord-022053-idft1p6d	315	8	culture	culture	NN
cord-022053-idft1p6d	315	9	,	,	,
cord-022053-idft1p6d	315	10	with	with	IN
cord-022053-idft1p6d	315	11	several	several	JJ
cord-022053-idft1p6d	315	12	automated	automate	VBN
cord-022053-idft1p6d	315	13	systems	system	NNS
cord-022053-idft1p6d	315	14	(	(	-LRB-
cord-022053-idft1p6d	315	15	such	such	JJ
cord-022053-idft1p6d	315	16	as	as	IN
cord-022053-idft1p6d	315	17	the	the	DT
cord-022053-idft1p6d	315	18	BacT	BacT	NNP
cord-022053-idft1p6d	315	19	/	/	SYM
cord-022053-idft1p6d	315	20	Alert	Alert	NNP
cord-022053-idft1p6d	315	21	[	[	-LRB-
cord-022053-idft1p6d	315	22	BioMérieux	BioMérieux	NNP
cord-022053-idft1p6d	315	23	Inc.	Inc.	NNP
cord-022053-idft1p6d	315	24	]	]	-RRB-
cord-022053-idft1p6d	315	25	)	)	-RRB-
cord-022053-idft1p6d	315	26	available	available	JJ
cord-022053-idft1p6d	315	27	to	to	IN
cord-022053-idft1p6d	315	28	clinical	clinical	JJ
cord-022053-idft1p6d	315	29	laboratories	laboratory	NNS
cord-022053-idft1p6d	315	30	.	.	.
cord-022053-idft1p6d	316	1	95	95	CD
cord-022053-idft1p6d	317	1	Although	although	IN
cord-022053-idft1p6d	317	2	these	these	DT
cord-022053-idft1p6d	317	3	systems	system	NNS
cord-022053-idft1p6d	317	4	are	be	VBP
cord-022053-idft1p6d	317	5	quite	quite	RB
cord-022053-idft1p6d	317	6	sensitive	sensitive	JJ
cord-022053-idft1p6d	317	7	,	,	,
cord-022053-idft1p6d	317	8	approximately	approximately	RB
cord-022053-idft1p6d	317	9	only	only	RB
cord-022053-idft1p6d	317	10	one	one	CD
cord-022053-idft1p6d	317	11	-	-	HYPH
cord-022053-idft1p6d	317	12	third	third	NN
cord-022053-idft1p6d	317	13	of	of	IN
cord-022053-idft1p6d	317	14	patients	patient	NNS
cord-022053-idft1p6d	317	15	with	with	IN
cord-022053-idft1p6d	317	16	sepsis	sepsis	NN
cord-022053-idft1p6d	317	17	have	have	VBP
cord-022053-idft1p6d	317	18	positive	positive	JJ
cord-022053-idft1p6d	317	19	cultures	culture	NNS
cord-022053-idft1p6d	317	20	.	.	.
cord-022053-idft1p6d	318	1	96	96	CD
cord-022053-idft1p6d	318	2	Some	some	DT
cord-022053-idft1p6d	318	3	of	of	IN
cord-022053-idft1p6d	318	4	this	this	DT
cord-022053-idft1p6d	318	5	lack	lack	NN
cord-022053-idft1p6d	318	6	of	of	IN
cord-022053-idft1p6d	318	7	sensitivity	sensitivity	NN
cord-022053-idft1p6d	318	8	may	may	MD
cord-022053-idft1p6d	318	9	be	be	VB
cord-022053-idft1p6d	318	10	due	due	JJ
cord-022053-idft1p6d	318	11	to	to	IN
cord-022053-idft1p6d	318	12	pretreatment	pretreatment	NN
cord-022053-idft1p6d	318	13	with	with	IN
cord-022053-idft1p6d	318	14	antibiotics	antibiotic	NNS
cord-022053-idft1p6d	318	15	,	,	,
cord-022053-idft1p6d	318	16	and	and	CC
cord-022053-idft1p6d	318	17	some	some	DT
cord-022053-idft1p6d	318	18	of	of	IN
cord-022053-idft1p6d	318	19	it	-PRON-	PRP
cord-022053-idft1p6d	318	20	may	may	MD
cord-022053-idft1p6d	318	21	be	be	VB
cord-022053-idft1p6d	318	22	due	due	JJ
cord-022053-idft1p6d	318	23	to	to	IN
cord-022053-idft1p6d	318	24	the	the	DT
cord-022053-idft1p6d	318	25	low	low	JJ
cord-022053-idft1p6d	318	26	numbers	number	NNS
cord-022053-idft1p6d	318	27	of	of	IN
cord-022053-idft1p6d	318	28	organisms	organism	NNS
cord-022053-idft1p6d	318	29	present	present	JJ
cord-022053-idft1p6d	318	30	in	in	IN
cord-022053-idft1p6d	318	31	many	many	JJ
cord-022053-idft1p6d	318	32	clinically	clinically	RB
cord-022053-idft1p6d	318	33	significant	significant	JJ
cord-022053-idft1p6d	318	34	bacteremias	bacteremia	NNS
cord-022053-idft1p6d	318	35	.	.	.
cord-022053-idft1p6d	319	1	97	97	CD
cord-022053-idft1p6d	320	1	In	in	IN
cord-022053-idft1p6d	320	2	addition	addition	NN
cord-022053-idft1p6d	320	3	to	to	IN
cord-022053-idft1p6d	320	4	sensitivity	sensitivity	NN
cord-022053-idft1p6d	320	5	,	,	,
cord-022053-idft1p6d	320	6	speed	speed	NN
cord-022053-idft1p6d	320	7	is	be	VBZ
cord-022053-idft1p6d	320	8	also	also	RB
cord-022053-idft1p6d	320	9	a	a	DT
cord-022053-idft1p6d	320	10	major	major	JJ
cord-022053-idft1p6d	320	11	issue	issue	NN
cord-022053-idft1p6d	320	12	.	.	.
cord-022053-idft1p6d	321	1	The	the	DT
cord-022053-idft1p6d	321	2	rapid	rapid	JJ
cord-022053-idft1p6d	321	3	diagnosis	diagnosis	NN
cord-022053-idft1p6d	321	4	of	of	IN
cord-022053-idft1p6d	321	5	bloodstream	bloodstream	NN
cord-022053-idft1p6d	321	6	infections	infection	NNS
cord-022053-idft1p6d	321	7	is	be	VBZ
cord-022053-idft1p6d	321	8	critical	critical	JJ
cord-022053-idft1p6d	321	9	for	for	IN
cord-022053-idft1p6d	321	10	patient	patient	JJ
cord-022053-idft1p6d	321	11	outcomes	outcome	NNS
cord-022053-idft1p6d	321	12	,	,	,
cord-022053-idft1p6d	321	13	with	with	IN
cord-022053-idft1p6d	321	14	estimates	estimate	NNS
cord-022053-idft1p6d	321	15	of	of	IN
cord-022053-idft1p6d	321	16	a	a	DT
cord-022053-idft1p6d	321	17	7.6	7.6	CD
cord-022053-idft1p6d	321	18	%	%	NN
cord-022053-idft1p6d	321	19	decrease	decrease	NN
cord-022053-idft1p6d	321	20	in	in	IN
cord-022053-idft1p6d	321	21	survival	survival	NN
cord-022053-idft1p6d	321	22	for	for	IN
cord-022053-idft1p6d	321	23	every	every	DT
cord-022053-idft1p6d	321	24	hour	hour	NN
cord-022053-idft1p6d	321	25	that	that	WDT
cord-022053-idft1p6d	321	26	appropriate	appropriate	JJ
cord-022053-idft1p6d	321	27	antimicrobials	antimicrobial	NNS
cord-022053-idft1p6d	321	28	are	be	VBP
cord-022053-idft1p6d	321	29	delayed	delay	VBN
cord-022053-idft1p6d	321	30	after	after	IN
cord-022053-idft1p6d	321	31	the	the	DT
cord-022053-idft1p6d	321	32	onset	onset	NN
cord-022053-idft1p6d	321	33	of	of	IN
cord-022053-idft1p6d	321	34	hypotension	hypotension	NN
cord-022053-idft1p6d	321	35	.	.	.
cord-022053-idft1p6d	322	1	98	98	CD
cord-022053-idft1p6d	323	1	The	the	DT
cord-022053-idft1p6d	323	2	need	need	NN
cord-022053-idft1p6d	323	3	for	for	IN
cord-022053-idft1p6d	323	4	sensitive	sensitive	JJ
cord-022053-idft1p6d	323	5	,	,	,
cord-022053-idft1p6d	323	6	fast	fast	JJ
cord-022053-idft1p6d	323	7	detection	detection	NN
cord-022053-idft1p6d	323	8	,	,	,
cord-022053-idft1p6d	323	9	ideally	ideally	RB
cord-022053-idft1p6d	323	10	accompanied	accompany	VBN
cord-022053-idft1p6d	323	11	by	by	IN
cord-022053-idft1p6d	323	12	some	some	DT
cord-022053-idft1p6d	323	13	assessment	assessment	NN
cord-022053-idft1p6d	323	14	of	of	IN
cord-022053-idft1p6d	323	15	antibiotic	antibiotic	JJ
cord-022053-idft1p6d	323	16	resistance	resistance	NN
cord-022053-idft1p6d	323	17	determinants	determinant	NNS
cord-022053-idft1p6d	323	18	,	,	,
cord-022053-idft1p6d	323	19	has	have	VBZ
cord-022053-idft1p6d	323	20	inspired	inspire	VBN
cord-022053-idft1p6d	323	21	a	a	DT
cord-022053-idft1p6d	323	22	number	number	NN
cord-022053-idft1p6d	323	23	of	of	IN
cord-022053-idft1p6d	323	24	new	new	JJ
cord-022053-idft1p6d	323	25	technologies	technology	NNS
cord-022053-idft1p6d	323	26	geared	gear	VBN
cord-022053-idft1p6d	323	27	towards	towards	IN
cord-022053-idft1p6d	323	28	improved	improved	JJ
cord-022053-idft1p6d	323	29	speed	speed	NN
cord-022053-idft1p6d	323	30	and	and	CC
cord-022053-idft1p6d	323	31	sensitivity	sensitivity	NN
cord-022053-idft1p6d	323	32	of	of	IN
cord-022053-idft1p6d	323	33	blood	blood	NN
cord-022053-idft1p6d	323	34	culture	culture	NN
cord-022053-idft1p6d	323	35	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	323	36	.	.	.
cord-022053-idft1p6d	324	1	Several	several	JJ
cord-022053-idft1p6d	324	2	of	of	IN
cord-022053-idft1p6d	324	3	these	these	DT
cord-022053-idft1p6d	324	4	have	have	VBP
cord-022053-idft1p6d	324	5	been	be	VBN
cord-022053-idft1p6d	324	6	reviewed	review	VBN
cord-022053-idft1p6d	324	7	.	.	.
cord-022053-idft1p6d	325	1	[	[	-LRB-
cord-022053-idft1p6d	325	2	99	99	CD
cord-022053-idft1p6d	325	3	]	]	-RRB-
cord-022053-idft1p6d	325	4	[	[	-LRB-
cord-022053-idft1p6d	325	5	100	100	CD
cord-022053-idft1p6d	325	6	]	]	-RRB-
cord-022053-idft1p6d	325	7	[	[	-LRB-
cord-022053-idft1p6d	325	8	101	101	CD
cord-022053-idft1p6d	325	9	]	]	-RRB-
cord-022053-idft1p6d	326	1	Platforms	platform	NNS
cord-022053-idft1p6d	326	2	and	and	CC
cord-022053-idft1p6d	326	3	Technologies	Technologies	NNPS
cord-022053-idft1p6d	326	4	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	326	5	(	(	-LRB-
cord-022053-idft1p6d	326	6	BioFire	BioFire	NNP
cord-022053-idft1p6d	326	7	/	/	SYM
cord-022053-idft1p6d	326	8	BioMérieux	BioMérieux	NNP
cord-022053-idft1p6d	326	9	)	)	-RRB-
cord-022053-idft1p6d	327	1	The	the	DT
cord-022053-idft1p6d	327	2	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	327	3	system	system	NN
cord-022053-idft1p6d	327	4	consists	consist	VBZ
cord-022053-idft1p6d	327	5	of	of	IN
cord-022053-idft1p6d	327	6	nested	nest	VBN
cord-022053-idft1p6d	327	7	PCR	PCR	NNP
cord-022053-idft1p6d	327	8	followed	follow	VBN
cord-022053-idft1p6d	327	9	by	by	IN
cord-022053-idft1p6d	327	10	highresolution	highresolution	NNP
cord-022053-idft1p6d	327	11	melt	melt	VB
cord-022053-idft1p6d	327	12	curve	curve	NN
cord-022053-idft1p6d	327	13	analysis	analysis	NN
cord-022053-idft1p6d	327	14	.	.	.
cord-022053-idft1p6d	328	1	102	102	CD
cord-022053-idft1p6d	328	2	All	all	DT
cord-022053-idft1p6d	328	3	steps	step	NNS
cord-022053-idft1p6d	328	4	of	of	IN
cord-022053-idft1p6d	328	5	the	the	DT
cord-022053-idft1p6d	328	6	assay	assay	NN
cord-022053-idft1p6d	328	7	,	,	,
cord-022053-idft1p6d	328	8	from	from	IN
cord-022053-idft1p6d	328	9	cell	cell	NN
cord-022053-idft1p6d	328	10	lysis	lysis	NN
cord-022053-idft1p6d	328	11	to	to	IN
cord-022053-idft1p6d	328	12	the	the	DT
cord-022053-idft1p6d	328	13	final	final	JJ
cord-022053-idft1p6d	328	14	analysis	analysis	NN
cord-022053-idft1p6d	328	15	,	,	,
cord-022053-idft1p6d	328	16	take	take	VB
cord-022053-idft1p6d	328	17	place	place	NN
cord-022053-idft1p6d	328	18	within	within	IN
cord-022053-idft1p6d	328	19	a	a	DT
cord-022053-idft1p6d	328	20	pouch	pouch	NN
cord-022053-idft1p6d	328	21	containing	contain	VBG
cord-022053-idft1p6d	328	22	freeze	freeze	NN
cord-022053-idft1p6d	328	23	-	-	HYPH
cord-022053-idft1p6d	328	24	dried	dry	VBN
cord-022053-idft1p6d	328	25	reagents	reagent	NNS
cord-022053-idft1p6d	328	26	that	that	WDT
cord-022053-idft1p6d	328	27	can	can	MD
cord-022053-idft1p6d	328	28	be	be	VB
cord-022053-idft1p6d	328	29	stored	store	VBN
cord-022053-idft1p6d	328	30	at	at	IN
cord-022053-idft1p6d	328	31	room	room	NN
cord-022053-idft1p6d	328	32	temperature	temperature	NN
cord-022053-idft1p6d	328	33	.	.	.
cord-022053-idft1p6d	329	1	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	329	2	has	have	VBZ
cord-022053-idft1p6d	329	3	a	a	DT
cord-022053-idft1p6d	329	4	short	short	JJ
cord-022053-idft1p6d	329	5	TAT	tat	NN
cord-022053-idft1p6d	329	6	of	of	IN
cord-022053-idft1p6d	329	7	approximately	approximately	RB
cord-022053-idft1p6d	329	8	1	1	CD
cord-022053-idft1p6d	329	9	hour	hour	NN
cord-022053-idft1p6d	329	10	.	.	.
cord-022053-idft1p6d	330	1	Disadvantages	disadvantage	NNS
cord-022053-idft1p6d	330	2	of	of	IN
cord-022053-idft1p6d	330	3	the	the	DT
cord-022053-idft1p6d	330	4	system	system	NN
cord-022053-idft1p6d	330	5	include	include	VBP
cord-022053-idft1p6d	330	6	the	the	DT
cord-022053-idft1p6d	330	7	relatively	relatively	RB
cord-022053-idft1p6d	330	8	high	high	JJ
cord-022053-idft1p6d	330	9	price	price	NN
cord-022053-idft1p6d	330	10	of	of	IN
cord-022053-idft1p6d	330	11	the	the	DT
cord-022053-idft1p6d	330	12	pouches	pouch	NNS
cord-022053-idft1p6d	330	13	and	and	CC
cord-022053-idft1p6d	330	14	restriction	restriction	NN
cord-022053-idft1p6d	330	15	of	of	IN
cord-022053-idft1p6d	330	16	the	the	DT
cord-022053-idft1p6d	330	17	platform	platform	NN
cord-022053-idft1p6d	330	18	to	to	IN
cord-022053-idft1p6d	330	19	one	one	CD
cord-022053-idft1p6d	330	20	test	test	NN
cord-022053-idft1p6d	330	21	at	at	IN
cord-022053-idft1p6d	330	22	a	a	DT
cord-022053-idft1p6d	330	23	time	time	NN
cord-022053-idft1p6d	330	24	.	.	.
cord-022053-idft1p6d	331	1	Laboratories	laboratory	NNS
cord-022053-idft1p6d	331	2	must	must	MD
cord-022053-idft1p6d	331	3	purchase	purchase	VB
cord-022053-idft1p6d	331	4	multiple	multiple	JJ
cord-022053-idft1p6d	331	5	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	331	6	platforms	platform	NNS
cord-022053-idft1p6d	331	7	if	if	IN
cord-022053-idft1p6d	331	8	they	-PRON-	PRP
cord-022053-idft1p6d	331	9	desire	desire	VBP
cord-022053-idft1p6d	331	10	to	to	TO
cord-022053-idft1p6d	331	11	run	run	VB
cord-022053-idft1p6d	331	12	tests	test	NNS
cord-022053-idft1p6d	331	13	in	in	IN
cord-022053-idft1p6d	331	14	parallel	parallel	NN
cord-022053-idft1p6d	331	15	.	.	.
cord-022053-idft1p6d	332	1	The	the	DT
cord-022053-idft1p6d	332	2	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	332	3	panel	panel	NN
cord-022053-idft1p6d	332	4	was	be	VBD
cord-022053-idft1p6d	332	5	the	the	DT
cord-022053-idft1p6d	332	6	first	first	JJ
cord-022053-idft1p6d	332	7	FDA	FDA	NNP
cord-022053-idft1p6d	332	8	-	-	HYPH
cord-022053-idft1p6d	332	9	approved	approve	VBN
cord-022053-idft1p6d	332	10	RP	RP	NNP
cord-022053-idft1p6d	332	11	to	to	TO
cord-022053-idft1p6d	332	12	include	include	VB
cord-022053-idft1p6d	332	13	bacterial	bacterial	JJ
cord-022053-idft1p6d	332	14	pathogens	pathogen	NNS
cord-022053-idft1p6d	332	15	,	,	,
cord-022053-idft1p6d	332	16	covering	cover	VBG
cord-022053-idft1p6d	332	17	B.	B.	NNP
cord-022053-idft1p6d	332	18	pertussis	pertussis	NN
cord-022053-idft1p6d	332	19	,	,	,
cord-022053-idft1p6d	332	20	C.	C.	NNP
cord-022053-idft1p6d	332	21	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	332	22	,	,	,
cord-022053-idft1p6d	332	23	and	and	CC
cord-022053-idft1p6d	332	24	M.	M.	NNP
cord-022053-idft1p6d	332	25	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	332	26	,	,	,
cord-022053-idft1p6d	332	27	along	along	IN
cord-022053-idft1p6d	332	28	with	with	IN
cord-022053-idft1p6d	332	29	18	18	CD
cord-022053-idft1p6d	332	30	common	common	JJ
cord-022053-idft1p6d	332	31	respiratory	respiratory	JJ
cord-022053-idft1p6d	332	32	viruses	virus	NNS
cord-022053-idft1p6d	332	33	.	.	.
cord-022053-idft1p6d	333	1	102	102	CD
cord-022053-idft1p6d	334	1	For	for	IN
cord-022053-idft1p6d	334	2	GI	GI	NNP
cord-022053-idft1p6d	334	3	testing	testing	NN
cord-022053-idft1p6d	334	4	,	,	,
cord-022053-idft1p6d	334	5	the	the	DT
cord-022053-idft1p6d	334	6	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	334	7	is	be	VBZ
cord-022053-idft1p6d	334	8	the	the	DT
cord-022053-idft1p6d	334	9	most	most	RBS
cord-022053-idft1p6d	334	10	comprehensive	comprehensive	JJ
cord-022053-idft1p6d	334	11	of	of	IN
cord-022053-idft1p6d	334	12	the	the	DT
cord-022053-idft1p6d	334	13	current	current	JJ
cord-022053-idft1p6d	334	14	FDA	FDA	NNP
cord-022053-idft1p6d	334	15	-	-	HYPH
cord-022053-idft1p6d	334	16	approved	approve	VBN
cord-022053-idft1p6d	334	17	panels	panel	NNS
cord-022053-idft1p6d	334	18	,	,	,
cord-022053-idft1p6d	334	19	covering	cover	VBG
cord-022053-idft1p6d	334	20	an	an	DT
cord-022053-idft1p6d	334	21	array	array	NN
cord-022053-idft1p6d	334	22	of	of	IN
cord-022053-idft1p6d	334	23	22	22	CD
cord-022053-idft1p6d	334	24	bacteria	bacteria	NNS
cord-022053-idft1p6d	334	25	,	,	,
cord-022053-idft1p6d	334	26	viral	viral	JJ
cord-022053-idft1p6d	334	27	,	,	,
cord-022053-idft1p6d	334	28	and	and	CC
cord-022053-idft1p6d	334	29	parasitic	parasitic	JJ
cord-022053-idft1p6d	334	30	targets	target	NNS
cord-022053-idft1p6d	334	31	,	,	,
cord-022053-idft1p6d	334	32	including	include	VBG
cord-022053-idft1p6d	334	33	the	the	DT
cord-022053-idft1p6d	334	34	common	common	JJ
cord-022053-idft1p6d	334	35	agents	agent	NNS
cord-022053-idft1p6d	334	36	listed	list	VBN
cord-022053-idft1p6d	334	37	above	above	RB
cord-022053-idft1p6d	334	38	,	,	,
cord-022053-idft1p6d	334	39	as	as	RB
cord-022053-idft1p6d	334	40	well	well	RB
cord-022053-idft1p6d	334	41	as	as	IN
cord-022053-idft1p6d	334	42	Plesiomonas	Plesiomonas	NNP
cord-022053-idft1p6d	334	43	shigelloides	shigelloide	NNS
cord-022053-idft1p6d	334	44	,	,	,
cord-022053-idft1p6d	334	45	Yersinia	Yersinia	NNP
cord-022053-idft1p6d	334	46	enterocolitica	enterocolitica	NNP
cord-022053-idft1p6d	334	47	,	,	,
cord-022053-idft1p6d	334	48	and	and	CC
cord-022053-idft1p6d	334	49	several	several	JJ
cord-022053-idft1p6d	334	50	species	specie	NNS
cord-022053-idft1p6d	334	51	of	of	IN
cord-022053-idft1p6d	334	52	Vibrio	vibrio	NN
cord-022053-idft1p6d	334	53	.	.	.
cord-022053-idft1p6d	335	1	It	-PRON-	PRP
cord-022053-idft1p6d	335	2	can	can	MD
cord-022053-idft1p6d	335	3	also	also	RB
cord-022053-idft1p6d	335	4	differentiate	differentiate	VB
cord-022053-idft1p6d	335	5	between	between	IN
cord-022053-idft1p6d	335	6	enteroaggregative	enteroaggregative	NNP
cord-022053-idft1p6d	335	7	,	,	,
cord-022053-idft1p6d	335	8	enteropathogenic	enteropathogenic	NNP
cord-022053-idft1p6d	335	9	,	,	,
cord-022053-idft1p6d	335	10	enterotoxigenic	enterotoxigenic	NNP
cord-022053-idft1p6d	335	11	,	,	,
cord-022053-idft1p6d	335	12	Shiga	Shiga	NNP
cord-022053-idft1p6d	335	13	toxin	toxin	NN
cord-022053-idft1p6d	335	14	-	-	HYPH
cord-022053-idft1p6d	335	15	producing	produce	VBG
cord-022053-idft1p6d	335	16	,	,	,
cord-022053-idft1p6d	335	17	and	and	CC
cord-022053-idft1p6d	335	18	enteroinvasive	enteroinvasive	JJ
cord-022053-idft1p6d	335	19	E.	E.	NNP
cord-022053-idft1p6d	335	20	coli	coli	NNS
cord-022053-idft1p6d	335	21	(	(	-LRB-
cord-022053-idft1p6d	335	22	EIEC	EIEC	NNP
cord-022053-idft1p6d	335	23	)	)	-RRB-
cord-022053-idft1p6d	335	24	.	.	.
cord-022053-idft1p6d	336	1	Studies	study	NNS
cord-022053-idft1p6d	336	2	have	have	VBP
cord-022053-idft1p6d	336	3	shown	show	VBN
cord-022053-idft1p6d	336	4	a	a	DT
cord-022053-idft1p6d	336	5	sensitivity	sensitivity	NN
cord-022053-idft1p6d	336	6	of	of	IN
cord-022053-idft1p6d	336	7	95.9	95.9	CD
cord-022053-idft1p6d	336	8	%	%	NN
cord-022053-idft1p6d	336	9	to	to	IN
cord-022053-idft1p6d	336	10	100	100	CD
cord-022053-idft1p6d	336	11	%	%	NN
cord-022053-idft1p6d	336	12	and	and	CC
cord-022053-idft1p6d	336	13	a	a	DT
cord-022053-idft1p6d	336	14	specificity	specificity	NN
cord-022053-idft1p6d	336	15	of	of	IN
cord-022053-idft1p6d	336	16	96.6	96.6	CD
cord-022053-idft1p6d	336	17	%	%	NN
cord-022053-idft1p6d	336	18	to	to	TO
cord-022053-idft1p6d	336	19	100	100	CD
cord-022053-idft1p6d	336	20	%	%	NN
cord-022053-idft1p6d	336	21	for	for	IN
cord-022053-idft1p6d	336	22	bacterial	bacterial	JJ
cord-022053-idft1p6d	336	23	pathogens	pathogen	NNS
cord-022053-idft1p6d	336	24	.	.	.
cord-022053-idft1p6d	337	1	103	103	CD
cord-022053-idft1p6d	337	2	,	,	,
cord-022053-idft1p6d	337	3	104	104	CD
cord-022053-idft1p6d	337	4	In	in	IN
cord-022053-idft1p6d	337	5	many	many	JJ
cord-022053-idft1p6d	337	6	cases	case	NNS
cord-022053-idft1p6d	337	7	the	the	DT
cord-022053-idft1p6d	337	8	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	337	9	detected	detect	VBD
cord-022053-idft1p6d	337	10	pathogens	pathogen	NNS
cord-022053-idft1p6d	337	11	in	in	IN
cord-022053-idft1p6d	337	12	samples	sample	NNS
cord-022053-idft1p6d	337	13	that	that	WDT
cord-022053-idft1p6d	337	14	were	be	VBD
cord-022053-idft1p6d	337	15	negative	negative	JJ
cord-022053-idft1p6d	337	16	and	and	CC
cord-022053-idft1p6d	337	17	was	be	VBD
cord-022053-idft1p6d	337	18	far	far	RB
cord-022053-idft1p6d	337	19	more	more	RBR
cord-022053-idft1p6d	337	20	likely	likely	JJ
cord-022053-idft1p6d	337	21	to	to	TO
cord-022053-idft1p6d	337	22	diagnose	diagnose	VB
cord-022053-idft1p6d	337	23	mixed	mixed	JJ
cord-022053-idft1p6d	337	24	infections	infection	NNS
cord-022053-idft1p6d	337	25	than	than	IN
cord-022053-idft1p6d	337	26	standard	standard	JJ
cord-022053-idft1p6d	337	27	techniques	technique	NNS
cord-022053-idft1p6d	337	28	.	.	.
cord-022053-idft1p6d	338	1	104	104	CD
cord-022053-idft1p6d	338	2	,	,	,
cord-022053-idft1p6d	338	3	105	105	CD
cord-022053-idft1p6d	338	4	For	for	IN
cord-022053-idft1p6d	338	5	viral	viral	JJ
cord-022053-idft1p6d	338	6	pathogens	pathogen	NNS
cord-022053-idft1p6d	338	7	the	the	DT
cord-022053-idft1p6d	338	8	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	338	9	GI	GI	NNP
cord-022053-idft1p6d	338	10	panel	panel	NN
cord-022053-idft1p6d	338	11	has	have	VBZ
cord-022053-idft1p6d	338	12	shown	show	VBN
cord-022053-idft1p6d	338	13	value	value	NN
cord-022053-idft1p6d	338	14	in	in	IN
cord-022053-idft1p6d	338	15	the	the	DT
cord-022053-idft1p6d	338	16	younger	young	JJR
cord-022053-idft1p6d	338	17	age	age	NN
cord-022053-idft1p6d	338	18	groups	group	NNS
cord-022053-idft1p6d	338	19	(	(	-LRB-
cord-022053-idft1p6d	338	20	patients	patient	NNS
cord-022053-idft1p6d	338	21	younger	young	JJR
cord-022053-idft1p6d	338	22	than	than	IN
cord-022053-idft1p6d	338	23	12	12	CD
cord-022053-idft1p6d	338	24	years	year	NNS
cord-022053-idft1p6d	338	25	)	)	-RRB-
cord-022053-idft1p6d	338	26	for	for	IN
cord-022053-idft1p6d	338	27	most	most	RBS
cord-022053-idft1p6d	338	28	tested	test	VBN
cord-022053-idft1p6d	338	29	pathogens	pathogen	NNS
cord-022053-idft1p6d	338	30	(	(	-LRB-
cord-022053-idft1p6d	338	31	sensitivity	sensitivity	NN
cord-022053-idft1p6d	338	32	:	:	:
cord-022053-idft1p6d	338	33	95.5	95.5	CD
cord-022053-idft1p6d	338	34	%	%	NN
cord-022053-idft1p6d	338	35	to	to	IN
cord-022053-idft1p6d	338	36	100	100	CD
cord-022053-idft1p6d	338	37	%	%	NN
cord-022053-idft1p6d	338	38	;	;	,
cord-022053-idft1p6d	338	39	specificity	specificity	NN
cord-022053-idft1p6d	338	40	:	:	:
cord-022053-idft1p6d	338	41	99.1	99.1	CD
cord-022053-idft1p6d	338	42	%	%	NN
cord-022053-idft1p6d	338	43	to	to	IN
cord-022053-idft1p6d	338	44	99.9	99.9	CD
cord-022053-idft1p6d	338	45	%	%	NN
cord-022053-idft1p6d	338	46	)	)	-RRB-
cord-022053-idft1p6d	338	47	,	,	,
cord-022053-idft1p6d	338	48	whereas	whereas	IN
cord-022053-idft1p6d	338	49	Norovirus	Norovirus	NNP
cord-022053-idft1p6d	338	50	appears	appear	VBZ
cord-022053-idft1p6d	338	51	to	to	TO
cord-022053-idft1p6d	338	52	be	be	VB
cord-022053-idft1p6d	338	53	valuable	valuable	JJ
cord-022053-idft1p6d	338	54	across	across	IN
cord-022053-idft1p6d	338	55	all	all	DT
cord-022053-idft1p6d	338	56	age	age	NN
cord-022053-idft1p6d	338	57	groups	group	NNS
cord-022053-idft1p6d	338	58	(	(	-LRB-
cord-022053-idft1p6d	338	59	sensitivity	sensitivity	NN
cord-022053-idft1p6d	338	60	:	:	:
cord-022053-idft1p6d	338	61	94.5	94.5	CD
cord-022053-idft1p6d	338	62	%	%	NN
cord-022053-idft1p6d	338	63	;	;	:
cord-022053-idft1p6d	338	64	specificity	specificity	NN
cord-022053-idft1p6d	338	65	:	:	:
cord-022053-idft1p6d	338	66	98.8	98.8	CD
cord-022053-idft1p6d	338	67	%	%	NN
cord-022053-idft1p6d	338	68	)	)	-RRB-
cord-022053-idft1p6d	338	69	.	.	.
cord-022053-idft1p6d	339	1	103	103	CD
cord-022053-idft1p6d	339	2	Performance	performance	NN
cord-022053-idft1p6d	339	3	for	for	IN
cord-022053-idft1p6d	339	4	parasitic	parasitic	JJ
cord-022053-idft1p6d	339	5	pathogens	pathogen	NNS
cord-022053-idft1p6d	339	6	in	in	IN
cord-022053-idft1p6d	339	7	this	this	DT
cord-022053-idft1p6d	339	8	panel	panel	NN
cord-022053-idft1p6d	339	9	is	be	VBZ
cord-022053-idft1p6d	339	10	equally	equally	RB
cord-022053-idft1p6d	339	11	high	high	JJ
cord-022053-idft1p6d	339	12	for	for	IN
cord-022053-idft1p6d	339	13	Cryptosporidium	cryptosporidium	NN
cord-022053-idft1p6d	339	14	,	,	,
cord-022053-idft1p6d	339	15	Cyclospora	Cyclospora	NNP
cord-022053-idft1p6d	339	16	,	,	,
cord-022053-idft1p6d	339	17	and	and	CC
cord-022053-idft1p6d	339	18	Giardia	Giardia	NNP
cord-022053-idft1p6d	339	19	(	(	-LRB-
cord-022053-idft1p6d	339	20	sensitivity	sensitivity	NN
cord-022053-idft1p6d	339	21	:	:	:
cord-022053-idft1p6d	339	22	100	100	CD
cord-022053-idft1p6d	339	23	%	%	NN
cord-022053-idft1p6d	339	24	;	;	,
cord-022053-idft1p6d	339	25	specificity	specificity	NN
cord-022053-idft1p6d	339	26	:	:	:
cord-022053-idft1p6d	339	27	Vibrio	vibrio	NN
cord-022053-idft1p6d	339	28	cholerae	cholerae	NN
cord-022053-idft1p6d	339	29	,	,	,
cord-022053-idft1p6d	339	30	and	and	CC
cord-022053-idft1p6d	339	31	Y.	Y.	NNP
cord-022053-idft1p6d	339	32	enterocolitica	enterocolitica	NNP
cord-022053-idft1p6d	339	33	.	.	.
cord-022053-idft1p6d	340	1	In	in	IN
cord-022053-idft1p6d	340	2	one	one	CD
cord-022053-idft1p6d	340	3	study	study	NN
cord-022053-idft1p6d	340	4	comparing	compare	VBG
cord-022053-idft1p6d	340	5	the	the	DT
cord-022053-idft1p6d	340	6	xTAG	xtag	NN
cord-022053-idft1p6d	340	7	with	with	IN
cord-022053-idft1p6d	340	8	the	the	DT
cord-022053-idft1p6d	340	9	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	340	10	and	and	CC
cord-022053-idft1p6d	340	11	conventional	conventional	JJ
cord-022053-idft1p6d	340	12	techniques	technique	NNS
cord-022053-idft1p6d	340	13	,	,	,
cord-022053-idft1p6d	340	14	the	the	DT
cord-022053-idft1p6d	340	15	two	two	CD
cord-022053-idft1p6d	340	16	platforms	platform	NNS
cord-022053-idft1p6d	340	17	behaved	behave	VBD
cord-022053-idft1p6d	340	18	comparably	comparably	RB
cord-022053-idft1p6d	340	19	,	,	,
cord-022053-idft1p6d	340	20	with	with	IN
cord-022053-idft1p6d	340	21	the	the	DT
cord-022053-idft1p6d	340	22	xTAG	xtag	NN
cord-022053-idft1p6d	340	23	slightly	slightly	RB
cord-022053-idft1p6d	340	24	trailing	trail	VBG
cord-022053-idft1p6d	340	25	the	the	DT
cord-022053-idft1p6d	340	26	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	340	27	in	in	IN
cord-022053-idft1p6d	340	28	the	the	DT
cord-022053-idft1p6d	340	29	diagnosis	diagnosis	NN
cord-022053-idft1p6d	340	30	of	of	IN
cord-022053-idft1p6d	340	31	mixed	mixed	JJ
cord-022053-idft1p6d	340	32	infections	infection	NNS
cord-022053-idft1p6d	340	33	(	(	-LRB-
cord-022053-idft1p6d	340	34	27	27	CD
cord-022053-idft1p6d	340	35	%	%	NN
cord-022053-idft1p6d	340	36	for	for	IN
cord-022053-idft1p6d	340	37	Fil	Fil	NNP
cord-022053-idft1p6d	340	38	-	-	HYPH
cord-022053-idft1p6d	340	39	mArray	mArray	NNP
cord-022053-idft1p6d	340	40	vs	vs	IN
cord-022053-idft1p6d	340	41	14.1	14.1	CD
cord-022053-idft1p6d	340	42	%	%	NN
cord-022053-idft1p6d	340	43	for	for	IN
cord-022053-idft1p6d	340	44	xTAG	xTAG	NNP
cord-022053-idft1p6d	340	45	vs	vs	IN
cord-022053-idft1p6d	340	46	8.3	8.3	CD
cord-022053-idft1p6d	340	47	%	%	NN
cord-022053-idft1p6d	340	48	for	for	IN
cord-022053-idft1p6d	340	49	routine	routine	JJ
cord-022053-idft1p6d	340	50	testing	testing	NN
cord-022053-idft1p6d	340	51	)	)	-RRB-
cord-022053-idft1p6d	340	52	.	.	.
cord-022053-idft1p6d	341	1	104	104	CD
cord-022053-idft1p6d	342	1	The	the	DT
cord-022053-idft1p6d	342	2	performance	performance	NN
cord-022053-idft1p6d	342	3	of	of	IN
cord-022053-idft1p6d	342	4	xTAG	xTAG	NNP
cord-022053-idft1p6d	342	5	for	for	IN
cord-022053-idft1p6d	342	6	viral	viral	JJ
cord-022053-idft1p6d	342	7	pathogens	pathogen	NNS
cord-022053-idft1p6d	342	8	when	when	WRB
cord-022053-idft1p6d	342	9	compared	compare	VBN
cord-022053-idft1p6d	342	10	with	with	IN
cord-022053-idft1p6d	342	11	realtime	realtime	JJ
cord-022053-idft1p6d	342	12	RT	RT	NNP
cord-022053-idft1p6d	342	13	-	-	HYPH
cord-022053-idft1p6d	342	14	PCR	PCR	NNP
cord-022053-idft1p6d	342	15	and	and	CC
cord-022053-idft1p6d	342	16	multiplex	multiplex	JJ
cord-022053-idft1p6d	342	17	realtime	realtime	NN
cord-022053-idft1p6d	342	18	RT	RT	NNP
cord-022053-idft1p6d	342	19	-	-	HYPH
cord-022053-idft1p6d	342	20	PCR	PCR	NNP
cord-022053-idft1p6d	342	21	,	,	,
cord-022053-idft1p6d	342	22	showed	show	VBD
cord-022053-idft1p6d	342	23	a	a	DT
cord-022053-idft1p6d	342	24	wide	wide	JJ
cord-022053-idft1p6d	342	25	variation	variation	NN
cord-022053-idft1p6d	342	26	in	in	IN
cord-022053-idft1p6d	342	27	sensitivity	sensitivity	NN
cord-022053-idft1p6d	342	28	across	across	IN
cord-022053-idft1p6d	342	29	viruses	virus	NNS
cord-022053-idft1p6d	342	30	for	for	IN
cord-022053-idft1p6d	342	31	xTAG	xtag	JJ
cord-022053-idft1p6d	342	32	(	(	-LRB-
cord-022053-idft1p6d	342	33	20	20	CD
cord-022053-idft1p6d	342	34	%	%	NN
cord-022053-idft1p6d	342	35	to	to	TO
cord-022053-idft1p6d	342	36	100	100	CD
cord-022053-idft1p6d	342	37	%	%	NN
cord-022053-idft1p6d	342	38	)	)	-RRB-
cord-022053-idft1p6d	342	39	,	,	,
cord-022053-idft1p6d	342	40	with	with	IN
cord-022053-idft1p6d	342	41	performance	performance	NN
cord-022053-idft1p6d	342	42	for	for	IN
cord-022053-idft1p6d	342	43	RSV	RSV	NNP
cord-022053-idft1p6d	342	44	-	-	HYPH
cord-022053-idft1p6d	342	45	A	A	NNP
cord-022053-idft1p6d	342	46	,	,	,
cord-022053-idft1p6d	342	47	RSV	RSV	NNP
cord-022053-idft1p6d	342	48	-	-	HYPH
cord-022053-idft1p6d	342	49	B	B	NNP
cord-022053-idft1p6d	342	50	,	,	,
cord-022053-idft1p6d	342	51	H1N1	H1N1	NNP
cord-022053-idft1p6d	342	52	,	,	,
cord-022053-idft1p6d	342	53	and	and	CC
cord-022053-idft1p6d	342	54	influenza	influenza	NN
cord-022053-idft1p6d	342	55	B	b	NN
cord-022053-idft1p6d	342	56	being	be	VBG
cord-022053-idft1p6d	342	57	13.3	13.3	CD
cord-022053-idft1p6d	342	58	%	%	NN
cord-022053-idft1p6d	342	59	,	,	,
cord-022053-idft1p6d	342	60	47.3	47.3	CD
cord-022053-idft1p6d	342	61	%	%	NN
cord-022053-idft1p6d	342	62	,	,	,
cord-022053-idft1p6d	342	63	54.2	54.2	CD
cord-022053-idft1p6d	342	64	%	%	NN
cord-022053-idft1p6d	342	65	,	,	,
cord-022053-idft1p6d	342	66	and	and	CC
cord-022053-idft1p6d	342	67	20	20	CD
cord-022053-idft1p6d	342	68	%	%	NN
cord-022053-idft1p6d	342	69	,	,	,
cord-022053-idft1p6d	342	70	respectively	respectively	RB
cord-022053-idft1p6d	342	71	.	.	.
cord-022053-idft1p6d	343	1	121	121	CD
cord-022053-idft1p6d	344	1	In	in	IN
cord-022053-idft1p6d	344	2	headto	headto	NN
cord-022053-idft1p6d	344	3	-	-	HYPH
cord-022053-idft1p6d	344	4	head	head	NN
cord-022053-idft1p6d	344	5	comparisons	comparison	NNS
cord-022053-idft1p6d	344	6	of	of	IN
cord-022053-idft1p6d	344	7	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	344	8	,	,	,
cord-022053-idft1p6d	344	9	eSensor	eSensor	NNP
cord-022053-idft1p6d	344	10	RVP	RVP	NNP
cord-022053-idft1p6d	344	11	,	,	,
cord-022053-idft1p6d	344	12	and	and	CC
cord-022053-idft1p6d	344	13	xTAG	xTAG	VBD
cord-022053-idft1p6d	344	14	,	,	,
cord-022053-idft1p6d	344	15	the	the	DT
cord-022053-idft1p6d	344	16	three	three	CD
cord-022053-idft1p6d	344	17	methods	method	NNS
cord-022053-idft1p6d	344	18	were	be	VBD
cord-022053-idft1p6d	344	19	essentially	essentially	RB
cord-022053-idft1p6d	344	20	equivalent	equivalent	JJ
cord-022053-idft1p6d	344	21	,	,	,
cord-022053-idft1p6d	344	22	with	with	IN
cord-022053-idft1p6d	344	23	xTAG	xTAG	VBN
cord-022053-idft1p6d	344	24	having	have	VBG
cord-022053-idft1p6d	344	25	the	the	DT
cord-022053-idft1p6d	344	26	best	good	JJS
cord-022053-idft1p6d	344	27	performance	performance	NN
cord-022053-idft1p6d	344	28	for	for	IN
cord-022053-idft1p6d	344	29	influenza	influenza	NN
cord-022053-idft1p6d	344	30	A.	a.	NN
cord-022053-idft1p6d	345	1	122	122	LS
cord-022053-idft1p6d	345	2	Some	some	DT
cord-022053-idft1p6d	345	3	of	of	IN
cord-022053-idft1p6d	345	4	the	the	DT
cord-022053-idft1p6d	345	5	caveats	caveat	NNS
cord-022053-idft1p6d	345	6	of	of	IN
cord-022053-idft1p6d	345	7	the	the	DT
cord-022053-idft1p6d	345	8	xTAG	xtag	JJ
cord-022053-idft1p6d	345	9	system	system	NN
cord-022053-idft1p6d	345	10	are	be	VBP
cord-022053-idft1p6d	345	11	addressed	address	VBN
cord-022053-idft1p6d	345	12	with	with	IN
cord-022053-idft1p6d	345	13	newer	new	JJR
cord-022053-idft1p6d	345	14	Luminex	Luminex	NNP
cord-022053-idft1p6d	345	15	platforms	platform	NNS
cord-022053-idft1p6d	345	16	,	,	,
cord-022053-idft1p6d	345	17	such	such	JJ
cord-022053-idft1p6d	345	18	as	as	IN
cord-022053-idft1p6d	345	19	the	the	DT
cord-022053-idft1p6d	345	20	Aries	Aries	NNP
cord-022053-idft1p6d	345	21	,	,	,
cord-022053-idft1p6d	345	22	which	which	WDT
cord-022053-idft1p6d	345	23	is	be	VBZ
cord-022053-idft1p6d	345	24	a	a	DT
cord-022053-idft1p6d	345	25	sampleto	sampleto	NN
cord-022053-idft1p6d	345	26	-	-	HYPH
cord-022053-idft1p6d	345	27	result	result	JJ
cord-022053-idft1p6d	345	28	platform	platform	NN
cord-022053-idft1p6d	345	29	for	for	IN
cord-022053-idft1p6d	345	30	testing	test	VBG
cord-022053-idft1p6d	345	31	primary	primary	JJ
cord-022053-idft1p6d	345	32	clinical	clinical	JJ
cord-022053-idft1p6d	345	33	specimens	specimen	NNS
cord-022053-idft1p6d	345	34	.	.	.
cord-022053-idft1p6d	346	1	The	the	DT
cord-022053-idft1p6d	346	2	assay	assay	NN
cord-022053-idft1p6d	346	3	consists	consist	VBZ
cord-022053-idft1p6d	346	4	of	of	IN
cord-022053-idft1p6d	346	5	real	real	JJ
cord-022053-idft1p6d	346	6	-	-	HYPH
cord-022053-idft1p6d	346	7	time	time	NN
cord-022053-idft1p6d	346	8	PCR	pcr	NN
cord-022053-idft1p6d	346	9	using	use	VBG
cord-022053-idft1p6d	346	10	the	the	DT
cord-022053-idft1p6d	346	11	Luminex	Luminex	NNP
cord-022053-idft1p6d	346	12	MultiCode	MultiCode	NNP
cord-022053-idft1p6d	346	13	technology	technology	NN
cord-022053-idft1p6d	346	14	.	.	.
cord-022053-idft1p6d	347	1	This	this	DT
cord-022053-idft1p6d	347	2	system	system	NN
cord-022053-idft1p6d	347	3	uses	use	VBZ
cord-022053-idft1p6d	347	4	primers	primer	NNS
cord-022053-idft1p6d	347	5	that	that	WDT
cord-022053-idft1p6d	347	6	incorporate	incorporate	VBP
cord-022053-idft1p6d	347	7	isobases	isobase	NNS
cord-022053-idft1p6d	347	8	,	,	,
cord-022053-idft1p6d	347	9	isoC	isoc	NN
cord-022053-idft1p6d	347	10	and	and	CC
cord-022053-idft1p6d	347	11	isoG	isog	PRP
cord-022053-idft1p6d	347	12	,	,	,
cord-022053-idft1p6d	347	13	which	which	WDT
cord-022053-idft1p6d	347	14	,	,	,
cord-022053-idft1p6d	347	15	when	when	WRB
cord-022053-idft1p6d	347	16	incorporated	incorporate	VBN
cord-022053-idft1p6d	347	17	,	,	,
cord-022053-idft1p6d	347	18	can	can	MD
cord-022053-idft1p6d	347	19	pair	pair	VB
cord-022053-idft1p6d	347	20	only	only	RB
cord-022053-idft1p6d	347	21	with	with	IN
cord-022053-idft1p6d	347	22	each	each	DT
cord-022053-idft1p6d	347	23	other	other	JJ
cord-022053-idft1p6d	347	24	.	.	.
cord-022053-idft1p6d	348	1	One	one	CD
cord-022053-idft1p6d	348	2	isobase	isobase	NN
cord-022053-idft1p6d	348	3	is	be	VBZ
cord-022053-idft1p6d	348	4	tagged	tag	VBN
cord-022053-idft1p6d	348	5	with	with	IN
cord-022053-idft1p6d	348	6	a	a	DT
cord-022053-idft1p6d	348	7	fluorescent	fluorescent	JJ
cord-022053-idft1p6d	348	8	reporter	reporter	NN
cord-022053-idft1p6d	348	9	,	,	,
cord-022053-idft1p6d	348	10	and	and	CC
cord-022053-idft1p6d	348	11	the	the	DT
cord-022053-idft1p6d	348	12	other	other	JJ
cord-022053-idft1p6d	348	13	is	be	VBZ
cord-022053-idft1p6d	348	14	tagged	tag	VBN
cord-022053-idft1p6d	348	15	with	with	IN
cord-022053-idft1p6d	348	16	a	a	DT
cord-022053-idft1p6d	348	17	quencher	quencher	NN
cord-022053-idft1p6d	348	18	.	.	.
cord-022053-idft1p6d	349	1	Upon	upon	IN
cord-022053-idft1p6d	349	2	the	the	DT
cord-022053-idft1p6d	349	3	successful	successful	JJ
cord-022053-idft1p6d	349	4	generation	generation	NN
cord-022053-idft1p6d	349	5	of	of	IN
cord-022053-idft1p6d	349	6	product	product	NN
cord-022053-idft1p6d	349	7	,	,	,
cord-022053-idft1p6d	349	8	both	both	DT
cord-022053-idft1p6d	349	9	isobases	isobase	NNS
cord-022053-idft1p6d	349	10	are	be	VBP
cord-022053-idft1p6d	349	11	incorporated	incorporate	VBN
cord-022053-idft1p6d	349	12	and	and	CC
cord-022053-idft1p6d	349	13	fluorescence	fluorescence	NN
cord-022053-idft1p6d	349	14	decreases	decrease	NNS
cord-022053-idft1p6d	349	15	.	.	.
cord-022053-idft1p6d	350	1	A	a	DT
cord-022053-idft1p6d	350	2	subsequent	subsequent	JJ
cord-022053-idft1p6d	350	3	melt	melt	NN
cord-022053-idft1p6d	350	4	curve	curve	NN
cord-022053-idft1p6d	350	5	analysis	analysis	NN
cord-022053-idft1p6d	350	6	is	be	VBZ
cord-022053-idft1p6d	350	7	performed	perform	VBN
cord-022053-idft1p6d	350	8	,	,	,
cord-022053-idft1p6d	350	9	and	and	CC
cord-022053-idft1p6d	350	10	fluorescence	fluorescence	NN
cord-022053-idft1p6d	350	11	is	be	VBZ
cord-022053-idft1p6d	350	12	restored	restore	VBN
cord-022053-idft1p6d	350	13	.	.	.
cord-022053-idft1p6d	351	1	Unlike	unlike	IN
cord-022053-idft1p6d	351	2	the	the	DT
cord-022053-idft1p6d	351	3	xTAG	xtag	JJ
cord-022053-idft1p6d	351	4	technology	technology	NN
cord-022053-idft1p6d	351	5	,	,	,
cord-022053-idft1p6d	351	6	Multi	Multi	NNP
cord-022053-idft1p6d	351	7	-	-	NNP
cord-022053-idft1p6d	351	8	Code	Code	NNP
cord-022053-idft1p6d	351	9	can	can	MD
cord-022053-idft1p6d	351	10	be	be	VB
cord-022053-idft1p6d	351	11	run	run	VBN
cord-022053-idft1p6d	351	12	on	on	IN
cord-022053-idft1p6d	351	13	either	either	CC
cord-022053-idft1p6d	351	14	commercially	commercially	RB
cord-022053-idft1p6d	351	15	available	available	JJ
cord-022053-idft1p6d	351	16	real	real	JJ
cord-022053-idft1p6d	351	17	-	-	HYPH
cord-022053-idft1p6d	351	18	time	time	NN
cord-022053-idft1p6d	351	19	PCR	PCR	NNP
cord-022053-idft1p6d	351	20	systems	system	NNS
cord-022053-idft1p6d	351	21	or	or	CC
cord-022053-idft1p6d	351	22	within	within	IN
cord-022053-idft1p6d	351	23	the	the	DT
cord-022053-idft1p6d	351	24	sample	sample	NN
cord-022053-idft1p6d	351	25	-	-	HYPH
cord-022053-idft1p6d	351	26	to	to	IN
cord-022053-idft1p6d	351	27	-	-	HYPH
cord-022053-idft1p6d	351	28	result	result	NN
cord-022053-idft1p6d	351	29	Aries	Aries	NNP
cord-022053-idft1p6d	351	30	platform	platform	NN
cord-022053-idft1p6d	351	31	from	from	IN
cord-022053-idft1p6d	351	32	BD	BD	NNP
cord-022053-idft1p6d	351	33	.	.	.
cord-022053-idft1p6d	352	1	There	there	EX
cord-022053-idft1p6d	352	2	is	be	VBZ
cord-022053-idft1p6d	352	3	only	only	RB
cord-022053-idft1p6d	352	4	one	one	CD
cord-022053-idft1p6d	352	5	FDA	FDA	NNP
cord-022053-idft1p6d	352	6	-	-	HYPH
cord-022053-idft1p6d	352	7	approved	approve	VBN
cord-022053-idft1p6d	352	8	test	test	NN
cord-022053-idft1p6d	352	9	for	for	IN
cord-022053-idft1p6d	352	10	this	this	DT
cord-022053-idft1p6d	352	11	panel	panel	NN
cord-022053-idft1p6d	352	12	,	,	,
cord-022053-idft1p6d	352	13	an	an	DT
cord-022053-idft1p6d	352	14	HSV-1	HSV-1	NNP
cord-022053-idft1p6d	352	15	and	and	CC
cord-022053-idft1p6d	352	16	HSV-2	HSV-2	NNP
cord-022053-idft1p6d	352	17	panel	panel	NN
cord-022053-idft1p6d	352	18	for	for	IN
cord-022053-idft1p6d	352	19	use	use	NN
cord-022053-idft1p6d	352	20	in	in	IN
cord-022053-idft1p6d	352	21	testing	testing	NN
cord-022053-idft1p6d	352	22	cutaneous	cutaneous	JJ
cord-022053-idft1p6d	352	23	and	and	CC
cord-022053-idft1p6d	352	24	mucocutaneous	mucocutaneous	JJ
cord-022053-idft1p6d	352	25	lesions	lesion	NNS
cord-022053-idft1p6d	352	26	.	.	.
cord-022053-idft1p6d	353	1	Although	although	IN
cord-022053-idft1p6d	353	2	all	all	DT
cord-022053-idft1p6d	353	3	of	of	IN
cord-022053-idft1p6d	353	4	the	the	DT
cord-022053-idft1p6d	353	5	nucleic	nucleic	JJ
cord-022053-idft1p6d	353	6	acid	acid	NN
cord-022053-idft1p6d	353	7	-	-	HYPH
cord-022053-idft1p6d	353	8	based	base	VBN
cord-022053-idft1p6d	353	9	systems	system	NNS
cord-022053-idft1p6d	353	10	described	describe	VBN
cord-022053-idft1p6d	353	11	above	above	IN
cord-022053-idft1p6d	353	12	demonstrate	demonstrate	VBP
cord-022053-idft1p6d	353	13	high	high	JJ
cord-022053-idft1p6d	353	14	levels	level	NNS
cord-022053-idft1p6d	353	15	of	of	IN
cord-022053-idft1p6d	353	16	sensitivity	sensitivity	NN
cord-022053-idft1p6d	353	17	and	and	CC
cord-022053-idft1p6d	353	18	specificity	specificity	NN
cord-022053-idft1p6d	353	19	,	,	,
cord-022053-idft1p6d	353	20	they	-PRON-	PRP
cord-022053-idft1p6d	353	21	are	be	VBP
cord-022053-idft1p6d	353	22	all	all	DT
cord-022053-idft1p6d	353	23	inherently	inherently	RB
cord-022053-idft1p6d	353	24	limited	limited	JJ
cord-022053-idft1p6d	353	25	to	to	IN
cord-022053-idft1p6d	353	26	a	a	DT
cord-022053-idft1p6d	353	27	select	select	JJ
cord-022053-idft1p6d	353	28	group	group	NN
cord-022053-idft1p6d	353	29	of	of	IN
cord-022053-idft1p6d	353	30	organisms	organism	NNS
cord-022053-idft1p6d	353	31	based	base	VBN
cord-022053-idft1p6d	353	32	on	on	IN
cord-022053-idft1p6d	353	33	the	the	DT
cord-022053-idft1p6d	353	34	probe	probe	NN
cord-022053-idft1p6d	353	35	/	/	SYM
cord-022053-idft1p6d	353	36	primer	primer	NN
cord-022053-idft1p6d	353	37	sets	set	NNS
cord-022053-idft1p6d	353	38	they	-PRON-	PRP
cord-022053-idft1p6d	353	39	contain	contain	VBP
cord-022053-idft1p6d	353	40	.	.	.
cord-022053-idft1p6d	354	1	Open	open	JJ
cord-022053-idft1p6d	354	2	assays	assay	NNS
cord-022053-idft1p6d	354	3	using	use	VBG
cord-022053-idft1p6d	354	4	broad	broad	JJ
cord-022053-idft1p6d	354	5	-	-	HYPH
cord-022053-idft1p6d	354	6	range	range	NN
cord-022053-idft1p6d	354	7	primers	primer	NNS
cord-022053-idft1p6d	355	1	that	that	DT
cord-022053-idft1p6d	355	2	target	target	VBP
cord-022053-idft1p6d	355	3	nearly	nearly	RB
cord-022053-idft1p6d	355	4	universal	universal	JJ
cord-022053-idft1p6d	355	5	sequences	sequence	NNS
cord-022053-idft1p6d	355	6	are	be	VBP
cord-022053-idft1p6d	355	7	nearly	nearly	RB
cord-022053-idft1p6d	355	8	all	all	DT
cord-022053-idft1p6d	355	9	based	base	VBN
cord-022053-idft1p6d	355	10	on	on	IN
cord-022053-idft1p6d	355	11	the	the	DT
cord-022053-idft1p6d	355	12	1977	1977	CD
cord-022053-idft1p6d	355	13	discovery	discovery	NN
cord-022053-idft1p6d	355	14	by	by	IN
cord-022053-idft1p6d	355	15	Carl	Carl	NNP
cord-022053-idft1p6d	355	16	Woese	Woese	NNP
cord-022053-idft1p6d	355	17	that	that	IN
cord-022053-idft1p6d	355	18	the	the	DT
cord-022053-idft1p6d	355	19	16S	16S	NNP
cord-022053-idft1p6d	355	20	rRNA	rRNA	NNP
cord-022053-idft1p6d	355	21	subunit	subunit	NN
cord-022053-idft1p6d	355	22	could	could	MD
cord-022053-idft1p6d	355	23	be	be	VB
cord-022053-idft1p6d	355	24	used	use	VBN
cord-022053-idft1p6d	355	25	to	to	TO
cord-022053-idft1p6d	355	26	determine	determine	VB
cord-022053-idft1p6d	355	27	the	the	DT
cord-022053-idft1p6d	355	28	phylogenetic	phylogenetic	JJ
cord-022053-idft1p6d	355	29	structure	structure	NN
cord-022053-idft1p6d	355	30	of	of	IN
cord-022053-idft1p6d	355	31	the	the	DT
cord-022053-idft1p6d	355	32	domains	domain	NNS
cord-022053-idft1p6d	355	33	of	of	IN
cord-022053-idft1p6d	355	34	life	life	NN
cord-022053-idft1p6d	355	35	.	.	.
cord-022053-idft1p6d	356	1	123	123	CD
cord-022053-idft1p6d	357	1	Although	although	IN
cord-022053-idft1p6d	357	2	this	this	DT
cord-022053-idft1p6d	357	3	idea	idea	NN
cord-022053-idft1p6d	357	4	represented	represent	VBD
cord-022053-idft1p6d	357	5	a	a	DT
cord-022053-idft1p6d	357	6	fundamental	fundamental	JJ
cord-022053-idft1p6d	357	7	shift	shift	NN
cord-022053-idft1p6d	357	8	in	in	IN
cord-022053-idft1p6d	357	9	bacteriology	bacteriology	NN
cord-022053-idft1p6d	357	10	,	,	,
cord-022053-idft1p6d	357	11	it	-PRON-	PRP
cord-022053-idft1p6d	357	12	took	take	VBD
cord-022053-idft1p6d	357	13	many	many	JJ
cord-022053-idft1p6d	357	14	years	year	NNS
cord-022053-idft1p6d	357	15	for	for	IN
cord-022053-idft1p6d	357	16	it	-PRON-	PRP
cord-022053-idft1p6d	357	17	to	to	TO
cord-022053-idft1p6d	357	18	be	be	VB
cord-022053-idft1p6d	357	19	widely	widely	RB
cord-022053-idft1p6d	357	20	accepted	accept	VBN
cord-022053-idft1p6d	357	21	,	,	,
cord-022053-idft1p6d	357	22	and	and	CC
cord-022053-idft1p6d	357	23	even	even	RB
cord-022053-idft1p6d	357	24	longer	long	RBR
cord-022053-idft1p6d	357	25	for	for	IN
cord-022053-idft1p6d	357	26	the	the	DT
cord-022053-idft1p6d	357	27	use	use	NN
cord-022053-idft1p6d	357	28	of	of	IN
cord-022053-idft1p6d	357	29	16S	16S	NNP
cord-022053-idft1p6d	357	30	rRNA	rrna	NN
cord-022053-idft1p6d	357	31	sequencing	sequencing	NN
cord-022053-idft1p6d	357	32	(	(	-LRB-
cord-022053-idft1p6d	357	33	16Sseq	16sseq	CD
cord-022053-idft1p6d	357	34	)	)	-RRB-
cord-022053-idft1p6d	357	35	to	to	TO
cord-022053-idft1p6d	357	36	be	be	VB
cord-022053-idft1p6d	357	37	used	use	VBN
cord-022053-idft1p6d	357	38	as	as	IN
cord-022053-idft1p6d	357	39	a	a	DT
cord-022053-idft1p6d	357	40	standard	standard	JJ
cord-022053-idft1p6d	357	41	means	mean	VBZ
cord-022053-idft1p6d	357	42	for	for	IN
cord-022053-idft1p6d	357	43	identifying	identify	VBG
cord-022053-idft1p6d	357	44	bacteria	bacteria	NNS
cord-022053-idft1p6d	357	45	in	in	IN
cord-022053-idft1p6d	357	46	the	the	DT
cord-022053-idft1p6d	357	47	clinical	clinical	JJ
cord-022053-idft1p6d	357	48	laboratory	laboratory	NN
cord-022053-idft1p6d	357	49	.	.	.
cord-022053-idft1p6d	358	1	124	124	CD
cord-022053-idft1p6d	359	1	However	however	RB
cord-022053-idft1p6d	359	2	,	,	,
cord-022053-idft1p6d	359	3	since	since	IN
cord-022053-idft1p6d	359	4	2000	2000	CD
cord-022053-idft1p6d	359	5	,	,	,
cord-022053-idft1p6d	359	6	16Sseq	16Sseq	NNP
cord-022053-idft1p6d	359	7	has	have	VBZ
cord-022053-idft1p6d	359	8	become	become	VBN
cord-022053-idft1p6d	359	9	the	the	DT
cord-022053-idft1p6d	359	10	gold	gold	NN
cord-022053-idft1p6d	359	11	standard	standard	NN
cord-022053-idft1p6d	359	12	for	for	IN
cord-022053-idft1p6d	359	13	determining	determine	VBG
cord-022053-idft1p6d	359	14	bacterial	bacterial	JJ
cord-022053-idft1p6d	359	15	species	specie	NNS
cord-022053-idft1p6d	359	16	,	,	,
cord-022053-idft1p6d	359	17	and	and	CC
cord-022053-idft1p6d	359	18	its	-PRON-	PRP$
cord-022053-idft1p6d	359	19	analysis	analysis	NN
cord-022053-idft1p6d	359	20	has	have	VBZ
cord-022053-idft1p6d	359	21	led	lead	VBN
cord-022053-idft1p6d	359	22	to	to	IN
cord-022053-idft1p6d	359	23	a	a	DT
cord-022053-idft1p6d	359	24	great	great	JJ
cord-022053-idft1p6d	359	25	deal	deal	NN
cord-022053-idft1p6d	359	26	of	of	IN
cord-022053-idft1p6d	359	27	restructuring	restructure	VBG
cord-022053-idft1p6d	359	28	and	and	CC
cord-022053-idft1p6d	359	29	renaming	rename	VBG
cord-022053-idft1p6d	359	30	among	among	IN
cord-022053-idft1p6d	359	31	phyla	phylum	NNS
cord-022053-idft1p6d	359	32	.	.	.
cord-022053-idft1p6d	360	1	125	125	CD
cord-022053-idft1p6d	361	1	Briefly	briefly	RB
cord-022053-idft1p6d	361	2	,	,	,
cord-022053-idft1p6d	361	3	the	the	DT
cord-022053-idft1p6d	361	4	16S	16S	NNP
cord-022053-idft1p6d	361	5	gene	gene	NN
cord-022053-idft1p6d	361	6	encodes	encode	VBZ
cord-022053-idft1p6d	361	7	a	a	DT
cord-022053-idft1p6d	361	8	portion	portion	NN
cord-022053-idft1p6d	361	9	of	of	IN
cord-022053-idft1p6d	361	10	the	the	DT
cord-022053-idft1p6d	361	11	small	small	JJ
cord-022053-idft1p6d	361	12	ribosomal	ribosomal	NN
cord-022053-idft1p6d	361	13	(	(	-LRB-
cord-022053-idft1p6d	361	14	30S	30S	NNP
cord-022053-idft1p6d	361	15	)	)	-RRB-
cord-022053-idft1p6d	361	16	subunit	subunit	NN
cord-022053-idft1p6d	361	17	and	and	CC
cord-022053-idft1p6d	361	18	is	be	VBZ
cord-022053-idft1p6d	361	19	composed	compose	VBN
cord-022053-idft1p6d	361	20	of	of	IN
cord-022053-idft1p6d	361	21	nine	nine	CD
cord-022053-idft1p6d	361	22	variable	variable	JJ
cord-022053-idft1p6d	361	23	regions	region	NNS
cord-022053-idft1p6d	361	24	alternating	alternate	VBG
cord-022053-idft1p6d	361	25	with	with	IN
cord-022053-idft1p6d	361	26	nine	nine	CD
cord-022053-idft1p6d	361	27	conserved	conserve	VBN
cord-022053-idft1p6d	361	28	regions	region	NNS
cord-022053-idft1p6d	361	29	(	(	-LRB-
cord-022053-idft1p6d	361	30	Fig	fig	NN
cord-022053-idft1p6d	361	31	.	.	.
cord-022053-idft1p6d	361	32	6.2	6.2	CD
cord-022053-idft1p6d	361	33	)	)	-RRB-
cord-022053-idft1p6d	361	34	.	.	.
cord-022053-idft1p6d	362	1	The	the	DT
cord-022053-idft1p6d	362	2	gene	gene	NN
cord-022053-idft1p6d	362	3	is	be	VBZ
cord-022053-idft1p6d	362	4	sequenced	sequence	VBN
cord-022053-idft1p6d	362	5	using	use	VBG
cord-022053-idft1p6d	362	6	primers	primer	NNS
cord-022053-idft1p6d	362	7	that	that	WDT
cord-022053-idft1p6d	362	8	bind	bind	VBP
cord-022053-idft1p6d	362	9	to	to	IN
cord-022053-idft1p6d	362	10	the	the	DT
cord-022053-idft1p6d	362	11	highly	highly	RB
cord-022053-idft1p6d	362	12	conserved	conserved	JJ
cord-022053-idft1p6d	362	13	regions	region	NNS
cord-022053-idft1p6d	362	14	and	and	CC
cord-022053-idft1p6d	362	15	then	then	RB
cord-022053-idft1p6d	362	16	compared	compare	VBN
cord-022053-idft1p6d	362	17	with	with	IN
cord-022053-idft1p6d	362	18	a	a	DT
cord-022053-idft1p6d	362	19	reference	reference	NN
cord-022053-idft1p6d	362	20	database	database	NN
cord-022053-idft1p6d	362	21	to	to	TO
cord-022053-idft1p6d	362	22	identify	identify	VB
cord-022053-idft1p6d	362	23	an	an	DT
cord-022053-idft1p6d	362	24	isolate	isolate	NN
cord-022053-idft1p6d	362	25	.	.	.
cord-022053-idft1p6d	363	1	The	the	DT
cord-022053-idft1p6d	363	2	choice	choice	NN
cord-022053-idft1p6d	363	3	of	of	IN
cord-022053-idft1p6d	363	4	database	database	NN
cord-022053-idft1p6d	363	5	is	be	VBZ
cord-022053-idft1p6d	363	6	typically	typically	RB
cord-022053-idft1p6d	363	7	the	the	DT
cord-022053-idft1p6d	363	8	most	most	RBS
cord-022053-idft1p6d	363	9	challenging	challenging	JJ
cord-022053-idft1p6d	363	10	part	part	NN
cord-022053-idft1p6d	363	11	of	of	IN
cord-022053-idft1p6d	363	12	the	the	DT
cord-022053-idft1p6d	363	13	assay	assay	NN
cord-022053-idft1p6d	363	14	.	.	.
cord-022053-idft1p6d	364	1	There	there	EX
cord-022053-idft1p6d	364	2	are	be	VBP
cord-022053-idft1p6d	364	3	a	a	DT
cord-022053-idft1p6d	364	4	number	number	NN
cord-022053-idft1p6d	364	5	of	of	IN
cord-022053-idft1p6d	364	6	databases	database	NNS
cord-022053-idft1p6d	364	7	that	that	WDT
cord-022053-idft1p6d	364	8	can	can	MD
cord-022053-idft1p6d	364	9	be	be	VB
cord-022053-idft1p6d	364	10	used	use	VBN
cord-022053-idft1p6d	364	11	to	to	TO
cord-022053-idft1p6d	364	12	identify	identify	VB
cord-022053-idft1p6d	364	13	the	the	DT
cord-022053-idft1p6d	364	14	sequence	sequence	NN
cord-022053-idft1p6d	364	15	,	,	,
cord-022053-idft1p6d	364	16	ranging	range	VBG
cord-022053-idft1p6d	364	17	from	from	IN
cord-022053-idft1p6d	364	18	large	large	JJ
cord-022053-idft1p6d	364	19	,	,	,
cord-022053-idft1p6d	364	20	public	public	JJ
cord-022053-idft1p6d	364	21	,	,	,
cord-022053-idft1p6d	364	22	uncurated	uncurated	JJ
cord-022053-idft1p6d	364	23	or	or	CC
cord-022053-idft1p6d	364	24	partially	partially	RB
cord-022053-idft1p6d	364	25	curated	curate	VBN
cord-022053-idft1p6d	364	26	databases	database	NNS
cord-022053-idft1p6d	364	27	,	,	,
cord-022053-idft1p6d	364	28	such	such	JJ
cord-022053-idft1p6d	364	29	as	as	IN
cord-022053-idft1p6d	364	30	Genbank	Genbank	NNP
cord-022053-idft1p6d	364	31	and	and	CC
cord-022053-idft1p6d	364	32	the	the	DT
cord-022053-idft1p6d	364	33	Ribosome	Ribosome	NNP
cord-022053-idft1p6d	364	34	Database	Database	NNP
cord-022053-idft1p6d	364	35	Project	Project	NNP
cord-022053-idft1p6d	364	36	(	(	-LRB-
cord-022053-idft1p6d	364	37	RDP	RDP	NNP
cord-022053-idft1p6d	364	38	,	,	,
cord-022053-idft1p6d	364	39	University	University	NNP
cord-022053-idft1p6d	364	40	of	of	IN
cord-022053-idft1p6d	364	41	Michigan	Michigan	NNP
cord-022053-idft1p6d	364	42	)	)	-RRB-
cord-022053-idft1p6d	364	43	to	to	IN
cord-022053-idft1p6d	364	44	commercial	commercial	JJ
cord-022053-idft1p6d	364	45	,	,	,
cord-022053-idft1p6d	364	46	highly	highly	RB
cord-022053-idft1p6d	364	47	curated	curate	VBN
cord-022053-idft1p6d	364	48	collections	collection	NNS
cord-022053-idft1p6d	364	49	with	with	IN
cord-022053-idft1p6d	364	50	a	a	DT
cord-022053-idft1p6d	364	51	much	much	RB
cord-022053-idft1p6d	364	52	more	more	RBR
cord-022053-idft1p6d	364	53	limited	limited	JJ
cord-022053-idft1p6d	364	54	scope	scope	NN
cord-022053-idft1p6d	364	55	.	.	.
cord-022053-idft1p6d	365	1	Identification	identification	NN
cord-022053-idft1p6d	365	2	algorithms	algorithm	NNS
cord-022053-idft1p6d	365	3	include	include	VBP
cord-022053-idft1p6d	365	4	Ripseq	Ripseq	NNP
cord-022053-idft1p6d	365	5	(	(	-LRB-
cord-022053-idft1p6d	365	6	Pathogenomix	Pathogenomix	NNP
cord-022053-idft1p6d	365	7	,	,	,
cord-022053-idft1p6d	365	8	Santa	Santa	NNP
cord-022053-idft1p6d	365	9	Cruz	Cruz	NNP
cord-022053-idft1p6d	365	10	,	,	,
cord-022053-idft1p6d	365	11	California	California	NNP
cord-022053-idft1p6d	365	12	)	)	-RRB-
cord-022053-idft1p6d	365	13	,	,	.
cord-022053-idft1p6d	366	1	the	the	DT
cord-022053-idft1p6d	366	2	Integrated	Integrated	NNP
cord-022053-idft1p6d	366	3	Database	Database	NNP
cord-022053-idft1p6d	366	4	Network	Network	NNP
cord-022053-idft1p6d	366	5	System	System	NNP
cord-022053-idft1p6d	366	6	has	have	VBZ
cord-022053-idft1p6d	366	7	a	a	DT
cord-022053-idft1p6d	366	8	TAT	tat	NN
cord-022053-idft1p6d	366	9	of	of	IN
cord-022053-idft1p6d	366	10	approximately	approximately	RB
cord-022053-idft1p6d	366	11	2	2	CD
cord-022053-idft1p6d	366	12	hours	hour	NNS
cord-022053-idft1p6d	366	13	and	and	CC
cord-022053-idft1p6d	366	14	has	have	VBZ
cord-022053-idft1p6d	366	15	the	the	DT
cord-022053-idft1p6d	366	16	advantage	advantage	NN
cord-022053-idft1p6d	366	17	of	of	IN
cord-022053-idft1p6d	366	18	offering	offer	VBG
cord-022053-idft1p6d	366	19	flexible	flexible	JJ
cord-022053-idft1p6d	366	20	pricing	pricing	NN
cord-022053-idft1p6d	366	21	by	by	IN
cord-022053-idft1p6d	366	22	which	which	WDT
cord-022053-idft1p6d	366	23	the	the	DT
cord-022053-idft1p6d	366	24	laboratory	laboratory	NN
cord-022053-idft1p6d	366	25	is	be	VBZ
cord-022053-idft1p6d	366	26	charged	charge	VBN
cord-022053-idft1p6d	366	27	only	only	RB
cord-022053-idft1p6d	366	28	for	for	IN
cord-022053-idft1p6d	366	29	the	the	DT
cord-022053-idft1p6d	366	30	tests	test	NNS
cord-022053-idft1p6d	366	31	they	-PRON-	PRP
cord-022053-idft1p6d	366	32	request	request	VBP
cord-022053-idft1p6d	366	33	,	,	,
cord-022053-idft1p6d	366	34	instead	instead	RB
cord-022053-idft1p6d	366	35	of	of	IN
cord-022053-idft1p6d	366	36	the	the	DT
cord-022053-idft1p6d	366	37	entire	entire	JJ
cord-022053-idft1p6d	366	38	panel	panel	NN
cord-022053-idft1p6d	366	39	.	.	.
cord-022053-idft1p6d	367	1	Disadvantages	disadvantage	NNS
cord-022053-idft1p6d	367	2	include	include	VBP
cord-022053-idft1p6d	367	3	the	the	DT
cord-022053-idft1p6d	367	4	need	need	NN
cord-022053-idft1p6d	367	5	to	to	TO
cord-022053-idft1p6d	367	6	select	select	VB
cord-022053-idft1p6d	367	7	the	the	DT
cord-022053-idft1p6d	367	8	appropriate	appropriate	JJ
cord-022053-idft1p6d	367	9	cartridge	cartridge	NN
cord-022053-idft1p6d	367	10	based	base	VBN
cord-022053-idft1p6d	367	11	on	on	IN
cord-022053-idft1p6d	367	12	Gram	Gram	NNP
cord-022053-idft1p6d	367	13	stain	stain	NN
cord-022053-idft1p6d	367	14	results	result	NNS
cord-022053-idft1p6d	367	15	for	for	IN
cord-022053-idft1p6d	367	16	bloodstream	bloodstream	NN
cord-022053-idft1p6d	367	17	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	367	18	.	.	.
cord-022053-idft1p6d	368	1	Respiratory	respiratory	JJ
cord-022053-idft1p6d	368	2	,	,	,
cord-022053-idft1p6d	368	3	GI	GI	NNP
cord-022053-idft1p6d	368	4	,	,	,
cord-022053-idft1p6d	368	5	and	and	CC
cord-022053-idft1p6d	368	6	bloodstream	bloodstream	NN
cord-022053-idft1p6d	368	7	panels	panel	NNS
cord-022053-idft1p6d	368	8	are	be	VBP
cord-022053-idft1p6d	368	9	available	available	JJ
cord-022053-idft1p6d	368	10	.	.	.
cord-022053-idft1p6d	369	1	The	the	DT
cord-022053-idft1p6d	369	2	Verigene	Verigene	NNP
cord-022053-idft1p6d	369	3	platform	platform	NN
cord-022053-idft1p6d	369	4	can	can	MD
cord-022053-idft1p6d	369	5	detect	detect	VB
cord-022053-idft1p6d	369	6	13	13	CD
cord-022053-idft1p6d	369	7	respiratory	respiratory	JJ
cord-022053-idft1p6d	369	8	viruses	virus	NNS
cord-022053-idft1p6d	369	9	with	with	IN
cord-022053-idft1p6d	369	10	high	high	JJ
cord-022053-idft1p6d	369	11	sensitivity	sensitivity	NN
cord-022053-idft1p6d	369	12	(	(	-LRB-
cord-022053-idft1p6d	369	13	including	include	VBG
cord-022053-idft1p6d	369	14	multiple	multiple	JJ
cord-022053-idft1p6d	369	15	types	type	NNS
cord-022053-idft1p6d	369	16	of	of	IN
cord-022053-idft1p6d	369	17	influenza	influenza	NN
cord-022053-idft1p6d	369	18	,	,	,
cord-022053-idft1p6d	369	19	parainfluenza	parainfluenza	NNP
cord-022053-idft1p6d	369	20	)	)	-RRB-
cord-022053-idft1p6d	369	21	and	and	CC
cord-022053-idft1p6d	369	22	three	three	CD
cord-022053-idft1p6d	369	23	Bordetella	Bordetella	NNP
cord-022053-idft1p6d	369	24	species	specie	NNS
cord-022053-idft1p6d	369	25	(	(	-LRB-
cord-022053-idft1p6d	369	26	B.	B.	NNP
cord-022053-idft1p6d	369	27	pertussis	pertussis	NN
cord-022053-idft1p6d	369	28	,	,	,
cord-022053-idft1p6d	369	29	Bordetella	Bordetella	NNP
cord-022053-idft1p6d	369	30	parapertussis/	parapertussis/	POS
cord-022053-idft1p6d	369	31	Bordetella	Bordetella	NNP
cord-022053-idft1p6d	369	32	bronchiseptica	bronchiseptica	NNP
cord-022053-idft1p6d	369	33	,	,	,
cord-022053-idft1p6d	369	34	and	and	CC
cord-022053-idft1p6d	369	35	Bordetella	Bordetella	NNP
cord-022053-idft1p6d	369	36	holmesii	holmesii	NNP
cord-022053-idft1p6d	369	37	)	)	-RRB-
cord-022053-idft1p6d	369	38	,	,	,
cord-022053-idft1p6d	369	39	114	114	CD
cord-022053-idft1p6d	369	40	,	,	,
cord-022053-idft1p6d	369	41	115	115	CD
cord-022053-idft1p6d	369	42	although	although	IN
cord-022053-idft1p6d	369	43	one	one	CD
cord-022053-idft1p6d	369	44	advantage	advantage	NN
cord-022053-idft1p6d	369	45	of	of	IN
cord-022053-idft1p6d	369	46	this	this	DT
cord-022053-idft1p6d	369	47	system	system	NN
cord-022053-idft1p6d	369	48	is	be	VBZ
cord-022053-idft1p6d	369	49	the	the	DT
cord-022053-idft1p6d	369	50	flexibility	flexibility	NN
cord-022053-idft1p6d	369	51	to	to	TO
cord-022053-idft1p6d	369	52	test	test	VB
cord-022053-idft1p6d	369	53	limited	limited	JJ
cord-022053-idft1p6d	369	54	panels	panel	NNS
cord-022053-idft1p6d	369	55	based	base	VBN
cord-022053-idft1p6d	369	56	on	on	IN
cord-022053-idft1p6d	369	57	a	a	DT
cord-022053-idft1p6d	369	58	given	give	VBN
cord-022053-idft1p6d	369	59	population	population	NN
cord-022053-idft1p6d	369	60	.	.	.
cord-022053-idft1p6d	370	1	The	the	DT
cord-022053-idft1p6d	370	2	GI	GI	NNP
cord-022053-idft1p6d	370	3	panel	panel	NN
cord-022053-idft1p6d	370	4	is	be	VBZ
cord-022053-idft1p6d	370	5	somewhat	somewhat	RB
cord-022053-idft1p6d	370	6	more	more	RBR
cord-022053-idft1p6d	370	7	limited	limited	JJ
cord-022053-idft1p6d	370	8	than	than	IN
cord-022053-idft1p6d	370	9	the	the	DT
cord-022053-idft1p6d	370	10	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	370	11	,	,	,
cord-022053-idft1p6d	370	12	covering	cover	VBG
cord-022053-idft1p6d	370	13	22	22	CD
cord-022053-idft1p6d	370	14	targets	target	NNS
cord-022053-idft1p6d	370	15	,	,	,
cord-022053-idft1p6d	370	16	including	include	VBG
cord-022053-idft1p6d	370	17	13	13	CD
cord-022053-idft1p6d	370	18	bacteria	bacteria	NNS
cord-022053-idft1p6d	370	19	,	,	,
cord-022053-idft1p6d	370	20	5	5	CD
cord-022053-idft1p6d	370	21	viruses	virus	NNS
cord-022053-idft1p6d	370	22	,	,	,
cord-022053-idft1p6d	370	23	and	and	CC
cord-022053-idft1p6d	370	24	4	4	CD
cord-022053-idft1p6d	370	25	parasites	parasite	NNS
cord-022053-idft1p6d	370	26	.	.	.
cord-022053-idft1p6d	371	1	Bacteria	Bacteria	NNS
cord-022053-idft1p6d	371	2	include	include	VBP
cord-022053-idft1p6d	371	3	the	the	DT
cord-022053-idft1p6d	371	4	Campylobacter	Campylobacter	NNP
cord-022053-idft1p6d	371	5	group	group	NN
cord-022053-idft1p6d	371	6	,	,	,
cord-022053-idft1p6d	371	7	Salmonella	Salmonella	NNP
cord-022053-idft1p6d	371	8	spp	spp	NNS
cord-022053-idft1p6d	371	9	.	.	.
cord-022053-idft1p6d	372	1	,	,	,
cord-022053-idft1p6d	372	2	Shigella	Shigella	NNP
cord-022053-idft1p6d	372	3	spp	spp	NNS
cord-022053-idft1p6d	372	4	.	.	.
cord-022053-idft1p6d	373	1	,	,	,
cord-022053-idft1p6d	373	2	Vibrio	Vibrio	NNP
cord-022053-idft1p6d	373	3	group	group	NN
cord-022053-idft1p6d	373	4	,	,	,
cord-022053-idft1p6d	373	5	and	and	CC
cord-022053-idft1p6d	373	6	Y.	Y.	NNP
cord-022053-idft1p6d	373	7	enterocolitica	enterocolitica	NNP
cord-022053-idft1p6d	373	8	,	,	,
cord-022053-idft1p6d	373	9	as	as	RB
cord-022053-idft1p6d	373	10	well	well	RB
cord-022053-idft1p6d	373	11	as	as	IN
cord-022053-idft1p6d	373	12	Shiga	Shiga	NNP
cord-022053-idft1p6d	373	13	toxin	toxin	NN
cord-022053-idft1p6d	373	14	.	.	.
cord-022053-idft1p6d	374	1	In	in	IN
cord-022053-idft1p6d	374	2	one	one	CD
cord-022053-idft1p6d	374	3	study	study	NN
cord-022053-idft1p6d	374	4	of	of	IN
cord-022053-idft1p6d	374	5	725	725	CD
cord-022053-idft1p6d	374	6	stool	stool	NN
cord-022053-idft1p6d	374	7	samples	sample	NNS
cord-022053-idft1p6d	374	8	the	the	DT
cord-022053-idft1p6d	374	9	Verigene	Verigene	NNP
cord-022053-idft1p6d	374	10	demonstrated	demonstrate	VBD
cord-022053-idft1p6d	374	11	a	a	DT
cord-022053-idft1p6d	374	12	98.5	98.5	CD
cord-022053-idft1p6d	374	13	%	%	NN
cord-022053-idft1p6d	374	14	agreement	agreement	NN
cord-022053-idft1p6d	374	15	rate	rate	NN
cord-022053-idft1p6d	374	16	with	with	IN
cord-022053-idft1p6d	374	17	culture	culture	NN
cord-022053-idft1p6d	374	18	.	.	.
cord-022053-idft1p6d	375	1	116	116	CD
cord-022053-idft1p6d	376	1	For	for	IN
cord-022053-idft1p6d	376	2	the	the	DT
cord-022053-idft1p6d	376	3	diagnosis	diagnosis	NN
cord-022053-idft1p6d	376	4	of	of	IN
cord-022053-idft1p6d	376	5	bloodstream	bloodstream	NN
cord-022053-idft1p6d	376	6	infections	infection	NNS
cord-022053-idft1p6d	376	7	,	,	,
cord-022053-idft1p6d	376	8	the	the	DT
cord-022053-idft1p6d	376	9	Verigene	Verigene	NNP
cord-022053-idft1p6d	376	10	system	system	NN
cord-022053-idft1p6d	376	11	has	have	VBZ
cord-022053-idft1p6d	376	12	separate	separate	JJ
cord-022053-idft1p6d	376	13	cartridges	cartridge	NNS
cord-022053-idft1p6d	376	14	for	for	IN
cord-022053-idft1p6d	376	15	gram	gram	NN
cord-022053-idft1p6d	376	16	-	-	HYPH
cord-022053-idft1p6d	376	17	positive	positive	JJ
cord-022053-idft1p6d	376	18	and	and	CC
cord-022053-idft1p6d	376	19	gram	gram	JJ
cord-022053-idft1p6d	376	20	-	-	HYPH
cord-022053-idft1p6d	376	21	negative	negative	JJ
cord-022053-idft1p6d	376	22	organisms	organism	NNS
cord-022053-idft1p6d	376	23	,	,	,
cord-022053-idft1p6d	376	24	necessitating	necessitate	VBG
cord-022053-idft1p6d	376	25	an	an	DT
cord-022053-idft1p6d	376	26	accurate	accurate	JJ
cord-022053-idft1p6d	376	27	Gram	gram	NN
cord-022053-idft1p6d	376	28	stain	stain	NN
cord-022053-idft1p6d	376	29	to	to	TO
cord-022053-idft1p6d	376	30	pick	pick	VB
cord-022053-idft1p6d	376	31	the	the	DT
cord-022053-idft1p6d	376	32	appropriate	appropriate	JJ
cord-022053-idft1p6d	376	33	test	test	NN
cord-022053-idft1p6d	376	34	and	and	CC
cord-022053-idft1p6d	376	35	making	make	VBG
cord-022053-idft1p6d	376	36	polymicrobial	polymicrobial	JJ
cord-022053-idft1p6d	376	37	testing	test	VBG
cord-022053-idft1p6d	376	38	a	a	DT
cord-022053-idft1p6d	376	39	bit	bit	NN
cord-022053-idft1p6d	376	40	more	more	RBR
cord-022053-idft1p6d	376	41	complicated	complicated	JJ
cord-022053-idft1p6d	376	42	.	.	.
cord-022053-idft1p6d	377	1	Each	each	DT
cord-022053-idft1p6d	377	2	panel	panel	NN
cord-022053-idft1p6d	377	3	assesses	assess	VBZ
cord-022053-idft1p6d	377	4	a	a	DT
cord-022053-idft1p6d	377	5	few	few	JJ
cord-022053-idft1p6d	377	6	extra	extra	JJ
cord-022053-idft1p6d	377	7	organisms	organism	NNS
cord-022053-idft1p6d	377	8	than	than	IN
cord-022053-idft1p6d	377	9	the	the	DT
cord-022053-idft1p6d	377	10	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	377	11	single	single	JJ
cord-022053-idft1p6d	377	12	panel	panel	NN
cord-022053-idft1p6d	377	13	.	.	.
cord-022053-idft1p6d	378	1	In	in	IN
cord-022053-idft1p6d	378	2	addition	addition	NN
cord-022053-idft1p6d	378	3	,	,	,
cord-022053-idft1p6d	378	4	the	the	DT
cord-022053-idft1p6d	378	5	gram	gram	NN
cord-022053-idft1p6d	378	6	-	-	HYPH
cord-022053-idft1p6d	378	7	negative	negative	JJ
cord-022053-idft1p6d	378	8	panel	panel	NN
cord-022053-idft1p6d	378	9	queries	query	VBZ
cord-022053-idft1p6d	378	10	several	several	JJ
cord-022053-idft1p6d	378	11	more	more	JJR
cord-022053-idft1p6d	378	12	resistance	resistance	NN
cord-022053-idft1p6d	378	13	targets	target	NNS
cord-022053-idft1p6d	378	14	than	than	IN
cord-022053-idft1p6d	378	15	the	the	DT
cord-022053-idft1p6d	378	16	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	378	17	,	,	,
cord-022053-idft1p6d	378	18	including	include	VBG
cord-022053-idft1p6d	378	19	CTX	CTX	NNP
cord-022053-idft1p6d	378	20	-	-	HYPH
cord-022053-idft1p6d	378	21	M	M	NNP
cord-022053-idft1p6d	378	22	,	,	,
cord-022053-idft1p6d	378	23	IMP	IMP	NNP
cord-022053-idft1p6d	378	24	,	,	,
cord-022053-idft1p6d	378	25	NDM	NDM	NNP
cord-022053-idft1p6d	378	26	,	,	,
cord-022053-idft1p6d	378	27	OXA	OXA	NNP
cord-022053-idft1p6d	378	28	,	,	,
cord-022053-idft1p6d	378	29	and	and	CC
cord-022053-idft1p6d	378	30	VIM	vim	NN
cord-022053-idft1p6d	378	31	.	.	.
cord-022053-idft1p6d	379	1	117	117	CD
cord-022053-idft1p6d	379	2	Verigene	Verigene	NNP
cord-022053-idft1p6d	379	3	in	in	IN
cord-022053-idft1p6d	379	4	RPs	rp	NNS
cord-022053-idft1p6d	379	5	has	have	VBZ
cord-022053-idft1p6d	379	6	excellent	excellent	JJ
cord-022053-idft1p6d	379	7	performance	performance	NN
cord-022053-idft1p6d	379	8	for	for	IN
cord-022053-idft1p6d	379	9	the	the	DT
cord-022053-idft1p6d	379	10	influenza	influenza	NN
cord-022053-idft1p6d	379	11	viruses	virus	NNS
cord-022053-idft1p6d	379	12	(	(	-LRB-
cord-022053-idft1p6d	379	13	A	a	NN
cord-022053-idft1p6d	379	14	and	and	CC
cord-022053-idft1p6d	379	15	B	B	NNP
cord-022053-idft1p6d	379	16	)	)	-RRB-
cord-022053-idft1p6d	379	17	,	,	,
cord-022053-idft1p6d	379	18	including	include	VBG
cord-022053-idft1p6d	379	19	the	the	DT
cord-022053-idft1p6d	379	20	ability	ability	NN
cord-022053-idft1p6d	379	21	to	to	TO
cord-022053-idft1p6d	379	22	subtype	subtype	NN
cord-022053-idft1p6d	379	23	viruses	virus	NNS
cord-022053-idft1p6d	379	24	with	with	IN
cord-022053-idft1p6d	379	25	perfect	perfect	JJ
cord-022053-idft1p6d	379	26	agreement	agreement	NN
cord-022053-idft1p6d	379	27	with	with	IN
cord-022053-idft1p6d	379	28	gold	gold	JJ
cord-022053-idft1p6d	379	29	standard	standard	JJ
cord-022053-idft1p6d	379	30	methods	method	NNS
cord-022053-idft1p6d	379	31	(	(	-LRB-
cord-022053-idft1p6d	379	32	molecular	molecular	JJ
cord-022053-idft1p6d	379	33	)	)	-RRB-
cord-022053-idft1p6d	379	34	;	;	:
cord-022053-idft1p6d	379	35	however	however	RB
cord-022053-idft1p6d	379	36	,	,	,
cord-022053-idft1p6d	379	37	mixed	mixed	JJ
cord-022053-idft1p6d	379	38	infections	infection	NNS
cord-022053-idft1p6d	379	39	with	with	IN
cord-022053-idft1p6d	379	40	non	non	JJ
cord-022053-idft1p6d	379	41	-	-	JJ
cord-022053-idft1p6d	379	42	influenza	influenza	JJ
cord-022053-idft1p6d	379	43	viruses	virus	NNS
cord-022053-idft1p6d	379	44	dampen	dampen	VBP
cord-022053-idft1p6d	379	45	performance	performance	NN
cord-022053-idft1p6d	379	46	.	.	.
cord-022053-idft1p6d	380	1	118	118	CD
cord-022053-idft1p6d	380	2	Headto	Headto	NNP
cord-022053-idft1p6d	380	3	-	-	HYPH
cord-022053-idft1p6d	380	4	head	head	NN
cord-022053-idft1p6d	380	5	comparisons	comparison	NNS
cord-022053-idft1p6d	380	6	of	of	IN
cord-022053-idft1p6d	380	7	the	the	DT
cord-022053-idft1p6d	380	8	limited	limited	JJ
cord-022053-idft1p6d	380	9	Verigene	Verigene	NNP
cord-022053-idft1p6d	380	10	panel	panel	NN
cord-022053-idft1p6d	380	11	(	(	-LRB-
cord-022053-idft1p6d	380	12	influenza	influenza	NN
cord-022053-idft1p6d	380	13	A	a	NN
cord-022053-idft1p6d	380	14	and	and	CC
cord-022053-idft1p6d	380	15	B	b	NN
cord-022053-idft1p6d	380	16	,	,	,
cord-022053-idft1p6d	380	17	RSV	RSV	NNP
cord-022053-idft1p6d	380	18	)	)	-RRB-
cord-022053-idft1p6d	380	19	with	with	IN
cord-022053-idft1p6d	380	20	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	380	21	RP	RP	NNP
cord-022053-idft1p6d	380	22	showed	show	VBD
cord-022053-idft1p6d	380	23	equivalent	equivalent	JJ
cord-022053-idft1p6d	380	24	detection	detection	NN
cord-022053-idft1p6d	380	25	of	of	IN
cord-022053-idft1p6d	380	26	the	the	DT
cord-022053-idft1p6d	380	27	three	three	CD
cord-022053-idft1p6d	380	28	major	major	JJ
cord-022053-idft1p6d	380	29	pathogens	pathogen	NNS
cord-022053-idft1p6d	380	30	at	at	IN
cord-022053-idft1p6d	380	31	a	a	DT
cord-022053-idft1p6d	380	32	slightly	slightly	RB
cord-022053-idft1p6d	380	33	reduced	reduce	VBN
cord-022053-idft1p6d	380	34	cost	cost	NN
cord-022053-idft1p6d	380	35	for	for	IN
cord-022053-idft1p6d	380	36	the	the	DT
cord-022053-idft1p6d	380	37	Verigene	Verigene	NNP
cord-022053-idft1p6d	380	38	;	;	:
cord-022053-idft1p6d	380	39	thus	thus	RB
cord-022053-idft1p6d	380	40	analysis	analysis	NN
cord-022053-idft1p6d	380	41	of	of	IN
cord-022053-idft1p6d	380	42	the	the	DT
cord-022053-idft1p6d	380	43	clinical	clinical	JJ
cord-022053-idft1p6d	380	44	population	population	NN
cord-022053-idft1p6d	380	45	and	and	CC
cord-022053-idft1p6d	380	46	the	the	DT
cord-022053-idft1p6d	380	47	desires	desire	NNS
cord-022053-idft1p6d	380	48	of	of	IN
cord-022053-idft1p6d	380	49	the	the	DT
cord-022053-idft1p6d	380	50	local	local	JJ
cord-022053-idft1p6d	380	51	clinical	clinical	JJ
cord-022053-idft1p6d	380	52	team	team	NN
cord-022053-idft1p6d	380	53	for	for	IN
cord-022053-idft1p6d	380	54	reported	report	VBN
cord-022053-idft1p6d	380	55	virus	virus	NN
cord-022053-idft1p6d	380	56	and	and	CC
cord-022053-idft1p6d	380	57	actionable	actionable	JJ
cord-022053-idft1p6d	380	58	diagnoses	diagnosis	NNS
cord-022053-idft1p6d	380	59	may	may	MD
cord-022053-idft1p6d	380	60	help	help	VB
cord-022053-idft1p6d	380	61	in	in	IN
cord-022053-idft1p6d	380	62	choosing	choose	VBG
cord-022053-idft1p6d	380	63	between	between	IN
cord-022053-idft1p6d	380	64	these	these	DT
cord-022053-idft1p6d	380	65	technologies	technology	NNS
cord-022053-idft1p6d	380	66	.	.	.
cord-022053-idft1p6d	381	1	114	114	CD
cord-022053-idft1p6d	381	2	xTAG	xTAG	VBD
cord-022053-idft1p6d	381	3	The	the	DT
cord-022053-idft1p6d	381	4	xTAG	xtag	JJ
cord-022053-idft1p6d	381	5	assay	assay	NN
cord-022053-idft1p6d	381	6	system	system	NN
cord-022053-idft1p6d	381	7	from	from	IN
cord-022053-idft1p6d	381	8	Luminex	Luminex	NNP
cord-022053-idft1p6d	381	9	is	be	VBZ
cord-022053-idft1p6d	381	10	a	a	DT
cord-022053-idft1p6d	381	11	liquid	liquid	JJ
cord-022053-idft1p6d	381	12	array	array	NN
cord-022053-idft1p6d	381	13	based	base	VBN
cord-022053-idft1p6d	381	14	on	on	IN
cord-022053-idft1p6d	381	15	multiplex	multiplex	NN
cord-022053-idft1p6d	381	16	PCR	PCR	NNP
cord-022053-idft1p6d	381	17	followed	follow	VBN
cord-022053-idft1p6d	381	18	by	by	IN
cord-022053-idft1p6d	381	19	amplicon	amplicon	NN
cord-022053-idft1p6d	381	20	extension	extension	NN
cord-022053-idft1p6d	381	21	using	use	VBG
cord-022053-idft1p6d	381	22	a	a	DT
cord-022053-idft1p6d	381	23	targetspecific	targetspecific	NN
cord-022053-idft1p6d	381	24	primer	primer	NN
cord-022053-idft1p6d	381	25	.	.	.
cord-022053-idft1p6d	382	1	The	the	DT
cord-022053-idft1p6d	382	2	extension	extension	NN
cord-022053-idft1p6d	382	3	step	step	NN
cord-022053-idft1p6d	382	4	incorporates	incorporate	VBZ
cord-022053-idft1p6d	382	5	a	a	DT
cord-022053-idft1p6d	382	6	hybridization	hybridization	NN
cord-022053-idft1p6d	382	7	tag	tag	NN
cord-022053-idft1p6d	382	8	onto	onto	IN
cord-022053-idft1p6d	382	9	the	the	DT
cord-022053-idft1p6d	382	10	amplicon	amplicon	NN
cord-022053-idft1p6d	382	11	,	,	,
cord-022053-idft1p6d	382	12	along	along	IN
cord-022053-idft1p6d	382	13	with	with	IN
cord-022053-idft1p6d	382	14	a	a	DT
cord-022053-idft1p6d	382	15	biotin	biotin	NN
cord-022053-idft1p6d	382	16	label	label	NN
cord-022053-idft1p6d	382	17	.	.	.
cord-022053-idft1p6d	383	1	Elongated	elongated	JJ
cord-022053-idft1p6d	383	2	,	,	,
cord-022053-idft1p6d	383	3	tagged	tagged	NNP
cord-022053-idft1p6d	383	4	amplicons	amplicon	NNS
cord-022053-idft1p6d	383	5	are	be	VBP
cord-022053-idft1p6d	383	6	then	then	RB
cord-022053-idft1p6d	383	7	incubated	incubate	VBN
cord-022053-idft1p6d	383	8	with	with	IN
cord-022053-idft1p6d	383	9	polystyrene	polystyrene	NN
cord-022053-idft1p6d	383	10	microbeads	microbead	NNS
cord-022053-idft1p6d	383	11	of	of	IN
cord-022053-idft1p6d	383	12	various	various	JJ
cord-022053-idft1p6d	383	13	fluorescent	fluorescent	NN
cord-022053-idft1p6d	383	14	profiles	profile	NNS
cord-022053-idft1p6d	383	15	,	,	,
cord-022053-idft1p6d	383	16	each	each	DT
cord-022053-idft1p6d	383	17	coated	coat	VBN
cord-022053-idft1p6d	383	18	with	with	IN
cord-022053-idft1p6d	383	19	a	a	DT
cord-022053-idft1p6d	383	20	specific	specific	JJ
cord-022053-idft1p6d	383	21	anti	anti	JJ
cord-022053-idft1p6d	383	22	-	-	JJ
cord-022053-idft1p6d	383	23	tag	tag	JJ
cord-022053-idft1p6d	383	24	sequence	sequence	NN
cord-022053-idft1p6d	383	25	.	.	.
cord-022053-idft1p6d	384	1	Bead	bead	NN
cord-022053-idft1p6d	384	2	/	/	SYM
cord-022053-idft1p6d	384	3	amplicon	amplicon	NN
cord-022053-idft1p6d	384	4	pairs	pair	NNS
cord-022053-idft1p6d	384	5	are	be	VBP
cord-022053-idft1p6d	384	6	then	then	RB
cord-022053-idft1p6d	384	7	stained	stain	VBN
cord-022053-idft1p6d	384	8	with	with	IN
cord-022053-idft1p6d	384	9	another	another	DT
cord-022053-idft1p6d	384	10	streptavidin	streptavidin	NN
cord-022053-idft1p6d	384	11	-	-	HYPH
cord-022053-idft1p6d	384	12	linked	link	VBN
cord-022053-idft1p6d	384	13	fluorophore	fluorophore	NN
cord-022053-idft1p6d	384	14	.	.	.
cord-022053-idft1p6d	385	1	The	the	DT
cord-022053-idft1p6d	385	2	beads	bead	NNS
cord-022053-idft1p6d	385	3	are	be	VBP
cord-022053-idft1p6d	385	4	analyzed	analyze	VBN
cord-022053-idft1p6d	385	5	by	by	IN
cord-022053-idft1p6d	385	6	a	a	DT
cord-022053-idft1p6d	385	7	system	system	NN
cord-022053-idft1p6d	385	8	of	of	IN
cord-022053-idft1p6d	385	9	two	two	CD
cord-022053-idft1p6d	385	10	lasers	laser	NNS
cord-022053-idft1p6d	385	11	on	on	IN
cord-022053-idft1p6d	385	12	the	the	DT
cord-022053-idft1p6d	385	13	xMAP	xmap	JJ
cord-022053-idft1p6d	385	14	instrument	instrument	NN
cord-022053-idft1p6d	385	15	.	.	.
cord-022053-idft1p6d	386	1	The	the	DT
cord-022053-idft1p6d	386	2	first	first	JJ
cord-022053-idft1p6d	386	3	determines	determine	VBZ
cord-022053-idft1p6d	386	4	which	which	WDT
cord-022053-idft1p6d	386	5	beads	bead	NNS
cord-022053-idft1p6d	386	6	are	be	VBP
cord-022053-idft1p6d	386	7	bound	bind	VBN
cord-022053-idft1p6d	386	8	to	to	IN
cord-022053-idft1p6d	386	9	amplicons	amplicon	NNS
cord-022053-idft1p6d	386	10	by	by	IN
cord-022053-idft1p6d	386	11	way	way	NN
cord-022053-idft1p6d	386	12	of	of	IN
cord-022053-idft1p6d	386	13	the	the	DT
cord-022053-idft1p6d	386	14	streptavidinfluorophore	streptavidinfluorophore	NN
cord-022053-idft1p6d	386	15	.	.	.
cord-022053-idft1p6d	387	1	The	the	DT
cord-022053-idft1p6d	387	2	second	second	JJ
cord-022053-idft1p6d	387	3	laser	laser	NN
cord-022053-idft1p6d	387	4	indicates	indicate	VBZ
cord-022053-idft1p6d	387	5	which	which	WDT
cord-022053-idft1p6d	387	6	specific	specific	JJ
cord-022053-idft1p6d	387	7	target	target	NN
cord-022053-idft1p6d	387	8	was	be	VBD
cord-022053-idft1p6d	387	9	amplified	amplify	VBN
cord-022053-idft1p6d	387	10	by	by	IN
cord-022053-idft1p6d	387	11	way	way	NN
cord-022053-idft1p6d	387	12	of	of	IN
cord-022053-idft1p6d	387	13	the	the	DT
cord-022053-idft1p6d	387	14	unique	unique	JJ
cord-022053-idft1p6d	387	15	fluorescence	fluorescence	NN
cord-022053-idft1p6d	387	16	of	of	IN
cord-022053-idft1p6d	387	17	that	that	DT
cord-022053-idft1p6d	387	18	bound	bind	VBN
cord-022053-idft1p6d	387	19	bead	bead	NN
cord-022053-idft1p6d	387	20	.	.	.
cord-022053-idft1p6d	388	1	119	119	CD
cord-022053-idft1p6d	389	1	Although	although	IN
cord-022053-idft1p6d	389	2	the	the	DT
cord-022053-idft1p6d	389	3	Luminex	Luminex	NNP
cord-022053-idft1p6d	389	4	platforms	platform	NNS
cord-022053-idft1p6d	389	5	generally	generally	RB
cord-022053-idft1p6d	389	6	have	have	VBP
cord-022053-idft1p6d	389	7	the	the	DT
cord-022053-idft1p6d	389	8	potential	potential	NN
cord-022053-idft1p6d	389	9	to	to	TO
cord-022053-idft1p6d	389	10	detect	detect	VB
cord-022053-idft1p6d	389	11	the	the	DT
cord-022053-idft1p6d	389	12	greatest	great	JJS
cord-022053-idft1p6d	389	13	number	number	NN
cord-022053-idft1p6d	389	14	of	of	IN
cord-022053-idft1p6d	389	15	targets	target	NNS
cord-022053-idft1p6d	389	16	,	,	,
cord-022053-idft1p6d	389	17	drawbacks	drawback	NNS
cord-022053-idft1p6d	389	18	include	include	VBP
cord-022053-idft1p6d	389	19	the	the	DT
cord-022053-idft1p6d	389	20	need	need	NN
cord-022053-idft1p6d	389	21	for	for	IN
cord-022053-idft1p6d	389	22	a	a	DT
cord-022053-idft1p6d	389	23	separate	separate	JJ
cord-022053-idft1p6d	389	24	nucleic	nucleic	JJ
cord-022053-idft1p6d	389	25	acid	acid	NN
cord-022053-idft1p6d	389	26	extraction	extraction	NN
cord-022053-idft1p6d	389	27	step	step	NN
cord-022053-idft1p6d	389	28	and	and	CC
cord-022053-idft1p6d	389	29	longer	long	RBR
cord-022053-idft1p6d	389	30	TAT	tat	NN
cord-022053-idft1p6d	389	31	(	(	-LRB-
cord-022053-idft1p6d	389	32	4	4	CD
cord-022053-idft1p6d	389	33	hours	hour	NNS
cord-022053-idft1p6d	389	34	or	or	CC
cord-022053-idft1p6d	389	35	longer	long	RBR
cord-022053-idft1p6d	389	36	)	)	-RRB-
cord-022053-idft1p6d	390	1	then	then	RB
cord-022053-idft1p6d	390	2	the	the	DT
cord-022053-idft1p6d	390	3	other	other	JJ
cord-022053-idft1p6d	390	4	multiplex	multiplex	JJ
cord-022053-idft1p6d	390	5	platforms	platform	NNS
cord-022053-idft1p6d	390	6	.	.	.
cord-022053-idft1p6d	391	1	There	there	EX
cord-022053-idft1p6d	391	2	are	be	VBP
cord-022053-idft1p6d	391	3	two	two	CD
cord-022053-idft1p6d	391	4	xTAG	xtag	JJ
cord-022053-idft1p6d	391	5	platforms	platform	NNS
cord-022053-idft1p6d	391	6	focused	focus	VBN
cord-022053-idft1p6d	391	7	on	on	IN
cord-022053-idft1p6d	391	8	respiratory	respiratory	JJ
cord-022053-idft1p6d	391	9	testing	testing	NN
cord-022053-idft1p6d	391	10	:	:	:
cord-022053-idft1p6d	391	11	the	the	DT
cord-022053-idft1p6d	391	12	original	original	JJ
cord-022053-idft1p6d	391	13	xTAG	xtag	JJ
cord-022053-idft1p6d	391	14	platform	platform	NN
cord-022053-idft1p6d	391	15	,	,	,
cord-022053-idft1p6d	391	16	restricted	restrict	VBN
cord-022053-idft1p6d	391	17	to	to	IN
cord-022053-idft1p6d	391	18	viral	viral	JJ
cord-022053-idft1p6d	391	19	pathogens	pathogen	NNS
cord-022053-idft1p6d	391	20	,	,	,
cord-022053-idft1p6d	391	21	and	and	CC
cord-022053-idft1p6d	391	22	the	the	DT
cord-022053-idft1p6d	391	23	next	next	JJ
cord-022053-idft1p6d	391	24	-	-	HYPH
cord-022053-idft1p6d	391	25	generation	generation	NN
cord-022053-idft1p6d	391	26	system	system	NN
cord-022053-idft1p6d	391	27	(	(	-LRB-
cord-022053-idft1p6d	391	28	NxTAG	NxTAG	NNP
cord-022053-idft1p6d	391	29	)	)	-RRB-
cord-022053-idft1p6d	391	30	,	,	,
cord-022053-idft1p6d	391	31	which	which	WDT
cord-022053-idft1p6d	391	32	included	include	VBD
cord-022053-idft1p6d	391	33	several	several	JJ
cord-022053-idft1p6d	391	34	bacterial	bacterial	JJ
cord-022053-idft1p6d	391	35	pathogens	pathogen	NNS
cord-022053-idft1p6d	391	36	as	as	RB
cord-022053-idft1p6d	391	37	well	well	RB
cord-022053-idft1p6d	391	38	,	,	,
cord-022053-idft1p6d	391	39	including	include	VBG
cord-022053-idft1p6d	391	40	Legionella	Legionella	NNP
cord-022053-idft1p6d	391	41	pneumophila	pneumophila	NN
cord-022053-idft1p6d	391	42	.	.	.
cord-022053-idft1p6d	392	1	120	120	CD
cord-022053-idft1p6d	393	1	The	the	DT
cord-022053-idft1p6d	393	2	xTAG	xtag	JJ
cord-022053-idft1p6d	393	3	Gastrointestinal	Gastrointestinal	NNP
cord-022053-idft1p6d	393	4	Pathogens	Pathogens	NNPS
cord-022053-idft1p6d	393	5	Panel	Panel	NNP
cord-022053-idft1p6d	393	6	(	(	-LRB-
cord-022053-idft1p6d	393	7	GPP	GPP	NNP
cord-022053-idft1p6d	393	8	)	)	-RRB-
cord-022053-idft1p6d	393	9	tests	test	NNS
cord-022053-idft1p6d	393	10	for	for	IN
cord-022053-idft1p6d	393	11	nine	nine	CD
cord-022053-idft1p6d	393	12	bacterial	bacterial	JJ
cord-022053-idft1p6d	393	13	,	,	,
cord-022053-idft1p6d	393	14	three	three	CD
cord-022053-idft1p6d	393	15	viral	viral	JJ
cord-022053-idft1p6d	393	16	,	,	,
cord-022053-idft1p6d	393	17	and	and	CC
cord-022053-idft1p6d	393	18	three	three	CD
cord-022053-idft1p6d	393	19	parasitic	parasitic	JJ
cord-022053-idft1p6d	393	20	targets	target	NNS
cord-022053-idft1p6d	393	21	.	.	.
cord-022053-idft1p6d	394	1	Among	among	IN
cord-022053-idft1p6d	394	2	bacterial	bacterial	JJ
cord-022053-idft1p6d	394	3	loci	locus	NNS
cord-022053-idft1p6d	394	4	,	,	,
cord-022053-idft1p6d	394	5	the	the	DT
cord-022053-idft1p6d	394	6	Luminex	Luminex	NNP
cord-022053-idft1p6d	394	7	xTAG	xtag	NN
cord-022053-idft1p6d	394	8	covers	cover	VBZ
cord-022053-idft1p6d	395	1	Campylobacter	Campylobacter	NNP
cord-022053-idft1p6d	395	2	,	,	,
cord-022053-idft1p6d	395	3	C.	C.	NNP
cord-022053-idft1p6d	395	4	difficile	difficile	NN
cord-022053-idft1p6d	395	5	toxin	toxin	NN
cord-022053-idft1p6d	395	6	A	a	NN
cord-022053-idft1p6d	395	7	/	/	SYM
cord-022053-idft1p6d	395	8	B	B	NNP
cord-022053-idft1p6d	395	9	,	,	,
cord-022053-idft1p6d	395	10	E.	E.	NNP
cord-022053-idft1p6d	395	11	coli	coli	NNP
cord-022053-idft1p6d	395	12	O157	O157	NNP
cord-022053-idft1p6d	395	13	,	,	,
cord-022053-idft1p6d	395	14	enterotoxigenic	enterotoxigenic	NNP
cord-022053-idft1p6d	395	15	E.	E.	NNP
cord-022053-idft1p6d	395	16	coli	coli	NNS
cord-022053-idft1p6d	395	17	(	(	-LRB-
cord-022053-idft1p6d	395	18	ETEC	ETEC	NNP
cord-022053-idft1p6d	395	19	)	)	-RRB-
cord-022053-idft1p6d	395	20	LT	LT	NNP
cord-022053-idft1p6d	395	21	/	/	SYM
cord-022053-idft1p6d	395	22	ST	ST	NNP
cord-022053-idft1p6d	395	23	,	,	,
cord-022053-idft1p6d	395	24	Shiga	Shiga	NNP
cord-022053-idft1p6d	395	25	toxin	toxin	NN
cord-022053-idft1p6d	395	26	-	-	HYPH
cord-022053-idft1p6d	395	27	producing	produce	VBG
cord-022053-idft1p6d	395	28	E.	E.	NNP
cord-022053-idft1p6d	395	29	coli	coli	NNS
cord-022053-idft1p6d	395	30	(	(	-LRB-
cord-022053-idft1p6d	395	31	STEC	STEC	NNP
cord-022053-idft1p6d	395	32	)	)	-RRB-
cord-022053-idft1p6d	396	1	stx1	stx1	NNP
cord-022053-idft1p6d	396	2	/	/	SYM
cord-022053-idft1p6d	396	3	stx2	stx2	NNP
cord-022053-idft1p6d	396	4	,	,	,
cord-022053-idft1p6d	396	5	Salmonella	Salmonella	NNP
cord-022053-idft1p6d	396	6	,	,	,
cord-022053-idft1p6d	396	7	Shigella	Shigella	NNP
cord-022053-idft1p6d	396	8	,	,	,
cord-022053-idft1p6d	396	9	Sanger	Sanger	NNP
cord-022053-idft1p6d	396	10	sequencing	sequencing	NN
cord-022053-idft1p6d	396	11	,	,	,
cord-022053-idft1p6d	396	12	which	which	WDT
cord-022053-idft1p6d	396	13	is	be	VBZ
cord-022053-idft1p6d	396	14	generally	generally	RB
cord-022053-idft1p6d	396	15	unable	unable	JJ
cord-022053-idft1p6d	396	16	to	to	TO
cord-022053-idft1p6d	396	17	assess	assess	VB
cord-022053-idft1p6d	396	18	polymicrobial	polymicrobial	JJ
cord-022053-idft1p6d	396	19	infections	infection	NNS
cord-022053-idft1p6d	396	20	,	,	,
cord-022053-idft1p6d	396	21	although	although	IN
cord-022053-idft1p6d	396	22	some	some	DT
cord-022053-idft1p6d	396	23	analysis	analysis	NN
cord-022053-idft1p6d	396	24	software	software	NN
cord-022053-idft1p6d	396	25	packages	package	NNS
cord-022053-idft1p6d	396	26	have	have	VBP
cord-022053-idft1p6d	396	27	algorithms	algorithm	NNS
cord-022053-idft1p6d	396	28	to	to	TO
cord-022053-idft1p6d	396	29	deconvolute	deconvolute	VB
cord-022053-idft1p6d	396	30	traces	trace	NNS
cord-022053-idft1p6d	396	31	of	of	IN
cord-022053-idft1p6d	396	32	16Sseq	16sseq	CD
cord-022053-idft1p6d	396	33	from	from	IN
cord-022053-idft1p6d	396	34	two	two	CD
cord-022053-idft1p6d	396	35	or	or	CC
cord-022053-idft1p6d	396	36	three	three	CD
cord-022053-idft1p6d	396	37	different	different	JJ
cord-022053-idft1p6d	396	38	organisms	organism	NNS
cord-022053-idft1p6d	396	39	.	.	.
cord-022053-idft1p6d	397	1	148	148	CD
cord-022053-idft1p6d	397	2	NGS	NGS	NNP
cord-022053-idft1p6d	397	3	is	be	VBZ
cord-022053-idft1p6d	397	4	a	a	DT
cord-022053-idft1p6d	397	5	high	high	JJ
cord-022053-idft1p6d	397	6	-	-	HYPH
cord-022053-idft1p6d	397	7	throughput	throughput	NN
cord-022053-idft1p6d	397	8	method	method	NN
cord-022053-idft1p6d	397	9	that	that	WDT
cord-022053-idft1p6d	397	10	generally	generally	RB
cord-022053-idft1p6d	397	11	refers	refer	VBZ
cord-022053-idft1p6d	397	12	to	to	IN
cord-022053-idft1p6d	397	13	a	a	DT
cord-022053-idft1p6d	397	14	massively	massively	RB
cord-022053-idft1p6d	397	15	parallel	parallel	JJ
cord-022053-idft1p6d	397	16	process	process	NN
cord-022053-idft1p6d	397	17	that	that	WDT
cord-022053-idft1p6d	397	18	generates	generate	VBZ
cord-022053-idft1p6d	397	19	tremendous	tremendous	JJ
cord-022053-idft1p6d	397	20	quantities	quantity	NNS
cord-022053-idft1p6d	397	21	of	of	IN
cord-022053-idft1p6d	397	22	raw	raw	JJ
cord-022053-idft1p6d	397	23	sequence	sequence	NN
cord-022053-idft1p6d	397	24	reads	read	VBZ
cord-022053-idft1p6d	397	25	.	.	.
cord-022053-idft1p6d	398	1	There	there	EX
cord-022053-idft1p6d	398	2	are	be	VBP
cord-022053-idft1p6d	398	3	a	a	DT
cord-022053-idft1p6d	398	4	number	number	NN
cord-022053-idft1p6d	398	5	of	of	IN
cord-022053-idft1p6d	398	6	commercially	commercially	RB
cord-022053-idft1p6d	398	7	available	available	JJ
cord-022053-idft1p6d	398	8	platforms	platform	NNS
cord-022053-idft1p6d	398	9	that	that	WDT
cord-022053-idft1p6d	398	10	vary	vary	VBP
cord-022053-idft1p6d	398	11	in	in	IN
cord-022053-idft1p6d	398	12	the	the	DT
cord-022053-idft1p6d	398	13	quantity	quantity	NN
cord-022053-idft1p6d	398	14	,	,	,
cord-022053-idft1p6d	398	15	quality	quality	NN
cord-022053-idft1p6d	398	16	,	,	,
cord-022053-idft1p6d	398	17	and	and	CC
cord-022053-idft1p6d	398	18	length	length	NN
cord-022053-idft1p6d	398	19	of	of	IN
cord-022053-idft1p6d	398	20	the	the	DT
cord-022053-idft1p6d	398	21	reads	read	NNS
cord-022053-idft1p6d	398	22	that	that	IN
cord-022053-idft1p6d	398	23	they	-PRON-	PRP
cord-022053-idft1p6d	398	24	produce	produce	VBP
cord-022053-idft1p6d	398	25	.	.	.
cord-022053-idft1p6d	399	1	The	the	DT
cord-022053-idft1p6d	399	2	majority	majority	NN
cord-022053-idft1p6d	399	3	of	of	IN
cord-022053-idft1p6d	399	4	these	these	DT
cord-022053-idft1p6d	399	5	include	include	VBP
cord-022053-idft1p6d	399	6	a	a	DT
cord-022053-idft1p6d	399	7	step	step	NN
cord-022053-idft1p6d	399	8	for	for	IN
cord-022053-idft1p6d	399	9	clonal	clonal	JJ
cord-022053-idft1p6d	399	10	amplification	amplification	NN
cord-022053-idft1p6d	399	11	of	of	IN
cord-022053-idft1p6d	399	12	the	the	DT
cord-022053-idft1p6d	399	13	template	template	NN
cord-022053-idft1p6d	399	14	and	and	CC
cord-022053-idft1p6d	399	15	produce	produce	VBP
cord-022053-idft1p6d	399	16	short	short	JJ
cord-022053-idft1p6d	399	17	(	(	-LRB-
cord-022053-idft1p6d	399	18	50	50	CD
cord-022053-idft1p6d	399	19	to	to	TO
cord-022053-idft1p6d	399	20	400	400	CD
cord-022053-idft1p6d	399	21	bp	bp	NNS
cord-022053-idft1p6d	399	22	)	)	-RRB-
cord-022053-idft1p6d	399	23	reads	read	VBZ
cord-022053-idft1p6d	399	24	.	.	.
cord-022053-idft1p6d	400	1	For	for	IN
cord-022053-idft1p6d	400	2	excellent	excellent	JJ
cord-022053-idft1p6d	400	3	reviews	review	NNS
cord-022053-idft1p6d	400	4	see	see	VBP
cord-022053-idft1p6d	400	5	articles	article	NNS
cord-022053-idft1p6d	400	6	provided	provide	VBN
cord-022053-idft1p6d	400	7	in	in	IN
cord-022053-idft1p6d	400	8	the	the	DT
cord-022053-idft1p6d	400	9	reference	reference	NN
cord-022053-idft1p6d	400	10	list	list	NN
cord-022053-idft1p6d	400	11	.	.	.
cord-022053-idft1p6d	401	1	149	149	CD
cord-022053-idft1p6d	401	2	,	,	,
cord-022053-idft1p6d	401	3	150	150	CD
cord-022053-idft1p6d	402	1	The	the	DT
cord-022053-idft1p6d	402	2	advent	advent	NN
cord-022053-idft1p6d	402	3	of	of	IN
cord-022053-idft1p6d	402	4	NGS	NGS	NNP
cord-022053-idft1p6d	402	5	was	be	VBD
cord-022053-idft1p6d	402	6	a	a	DT
cord-022053-idft1p6d	402	7	groundbreaking	groundbreaking	JJ
cord-022053-idft1p6d	402	8	event	event	NN
cord-022053-idft1p6d	402	9	in	in	IN
cord-022053-idft1p6d	402	10	clinical	clinical	JJ
cord-022053-idft1p6d	402	11	medicine	medicine	NN
cord-022053-idft1p6d	402	12	and	and	CC
cord-022053-idft1p6d	402	13	is	be	VBZ
cord-022053-idft1p6d	402	14	a	a	DT
cord-022053-idft1p6d	402	15	key	key	JJ
cord-022053-idft1p6d	402	16	component	component	NN
cord-022053-idft1p6d	402	17	of	of	IN
cord-022053-idft1p6d	402	18	initiatives	initiative	NNS
cord-022053-idft1p6d	402	19	for	for	IN
cord-022053-idft1p6d	402	20	"	"	``
cord-022053-idft1p6d	402	21	precision	precision	NN
cord-022053-idft1p6d	402	22	medicine	medicine	NN
cord-022053-idft1p6d	402	23	"	"	''
cord-022053-idft1p6d	402	24	for	for	IN
cord-022053-idft1p6d	402	25	cancer	cancer	NN
cord-022053-idft1p6d	402	26	.	.	.
cord-022053-idft1p6d	403	1	Beyond	beyond	IN
cord-022053-idft1p6d	403	2	human	human	JJ
cord-022053-idft1p6d	403	3	genomic	genomic	JJ
cord-022053-idft1p6d	403	4	analysis	analysis	NN
cord-022053-idft1p6d	403	5	,	,	,
cord-022053-idft1p6d	403	6	NGS	NGS	NNP
cord-022053-idft1p6d	403	7	has	have	VBZ
cord-022053-idft1p6d	403	8	also	also	RB
cord-022053-idft1p6d	403	9	had	have	VBN
cord-022053-idft1p6d	403	10	a	a	DT
cord-022053-idft1p6d	403	11	tremendous	tremendous	JJ
cord-022053-idft1p6d	403	12	influence	influence	NN
cord-022053-idft1p6d	403	13	on	on	IN
cord-022053-idft1p6d	403	14	clinical	clinical	JJ
cord-022053-idft1p6d	403	15	microbiology	microbiology	NN
cord-022053-idft1p6d	403	16	that	that	WDT
cord-022053-idft1p6d	403	17	extends	extend	VBZ
cord-022053-idft1p6d	403	18	from	from	IN
cord-022053-idft1p6d	403	19	infectious	infectious	JJ
cord-022053-idft1p6d	403	20	disease	disease	NN
cord-022053-idft1p6d	403	21	testing	testing	NN
cord-022053-idft1p6d	403	22	and	and	CC
cord-022053-idft1p6d	403	23	epidemiology	epidemiology	NN
cord-022053-idft1p6d	403	24	to	to	IN
cord-022053-idft1p6d	403	25	analysis	analysis	NN
cord-022053-idft1p6d	403	26	of	of	IN
cord-022053-idft1p6d	403	27	the	the	DT
cord-022053-idft1p6d	403	28	human	human	JJ
cord-022053-idft1p6d	403	29	microbiome	microbiome	NN
cord-022053-idft1p6d	403	30	in	in	IN
cord-022053-idft1p6d	403	31	health	health	NN
cord-022053-idft1p6d	403	32	,	,	,
cord-022053-idft1p6d	403	33	disease	disease	NN
cord-022053-idft1p6d	403	34	,	,	,
cord-022053-idft1p6d	403	35	and	and	CC
cord-022053-idft1p6d	403	36	intervention	intervention	NN
cord-022053-idft1p6d	403	37	.	.	.
cord-022053-idft1p6d	404	1	[	[	-LRB-
cord-022053-idft1p6d	404	2	151	151	CD
cord-022053-idft1p6d	404	3	]	]	-RRB-
cord-022053-idft1p6d	404	4	[	[	-LRB-
cord-022053-idft1p6d	404	5	152	152	CD
cord-022053-idft1p6d	404	6	]	]	-RRB-
cord-022053-idft1p6d	404	7	[	[	-LRB-
cord-022053-idft1p6d	404	8	153	153	CD
cord-022053-idft1p6d	404	9	]	]	-RRB-
cord-022053-idft1p6d	405	1	Within	within	IN
cord-022053-idft1p6d	405	2	the	the	DT
cord-022053-idft1p6d	405	3	diagnostic	diagnostic	JJ
cord-022053-idft1p6d	405	4	clinical	clinical	JJ
cord-022053-idft1p6d	405	5	microbiology	microbiology	NN
cord-022053-idft1p6d	405	6	laboratory	laboratory	NN
cord-022053-idft1p6d	405	7	,	,	,
cord-022053-idft1p6d	405	8	NGS	NGS	NNP
cord-022053-idft1p6d	405	9	of	of	IN
cord-022053-idft1p6d	405	10	microbial	microbial	JJ
cord-022053-idft1p6d	405	11	whole	whole	JJ
cord-022053-idft1p6d	405	12	genomes	genome	NNS
cord-022053-idft1p6d	405	13	has	have	VBZ
cord-022053-idft1p6d	405	14	been	be	VBN
cord-022053-idft1p6d	405	15	applied	apply	VBN
cord-022053-idft1p6d	405	16	as	as	IN
cord-022053-idft1p6d	405	17	an	an	DT
cord-022053-idft1p6d	405	18	alternative	alternative	NN
cord-022053-idft1p6d	405	19	to	to	IN
cord-022053-idft1p6d	405	20	traditional	traditional	JJ
cord-022053-idft1p6d	405	21	methods	method	NNS
cord-022053-idft1p6d	405	22	,	,	,
cord-022053-idft1p6d	405	23	such	such	JJ
cord-022053-idft1p6d	405	24	as	as	IN
cord-022053-idft1p6d	405	25	pulsed	pulse	VBN
cord-022053-idft1p6d	405	26	-	-	HYPH
cord-022053-idft1p6d	405	27	field	field	NN
cord-022053-idft1p6d	405	28	gel	gel	NN
cord-022053-idft1p6d	405	29	electrophoresis	electrophoresis	NN
cord-022053-idft1p6d	405	30	,	,	,
cord-022053-idft1p6d	405	31	for	for	IN
cord-022053-idft1p6d	405	32	clonality	clonality	NN
cord-022053-idft1p6d	405	33	analysis	analysis	NN
cord-022053-idft1p6d	405	34	in	in	IN
cord-022053-idft1p6d	405	35	outbreak	outbreak	NN
cord-022053-idft1p6d	405	36	tracking	tracking	NN
cord-022053-idft1p6d	405	37	.	.	.
cord-022053-idft1p6d	406	1	154	154	CD
cord-022053-idft1p6d	407	1	The	the	DT
cord-022053-idft1p6d	407	2	refinement	refinement	NN
cord-022053-idft1p6d	407	3	made	make	VBD
cord-022053-idft1p6d	407	4	possible	possible	JJ
cord-022053-idft1p6d	407	5	with	with	IN
cord-022053-idft1p6d	407	6	total	total	JJ
cord-022053-idft1p6d	407	7	chromosomal	chromosomal	JJ
cord-022053-idft1p6d	407	8	single	single	JJ
cord-022053-idft1p6d	407	9	-	-	HYPH
cord-022053-idft1p6d	407	10	nucleotide	nucleotide	NN
cord-022053-idft1p6d	407	11	polymorphism	polymorphism	NN
cord-022053-idft1p6d	407	12	analysis	analysis	NN
cord-022053-idft1p6d	407	13	,	,	,
cord-022053-idft1p6d	407	14	for	for	IN
cord-022053-idft1p6d	407	15	example	example	NN
cord-022053-idft1p6d	407	16	,	,	,
cord-022053-idft1p6d	407	17	allowed	allow	VBD
cord-022053-idft1p6d	407	18	one	one	CD
cord-022053-idft1p6d	407	19	group	group	NN
cord-022053-idft1p6d	407	20	to	to	TO
cord-022053-idft1p6d	407	21	assess	assess	VB
cord-022053-idft1p6d	407	22	the	the	DT
cord-022053-idft1p6d	407	23	spread	spread	NN
cord-022053-idft1p6d	407	24	of	of	IN
cord-022053-idft1p6d	407	25	variants	variant	NNS
cord-022053-idft1p6d	407	26	of	of	IN
cord-022053-idft1p6d	407	27	a	a	DT
cord-022053-idft1p6d	407	28	colonizing	colonize	VBG
cord-022053-idft1p6d	407	29	population	population	NN
cord-022053-idft1p6d	407	30	of	of	IN
cord-022053-idft1p6d	407	31	carbapenem	carbapenem	NNP
cord-022053-idft1p6d	407	32	-	-	HYPH
cord-022053-idft1p6d	407	33	resistant	resistant	JJ
cord-022053-idft1p6d	407	34	K.	K.	NNP
cord-022053-idft1p6d	407	35	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	407	36	from	from	IN
cord-022053-idft1p6d	407	37	one	one	CD
cord-022053-idft1p6d	407	38	patient	patient	NN
cord-022053-idft1p6d	407	39	to	to	IN
cord-022053-idft1p6d	407	40	several	several	JJ
cord-022053-idft1p6d	407	41	others	other	NNS
cord-022053-idft1p6d	407	42	in	in	IN
cord-022053-idft1p6d	407	43	multiple	multiple	JJ
cord-022053-idft1p6d	407	44	transmission	transmission	NN
cord-022053-idft1p6d	407	45	events	event	NNS
cord-022053-idft1p6d	407	46	.	.	.
cord-022053-idft1p6d	408	1	These	these	DT
cord-022053-idft1p6d	408	2	variants	variant	NNS
cord-022053-idft1p6d	408	3	were	be	VBD
cord-022053-idft1p6d	408	4	differentiated	differentiate	VBN
cord-022053-idft1p6d	408	5	from	from	IN
cord-022053-idft1p6d	408	6	each	each	DT
cord-022053-idft1p6d	408	7	other	other	JJ
cord-022053-idft1p6d	408	8	by	by	IN
cord-022053-idft1p6d	408	9	fewer	few	JJR
cord-022053-idft1p6d	408	10	than	than	IN
cord-022053-idft1p6d	408	11	a	a	DT
cord-022053-idft1p6d	408	12	dozen	dozen	NN
cord-022053-idft1p6d	408	13	nucleotides	nucleotide	NNS
cord-022053-idft1p6d	408	14	.	.	.
cord-022053-idft1p6d	409	1	155	155	CD
cord-022053-idft1p6d	410	1	Other	other	JJ
cord-022053-idft1p6d	410	2	applications	application	NNS
cord-022053-idft1p6d	410	3	that	that	WDT
cord-022053-idft1p6d	410	4	are	be	VBP
cord-022053-idft1p6d	410	5	becoming	become	VBG
cord-022053-idft1p6d	410	6	more	more	RBR
cord-022053-idft1p6d	410	7	and	and	CC
cord-022053-idft1p6d	410	8	more	more	RBR
cord-022053-idft1p6d	410	9	routine	routine	JJ
cord-022053-idft1p6d	410	10	include	include	VBP
cord-022053-idft1p6d	410	11	the	the	DT
cord-022053-idft1p6d	410	12	characterization	characterization	NN
cord-022053-idft1p6d	410	13	of	of	IN
cord-022053-idft1p6d	410	14	unusual	unusual	JJ
cord-022053-idft1p6d	410	15	pathogens	pathogen	NNS
cord-022053-idft1p6d	410	16	,	,	,
cord-022053-idft1p6d	410	17	the	the	DT
cord-022053-idft1p6d	410	18	tracking	tracking	NN
cord-022053-idft1p6d	410	19	of	of	IN
cord-022053-idft1p6d	410	20	antibiotic	antibiotic	JJ
cord-022053-idft1p6d	410	21	resistance	resistance	NN
cord-022053-idft1p6d	410	22	genes	gene	NNS
cord-022053-idft1p6d	410	23	,	,	,
cord-022053-idft1p6d	410	24	and	and	CC
cord-022053-idft1p6d	410	25	even	even	RB
cord-022053-idft1p6d	410	26	the	the	DT
cord-022053-idft1p6d	410	27	characterization	characterization	NN
cord-022053-idft1p6d	410	28	of	of	IN
cord-022053-idft1p6d	410	29	the	the	DT
cord-022053-idft1p6d	410	30	plasmids	plasmid	NNS
cord-022053-idft1p6d	410	31	that	that	WDT
cord-022053-idft1p6d	410	32	carry	carry	VBP
cord-022053-idft1p6d	410	33	them	-PRON-	PRP
cord-022053-idft1p6d	410	34	through	through	IN
cord-022053-idft1p6d	410	35	horizontal	horizontal	JJ
cord-022053-idft1p6d	410	36	gene	gene	NN
cord-022053-idft1p6d	410	37	transfer	transfer	NN
cord-022053-idft1p6d	410	38	.	.	.
cord-022053-idft1p6d	411	1	[	[	-LRB-
cord-022053-idft1p6d	411	2	156	156	CD
cord-022053-idft1p6d	411	3	]	]	-RRB-
cord-022053-idft1p6d	411	4	[	[	-LRB-
cord-022053-idft1p6d	411	5	157	157	CD
cord-022053-idft1p6d	411	6	]	]	-RRB-
cord-022053-idft1p6d	411	7	[	[	-LRB-
cord-022053-idft1p6d	411	8	158	158	CD
cord-022053-idft1p6d	411	9	]	]	-RRB-
cord-022053-idft1p6d	411	10	[	[	-LRB-
cord-022053-idft1p6d	411	11	159	159	CD
cord-022053-idft1p6d	411	12	]	]	-RRB-
cord-022053-idft1p6d	412	1	Although	although	IN
cord-022053-idft1p6d	412	2	not	not	RB
cord-022053-idft1p6d	412	3	yet	yet	RB
cord-022053-idft1p6d	412	4	routine	routine	JJ
cord-022053-idft1p6d	412	5	,	,	,
cord-022053-idft1p6d	412	6	NGS	NGS	NNP
cord-022053-idft1p6d	412	7	has	have	VBZ
cord-022053-idft1p6d	412	8	been	be	VBN
cord-022053-idft1p6d	412	9	used	use	VBN
cord-022053-idft1p6d	412	10	to	to	TO
cord-022053-idft1p6d	412	11	diagnose	diagnose	VB
cord-022053-idft1p6d	412	12	infections	infection	NNS
cord-022053-idft1p6d	412	13	directly	directly	RB
cord-022053-idft1p6d	412	14	from	from	IN
cord-022053-idft1p6d	412	15	primary	primary	JJ
cord-022053-idft1p6d	412	16	samples	sample	NNS
cord-022053-idft1p6d	412	17	in	in	IN
cord-022053-idft1p6d	412	18	cases	case	NNS
cord-022053-idft1p6d	412	19	in	in	IN
cord-022053-idft1p6d	412	20	which	which	WDT
cord-022053-idft1p6d	412	21	all	all	DT
cord-022053-idft1p6d	412	22	conventional	conventional	JJ
cord-022053-idft1p6d	412	23	techniques	technique	NNS
cord-022053-idft1p6d	412	24	have	have	VBP
cord-022053-idft1p6d	412	25	failed	fail	VBN
cord-022053-idft1p6d	412	26	.	.	.
cord-022053-idft1p6d	413	1	160	160	CD
cord-022053-idft1p6d	414	1	In	in	IN
cord-022053-idft1p6d	414	2	one	one	CD
cord-022053-idft1p6d	414	3	report	report	NN
cord-022053-idft1p6d	414	4	,	,	,
cord-022053-idft1p6d	414	5	after	after	IN
cord-022053-idft1p6d	414	6	4	4	CD
cord-022053-idft1p6d	414	7	months	month	NNS
cord-022053-idft1p6d	414	8	of	of	IN
cord-022053-idft1p6d	414	9	progressive	progressive	JJ
cord-022053-idft1p6d	414	10	neurologic	neurologic	JJ
cord-022053-idft1p6d	414	11	symptoms	symptom	NNS
cord-022053-idft1p6d	414	12	and	and	CC
cord-022053-idft1p6d	414	13	a	a	DT
cord-022053-idft1p6d	414	14	thorough	thorough	JJ
cord-022053-idft1p6d	414	15	but	but	CC
cord-022053-idft1p6d	414	16	unrevealing	unrevealing	JJ
cord-022053-idft1p6d	414	17	infectious	infectious	JJ
cord-022053-idft1p6d	414	18	disease	disease	NN
cord-022053-idft1p6d	414	19	workup	workup	NN
cord-022053-idft1p6d	414	20	,	,	,
cord-022053-idft1p6d	414	21	NGS	NGS	NNP
cord-022053-idft1p6d	414	22	was	be	VBD
cord-022053-idft1p6d	414	23	finally	finally	RB
cord-022053-idft1p6d	414	24	able	able	JJ
cord-022053-idft1p6d	414	25	to	to	TO
cord-022053-idft1p6d	414	26	diagnose	diagnose	VB
cord-022053-idft1p6d	414	27	a	a	DT
cord-022053-idft1p6d	414	28	case	case	NN
cord-022053-idft1p6d	414	29	of	of	IN
cord-022053-idft1p6d	414	30	neuroleptospirosis	neuroleptospirosis	NN
cord-022053-idft1p6d	414	31	directly	directly	RB
cord-022053-idft1p6d	414	32	from	from	IN
cord-022053-idft1p6d	414	33	the	the	DT
cord-022053-idft1p6d	414	34	CSF	CSF	NNP
cord-022053-idft1p6d	414	35	of	of	IN
cord-022053-idft1p6d	414	36	a	a	DT
cord-022053-idft1p6d	414	37	14-year	14-year	JJ
cord-022053-idft1p6d	414	38	-	-	HYPH
cord-022053-idft1p6d	414	39	old	old	JJ
cord-022053-idft1p6d	414	40	boy	boy	NN
cord-022053-idft1p6d	414	41	.	.	.
cord-022053-idft1p6d	415	1	161	161	CD
cord-022053-idft1p6d	416	1	In	in	IN
cord-022053-idft1p6d	416	2	addition	addition	NN
cord-022053-idft1p6d	416	3	to	to	IN
cord-022053-idft1p6d	416	4	the	the	DT
cord-022053-idft1p6d	416	5	detection	detection	NN
cord-022053-idft1p6d	416	6	and	and	CC
cord-022053-idft1p6d	416	7	characterization	characterization	NN
cord-022053-idft1p6d	416	8	of	of	IN
cord-022053-idft1p6d	416	9	pathogens	pathogen	NNS
cord-022053-idft1p6d	416	10	,	,	,
cord-022053-idft1p6d	416	11	NGS	NGS	NNP
cord-022053-idft1p6d	416	12	has	have	VBZ
cord-022053-idft1p6d	416	13	also	also	RB
cord-022053-idft1p6d	416	14	proven	prove	VBN
cord-022053-idft1p6d	416	15	to	to	TO
cord-022053-idft1p6d	416	16	be	be	VB
cord-022053-idft1p6d	416	17	an	an	DT
cord-022053-idft1p6d	416	18	invaluable	invaluable	JJ
cord-022053-idft1p6d	416	19	tool	tool	NN
cord-022053-idft1p6d	416	20	for	for	IN
cord-022053-idft1p6d	416	21	the	the	DT
cord-022053-idft1p6d	416	22	characterization	characterization	NN
cord-022053-idft1p6d	416	23	of	of	IN
cord-022053-idft1p6d	416	24	the	the	DT
cord-022053-idft1p6d	416	25	human	human	JJ
cord-022053-idft1p6d	416	26	microbiome	microbiome	NN
cord-022053-idft1p6d	416	27	.	.	.
cord-022053-idft1p6d	417	1	The	the	DT
cord-022053-idft1p6d	417	2	influence	influence	NN
cord-022053-idft1p6d	417	3	of	of	IN
cord-022053-idft1p6d	417	4	the	the	DT
cord-022053-idft1p6d	417	5	microbiome	microbiome	NN
cord-022053-idft1p6d	417	6	on	on	IN
cord-022053-idft1p6d	417	7	human	human	JJ
cord-022053-idft1p6d	417	8	health	health	NN
cord-022053-idft1p6d	417	9	and	and	CC
cord-022053-idft1p6d	417	10	disease	disease	NN
cord-022053-idft1p6d	417	11	has	have	VBZ
cord-022053-idft1p6d	417	12	become	become	VBN
cord-022053-idft1p6d	417	13	progressively	progressively	RB
cord-022053-idft1p6d	417	14	more	more	RBR
cord-022053-idft1p6d	417	15	established	established	JJ
cord-022053-idft1p6d	417	16	.	.	.
cord-022053-idft1p6d	418	1	Examples	example	NNS
cord-022053-idft1p6d	418	2	are	be	VBP
cord-022053-idft1p6d	418	3	many	many	JJ
cord-022053-idft1p6d	418	4	and	and	CC
cord-022053-idft1p6d	418	5	include	include	VBP
cord-022053-idft1p6d	418	6	the	the	DT
cord-022053-idft1p6d	418	7	development	development	NN
cord-022053-idft1p6d	418	8	of	of	IN
cord-022053-idft1p6d	418	9	obesity	obesity	NN
cord-022053-idft1p6d	418	10	,	,	,
cord-022053-idft1p6d	418	11	the	the	DT
cord-022053-idft1p6d	418	12	metabolism	metabolism	NN
cord-022053-idft1p6d	418	13	of	of	IN
cord-022053-idft1p6d	418	14	therapeutic	therapeutic	JJ
cord-022053-idft1p6d	418	15	drugs	drug	NNS
cord-022053-idft1p6d	418	16	,	,	,
cord-022053-idft1p6d	418	17	and	and	CC
cord-022053-idft1p6d	418	18	the	the	DT
cord-022053-idft1p6d	418	19	development	development	NN
cord-022053-idft1p6d	418	20	of	of	IN
cord-022053-idft1p6d	418	21	inflammatory	inflammatory	JJ
cord-022053-idft1p6d	418	22	bowel	bowel	NN
cord-022053-idft1p6d	418	23	disease	disease	NN
cord-022053-idft1p6d	418	24	.	.	.
cord-022053-idft1p6d	419	1	[	[	-LRB-
cord-022053-idft1p6d	419	2	162	162	CD
cord-022053-idft1p6d	419	3	]	]	-RRB-
cord-022053-idft1p6d	419	4	[	[	-LRB-
cord-022053-idft1p6d	419	5	163	163	CD
cord-022053-idft1p6d	419	6	]	]	-RRB-
cord-022053-idft1p6d	419	7	[	[	-LRB-
cord-022053-idft1p6d	419	8	164	164	CD
cord-022053-idft1p6d	419	9	]	]	-RRB-
cord-022053-idft1p6d	420	1	The	the	DT
cord-022053-idft1p6d	420	2	two	two	CD
cord-022053-idft1p6d	420	3	most	most	RBS
cord-022053-idft1p6d	420	4	common	common	JJ
cord-022053-idft1p6d	420	5	ways	way	NNS
cord-022053-idft1p6d	420	6	of	of	IN
cord-022053-idft1p6d	420	7	assessing	assess	VBG
cord-022053-idft1p6d	420	8	the	the	DT
cord-022053-idft1p6d	420	9	microbiome	microbiome	NN
cord-022053-idft1p6d	420	10	are	be	VBP
cord-022053-idft1p6d	420	11	by	by	IN
cord-022053-idft1p6d	420	12	16S	16S	NNP
cord-022053-idft1p6d	420	13	rRNA	rRNA	NNP
cord-022053-idft1p6d	420	14	or	or	CC
cord-022053-idft1p6d	420	15	shotgun	shotgun	NN
cord-022053-idft1p6d	420	16	metagenomics	metagenomic	NNS
cord-022053-idft1p6d	420	17	.	.	.
cord-022053-idft1p6d	421	1	NGS	NGS	NNP
cord-022053-idft1p6d	421	2	16S	16S	NNP
cord-022053-idft1p6d	421	3	analysis	analysis	NN
cord-022053-idft1p6d	421	4	entails	entail	VBZ
cord-022053-idft1p6d	421	5	sequencing	sequence	VBG
cord-022053-idft1p6d	421	6	one	one	CD
cord-022053-idft1p6d	421	7	portion	portion	NN
cord-022053-idft1p6d	421	8	of	of	IN
cord-022053-idft1p6d	421	9	16S	16S	NNP
cord-022053-idft1p6d	421	10	rRNA	rrna	NN
cord-022053-idft1p6d	421	11	from	from	IN
cord-022053-idft1p6d	421	12	a	a	DT
cord-022053-idft1p6d	421	13	mixed	mixed	JJ
cord-022053-idft1p6d	421	14	community	community	NN
cord-022053-idft1p6d	421	15	(	(	-LRB-
cord-022053-idft1p6d	421	16	e.g.	e.g.	RB
cord-022053-idft1p6d	421	17	,	,	,
cord-022053-idft1p6d	421	18	stool	stool	VB
cord-022053-idft1p6d	421	19	sample	sample	NN
cord-022053-idft1p6d	421	20	)	)	-RRB-
cord-022053-idft1p6d	421	21	with	with	IN
cord-022053-idft1p6d	421	22	subsequent	subsequent	JJ
cord-022053-idft1p6d	421	23	clustering	clustering	NN
cord-022053-idft1p6d	421	24	of	of	IN
cord-022053-idft1p6d	421	25	sequences	sequence	NNS
cord-022053-idft1p6d	421	26	either	either	CC
cord-022053-idft1p6d	421	27	against	against	IN
cord-022053-idft1p6d	421	28	a	a	DT
cord-022053-idft1p6d	421	29	reference	reference	NN
cord-022053-idft1p6d	421	30	dataset	dataset	NN
cord-022053-idft1p6d	421	31	or	or	CC
cord-022053-idft1p6d	421	32	into	into	IN
cord-022053-idft1p6d	421	33	operational	operational	JJ
cord-022053-idft1p6d	421	34	taxonomic	taxonomic	JJ
cord-022053-idft1p6d	421	35	units	unit	NNS
cord-022053-idft1p6d	421	36	(	(	-LRB-
cord-022053-idft1p6d	421	37	OTUs	OTUs	NNPS
cord-022053-idft1p6d	421	38	)	)	-RRB-
cord-022053-idft1p6d	421	39	.	.	.
cord-022053-idft1p6d	422	1	It	-PRON-	PRP
cord-022053-idft1p6d	422	2	gives	give	VBZ
cord-022053-idft1p6d	422	3	a	a	DT
cord-022053-idft1p6d	422	4	picture	picture	NN
cord-022053-idft1p6d	422	5	of	of	IN
cord-022053-idft1p6d	422	6	taxonomic	taxonomic	JJ
cord-022053-idft1p6d	422	7	diversity	diversity	NN
cord-022053-idft1p6d	422	8	in	in	IN
cord-022053-idft1p6d	422	9	a	a	DT
cord-022053-idft1p6d	422	10	sample	sample	NN
cord-022053-idft1p6d	422	11	and	and	CC
cord-022053-idft1p6d	422	12	allows	allow	VBZ
cord-022053-idft1p6d	422	13	for	for	IN
cord-022053-idft1p6d	422	14	the	the	DT
cord-022053-idft1p6d	422	15	analysis	analysis	NN
cord-022053-idft1p6d	422	16	of	of	IN
cord-022053-idft1p6d	422	17	changing	change	VBG
cord-022053-idft1p6d	422	18	taxonomic	taxonomic	JJ
cord-022053-idft1p6d	422	19	composition	composition	NN
cord-022053-idft1p6d	422	20	in	in	IN
cord-022053-idft1p6d	422	21	the	the	DT
cord-022053-idft1p6d	422	22	face	face	NN
cord-022053-idft1p6d	422	23	of	of	IN
cord-022053-idft1p6d	422	24	various	various	JJ
cord-022053-idft1p6d	422	25	perturbations	perturbation	NNS
cord-022053-idft1p6d	422	26	and	and	CC
cord-022053-idft1p6d	422	27	interventions	intervention	NNS
cord-022053-idft1p6d	422	28	,	,	,
cord-022053-idft1p6d	422	29	such	such	JJ
cord-022053-idft1p6d	422	30	as	as	IN
cord-022053-idft1p6d	422	31	antibiotic	antibiotic	JJ
cord-022053-idft1p6d	422	32	administration	administration	NN
cord-022053-idft1p6d	422	33	.	.	.
cord-022053-idft1p6d	423	1	Shotgun	shotgun	NN
cord-022053-idft1p6d	423	2	metagenomics	metagenomic	NNS
cord-022053-idft1p6d	423	3	refers	refer	VBZ
cord-022053-idft1p6d	423	4	to	to	IN
cord-022053-idft1p6d	423	5	the	the	DT
cord-022053-idft1p6d	423	6	sequencing	sequencing	NN
cord-022053-idft1p6d	423	7	of	of	IN
cord-022053-idft1p6d	423	8	total	total	JJ
cord-022053-idft1p6d	423	9	DNA	dna	NN
cord-022053-idft1p6d	423	10	from	from	IN
cord-022053-idft1p6d	423	11	a	a	DT
cord-022053-idft1p6d	423	12	mixed	mixed	JJ
cord-022053-idft1p6d	423	13	community	community	NN
cord-022053-idft1p6d	423	14	.	.	.
cord-022053-idft1p6d	424	1	This	this	DT
cord-022053-idft1p6d	424	2	technique	technique	NN
cord-022053-idft1p6d	424	3	allows	allow	VBZ
cord-022053-idft1p6d	424	4	for	for	IN
cord-022053-idft1p6d	424	5	more	more	RBR
cord-022053-idft1p6d	424	6	refined	refined	JJ
cord-022053-idft1p6d	424	7	organism	organism	NN
cord-022053-idft1p6d	424	8	identification	identification	NN
cord-022053-idft1p6d	424	9	and	and	CC
cord-022053-idft1p6d	424	10	an	an	DT
cord-022053-idft1p6d	424	11	analysis	analysis	NN
cord-022053-idft1p6d	424	12	of	of	IN
cord-022053-idft1p6d	424	13	biochemical	biochemical	JJ
cord-022053-idft1p6d	424	14	pathways	pathway	NNS
cord-022053-idft1p6d	424	15	,	,	,
cord-022053-idft1p6d	424	16	resistance	resistance	NN
cord-022053-idft1p6d	424	17	genes	gene	NNS
cord-022053-idft1p6d	424	18	,	,	,
cord-022053-idft1p6d	424	19	etc	etc	FW
cord-022053-idft1p6d	424	20	.	.	.
cord-022053-idft1p6d	425	1	but	but	CC
cord-022053-idft1p6d	425	2	requires	require	VBZ
cord-022053-idft1p6d	425	3	a	a	DT
cord-022053-idft1p6d	425	4	greater	great	JJR
cord-022053-idft1p6d	425	5	amount	amount	NN
cord-022053-idft1p6d	425	6	of	of	IN
cord-022053-idft1p6d	425	7	raw	raw	JJ
cord-022053-idft1p6d	425	8	sequence	sequence	NN
cord-022053-idft1p6d	425	9	.	.	.
cord-022053-idft1p6d	426	1	165	165	CD
cord-022053-idft1p6d	426	2	,	,	,
cord-022053-idft1p6d	426	3	166	166	CD
cord-022053-idft1p6d	426	4	(	(	-LRB-
cord-022053-idft1p6d	426	5	IDNS	IDNS	NNP
cord-022053-idft1p6d	426	6	)	)	-RRB-
cord-022053-idft1p6d	426	7	(	(	-LRB-
cord-022053-idft1p6d	426	8	SmartGene	SmartGene	NNP
cord-022053-idft1p6d	426	9	,	,	,
cord-022053-idft1p6d	426	10	Raleigh	Raleigh	NNP
cord-022053-idft1p6d	426	11	,	,	,
cord-022053-idft1p6d	426	12	North	North	NNP
cord-022053-idft1p6d	426	13	Carolina	Carolina	NNP
cord-022053-idft1p6d	426	14	)	)	-RRB-
cord-022053-idft1p6d	426	15	,	,	,
cord-022053-idft1p6d	426	16	and	and	CC
cord-022053-idft1p6d	426	17	MicroSEQ	microseq	NN
cord-022053-idft1p6d	426	18	(	(	-LRB-
cord-022053-idft1p6d	426	19	Applied	Applied	NNP
cord-022053-idft1p6d	426	20	Biosystems	Biosystems	NNP
cord-022053-idft1p6d	426	21	,	,	,
cord-022053-idft1p6d	426	22	Thermo	Thermo	NNP
cord-022053-idft1p6d	426	23	-	-	HYPH
cord-022053-idft1p6d	426	24	Fisher	Fisher	NNP
cord-022053-idft1p6d	426	25	,	,	,
cord-022053-idft1p6d	426	26	Waltham	Waltham	NNP
cord-022053-idft1p6d	426	27	,	,	,
cord-022053-idft1p6d	426	28	Massachusetts	Massachusetts	NNP
cord-022053-idft1p6d	426	29	)	)	-RRB-
cord-022053-idft1p6d	426	30	.	.	.
cord-022053-idft1p6d	427	1	The	the	DT
cord-022053-idft1p6d	427	2	first	first	JJ
cord-022053-idft1p6d	427	3	two	two	CD
cord-022053-idft1p6d	427	4	products	product	NNS
cord-022053-idft1p6d	427	5	are	be	VBP
cord-022053-idft1p6d	427	6	solely	solely	RB
cord-022053-idft1p6d	427	7	bioinformatic	bioinformatic	JJ
cord-022053-idft1p6d	427	8	reference	reference	NN
cord-022053-idft1p6d	427	9	solutions	solution	NNS
cord-022053-idft1p6d	427	10	.	.	.
cord-022053-idft1p6d	428	1	The	the	DT
cord-022053-idft1p6d	428	2	last	last	JJ
cord-022053-idft1p6d	428	3	includes	include	VBZ
cord-022053-idft1p6d	428	4	both	both	DT
cord-022053-idft1p6d	428	5	reagents	reagent	NNS
cord-022053-idft1p6d	428	6	and	and	CC
cord-022053-idft1p6d	428	7	access	access	NN
cord-022053-idft1p6d	428	8	to	to	IN
cord-022053-idft1p6d	428	9	a	a	DT
cord-022053-idft1p6d	428	10	curated	curate	VBN
cord-022053-idft1p6d	428	11	database	database	NN
cord-022053-idft1p6d	428	12	.	.	.
cord-022053-idft1p6d	429	1	None	none	NN
cord-022053-idft1p6d	429	2	of	of	IN
cord-022053-idft1p6d	429	3	these	these	DT
cord-022053-idft1p6d	429	4	products	product	NNS
cord-022053-idft1p6d	429	5	are	be	VBP
cord-022053-idft1p6d	429	6	FDA	FDA	NNP
cord-022053-idft1p6d	429	7	approved	approve	VBN
cord-022053-idft1p6d	429	8	.	.	.
cord-022053-idft1p6d	430	1	The	the	DT
cord-022053-idft1p6d	430	2	Clinical	Clinical	NNP
cord-022053-idft1p6d	430	3	and	and	CC
cord-022053-idft1p6d	430	4	Laboratory	Laboratory	NNP
cord-022053-idft1p6d	430	5	Standards	Standards	NNPS
cord-022053-idft1p6d	430	6	Institute	Institute	NNP
cord-022053-idft1p6d	430	7	(	(	-LRB-
cord-022053-idft1p6d	430	8	CLSI	CLSI	NNP
cord-022053-idft1p6d	430	9	)	)	-RRB-
cord-022053-idft1p6d	430	10	has	have	VBZ
cord-022053-idft1p6d	430	11	published	publish	VBN
cord-022053-idft1p6d	430	12	guidelines	guideline	NNS
cord-022053-idft1p6d	430	13	for	for	IN
cord-022053-idft1p6d	430	14	the	the	DT
cord-022053-idft1p6d	430	15	identification	identification	NN
cord-022053-idft1p6d	430	16	of	of	IN
cord-022053-idft1p6d	430	17	organisms	organism	NNS
cord-022053-idft1p6d	430	18	by	by	IN
cord-022053-idft1p6d	430	19	nucleic	nucleic	JJ
cord-022053-idft1p6d	430	20	acid	acid	NN
cord-022053-idft1p6d	430	21	sequencing	sequencing	NN
cord-022053-idft1p6d	430	22	in	in	IN
cord-022053-idft1p6d	430	23	which	which	WDT
cord-022053-idft1p6d	430	24	the	the	DT
cord-022053-idft1p6d	430	25	recommended	recommend	VBN
cord-022053-idft1p6d	430	26	percentage	percentage	NN
cord-022053-idft1p6d	430	27	identity	identity	NN
cord-022053-idft1p6d	430	28	to	to	TO
cord-022053-idft1p6d	430	29	make	make	VB
cord-022053-idft1p6d	430	30	a	a	DT
cord-022053-idft1p6d	430	31	match	match	NN
cord-022053-idft1p6d	430	32	and	and	CC
cord-022053-idft1p6d	430	33	guidance	guidance	NN
cord-022053-idft1p6d	430	34	for	for	IN
cord-022053-idft1p6d	430	35	organisms	organism	NNS
cord-022053-idft1p6d	430	36	requiring	require	VBG
cord-022053-idft1p6d	430	37	additional	additional	JJ
cord-022053-idft1p6d	430	38	targets	target	NNS
cord-022053-idft1p6d	430	39	(	(	-LRB-
cord-022053-idft1p6d	430	40	e.g.	e.g.	RB
cord-022053-idft1p6d	430	41	,	,	,
cord-022053-idft1p6d	430	42	rpoB	rpoB	''
cord-022053-idft1p6d	430	43	,	,	,
cord-022053-idft1p6d	430	44	hsp65	hsp65	ADD
cord-022053-idft1p6d	430	45	)	)	-RRB-
cord-022053-idft1p6d	430	46	for	for	IN
cord-022053-idft1p6d	430	47	accurate	accurate	JJ
cord-022053-idft1p6d	430	48	speciation	speciation	NN
cord-022053-idft1p6d	430	49	are	be	VBP
cord-022053-idft1p6d	430	50	laid	lay	VBN
cord-022053-idft1p6d	430	51	forth	forth	RB
cord-022053-idft1p6d	430	52	.	.	.
cord-022053-idft1p6d	431	1	126	126	CD
cord-022053-idft1p6d	432	1	The	the	DT
cord-022053-idft1p6d	432	2	use	use	NN
cord-022053-idft1p6d	432	3	of	of	IN
cord-022053-idft1p6d	432	4	16Sseq	16sseq	CD
cord-022053-idft1p6d	432	5	in	in	IN
cord-022053-idft1p6d	432	6	the	the	DT
cord-022053-idft1p6d	432	7	clinical	clinical	JJ
cord-022053-idft1p6d	432	8	microbiology	microbiology	NN
cord-022053-idft1p6d	432	9	laboratory	laboratory	NN
cord-022053-idft1p6d	432	10	has	have	VBZ
cord-022053-idft1p6d	432	11	been	be	VBN
cord-022053-idft1p6d	432	12	shown	show	VBN
cord-022053-idft1p6d	432	13	to	to	TO
cord-022053-idft1p6d	432	14	be	be	VB
cord-022053-idft1p6d	432	15	particularly	particularly	RB
cord-022053-idft1p6d	432	16	useful	useful	JJ
cord-022053-idft1p6d	432	17	in	in	IN
cord-022053-idft1p6d	432	18	such	such	JJ
cord-022053-idft1p6d	432	19	applications	application	NNS
cord-022053-idft1p6d	432	20	as	as	IN
cord-022053-idft1p6d	432	21	the	the	DT
cord-022053-idft1p6d	432	22	identification	identification	NN
cord-022053-idft1p6d	432	23	of	of	IN
cord-022053-idft1p6d	432	24	unusual	unusual	JJ
cord-022053-idft1p6d	432	25	and/or	and/or	CC
cord-022053-idft1p6d	432	26	slow	slow	RB
cord-022053-idft1p6d	432	27	-	-	HYPH
cord-022053-idft1p6d	432	28	growing	grow	VBG
cord-022053-idft1p6d	432	29	organisms	organism	NNS
cord-022053-idft1p6d	432	30	and	and	CC
cord-022053-idft1p6d	432	31	the	the	DT
cord-022053-idft1p6d	432	32	identification	identification	NN
cord-022053-idft1p6d	432	33	of	of	IN
cord-022053-idft1p6d	432	34	organisms	organism	NNS
cord-022053-idft1p6d	432	35	from	from	IN
cord-022053-idft1p6d	432	36	specimens	specimen	NNS
cord-022053-idft1p6d	432	37	in	in	IN
cord-022053-idft1p6d	432	38	which	which	WDT
cord-022053-idft1p6d	432	39	culture	culture	NN
cord-022053-idft1p6d	432	40	is	be	VBZ
cord-022053-idft1p6d	432	41	not	not	RB
cord-022053-idft1p6d	432	42	possible	possible	JJ
cord-022053-idft1p6d	432	43	or	or	CC
cord-022053-idft1p6d	432	44	has	have	VBZ
cord-022053-idft1p6d	432	45	failed	fail	VBN
cord-022053-idft1p6d	432	46	,	,	,
cord-022053-idft1p6d	432	47	such	such	JJ
cord-022053-idft1p6d	432	48	as	as	IN
cord-022053-idft1p6d	432	49	in	in	IN
cord-022053-idft1p6d	432	50	specimens	specimen	NNS
cord-022053-idft1p6d	432	51	from	from	IN
cord-022053-idft1p6d	432	52	antibiotictreated	antibiotictreated	JJ
cord-022053-idft1p6d	432	53	patients	patient	NNS
cord-022053-idft1p6d	432	54	and	and	CC
cord-022053-idft1p6d	432	55	fixed	fix	VBN
cord-022053-idft1p6d	432	56	specimens	specimen	NNS
cord-022053-idft1p6d	432	57	.	.	.
cord-022053-idft1p6d	433	1	[	[	-LRB-
cord-022053-idft1p6d	433	2	127	127	CD
cord-022053-idft1p6d	433	3	]	]	-RRB-
cord-022053-idft1p6d	433	4	[	[	-LRB-
cord-022053-idft1p6d	433	5	128	128	CD
cord-022053-idft1p6d	433	6	]	]	-RRB-
cord-022053-idft1p6d	433	7	[	[	-LRB-
cord-022053-idft1p6d	433	8	129	129	CD
cord-022053-idft1p6d	433	9	]	]	-RRB-
cord-022053-idft1p6d	434	1	[	[	-LRB-
cord-022053-idft1p6d	434	2	130	130	CD
cord-022053-idft1p6d	434	3	]	]	-RRB-
cord-022053-idft1p6d	435	1	For	for	IN
cord-022053-idft1p6d	435	2	example	example	NN
cord-022053-idft1p6d	435	3	,	,	,
cord-022053-idft1p6d	435	4	the	the	DT
cord-022053-idft1p6d	435	5	identification	identification	NN
cord-022053-idft1p6d	435	6	of	of	IN
cord-022053-idft1p6d	435	7	mycobacterial	mycobacterial	JJ
cord-022053-idft1p6d	435	8	species	specie	NNS
cord-022053-idft1p6d	435	9	identified	identify	VBN
cord-022053-idft1p6d	435	10	by	by	IN
cord-022053-idft1p6d	435	11	acid	acid	NN
cord-022053-idft1p6d	435	12	-	-	HYPH
cord-022053-idft1p6d	435	13	fast	fast	JJ
cord-022053-idft1p6d	435	14	staining	staining	NN
cord-022053-idft1p6d	435	15	of	of	IN
cord-022053-idft1p6d	435	16	FFPE	FFPE	NNP
cord-022053-idft1p6d	435	17	is	be	VBZ
cord-022053-idft1p6d	435	18	a	a	DT
cord-022053-idft1p6d	435	19	commonly	commonly	RB
cord-022053-idft1p6d	435	20	used	use	VBN
cord-022053-idft1p6d	435	21	application	application	NN
cord-022053-idft1p6d	435	22	of	of	IN
cord-022053-idft1p6d	435	23	16S	16S	NNP
cord-022053-idft1p6d	435	24	sequencing	sequencing	NN
cord-022053-idft1p6d	435	25	,	,	,
cord-022053-idft1p6d	435	26	although	although	IN
cord-022053-idft1p6d	435	27	additional	additional	JJ
cord-022053-idft1p6d	435	28	targets	target	NNS
cord-022053-idft1p6d	435	29	,	,	,
cord-022053-idft1p6d	435	30	such	such	JJ
cord-022053-idft1p6d	435	31	as	as	IN
cord-022053-idft1p6d	435	32	IS6110	IS6110	NNS
cord-022053-idft1p6d	435	33	and	and	CC
cord-022053-idft1p6d	435	34	hsp65	hsp65	NNS
cord-022053-idft1p6d	435	35	,	,	,
cord-022053-idft1p6d	435	36	are	be	VBP
cord-022053-idft1p6d	435	37	often	often	RB
cord-022053-idft1p6d	435	38	needed	need	VBN
cord-022053-idft1p6d	435	39	to	to	TO
cord-022053-idft1p6d	435	40	differentiate	differentiate	VB
cord-022053-idft1p6d	435	41	species	specie	NNS
cord-022053-idft1p6d	435	42	.	.	.
cord-022053-idft1p6d	436	1	131	131	CD
cord-022053-idft1p6d	436	2	,	,	,
cord-022053-idft1p6d	436	3	132	132	CD
cord-022053-idft1p6d	436	4	Specimen	Specimen	NNP
cord-022053-idft1p6d	436	5	types	type	NNS
cord-022053-idft1p6d	436	6	most	most	RBS
cord-022053-idft1p6d	436	7	successfully	successfully	RB
cord-022053-idft1p6d	436	8	analyzed	analyze	VBN
cord-022053-idft1p6d	436	9	by	by	IN
cord-022053-idft1p6d	436	10	direct	direct	JJ
cord-022053-idft1p6d	436	11	16Sseq	16sseq	CD
cord-022053-idft1p6d	436	12	include	include	VBP
cord-022053-idft1p6d	436	13	heart	heart	NN
cord-022053-idft1p6d	436	14	valves	valve	NNS
cord-022053-idft1p6d	436	15	,	,	,
cord-022053-idft1p6d	436	16	CSF	CSF	NNP
cord-022053-idft1p6d	436	17	,	,	,
cord-022053-idft1p6d	436	18	and	and	CC
cord-022053-idft1p6d	436	19	synovial	synovial	JJ
cord-022053-idft1p6d	436	20	fluid	fluid	NN
cord-022053-idft1p6d	436	21	.	.	.
cord-022053-idft1p6d	437	1	[	[	-LRB-
cord-022053-idft1p6d	437	2	133	133	CD
cord-022053-idft1p6d	437	3	]	]	-RRB-
cord-022053-idft1p6d	437	4	[	[	-LRB-
cord-022053-idft1p6d	437	5	134	134	CD
cord-022053-idft1p6d	437	6	]	]	-RRB-
cord-022053-idft1p6d	437	7	[	[	-LRB-
cord-022053-idft1p6d	437	8	135	135	CD
cord-022053-idft1p6d	437	9	]	]	-RRB-
cord-022053-idft1p6d	437	10	[	[	-LRB-
cord-022053-idft1p6d	437	11	136	136	CD
cord-022053-idft1p6d	437	12	]	]	-RRB-
cord-022053-idft1p6d	437	13	[	[	-LRB-
cord-022053-idft1p6d	437	14	137	137	CD
cord-022053-idft1p6d	437	15	]	]	-RRB-
cord-022053-idft1p6d	437	16	[	[	-LRB-
cord-022053-idft1p6d	437	17	138	138	CD
cord-022053-idft1p6d	437	18	]	]	-RRB-
cord-022053-idft1p6d	438	1	Fungal	fungal	JJ
cord-022053-idft1p6d	438	2	pathogens	pathogen	NNS
cord-022053-idft1p6d	438	3	are	be	VBP
cord-022053-idft1p6d	438	4	also	also	RB
cord-022053-idft1p6d	438	5	identified	identify	VBN
cord-022053-idft1p6d	438	6	using	use	VBG
cord-022053-idft1p6d	438	7	rRNA	rrna	JJ
cord-022053-idft1p6d	438	8	sequencing	sequencing	NN
cord-022053-idft1p6d	438	9	,	,	,
cord-022053-idft1p6d	438	10	although	although	IN
cord-022053-idft1p6d	438	11	it	-PRON-	PRP
cord-022053-idft1p6d	438	12	is	be	VBZ
cord-022053-idft1p6d	438	13	a	a	DT
cord-022053-idft1p6d	438	14	less	less	RBR
cord-022053-idft1p6d	438	15	established	established	JJ
cord-022053-idft1p6d	438	16	practice	practice	NN
cord-022053-idft1p6d	438	17	than	than	IN
cord-022053-idft1p6d	438	18	it	-PRON-	PRP
cord-022053-idft1p6d	438	19	is	be	VBZ
cord-022053-idft1p6d	438	20	for	for	IN
cord-022053-idft1p6d	438	21	bacterial	bacterial	JJ
cord-022053-idft1p6d	438	22	targets	target	NNS
cord-022053-idft1p6d	438	23	.	.	.
cord-022053-idft1p6d	439	1	The	the	DT
cord-022053-idft1p6d	439	2	fungal	fungal	NN
cord-022053-idft1p6d	439	3	rRNA	rRNA	NNP
cord-022053-idft1p6d	439	4	18S	18S	NNPS
cord-022053-idft1p6d	439	5	corresponds	correspond	VBZ
cord-022053-idft1p6d	439	6	to	to	IN
cord-022053-idft1p6d	439	7	bacterial	bacterial	JJ
cord-022053-idft1p6d	439	8	16S	16S	NNPS
cord-022053-idft1p6d	439	9	,	,	,
cord-022053-idft1p6d	439	10	although	although	IN
cord-022053-idft1p6d	439	11	it	-PRON-	PRP
cord-022053-idft1p6d	439	12	has	have	VBZ
cord-022053-idft1p6d	439	13	fewer	few	JJR
cord-022053-idft1p6d	439	14	hypervariable	hypervariable	JJ
cord-022053-idft1p6d	439	15	regions	region	NNS
cord-022053-idft1p6d	439	16	and	and	CC
cord-022053-idft1p6d	439	17	is	be	VBZ
cord-022053-idft1p6d	439	18	generally	generally	RB
cord-022053-idft1p6d	439	19	not	not	RB
cord-022053-idft1p6d	439	20	as	as	RB
cord-022053-idft1p6d	439	21	useful	useful	JJ
cord-022053-idft1p6d	439	22	for	for	IN
cord-022053-idft1p6d	439	23	isolate	isolate	NN
cord-022053-idft1p6d	439	24	discrimination	discrimination	NN
cord-022053-idft1p6d	439	25	.	.	.
cord-022053-idft1p6d	440	1	139	139	CD
cord-022053-idft1p6d	441	1	The	the	DT
cord-022053-idft1p6d	441	2	most	most	RBS
cord-022053-idft1p6d	441	3	common	common	JJ
cord-022053-idft1p6d	441	4	regions	region	NNS
cord-022053-idft1p6d	441	5	for	for	IN
cord-022053-idft1p6d	441	6	fungal	fungal	JJ
cord-022053-idft1p6d	441	7	identification	identification	NN
cord-022053-idft1p6d	441	8	are	be	VBP
cord-022053-idft1p6d	441	9	the	the	DT
cord-022053-idft1p6d	441	10	ITS	its	PRP$
cord-022053-idft1p6d	441	11	regions	region	NNS
cord-022053-idft1p6d	441	12	1	1	CD
cord-022053-idft1p6d	441	13	and	and	CC
cord-022053-idft1p6d	441	14	2	2	CD
cord-022053-idft1p6d	441	15	,	,	,
cord-022053-idft1p6d	441	16	as	as	RB
cord-022053-idft1p6d	441	17	well	well	RB
cord-022053-idft1p6d	441	18	as	as	IN
cord-022053-idft1p6d	441	19	the	the	DT
cord-022053-idft1p6d	441	20	D1	d1	NN
cord-022053-idft1p6d	441	21	and	and	CC
cord-022053-idft1p6d	441	22	D2	d2	NN
cord-022053-idft1p6d	441	23	hypervariable	hypervariable	JJ
cord-022053-idft1p6d	441	24	regions	region	NNS
cord-022053-idft1p6d	441	25	of	of	IN
cord-022053-idft1p6d	441	26	the	the	DT
cord-022053-idft1p6d	441	27	28S	28S	NNP
cord-022053-idft1p6d	441	28	rRNA	rRNA	NNP
cord-022053-idft1p6d	441	29	large	large	JJ
cord-022053-idft1p6d	441	30	subunit	subunit	NN
cord-022053-idft1p6d	441	31	component	component	NN
cord-022053-idft1p6d	441	32	(	(	-LRB-
cord-022053-idft1p6d	441	33	Fig	Fig	NNP
cord-022053-idft1p6d	441	34	.	.	.
cord-022053-idft1p6d	441	35	6.2	6.2	CD
cord-022053-idft1p6d	441	36	)	)	-RRB-
cord-022053-idft1p6d	441	37	.	.	.
cord-022053-idft1p6d	442	1	[	[	-LRB-
cord-022053-idft1p6d	442	2	139	139	CD
cord-022053-idft1p6d	442	3	]	]	-RRB-
cord-022053-idft1p6d	442	4	[	[	-LRB-
cord-022053-idft1p6d	442	5	140	140	CD
cord-022053-idft1p6d	442	6	]	]	-RRB-
cord-022053-idft1p6d	443	1	[	[	-LRB-
cord-022053-idft1p6d	443	2	141	141	CD
cord-022053-idft1p6d	443	3	]	]	-RRB-
cord-022053-idft1p6d	444	1	When	when	WRB
cord-022053-idft1p6d	444	2	using	use	VBG
cord-022053-idft1p6d	444	3	these	these	DT
cord-022053-idft1p6d	444	4	targets	target	NNS
cord-022053-idft1p6d	444	5	to	to	TO
cord-022053-idft1p6d	444	6	identify	identify	VB
cord-022053-idft1p6d	444	7	an	an	DT
cord-022053-idft1p6d	444	8	isolate	isolate	NN
cord-022053-idft1p6d	444	9	,	,	,
cord-022053-idft1p6d	444	10	criteria	criterion	NNS
cord-022053-idft1p6d	444	11	required	require	VBN
cord-022053-idft1p6d	444	12	for	for	IN
cord-022053-idft1p6d	444	13	percentage	percentage	NN
cord-022053-idft1p6d	444	14	identity	identity	NN
cord-022053-idft1p6d	444	15	and	and	CC
cord-022053-idft1p6d	444	16	percentage	percentage	NN
cord-022053-idft1p6d	444	17	difference	difference	NN
cord-022053-idft1p6d	444	18	between	between	IN
cord-022053-idft1p6d	444	19	competing	compete	VBG
cord-022053-idft1p6d	444	20	matches	match	NNS
cord-022053-idft1p6d	444	21	are	be	VBP
cord-022053-idft1p6d	444	22	not	not	RB
cord-022053-idft1p6d	444	23	as	as	RB
cord-022053-idft1p6d	444	24	clear	clear	JJ
cord-022053-idft1p6d	444	25	for	for	IN
cord-022053-idft1p6d	444	26	fungi	fungus	NNS
cord-022053-idft1p6d	444	27	as	as	IN
cord-022053-idft1p6d	444	28	they	-PRON-	PRP
cord-022053-idft1p6d	444	29	are	be	VBP
cord-022053-idft1p6d	444	30	for	for	IN
cord-022053-idft1p6d	444	31	bacteria	bacteria	NNS
cord-022053-idft1p6d	444	32	.	.	.
cord-022053-idft1p6d	445	1	126	126	CD
cord-022053-idft1p6d	446	1	The	the	DT
cord-022053-idft1p6d	446	2	lack	lack	NN
cord-022053-idft1p6d	446	3	of	of	IN
cord-022053-idft1p6d	446	4	high	high	JJ
cord-022053-idft1p6d	446	5	-	-	HYPH
cord-022053-idft1p6d	446	6	quality	quality	NN
cord-022053-idft1p6d	446	7	databases	database	NNS
cord-022053-idft1p6d	446	8	has	have	VBZ
cord-022053-idft1p6d	446	9	been	be	VBN
cord-022053-idft1p6d	446	10	a	a	DT
cord-022053-idft1p6d	446	11	major	major	JJ
cord-022053-idft1p6d	446	12	difficulty	difficulty	NN
cord-022053-idft1p6d	446	13	in	in	IN
cord-022053-idft1p6d	446	14	fungal	fungal	JJ
cord-022053-idft1p6d	446	15	sequencing	sequencing	NN
cord-022053-idft1p6d	446	16	,	,	,
cord-022053-idft1p6d	446	17	with	with	IN
cord-022053-idft1p6d	446	18	estimates	estimate	NNS
cord-022053-idft1p6d	446	19	of	of	IN
cord-022053-idft1p6d	446	20	up	up	IN
cord-022053-idft1p6d	446	21	to	to	TO
cord-022053-idft1p6d	446	22	20	20	CD
cord-022053-idft1p6d	446	23	%	%	NN
cord-022053-idft1p6d	446	24	of	of	IN
cord-022053-idft1p6d	446	25	the	the	DT
cord-022053-idft1p6d	446	26	entries	entry	NNS
cord-022053-idft1p6d	446	27	in	in	IN
cord-022053-idft1p6d	446	28	GenBank	GenBank	NNP
cord-022053-idft1p6d	446	29	being	be	VBG
cord-022053-idft1p6d	446	30	incorrectly	incorrectly	RB
cord-022053-idft1p6d	446	31	identified	identify	VBN
cord-022053-idft1p6d	446	32	down	down	RP
cord-022053-idft1p6d	446	33	to	to	IN
cord-022053-idft1p6d	446	34	species	species	NN
cord-022053-idft1p6d	446	35	level	level	NN
cord-022053-idft1p6d	446	36	.	.	.
cord-022053-idft1p6d	447	1	142	142	CD
cord-022053-idft1p6d	448	1	To	to	TO
cord-022053-idft1p6d	448	2	address	address	VB
cord-022053-idft1p6d	448	3	this	this	DT
cord-022053-idft1p6d	448	4	,	,	,
cord-022053-idft1p6d	448	5	several	several	JJ
cord-022053-idft1p6d	448	6	of	of	IN
cord-022053-idft1p6d	448	7	the	the	DT
cord-022053-idft1p6d	448	8	private	private	JJ
cord-022053-idft1p6d	448	9	databases	database	NNS
cord-022053-idft1p6d	448	10	that	that	WDT
cord-022053-idft1p6d	448	11	are	be	VBP
cord-022053-idft1p6d	448	12	available	available	JJ
cord-022053-idft1p6d	448	13	for	for	IN
cord-022053-idft1p6d	448	14	bacterial	bacterial	JJ
cord-022053-idft1p6d	448	15	sequencing	sequencing	NN
cord-022053-idft1p6d	448	16	also	also	RB
cord-022053-idft1p6d	448	17	include	include	VBP
cord-022053-idft1p6d	448	18	curated	curate	VBN
cord-022053-idft1p6d	448	19	or	or	CC
cord-022053-idft1p6d	448	20	partially	partially	RB
cord-022053-idft1p6d	448	21	curated	curate	VBN
cord-022053-idft1p6d	448	22	fungal	fungal	NN
cord-022053-idft1p6d	448	23	databases	database	NNS
cord-022053-idft1p6d	448	24	(	(	-LRB-
cord-022053-idft1p6d	448	25	IDNS	IDNS	NNP
cord-022053-idft1p6d	448	26	and	and	CC
cord-022053-idft1p6d	448	27	RipSeq	RipSeq	NNP
cord-022053-idft1p6d	448	28	)	)	-RRB-
cord-022053-idft1p6d	448	29	.	.	.
cord-022053-idft1p6d	449	1	143	143	CD
cord-022053-idft1p6d	450	1	The	the	DT
cord-022053-idft1p6d	450	2	MicroSEQ	microseq	NN
cord-022053-idft1p6d	450	3	system	system	NN
cord-022053-idft1p6d	450	4	also	also	RB
cord-022053-idft1p6d	450	5	includes	include	VBZ
cord-022053-idft1p6d	450	6	a	a	DT
cord-022053-idft1p6d	450	7	fungal	fungal	JJ
cord-022053-idft1p6d	450	8	component	component	NN
cord-022053-idft1p6d	450	9	,	,	,
cord-022053-idft1p6d	450	10	but	but	CC
cord-022053-idft1p6d	450	11	it	-PRON-	PRP
cord-022053-idft1p6d	450	12	is	be	VBZ
cord-022053-idft1p6d	450	13	limited	limit	VBN
cord-022053-idft1p6d	450	14	to	to	IN
cord-022053-idft1p6d	450	15	the	the	DT
cord-022053-idft1p6d	450	16	D2	d2	NN
cord-022053-idft1p6d	450	17	region	region	NN
cord-022053-idft1p6d	450	18	of	of	IN
cord-022053-idft1p6d	450	19	28S.	28s.	CD
cord-022053-idft1p6d	451	1	Recently	recently	RB
cord-022053-idft1p6d	451	2	,	,	,
cord-022053-idft1p6d	451	3	several	several	JJ
cord-022053-idft1p6d	451	4	public	public	JJ
cord-022053-idft1p6d	451	5	databases	database	NNS
cord-022053-idft1p6d	451	6	have	have	VBP
cord-022053-idft1p6d	451	7	become	become	VBN
cord-022053-idft1p6d	451	8	available	available	JJ
cord-022053-idft1p6d	451	9	with	with	IN
cord-022053-idft1p6d	451	10	high	high	JJ
cord-022053-idft1p6d	451	11	-	-	HYPH
cord-022053-idft1p6d	451	12	quality	quality	NN
cord-022053-idft1p6d	451	13	,	,	,
cord-022053-idft1p6d	451	14	curated	curate	VBN
cord-022053-idft1p6d	451	15	content	content	NN
cord-022053-idft1p6d	451	16	.	.	.
cord-022053-idft1p6d	452	1	Databases	database	NNS
cord-022053-idft1p6d	452	2	that	that	WDT
cord-022053-idft1p6d	452	3	are	be	VBP
cord-022053-idft1p6d	452	4	most	most	RBS
cord-022053-idft1p6d	452	5	focused	focus	VBN
cord-022053-idft1p6d	452	6	on	on	IN
cord-022053-idft1p6d	452	7	species	specie	NNS
cord-022053-idft1p6d	452	8	of	of	IN
cord-022053-idft1p6d	452	9	medical	medical	JJ
cord-022053-idft1p6d	452	10	importance	importance	NN
cord-022053-idft1p6d	452	11	include	include	VBP
cord-022053-idft1p6d	452	12	the	the	DT
cord-022053-idft1p6d	452	13	International	International	NNP
cord-022053-idft1p6d	452	14	Society	Society	NNP
cord-022053-idft1p6d	452	15	for	for	IN
cord-022053-idft1p6d	452	16	Human	Human	NNP
cord-022053-idft1p6d	452	17	and	and	CC
cord-022053-idft1p6d	452	18	Animal	Animal	NNP
cord-022053-idft1p6d	452	19	Mycology	Mycology	NNP
cord-022053-idft1p6d	452	20	(	(	-LRB-
cord-022053-idft1p6d	452	21	ISHAM	ISHAM	NNP
cord-022053-idft1p6d	452	22	)	)	-RRB-
cord-022053-idft1p6d	453	1	ITS	its	PRP$
cord-022053-idft1p6d	453	2	database	database	NN
cord-022053-idft1p6d	453	3	contains	contain	VBZ
cord-022053-idft1p6d	453	4	3200	3200	CD
cord-022053-idft1p6d	453	5	sequences	sequence	NNS
cord-022053-idft1p6d	453	6	representing	represent	VBG
cord-022053-idft1p6d	453	7	524	524	CD
cord-022053-idft1p6d	453	8	human/	human/	CD
cord-022053-idft1p6d	453	9	animal	animal	NN
cord-022053-idft1p6d	453	10	pathogenic	pathogenic	JJ
cord-022053-idft1p6d	453	11	fungal	fungal	JJ
cord-022053-idft1p6d	453	12	species	specie	NNS
cord-022053-idft1p6d	453	13	and	and	CC
cord-022053-idft1p6d	453	14	is	be	VBZ
cord-022053-idft1p6d	453	15	a	a	DT
cord-022053-idft1p6d	453	16	major	major	JJ
cord-022053-idft1p6d	453	17	resource	resource	NN
cord-022053-idft1p6d	453	18	for	for	IN
cord-022053-idft1p6d	453	19	clinical	clinical	JJ
cord-022053-idft1p6d	453	20	laboratories	laboratory	NNS
cord-022053-idft1p6d	453	21	.	.	.
cord-022053-idft1p6d	454	1	144	144	CD
cord-022053-idft1p6d	455	1	It	-PRON-	PRP
cord-022053-idft1p6d	455	2	can	can	MD
cord-022053-idft1p6d	455	3	be	be	VB
cord-022053-idft1p6d	455	4	searched	search	VBN
cord-022053-idft1p6d	455	5	via	via	IN
cord-022053-idft1p6d	455	6	a	a	DT
cord-022053-idft1p6d	455	7	web	web	NN
cord-022053-idft1p6d	455	8	-	-	HYPH
cord-022053-idft1p6d	455	9	based	base	VBN
cord-022053-idft1p6d	455	10	platform	platform	NN
cord-022053-idft1p6d	455	11	(	(	-LRB-
cord-022053-idft1p6d	455	12	its.mycologylab.org	its.mycologylab.org	NN
cord-022053-idft1p6d	455	13	)	)	-RRB-
cord-022053-idft1p6d	455	14	.	.	.
cord-022053-idft1p6d	456	1	The	the	DT
cord-022053-idft1p6d	456	2	National	National	NNP
cord-022053-idft1p6d	456	3	Center	Center	NNP
cord-022053-idft1p6d	456	4	for	for	IN
cord-022053-idft1p6d	456	5	Biotechnology	Biotechnology	NNP
cord-022053-idft1p6d	456	6	Information	Information	NNP
cord-022053-idft1p6d	456	7	RefSeq	RefSeq	NNP
cord-022053-idft1p6d	457	1	ITS	its	PRP$
cord-022053-idft1p6d	457	2	database	database	NN
cord-022053-idft1p6d	457	3	contains	contain	VBZ
cord-022053-idft1p6d	457	4	3060	3060	CD
cord-022053-idft1p6d	457	5	sequences	sequence	NNS
cord-022053-idft1p6d	457	6	representing	represent	VBG
cord-022053-idft1p6d	457	7	270	270	CD
cord-022053-idft1p6d	457	8	families	family	NNS
cord-022053-idft1p6d	457	9	from	from	IN
cord-022053-idft1p6d	457	10	39	39	CD
cord-022053-idft1p6d	457	11	classes	class	NNS
cord-022053-idft1p6d	457	12	.	.	.
cord-022053-idft1p6d	458	1	The	the	DT
cord-022053-idft1p6d	458	2	smaller	small	JJR
cord-022053-idft1p6d	458	3	28S	28S	NNP
cord-022053-idft1p6d	458	4	RefSeq	RefSeq	NNP
cord-022053-idft1p6d	458	5	database	database	NN
cord-022053-idft1p6d	458	6	contains	contain	VBZ
cord-022053-idft1p6d	458	7	approximately	approximately	RB
cord-022053-idft1p6d	458	8	500	500	CD
cord-022053-idft1p6d	458	9	,	,	,
cord-022053-idft1p6d	458	10	representing	represent	VBG
cord-022053-idft1p6d	458	11	greater	great	JJR
cord-022053-idft1p6d	458	12	than	than	IN
cord-022053-idft1p6d	458	13	100	100	CD
cord-022053-idft1p6d	458	14	families	family	NNS
cord-022053-idft1p6d	458	15	from	from	IN
cord-022053-idft1p6d	458	16	21	21	CD
cord-022053-idft1p6d	458	17	classes	class	NNS
cord-022053-idft1p6d	458	18	.	.	.
cord-022053-idft1p6d	459	1	145	145	CD
cord-022053-idft1p6d	460	1	This	this	DT
cord-022053-idft1p6d	460	2	technique	technique	NN
cord-022053-idft1p6d	460	3	is	be	VBZ
cord-022053-idft1p6d	460	4	particularly	particularly	RB
cord-022053-idft1p6d	460	5	promising	promising	JJ
cord-022053-idft1p6d	460	6	for	for	IN
cord-022053-idft1p6d	460	7	identifying	identify	VBG
cord-022053-idft1p6d	460	8	fungi	fungus	NNS
cord-022053-idft1p6d	460	9	from	from	IN
cord-022053-idft1p6d	460	10	fixed	fix	VBN
cord-022053-idft1p6d	460	11	tissue	tissue	NN
cord-022053-idft1p6d	460	12	.	.	.
cord-022053-idft1p6d	461	1	55	55	CD
cord-022053-idft1p6d	461	2	,	,	,
cord-022053-idft1p6d	461	3	146	146	CD
cord-022053-idft1p6d	461	4	,	,	,
cord-022053-idft1p6d	461	5	147	147	CD
cord-022053-idft1p6d	461	6	Important	important	JJ
cord-022053-idft1p6d	461	7	caveats	caveat	NNS
cord-022053-idft1p6d	461	8	of	of	IN
cord-022053-idft1p6d	461	9	rRNA	rrna	JJ
cord-022053-idft1p6d	461	10	sequencing	sequencing	NN
cord-022053-idft1p6d	461	11	include	include	VBP
cord-022053-idft1p6d	461	12	high	high	JJ
cord-022053-idft1p6d	461	13	cost	cost	NN
cord-022053-idft1p6d	461	14	and	and	CC
cord-022053-idft1p6d	461	15	complexity	complexity	NN
cord-022053-idft1p6d	461	16	,	,	,
cord-022053-idft1p6d	461	17	issues	issue	NNS
cord-022053-idft1p6d	461	18	with	with	IN
cord-022053-idft1p6d	461	19	uncurated	uncurated	JJ
cord-022053-idft1p6d	461	20	databases	database	NNS
cord-022053-idft1p6d	461	21	(	(	-LRB-
cord-022053-idft1p6d	461	22	described	describe	VBN
cord-022053-idft1p6d	461	23	above	above	IN
cord-022053-idft1p6d	461	24	)	)	-RRB-
cord-022053-idft1p6d	461	25	,	,	,
cord-022053-idft1p6d	461	26	and	and	CC
cord-022053-idft1p6d	461	27	the	the	DT
cord-022053-idft1p6d	461	28	potential	potential	NN
cord-022053-idft1p6d	461	29	for	for	IN
cord-022053-idft1p6d	461	30	false	false	JJ
cord-022053-idft1p6d	461	31	positives	positive	NNS
cord-022053-idft1p6d	461	32	.	.	.
cord-022053-idft1p6d	462	1	This	this	DT
cord-022053-idft1p6d	462	2	is	be	VBZ
cord-022053-idft1p6d	462	3	particularly	particularly	RB
cord-022053-idft1p6d	462	4	the	the	DT
cord-022053-idft1p6d	462	5	case	case	NN
cord-022053-idft1p6d	462	6	when	when	WRB
cord-022053-idft1p6d	462	7	broad	broad	JJ
cord-022053-idft1p6d	462	8	-	-	HYPH
cord-022053-idft1p6d	462	9	range	range	NN
cord-022053-idft1p6d	462	10	sequencing	sequencing	NN
cord-022053-idft1p6d	462	11	is	be	VBZ
cord-022053-idft1p6d	462	12	applied	apply	VBN
cord-022053-idft1p6d	462	13	to	to	IN
cord-022053-idft1p6d	462	14	primary	primary	JJ
cord-022053-idft1p6d	462	15	specimens	specimen	NNS
cord-022053-idft1p6d	462	16	to	to	TO
cord-022053-idft1p6d	462	17	"	"	``
cord-022053-idft1p6d	462	18	fish	fish	NN
cord-022053-idft1p6d	462	19	"	"	''
cord-022053-idft1p6d	462	20	for	for	IN
cord-022053-idft1p6d	462	21	an	an	DT
cord-022053-idft1p6d	462	22	infectious	infectious	JJ
cord-022053-idft1p6d	462	23	agent	agent	NN
cord-022053-idft1p6d	462	24	in	in	IN
cord-022053-idft1p6d	462	25	the	the	DT
cord-022053-idft1p6d	462	26	absence	absence	NN
cord-022053-idft1p6d	462	27	of	of	IN
cord-022053-idft1p6d	462	28	any	any	DT
cord-022053-idft1p6d	462	29	corroborating	corroborate	VBG
cord-022053-idft1p6d	462	30	culture	culture	NN
cord-022053-idft1p6d	462	31	or	or	CC
cord-022053-idft1p6d	462	32	gram	gram	NN
cord-022053-idft1p6d	462	33	stain	stain	NN
cord-022053-idft1p6d	462	34	.	.	.
cord-022053-idft1p6d	463	1	Furthermore	furthermore	RB
cord-022053-idft1p6d	463	2	,	,	,
cord-022053-idft1p6d	463	3	rRNA	rrna	NN
cord-022053-idft1p6d	463	4	should	should	MD
cord-022053-idft1p6d	463	5	not	not	RB
cord-022053-idft1p6d	463	6	be	be	VB
cord-022053-idft1p6d	463	7	used	use	VBN
cord-022053-idft1p6d	463	8	to	to	TO
cord-022053-idft1p6d	463	9	determine	determine	VB
cord-022053-idft1p6d	463	10	whether	whether	IN
cord-022053-idft1p6d	463	11	an	an	DT
cord-022053-idft1p6d	463	12	infection	infection	NN
cord-022053-idft1p6d	463	13	has	have	VBZ
cord-022053-idft1p6d	463	14	"	"	``
cord-022053-idft1p6d	463	15	cleared	clear	VBN
cord-022053-idft1p6d	463	16	,	,	,
cord-022053-idft1p6d	463	17	"	"	''
cord-022053-idft1p6d	463	18	due	due	IN
cord-022053-idft1p6d	463	19	to	to	IN
cord-022053-idft1p6d	463	20	the	the	DT
cord-022053-idft1p6d	463	21	potential	potential	NN
cord-022053-idft1p6d	463	22	for	for	IN
cord-022053-idft1p6d	463	23	lingering	linger	VBG
cord-022053-idft1p6d	463	24	nucleic	nucleic	JJ
cord-022053-idft1p6d	463	25	acid	acid	NN
cord-022053-idft1p6d	463	26	even	even	RB
cord-022053-idft1p6d	463	27	in	in	IN
cord-022053-idft1p6d	463	28	a	a	DT
cord-022053-idft1p6d	463	29	successfully	successfully	RB
cord-022053-idft1p6d	463	30	treated	treat	VBN
cord-022053-idft1p6d	463	31	infection	infection	NN
cord-022053-idft1p6d	463	32	.	.	.
cord-022053-idft1p6d	464	1	Analysis	analysis	NN
cord-022053-idft1p6d	464	2	should	should	MD
cord-022053-idft1p6d	464	3	be	be	VB
cord-022053-idft1p6d	464	4	restricted	restrict	VBN
cord-022053-idft1p6d	464	5	to	to	IN
cord-022053-idft1p6d	464	6	normally	normally	RB
cord-022053-idft1p6d	464	7	sterile	sterile	JJ
cord-022053-idft1p6d	464	8	sites	site	NNS
cord-022053-idft1p6d	464	9	for	for	IN
cord-022053-idft1p6d	464	10	tests	test	NNS
cord-022053-idft1p6d	464	11	using	use	VBG
cord-022053-idft1p6d	464	12	In	in	IN
cord-022053-idft1p6d	464	13	FFPE	FFPE	NNP
cord-022053-idft1p6d	464	14	in	in	IN
cord-022053-idft1p6d	464	15	which	which	WDT
cord-022053-idft1p6d	464	16	an	an	DT
cord-022053-idft1p6d	464	17	organism	organism	NN
cord-022053-idft1p6d	464	18	has	have	VBZ
cord-022053-idft1p6d	464	19	been	be	VBN
cord-022053-idft1p6d	464	20	seen	see	VBN
cord-022053-idft1p6d	464	21	but	but	CC
cord-022053-idft1p6d	464	22	not	not	RB
cord-022053-idft1p6d	464	23	identified	identify	VBN
cord-022053-idft1p6d	464	24	(	(	-LRB-
cord-022053-idft1p6d	464	25	such	such	JJ
cord-022053-idft1p6d	464	26	as	as	IN
cord-022053-idft1p6d	464	27	bacteria	bacteria	NNS
cord-022053-idft1p6d	464	28	,	,	,
cord-022053-idft1p6d	464	29	fungal	fungal	JJ
cord-022053-idft1p6d	464	30	elements	element	NNS
cord-022053-idft1p6d	464	31	,	,	,
cord-022053-idft1p6d	464	32	viral	viral	JJ
cord-022053-idft1p6d	464	33	cytopathic	cytopathic	JJ
cord-022053-idft1p6d	464	34	or	or	CC
cord-022053-idft1p6d	464	35	necrotic	necrotic	JJ
cord-022053-idft1p6d	464	36	effect	effect	NN
cord-022053-idft1p6d	464	37	,	,	,
cord-022053-idft1p6d	464	38	or	or	CC
cord-022053-idft1p6d	464	39	unidentified	unidentified	JJ
cord-022053-idft1p6d	464	40	parasitic	parasitic	JJ
cord-022053-idft1p6d	464	41	elements	element	NNS
cord-022053-idft1p6d	464	42	)	)	-RRB-
cord-022053-idft1p6d	464	43	,	,	,
cord-022053-idft1p6d	464	44	NGS	NGS	NNP
cord-022053-idft1p6d	464	45	has	have	VBZ
cord-022053-idft1p6d	464	46	enormous	enormous	JJ
cord-022053-idft1p6d	464	47	potential	potential	NN
cord-022053-idft1p6d	464	48	to	to	TO
cord-022053-idft1p6d	464	49	rectify	rectify	VB
cord-022053-idft1p6d	464	50	these	these	DT
cord-022053-idft1p6d	464	51	s	s	NNS
cord-022053-idft1p6d	464	52	diagnoses	diagnosis	NNS
cord-022053-idft1p6d	464	53	but	but	CC
cord-022053-idft1p6d	464	54	is	be	VBZ
cord-022053-idft1p6d	464	55	currently	currently	RB
cord-022053-idft1p6d	464	56	limited	limit	VBN
cord-022053-idft1p6d	464	57	by	by	IN
cord-022053-idft1p6d	464	58	cost	cost	NN
cord-022053-idft1p6d	464	59	per	per	IN
cord-022053-idft1p6d	464	60	sample	sample	NN
cord-022053-idft1p6d	464	61	and	and	CC
cord-022053-idft1p6d	464	62	the	the	DT
cord-022053-idft1p6d	464	63	enormous	enormous	JJ
cord-022053-idft1p6d	464	64	amounts	amount	NNS
cord-022053-idft1p6d	464	65	of	of	IN
cord-022053-idft1p6d	464	66	raw	raw	JJ
cord-022053-idft1p6d	464	67	human	human	JJ
cord-022053-idft1p6d	464	68	data	datum	NNS
cord-022053-idft1p6d	464	69	in	in	IN
cord-022053-idft1p6d	464	70	comparison	comparison	NN
cord-022053-idft1p6d	464	71	with	with	IN
cord-022053-idft1p6d	464	72	the	the	DT
cord-022053-idft1p6d	464	73	relatively	relatively	RB
cord-022053-idft1p6d	464	74	small	small	JJ
cord-022053-idft1p6d	464	75	amount	amount	NN
cord-022053-idft1p6d	464	76	of	of	IN
cord-022053-idft1p6d	464	77	the	the	DT
cord-022053-idft1p6d	464	78	organism	organism	NN
cord-022053-idft1p6d	464	79	's	's	POS
cord-022053-idft1p6d	464	80	sequence	sequence	NN
cord-022053-idft1p6d	464	81	.	.	.
cord-022053-idft1p6d	465	1	As	as	IN
cord-022053-idft1p6d	465	2	costs	cost	NNS
cord-022053-idft1p6d	465	3	fall	fall	VBP
cord-022053-idft1p6d	465	4	for	for	IN
cord-022053-idft1p6d	465	5	sequencing	sequence	VBG
cord-022053-idft1p6d	465	6	and	and	CC
cord-022053-idft1p6d	465	7	rapid	rapid	JJ
cord-022053-idft1p6d	465	8	bioinformatic	bioinformatic	JJ
cord-022053-idft1p6d	465	9	methods	method	NNS
cord-022053-idft1p6d	465	10	for	for	IN
cord-022053-idft1p6d	465	11	elucidating	elucidate	VBG
cord-022053-idft1p6d	465	12	causative	causative	JJ
cord-022053-idft1p6d	465	13	sequence	sequence	NN
cord-022053-idft1p6d	465	14	emerge	emerge	VB
cord-022053-idft1p6d	465	15	,	,	,
cord-022053-idft1p6d	465	16	NGS	NGS	NNP
cord-022053-idft1p6d	465	17	will	will	MD
cord-022053-idft1p6d	465	18	become	become	VB
cord-022053-idft1p6d	465	19	a	a	DT
cord-022053-idft1p6d	465	20	primary	primary	JJ
cord-022053-idft1p6d	465	21	tool	tool	NN
cord-022053-idft1p6d	465	22	for	for	IN
cord-022053-idft1p6d	465	23	confirmation	confirmation	NN
cord-022053-idft1p6d	465	24	of	of	IN
cord-022053-idft1p6d	465	25	microbial	microbial	JJ
cord-022053-idft1p6d	465	26	infections	infection	NNS
cord-022053-idft1p6d	465	27	.	.	.
cord-022053-idft1p6d	466	1	One	one	CD
cord-022053-idft1p6d	466	2	last	last	JJ
cord-022053-idft1p6d	466	3	technology	technology	NN
cord-022053-idft1p6d	466	4	to	to	TO
cord-022053-idft1p6d	466	5	consider	consider	VB
cord-022053-idft1p6d	466	6	is	be	VBZ
cord-022053-idft1p6d	466	7	the	the	DT
cord-022053-idft1p6d	466	8	hybrid	hybrid	JJ
cord-022053-idft1p6d	466	9	system	system	NN
cord-022053-idft1p6d	466	10	,	,	,
cord-022053-idft1p6d	466	11	PLEX	PLEX	NNP
cord-022053-idft1p6d	466	12	-	-	HYPH
cord-022053-idft1p6d	466	13	ID	ID	NNP
cord-022053-idft1p6d	466	14	by	by	IN
cord-022053-idft1p6d	466	15	Abbott	Abbott	NNP
cord-022053-idft1p6d	466	16	,	,	,
cord-022053-idft1p6d	466	17	which	which	WDT
cord-022053-idft1p6d	466	18	combines	combine	VBZ
cord-022053-idft1p6d	466	19	a	a	DT
cord-022053-idft1p6d	466	20	PCR	PCR	NNP
cord-022053-idft1p6d	466	21	step	step	NN
cord-022053-idft1p6d	466	22	to	to	TO
cord-022053-idft1p6d	466	23	amplify	amplify	VB
cord-022053-idft1p6d	466	24	through	through	IN
cord-022053-idft1p6d	466	25	a	a	DT
cord-022053-idft1p6d	466	26	set	set	NN
cord-022053-idft1p6d	466	27	of	of	IN
cord-022053-idft1p6d	466	28	primers	primer	NNS
cord-022053-idft1p6d	466	29	(	(	-LRB-
cord-022053-idft1p6d	466	30	PLEX	PLEX	NNP
cord-022053-idft1p6d	466	31	-	-	HYPH
cord-022053-idft1p6d	466	32	ID	ID	NNP
cord-022053-idft1p6d	466	33	Viral	Viral	NNP
cord-022053-idft1p6d	466	34	IC	IC	NNP
cord-022053-idft1p6d	466	35	,	,	,
cord-022053-idft1p6d	466	36	PLEX	PLEX	NNP
cord-022053-idft1p6d	466	37	-	-	HYPH
cord-022053-idft1p6d	466	38	ID	ID	NNP
cord-022053-idft1p6d	466	39	BAC	BAC	NNP
cord-022053-idft1p6d	466	40	Spectrum	Spectrum	NNP
cord-022053-idft1p6d	466	41	BC	BC	NNP
cord-022053-idft1p6d	466	42	,	,	,
cord-022053-idft1p6d	466	43	or	or	CC
cord-022053-idft1p6d	466	44	PLEX	PLEX	NNP
cord-022053-idft1p6d	466	45	-	-	HYPH
cord-022053-idft1p6d	466	46	ID	ID	NNP
cord-022053-idft1p6d	466	47	Flu	Flu	NNP
cord-022053-idft1p6d	466	48	)	)	-RRB-
cord-022053-idft1p6d	466	49	a	a	DT
cord-022053-idft1p6d	466	50	broad	broad	JJ
cord-022053-idft1p6d	466	51	range	range	NN
cord-022053-idft1p6d	466	52	of	of	IN
cord-022053-idft1p6d	466	53	organisms	organism	NNS
cord-022053-idft1p6d	466	54	and	and	CC
cord-022053-idft1p6d	466	55	then	then	RB
cord-022053-idft1p6d	466	56	detects	detect	VBZ
cord-022053-idft1p6d	466	57	the	the	DT
cord-022053-idft1p6d	466	58	PCR	PCR	NNP
cord-022053-idft1p6d	466	59	products	product	NNS
cord-022053-idft1p6d	466	60	through	through	IN
cord-022053-idft1p6d	466	61	mass	mass	NN
cord-022053-idft1p6d	466	62	spectroscopy	spectroscopy	NN
cord-022053-idft1p6d	466	63	.	.	.
cord-022053-idft1p6d	467	1	This	this	DT
cord-022053-idft1p6d	467	2	approach	approach	NN
cord-022053-idft1p6d	467	3	combines	combine	VBZ
cord-022053-idft1p6d	467	4	amplification	amplification	NN
cord-022053-idft1p6d	467	5	of	of	IN
cord-022053-idft1p6d	467	6	many	many	JJ
cord-022053-idft1p6d	467	7	sample	sample	NN
cord-022053-idft1p6d	467	8	types	type	NNS
cord-022053-idft1p6d	467	9	,	,	,
cord-022053-idft1p6d	467	10	including	include	VBG
cord-022053-idft1p6d	467	11	body	body	NN
cord-022053-idft1p6d	467	12	fluids	fluid	NNS
cord-022053-idft1p6d	467	13	,	,	,
cord-022053-idft1p6d	467	14	tissue	tissue	NN
cord-022053-idft1p6d	467	15	,	,	,
cord-022053-idft1p6d	467	16	FFPE	ffpe	NN
cord-022053-idft1p6d	467	17	,	,	,
cord-022053-idft1p6d	467	18	culture	culture	NN
cord-022053-idft1p6d	467	19	isolates	isolate	NNS
cord-022053-idft1p6d	467	20	,	,	,
cord-022053-idft1p6d	467	21	and	and	CC
cord-022053-idft1p6d	467	22	blood	blood	NN
cord-022053-idft1p6d	467	23	,	,	,
cord-022053-idft1p6d	467	24	with	with	IN
cord-022053-idft1p6d	467	25	a	a	DT
cord-022053-idft1p6d	467	26	highly	highly	RB
cord-022053-idft1p6d	467	27	sensitive	sensitive	JJ
cord-022053-idft1p6d	467	28	detection	detection	NN
cord-022053-idft1p6d	467	29	system	system	NN
cord-022053-idft1p6d	467	30	to	to	TO
cord-022053-idft1p6d	467	31	make	make	VB
cord-022053-idft1p6d	467	32	subtle	subtle	JJ
cord-022053-idft1p6d	467	33	species	species	NN
cord-022053-idft1p6d	467	34	determinations	determination	NNS
cord-022053-idft1p6d	467	35	across	across	IN
cord-022053-idft1p6d	467	36	organism	organism	NN
cord-022053-idft1p6d	467	37	types	type	NNS
cord-022053-idft1p6d	467	38	,	,	,
cord-022053-idft1p6d	467	39	including	include	VBG
cord-022053-idft1p6d	467	40	bacterial	bacterial	JJ
cord-022053-idft1p6d	467	41	,	,	,
cord-022053-idft1p6d	467	42	fungal	fungal	JJ
cord-022053-idft1p6d	467	43	,	,	,
cord-022053-idft1p6d	467	44	viral	viral	JJ
cord-022053-idft1p6d	467	45	,	,	,
cord-022053-idft1p6d	467	46	and	and	CC
cord-022053-idft1p6d	467	47	some	some	DT
cord-022053-idft1p6d	467	48	parasitic	parasitic	JJ
cord-022053-idft1p6d	467	49	.	.	.
cord-022053-idft1p6d	468	1	[	[	-LRB-
cord-022053-idft1p6d	468	2	167	167	CD
cord-022053-idft1p6d	468	3	]	]	-RRB-
cord-022053-idft1p6d	468	4	[	[	-LRB-
cord-022053-idft1p6d	468	5	168	168	CD
cord-022053-idft1p6d	468	6	]	]	-RRB-
cord-022053-idft1p6d	468	7	[	[	-LRB-
cord-022053-idft1p6d	468	8	169	169	CD
cord-022053-idft1p6d	468	9	]	]	-RRB-
cord-022053-idft1p6d	469	1	[	[	-LRB-
cord-022053-idft1p6d	469	2	170	170	CD
cord-022053-idft1p6d	469	3	]	]	-RRB-
cord-022053-idft1p6d	470	1	As	as	IN
cord-022053-idft1p6d	470	2	the	the	DT
cord-022053-idft1p6d	470	3	database	database	NN
cord-022053-idft1p6d	470	4	of	of	IN
cord-022053-idft1p6d	470	5	spectra	spectra	NNP
cord-022053-idft1p6d	470	6	improves	improve	VBZ
cord-022053-idft1p6d	470	7	and	and	CC
cord-022053-idft1p6d	470	8	the	the	DT
cord-022053-idft1p6d	470	9	multiplex	multiplex	NN
cord-022053-idft1p6d	470	10	primers	primer	NNS
cord-022053-idft1p6d	470	11	improve	improve	VBP
cord-022053-idft1p6d	470	12	,	,	,
cord-022053-idft1p6d	470	13	this	this	DT
cord-022053-idft1p6d	470	14	system	system	NN
cord-022053-idft1p6d	470	15	will	will	MD
cord-022053-idft1p6d	470	16	gain	gain	VB
cord-022053-idft1p6d	470	17	popularity	popularity	NN
cord-022053-idft1p6d	470	18	,	,	,
cord-022053-idft1p6d	470	19	although	although	IN
cord-022053-idft1p6d	470	20	it	-PRON-	PRP
cord-022053-idft1p6d	470	21	is	be	VBZ
cord-022053-idft1p6d	470	22	still	still	RB
cord-022053-idft1p6d	470	23	limited	limit	VBN
cord-022053-idft1p6d	470	24	by	by	IN
cord-022053-idft1p6d	470	25	initial	initial	JJ
cord-022053-idft1p6d	470	26	organism	organism	NN
cord-022053-idft1p6d	470	27	burden	burden	NN
cord-022053-idft1p6d	470	28	and	and	CC
cord-022053-idft1p6d	470	29	procedure	procedure	NN
cord-022053-idft1p6d	470	30	time	time	NN
cord-022053-idft1p6d	470	31	(	(	-LRB-
cord-022053-idft1p6d	470	32	up	up	IN
cord-022053-idft1p6d	470	33	to	to	TO
cord-022053-idft1p6d	470	34	8	8	CD
cord-022053-idft1p6d	470	35	hours	hour	NNS
cord-022053-idft1p6d	470	36	)	)	-RRB-
cord-022053-idft1p6d	470	37	.	.	.
cord-022053-idft1p6d	471	1	The	the	DT
cord-022053-idft1p6d	471	2	microbiology	microbiology	NN
cord-022053-idft1p6d	471	3	laboratory	laboratory	NN
cord-022053-idft1p6d	471	4	remains	remain	VBZ
cord-022053-idft1p6d	471	5	the	the	DT
cord-022053-idft1p6d	471	6	most	most	RBS
cord-022053-idft1p6d	471	7	important	important	JJ
cord-022053-idft1p6d	471	8	companion	companion	NN
cord-022053-idft1p6d	471	9	for	for	IN
cord-022053-idft1p6d	471	10	anatomic	anatomic	JJ
cord-022053-idft1p6d	471	11	pathologists	pathologist	NNS
cord-022053-idft1p6d	471	12	who	who	WP
cord-022053-idft1p6d	471	13	have	have	VBP
cord-022053-idft1p6d	471	14	a	a	DT
cord-022053-idft1p6d	471	15	potentially	potentially	RB
cord-022053-idft1p6d	471	16	infectious	infectious	JJ
cord-022053-idft1p6d	471	17	diagnosis	diagnosis	NN
cord-022053-idft1p6d	471	18	under	under	IN
cord-022053-idft1p6d	471	19	the	the	DT
cord-022053-idft1p6d	471	20	microscope	microscope	NN
cord-022053-idft1p6d	471	21	.	.	.
cord-022053-idft1p6d	472	1	Anecdotal	anecdotal	JJ
cord-022053-idft1p6d	472	2	and	and	CC
cord-022053-idft1p6d	472	3	small	small	JJ
cord-022053-idft1p6d	472	4	studies	study	NNS
cord-022053-idft1p6d	472	5	have	have	VBP
cord-022053-idft1p6d	472	6	demonstrated	demonstrate	VBN
cord-022053-idft1p6d	472	7	that	that	IN
cord-022053-idft1p6d	472	8	the	the	DT
cord-022053-idft1p6d	472	9	yield	yield	NN
cord-022053-idft1p6d	472	10	from	from	IN
cord-022053-idft1p6d	472	11	molecular	molecular	JJ
cord-022053-idft1p6d	472	12	tests	test	NNS
cord-022053-idft1p6d	472	13	that	that	WDT
cord-022053-idft1p6d	472	14	are	be	VBP
cord-022053-idft1p6d	472	15	performed	perform	VBN
cord-022053-idft1p6d	472	16	blindly	blindly	RB
cord-022053-idft1p6d	472	17	(	(	-LRB-
cord-022053-idft1p6d	472	18	without	without	IN
cord-022053-idft1p6d	472	19	visualization	visualization	NN
cord-022053-idft1p6d	472	20	)	)	-RRB-
cord-022053-idft1p6d	472	21	versus	versus	IN
cord-022053-idft1p6d	472	22	with	with	IN
cord-022053-idft1p6d	472	23	pathologist	pathologist	NN
cord-022053-idft1p6d	472	24	's	's	POS
cord-022053-idft1p6d	472	25	review	review	NN
cord-022053-idft1p6d	472	26	is	be	VBZ
cord-022053-idft1p6d	472	27	miniscule	miniscule	JJ
cord-022053-idft1p6d	472	28	and	and	CC
cord-022053-idft1p6d	472	29	extremely	extremely	RB
cord-022053-idft1p6d	472	30	expensive	expensive	JJ
cord-022053-idft1p6d	472	31	.	.	.
cord-022053-idft1p6d	473	1	Therefore	therefore	RB
cord-022053-idft1p6d	473	2	anatomic	anatomic	JJ
cord-022053-idft1p6d	473	3	pathologists	pathologist	NNS
cord-022053-idft1p6d	473	4	and	and	CC
cord-022053-idft1p6d	473	5	their	-PRON-	PRP$
cord-022053-idft1p6d	473	6	microbiologic	microbiologic	JJ
cord-022053-idft1p6d	473	7	colleagues	colleague	NNS
cord-022053-idft1p6d	473	8	must	must	MD
cord-022053-idft1p6d	473	9	have	have	VB
cord-022053-idft1p6d	473	10	a	a	DT
cord-022053-idft1p6d	473	11	constant	constant	JJ
cord-022053-idft1p6d	473	12	line	line	NN
cord-022053-idft1p6d	473	13	of	of	IN
cord-022053-idft1p6d	473	14	communication	communication	NN
cord-022053-idft1p6d	473	15	from	from	IN
cord-022053-idft1p6d	473	16	the	the	DT
cord-022053-idft1p6d	473	17	moment	moment	NN
cord-022053-idft1p6d	473	18	the	the	DT
cord-022053-idft1p6d	473	19	specimen	specimen	NN
cord-022053-idft1p6d	473	20	is	be	VBZ
cord-022053-idft1p6d	473	21	collected	collect	VBN
cord-022053-idft1p6d	473	22	until	until	IN
cord-022053-idft1p6d	473	23	final	final	JJ
cord-022053-idft1p6d	473	24	reporting	reporting	NN
cord-022053-idft1p6d	473	25	to	to	TO
cord-022053-idft1p6d	473	26	ensure	ensure	VB
cord-022053-idft1p6d	473	27	interpretation	interpretation	NN
cord-022053-idft1p6d	473	28	of	of	IN
cord-022053-idft1p6d	473	29	all	all	DT
cord-022053-idft1p6d	473	30	modalities	modality	NNS
cord-022053-idft1p6d	473	31	is	be	VBZ
cord-022053-idft1p6d	473	32	maximally	maximally	RB
cord-022053-idft1p6d	473	33	beneficial	beneficial	JJ
cord-022053-idft1p6d	473	34	to	to	IN
cord-022053-idft1p6d	473	35	patient	patient	JJ
cord-022053-idft1p6d	473	36	care	care	NN
cord-022053-idft1p6d	473	37	.	.	.
cord-022053-idft1p6d	474	1	This	this	DT
cord-022053-idft1p6d	474	2	dialogue	dialogue	NN
cord-022053-idft1p6d	474	3	should	should	MD
cord-022053-idft1p6d	474	4	also	also	RB
cord-022053-idft1p6d	474	5	include	include	VB
cord-022053-idft1p6d	474	6	discussions	discussion	NNS
cord-022053-idft1p6d	474	7	of	of	IN
cord-022053-idft1p6d	474	8	molecular	molecular	JJ
cord-022053-idft1p6d	474	9	modalities	modality	NNS
cord-022053-idft1p6d	474	10	that	that	WDT
cord-022053-idft1p6d	474	11	are	be	VBP
cord-022053-idft1p6d	474	12	applied	apply	VBN
cord-022053-idft1p6d	474	13	to	to	IN
cord-022053-idft1p6d	474	14	clinical	clinical	JJ
cord-022053-idft1p6d	474	15	and	and	CC
cord-022053-idft1p6d	474	16	anatomic	anatomic	JJ
cord-022053-idft1p6d	474	17	pathology	pathology	NN
cord-022053-idft1p6d	474	18	specimens	specimen	NNS
cord-022053-idft1p6d	474	19	and	and	CC
cord-022053-idft1p6d	474	20	changes	change	NNS
cord-022053-idft1p6d	474	21	,	,	,
cord-022053-idft1p6d	474	22	advantages	advantage	NNS
cord-022053-idft1p6d	474	23	,	,	,
cord-022053-idft1p6d	474	24	pitfalls	pitfall	NNS
cord-022053-idft1p6d	474	25	,	,	,
cord-022053-idft1p6d	474	26	and	and	CC
cord-022053-idft1p6d	474	27	benefits	benefit	NNS
cord-022053-idft1p6d	474	28	of	of	IN
cord-022053-idft1p6d	474	29	those	those	DT
cord-022053-idft1p6d	474	30	modalities	modality	NNS
cord-022053-idft1p6d	474	31	in	in	IN
cord-022053-idft1p6d	474	32	an	an	DT
cord-022053-idft1p6d	474	33	ever	ever	RB
cord-022053-idft1p6d	474	34	-	-	HYPH
cord-022053-idft1p6d	474	35	evolving	evolve	VBG
cord-022053-idft1p6d	474	36	manner	manner	NN
cord-022053-idft1p6d	474	37	.	.	.
cord-022053-idft1p6d	475	1	As	as	IN
cord-022053-idft1p6d	475	2	with	with	IN
cord-022053-idft1p6d	475	3	any	any	DT
cord-022053-idft1p6d	475	4	approach	approach	NN
cord-022053-idft1p6d	475	5	to	to	IN
cord-022053-idft1p6d	475	6	medicine	medicine	NN
cord-022053-idft1p6d	475	7	,	,	,
cord-022053-idft1p6d	475	8	evidence	evidence	NN
cord-022053-idft1p6d	475	9	-	-	HYPH
cord-022053-idft1p6d	475	10	based	base	VBN
cord-022053-idft1p6d	475	11	use	use	NN
cord-022053-idft1p6d	475	12	of	of	IN
cord-022053-idft1p6d	475	13	the	the	DT
cord-022053-idft1p6d	475	14	most	most	RBS
cord-022053-idft1p6d	475	15	efficient	efficient	JJ
cord-022053-idft1p6d	475	16	and	and	CC
cord-022053-idft1p6d	475	17	inexpensive	inexpensive	JJ
cord-022053-idft1p6d	475	18	method	method	NN
cord-022053-idft1p6d	475	19	that	that	WDT
cord-022053-idft1p6d	475	20	produces	produce	VBZ
cord-022053-idft1p6d	475	21	the	the	DT
cord-022053-idft1p6d	475	22	highest	high	JJS
cord-022053-idft1p6d	475	23	-	-	HYPH
cord-022053-idft1p6d	475	24	impact	impact	NN
cord-022053-idft1p6d	475	25	result	result	NN
cord-022053-idft1p6d	475	26	for	for	IN
cord-022053-idft1p6d	475	27	the	the	DT
cord-022053-idft1p6d	475	28	patient	patient	NN
cord-022053-idft1p6d	475	29	is	be	VBZ
cord-022053-idft1p6d	475	30	the	the	DT
cord-022053-idft1p6d	475	31	constant	constant	JJ
cord-022053-idft1p6d	475	32	goal	goal	NN
cord-022053-idft1p6d	475	33	.	.	.
cord-022053-idft1p6d	476	1	MS	MS	NNP
cord-022053-idft1p6d	476	2	technology	technology	NN
cord-022053-idft1p6d	476	3	for	for	IN
cord-022053-idft1p6d	476	4	microorganism	microorganism	NN
cord-022053-idft1p6d	476	5	identification	identification	NN
cord-022053-idft1p6d	476	6	in	in	IN
cord-022053-idft1p6d	476	7	a	a	DT
cord-022053-idft1p6d	476	8	public	public	JJ
cord-022053-idft1p6d	476	9	health	health	NN
cord-022053-idft1p6d	476	10	reference	reference	NN
cord-022053-idft1p6d	476	11	laboratory	laboratory	NN
cord-022053-idft1p6d	477	1	Ongoing	ongoing	JJ
cord-022053-idft1p6d	477	2	revolution	revolution	NN
cord-022053-idft1p6d	477	3	in	in	IN
cord-022053-idft1p6d	477	4	bacteriology	bacteriology	NN
cord-022053-idft1p6d	477	5	:	:	:
cord-022053-idft1p6d	477	6	routine	routine	JJ
cord-022053-idft1p6d	477	7	identification	identification	NN
cord-022053-idft1p6d	477	8	of	of	IN
cord-022053-idft1p6d	477	9	bacteria	bacteria	NNS
cord-022053-idft1p6d	477	10	by	by	IN
cord-022053-idft1p6d	477	11	matrix	matrix	NN
cord-022053-idft1p6d	477	12	-	-	HYPH
cord-022053-idft1p6d	477	13	assisted	assist	VBN
cord-022053-idft1p6d	477	14	laser	laser	NN
cord-022053-idft1p6d	477	15	desorption	desorption	NN
cord-022053-idft1p6d	477	16	ionization	ionization	NN
cord-022053-idft1p6d	477	17	time	time	NN
cord-022053-idft1p6d	477	18	-	-	HYPH
cord-022053-idft1p6d	477	19	of	of	IN
cord-022053-idft1p6d	477	20	-	-	HYPH
cord-022053-idft1p6d	477	21	flight	flight	NN
cord-022053-idft1p6d	477	22	mass	mass	NN
cord-022053-idft1p6d	477	23	spectrometry	spectrometry	NN
cord-022053-idft1p6d	477	24	Bruker	Bruker	NNP
cord-022053-idft1p6d	477	25	biotyper	biotyper	NN
cord-022053-idft1p6d	477	26	matrix	matrix	NN
cord-022053-idft1p6d	477	27	-	-	HYPH
cord-022053-idft1p6d	477	28	assisted	assist	VBN
cord-022053-idft1p6d	477	29	laser	laser	NN
cord-022053-idft1p6d	477	30	desorption	desorption	NN
cord-022053-idft1p6d	477	31	ionization	ionization	NN
cord-022053-idft1p6d	477	32	-	-	HYPH
cord-022053-idft1p6d	477	33	time	time	NN
cord-022053-idft1p6d	477	34	of	of	IN
cord-022053-idft1p6d	477	35	flight	flight	NN
cord-022053-idft1p6d	477	36	mass	mass	NN
cord-022053-idft1p6d	477	37	spectrometry	spectrometry	NN
cord-022053-idft1p6d	477	38	system	system	NN
cord-022053-idft1p6d	477	39	for	for	IN
cord-022053-idft1p6d	477	40	identification	identification	NN
cord-022053-idft1p6d	477	41	of	of	IN
cord-022053-idft1p6d	477	42	Nocardia	Nocardia	NNP
cord-022053-idft1p6d	477	43	,	,	,
cord-022053-idft1p6d	477	44	Rhodococcus	Rhodococcus	NNP
cord-022053-idft1p6d	477	45	,	,	,
cord-022053-idft1p6d	477	46	Kocuria	Kocuria	NNP
cord-022053-idft1p6d	477	47	,	,	,
cord-022053-idft1p6d	477	48	Gordonia	Gordonia	NNP
cord-022053-idft1p6d	477	49	,	,	,
cord-022053-idft1p6d	477	50	Tsukamurella	Tsukamurella	NNP
cord-022053-idft1p6d	477	51	,	,	,
cord-022053-idft1p6d	477	52	and	and	CC
cord-022053-idft1p6d	477	53	Listeria	Listeria	NNP
cord-022053-idft1p6d	477	54	species	specie	VBZ
cord-022053-idft1p6d	477	55	Evaluation	Evaluation	NNP
cord-022053-idft1p6d	477	56	of	of	IN
cord-022053-idft1p6d	477	57	the	the	DT
cord-022053-idft1p6d	477	58	Bruker	Bruker	NNP
cord-022053-idft1p6d	477	59	MALDI	MALDI	NNP
cord-022053-idft1p6d	477	60	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	477	61	for	for	IN
cord-022053-idft1p6d	477	62	identification	identification	NN
cord-022053-idft1p6d	477	63	of	of	IN
cord-022053-idft1p6d	477	64	Gram	gram	NN
cord-022053-idft1p6d	477	65	-	-	HYPH
cord-022053-idft1p6d	477	66	positive	positive	JJ
cord-022053-idft1p6d	477	67	rods	rod	NNS
cord-022053-idft1p6d	477	68	:	:	:
cord-022053-idft1p6d	477	69	development	development	NN
cord-022053-idft1p6d	477	70	of	of	IN
cord-022053-idft1p6d	477	71	a	a	DT
cord-022053-idft1p6d	477	72	diagnostic	diagnostic	JJ
cord-022053-idft1p6d	477	73	algorithm	algorithm	NN
cord-022053-idft1p6d	477	74	for	for	IN
cord-022053-idft1p6d	477	75	the	the	DT
cord-022053-idft1p6d	477	76	clinical	clinical	JJ
cord-022053-idft1p6d	477	77	laboratory	laboratory	NN
cord-022053-idft1p6d	478	1	Multicenter	multicenter	JJ
cord-022053-idft1p6d	478	2	evaluation	evaluation	NN
cord-022053-idft1p6d	478	3	of	of	IN
cord-022053-idft1p6d	478	4	the	the	DT
cord-022053-idft1p6d	478	5	Vitek	Vitek	NNP
cord-022053-idft1p6d	478	6	MS	MS	NNP
cord-022053-idft1p6d	478	7	matrix	matrix	NN
cord-022053-idft1p6d	478	8	-	-	HYPH
cord-022053-idft1p6d	478	9	assisted	assist	VBN
cord-022053-idft1p6d	478	10	laser	laser	NN
cord-022053-idft1p6d	478	11	desorption	desorption	NN
cord-022053-idft1p6d	478	12	ionization	ionization	NN
cord-022053-idft1p6d	478	13	-	-	HYPH
cord-022053-idft1p6d	478	14	time	time	NN
cord-022053-idft1p6d	478	15	of	of	IN
cord-022053-idft1p6d	478	16	flight	flight	NN
cord-022053-idft1p6d	478	17	mass	mass	NN
cord-022053-idft1p6d	478	18	spectrometry	spectrometry	NN
cord-022053-idft1p6d	478	19	system	system	NN
cord-022053-idft1p6d	478	20	for	for	IN
cord-022053-idft1p6d	478	21	identification	identification	NN
cord-022053-idft1p6d	478	22	of	of	IN
cord-022053-idft1p6d	478	23	Gram	gram	NN
cord-022053-idft1p6d	478	24	-	-	HYPH
cord-022053-idft1p6d	478	25	positive	positive	JJ
cord-022053-idft1p6d	478	26	aerobic	aerobic	JJ
cord-022053-idft1p6d	478	27	bacteria	bacteria	NNS
cord-022053-idft1p6d	478	28	Kocuria	Kocuria	NNP
cord-022053-idft1p6d	478	29	rhizophila	rhizophila	NN
cord-022053-idft1p6d	478	30	misidentified	misidentifie	VBN
cord-022053-idft1p6d	478	31	as	as	IN
cord-022053-idft1p6d	478	32	Corynebacterium	Corynebacterium	NNP
cord-022053-idft1p6d	478	33	jeikeium	jeikeium	NN
cord-022053-idft1p6d	478	34	and	and	CC
cord-022053-idft1p6d	478	35	other	other	JJ
cord-022053-idft1p6d	478	36	errors	error	NNS
cord-022053-idft1p6d	478	37	caused	cause	VBN
cord-022053-idft1p6d	478	38	by	by	IN
cord-022053-idft1p6d	478	39	the	the	DT
cord-022053-idft1p6d	478	40	Vitek	Vitek	NNP
cord-022053-idft1p6d	478	41	MS	MS	NNP
cord-022053-idft1p6d	478	42	system	system	NN
cord-022053-idft1p6d	478	43	call	call	NN
cord-022053-idft1p6d	478	44	for	for	IN
cord-022053-idft1p6d	478	45	maintained	maintain	VBN
cord-022053-idft1p6d	478	46	microbiological	microbiological	JJ
cord-022053-idft1p6d	478	47	competence	competence	NN
cord-022053-idft1p6d	478	48	in	in	IN
cord-022053-idft1p6d	478	49	the	the	DT
cord-022053-idft1p6d	478	50	era	era	NN
cord-022053-idft1p6d	478	51	of	of	IN
cord-022053-idft1p6d	478	52	matrix	matrix	NN
cord-022053-idft1p6d	478	53	-	-	HYPH
cord-022053-idft1p6d	478	54	assisted	assist	VBN
cord-022053-idft1p6d	478	55	laser	laser	NN
cord-022053-idft1p6d	478	56	desorption	desorption	NN
cord-022053-idft1p6d	478	57	ionization	ionization	NN
cord-022053-idft1p6d	478	58	-	-	HYPH
cord-022053-idft1p6d	478	59	time	time	NN
cord-022053-idft1p6d	478	60	of	of	IN
cord-022053-idft1p6d	478	61	flight	flight	NN
cord-022053-idft1p6d	478	62	mass	mass	NN
cord-022053-idft1p6d	478	63	spectrometry	spectrometry	NN
cord-022053-idft1p6d	478	64	Importance	importance	NN
cord-022053-idft1p6d	478	65	of	of	IN
cord-022053-idft1p6d	478	66	using	use	VBG
cord-022053-idft1p6d	478	67	Bruker	Bruker	NNP
cord-022053-idft1p6d	478	68	's	's	POS
cord-022053-idft1p6d	478	69	securityrelevant	securityrelevant	JJ
cord-022053-idft1p6d	478	70	library	library	NN
cord-022053-idft1p6d	478	71	for	for	IN
cord-022053-idft1p6d	478	72	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	478	73	identification	identification	NN
cord-022053-idft1p6d	478	74	of	of	IN
cord-022053-idft1p6d	478	75	Burkholderia	Burkholderia	NNP
cord-022053-idft1p6d	478	76	pseudomallei	pseudomallei	NN
cord-022053-idft1p6d	478	77	,	,	,
cord-022053-idft1p6d	478	78	Brucella	Brucella	NNP
cord-022053-idft1p6d	478	79	species	specie	NNS
cord-022053-idft1p6d	478	80	,	,	,
cord-022053-idft1p6d	478	81	and	and	CC
cord-022053-idft1p6d	478	82	Francisella	Francisella	NNP
cord-022053-idft1p6d	478	83	tularensis	tularensis	NNP
cord-022053-idft1p6d	478	84	Matrix	Matrix	NNP
cord-022053-idft1p6d	478	85	-	-	HYPH
cord-022053-idft1p6d	478	86	assisted	assist	VBN
cord-022053-idft1p6d	478	87	laser	laser	NN
cord-022053-idft1p6d	478	88	desorption	desorption	NN
cord-022053-idft1p6d	478	89	/	/	SYM
cord-022053-idft1p6d	478	90	ionization	ionization	NN
cord-022053-idft1p6d	478	91	time	time	NN
cord-022053-idft1p6d	478	92	-	-	HYPH
cord-022053-idft1p6d	478	93	of	of	IN
cord-022053-idft1p6d	478	94	-	-	HYPH
cord-022053-idft1p6d	478	95	flight	flight	NN
cord-022053-idft1p6d	478	96	mass	mass	NN
cord-022053-idft1p6d	478	97	spectrometry	spectrometry	NN
cord-022053-idft1p6d	478	98	:	:	:
cord-022053-idft1p6d	478	99	a	a	DT
cord-022053-idft1p6d	478	100	new	new	JJ
cord-022053-idft1p6d	478	101	possibility	possibility	NN
cord-022053-idft1p6d	478	102	for	for	IN
cord-022053-idft1p6d	478	103	the	the	DT
cord-022053-idft1p6d	478	104	identification	identification	NN
cord-022053-idft1p6d	478	105	and	and	CC
cord-022053-idft1p6d	478	106	typing	typing	NN
cord-022053-idft1p6d	478	107	of	of	IN
cord-022053-idft1p6d	478	108	anaerobic	anaerobic	JJ
cord-022053-idft1p6d	478	109	bacteria	bacteria	NNS
cord-022053-idft1p6d	478	110	Multi	multi	JJ
cord-022053-idft1p6d	478	111	-	-	JJ
cord-022053-idft1p6d	478	112	centre	centre	JJ
cord-022053-idft1p6d	478	113	evaluation	evaluation	NN
cord-022053-idft1p6d	478	114	of	of	IN
cord-022053-idft1p6d	478	115	mass	mass	JJ
cord-022053-idft1p6d	478	116	spectrometric	spectrometric	JJ
cord-022053-idft1p6d	478	117	identification	identification	NN
cord-022053-idft1p6d	478	118	of	of	IN
cord-022053-idft1p6d	478	119	anaerobic	anaerobic	JJ
cord-022053-idft1p6d	478	120	bacteria	bacteria	NNS
cord-022053-idft1p6d	478	121	using	use	VBG
cord-022053-idft1p6d	478	122	the	the	DT
cord-022053-idft1p6d	478	123	VITEK(R	vitek(r	NN
cord-022053-idft1p6d	478	124	)	)	-RRB-
cord-022053-idft1p6d	479	1	MS	MS	NNP
cord-022053-idft1p6d	479	2	system	system	NN
cord-022053-idft1p6d	479	3	Anaerobic	anaerobic	JJ
cord-022053-idft1p6d	479	4	blood	blood	NN
cord-022053-idft1p6d	479	5	culture	culture	NN
cord-022053-idft1p6d	479	6	isolates	isolate	VBZ
cord-022053-idft1p6d	479	7	in	in	IN
cord-022053-idft1p6d	479	8	a	a	DT
cord-022053-idft1p6d	479	9	Norwegian	norwegian	JJ
cord-022053-idft1p6d	479	10	university	university	NN
cord-022053-idft1p6d	479	11	hospital	hospital	NN
cord-022053-idft1p6d	479	12	:	:	:
cord-022053-idft1p6d	479	13	identification	identification	NN
cord-022053-idft1p6d	479	14	by	by	IN
cord-022053-idft1p6d	479	15	MALDI	MALDI	NNP
cord-022053-idft1p6d	479	16	-	-	HYPH
cord-022053-idft1p6d	479	17	TOF	TOF	NNP
cord-022053-idft1p6d	479	18	MS	MS	NNP
cord-022053-idft1p6d	479	19	vs	vs	IN
cord-022053-idft1p6d	480	1	16S	16S	NNP
cord-022053-idft1p6d	480	2	rRNA	rrna	NN
cord-022053-idft1p6d	480	3	sequencing	sequencing	NN
cord-022053-idft1p6d	480	4	and	and	CC
cord-022053-idft1p6d	480	5	antimicrobial	antimicrobial	JJ
cord-022053-idft1p6d	480	6	susceptibility	susceptibility	NN
cord-022053-idft1p6d	480	7	profiles	profile	NNS
cord-022053-idft1p6d	480	8	ESCMID	ESCMID	NNP
cord-022053-idft1p6d	480	9	Study	Study	NNP
cord-022053-idft1p6d	480	10	Group	Group	NNP
cord-022053-idft1p6d	480	11	on	on	IN
cord-022053-idft1p6d	480	12	Antimicrobial	Antimicrobial	NNP
cord-022053-idft1p6d	480	13	Resistance	Resistance	NNP
cord-022053-idft1p6d	480	14	in	in	IN
cord-022053-idft1p6d	480	15	Anaerobic	Anaerobic	NNP
cord-022053-idft1p6d	480	16	Bacteria	Bacteria	NNS
cord-022053-idft1p6d	480	17	.	.	.
cord-022053-idft1p6d	481	1	Species	specie	NNS
cord-022053-idft1p6d	481	2	identification	identification	NN
cord-022053-idft1p6d	481	3	of	of	IN
cord-022053-idft1p6d	481	4	clinical	clinical	JJ
cord-022053-idft1p6d	481	5	isolates	isolate	NNS
cord-022053-idft1p6d	481	6	of	of	IN
cord-022053-idft1p6d	481	7	Bacteroides	Bacteroides	NNP
cord-022053-idft1p6d	481	8	by	by	IN
cord-022053-idft1p6d	481	9	matrixassisted	matrixassiste	VBN
cord-022053-idft1p6d	481	10	laser	laser	NN
cord-022053-idft1p6d	481	11	-	-	HYPH
cord-022053-idft1p6d	481	12	desorption	desorption	NN
cord-022053-idft1p6d	481	13	/	/	SYM
cord-022053-idft1p6d	481	14	ionization	ionization	NN
cord-022053-idft1p6d	481	15	time	time	NN
cord-022053-idft1p6d	481	16	-	-	HYPH
cord-022053-idft1p6d	481	17	of	of	IN
cord-022053-idft1p6d	481	18	-	-	HYPH
cord-022053-idft1p6d	481	19	flight	flight	NN
cord-022053-idft1p6d	481	20	mass	mass	NN
cord-022053-idft1p6d	481	21	spectrometry	spectrometry	NN
cord-022053-idft1p6d	481	22	Performance	performance	NN
cord-022053-idft1p6d	481	23	of	of	IN
cord-022053-idft1p6d	481	24	MALDI	MALDI	NNP
cord-022053-idft1p6d	481	25	-	-	HYPH
cord-022053-idft1p6d	481	26	TOF	TOF	NNP
cord-022053-idft1p6d	481	27	MS	MS	NNP
cord-022053-idft1p6d	481	28	platforms	platform	NNS
cord-022053-idft1p6d	481	29	for	for	IN
cord-022053-idft1p6d	481	30	fungal	fungal	JJ
cord-022053-idft1p6d	481	31	identification	identification	NN
cord-022053-idft1p6d	481	32	MALDI	MALDI	NNP
cord-022053-idft1p6d	481	33	-	-	HYPH
cord-022053-idft1p6d	481	34	TOF	TOF	NNP
cord-022053-idft1p6d	481	35	mass	mass	NN
cord-022053-idft1p6d	481	36	spectrometry	spectrometry	NN
cord-022053-idft1p6d	481	37	proteomic	proteomic	NN
cord-022053-idft1p6d	481	38	phenotyping	phenotyping	NN
cord-022053-idft1p6d	481	39	of	of	IN
cord-022053-idft1p6d	481	40	clinically	clinically	RB
cord-022053-idft1p6d	481	41	relevant	relevant	JJ
cord-022053-idft1p6d	481	42	fungi	fungus	NNS
cord-022053-idft1p6d	481	43	Improved	improve	VBD
cord-022053-idft1p6d	481	44	clinical	clinical	JJ
cord-022053-idft1p6d	481	45	laboratory	laboratory	NN
cord-022053-idft1p6d	481	46	identification	identification	NN
cord-022053-idft1p6d	481	47	of	of	IN
cord-022053-idft1p6d	481	48	human	human	JJ
cord-022053-idft1p6d	481	49	pathogenic	pathogenic	JJ
cord-022053-idft1p6d	481	50	yeasts	yeast	NNS
cord-022053-idft1p6d	481	51	by	by	IN
cord-022053-idft1p6d	481	52	matrix	matrix	NN
cord-022053-idft1p6d	481	53	-	-	HYPH
cord-022053-idft1p6d	481	54	assisted	assist	VBN
cord-022053-idft1p6d	481	55	laser	laser	NN
cord-022053-idft1p6d	481	56	desorption	desorption	NN
cord-022053-idft1p6d	481	57	ionization	ionization	NN
cord-022053-idft1p6d	481	58	time	time	NN
cord-022053-idft1p6d	481	59	-	-	HYPH
cord-022053-idft1p6d	481	60	offlight	offlight	VBN
cord-022053-idft1p6d	481	61	mass	mass	NN
cord-022053-idft1p6d	481	62	spectrometry	spectrometry	NN
cord-022053-idft1p6d	481	63	Comparison	comparison	NN
cord-022053-idft1p6d	481	64	of	of	IN
cord-022053-idft1p6d	481	65	the	the	DT
cord-022053-idft1p6d	481	66	accuracy	accuracy	NN
cord-022053-idft1p6d	481	67	of	of	IN
cord-022053-idft1p6d	481	68	two	two	CD
cord-022053-idft1p6d	481	69	conventional	conventional	JJ
cord-022053-idft1p6d	481	70	phenotypic	phenotypic	JJ
cord-022053-idft1p6d	481	71	methods	method	NNS
cord-022053-idft1p6d	481	72	and	and	CC
cord-022053-idft1p6d	481	73	two	two	CD
cord-022053-idft1p6d	481	74	MALDI	MALDI	NNS
cord-022053-idft1p6d	481	75	-	-	HYPH
cord-022053-idft1p6d	481	76	TOF	TOF	NNP
cord-022053-idft1p6d	481	77	MS	MS	NNP
cord-022053-idft1p6d	481	78	systems	system	NNS
cord-022053-idft1p6d	481	79	with	with	IN
cord-022053-idft1p6d	481	80	that	that	DT
cord-022053-idft1p6d	481	81	of	of	IN
cord-022053-idft1p6d	481	82	DNA	dna	NN
cord-022053-idft1p6d	481	83	sequencing	sequencing	NN
cord-022053-idft1p6d	481	84	analysis	analysis	NN
cord-022053-idft1p6d	481	85	for	for	IN
cord-022053-idft1p6d	481	86	correctly	correctly	RB
cord-022053-idft1p6d	481	87	identifying	identify	VBG
cord-022053-idft1p6d	481	88	clinically	clinically	RB
cord-022053-idft1p6d	481	89	encountered	encounter	VBN
cord-022053-idft1p6d	481	90	yeasts	yeast	NNS
cord-022053-idft1p6d	481	91	Comparative	comparative	JJ
cord-022053-idft1p6d	481	92	evaluation	evaluation	NN
cord-022053-idft1p6d	481	93	of	of	IN
cord-022053-idft1p6d	481	94	the	the	DT
cord-022053-idft1p6d	481	95	Bruker	Bruker	NNP
cord-022053-idft1p6d	481	96	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	481	97	and	and	CC
cord-022053-idft1p6d	481	98	Vitek	Vitek	NNP
cord-022053-idft1p6d	481	99	MS	MS	NNP
cord-022053-idft1p6d	481	100	matrix	matrix	NN
cord-022053-idft1p6d	481	101	-	-	HYPH
cord-022053-idft1p6d	481	102	assisted	assist	VBN
cord-022053-idft1p6d	481	103	laser	laser	NN
cord-022053-idft1p6d	481	104	desorption	desorption	NN
cord-022053-idft1p6d	481	105	ionization	ionization	NN
cord-022053-idft1p6d	481	106	-	-	HYPH
cord-022053-idft1p6d	481	107	time	time	NN
cord-022053-idft1p6d	481	108	of	of	IN
cord-022053-idft1p6d	481	109	flight	flight	NN
cord-022053-idft1p6d	481	110	(	(	-LRB-
cord-022053-idft1p6d	481	111	MALDI	MALDI	NNP
cord-022053-idft1p6d	481	112	-	-	HYPH
cord-022053-idft1p6d	481	113	TOF	TOF	NNP
cord-022053-idft1p6d	481	114	)	)	-RRB-
cord-022053-idft1p6d	481	115	mass	mass	NN
cord-022053-idft1p6d	481	116	spectrometry	spectrometry	NN
cord-022053-idft1p6d	481	117	systems	system	NNS
cord-022053-idft1p6d	481	118	for	for	IN
cord-022053-idft1p6d	481	119	identification	identification	NN
cord-022053-idft1p6d	481	120	of	of	IN
cord-022053-idft1p6d	481	121	yeasts	yeast	NNS
cord-022053-idft1p6d	481	122	of	of	IN
cord-022053-idft1p6d	481	123	medical	medical	JJ
cord-022053-idft1p6d	481	124	importance	importance	NN
cord-022053-idft1p6d	482	1	Interlaboratory	interlaboratory	JJ
cord-022053-idft1p6d	482	2	comparison	comparison	NN
cord-022053-idft1p6d	482	3	of	of	IN
cord-022053-idft1p6d	482	4	sample	sample	NN
cord-022053-idft1p6d	482	5	preparation	preparation	NN
cord-022053-idft1p6d	482	6	methods	method	NNS
cord-022053-idft1p6d	482	7	,	,	,
cord-022053-idft1p6d	482	8	database	database	NN
cord-022053-idft1p6d	482	9	expansions	expansion	NNS
cord-022053-idft1p6d	482	10	,	,	,
cord-022053-idft1p6d	482	11	and	and	CC
cord-022053-idft1p6d	482	12	cutoff	cutoff	NN
cord-022053-idft1p6d	482	13	values	value	NNS
cord-022053-idft1p6d	482	14	for	for	IN
cord-022053-idft1p6d	482	15	identification	identification	NN
cord-022053-idft1p6d	482	16	of	of	IN
cord-022053-idft1p6d	482	17	yeasts	yeast	NNS
cord-022053-idft1p6d	482	18	by	by	IN
cord-022053-idft1p6d	482	19	matrix	matrix	NN
cord-022053-idft1p6d	482	20	-	-	HYPH
cord-022053-idft1p6d	482	21	assisted	assist	VBN
cord-022053-idft1p6d	482	22	laser	laser	NN
cord-022053-idft1p6d	482	23	desorption	desorption	NN
cord-022053-idft1p6d	482	24	ionization	ionization	NN
cord-022053-idft1p6d	482	25	-	-	HYPH
cord-022053-idft1p6d	482	26	time	time	NN
cord-022053-idft1p6d	482	27	of	of	IN
cord-022053-idft1p6d	482	28	flight	flight	NN
cord-022053-idft1p6d	482	29	mass	mass	NN
cord-022053-idft1p6d	482	30	spectrometry	spectrometry	NN
cord-022053-idft1p6d	482	31	using	use	VBG
cord-022053-idft1p6d	482	32	a	a	DT
cord-022053-idft1p6d	482	33	yeast	yeast	NN
cord-022053-idft1p6d	482	34	test	test	NN
cord-022053-idft1p6d	482	35	panel	panel	NN
cord-022053-idft1p6d	482	36	Clinical	clinical	JJ
cord-022053-idft1p6d	482	37	performance	performance	NN
cord-022053-idft1p6d	482	38	evaluation	evaluation	NN
cord-022053-idft1p6d	482	39	of	of	IN
cord-022053-idft1p6d	482	40	the	the	DT
cord-022053-idft1p6d	482	41	Sofia	Sofia	NNP
cord-022053-idft1p6d	482	42	RSV	RSV	NNP
cord-022053-idft1p6d	482	43	FIA	FIA	NNP
cord-022053-idft1p6d	482	44	rapid	rapid	JJ
cord-022053-idft1p6d	482	45	antigen	antigen	NN
cord-022053-idft1p6d	482	46	test	test	NN
cord-022053-idft1p6d	482	47	for	for	IN
cord-022053-idft1p6d	482	48	diagnosis	diagnosis	NN
cord-022053-idft1p6d	482	49	of	of	IN
cord-022053-idft1p6d	482	50	respiratory	respiratory	JJ
cord-022053-idft1p6d	482	51	syncytial	syncytial	JJ
cord-022053-idft1p6d	482	52	virus	virus	NN
cord-022053-idft1p6d	482	53	infection	infection	NN
cord-022053-idft1p6d	482	54	Serological	serological	JJ
cord-022053-idft1p6d	482	55	markers	marker	NNS
cord-022053-idft1p6d	482	56	in	in	IN
cord-022053-idft1p6d	482	57	early	early	JJ
cord-022053-idft1p6d	482	58	stages	stage	NNS
cord-022053-idft1p6d	482	59	of	of	IN
cord-022053-idft1p6d	482	60	human	human	JJ
cord-022053-idft1p6d	482	61	immunodeficiency	immunodeficiency	NN
cord-022053-idft1p6d	482	62	virus	virus	NN
cord-022053-idft1p6d	482	63	infection	infection	NN
cord-022053-idft1p6d	482	64	in	in	IN
cord-022053-idft1p6d	482	65	haemophiliacs	haemophiliacs	NNP
cord-022053-idft1p6d	482	66	Matrix	Matrix	NNP
cord-022053-idft1p6d	482	67	-	-	HYPH
cord-022053-idft1p6d	482	68	assisted	assist	VBN
cord-022053-idft1p6d	482	69	laser	laser	NN
cord-022053-idft1p6d	482	70	desorption	desorption	NN
cord-022053-idft1p6d	482	71	ionization	ionization	NN
cord-022053-idft1p6d	482	72	-	-	HYPH
cord-022053-idft1p6d	482	73	time	time	NN
cord-022053-idft1p6d	482	74	of	of	IN
cord-022053-idft1p6d	482	75	flight	flight	NN
cord-022053-idft1p6d	482	76	mass	mass	NN
cord-022053-idft1p6d	482	77	spectrometry	spectrometry	NN
cord-022053-idft1p6d	482	78	:	:	:
cord-022053-idft1p6d	482	79	a	a	DT
cord-022053-idft1p6d	482	80	fundamental	fundamental	JJ
cord-022053-idft1p6d	482	81	shift	shift	NN
cord-022053-idft1p6d	482	82	in	in	IN
cord-022053-idft1p6d	482	83	the	the	DT
cord-022053-idft1p6d	482	84	routine	routine	JJ
cord-022053-idft1p6d	482	85	practice	practice	NN
cord-022053-idft1p6d	482	86	of	of	IN
cord-022053-idft1p6d	482	87	clinical	clinical	JJ
cord-022053-idft1p6d	482	88	microbiology	microbiology	NN
cord-022053-idft1p6d	482	89	Matrix	Matrix	NNP
cord-022053-idft1p6d	482	90	-	-	HYPH
cord-022053-idft1p6d	482	91	assisted	assist	VBN
cord-022053-idft1p6d	482	92	laser	laser	NN
cord-022053-idft1p6d	482	93	desorption	desorption	NN
cord-022053-idft1p6d	482	94	ionization	ionization	NN
cord-022053-idft1p6d	482	95	-	-	HYPH
cord-022053-idft1p6d	482	96	time	time	NN
cord-022053-idft1p6d	482	97	of	of	IN
cord-022053-idft1p6d	482	98	flight	flight	NN
cord-022053-idft1p6d	482	99	mass	mass	NN
cord-022053-idft1p6d	482	100	spectrometry	spectrometry	NN
cord-022053-idft1p6d	482	101	in	in	IN
cord-022053-idft1p6d	482	102	clinical	clinical	JJ
cord-022053-idft1p6d	482	103	microbiology	microbiology	NN
cord-022053-idft1p6d	482	104	MS	MS	NNP
cord-022053-idft1p6d	482	105	for	for	IN
cord-022053-idft1p6d	482	106	the	the	DT
cord-022053-idft1p6d	482	107	diagnosis	diagnosis	NN
cord-022053-idft1p6d	482	108	of	of	IN
cord-022053-idft1p6d	482	109	infectious	infectious	JJ
cord-022053-idft1p6d	482	110	diseases	disease	NNS
cord-022053-idft1p6d	483	1	A	a	DT
cord-022053-idft1p6d	483	2	side	side	NN
cord-022053-idft1p6d	483	3	by	by	IN
cord-022053-idft1p6d	483	4	side	side	JJ
cord-022053-idft1p6d	483	5	comparison	comparison	NN
cord-022053-idft1p6d	483	6	of	of	IN
cord-022053-idft1p6d	483	7	Bruker	Bruker	NNP
cord-022053-idft1p6d	483	8	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	483	9	and	and	CC
cord-022053-idft1p6d	483	10	VITEK	VITEK	NNP
cord-022053-idft1p6d	483	11	MS	MS	NNP
cord-022053-idft1p6d	483	12	:	:	:
cord-022053-idft1p6d	483	13	utility	utility	NN
cord-022053-idft1p6d	483	14	of	of	IN
cord-022053-idft1p6d	483	15	screening	screening	NN
cord-022053-idft1p6d	483	16	methods	method	NNS
cord-022053-idft1p6d	483	17	and	and	CC
cord-022053-idft1p6d	483	18	matrix	matrix	NN
cord-022053-idft1p6d	483	19	-	-	HYPH
cord-022053-idft1p6d	483	20	assisted	assist	VBN
cord-022053-idft1p6d	483	21	laser	laser	NN
cord-022053-idft1p6d	483	22	desorption	desorption	NN
cord-022053-idft1p6d	483	23	ionizationtime	ionizationtime	NN
cord-022053-idft1p6d	483	24	of	of	IN
cord-022053-idft1p6d	483	25	flight	flight	NN
cord-022053-idft1p6d	483	26	mass	mass	NN
cord-022053-idft1p6d	483	27	spectrometry	spectrometry	NN
cord-022053-idft1p6d	483	28	Direct	direct	JJ
cord-022053-idft1p6d	483	29	identification	identification	NN
cord-022053-idft1p6d	483	30	of	of	IN
cord-022053-idft1p6d	483	31	urinary	urinary	JJ
cord-022053-idft1p6d	483	32	tract	tract	NN
cord-022053-idft1p6d	483	33	pathogens	pathogen	NNS
cord-022053-idft1p6d	483	34	from	from	IN
cord-022053-idft1p6d	483	35	urine	urine	NN
cord-022053-idft1p6d	483	36	samples	sample	NNS
cord-022053-idft1p6d	483	37	using	use	VBG
cord-022053-idft1p6d	483	38	the	the	DT
cord-022053-idft1p6d	483	39	Vitek	Vitek	NNP
cord-022053-idft1p6d	483	40	MS	MS	NNP
cord-022053-idft1p6d	483	41	system	system	NN
cord-022053-idft1p6d	483	42	based	base	VBN
cord-022053-idft1p6d	483	43	on	on	IN
cord-022053-idft1p6d	483	44	matrix	matrix	NN
cord-022053-idft1p6d	483	45	-	-	HYPH
cord-022053-idft1p6d	483	46	assisted	assist	VBN
cord-022053-idft1p6d	483	47	laser	laser	NN
cord-022053-idft1p6d	483	48	desorption	desorption	NN
cord-022053-idft1p6d	483	49	ionization	ionization	NN
cord-022053-idft1p6d	483	50	-	-	HYPH
cord-022053-idft1p6d	483	51	time	time	NN
cord-022053-idft1p6d	483	52	of	of	IN
cord-022053-idft1p6d	483	53	flight	flight	NN
cord-022053-idft1p6d	483	54	mass	mass	NN
cord-022053-idft1p6d	483	55	spectrometry	spectrometry	NN
cord-022053-idft1p6d	483	56	Mass	mass	NN
cord-022053-idft1p6d	483	57	spectrometry	spectrometry	NN
cord-022053-idft1p6d	483	58	:	:	:
cord-022053-idft1p6d	483	59	pneumococcal	pneumococcal	JJ
cord-022053-idft1p6d	483	60	meningitis	meningitis	NN
cord-022053-idft1p6d	483	61	verified	verify	VBN
cord-022053-idft1p6d	483	62	and	and	CC
cord-022053-idft1p6d	483	63	Brucella	Brucella	NNP
cord-022053-idft1p6d	483	64	species	specie	NNS
cord-022053-idft1p6d	483	65	identified	identify	VBN
cord-022053-idft1p6d	483	66	in	in	IN
cord-022053-idft1p6d	483	67	less	less	JJR
cord-022053-idft1p6d	483	68	than	than	IN
cord-022053-idft1p6d	483	69	half	half	PDT
cord-022053-idft1p6d	483	70	an	an	DT
cord-022053-idft1p6d	483	71	hour	hour	NN
cord-022053-idft1p6d	483	72	Direct	direct	JJ
cord-022053-idft1p6d	483	73	application	application	NN
cord-022053-idft1p6d	483	74	of	of	IN
cord-022053-idft1p6d	483	75	MALDI	MALDI	NNP
cord-022053-idft1p6d	483	76	-	-	HYPH
cord-022053-idft1p6d	483	77	TOF	TOF	NNP
cord-022053-idft1p6d	483	78	mass	mass	NN
cord-022053-idft1p6d	483	79	spectrometry	spectrometry	NN
cord-022053-idft1p6d	483	80	to	to	IN
cord-022053-idft1p6d	483	81	cerebrospinal	cerebrospinal	JJ
cord-022053-idft1p6d	483	82	fluid	fluid	NN
cord-022053-idft1p6d	483	83	for	for	IN
cord-022053-idft1p6d	483	84	rapid	rapid	JJ
cord-022053-idft1p6d	483	85	pathogen	pathogen	NN
cord-022053-idft1p6d	483	86	identification	identification	NN
cord-022053-idft1p6d	483	87	in	in	IN
cord-022053-idft1p6d	483	88	a	a	DT
cord-022053-idft1p6d	483	89	patient	patient	NN
cord-022053-idft1p6d	483	90	with	with	IN
cord-022053-idft1p6d	483	91	bacterial	bacterial	JJ
cord-022053-idft1p6d	483	92	meningitis	meningitis	NN
cord-022053-idft1p6d	483	93	Sample	sample	NN
cord-022053-idft1p6d	483	94	preparation	preparation	NN
cord-022053-idft1p6d	483	95	for	for	IN
cord-022053-idft1p6d	483	96	mass	mass	JJ
cord-022053-idft1p6d	483	97	spectrometry	spectrometry	NN
cord-022053-idft1p6d	483	98	analysis	analysis	NN
cord-022053-idft1p6d	483	99	of	of	IN
cord-022053-idft1p6d	483	100	formalin	formalin	NN
cord-022053-idft1p6d	483	101	-	-	HYPH
cord-022053-idft1p6d	483	102	fixed	fix	VBN
cord-022053-idft1p6d	483	103	paraffin	paraffin	NN
cord-022053-idft1p6d	483	104	-	-	HYPH
cord-022053-idft1p6d	483	105	embedded	embed	VBN
cord-022053-idft1p6d	483	106	tissue	tissue	NN
cord-022053-idft1p6d	483	107	:	:	:
cord-022053-idft1p6d	483	108	proteomic	proteomic	JJ
cord-022053-idft1p6d	483	109	analysis	analysis	NN
cord-022053-idft1p6d	483	110	of	of	IN
cord-022053-idft1p6d	483	111	formalin	formalin	NN
cord-022053-idft1p6d	483	112	-	-	HYPH
cord-022053-idft1p6d	483	113	fixed	fix	VBN
cord-022053-idft1p6d	483	114	tissue	tissue	NN
cord-022053-idft1p6d	483	115	Urinary	urinary	JJ
cord-022053-idft1p6d	483	116	pellet	pellet	NN
cord-022053-idft1p6d	483	117	sample	sample	NN
cord-022053-idft1p6d	483	118	preparation	preparation	NN
cord-022053-idft1p6d	483	119	for	for	IN
cord-022053-idft1p6d	483	120	shotgun	shotgun	NN
cord-022053-idft1p6d	483	121	proteomic	proteomic	JJ
cord-022053-idft1p6d	483	122	analysis	analysis	NN
cord-022053-idft1p6d	483	123	of	of	IN
cord-022053-idft1p6d	483	124	microbial	microbial	JJ
cord-022053-idft1p6d	483	125	infection	infection	NN
cord-022053-idft1p6d	483	126	and	and	CC
cord-022053-idft1p6d	484	1	host	host	NN
cord-022053-idft1p6d	484	2	-	-	HYPH
cord-022053-idft1p6d	484	3	pathogen	pathogen	NN
cord-022053-idft1p6d	484	4	interactions	interaction	NNS
cord-022053-idft1p6d	484	5	PNA	PNA	NNP
cord-022053-idft1p6d	484	6	for	for	IN
cord-022053-idft1p6d	484	7	rapid	rapid	JJ
cord-022053-idft1p6d	484	8	microbiology	microbiology	NN
cord-022053-idft1p6d	484	9	Peptide	Peptide	NNP
cord-022053-idft1p6d	484	10	nucleic	nucleic	JJ
cord-022053-idft1p6d	484	11	acid	acid	NN
cord-022053-idft1p6d	484	12	fluorescence	fluorescence	NN
cord-022053-idft1p6d	484	13	in	in	IN
cord-022053-idft1p6d	484	14	situ	situ	JJ
cord-022053-idft1p6d	484	15	hybridization	hybridization	NN
cord-022053-idft1p6d	484	16	for	for	IN
cord-022053-idft1p6d	484	17	rapid	rapid	JJ
cord-022053-idft1p6d	484	18	detection	detection	NN
cord-022053-idft1p6d	484	19	of	of	IN
cord-022053-idft1p6d	484	20	Klebsiella	Klebsiella	NNP
cord-022053-idft1p6d	484	21	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	484	22	from	from	IN
cord-022053-idft1p6d	484	23	positive	positive	JJ
cord-022053-idft1p6d	484	24	blood	blood	NN
cord-022053-idft1p6d	484	25	cultures	culture	NNS
cord-022053-idft1p6d	484	26	Direct	direct	JJ
cord-022053-idft1p6d	484	27	identification	identification	NN
cord-022053-idft1p6d	484	28	of	of	IN
cord-022053-idft1p6d	484	29	major	major	JJ
cord-022053-idft1p6d	484	30	blood	blood	NN
cord-022053-idft1p6d	484	31	culture	culture	NN
cord-022053-idft1p6d	484	32	pathogens	pathogen	NNS
cord-022053-idft1p6d	484	33	,	,	,
cord-022053-idft1p6d	484	34	including	include	VBG
cord-022053-idft1p6d	484	35	Pseudomonas	Pseudomonas	NNP
cord-022053-idft1p6d	484	36	aeruginosa	aeruginosa	NN
cord-022053-idft1p6d	484	37	and	and	CC
cord-022053-idft1p6d	484	38	Escherichia	Escherichia	NNP
cord-022053-idft1p6d	484	39	coli	coli	NNS
cord-022053-idft1p6d	484	40	,	,	,
cord-022053-idft1p6d	484	41	by	by	IN
cord-022053-idft1p6d	484	42	a	a	DT
cord-022053-idft1p6d	484	43	panel	panel	NN
cord-022053-idft1p6d	484	44	of	of	IN
cord-022053-idft1p6d	484	45	fluorescence	fluorescence	NN
cord-022053-idft1p6d	484	46	in	in	IN
cord-022053-idft1p6d	484	47	situ	situ	NN
cord-022053-idft1p6d	484	48	hybridization	hybridization	NN
cord-022053-idft1p6d	484	49	assays	assay	NNS
cord-022053-idft1p6d	484	50	using	use	VBG
cord-022053-idft1p6d	484	51	peptide	peptide	JJ
cord-022053-idft1p6d	484	52	nucleic	nucleic	JJ
cord-022053-idft1p6d	484	53	acid	acid	NN
cord-022053-idft1p6d	484	54	probes	probe	NNS
cord-022053-idft1p6d	484	55	Rapid	rapid	JJ
cord-022053-idft1p6d	484	56	identification	identification	NN
cord-022053-idft1p6d	484	57	of	of	IN
cord-022053-idft1p6d	484	58	Staphylococcus	Staphylococcus	NNP
cord-022053-idft1p6d	484	59	aureus	aureu	NNS
cord-022053-idft1p6d	484	60	directly	directly	RB
cord-022053-idft1p6d	484	61	from	from	IN
cord-022053-idft1p6d	484	62	blood	blood	NN
cord-022053-idft1p6d	484	63	cultures	culture	NNS
cord-022053-idft1p6d	484	64	by	by	IN
cord-022053-idft1p6d	484	65	fluorescence	fluorescence	NN
cord-022053-idft1p6d	484	66	in	in	IN
cord-022053-idft1p6d	484	67	situ	situ	NN
cord-022053-idft1p6d	484	68	hybridization	hybridization	NN
cord-022053-idft1p6d	484	69	with	with	IN
cord-022053-idft1p6d	484	70	peptide	peptide	JJ
cord-022053-idft1p6d	484	71	nucleic	nucleic	JJ
cord-022053-idft1p6d	484	72	acid	acid	NN
cord-022053-idft1p6d	484	73	probes	probe	NNS
cord-022053-idft1p6d	484	74	Rapid	rapid	JJ
cord-022053-idft1p6d	484	75	detection	detection	NN
cord-022053-idft1p6d	484	76	of	of	IN
cord-022053-idft1p6d	484	77	Enterococcus	Enterococcus	NNP
cord-022053-idft1p6d	484	78	spp	spp	NNS
cord-022053-idft1p6d	484	79	.	.	.
cord-022053-idft1p6d	485	1	direct	direct	RB
cord-022053-idft1p6d	485	2	from	from	IN
cord-022053-idft1p6d	485	3	blood	blood	NN
cord-022053-idft1p6d	485	4	culture	culture	NN
cord-022053-idft1p6d	485	5	bottles	bottle	NNS
cord-022053-idft1p6d	485	6	using	use	VBG
cord-022053-idft1p6d	485	7	Enterococcus	Enterococcus	NNP
cord-022053-idft1p6d	485	8	QuickFISH	QuickFISH	NNP
cord-022053-idft1p6d	485	9	method	method	NN
cord-022053-idft1p6d	485	10	:	:	:
cord-022053-idft1p6d	485	11	a	a	DT
cord-022053-idft1p6d	485	12	multicenter	multicenter	JJ
cord-022053-idft1p6d	485	13	investigation	investigation	NN
cord-022053-idft1p6d	485	14	Development	Development	NNP
cord-022053-idft1p6d	485	15	of	of	IN
cord-022053-idft1p6d	485	16	a	a	DT
cord-022053-idft1p6d	485	17	peptide	peptide	NN
cord-022053-idft1p6d	485	18	nucleic	nucleic	JJ
cord-022053-idft1p6d	485	19	acid	acid	NN
cord-022053-idft1p6d	485	20	probe	probe	NN
cord-022053-idft1p6d	485	21	to	to	IN
cord-022053-idft1p6d	485	22	Trichosporon	Trichosporon	NNP
cord-022053-idft1p6d	485	23	species	specie	NNS
cord-022053-idft1p6d	485	24	and	and	CC
cord-022053-idft1p6d	485	25	identification	identification	NN
cord-022053-idft1p6d	485	26	of	of	IN
cord-022053-idft1p6d	485	27	trichosporonosis	trichosporonosis	NNP
cord-022053-idft1p6d	485	28	by	by	IN
cord-022053-idft1p6d	485	29	use	use	NN
cord-022053-idft1p6d	485	30	of	of	IN
cord-022053-idft1p6d	485	31	in	in	IN
cord-022053-idft1p6d	485	32	situ	situ	NN
cord-022053-idft1p6d	485	33	hybridization	hybridization	NN
cord-022053-idft1p6d	485	34	in	in	IN
cord-022053-idft1p6d	485	35	formalin	formalin	NN
cord-022053-idft1p6d	485	36	-	-	HYPH
cord-022053-idft1p6d	485	37	fixed	fix	VBN
cord-022053-idft1p6d	485	38	and	and	CC
cord-022053-idft1p6d	485	39	paraffin	paraffin	NN
cord-022053-idft1p6d	485	40	-	-	HYPH
cord-022053-idft1p6d	485	41	embedded	embed	VBN
cord-022053-idft1p6d	485	42	(	(	-LRB-
cord-022053-idft1p6d	485	43	FFPE	FFPE	NNP
cord-022053-idft1p6d	485	44	)	)	-RRB-
cord-022053-idft1p6d	485	45	sections	section	NNS
cord-022053-idft1p6d	485	46	Design	design	NN
cord-022053-idft1p6d	485	47	and	and	CC
cord-022053-idft1p6d	485	48	evaluation	evaluation	NN
cord-022053-idft1p6d	485	49	of	of	IN
cord-022053-idft1p6d	485	50	peptide	peptide	JJ
cord-022053-idft1p6d	485	51	nucleic	nucleic	JJ
cord-022053-idft1p6d	485	52	acid	acid	NN
cord-022053-idft1p6d	485	53	probes	probe	NNS
cord-022053-idft1p6d	485	54	for	for	IN
cord-022053-idft1p6d	485	55	specific	specific	JJ
cord-022053-idft1p6d	485	56	identification	identification	NN
cord-022053-idft1p6d	485	57	of	of	IN
cord-022053-idft1p6d	485	58	Candida	Candida	NNP
cord-022053-idft1p6d	485	59	albicans	albican	NNS
cord-022053-idft1p6d	485	60	Identification	identification	NN
cord-022053-idft1p6d	485	61	of	of	IN
cord-022053-idft1p6d	485	62	Mycobacterium	Mycobacterium	NNP
cord-022053-idft1p6d	485	63	species	specie	NNS
cord-022053-idft1p6d	485	64	from	from	IN
cord-022053-idft1p6d	485	65	BACTEC	BACTEC	NNP
cord-022053-idft1p6d	485	66	MGIT	MGIT	NNP
cord-022053-idft1p6d	485	67	positive	positive	JJ
cord-022053-idft1p6d	485	68	cultures	culture	NNS
cord-022053-idft1p6d	485	69	with	with	IN
cord-022053-idft1p6d	485	70	Oligo	Oligo	NNP
cord-022053-idft1p6d	485	71	-	-	HYPH
cord-022053-idft1p6d	485	72	FISH	FISH	NNP
cord-022053-idft1p6d	485	73	and	and	CC
cord-022053-idft1p6d	485	74	PNA	PNA	NNP
cord-022053-idft1p6d	485	75	-	-	HYPH
cord-022053-idft1p6d	485	76	FISH	fish	NN
cord-022053-idft1p6d	485	77	methods	method	NNS
cord-022053-idft1p6d	485	78	Development	development	NN
cord-022053-idft1p6d	485	79	and	and	CC
cord-022053-idft1p6d	485	80	evaluation	evaluation	NN
cord-022053-idft1p6d	485	81	of	of	IN
cord-022053-idft1p6d	485	82	nucleic	nucleic	JJ
cord-022053-idft1p6d	485	83	acid	acid	NN
cord-022053-idft1p6d	485	84	-	-	HYPH
cord-022053-idft1p6d	485	85	based	base	VBN
cord-022053-idft1p6d	485	86	techniques	technique	NNS
cord-022053-idft1p6d	485	87	for	for	IN
cord-022053-idft1p6d	485	88	an	an	DT
cord-022053-idft1p6d	485	89	auxiliary	auxiliary	JJ
cord-022053-idft1p6d	485	90	diagnosis	diagnosis	NN
cord-022053-idft1p6d	485	91	of	of	IN
cord-022053-idft1p6d	485	92	invasive	invasive	JJ
cord-022053-idft1p6d	485	93	fungal	fungal	JJ
cord-022053-idft1p6d	485	94	infections	infection	NNS
cord-022053-idft1p6d	485	95	in	in	IN
cord-022053-idft1p6d	485	96	formalin	formalin	NN
cord-022053-idft1p6d	485	97	-	-	HYPH
cord-022053-idft1p6d	485	98	fixed	fix	VBN
cord-022053-idft1p6d	485	99	and	and	CC
cord-022053-idft1p6d	485	100	paraffin	paraffin	NN
cord-022053-idft1p6d	485	101	-	-	HYPH
cord-022053-idft1p6d	485	102	embedded	embed	VBN
cord-022053-idft1p6d	485	103	(	(	-LRB-
cord-022053-idft1p6d	485	104	FFPE	FFPE	NNP
cord-022053-idft1p6d	485	105	)	)	-RRB-
cord-022053-idft1p6d	485	106	tissues	tissue	VBZ
cord-022053-idft1p6d	485	107	Comparison	comparison	NN
cord-022053-idft1p6d	485	108	of	of	IN
cord-022053-idft1p6d	485	109	quantitative	quantitative	JJ
cord-022053-idft1p6d	485	110	real	real	JJ
cord-022053-idft1p6d	485	111	time	time	NN
cord-022053-idft1p6d	485	112	PCR	PCR	NNP
cord-022053-idft1p6d	485	113	with	with	IN
cord-022053-idft1p6d	485	114	sequencing	sequencing	NN
cord-022053-idft1p6d	485	115	and	and	CC
cord-022053-idft1p6d	485	116	ribosomal	ribosomal	JJ
cord-022053-idft1p6d	485	117	RNA	rna	NN
cord-022053-idft1p6d	485	118	-	-	HYPH
cord-022053-idft1p6d	485	119	FISH	FISH	NNP
cord-022053-idft1p6d	485	120	for	for	IN
cord-022053-idft1p6d	485	121	the	the	DT
cord-022053-idft1p6d	485	122	identification	identification	NN
cord-022053-idft1p6d	485	123	of	of	IN
cord-022053-idft1p6d	485	124	fungi	fungus	NNS
cord-022053-idft1p6d	485	125	in	in	IN
cord-022053-idft1p6d	485	126	formalin	formalin	NN
cord-022053-idft1p6d	485	127	fixed	fix	VBN
cord-022053-idft1p6d	485	128	,	,	,
cord-022053-idft1p6d	485	129	paraffin	paraffin	NN
cord-022053-idft1p6d	485	130	-	-	HYPH
cord-022053-idft1p6d	485	131	embedded	embed	VBN
cord-022053-idft1p6d	485	132	tissue	tissue	NN
cord-022053-idft1p6d	485	133	specimens	specimen	NNS
cord-022053-idft1p6d	485	134	Development	development	NN
cord-022053-idft1p6d	485	135	and	and	CC
cord-022053-idft1p6d	485	136	verification	verification	NN
cord-022053-idft1p6d	485	137	of	of	IN
cord-022053-idft1p6d	485	138	the	the	DT
cord-022053-idft1p6d	485	139	PAM50-based	PAM50-based	NNP
cord-022053-idft1p6d	485	140	Prosigna	Prosigna	NNP
cord-022053-idft1p6d	485	141	breast	breast	NN
cord-022053-idft1p6d	485	142	cancer	cancer	NN
cord-022053-idft1p6d	485	143	gene	gene	NN
cord-022053-idft1p6d	485	144	signature	signature	NN
cord-022053-idft1p6d	485	145	assay	assay	NN
cord-022053-idft1p6d	485	146	Evaluating	evaluate	VBG
cord-022053-idft1p6d	485	147	robustness	robustness	NN
cord-022053-idft1p6d	485	148	and	and	CC
cord-022053-idft1p6d	485	149	sensitivity	sensitivity	NN
cord-022053-idft1p6d	485	150	of	of	IN
cord-022053-idft1p6d	485	151	the	the	DT
cord-022053-idft1p6d	485	152	NanoString	NanoString	NNP
cord-022053-idft1p6d	485	153	Technologies	Technologies	NNPS
cord-022053-idft1p6d	485	154	nCounter	nCounter	NNP
cord-022053-idft1p6d	485	155	Platform	Platform	NNP
cord-022053-idft1p6d	485	156	to	to	TO
cord-022053-idft1p6d	485	157	enable	enable	VB
cord-022053-idft1p6d	485	158	multiplexed	multiplexed	JJ
cord-022053-idft1p6d	485	159	gene	gene	NN
cord-022053-idft1p6d	485	160	expression	expression	NN
cord-022053-idft1p6d	485	161	analysis	analysis	NN
cord-022053-idft1p6d	485	162	of	of	IN
cord-022053-idft1p6d	485	163	clinical	clinical	JJ
cord-022053-idft1p6d	485	164	samples	sample	NNS
cord-022053-idft1p6d	485	165	Matrix	Matrix	NNP
cord-022053-idft1p6d	485	166	-	-	HYPH
cord-022053-idft1p6d	485	167	assisted	assist	VBN
cord-022053-idft1p6d	485	168	laser	laser	NN
cord-022053-idft1p6d	485	169	desorption	desorption	NN
cord-022053-idft1p6d	485	170	/	/	SYM
cord-022053-idft1p6d	485	171	ionization	ionization	NN
cord-022053-idft1p6d	485	172	time	time	NN
cord-022053-idft1p6d	485	173	-	-	HYPH
cord-022053-idft1p6d	485	174	of	of	IN
cord-022053-idft1p6d	485	175	-	-	HYPH
cord-022053-idft1p6d	485	176	flight	flight	NN
cord-022053-idft1p6d	485	177	mass	mass	NN
cord-022053-idft1p6d	485	178	spectrometry	spectrometry	NN
cord-022053-idft1p6d	485	179	identification	identification	NN
cord-022053-idft1p6d	485	180	of	of	IN
cord-022053-idft1p6d	485	181	mycobacteria	mycobacterium	NNS
cord-022053-idft1p6d	485	182	in	in	IN
cord-022053-idft1p6d	485	183	routine	routine	JJ
cord-022053-idft1p6d	485	184	clinical	clinical	JJ
cord-022053-idft1p6d	485	185	practice	practice	NN
cord-022053-idft1p6d	485	186	Comparison	comparison	NN
cord-022053-idft1p6d	485	187	of	of	IN
cord-022053-idft1p6d	485	188	sample	sample	NN
cord-022053-idft1p6d	485	189	preparation	preparation	NN
cord-022053-idft1p6d	485	190	methods	method	NNS
cord-022053-idft1p6d	485	191	,	,	,
cord-022053-idft1p6d	485	192	instrumentation	instrumentation	NN
cord-022053-idft1p6d	485	193	platforms	platform	NNS
cord-022053-idft1p6d	485	194	,	,	,
cord-022053-idft1p6d	485	195	and	and	CC
cord-022053-idft1p6d	485	196	contemporary	contemporary	JJ
cord-022053-idft1p6d	485	197	commercial	commercial	JJ
cord-022053-idft1p6d	485	198	databases	database	NNS
cord-022053-idft1p6d	485	199	for	for	IN
cord-022053-idft1p6d	485	200	identification	identification	NN
cord-022053-idft1p6d	485	201	of	of	IN
cord-022053-idft1p6d	485	202	clinically	clinically	RB
cord-022053-idft1p6d	485	203	relevant	relevant	JJ
cord-022053-idft1p6d	485	204	mycobacteria	mycobacterium	NNS
cord-022053-idft1p6d	485	205	by	by	IN
cord-022053-idft1p6d	485	206	matrix	matrix	NN
cord-022053-idft1p6d	485	207	-	-	HYPH
cord-022053-idft1p6d	485	208	assisted	assist	VBN
cord-022053-idft1p6d	485	209	laser	laser	NN
cord-022053-idft1p6d	485	210	desorption	desorption	NN
cord-022053-idft1p6d	485	211	ionization	ionization	NN
cord-022053-idft1p6d	485	212	-	-	HYPH
cord-022053-idft1p6d	485	213	time	time	NN
cord-022053-idft1p6d	485	214	of	of	IN
cord-022053-idft1p6d	485	215	flight	flight	NN
cord-022053-idft1p6d	485	216	mass	mass	NN
cord-022053-idft1p6d	485	217	spectrometry	spectrometry	NN
cord-022053-idft1p6d	485	218	Identification	identification	NN
cord-022053-idft1p6d	485	219	of	of	IN
cord-022053-idft1p6d	485	220	mycobacteria	mycobacterium	NNS
cord-022053-idft1p6d	485	221	from	from	IN
cord-022053-idft1p6d	485	222	solid	solid	JJ
cord-022053-idft1p6d	485	223	and	and	CC
cord-022053-idft1p6d	485	224	liquid	liquid	JJ
cord-022053-idft1p6d	485	225	media	medium	NNS
cord-022053-idft1p6d	485	226	by	by	IN
cord-022053-idft1p6d	485	227	matrix	matrix	NN
cord-022053-idft1p6d	485	228	-	-	HYPH
cord-022053-idft1p6d	485	229	assisted	assist	VBN
cord-022053-idft1p6d	485	230	laser	laser	NN
cord-022053-idft1p6d	485	231	desorption	desorption	NN
cord-022053-idft1p6d	485	232	ionization	ionization	NN
cord-022053-idft1p6d	485	233	-	-	HYPH
cord-022053-idft1p6d	485	234	time	time	NN
cord-022053-idft1p6d	485	235	of	of	IN
cord-022053-idft1p6d	485	236	flight	flight	NN
cord-022053-idft1p6d	485	237	mass	mass	NN
cord-022053-idft1p6d	485	238	spectrometry	spectrometry	NN
cord-022053-idft1p6d	485	239	in	in	IN
cord-022053-idft1p6d	485	240	the	the	DT
cord-022053-idft1p6d	485	241	clinical	clinical	JJ
cord-022053-idft1p6d	485	242	laboratory	laboratory	NN
cord-022053-idft1p6d	486	1	Poster	poster	NN
cord-022053-idft1p6d	486	2	1190	1190	CD
cord-022053-idft1p6d	486	3	:	:	:
cord-022053-idft1p6d	487	1	Mycobacteria	Mycobacteria	NNP
cord-022053-idft1p6d	487	2	Identification	Identification	NNP
cord-022053-idft1p6d	487	3	by	by	IN
cord-022053-idft1p6d	487	4	MALDI	MALDI	NNP
cord-022053-idft1p6d	487	5	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	487	6	System	System	NNP
cord-022053-idft1p6d	487	7	:	:	:
cord-022053-idft1p6d	487	8	Evolution	evolution	NN
cord-022053-idft1p6d	487	9	of	of	IN
cord-022053-idft1p6d	487	10	Database	Database	NNP
cord-022053-idft1p6d	487	11	Content	Content	NNP
cord-022053-idft1p6d	487	12	and	and	CC
cord-022053-idft1p6d	487	13	Evaluation	Evaluation	NNP
cord-022053-idft1p6d	487	14	Criteria	Criteria	NNP
cord-022053-idft1p6d	487	15	Evaluation	Evaluation	NNP
cord-022053-idft1p6d	487	16	of	of	IN
cord-022053-idft1p6d	487	17	MALDI	MALDI	NNS
cord-022053-idft1p6d	488	1	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	488	2	Mycobacteria	Mycobacteria	NNP
cord-022053-idft1p6d	488	3	Library	Library	NNP
cord-022053-idft1p6d	488	4	v3.0	v3.0	NN
cord-022053-idft1p6d	488	5	for	for	IN
cord-022053-idft1p6d	488	6	identification	identification	NN
cord-022053-idft1p6d	488	7	of	of	IN
cord-022053-idft1p6d	488	8	nontuberculous	nontuberculous	JJ
cord-022053-idft1p6d	488	9	mycobacteria	mycobacterium	NNS
cord-022053-idft1p6d	488	10	Routine	routine	JJ
cord-022053-idft1p6d	488	11	identification	identification	NN
cord-022053-idft1p6d	488	12	of	of	IN
cord-022053-idft1p6d	488	13	medical	medical	JJ
cord-022053-idft1p6d	488	14	fungi	fungus	NNS
cord-022053-idft1p6d	488	15	by	by	IN
cord-022053-idft1p6d	488	16	the	the	DT
cord-022053-idft1p6d	488	17	new	new	JJ
cord-022053-idft1p6d	488	18	Vitek	Vitek	NNP
cord-022053-idft1p6d	488	19	MS	MS	NNP
cord-022053-idft1p6d	488	20	matrix	matrix	NN
cord-022053-idft1p6d	488	21	-	-	HYPH
cord-022053-idft1p6d	488	22	assisted	assist	VBN
cord-022053-idft1p6d	488	23	laser	laser	NN
cord-022053-idft1p6d	488	24	desorption	desorption	NN
cord-022053-idft1p6d	488	25	ionization	ionization	NN
cord-022053-idft1p6d	488	26	-	-	HYPH
cord-022053-idft1p6d	488	27	time	time	NN
cord-022053-idft1p6d	488	28	of	of	IN
cord-022053-idft1p6d	488	29	flight	flight	NN
cord-022053-idft1p6d	488	30	system	system	NN
cord-022053-idft1p6d	488	31	with	with	IN
cord-022053-idft1p6d	488	32	a	a	DT
cord-022053-idft1p6d	488	33	new	new	JJ
cord-022053-idft1p6d	488	34	time	time	NN
cord-022053-idft1p6d	488	35	-	-	HYPH
cord-022053-idft1p6d	488	36	effective	effective	JJ
cord-022053-idft1p6d	488	37	strategy	strategy	NN
cord-022053-idft1p6d	488	38	Discrimination	discrimination	NN
cord-022053-idft1p6d	488	39	of	of	IN
cord-022053-idft1p6d	488	40	Aspergillus	Aspergillus	NNP
cord-022053-idft1p6d	488	41	lentulus	lentulus	NN
cord-022053-idft1p6d	488	42	from	from	IN
cord-022053-idft1p6d	488	43	Aspergillus	aspergillus	NN
cord-022053-idft1p6d	488	44	fumigatus	fumigatus	NN
cord-022053-idft1p6d	488	45	by	by	IN
cord-022053-idft1p6d	488	46	Raman	Raman	NNP
cord-022053-idft1p6d	488	47	spectroscopy	spectroscopy	NN
cord-022053-idft1p6d	488	48	and	and	CC
cord-022053-idft1p6d	488	49	MALDI	MALDI	NNS
cord-022053-idft1p6d	488	50	-	-	HYPH
cord-022053-idft1p6d	488	51	TOF	TOF	NNP
cord-022053-idft1p6d	488	52	MS	MS	NNP
cord-022053-idft1p6d	488	53	Use	Use	NNP
cord-022053-idft1p6d	488	54	of	of	IN
cord-022053-idft1p6d	488	55	the	the	DT
cord-022053-idft1p6d	488	56	Bruker	Bruker	NNP
cord-022053-idft1p6d	488	57	MALDI	MALDI	NNP
cord-022053-idft1p6d	488	58	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	488	59	for	for	IN
cord-022053-idft1p6d	488	60	identification	identification	NN
cord-022053-idft1p6d	488	61	of	of	IN
cord-022053-idft1p6d	488	62	molds	mold	NNS
cord-022053-idft1p6d	488	63	in	in	IN
cord-022053-idft1p6d	488	64	the	the	DT
cord-022053-idft1p6d	488	65	clinical	clinical	JJ
cord-022053-idft1p6d	488	66	mycology	mycology	NN
cord-022053-idft1p6d	488	67	laboratory	laboratory	NNP
cord-022053-idft1p6d	488	68	Evaluation	Evaluation	NNP
cord-022053-idft1p6d	488	69	of	of	IN
cord-022053-idft1p6d	488	70	the	the	DT
cord-022053-idft1p6d	488	71	matrix	matrix	NN
cord-022053-idft1p6d	488	72	-	-	HYPH
cord-022053-idft1p6d	488	73	assisted	assist	VBN
cord-022053-idft1p6d	488	74	laser	laser	NN
cord-022053-idft1p6d	488	75	desorption	desorption	NN
cord-022053-idft1p6d	488	76	/	/	SYM
cord-022053-idft1p6d	488	77	ionization	ionization	NN
cord-022053-idft1p6d	488	78	time	time	NN
cord-022053-idft1p6d	488	79	-	-	HYPH
cord-022053-idft1p6d	488	80	of	of	IN
cord-022053-idft1p6d	488	81	-	-	HYPH
cord-022053-idft1p6d	488	82	flight	flight	NN
cord-022053-idft1p6d	488	83	mass	mass	NN
cord-022053-idft1p6d	488	84	spectrometry	spectrometry	NN
cord-022053-idft1p6d	488	85	Bruker	Bruker	NNP
cord-022053-idft1p6d	488	86	Biotyper	Biotyper	NNP
cord-022053-idft1p6d	488	87	for	for	IN
cord-022053-idft1p6d	488	88	identification	identification	NN
cord-022053-idft1p6d	488	89	of	of	IN
cord-022053-idft1p6d	488	90	Penicillium	Penicillium	NNP
cord-022053-idft1p6d	488	91	marneffei	marneffei	NNP
cord-022053-idft1p6d	488	92	,	,	,
cord-022053-idft1p6d	488	93	Paecilomyces	Paecilomyces	NNP
cord-022053-idft1p6d	488	94	species	specie	NNS
cord-022053-idft1p6d	488	95	,	,	,
cord-022053-idft1p6d	488	96	Fusarium	fusarium	NN
cord-022053-idft1p6d	488	97	solani	solani	NNS
cord-022053-idft1p6d	488	98	,	,	,
cord-022053-idft1p6d	488	99	Rhizopus	Rhizopus	NNP
cord-022053-idft1p6d	488	100	species	specie	NNS
cord-022053-idft1p6d	488	101	,	,	,
cord-022053-idft1p6d	488	102	and	and	CC
cord-022053-idft1p6d	488	103	Pseudallescheria	Pseudallescheria	NNP
cord-022053-idft1p6d	488	104	boydii	boydii	NNP
cord-022053-idft1p6d	488	105	Species	Species	NNP
cord-022053-idft1p6d	488	106	identification	identification	NN
cord-022053-idft1p6d	488	107	of	of	IN
cord-022053-idft1p6d	488	108	Aspergillus	aspergillus	NN
cord-022053-idft1p6d	488	109	,	,	,
cord-022053-idft1p6d	488	110	Fusarium	Fusarium	NNP
cord-022053-idft1p6d	488	111	and	and	CC
cord-022053-idft1p6d	488	112	Mucorales	Mucorales	NNP
cord-022053-idft1p6d	488	113	with	with	IN
cord-022053-idft1p6d	488	114	direct	direct	JJ
cord-022053-idft1p6d	488	115	surface	surface	NN
cord-022053-idft1p6d	488	116	analysis	analysis	NN
cord-022053-idft1p6d	488	117	by	by	IN
cord-022053-idft1p6d	488	118	matrix	matrix	NN
cord-022053-idft1p6d	488	119	-	-	HYPH
cord-022053-idft1p6d	488	120	assisted	assist	VBN
cord-022053-idft1p6d	488	121	laser	laser	NN
cord-022053-idft1p6d	488	122	desorption	desorption	NN
cord-022053-idft1p6d	488	123	ionization	ionization	NN
cord-022053-idft1p6d	488	124	time	time	NN
cord-022053-idft1p6d	488	125	-	-	HYPH
cord-022053-idft1p6d	488	126	of	of	IN
cord-022053-idft1p6d	488	127	-	-	HYPH
cord-022053-idft1p6d	488	128	flight	flight	NN
cord-022053-idft1p6d	488	129	mass	mass	NN
cord-022053-idft1p6d	488	130	spectrometry	spectrometry	NN
cord-022053-idft1p6d	488	131	Matrix	Matrix	NNP
cord-022053-idft1p6d	488	132	-	-	HYPH
cord-022053-idft1p6d	488	133	assisted	assist	VBN
cord-022053-idft1p6d	488	134	laser	laser	NN
cord-022053-idft1p6d	488	135	desorption	desorption	NN
cord-022053-idft1p6d	488	136	ionization	ionization	NN
cord-022053-idft1p6d	488	137	-	-	HYPH
cord-022053-idft1p6d	488	138	time	time	NN
cord-022053-idft1p6d	488	139	of	of	IN
cord-022053-idft1p6d	488	140	flight	flight	NN
cord-022053-idft1p6d	488	141	(	(	-LRB-
cord-022053-idft1p6d	488	142	MALDI	MALDI	NNP
cord-022053-idft1p6d	488	143	-	-	HYPH
cord-022053-idft1p6d	488	144	TOF	TOF	NNP
cord-022053-idft1p6d	488	145	)	)	-RRB-
cord-022053-idft1p6d	488	146	mass	mass	NN
cord-022053-idft1p6d	488	147	spectrometry	spectrometry	NN
cord-022053-idft1p6d	488	148	using	use	VBG
cord-022053-idft1p6d	488	149	the	the	DT
cord-022053-idft1p6d	488	150	Vitek	Vitek	NNP
cord-022053-idft1p6d	488	151	MS	MS	NNP
cord-022053-idft1p6d	488	152	system	system	NN
cord-022053-idft1p6d	488	153	for	for	IN
cord-022053-idft1p6d	488	154	rapid	rapid	JJ
cord-022053-idft1p6d	488	155	and	and	CC
cord-022053-idft1p6d	488	156	accurate	accurate	JJ
cord-022053-idft1p6d	488	157	identification	identification	NN
cord-022053-idft1p6d	488	158	of	of	IN
cord-022053-idft1p6d	488	159	dermatophytes	dermatophyte	NNS
cord-022053-idft1p6d	488	160	on	on	IN
cord-022053-idft1p6d	488	161	solid	solid	JJ
cord-022053-idft1p6d	488	162	cultures	culture	NNS
cord-022053-idft1p6d	489	1	Mould	Mould	NNP
cord-022053-idft1p6d	489	2	routine	routine	JJ
cord-022053-idft1p6d	489	3	identification	identification	NN
cord-022053-idft1p6d	489	4	in	in	IN
cord-022053-idft1p6d	489	5	the	the	DT
cord-022053-idft1p6d	489	6	clinical	clinical	JJ
cord-022053-idft1p6d	489	7	laboratory	laboratory	NN
cord-022053-idft1p6d	489	8	by	by	IN
cord-022053-idft1p6d	489	9	matrix	matrix	NN
cord-022053-idft1p6d	489	10	-	-	HYPH
cord-022053-idft1p6d	489	11	assisted	assist	VBN
cord-022053-idft1p6d	489	12	laser	laser	NN
cord-022053-idft1p6d	489	13	desorption	desorption	NN
cord-022053-idft1p6d	489	14	ionization	ionization	NN
cord-022053-idft1p6d	489	15	time	time	NN
cord-022053-idft1p6d	489	16	-	-	HYPH
cord-022053-idft1p6d	489	17	of	of	IN
cord-022053-idft1p6d	489	18	-	-	HYPH
cord-022053-idft1p6d	489	19	flight	flight	NN
cord-022053-idft1p6d	489	20	mass	mass	NN
cord-022053-idft1p6d	489	21	spectrometry	spectrometry	NN
cord-022053-idft1p6d	489	22	MALDI	MALDI	NNP
cord-022053-idft1p6d	489	23	-	-	HYPH
cord-022053-idft1p6d	489	24	TOF	TOF	NNP
cord-022053-idft1p6d	489	25	mass	mass	NN
cord-022053-idft1p6d	489	26	spectrometry	spectrometry	NN
cord-022053-idft1p6d	489	27	identification	identification	NN
cord-022053-idft1p6d	489	28	of	of	IN
cord-022053-idft1p6d	489	29	filamentous	filamentous	JJ
cord-022053-idft1p6d	489	30	fungi	fungus	NNS
cord-022053-idft1p6d	489	31	in	in	IN
cord-022053-idft1p6d	489	32	the	the	DT
cord-022053-idft1p6d	489	33	clinical	clinical	JJ
cord-022053-idft1p6d	489	34	laboratory	laboratory	NN
cord-022053-idft1p6d	489	35	Identification	identification	NN
cord-022053-idft1p6d	489	36	of	of	IN
cord-022053-idft1p6d	489	37	filamentous	filamentous	JJ
cord-022053-idft1p6d	489	38	fungi	fungi	NN
cord-022053-idft1p6d	489	39	isolates	isolate	NNS
cord-022053-idft1p6d	489	40	by	by	IN
cord-022053-idft1p6d	489	41	MALDI	MALDI	NNP
cord-022053-idft1p6d	489	42	-	-	HYPH
cord-022053-idft1p6d	489	43	TOF	TOF	NNP
cord-022053-idft1p6d	489	44	mass	mass	NN
cord-022053-idft1p6d	489	45	spectrometry	spectrometry	NN
cord-022053-idft1p6d	489	46	:	:	:
cord-022053-idft1p6d	489	47	clinical	clinical	JJ
cord-022053-idft1p6d	489	48	evaluation	evaluation	NN
cord-022053-idft1p6d	489	49	of	of	IN
cord-022053-idft1p6d	489	50	an	an	DT
cord-022053-idft1p6d	489	51	extended	extended	JJ
cord-022053-idft1p6d	489	52	reference	reference	NN
cord-022053-idft1p6d	489	53	spectra	spectra	NNP
cord-022053-idft1p6d	489	54	library	library	NN
cord-022053-idft1p6d	489	55	Assessment	Assessment	NNP
cord-022053-idft1p6d	489	56	of	of	IN
cord-022053-idft1p6d	489	57	various	various	JJ
cord-022053-idft1p6d	489	58	parameters	parameter	NNS
cord-022053-idft1p6d	489	59	to	to	TO
cord-022053-idft1p6d	489	60	improve	improve	VB
cord-022053-idft1p6d	489	61	MALDI	MALDI	NNP
cord-022053-idft1p6d	489	62	-	-	HYPH
cord-022053-idft1p6d	489	63	TOF	TOF	NNP
cord-022053-idft1p6d	489	64	MS	MS	NNP
cord-022053-idft1p6d	489	65	reference	reference	NN
cord-022053-idft1p6d	489	66	spectra	spectra	NNP
cord-022053-idft1p6d	489	67	libraries	library	NNS
cord-022053-idft1p6d	489	68	constructed	construct	VBN
cord-022053-idft1p6d	489	69	for	for	IN
cord-022053-idft1p6d	489	70	the	the	DT
cord-022053-idft1p6d	489	71	routine	routine	JJ
cord-022053-idft1p6d	489	72	identification	identification	NN
cord-022053-idft1p6d	489	73	of	of	IN
cord-022053-idft1p6d	489	74	filamentous	filamentous	JJ
cord-022053-idft1p6d	489	75	fungi	fungus	NNS
cord-022053-idft1p6d	489	76	Detection	detection	NN
cord-022053-idft1p6d	489	77	of	of	IN
cord-022053-idft1p6d	489	78	microorganisms	microorganism	NNS
cord-022053-idft1p6d	489	79	in	in	IN
cord-022053-idft1p6d	489	80	blood	blood	NN
cord-022053-idft1p6d	489	81	specimens	specimen	NNS
cord-022053-idft1p6d	489	82	using	use	VBG
cord-022053-idft1p6d	489	83	matrix	matrix	NN
cord-022053-idft1p6d	489	84	-	-	HYPH
cord-022053-idft1p6d	489	85	assisted	assist	VBN
cord-022053-idft1p6d	489	86	laser	laser	NN
cord-022053-idft1p6d	489	87	desorption	desorption	NN
cord-022053-idft1p6d	489	88	ionization	ionization	NN
cord-022053-idft1p6d	489	89	time	time	NN
cord-022053-idft1p6d	489	90	-	-	HYPH
cord-022053-idft1p6d	489	91	of	of	IN
cord-022053-idft1p6d	489	92	-	-	HYPH
cord-022053-idft1p6d	489	93	flight	flight	NN
cord-022053-idft1p6d	489	94	mass	mass	NN
cord-022053-idft1p6d	489	95	spectrometry	spectrometry	NN
cord-022053-idft1p6d	489	96	:	:	:
cord-022053-idft1p6d	489	97	a	a	DT
cord-022053-idft1p6d	489	98	review	review	NN
cord-022053-idft1p6d	489	99	Sepsis	sepsis	NN
cord-022053-idft1p6d	489	100	:	:	:
cord-022053-idft1p6d	489	101	a	a	DT
cord-022053-idft1p6d	489	102	roadmap	roadmap	NN
cord-022053-idft1p6d	489	103	for	for	IN
cord-022053-idft1p6d	489	104	future	future	JJ
cord-022053-idft1p6d	489	105	research	research	NN
cord-022053-idft1p6d	489	106	Direct	direct	JJ
cord-022053-idft1p6d	489	107	identification	identification	NN
cord-022053-idft1p6d	489	108	of	of	IN
cord-022053-idft1p6d	489	109	urinary	urinary	JJ
cord-022053-idft1p6d	489	110	tract	tract	NN
cord-022053-idft1p6d	489	111	pathogens	pathogen	NNS
cord-022053-idft1p6d	489	112	from	from	IN
cord-022053-idft1p6d	489	113	urine	urine	NN
cord-022053-idft1p6d	489	114	samples	sample	NNS
cord-022053-idft1p6d	489	115	,	,	,
cord-022053-idft1p6d	489	116	combining	combine	VBG
cord-022053-idft1p6d	489	117	urine	urine	NN
cord-022053-idft1p6d	489	118	of	of	IN
cord-022053-idft1p6d	489	119	human	human	JJ
cord-022053-idft1p6d	489	120	papillomaviruses	papillomaviruse	NNS
cord-022053-idft1p6d	489	121	(	(	-LRB-
cord-022053-idft1p6d	489	122	HPV	HPV	NNP
cord-022053-idft1p6d	489	123	)	)	-RRB-
cord-022053-idft1p6d	489	124	in	in	IN
cord-022053-idft1p6d	489	125	oropharyngeal	oropharyngeal	JJ
cord-022053-idft1p6d	489	126	squamous	squamous	JJ
cord-022053-idft1p6d	489	127	cell	cell	NN
cord-022053-idft1p6d	489	128	carcinoma	carcinoma	NN
cord-022053-idft1p6d	489	129	(	(	-LRB-
cord-022053-idft1p6d	489	130	OPSCC	OPSCC	NNP
cord-022053-idft1p6d	489	131	)	)	-RRB-
cord-022053-idft1p6d	490	1	Isothermal	isothermal	JJ
cord-022053-idft1p6d	490	2	multiple	multiple	JJ
cord-022053-idft1p6d	490	3	displacement	displacement	NN
cord-022053-idft1p6d	490	4	amplification	amplification	NN
cord-022053-idft1p6d	490	5	:	:	:
cord-022053-idft1p6d	490	6	a	a	DT
cord-022053-idft1p6d	490	7	methodical	methodical	JJ
cord-022053-idft1p6d	490	8	approach	approach	NN
cord-022053-idft1p6d	490	9	enhancing	enhance	VBG
cord-022053-idft1p6d	490	10	molecular	molecular	JJ
cord-022053-idft1p6d	490	11	routine	routine	JJ
cord-022053-idft1p6d	490	12	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	490	13	of	of	IN
cord-022053-idft1p6d	490	14	microcarcinomas	microcarcinomas	NN
cord-022053-idft1p6d	490	15	and	and	CC
cord-022053-idft1p6d	490	16	small	small	JJ
cord-022053-idft1p6d	490	17	biopsies	biopsy	NNS
cord-022053-idft1p6d	490	18	Point	point	NN
cord-022053-idft1p6d	490	19	-	-	HYPH
cord-022053-idft1p6d	490	20	counterpoint	counterpoint	NN
cord-022053-idft1p6d	490	21	:	:	:
cord-022053-idft1p6d	490	22	large	large	JJ
cord-022053-idft1p6d	490	23	multiplex	multiplex	NN
cord-022053-idft1p6d	490	24	PCR	pcr	NN
cord-022053-idft1p6d	490	25	panels	panel	NNS
cord-022053-idft1p6d	490	26	should	should	MD
cord-022053-idft1p6d	490	27	be	be	VB
cord-022053-idft1p6d	490	28	first	first	JJ
cord-022053-idft1p6d	490	29	-	-	HYPH
cord-022053-idft1p6d	490	30	line	line	NN
cord-022053-idft1p6d	490	31	tests	test	NNS
cord-022053-idft1p6d	490	32	for	for	IN
cord-022053-idft1p6d	490	33	detection	detection	NN
cord-022053-idft1p6d	490	34	of	of	IN
cord-022053-idft1p6d	490	35	respiratory	respiratory	JJ
cord-022053-idft1p6d	490	36	and	and	CC
cord-022053-idft1p6d	490	37	intestinal	intestinal	JJ
cord-022053-idft1p6d	490	38	pathogens	pathogen	NNS
cord-022053-idft1p6d	490	39	Emerging	emerge	VBG
cord-022053-idft1p6d	490	40	technologies	technology	NNS
cord-022053-idft1p6d	490	41	for	for	IN
cord-022053-idft1p6d	490	42	the	the	DT
cord-022053-idft1p6d	490	43	clinical	clinical	JJ
cord-022053-idft1p6d	490	44	microbiology	microbiology	NN
cord-022053-idft1p6d	490	45	laboratory	laboratory	NN
cord-022053-idft1p6d	491	1	Basic	basic	JJ
cord-022053-idft1p6d	491	2	concepts	concept	NNS
cord-022053-idft1p6d	491	3	of	of	IN
cord-022053-idft1p6d	491	4	microarrays	microarray	NNS
cord-022053-idft1p6d	491	5	and	and	CC
cord-022053-idft1p6d	491	6	potential	potential	JJ
cord-022053-idft1p6d	491	7	applications	application	NNS
cord-022053-idft1p6d	491	8	in	in	IN
cord-022053-idft1p6d	491	9	clinical	clinical	JJ
cord-022053-idft1p6d	491	10	microbiology	microbiology	NN
cord-022053-idft1p6d	491	11	Molecular	molecular	JJ
cord-022053-idft1p6d	491	12	diagnosis	diagnosis	NN
cord-022053-idft1p6d	491	13	of	of	IN
cord-022053-idft1p6d	491	14	respiratory	respiratory	JJ
cord-022053-idft1p6d	491	15	viruses	virus	NNS
cord-022053-idft1p6d	492	1	Molecular	molecular	JJ
cord-022053-idft1p6d	492	2	Pathology	Pathology	NNP
cord-022053-idft1p6d	492	3	in	in	IN
cord-022053-idft1p6d	492	4	Clinical	Clinical	NNP
cord-022053-idft1p6d	492	5	Practice	Practice	NNP
cord-022053-idft1p6d	492	6	Community	Community	NNP
cord-022053-idft1p6d	492	7	-	-	HYPH
cord-022053-idft1p6d	492	8	acquired	acquire	VBN
cord-022053-idft1p6d	492	9	pneumonia	pneumonia	NN
cord-022053-idft1p6d	492	10	requiring	require	VBG
cord-022053-idft1p6d	492	11	hospitalization	hospitalization	NN
cord-022053-idft1p6d	492	12	among	among	IN
cord-022053-idft1p6d	493	1	U.S.	U.S.	NNP
cord-022053-idft1p6d	493	2	adults	adult	NNS
cord-022053-idft1p6d	493	3	Pertussis	pertussis	NN
cord-022053-idft1p6d	493	4	:	:	:
cord-022053-idft1p6d	493	5	microbiology	microbiology	NN
cord-022053-idft1p6d	493	6	,	,	,
cord-022053-idft1p6d	493	7	disease	disease	NN
cord-022053-idft1p6d	493	8	,	,	,
cord-022053-idft1p6d	493	9	treatment	treatment	NN
cord-022053-idft1p6d	493	10	,	,	,
cord-022053-idft1p6d	493	11	and	and	CC
cord-022053-idft1p6d	493	12	prevention	prevention	NN
cord-022053-idft1p6d	493	13	Laboratory	laboratory	NN
cord-022053-idft1p6d	493	14	diagnosis	diagnosis	NN
cord-022053-idft1p6d	493	15	of	of	IN
cord-022053-idft1p6d	493	16	bacterial	bacterial	JJ
cord-022053-idft1p6d	493	17	gastroenteritis	gastroenteritis	NN
cord-022053-idft1p6d	493	18	Molecular	molecular	JJ
cord-022053-idft1p6d	493	19	testing	testing	NN
cord-022053-idft1p6d	493	20	for	for	IN
cord-022053-idft1p6d	493	21	viral	viral	JJ
cord-022053-idft1p6d	493	22	and	and	CC
cord-022053-idft1p6d	493	23	bacterial	bacterial	JJ
cord-022053-idft1p6d	493	24	enteric	enteric	JJ
cord-022053-idft1p6d	493	25	pathogens	pathogen	NNS
cord-022053-idft1p6d	493	26	:	:	:
cord-022053-idft1p6d	493	27	gold	gold	NN
cord-022053-idft1p6d	493	28	standard	standard	NN
cord-022053-idft1p6d	493	29	for	for	IN
cord-022053-idft1p6d	493	30	viruses	virus	NNS
cord-022053-idft1p6d	493	31	,	,	,
cord-022053-idft1p6d	493	32	but	but	CC
cord-022053-idft1p6d	493	33	do	do	VB
cord-022053-idft1p6d	493	34	n't	not	RB
cord-022053-idft1p6d	493	35	let	let	VB
cord-022053-idft1p6d	493	36	culture	culture	NN
cord-022053-idft1p6d	493	37	go	go	VB
cord-022053-idft1p6d	493	38	just	just	RB
cord-022053-idft1p6d	493	39	yet	yet	RB
cord-022053-idft1p6d	493	40	?	?	.
cord-022053-idft1p6d	494	1	Multiplex	multiplex	NN
cord-022053-idft1p6d	494	2	polymerase	polymerase	NN
cord-022053-idft1p6d	494	3	chain	chain	NN
cord-022053-idft1p6d	494	4	reaction	reaction	NN
cord-022053-idft1p6d	494	5	tests	test	NNS
cord-022053-idft1p6d	494	6	for	for	IN
cord-022053-idft1p6d	494	7	detection	detection	NN
cord-022053-idft1p6d	494	8	of	of	IN
cord-022053-idft1p6d	494	9	pathogens	pathogen	NNS
cord-022053-idft1p6d	494	10	associated	associate	VBN
cord-022053-idft1p6d	494	11	with	with	IN
cord-022053-idft1p6d	494	12	gastroenteritis	gastroenteritis	JJ
cord-022053-idft1p6d	494	13	Advances	advance	NNS
cord-022053-idft1p6d	494	14	in	in	IN
cord-022053-idft1p6d	494	15	molecular	molecular	JJ
cord-022053-idft1p6d	494	16	diagnosis	diagnosis	NN
cord-022053-idft1p6d	494	17	of	of	IN
cord-022053-idft1p6d	494	18	parasitic	parasitic	JJ
cord-022053-idft1p6d	494	19	enteropathogens	enteropathogen	NNS
cord-022053-idft1p6d	494	20	Multiplex	Multiplex	NNP
cord-022053-idft1p6d	494	21	PCR	PCR	NNP
cord-022053-idft1p6d	494	22	testing	testing	NN
cord-022053-idft1p6d	494	23	for	for	IN
cord-022053-idft1p6d	494	24	nine	nine	CD
cord-022053-idft1p6d	494	25	different	different	JJ
cord-022053-idft1p6d	494	26	sexually	sexually	RB
cord-022053-idft1p6d	494	27	transmitted	transmit	VBN
cord-022053-idft1p6d	494	28	infections	infection	NNS
cord-022053-idft1p6d	495	1	Nosocomial	nosocomial	JJ
cord-022053-idft1p6d	495	2	bacterial	bacterial	JJ
cord-022053-idft1p6d	495	3	meningitis	meningitis	NN
cord-022053-idft1p6d	495	4	State	state	NN
cord-022053-idft1p6d	495	5	-	-	HYPH
cord-022053-idft1p6d	495	6	of	of	IN
cord-022053-idft1p6d	495	7	-	-	HYPH
cord-022053-idft1p6d	495	8	the	the	DT
cord-022053-idft1p6d	495	9	-	-	HYPH
cord-022053-idft1p6d	495	10	art	art	NN
cord-022053-idft1p6d	495	11	microbiologic	microbiologic	JJ
cord-022053-idft1p6d	495	12	testing	testing	NN
cord-022053-idft1p6d	495	13	for	for	IN
cord-022053-idft1p6d	495	14	community	community	NN
cord-022053-idft1p6d	495	15	-	-	HYPH
cord-022053-idft1p6d	495	16	acquired	acquire	VBN
cord-022053-idft1p6d	495	17	meningitis	meningitis	NN
cord-022053-idft1p6d	495	18	and	and	CC
cord-022053-idft1p6d	495	19	encephalitis	encephalitis	NN
cord-022053-idft1p6d	495	20	Epidemiology	epidemiology	NN
cord-022053-idft1p6d	495	21	,	,	,
cord-022053-idft1p6d	495	22	diagnosis	diagnosis	NN
cord-022053-idft1p6d	495	23	,	,	,
cord-022053-idft1p6d	495	24	and	and	CC
cord-022053-idft1p6d	495	25	antimicrobial	antimicrobial	JJ
cord-022053-idft1p6d	495	26	treatment	treatment	NN
cord-022053-idft1p6d	495	27	of	of	IN
cord-022053-idft1p6d	495	28	acute	acute	JJ
cord-022053-idft1p6d	495	29	bacterial	bacterial	JJ
cord-022053-idft1p6d	495	30	meningitis	meningitis	NN
cord-022053-idft1p6d	495	31	Diagnostic	diagnostic	JJ
cord-022053-idft1p6d	495	32	performance	performance	NN
cord-022053-idft1p6d	495	33	of	of	IN
cord-022053-idft1p6d	495	34	a	a	DT
cord-022053-idft1p6d	495	35	multiplex	multiplex	JJ
cord-022053-idft1p6d	495	36	PCR	pcr	NN
cord-022053-idft1p6d	495	37	assay	assay	NN
cord-022053-idft1p6d	495	38	for	for	IN
cord-022053-idft1p6d	495	39	meningitis	meningitis	NN
cord-022053-idft1p6d	495	40	in	in	IN
cord-022053-idft1p6d	495	41	an	an	DT
cord-022053-idft1p6d	495	42	HIV	HIV	NNP
cord-022053-idft1p6d	495	43	-	-	HYPH
cord-022053-idft1p6d	495	44	infected	infect	VBN
cord-022053-idft1p6d	495	45	population	population	NN
cord-022053-idft1p6d	495	46	in	in	IN
cord-022053-idft1p6d	495	47	Uganda	Uganda	NNP
cord-022053-idft1p6d	495	48	Two	two	CD
cord-022053-idft1p6d	495	49	decades	decade	NNS
cord-022053-idft1p6d	495	50	of	of	IN
cord-022053-idft1p6d	495	51	mortality	mortality	NN
cord-022053-idft1p6d	495	52	trends	trend	NNS
cord-022053-idft1p6d	495	53	among	among	IN
cord-022053-idft1p6d	495	54	patients	patient	NNS
cord-022053-idft1p6d	495	55	with	with	IN
cord-022053-idft1p6d	495	56	severe	severe	JJ
cord-022053-idft1p6d	495	57	sepsis	sepsis	NN
cord-022053-idft1p6d	495	58	:	:	:
cord-022053-idft1p6d	495	59	a	a	DT
cord-022053-idft1p6d	495	60	comparative	comparative	JJ
cord-022053-idft1p6d	495	61	meta	meta	NN
cord-022053-idft1p6d	495	62	-	-	HYPH
cord-022053-idft1p6d	495	63	analysis	analysis	NN
cord-022053-idft1p6d	496	1	The	the	DT
cord-022053-idft1p6d	496	2	clinical	clinical	JJ
cord-022053-idft1p6d	496	3	and	and	CC
cord-022053-idft1p6d	496	4	prognostic	prognostic	JJ
cord-022053-idft1p6d	496	5	importance	importance	NN
cord-022053-idft1p6d	496	6	of	of	IN
cord-022053-idft1p6d	496	7	positive	positive	JJ
cord-022053-idft1p6d	496	8	blood	blood	NN
cord-022053-idft1p6d	496	9	cultures	culture	NNS
cord-022053-idft1p6d	496	10	in	in	IN
cord-022053-idft1p6d	496	11	adults	adult	NNS
cord-022053-idft1p6d	496	12	Laboratory	Laboratory	NNP
cord-022053-idft1p6d	496	13	detection	detection	NN
cord-022053-idft1p6d	496	14	of	of	IN
cord-022053-idft1p6d	496	15	bacteremia	bacteremia	NN
cord-022053-idft1p6d	496	16	and	and	CC
cord-022053-idft1p6d	496	17	fungemia	fungemia	NN
cord-022053-idft1p6d	497	1	Predicting	predict	VBG
cord-022053-idft1p6d	497	2	bacteremia	bacteremia	NN
cord-022053-idft1p6d	497	3	in	in	IN
cord-022053-idft1p6d	497	4	patients	patient	NNS
cord-022053-idft1p6d	497	5	with	with	IN
cord-022053-idft1p6d	497	6	sepsis	sepsis	NN
cord-022053-idft1p6d	497	7	syndrome	syndrome	NN
cord-022053-idft1p6d	497	8	.	.	.
cord-022053-idft1p6d	498	1	Academic	Academic	NNP
cord-022053-idft1p6d	498	2	Medical	Medical	NNP
cord-022053-idft1p6d	498	3	Center	Center	NNP
cord-022053-idft1p6d	498	4	Consortium	Consortium	NNP
cord-022053-idft1p6d	498	5	Sepsis	Sepsis	NNP
cord-022053-idft1p6d	498	6	Project	Project	NNP
cord-022053-idft1p6d	499	1	Working	Working	NNP
cord-022053-idft1p6d	499	2	Group	Group	NNP
cord-022053-idft1p6d	499	3	Quantitative	Quantitative	NNP
cord-022053-idft1p6d	499	4	aspects	aspect	NNS
cord-022053-idft1p6d	499	5	of	of	IN
cord-022053-idft1p6d	499	6	septicemia	septicemia	NN
cord-022053-idft1p6d	500	1	A	a	DT
cord-022053-idft1p6d	500	2	cross	cross	JJ
cord-022053-idft1p6d	500	3	comparison	comparison	NN
cord-022053-idft1p6d	500	4	of	of	IN
cord-022053-idft1p6d	500	5	technologies	technology	NNS
cord-022053-idft1p6d	500	6	for	for	IN
cord-022053-idft1p6d	500	7	the	the	DT
cord-022053-idft1p6d	500	8	detection	detection	NN
cord-022053-idft1p6d	500	9	of	of	IN
cord-022053-idft1p6d	500	10	microRNAs	microRNAs	NNPS
cord-022053-idft1p6d	500	11	in	in	IN
cord-022053-idft1p6d	500	12	clinical	clinical	JJ
cord-022053-idft1p6d	500	13	FFPE	ffpe	NN
cord-022053-idft1p6d	500	14	samples	sample	NNS
cord-022053-idft1p6d	500	15	of	of	IN
cord-022053-idft1p6d	500	16	hepatoblastoma	hepatoblastoma	NNS
cord-022053-idft1p6d	500	17	patients	patient	NNS
cord-022053-idft1p6d	500	18	Plasmodium	Plasmodium	NNP
cord-022053-idft1p6d	500	19	falciparum	falciparum	NN
cord-022053-idft1p6d	500	20	gene	gene	NN
cord-022053-idft1p6d	500	21	expression	expression	NN
cord-022053-idft1p6d	500	22	measured	measure	VBN
cord-022053-idft1p6d	500	23	directly	directly	RB
cord-022053-idft1p6d	500	24	from	from	IN
cord-022053-idft1p6d	500	25	tissue	tissue	NN
cord-022053-idft1p6d	500	26	during	during	IN
cord-022053-idft1p6d	500	27	human	human	JJ
cord-022053-idft1p6d	500	28	infection	infection	NN
cord-022053-idft1p6d	501	1	Molecular	molecular	JJ
cord-022053-idft1p6d	501	2	microbiology	microbiology	NN
cord-022053-idft1p6d	501	3	Comparison	comparison	NN
cord-022053-idft1p6d	501	4	of	of	IN
cord-022053-idft1p6d	501	5	the	the	DT
cord-022053-idft1p6d	501	6	next	next	JJ
cord-022053-idft1p6d	501	7	-	-	HYPH
cord-022053-idft1p6d	501	8	generation	generation	NN
cord-022053-idft1p6d	501	9	Xpert	Xpert	NNP
cord-022053-idft1p6d	501	10	MRSA	MRSA	NNP
cord-022053-idft1p6d	501	11	/	/	SYM
cord-022053-idft1p6d	501	12	SA	SA	NNP
cord-022053-idft1p6d	501	13	BC	BC	NNP
cord-022053-idft1p6d	501	14	assay	assay	NN
cord-022053-idft1p6d	501	15	and	and	CC
cord-022053-idft1p6d	501	16	the	the	DT
cord-022053-idft1p6d	501	17	GeneOhm	GeneOhm	NNP
cord-022053-idft1p6d	501	18	StaphSR	StaphSR	NNP
cord-022053-idft1p6d	501	19	assay	assay	NN
cord-022053-idft1p6d	501	20	to	to	IN
cord-022053-idft1p6d	501	21	routine	routine	JJ
cord-022053-idft1p6d	501	22	culture	culture	NN
cord-022053-idft1p6d	501	23	for	for	IN
cord-022053-idft1p6d	501	24	identification	identification	NN
cord-022053-idft1p6d	501	25	of	of	IN
cord-022053-idft1p6d	501	26	Staphylococcus	Staphylococcus	NNP
cord-022053-idft1p6d	501	27	aureus	aureus	NN
cord-022053-idft1p6d	501	28	and	and	CC
cord-022053-idft1p6d	501	29	methicillin	methicillin	NN
cord-022053-idft1p6d	501	30	-	-	HYPH
cord-022053-idft1p6d	501	31	resistant	resistant	JJ
cord-022053-idft1p6d	501	32	S.	S.	NNP
cord-022053-idft1p6d	501	33	aureus	aureus	NN
cord-022053-idft1p6d	501	34	in	in	IN
cord-022053-idft1p6d	501	35	positive	positive	JJ
cord-022053-idft1p6d	501	36	-	-	HYPH
cord-022053-idft1p6d	501	37	blood	blood	NN
cord-022053-idft1p6d	501	38	-	-	HYPH
cord-022053-idft1p6d	501	39	culture	culture	NN
cord-022053-idft1p6d	501	40	broths	broth	NNS
cord-022053-idft1p6d	502	1	Multicenter	multicenter	JJ
cord-022053-idft1p6d	502	2	evaluation	evaluation	NN
cord-022053-idft1p6d	502	3	of	of	IN
cord-022053-idft1p6d	502	4	the	the	DT
cord-022053-idft1p6d	502	5	Xpert	Xpert	NNP
cord-022053-idft1p6d	502	6	Norovirus	Norovirus	NNP
cord-022053-idft1p6d	502	7	assay	assay	NN
cord-022053-idft1p6d	502	8	for	for	IN
cord-022053-idft1p6d	502	9	detection	detection	NN
cord-022053-idft1p6d	502	10	of	of	IN
cord-022053-idft1p6d	502	11	Norovirus	Norovirus	NNP
cord-022053-idft1p6d	502	12	genogroups	genogroup	NNS
cord-022053-idft1p6d	502	13	I	-PRON-	PRP
cord-022053-idft1p6d	502	14	and	and	CC
cord-022053-idft1p6d	502	15	II	II	NNP
cord-022053-idft1p6d	502	16	in	in	IN
cord-022053-idft1p6d	502	17	fecal	fecal	JJ
cord-022053-idft1p6d	502	18	specimens	specimen	NNS
cord-022053-idft1p6d	503	1	Multicenter	multicenter	JJ
cord-022053-idft1p6d	503	2	evaluation	evaluation	NN
cord-022053-idft1p6d	503	3	of	of	IN
cord-022053-idft1p6d	503	4	the	the	DT
cord-022053-idft1p6d	503	5	Cepheid	Cepheid	NNP
cord-022053-idft1p6d	503	6	Xpert	Xpert	NNP
cord-022053-idft1p6d	503	7	methicillin	methicillin	NN
cord-022053-idft1p6d	503	8	-	-	HYPH
cord-022053-idft1p6d	503	9	resistant	resistant	JJ
cord-022053-idft1p6d	503	10	Staphylococcus	Staphylococcus	NNP
cord-022053-idft1p6d	503	11	aureus	aureus	NN
cord-022053-idft1p6d	503	12	(	(	-LRB-
cord-022053-idft1p6d	503	13	MRSA	MRSA	NNP
cord-022053-idft1p6d	503	14	)	)	-RRB-
cord-022053-idft1p6d	503	15	test	test	NN
cord-022053-idft1p6d	503	16	as	as	IN
cord-022053-idft1p6d	503	17	a	a	DT
cord-022053-idft1p6d	503	18	rapid	rapid	JJ
cord-022053-idft1p6d	503	19	screening	screening	NN
cord-022053-idft1p6d	503	20	method	method	NN
cord-022053-idft1p6d	503	21	for	for	IN
cord-022053-idft1p6d	503	22	detection	detection	NN
cord-022053-idft1p6d	503	23	of	of	IN
cord-022053-idft1p6d	503	24	MRSA	MRSA	NNP
cord-022053-idft1p6d	503	25	in	in	IN
cord-022053-idft1p6d	503	26	nares	nares	JJ
cord-022053-idft1p6d	503	27	Charnot	Charnot	NNP
cord-022053-idft1p6d	503	28	-	-	HYPH
cord-022053-idft1p6d	503	29	Katsikas	Katsikas	NNP
cord-022053-idft1p6d	503	30	A.	a.	NN
cord-022053-idft1p6d	503	31	Comparison	comparison	NN
cord-022053-idft1p6d	503	32	of	of	IN
cord-022053-idft1p6d	503	33	Cepheid	Cepheid	NNP
cord-022053-idft1p6d	503	34	Xpert(R	Xpert(R	NNP
cord-022053-idft1p6d	503	35	)	)	-RRB-
cord-022053-idft1p6d	504	1	Flu/	flu/	VB
cord-022053-idft1p6d	505	1	RSV	RSV	NNP
cord-022053-idft1p6d	505	2	XC	XC	NNP
cord-022053-idft1p6d	505	3	and	and	CC
cord-022053-idft1p6d	505	4	BioFire	BioFire	NNP
cord-022053-idft1p6d	505	5	FilmArray(R	filmarray(r	ADD
cord-022053-idft1p6d	505	6	)	)	-RRB-
cord-022053-idft1p6d	506	1	for	for	IN
cord-022053-idft1p6d	506	2	detection	detection	NN
cord-022053-idft1p6d	506	3	of	of	IN
cord-022053-idft1p6d	506	4	influenza	influenza	NN
cord-022053-idft1p6d	506	5	A	a	NN
cord-022053-idft1p6d	506	6	,	,	,
cord-022053-idft1p6d	506	7	influenza	influenza	NN
cord-022053-idft1p6d	506	8	B	b	NN
cord-022053-idft1p6d	506	9	,	,	,
cord-022053-idft1p6d	506	10	and	and	CC
cord-022053-idft1p6d	506	11	respiratory	respiratory	JJ
cord-022053-idft1p6d	506	12	syncytial	syncytial	JJ
cord-022053-idft1p6d	506	13	virus	virus	NN
cord-022053-idft1p6d	506	14	T2	t2	NN
cord-022053-idft1p6d	506	15	magnetic	magnetic	JJ
cord-022053-idft1p6d	506	16	resonance	resonance	NN
cord-022053-idft1p6d	506	17	enables	enable	VBZ
cord-022053-idft1p6d	506	18	nanoparticle	nanoparticle	NN
cord-022053-idft1p6d	506	19	-	-	HYPH
cord-022053-idft1p6d	506	20	mediated	mediate	VBN
cord-022053-idft1p6d	506	21	rapid	rapid	JJ
cord-022053-idft1p6d	506	22	detection	detection	NN
cord-022053-idft1p6d	506	23	of	of	IN
cord-022053-idft1p6d	506	24	candidemia	candidemia	NN
cord-022053-idft1p6d	506	25	in	in	IN
cord-022053-idft1p6d	506	26	whole	whole	JJ
cord-022053-idft1p6d	506	27	blood	blood	NN
cord-022053-idft1p6d	506	28	T2	T2	NNP
cord-022053-idft1p6d	506	29	magnetic	magnetic	JJ
cord-022053-idft1p6d	506	30	resonance	resonance	NN
cord-022053-idft1p6d	506	31	assay	assay	NN
cord-022053-idft1p6d	506	32	for	for	IN
cord-022053-idft1p6d	506	33	the	the	DT
cord-022053-idft1p6d	506	34	rapid	rapid	JJ
cord-022053-idft1p6d	506	35	diagnosis	diagnosis	NN
cord-022053-idft1p6d	506	36	of	of	IN
cord-022053-idft1p6d	506	37	candidemia	candidemia	NN
cord-022053-idft1p6d	506	38	in	in	IN
cord-022053-idft1p6d	506	39	whole	whole	JJ
cord-022053-idft1p6d	506	40	blood	blood	NN
cord-022053-idft1p6d	506	41	:	:	:
cord-022053-idft1p6d	506	42	a	a	DT
cord-022053-idft1p6d	506	43	clinical	clinical	JJ
cord-022053-idft1p6d	506	44	trial	trial	NN
cord-022053-idft1p6d	506	45	T2Bacteria	T2Bacteria	NNS
cord-022053-idft1p6d	506	46	:	:	:
cord-022053-idft1p6d	506	47	rapid	rapid	JJ
cord-022053-idft1p6d	506	48	and	and	CC
cord-022053-idft1p6d	506	49	sensitive	sensitive	JJ
cord-022053-idft1p6d	506	50	detection	detection	NN
cord-022053-idft1p6d	506	51	and	and	CC
cord-022053-idft1p6d	506	52	identification	identification	NN
cord-022053-idft1p6d	506	53	of	of	IN
cord-022053-idft1p6d	506	54	sepsis	sepsis	NN
cord-022053-idft1p6d	506	55	pathogens	pathogen	NNS
cord-022053-idft1p6d	506	56	in	in	IN
cord-022053-idft1p6d	506	57	whole	whole	JJ
cord-022053-idft1p6d	506	58	blood	blood	NN
cord-022053-idft1p6d	506	59	specimens	specimen	NNS
cord-022053-idft1p6d	506	60	by	by	IN
cord-022053-idft1p6d	506	61	T2MR	t2mr	NN
cord-022053-idft1p6d	507	1	(	(	-LRB-
cord-022053-idft1p6d	507	2	poster	poster	NN
cord-022053-idft1p6d	507	3	)	)	-RRB-
cord-022053-idft1p6d	507	4	Evaluation	Evaluation	NNP
cord-022053-idft1p6d	507	5	of	of	IN
cord-022053-idft1p6d	507	6	two	two	CD
cord-022053-idft1p6d	507	7	commercial	commercial	JJ
cord-022053-idft1p6d	507	8	loop	loop	NN
cord-022053-idft1p6d	507	9	-	-	HYPH
cord-022053-idft1p6d	507	10	mediated	mediate	VBN
cord-022053-idft1p6d	507	11	isothermal	isothermal	JJ
cord-022053-idft1p6d	507	12	amplification	amplification	NN
cord-022053-idft1p6d	507	13	assays	assay	NNS
cord-022053-idft1p6d	507	14	for	for	IN
cord-022053-idft1p6d	507	15	detection	detection	NN
cord-022053-idft1p6d	507	16	of	of	IN
cord-022053-idft1p6d	507	17	avian	avian	JJ
cord-022053-idft1p6d	507	18	influenza	influenza	NN
cord-022053-idft1p6d	507	19	H5	H5	NNP
cord-022053-idft1p6d	507	20	and	and	CC
cord-022053-idft1p6d	507	21	H7	H7	NNP
cord-022053-idft1p6d	507	22	hemagglutinin	hemagglutinin	NN
cord-022053-idft1p6d	507	23	genes	gene	NNS
cord-022053-idft1p6d	508	1	A	a	DT
cord-022053-idft1p6d	508	2	comparison	comparison	NN
cord-022053-idft1p6d	508	3	of	of	IN
cord-022053-idft1p6d	508	4	in	in	IN
cord-022053-idft1p6d	508	5	-	-	HYPH
cord-022053-idft1p6d	508	6	house	house	NN
cord-022053-idft1p6d	508	7	real	real	JJ
cord-022053-idft1p6d	508	8	-	-	HYPH
cord-022053-idft1p6d	508	9	time	time	NN
cord-022053-idft1p6d	508	10	LAMP	lamp	NN
cord-022053-idft1p6d	508	11	assays	assay	NNS
cord-022053-idft1p6d	508	12	with	with	IN
cord-022053-idft1p6d	508	13	a	a	DT
cord-022053-idft1p6d	508	14	commercial	commercial	JJ
cord-022053-idft1p6d	508	15	assay	assay	NN
cord-022053-idft1p6d	508	16	for	for	IN
cord-022053-idft1p6d	508	17	the	the	DT
cord-022053-idft1p6d	508	18	detection	detection	NN
cord-022053-idft1p6d	508	19	of	of	IN
cord-022053-idft1p6d	508	20	pathogenic	pathogenic	JJ
cord-022053-idft1p6d	508	21	bacteria	bacteria	NNS
cord-022053-idft1p6d	508	22	Loop	loop	NN
cord-022053-idft1p6d	508	23	-	-	HYPH
cord-022053-idft1p6d	508	24	mediated	mediate	VBN
cord-022053-idft1p6d	508	25	isothermal	isothermal	JJ
cord-022053-idft1p6d	508	26	amplification	amplification	NN
cord-022053-idft1p6d	508	27	(	(	-LRB-
cord-022053-idft1p6d	508	28	LAMP	lamp	NN
cord-022053-idft1p6d	508	29	)	)	-RRB-
cord-022053-idft1p6d	508	30	for	for	IN
cord-022053-idft1p6d	508	31	point	point	NN
cord-022053-idft1p6d	508	32	-	-	HYPH
cord-022053-idft1p6d	508	33	of	of	IN
cord-022053-idft1p6d	508	34	-	-	HYPH
cord-022053-idft1p6d	508	35	care	care	NN
cord-022053-idft1p6d	508	36	detection	detection	NN
cord-022053-idft1p6d	508	37	of	of	IN
cord-022053-idft1p6d	508	38	asymptomatic	asymptomatic	JJ
cord-022053-idft1p6d	508	39	low	low	JJ
cord-022053-idft1p6d	508	40	-	-	HYPH
cord-022053-idft1p6d	508	41	density	density	NN
cord-022053-idft1p6d	508	42	malaria	malaria	NN
cord-022053-idft1p6d	508	43	parasite	parasite	NN
cord-022053-idft1p6d	508	44	carriers	carrier	NNS
cord-022053-idft1p6d	508	45	in	in	IN
cord-022053-idft1p6d	508	46	Zanzibar	Zanzibar	NNP
cord-022053-idft1p6d	508	47	Up	Up	NNP
cord-022053-idft1p6d	508	48	-	-	HYPH
cord-022053-idft1p6d	508	49	date	date	NN
cord-022053-idft1p6d	508	50	on	on	IN
cord-022053-idft1p6d	508	51	diagnostic	diagnostic	JJ
cord-022053-idft1p6d	508	52	strategies	strategy	NNS
cord-022053-idft1p6d	508	53	of	of	IN
cord-022053-idft1p6d	508	54	invasive	invasive	JJ
cord-022053-idft1p6d	508	55	aspergillosis	aspergillosis	NN
cord-022053-idft1p6d	509	1	The	the	DT
cord-022053-idft1p6d	509	2	Use	Use	NNP
cord-022053-idft1p6d	509	3	of	of	IN
cord-022053-idft1p6d	509	4	a	a	DT
cord-022053-idft1p6d	509	5	Commercial	Commercial	NNP
cord-022053-idft1p6d	509	6	Loop	Loop	NNP
cord-022053-idft1p6d	509	7	-	-	HYPH
cord-022053-idft1p6d	509	8	Mediated	mediate	VBN
cord-022053-idft1p6d	509	9	Isothermal	Isothermal	NNP
cord-022053-idft1p6d	509	10	Amplification	Amplification	NNP
cord-022053-idft1p6d	509	11	Assay	Assay	NNP
cord-022053-idft1p6d	509	12	(	(	-LRB-
cord-022053-idft1p6d	509	13	TB	TB	NNP
cord-022053-idft1p6d	509	14	-	-	HYPH
cord-022053-idft1p6d	509	15	LAMP	LAMP	NNP
cord-022053-idft1p6d	509	16	)	)	-RRB-
cord-022053-idft1p6d	509	17	for	for	IN
cord-022053-idft1p6d	509	18	the	the	DT
cord-022053-idft1p6d	509	19	Detection	Detection	NNP
cord-022053-idft1p6d	509	20	of	of	IN
cord-022053-idft1p6d	509	21	Tuberculosis	Tuberculosis	NNP
cord-022053-idft1p6d	509	22	Clinical	clinical	JJ
cord-022053-idft1p6d	509	23	evaluation	evaluation	NN
cord-022053-idft1p6d	509	24	of	of	IN
cord-022053-idft1p6d	509	25	a	a	DT
cord-022053-idft1p6d	509	26	helicase	helicase	NN
cord-022053-idft1p6d	509	27	-	-	HYPH
cord-022053-idft1p6d	509	28	dependant	dependant	JJ
cord-022053-idft1p6d	509	29	amplification	amplification	NN
cord-022053-idft1p6d	509	30	(	(	-LRB-
cord-022053-idft1p6d	509	31	HDA)-based	hda)-based	JJ
cord-022053-idft1p6d	509	32	commercial	commercial	JJ
cord-022053-idft1p6d	509	33	assay	assay	NN
cord-022053-idft1p6d	509	34	for	for	IN
cord-022053-idft1p6d	509	35	the	the	DT
cord-022053-idft1p6d	509	36	simultaneous	simultaneous	JJ
cord-022053-idft1p6d	509	37	detection	detection	NN
cord-022053-idft1p6d	509	38	of	of	IN
cord-022053-idft1p6d	509	39	HSV-1	hsv-1	NN
cord-022053-idft1p6d	509	40	and	and	CC
cord-022053-idft1p6d	509	41	HSV-2	HSV-2	NNP
cord-022053-idft1p6d	509	42	Comparison	comparison	NN
cord-022053-idft1p6d	509	43	of	of	IN
cord-022053-idft1p6d	509	44	transcription	transcription	NN
cord-022053-idft1p6d	509	45	mediated	mediate	VBN
cord-022053-idft1p6d	509	46	amplification	amplification	NN
cord-022053-idft1p6d	509	47	(	(	-LRB-
cord-022053-idft1p6d	509	48	TMA	TMA	NNP
cord-022053-idft1p6d	509	49	)	)	-RRB-
cord-022053-idft1p6d	509	50	and	and	CC
cord-022053-idft1p6d	509	51	reverse	reverse	VB
cord-022053-idft1p6d	509	52	transcription	transcription	NN
cord-022053-idft1p6d	509	53	polymerase	polymerase	NN
cord-022053-idft1p6d	509	54	chain	chain	NN
cord-022053-idft1p6d	509	55	reaction	reaction	NN
cord-022053-idft1p6d	509	56	(	(	-LRB-
cord-022053-idft1p6d	509	57	RT	RT	NNP
cord-022053-idft1p6d	509	58	-	-	HYPH
cord-022053-idft1p6d	509	59	PCR	PCR	NNP
cord-022053-idft1p6d	509	60	)	)	-RRB-
cord-022053-idft1p6d	509	61	for	for	IN
cord-022053-idft1p6d	509	62	detection	detection	NN
cord-022053-idft1p6d	509	63	of	of	IN
cord-022053-idft1p6d	509	64	hepatitis	hepatitis	NN
cord-022053-idft1p6d	509	65	C	C	NNP
cord-022053-idft1p6d	509	66	virus	virus	NN
cord-022053-idft1p6d	509	67	RNA	RNA	NNP
cord-022053-idft1p6d	509	68	in	in	IN
cord-022053-idft1p6d	509	69	liver	liver	NN
cord-022053-idft1p6d	509	70	tissue	tissue	NN
cord-022053-idft1p6d	510	1	Comparative	comparative	JJ
cord-022053-idft1p6d	510	2	evaluation	evaluation	NN
cord-022053-idft1p6d	510	3	of	of	IN
cord-022053-idft1p6d	510	4	the	the	DT
cord-022053-idft1p6d	510	5	Nanosphere	Nanosphere	NNP
cord-022053-idft1p6d	510	6	Verigene	Verigene	NNP
cord-022053-idft1p6d	510	7	RV+	RV+	NNP
cord-022053-idft1p6d	510	8	assay	assay	NN
cord-022053-idft1p6d	510	9	and	and	CC
cord-022053-idft1p6d	510	10	the	the	DT
cord-022053-idft1p6d	510	11	Simplexa	Simplexa	NNP
cord-022053-idft1p6d	510	12	Flu	Flu	NNP
cord-022053-idft1p6d	510	13	A	A	NNP
cord-022053-idft1p6d	510	14	/	/	SYM
cord-022053-idft1p6d	510	15	B	B	NNP
cord-022053-idft1p6d	510	16	&	&	CC
cord-022053-idft1p6d	510	17	RSV	RSV	NNP
cord-022053-idft1p6d	510	18	kit	kit	NN
cord-022053-idft1p6d	510	19	for	for	IN
cord-022053-idft1p6d	510	20	detection	detection	NN
cord-022053-idft1p6d	510	21	of	of	IN
cord-022053-idft1p6d	510	22	influenza	influenza	NN
cord-022053-idft1p6d	510	23	and	and	CC
cord-022053-idft1p6d	510	24	respiratory	respiratory	JJ
cord-022053-idft1p6d	510	25	syncytial	syncytial	JJ
cord-022053-idft1p6d	510	26	viruses	virus	NNS
cord-022053-idft1p6d	510	27	Evaluation	Evaluation	NNP
cord-022053-idft1p6d	510	28	of	of	IN
cord-022053-idft1p6d	510	29	the	the	DT
cord-022053-idft1p6d	510	30	Verigene	Verigene	NNP
cord-022053-idft1p6d	510	31	EP	EP	NNP
cord-022053-idft1p6d	510	32	IUO	IUO	NNP
cord-022053-idft1p6d	510	33	test	test	NN
cord-022053-idft1p6d	510	34	for	for	IN
cord-022053-idft1p6d	510	35	the	the	DT
cord-022053-idft1p6d	510	36	rapid	rapid	JJ
cord-022053-idft1p6d	510	37	detection	detection	NN
cord-022053-idft1p6d	510	38	of	of	IN
cord-022053-idft1p6d	510	39	bacterial	bacterial	JJ
cord-022053-idft1p6d	510	40	and	and	CC
cord-022053-idft1p6d	510	41	toxin	toxin	NN
cord-022053-idft1p6d	510	42	causes	cause	NNS
cord-022053-idft1p6d	510	43	of	of	IN
cord-022053-idft1p6d	510	44	gastrointestinal	gastrointestinal	JJ
cord-022053-idft1p6d	510	45	infection	infection	NN
cord-022053-idft1p6d	510	46	Evaluation	Evaluation	NNP
cord-022053-idft1p6d	510	47	of	of	IN
cord-022053-idft1p6d	510	48	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	510	49	and	and	CC
cord-022053-idft1p6d	510	50	Verigene	Verigene	NNP
cord-022053-idft1p6d	510	51	systems	system	NNS
cord-022053-idft1p6d	510	52	for	for	IN
cord-022053-idft1p6d	510	53	rapid	rapid	JJ
cord-022053-idft1p6d	510	54	identification	identification	NN
cord-022053-idft1p6d	510	55	of	of	IN
cord-022053-idft1p6d	510	56	positive	positive	JJ
cord-022053-idft1p6d	510	57	blood	blood	NN
cord-022053-idft1p6d	510	58	cultures	culture	NNS
cord-022053-idft1p6d	510	59	Evaluation	evaluation	NN
cord-022053-idft1p6d	510	60	and	and	CC
cord-022053-idft1p6d	510	61	verification	verification	NN
cord-022053-idft1p6d	510	62	of	of	IN
cord-022053-idft1p6d	510	63	the	the	DT
cord-022053-idft1p6d	510	64	nanosphere	nanosphere	JJ
cord-022053-idft1p6d	510	65	Verigene	Verigene	NNP
cord-022053-idft1p6d	510	66	RV+	RV+	NNP
cord-022053-idft1p6d	510	67	assay	assay	NN
cord-022053-idft1p6d	510	68	for	for	IN
cord-022053-idft1p6d	510	69	detection	detection	NN
cord-022053-idft1p6d	510	70	of	of	IN
cord-022053-idft1p6d	510	71	influenza	influenza	NN
cord-022053-idft1p6d	510	72	A	a	NN
cord-022053-idft1p6d	510	73	/	/	SYM
cord-022053-idft1p6d	510	74	B	b	NN
cord-022053-idft1p6d	510	75	and	and	CC
cord-022053-idft1p6d	510	76	H1	H1	NNP
cord-022053-idft1p6d	510	77	/	/	SYM
cord-022053-idft1p6d	510	78	H3	H3	NNP
cord-022053-idft1p6d	511	1	subtyping	subtyping	NN
cord-022053-idft1p6d	511	2	Principles	principle	NNS
cord-022053-idft1p6d	511	3	of	of	IN
cord-022053-idft1p6d	511	4	the	the	DT
cord-022053-idft1p6d	511	5	xTAG	xtag	JJ
cord-022053-idft1p6d	511	6	respiratory	respiratory	JJ
cord-022053-idft1p6d	511	7	viral	viral	JJ
cord-022053-idft1p6d	511	8	panel	panel	NN
cord-022053-idft1p6d	511	9	assay	assay	NN
cord-022053-idft1p6d	511	10	(	(	-LRB-
cord-022053-idft1p6d	511	11	RVP	RVP	NNP
cord-022053-idft1p6d	511	12	Assay	Assay	NNP
cord-022053-idft1p6d	511	13	)	)	-RRB-
cord-022053-idft1p6d	512	1	Clinical	clinical	JJ
cord-022053-idft1p6d	512	2	evaluation	evaluation	NN
cord-022053-idft1p6d	512	3	of	of	IN
cord-022053-idft1p6d	512	4	the	the	DT
cord-022053-idft1p6d	512	5	Luminex	Luminex	NNP
cord-022053-idft1p6d	512	6	NxTAG	NxTAG	NNP
cord-022053-idft1p6d	512	7	respiratory	respiratory	JJ
cord-022053-idft1p6d	512	8	pathogen	pathogen	NN
cord-022053-idft1p6d	512	9	panel	panel	NN
cord-022053-idft1p6d	512	10	Comparison	comparison	NN
cord-022053-idft1p6d	512	11	of	of	IN
cord-022053-idft1p6d	512	12	the	the	DT
cord-022053-idft1p6d	512	13	conventional	conventional	JJ
cord-022053-idft1p6d	512	14	multiplex	multiplex	NN
cord-022053-idft1p6d	512	15	RT	RT	NNP
cord-022053-idft1p6d	512	16	-	-	HYPH
cord-022053-idft1p6d	512	17	PCR	PCR	NNP
cord-022053-idft1p6d	512	18	,	,	,
cord-022053-idft1p6d	512	19	real	real	JJ
cord-022053-idft1p6d	512	20	time	time	NN
cord-022053-idft1p6d	512	21	RT	RT	NNP
cord-022053-idft1p6d	512	22	-	-	HYPH
cord-022053-idft1p6d	512	23	PCR	PCR	NNP
cord-022053-idft1p6d	512	24	and	and	CC
cord-022053-idft1p6d	512	25	Luminex	Luminex	NNP
cord-022053-idft1p6d	512	26	xTAG(R	xTAG(R	NNP
cord-022053-idft1p6d	512	27	)	)	-RRB-
cord-022053-idft1p6d	513	1	RVP	RVP	NNP
cord-022053-idft1p6d	513	2	fast	fast	JJ
cord-022053-idft1p6d	513	3	assay	assay	NN
cord-022053-idft1p6d	513	4	for	for	IN
cord-022053-idft1p6d	513	5	the	the	DT
cord-022053-idft1p6d	513	6	detection	detection	NN
cord-022053-idft1p6d	513	7	of	of	IN
cord-022053-idft1p6d	513	8	respiratory	respiratory	JJ
cord-022053-idft1p6d	513	9	viruses	virus	NNS
cord-022053-idft1p6d	513	10	Comparison	comparison	NN
cord-022053-idft1p6d	513	11	of	of	IN
cord-022053-idft1p6d	513	12	the	the	DT
cord-022053-idft1p6d	513	13	Biofire	Biofire	NNP
cord-022053-idft1p6d	513	14	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	513	15	RP	RP	NNP
cord-022053-idft1p6d	513	16	,	,	,
cord-022053-idft1p6d	513	17	Genmark	Genmark	NNP
cord-022053-idft1p6d	513	18	eSensor	eSensor	NNP
cord-022053-idft1p6d	513	19	RVP	RVP	NNP
cord-022053-idft1p6d	513	20	,	,	,
cord-022053-idft1p6d	513	21	Luminex	Luminex	NNP
cord-022053-idft1p6d	513	22	xTAG	xTAG	VBD
cord-022053-idft1p6d	513	23	RVPv1	RVPv1	NNP
cord-022053-idft1p6d	513	24	,	,	,
cord-022053-idft1p6d	513	25	and	and	CC
cord-022053-idft1p6d	513	26	Luminex	Luminex	NNP
cord-022053-idft1p6d	513	27	xTAG	xTAG	VBD
cord-022053-idft1p6d	513	28	RVP	RVP	NNP
cord-022053-idft1p6d	513	29	fast	fast	JJ
cord-022053-idft1p6d	513	30	multiplex	multiplex	JJ
cord-022053-idft1p6d	513	31	assays	assay	NNS
cord-022053-idft1p6d	513	32	for	for	IN
cord-022053-idft1p6d	513	33	detection	detection	NN
cord-022053-idft1p6d	513	34	of	of	IN
cord-022053-idft1p6d	513	35	respiratory	respiratory	JJ
cord-022053-idft1p6d	513	36	viruses	virus	NNS
cord-022053-idft1p6d	513	37	Phylogenetic	phylogenetic	JJ
cord-022053-idft1p6d	513	38	structure	structure	NN
cord-022053-idft1p6d	513	39	of	of	IN
cord-022053-idft1p6d	513	40	the	the	DT
cord-022053-idft1p6d	513	41	prokaryotic	prokaryotic	JJ
cord-022053-idft1p6d	513	42	domain	domain	NN
cord-022053-idft1p6d	513	43	:	:	:
cord-022053-idft1p6d	513	44	the	the	DT
cord-022053-idft1p6d	513	45	primary	primary	JJ
cord-022053-idft1p6d	513	46	kingdoms	kingdom	NNS
cord-022053-idft1p6d	513	47	Then	then	RB
cord-022053-idft1p6d	513	48	and	and	CC
cord-022053-idft1p6d	513	49	now	now	RB
cord-022053-idft1p6d	513	50	:	:	:
cord-022053-idft1p6d	513	51	use	use	NN
cord-022053-idft1p6d	513	52	of	of	IN
cord-022053-idft1p6d	513	53	16S	16S	NNP
cord-022053-idft1p6d	513	54	rDNA	rDNA	NNP
cord-022053-idft1p6d	513	55	gene	gene	NN
cord-022053-idft1p6d	513	56	sequencing	sequencing	NN
cord-022053-idft1p6d	513	57	for	for	IN
cord-022053-idft1p6d	513	58	bacterial	bacterial	JJ
cord-022053-idft1p6d	513	59	identification	identification	NN
cord-022053-idft1p6d	513	60	and	and	CC
cord-022053-idft1p6d	513	61	discovery	discovery	NN
cord-022053-idft1p6d	513	62	of	of	IN
cord-022053-idft1p6d	513	63	novel	novel	JJ
cord-022053-idft1p6d	513	64	bacteria	bacteria	NNS
cord-022053-idft1p6d	513	65	in	in	IN
cord-022053-idft1p6d	513	66	clinical	clinical	JJ
cord-022053-idft1p6d	513	67	microbiology	microbiology	NN
cord-022053-idft1p6d	513	68	laboratories	laboratories	NNPS
cord-022053-idft1p6d	513	69	Report	Report	NNP
cord-022053-idft1p6d	513	70	of	of	IN
cord-022053-idft1p6d	513	71	the	the	DT
cord-022053-idft1p6d	513	72	ad	ad	FW
cord-022053-idft1p6d	513	73	hoc	hoc	FW
cord-022053-idft1p6d	513	74	committee	committee	NNP
cord-022053-idft1p6d	513	75	for	for	IN
cord-022053-idft1p6d	513	76	the	the	DT
cord-022053-idft1p6d	513	77	re	re	NN
cord-022053-idft1p6d	513	78	-	-	NN
cord-022053-idft1p6d	513	79	evaluation	evaluation	NN
cord-022053-idft1p6d	513	80	of	of	IN
cord-022053-idft1p6d	513	81	the	the	DT
cord-022053-idft1p6d	513	82	species	specie	NNS
cord-022053-idft1p6d	513	83	definition	definition	NN
cord-022053-idft1p6d	513	84	in	in	IN
cord-022053-idft1p6d	513	85	bacteriology	bacteriology	NNP
cord-022053-idft1p6d	513	86	Interpretive	Interpretive	NNP
cord-022053-idft1p6d	513	87	Criteria	Criteria	NNP
cord-022053-idft1p6d	513	88	for	for	IN
cord-022053-idft1p6d	513	89	Identification	identification	NN
cord-022053-idft1p6d	513	90	of	of	IN
cord-022053-idft1p6d	513	91	Bacteria	Bacteria	NNS
cord-022053-idft1p6d	513	92	and	and	CC
cord-022053-idft1p6d	513	93	Fungi	fungus	NNS
cord-022053-idft1p6d	513	94	by	by	IN
cord-022053-idft1p6d	513	95	DNA	DNA	NNP
cord-022053-idft1p6d	513	96	Target	Target	NNP
cord-022053-idft1p6d	513	97	Sequencing	Sequencing	NNP
cord-022053-idft1p6d	513	98	;	;	:
cord-022053-idft1p6d	513	99	Approved	Approved	NNP
cord-022053-idft1p6d	513	100	Guideline	Guideline	NNP
cord-022053-idft1p6d	513	101	Broad	Broad	NNP
cord-022053-idft1p6d	513	102	-	-	HYPH
cord-022053-idft1p6d	513	103	range	range	NN
cord-022053-idft1p6d	513	104	16S	16S	NNPS
cord-022053-idft1p6d	513	105	rRNA	rrna	NN
cord-022053-idft1p6d	513	106	gene	gene	NN
cord-022053-idft1p6d	513	107	polymerase	polymerase	NN
cord-022053-idft1p6d	513	108	chain	chain	NN
cord-022053-idft1p6d	513	109	reaction	reaction	NN
cord-022053-idft1p6d	513	110	for	for	IN
cord-022053-idft1p6d	513	111	diagnosis	diagnosis	NN
cord-022053-idft1p6d	513	112	of	of	IN
cord-022053-idft1p6d	513	113	culturenegative	culturenegative	JJ
cord-022053-idft1p6d	513	114	bacterial	bacterial	JJ
cord-022053-idft1p6d	513	115	infections	infection	NNS
cord-022053-idft1p6d	513	116	Utility	Utility	NNP
cord-022053-idft1p6d	513	117	of	of	IN
cord-022053-idft1p6d	513	118	16S	16S	NNP
cord-022053-idft1p6d	513	119	rDNA	rdna	NN
cord-022053-idft1p6d	513	120	sequencing	sequencing	NN
cord-022053-idft1p6d	513	121	for	for	IN
cord-022053-idft1p6d	513	122	identification	identification	NN
cord-022053-idft1p6d	513	123	of	of	IN
cord-022053-idft1p6d	513	124	rare	rare	JJ
cord-022053-idft1p6d	513	125	pathogenic	pathogenic	JJ
cord-022053-idft1p6d	513	126	bacteria	bacteria	NNS
cord-022053-idft1p6d	513	127	Identification	identification	NN
cord-022053-idft1p6d	513	128	of	of	IN
cord-022053-idft1p6d	513	129	bacteria	bacteria	NNS
cord-022053-idft1p6d	513	130	in	in	IN
cord-022053-idft1p6d	513	131	formalin	formalin	NN
cord-022053-idft1p6d	513	132	-	-	HYPH
cord-022053-idft1p6d	513	133	fixed	fix	VBN
cord-022053-idft1p6d	513	134	,	,	,
cord-022053-idft1p6d	513	135	paraffin	paraffin	NN
cord-022053-idft1p6d	513	136	-	-	HYPH
cord-022053-idft1p6d	513	137	embedded	embed	VBN
cord-022053-idft1p6d	513	138	heart	heart	NN
cord-022053-idft1p6d	513	139	valve	valve	NN
cord-022053-idft1p6d	513	140	tissue	tissue	NN
cord-022053-idft1p6d	513	141	via	via	IN
cord-022053-idft1p6d	513	142	16S	16S	NNP
cord-022053-idft1p6d	513	143	rRNA	rrna	NN
cord-022053-idft1p6d	513	144	gene	gene	NN
cord-022053-idft1p6d	513	145	nucleotide	nucleotide	JJ
cord-022053-idft1p6d	513	146	sequencing	sequencing	NN
cord-022053-idft1p6d	513	147	16S	16S	NNP
cord-022053-idft1p6d	513	148	rRNA	rrna	NN
cord-022053-idft1p6d	513	149	sequencing	sequencing	NN
cord-022053-idft1p6d	513	150	in	in	IN
cord-022053-idft1p6d	513	151	routine	routine	JJ
cord-022053-idft1p6d	513	152	bacterial	bacterial	JJ
cord-022053-idft1p6d	513	153	identification	identification	NN
cord-022053-idft1p6d	513	154	:	:	:
cord-022053-idft1p6d	513	155	a	a	DT
cord-022053-idft1p6d	513	156	30-month	30-month	CD
cord-022053-idft1p6d	513	157	experiment	experiment	NN
cord-022053-idft1p6d	513	158	Improved	improve	VBN
cord-022053-idft1p6d	513	159	diagnosis	diagnosis	NN
cord-022053-idft1p6d	513	160	of	of	IN
cord-022053-idft1p6d	513	161	mycobacterial	mycobacterial	JJ
cord-022053-idft1p6d	513	162	infections	infection	NNS
cord-022053-idft1p6d	513	163	in	in	IN
cord-022053-idft1p6d	513	164	formalin	formalin	NN
cord-022053-idft1p6d	513	165	-	-	HYPH
cord-022053-idft1p6d	513	166	fixed	fix	VBN
cord-022053-idft1p6d	513	167	and	and	CC
cord-022053-idft1p6d	513	168	paraffin	paraffin	NN
cord-022053-idft1p6d	513	169	-	-	HYPH
cord-022053-idft1p6d	513	170	embedded	embed	VBN
cord-022053-idft1p6d	513	171	sections	section	NNS
cord-022053-idft1p6d	513	172	with	with	IN
cord-022053-idft1p6d	513	173	nested	nested	JJ
cord-022053-idft1p6d	513	174	polymerase	polymerase	NN
cord-022053-idft1p6d	513	175	chain	chain	NN
cord-022053-idft1p6d	513	176	reaction	reaction	NN
cord-022053-idft1p6d	513	177	Rapid	Rapid	NNP
cord-022053-idft1p6d	513	178	real	real	JJ
cord-022053-idft1p6d	513	179	-	-	HYPH
cord-022053-idft1p6d	513	180	time	time	NN
cord-022053-idft1p6d	513	181	PCR	pcr	NN
cord-022053-idft1p6d	513	182	for	for	IN
cord-022053-idft1p6d	513	183	detection	detection	NN
cord-022053-idft1p6d	513	184	of	of	IN
cord-022053-idft1p6d	513	185	Mycobacterium	Mycobacterium	NNP
cord-022053-idft1p6d	513	186	tuberculosis	tuberculosis	NN
cord-022053-idft1p6d	513	187	complex	complex	JJ
cord-022053-idft1p6d	513	188	DNA	dna	NN
cord-022053-idft1p6d	513	189	in	in	IN
cord-022053-idft1p6d	513	190	formalin	formalin	NN
cord-022053-idft1p6d	513	191	-	-	HYPH
cord-022053-idft1p6d	513	192	fixed	fix	VBN
cord-022053-idft1p6d	513	193	paraffin	paraffin	NN
cord-022053-idft1p6d	513	194	embedded	embed	VBN
cord-022053-idft1p6d	513	195	tissues	tissue	NNS
cord-022053-idft1p6d	513	196	:	:	:
cord-022053-idft1p6d	514	1	16	16	CD
cord-022053-idft1p6d	514	2	%	%	NN
cord-022053-idft1p6d	514	3	of	of	IN
cord-022053-idft1p6d	514	4	histological	histological	JJ
cord-022053-idft1p6d	514	5	'	'	``
cord-022053-idft1p6d	514	6	sarcoid	sarcoid	NN
cord-022053-idft1p6d	514	7	'	'	''
cord-022053-idft1p6d	514	8	may	may	MD
cord-022053-idft1p6d	514	9	contain	contain	VB
cord-022053-idft1p6d	514	10	such	such	JJ
cord-022053-idft1p6d	514	11	DNA	DNA	NNP
cord-022053-idft1p6d	514	12	Broad	Broad	NNP
cord-022053-idft1p6d	514	13	-	-	HYPH
cord-022053-idft1p6d	514	14	range	range	NN
cord-022053-idft1p6d	514	15	PCR	PCR	NNP
cord-022053-idft1p6d	514	16	and	and	CC
cord-022053-idft1p6d	514	17	sequencing	sequencing	NN
cord-022053-idft1p6d	514	18	in	in	IN
cord-022053-idft1p6d	514	19	routine	routine	JJ
cord-022053-idft1p6d	514	20	diagnosis	diagnosis	NN
cord-022053-idft1p6d	514	21	of	of	IN
cord-022053-idft1p6d	514	22	infective	infective	JJ
cord-022053-idft1p6d	514	23	endocarditis	endocarditis	NN
cord-022053-idft1p6d	514	24	Duration	duration	NN
cord-022053-idft1p6d	514	25	of	of	IN
cord-022053-idft1p6d	514	26	hypotension	hypotension	NN
cord-022053-idft1p6d	514	27	before	before	IN
cord-022053-idft1p6d	514	28	initiation	initiation	NN
cord-022053-idft1p6d	514	29	of	of	IN
cord-022053-idft1p6d	514	30	effective	effective	JJ
cord-022053-idft1p6d	514	31	antimicrobial	antimicrobial	JJ
cord-022053-idft1p6d	514	32	therapy	therapy	NN
cord-022053-idft1p6d	514	33	is	be	VBZ
cord-022053-idft1p6d	514	34	the	the	DT
cord-022053-idft1p6d	514	35	critical	critical	JJ
cord-022053-idft1p6d	514	36	determinant	determinant	NN
cord-022053-idft1p6d	514	37	of	of	IN
cord-022053-idft1p6d	514	38	survival	survival	NN
cord-022053-idft1p6d	514	39	in	in	IN
cord-022053-idft1p6d	514	40	human	human	JJ
cord-022053-idft1p6d	514	41	septic	septic	JJ
cord-022053-idft1p6d	514	42	shock	shock	NN
cord-022053-idft1p6d	514	43	Emerging	Emerging	NNP
cord-022053-idft1p6d	514	44	technologies	technology	NNS
cord-022053-idft1p6d	514	45	for	for	IN
cord-022053-idft1p6d	514	46	rapid	rapid	JJ
cord-022053-idft1p6d	514	47	identification	identification	NN
cord-022053-idft1p6d	514	48	of	of	IN
cord-022053-idft1p6d	514	49	bloodstream	bloodstream	NN
cord-022053-idft1p6d	514	50	pathogens	pathogen	NNS
cord-022053-idft1p6d	514	51	ID	ID	NNP
cord-022053-idft1p6d	514	52	learning	learn	VBG
cord-022053-idft1p6d	514	53	unit	unit	NN
cord-022053-idft1p6d	514	54	-	-	HYPH
cord-022053-idft1p6d	514	55	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	514	56	update	update	NN
cord-022053-idft1p6d	514	57	:	:	:
cord-022053-idft1p6d	514	58	current	current	JJ
cord-022053-idft1p6d	514	59	laboratory	laboratory	NN
cord-022053-idft1p6d	514	60	methods	method	NNS
cord-022053-idft1p6d	514	61	for	for	IN
cord-022053-idft1p6d	514	62	rapid	rapid	JJ
cord-022053-idft1p6d	514	63	pathogen	pathogen	NN
cord-022053-idft1p6d	514	64	identification	identification	NN
cord-022053-idft1p6d	514	65	in	in	IN
cord-022053-idft1p6d	514	66	patients	patient	NNS
cord-022053-idft1p6d	514	67	with	with	IN
cord-022053-idft1p6d	514	68	bloodstream	bloodstream	NN
cord-022053-idft1p6d	514	69	infections	infection	NNS
cord-022053-idft1p6d	514	70	Nonculture	Nonculture	NNP
cord-022053-idft1p6d	514	71	techniques	technique	NNS
cord-022053-idft1p6d	514	72	for	for	IN
cord-022053-idft1p6d	514	73	the	the	DT
cord-022053-idft1p6d	514	74	detection	detection	NN
cord-022053-idft1p6d	514	75	of	of	IN
cord-022053-idft1p6d	514	76	bacteremia	bacteremia	NN
cord-022053-idft1p6d	514	77	and	and	CC
cord-022053-idft1p6d	514	78	fungemia	fungemia	NN
cord-022053-idft1p6d	514	79	an	an	DT
cord-022053-idft1p6d	514	80	automated	automate	VBN
cord-022053-idft1p6d	514	81	nested	nested	JJ
cord-022053-idft1p6d	514	82	multiplex	multiplex	NN
cord-022053-idft1p6d	514	83	PCR	pcr	NN
cord-022053-idft1p6d	514	84	system	system	NN
cord-022053-idft1p6d	514	85	for	for	IN
cord-022053-idft1p6d	514	86	multi	multi	JJ
cord-022053-idft1p6d	514	87	-	-	JJ
cord-022053-idft1p6d	514	88	pathogen	pathogen	NN
cord-022053-idft1p6d	514	89	detection	detection	NN
cord-022053-idft1p6d	514	90	:	:	:
cord-022053-idft1p6d	514	91	development	development	NN
cord-022053-idft1p6d	514	92	and	and	CC
cord-022053-idft1p6d	514	93	application	application	NN
cord-022053-idft1p6d	514	94	to	to	IN
cord-022053-idft1p6d	514	95	respiratory	respiratory	JJ
cord-022053-idft1p6d	514	96	tract	tract	NN
cord-022053-idft1p6d	514	97	infection	infection	NN
cord-022053-idft1p6d	515	1	Multicenter	multicenter	JJ
cord-022053-idft1p6d	515	2	evaluation	evaluation	NN
cord-022053-idft1p6d	515	3	of	of	IN
cord-022053-idft1p6d	515	4	the	the	DT
cord-022053-idft1p6d	515	5	BioFire	BioFire	NNP
cord-022053-idft1p6d	515	6	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	515	7	gastrointestinal	gastrointestinal	JJ
cord-022053-idft1p6d	515	8	panel	panel	NN
cord-022053-idft1p6d	515	9	for	for	IN
cord-022053-idft1p6d	515	10	etiologic	etiologic	JJ
cord-022053-idft1p6d	515	11	diagnosis	diagnosis	NN
cord-022053-idft1p6d	515	12	of	of	IN
cord-022053-idft1p6d	515	13	infectious	infectious	JJ
cord-022053-idft1p6d	515	14	gastroenteritis	gastroenteritis	NN
cord-022053-idft1p6d	516	1	Comparative	comparative	JJ
cord-022053-idft1p6d	516	2	evaluation	evaluation	NN
cord-022053-idft1p6d	516	3	of	of	IN
cord-022053-idft1p6d	516	4	two	two	CD
cord-022053-idft1p6d	516	5	commercial	commercial	JJ
cord-022053-idft1p6d	516	6	multiplex	multiplex	NN
cord-022053-idft1p6d	516	7	panels	panel	NNS
cord-022053-idft1p6d	516	8	for	for	IN
cord-022053-idft1p6d	516	9	detection	detection	NN
cord-022053-idft1p6d	516	10	of	of	IN
cord-022053-idft1p6d	516	11	gastrointestinal	gastrointestinal	JJ
cord-022053-idft1p6d	516	12	pathogens	pathogen	NNS
cord-022053-idft1p6d	516	13	by	by	IN
cord-022053-idft1p6d	516	14	use	use	NN
cord-022053-idft1p6d	516	15	of	of	IN
cord-022053-idft1p6d	516	16	clinical	clinical	JJ
cord-022053-idft1p6d	516	17	stool	stool	NN
cord-022053-idft1p6d	516	18	specimens	specimen	NNS
cord-022053-idft1p6d	516	19	Spectrum	Spectrum	NNP
cord-022053-idft1p6d	516	20	of	of	IN
cord-022053-idft1p6d	516	21	enteropathogens	enteropathogen	NNS
cord-022053-idft1p6d	516	22	detected	detect	VBN
cord-022053-idft1p6d	516	23	by	by	IN
cord-022053-idft1p6d	516	24	the	the	DT
cord-022053-idft1p6d	516	25	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	516	26	GI	GI	NNP
cord-022053-idft1p6d	516	27	panel	panel	NN
cord-022053-idft1p6d	516	28	in	in	IN
cord-022053-idft1p6d	516	29	a	a	DT
cord-022053-idft1p6d	516	30	multicentre	multicentre	NNP
cord-022053-idft1p6d	516	31	study	study	NN
cord-022053-idft1p6d	516	32	of	of	IN
cord-022053-idft1p6d	516	33	community	community	NN
cord-022053-idft1p6d	516	34	-	-	HYPH
cord-022053-idft1p6d	516	35	acquired	acquire	VBN
cord-022053-idft1p6d	516	36	gastroenteritis	gastroenteritis	JJ
cord-022053-idft1p6d	516	37	Multi	multi	JJ
cord-022053-idft1p6d	516	38	-	-	JJ
cord-022053-idft1p6d	516	39	center	center	JJ
cord-022053-idft1p6d	516	40	clinical	clinical	JJ
cord-022053-idft1p6d	516	41	evaluation	evaluation	NN
cord-022053-idft1p6d	516	42	of	of	IN
cord-022053-idft1p6d	516	43	a	a	DT
cord-022053-idft1p6d	516	44	multiplex	multiplex	JJ
cord-022053-idft1p6d	516	45	meningitis	meningitis	NN
cord-022053-idft1p6d	516	46	/	/	,
cord-022053-idft1p6d	516	47	encephalitis	encephalitis	RB
cord-022053-idft1p6d	516	48	PCR	PCR	NNP
cord-022053-idft1p6d	516	49	panel	panel	NN
cord-022053-idft1p6d	516	50	for	for	IN
cord-022053-idft1p6d	516	51	simultaneous	simultaneous	JJ
cord-022053-idft1p6d	516	52	detection	detection	NN
cord-022053-idft1p6d	516	53	of	of	IN
cord-022053-idft1p6d	516	54	bacteria	bacteria	NNS
cord-022053-idft1p6d	516	55	,	,	,
cord-022053-idft1p6d	516	56	yeasts	yeast	NNS
cord-022053-idft1p6d	516	57	and	and	CC
cord-022053-idft1p6d	516	58	viruses	virus	NNS
cord-022053-idft1p6d	516	59	in	in	IN
cord-022053-idft1p6d	516	60	cerebrospinal	cerebrospinal	JJ
cord-022053-idft1p6d	516	61	fluid	fluid	NN
cord-022053-idft1p6d	516	62	specimens	specimen	NNS
cord-022053-idft1p6d	516	63	General	General	NNP
cord-022053-idft1p6d	516	64	Meeting	Meeting	NNP
cord-022053-idft1p6d	516	65	Enhancing	enhance	VBG
cord-022053-idft1p6d	516	66	pathogen	pathogen	NN
cord-022053-idft1p6d	516	67	identification	identification	NN
cord-022053-idft1p6d	516	68	in	in	IN
cord-022053-idft1p6d	516	69	patients	patient	NNS
cord-022053-idft1p6d	516	70	with	with	IN
cord-022053-idft1p6d	516	71	meningitis	meningitis	NN
cord-022053-idft1p6d	516	72	and	and	CC
cord-022053-idft1p6d	516	73	a	a	DT
cord-022053-idft1p6d	516	74	negative	negative	JJ
cord-022053-idft1p6d	516	75	Gram	gram	NN
cord-022053-idft1p6d	516	76	stain	stain	NN
cord-022053-idft1p6d	516	77	using	use	VBG
cord-022053-idft1p6d	517	1	the	the	DT
cord-022053-idft1p6d	517	2	BioFire	BioFire	NNP
cord-022053-idft1p6d	517	3	FilmArray((R	FilmArray((R	NNPS
cord-022053-idft1p6d	517	4	)	)	-RRB-
cord-022053-idft1p6d	517	5	)	)	-RRB-
cord-022053-idft1p6d	517	6	meningitis/	meningitis/	CD
cord-022053-idft1p6d	517	7	encephalitis	encephalitis	RB
cord-022053-idft1p6d	517	8	panel	panel	NN
cord-022053-idft1p6d	517	9	Performance	performance	NN
cord-022053-idft1p6d	517	10	evaluation	evaluation	NN
cord-022053-idft1p6d	517	11	of	of	IN
cord-022053-idft1p6d	517	12	the	the	DT
cord-022053-idft1p6d	517	13	Verigene(R	verigene(r	NN
cord-022053-idft1p6d	517	14	)	)	-RRB-
cord-022053-idft1p6d	518	1	(	(	-LRB-
cord-022053-idft1p6d	518	2	Nanosphere	Nanosphere	NNP
cord-022053-idft1p6d	518	3	)	)	-RRB-
cord-022053-idft1p6d	518	4	and	and	CC
cord-022053-idft1p6d	518	5	FilmArray(R	filmarray(r	ADD
cord-022053-idft1p6d	518	6	)	)	-RRB-
cord-022053-idft1p6d	519	1	(	(	-LRB-
cord-022053-idft1p6d	519	2	BioFire(R	BioFire(R	NNP
cord-022053-idft1p6d	519	3	)	)	-RRB-
cord-022053-idft1p6d	519	4	)	)	-RRB-
cord-022053-idft1p6d	520	1	molecular	molecular	JJ
cord-022053-idft1p6d	520	2	assays	assay	NNS
cord-022053-idft1p6d	520	3	for	for	IN
cord-022053-idft1p6d	520	4	identification	identification	NN
cord-022053-idft1p6d	520	5	of	of	IN
cord-022053-idft1p6d	520	6	causative	causative	JJ
cord-022053-idft1p6d	520	7	organisms	organism	NNS
cord-022053-idft1p6d	520	8	in	in	IN
cord-022053-idft1p6d	520	9	bacterial	bacterial	JJ
cord-022053-idft1p6d	520	10	bloodstream	bloodstream	NN
cord-022053-idft1p6d	520	11	infections	infection	NNS
cord-022053-idft1p6d	521	1	Clinical	clinical	JJ
cord-022053-idft1p6d	521	2	evaluation	evaluation	NN
cord-022053-idft1p6d	521	3	of	of	IN
cord-022053-idft1p6d	521	4	the	the	DT
cord-022053-idft1p6d	521	5	FilmArray	FilmArray	NNP
cord-022053-idft1p6d	521	6	blood	blood	NN
cord-022053-idft1p6d	521	7	culture	culture	NN
cord-022053-idft1p6d	521	8	identification	identification	NN
cord-022053-idft1p6d	521	9	panel	panel	NN
cord-022053-idft1p6d	521	10	in	in	IN
cord-022053-idft1p6d	521	11	identification	identification	NN
cord-022053-idft1p6d	521	12	of	of	IN
cord-022053-idft1p6d	521	13	bacteria	bacteria	NNS
cord-022053-idft1p6d	521	14	and	and	CC
cord-022053-idft1p6d	521	15	yeasts	yeast	NNS
cord-022053-idft1p6d	521	16	from	from	IN
cord-022053-idft1p6d	521	17	positive	positive	JJ
cord-022053-idft1p6d	521	18	blood	blood	NN
cord-022053-idft1p6d	521	19	culture	culture	NN
cord-022053-idft1p6d	521	20	bottles	bottle	NNS
cord-022053-idft1p6d	522	1	Multicenter	multicenter	JJ
cord-022053-idft1p6d	522	2	evaluation	evaluation	NN
cord-022053-idft1p6d	522	3	of	of	IN
cord-022053-idft1p6d	522	4	the	the	DT
cord-022053-idft1p6d	522	5	BD	BD	NNP
cord-022053-idft1p6d	522	6	max	max	NNP
cord-022053-idft1p6d	522	7	enteric	enteric	JJ
cord-022053-idft1p6d	522	8	bacterial	bacterial	JJ
cord-022053-idft1p6d	522	9	panel	panel	NN
cord-022053-idft1p6d	522	10	PCR	PCR	NNP
cord-022053-idft1p6d	522	11	assay	assay	NN
cord-022053-idft1p6d	522	12	for	for	IN
cord-022053-idft1p6d	522	13	rapid	rapid	JJ
cord-022053-idft1p6d	522	14	detection	detection	NN
cord-022053-idft1p6d	522	15	of	of	IN
cord-022053-idft1p6d	522	16	Salmonella	Salmonella	NNP
cord-022053-idft1p6d	522	17	spp	spp	NNP
cord-022053-idft1p6d	522	18	.	.	.
cord-022053-idft1p6d	523	1	,	,	,
cord-022053-idft1p6d	523	2	Shigella	Shigella	NNP
cord-022053-idft1p6d	523	3	spp	spp	NNS
cord-022053-idft1p6d	523	4	.	.	.
cord-022053-idft1p6d	524	1	,	,	,
cord-022053-idft1p6d	524	2	Campylobacter	Campylobacter	NNP
cord-022053-idft1p6d	524	3	spp	spp	NNS
cord-022053-idft1p6d	524	4	.	.	.
cord-022053-idft1p6d	525	1	(	(	-LRB-
cord-022053-idft1p6d	525	2	C.	C.	NNP
cord-022053-idft1p6d	525	3	jejuni	jejuni	NNP
cord-022053-idft1p6d	525	4	and	and	CC
cord-022053-idft1p6d	525	5	C.	C.	NNP
cord-022053-idft1p6d	525	6	coli	coli	NNS
cord-022053-idft1p6d	525	7	)	)	-RRB-
cord-022053-idft1p6d	525	8	,	,	,
cord-022053-idft1p6d	525	9	and	and	CC
cord-022053-idft1p6d	525	10	Shiga	Shiga	NNP
cord-022053-idft1p6d	525	11	toxin	toxin	NN
cord-022053-idft1p6d	526	1	1	1	CD
cord-022053-idft1p6d	526	2	and	and	CC
cord-022053-idft1p6d	526	3	2	2	CD
cord-022053-idft1p6d	526	4	genes	gene	NNS
cord-022053-idft1p6d	526	5	Comparison	comparison	NN
cord-022053-idft1p6d	526	6	of	of	IN
cord-022053-idft1p6d	526	7	the	the	DT
cord-022053-idft1p6d	526	8	BD	BD	NNP
cord-022053-idft1p6d	526	9	MAX	MAX	NNP
cord-022053-idft1p6d	526	10	enteric	enteric	JJ
cord-022053-idft1p6d	526	11	bacterial	bacterial	JJ
cord-022053-idft1p6d	526	12	panel	panel	NN
cord-022053-idft1p6d	526	13	to	to	IN
cord-022053-idft1p6d	526	14	routine	routine	JJ
cord-022053-idft1p6d	526	15	culture	culture	NN
cord-022053-idft1p6d	526	16	methods	method	NNS
cord-022053-idft1p6d	526	17	for	for	IN
cord-022053-idft1p6d	526	18	detection	detection	NN
cord-022053-idft1p6d	526	19	of	of	IN
cord-022053-idft1p6d	526	20	Campylobacter	Campylobacter	NNP
cord-022053-idft1p6d	526	21	,	,	,
cord-022053-idft1p6d	526	22	enterohemorrhagic	enterohemorrhagic	JJ
cord-022053-idft1p6d	526	23	Escherichia	escherichia	NN
cord-022053-idft1p6d	526	24	coli	coli	NNS
cord-022053-idft1p6d	526	25	(	(	-LRB-
cord-022053-idft1p6d	526	26	O157	O157	NNP
cord-022053-idft1p6d	526	27	)	)	-RRB-
cord-022053-idft1p6d	526	28	,	,	,
cord-022053-idft1p6d	526	29	Salmonella	Salmonella	NNP
cord-022053-idft1p6d	526	30	,	,	,
cord-022053-idft1p6d	526	31	and	and	CC
cord-022053-idft1p6d	526	32	Shigella	Shigella	NNP
cord-022053-idft1p6d	526	33	isolates	isolate	VBZ
cord-022053-idft1p6d	526	34	in	in	IN
cord-022053-idft1p6d	526	35	preserved	preserve	VBN
cord-022053-idft1p6d	526	36	stool	stool	NN
cord-022053-idft1p6d	526	37	specimens	specimen	NNS
cord-022053-idft1p6d	526	38	Comparison	comparison	NN
cord-022053-idft1p6d	526	39	of	of	IN
cord-022053-idft1p6d	526	40	the	the	DT
cord-022053-idft1p6d	526	41	BD	BD	NNP
cord-022053-idft1p6d	526	42	MAX(R	max(r	CD
cord-022053-idft1p6d	526	43	)	)	-RRB-
cord-022053-idft1p6d	526	44	enteric	enteric	JJ
cord-022053-idft1p6d	526	45	bacterial	bacterial	JJ
cord-022053-idft1p6d	526	46	panel	panel	NN
cord-022053-idft1p6d	526	47	assay	assay	NN
cord-022053-idft1p6d	526	48	with	with	IN
cord-022053-idft1p6d	526	49	conventional	conventional	JJ
cord-022053-idft1p6d	526	50	diagnostic	diagnostic	JJ
cord-022053-idft1p6d	526	51	procedures	procedure	NNS
cord-022053-idft1p6d	526	52	in	in	IN
cord-022053-idft1p6d	526	53	diarrheal	diarrheal	JJ
cord-022053-idft1p6d	526	54	stool	stool	NN
cord-022053-idft1p6d	526	55	samples	sample	NNS
cord-022053-idft1p6d	526	56	Evaluation	Evaluation	NNP
cord-022053-idft1p6d	526	57	of	of	IN
cord-022053-idft1p6d	526	58	the	the	DT
cord-022053-idft1p6d	526	59	BD	BD	NNP
cord-022053-idft1p6d	526	60	Max	Max	NNP
cord-022053-idft1p6d	526	61	enteric	enteric	JJ
cord-022053-idft1p6d	526	62	parasite	parasite	NN
cord-022053-idft1p6d	526	63	panel	panel	NN
cord-022053-idft1p6d	526	64	for	for	IN
cord-022053-idft1p6d	526	65	clinical	clinical	JJ
cord-022053-idft1p6d	526	66	diagnostics	diagnostic	NNS
cord-022053-idft1p6d	526	67	Comparison	comparison	NN
cord-022053-idft1p6d	526	68	of	of	IN
cord-022053-idft1p6d	526	69	three	three	CD
cord-022053-idft1p6d	526	70	commercial	commercial	JJ
cord-022053-idft1p6d	526	71	RT	RT	NNP
cord-022053-idft1p6d	526	72	-	-	HYPH
cord-022053-idft1p6d	526	73	PCR	PCR	NNP
cord-022053-idft1p6d	526	74	systems	system	NNS
cord-022053-idft1p6d	526	75	for	for	IN
cord-022053-idft1p6d	526	76	the	the	DT
cord-022053-idft1p6d	526	77	detection	detection	NN
cord-022053-idft1p6d	526	78	of	of	IN
cord-022053-idft1p6d	526	79	respiratory	respiratory	JJ
cord-022053-idft1p6d	526	80	viruses	virus	NNS
cord-022053-idft1p6d	526	81	Next	next	JJ
cord-022053-idft1p6d	526	82	-	-	HYPH
cord-022053-idft1p6d	526	83	generation	generation	NN
cord-022053-idft1p6d	526	84	sequencing	sequencing	NN
cord-022053-idft1p6d	526	85	for	for	IN
cord-022053-idft1p6d	526	86	infectious	infectious	JJ
cord-022053-idft1p6d	526	87	disease	disease	NN
cord-022053-idft1p6d	526	88	diagnosis	diagnosis	NN
cord-022053-idft1p6d	526	89	and	and	CC
cord-022053-idft1p6d	526	90	management	management	NN
cord-022053-idft1p6d	526	91	:	:	:
cord-022053-idft1p6d	526	92	a	a	DT
cord-022053-idft1p6d	526	93	report	report	NN
cord-022053-idft1p6d	526	94	of	of	IN
cord-022053-idft1p6d	526	95	the	the	DT
cord-022053-idft1p6d	526	96	Association	Association	NNP
cord-022053-idft1p6d	526	97	for	for	IN
cord-022053-idft1p6d	526	98	Molecular	Molecular	NNP
cord-022053-idft1p6d	526	99	Pathology	Pathology	NNP
cord-022053-idft1p6d	526	100	Clinical	clinical	JJ
cord-022053-idft1p6d	526	101	detection	detection	NN
cord-022053-idft1p6d	526	102	and	and	CC
cord-022053-idft1p6d	526	103	characterization	characterization	NN
cord-022053-idft1p6d	526	104	of	of	IN
cord-022053-idft1p6d	526	105	bacterial	bacterial	JJ
cord-022053-idft1p6d	526	106	pathogens	pathogen	NNS
cord-022053-idft1p6d	526	107	in	in	IN
cord-022053-idft1p6d	526	108	the	the	DT
cord-022053-idft1p6d	526	109	genomics	genomic	NNS
cord-022053-idft1p6d	526	110	era	era	NN
cord-022053-idft1p6d	526	111	Routine	routine	JJ
cord-022053-idft1p6d	526	112	use	use	NN
cord-022053-idft1p6d	526	113	of	of	IN
cord-022053-idft1p6d	526	114	microbial	microbial	JJ
cord-022053-idft1p6d	526	115	whole	whole	JJ
cord-022053-idft1p6d	526	116	genome	genome	NN
cord-022053-idft1p6d	526	117	sequencing	sequencing	NN
cord-022053-idft1p6d	526	118	in	in	IN
cord-022053-idft1p6d	526	119	diagnostic	diagnostic	JJ
cord-022053-idft1p6d	526	120	and	and	CC
cord-022053-idft1p6d	526	121	public	public	JJ
cord-022053-idft1p6d	526	122	health	health	NN
cord-022053-idft1p6d	526	123	microbiology	microbiology	NN
cord-022053-idft1p6d	526	124	Tracking	track	VBG
cord-022053-idft1p6d	526	125	a	a	DT
cord-022053-idft1p6d	526	126	hospital	hospital	NN
cord-022053-idft1p6d	526	127	outbreak	outbreak	NN
cord-022053-idft1p6d	526	128	of	of	IN
cord-022053-idft1p6d	526	129	carbapenem	carbapenem	JJ
cord-022053-idft1p6d	526	130	-	-	HYPH
cord-022053-idft1p6d	526	131	resistant	resistant	JJ
cord-022053-idft1p6d	526	132	Klebsiella	Klebsiella	NNP
cord-022053-idft1p6d	526	133	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	526	134	with	with	IN
cord-022053-idft1p6d	526	135	whole	whole	JJ
cord-022053-idft1p6d	526	136	-	-	HYPH
cord-022053-idft1p6d	526	137	genome	genome	NN
cord-022053-idft1p6d	526	138	sequencing	sequencing	NN
cord-022053-idft1p6d	526	139	Single	single	JJ
cord-022053-idft1p6d	526	140	-	-	HYPH
cord-022053-idft1p6d	526	141	molecule	molecule	NN
cord-022053-idft1p6d	526	142	sequencing	sequencing	NN
cord-022053-idft1p6d	526	143	to	to	TO
cord-022053-idft1p6d	526	144	track	track	VB
cord-022053-idft1p6d	526	145	plasmid	plasmid	NN
cord-022053-idft1p6d	526	146	diversity	diversity	NN
cord-022053-idft1p6d	526	147	of	of	IN
cord-022053-idft1p6d	526	148	hospital	hospital	NN
cord-022053-idft1p6d	526	149	-	-	HYPH
cord-022053-idft1p6d	526	150	associated	associate	VBN
cord-022053-idft1p6d	526	151	carbapenemaseproducing	carbapenemaseproduce	VBG
cord-022053-idft1p6d	526	152	Enterobacteriaceae	Enterobacteriaceae	NNP
cord-022053-idft1p6d	526	153	Klebsiella	Klebsiella	NNP
cord-022053-idft1p6d	526	154	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	526	155	Carbapenemase	Carbapenemase	NNP
cord-022053-idft1p6d	527	1	(	(	-LRB-
cord-022053-idft1p6d	527	2	KPC)-producing	kpc)-produce	VBG
cord-022053-idft1p6d	527	3	K.	K.	NNP
cord-022053-idft1p6d	527	4	pneumoniae	pneumoniae	NN
cord-022053-idft1p6d	527	5	at	at	IN
cord-022053-idft1p6d	527	6	a	a	DT
cord-022053-idft1p6d	527	7	single	single	JJ
cord-022053-idft1p6d	527	8	institution	institution	NN
cord-022053-idft1p6d	527	9	:	:	:
cord-022053-idft1p6d	528	1	insights	insight	NNS
cord-022053-idft1p6d	528	2	into	into	IN
cord-022053-idft1p6d	528	3	endemicity	endemicity	NN
cord-022053-idft1p6d	528	4	from	from	IN
cord-022053-idft1p6d	528	5	whole	whole	JJ
cord-022053-idft1p6d	528	6	-	-	HYPH
cord-022053-idft1p6d	528	7	genome	genome	NN
cord-022053-idft1p6d	528	8	sequencing	sequencing	NN
cord-022053-idft1p6d	528	9	Genomically	genomically	RB
cord-022053-idft1p6d	528	10	informed	informed	JJ
cord-022053-idft1p6d	528	11	surveillance	surveillance	NN
cord-022053-idft1p6d	528	12	for	for	IN
cord-022053-idft1p6d	528	13	carbapenem	carbapenem	JJ
cord-022053-idft1p6d	528	14	-	-	HYPH
cord-022053-idft1p6d	528	15	resistant	resistant	JJ
cord-022053-idft1p6d	528	16	enterobacteriaceae	enterobacteriaceae	NNS
cord-022053-idft1p6d	528	17	in	in	IN
cord-022053-idft1p6d	528	18	a	a	DT
cord-022053-idft1p6d	528	19	health	health	NN
cord-022053-idft1p6d	528	20	care	care	NN
cord-022053-idft1p6d	528	21	system	system	NN
cord-022053-idft1p6d	528	22	Plasmid	Plasmid	NNP
cord-022053-idft1p6d	528	23	flux	flux	NN
cord-022053-idft1p6d	528	24	in	in	IN
cord-022053-idft1p6d	528	25	Escherichia	Escherichia	NNP
cord-022053-idft1p6d	528	26	coli	coli	NNS
cord-022053-idft1p6d	529	1	ST131	ST131	NNP
cord-022053-idft1p6d	529	2	sublineages	sublineages	NNP
cord-022053-idft1p6d	529	3	,	,	,
cord-022053-idft1p6d	529	4	analyzed	analyze	VBN
cord-022053-idft1p6d	529	5	by	by	IN
cord-022053-idft1p6d	529	6	plasmid	plasmid	NNP
cord-022053-idft1p6d	529	7	constellation	constellation	NN
cord-022053-idft1p6d	529	8	network	network	NN
cord-022053-idft1p6d	529	9	(	(	-LRB-
cord-022053-idft1p6d	529	10	PLACNET	PLACNET	NNP
cord-022053-idft1p6d	529	11	)	)	-RRB-
cord-022053-idft1p6d	529	12	,	,	,
cord-022053-idft1p6d	529	13	a	a	DT
cord-022053-idft1p6d	529	14	new	new	JJ
cord-022053-idft1p6d	529	15	method	method	NN
cord-022053-idft1p6d	529	16	for	for	IN
cord-022053-idft1p6d	529	17	plasmid	plasmid	NN
cord-022053-idft1p6d	529	18	reconstruction	reconstruction	NN
cord-022053-idft1p6d	529	19	from	from	IN
cord-022053-idft1p6d	529	20	whole	whole	JJ
cord-022053-idft1p6d	529	21	genome	genome	NN
cord-022053-idft1p6d	529	22	sequences	sequence	NNS
cord-022053-idft1p6d	530	1	A	a	DT
cord-022053-idft1p6d	530	2	cloudcompatible	cloudcompatible	JJ
cord-022053-idft1p6d	530	3	bioinformatics	bioinformatics	NN
cord-022053-idft1p6d	530	4	pipeline	pipeline	NN
cord-022053-idft1p6d	530	5	for	for	IN
cord-022053-idft1p6d	530	6	ultrarapid	ultrarapid	NNP
cord-022053-idft1p6d	530	7	pathogen	pathogen	NN
cord-022053-idft1p6d	530	8	identification	identification	NN
cord-022053-idft1p6d	530	9	from	from	IN
cord-022053-idft1p6d	530	10	next	next	JJ
cord-022053-idft1p6d	530	11	-	-	HYPH
cord-022053-idft1p6d	530	12	generation	generation	NN
cord-022053-idft1p6d	530	13	sequencing	sequencing	NN
cord-022053-idft1p6d	530	14	of	of	IN
cord-022053-idft1p6d	530	15	clinical	clinical	JJ
cord-022053-idft1p6d	530	16	samples	sample	NNS
cord-022053-idft1p6d	531	1	Actionable	actionable	JJ
cord-022053-idft1p6d	531	2	diagnosis	diagnosis	NN
cord-022053-idft1p6d	531	3	of	of	IN
cord-022053-idft1p6d	531	4	neuroleptospirosis	neuroleptospirosis	NN
cord-022053-idft1p6d	531	5	by	by	IN
cord-022053-idft1p6d	531	6	next	next	JJ
cord-022053-idft1p6d	531	7	-	-	HYPH
cord-022053-idft1p6d	531	8	generation	generation	NN
cord-022053-idft1p6d	531	9	sequencing	sequencing	NN
cord-022053-idft1p6d	531	10	Mirror	Mirror	NNP
cord-022053-idft1p6d	531	11	,	,	,
cord-022053-idft1p6d	531	12	mirror	mirror	NN
cord-022053-idft1p6d	531	13	on	on	IN
cord-022053-idft1p6d	531	14	the	the	DT
cord-022053-idft1p6d	531	15	wall	wall	NN
cord-022053-idft1p6d	531	16	:	:	:
cord-022053-idft1p6d	531	17	which	which	WDT
cord-022053-idft1p6d	531	18	microbiomes	microbiome	NNS
cord-022053-idft1p6d	531	19	will	will	MD
cord-022053-idft1p6d	531	20	help	help	VB
cord-022053-idft1p6d	531	21	heal	heal	VB
cord-022053-idft1p6d	531	22	them	-PRON-	PRP
cord-022053-idft1p6d	531	23	all	all	PDT
cord-022053-idft1p6d	531	24	The	the	DT
cord-022053-idft1p6d	531	25	microbiome	microbiome	NN
cord-022053-idft1p6d	531	26	revolution	revolution	NN
cord-022053-idft1p6d	532	1	The	the	DT
cord-022053-idft1p6d	532	2	human	human	JJ
cord-022053-idft1p6d	532	3	microbiome	microbiome	NN
cord-022053-idft1p6d	532	4	:	:	:
cord-022053-idft1p6d	532	5	at	at	IN
cord-022053-idft1p6d	532	6	the	the	DT
cord-022053-idft1p6d	532	7	interface	interface	NN
cord-022053-idft1p6d	532	8	of	of	IN
cord-022053-idft1p6d	532	9	health	health	NN
cord-022053-idft1p6d	532	10	and	and	CC
cord-022053-idft1p6d	532	11	disease	disease	NN
cord-022053-idft1p6d	532	12	Sequencing	sequence	VBG
cord-022053-idft1p6d	532	13	the	the	DT
cord-022053-idft1p6d	532	14	human	human	JJ
cord-022053-idft1p6d	532	15	microbiome	microbiome	NN
cord-022053-idft1p6d	532	16	in	in	IN
cord-022053-idft1p6d	532	17	health	health	NN
cord-022053-idft1p6d	532	18	and	and	CC
cord-022053-idft1p6d	532	19	disease	disease	NN
cord-022053-idft1p6d	532	20	Characterization	characterization	NN
cord-022053-idft1p6d	532	21	of	of	IN
cord-022053-idft1p6d	532	22	the	the	DT
cord-022053-idft1p6d	532	23	gut	gut	NN
cord-022053-idft1p6d	532	24	microbiome	microbiome	NN
cord-022053-idft1p6d	532	25	using	use	VBG
cord-022053-idft1p6d	532	26	16S	16s	CD
cord-022053-idft1p6d	532	27	or	or	CC
cord-022053-idft1p6d	532	28	shotgun	shotgun	NN
cord-022053-idft1p6d	532	29	metagenomics	metagenomic	NNS
cord-022053-idft1p6d	532	30	Broad	broad	JJ
cord-022053-idft1p6d	532	31	-	-	HYPH
cord-022053-idft1p6d	532	32	range	range	VBP
cord-022053-idft1p6d	532	33	direct	direct	JJ
cord-022053-idft1p6d	532	34	detection	detection	NN
cord-022053-idft1p6d	532	35	and	and	CC
cord-022053-idft1p6d	532	36	identification	identification	NN
cord-022053-idft1p6d	532	37	of	of	IN
cord-022053-idft1p6d	532	38	fungi	fungus	NNS
cord-022053-idft1p6d	532	39	by	by	IN
cord-022053-idft1p6d	532	40	use	use	NN
cord-022053-idft1p6d	532	41	of	of	IN
cord-022053-idft1p6d	532	42	the	the	DT
cord-022053-idft1p6d	532	43	PLEX	PLEX	NNP
cord-022053-idft1p6d	532	44	-	-	HYPH
cord-022053-idft1p6d	532	45	ID	ID	NNP
cord-022053-idft1p6d	532	46	PCR	PCR	NNP
cord-022053-idft1p6d	532	47	-	-	HYPH
cord-022053-idft1p6d	532	48	electrospray	electrospray	JJ
cord-022053-idft1p6d	532	49	ionization	ionization	NN
cord-022053-idft1p6d	532	50	mass	mass	NN
cord-022053-idft1p6d	532	51	spectrometry	spectrometry	NN
cord-022053-idft1p6d	532	52	(	(	-LRB-
cord-022053-idft1p6d	533	1	ESI	ESI	NNP
cord-022053-idft1p6d	533	2	-	-	HYPH
cord-022053-idft1p6d	533	3	MS	MS	NNP
cord-022053-idft1p6d	533	4	)	)	-RRB-
cord-022053-idft1p6d	533	5	system	system	NN
cord-022053-idft1p6d	534	1	Polymerase	polymerase	NN
cord-022053-idft1p6d	534	2	-	-	HYPH
cord-022053-idft1p6d	534	3	chain	chain	NN
cord-022053-idft1p6d	534	4	reaction	reaction	NN
cord-022053-idft1p6d	534	5	/	/	SYM
cord-022053-idft1p6d	534	6	electrospray	electrospray	JJ
cord-022053-idft1p6d	534	7	ionization	ionization	NN
cord-022053-idft1p6d	534	8	-	-	HYPH
cord-022053-idft1p6d	534	9	mass	mass	NN
cord-022053-idft1p6d	534	10	spectrometry	spectrometry	NN
cord-022053-idft1p6d	534	11	for	for	IN
cord-022053-idft1p6d	534	12	the	the	DT
cord-022053-idft1p6d	534	13	detection	detection	NN
cord-022053-idft1p6d	534	14	of	of	IN
cord-022053-idft1p6d	534	15	bacteria	bacteria	NNS
cord-022053-idft1p6d	534	16	and	and	CC
cord-022053-idft1p6d	534	17	fungi	fungus	NNS
cord-022053-idft1p6d	534	18	in	in	IN
cord-022053-idft1p6d	534	19	bronchoalveolar	bronchoalveolar	JJ
cord-022053-idft1p6d	534	20	lavage	lavage	NN
cord-022053-idft1p6d	534	21	fluids	fluid	NNS
cord-022053-idft1p6d	534	22	:	:	:
cord-022053-idft1p6d	534	23	a	a	DT
cord-022053-idft1p6d	534	24	prospective	prospective	JJ
cord-022053-idft1p6d	534	25	observational	observational	JJ
cord-022053-idft1p6d	534	26	study	study	NN
cord-022053-idft1p6d	534	27	Broad	Broad	NNP
cord-022053-idft1p6d	534	28	-	-	HYPH
cord-022053-idft1p6d	534	29	range	range	NN
cord-022053-idft1p6d	534	30	PCRelectrospray	pcrelectrospray	NN
cord-022053-idft1p6d	534	31	ionization	ionization	NN
cord-022053-idft1p6d	534	32	mass	mass	NN
cord-022053-idft1p6d	534	33	spectrometry	spectrometry	NN
cord-022053-idft1p6d	534	34	for	for	IN
cord-022053-idft1p6d	534	35	detection	detection	NN
cord-022053-idft1p6d	534	36	and	and	CC
cord-022053-idft1p6d	534	37	typing	typing	NN
cord-022053-idft1p6d	534	38	of	of	IN
cord-022053-idft1p6d	534	39	adenovirus	adenovirus	NN
cord-022053-idft1p6d	534	40	and	and	CC
cord-022053-idft1p6d	534	41	other	other	JJ
cord-022053-idft1p6d	534	42	opportunistic	opportunistic	JJ
cord-022053-idft1p6d	534	43	viruses	virus	NNS
cord-022053-idft1p6d	534	44	in	in	IN
cord-022053-idft1p6d	534	45	stem	stem	NN
cord-022053-idft1p6d	534	46	cell	cell	NN
cord-022053-idft1p6d	534	47	transplant	transplant	NN
cord-022053-idft1p6d	534	48	patients	patient	NNS
cord-022053-idft1p6d	534	49	Detection	detection	NN
cord-022053-idft1p6d	534	50	and	and	CC
cord-022053-idft1p6d	534	51	identification	identification	NN
cord-022053-idft1p6d	534	52	of	of	IN
cord-022053-idft1p6d	534	53	yeasts	yeast	NNS
cord-022053-idft1p6d	534	54	from	from	IN
cord-022053-idft1p6d	534	55	formalin	formalin	NN
cord-022053-idft1p6d	534	56	-	-	HYPH
cord-022053-idft1p6d	534	57	fixed	fix	VBN
cord-022053-idft1p6d	534	58	,	,	,
cord-022053-idft1p6d	534	59	paraffinembedded	paraffinembedded	JJ
cord-022053-idft1p6d	534	60	tissue	tissue	NN
cord-022053-idft1p6d	534	61	by	by	IN
cord-022053-idft1p6d	534	62	use	use	NN
cord-022053-idft1p6d	534	63	of	of	IN
cord-022053-idft1p6d	534	64	PCR	pcr	NN
cord-022053-idft1p6d	534	65	-	-	HYPH
cord-022053-idft1p6d	534	66	electrospray	electrospray	JJ
cord-022053-idft1p6d	534	67	ionization	ionization	NN
cord-022053-idft1p6d	534	68	mass	mass	NN
cord-022053-idft1p6d	534	69	spectrometry	spectrometry	NN
cord-022053-idft1p6d	534	70	Advantages	advantage	NNS
cord-022053-idft1p6d	534	71	and	and	CC
cord-022053-idft1p6d	534	72	limitations	limitation	NNS
cord-022053-idft1p6d	534	73	of	of	IN
cord-022053-idft1p6d	534	74	direct	direct	JJ
cord-022053-idft1p6d	534	75	PCR	pcr	NN
cord-022053-idft1p6d	534	76	amplification	amplification	NN
cord-022053-idft1p6d	534	77	of	of	IN
cord-022053-idft1p6d	534	78	bacterial	bacterial	JJ
cord-022053-idft1p6d	534	79	16S	16S	NNPS
cord-022053-idft1p6d	534	80	-	-	HYPH
cord-022053-idft1p6d	534	81	rDNA	rdna	NN
cord-022053-idft1p6d	534	82	from	from	IN
cord-022053-idft1p6d	534	83	resected	resected	JJ
cord-022053-idft1p6d	534	84	heart	heart	NN
cord-022053-idft1p6d	534	85	tissue	tissue	NN
cord-022053-idft1p6d	534	86	or	or	CC
cord-022053-idft1p6d	534	87	swabs	swab	NNS
cord-022053-idft1p6d	534	88	followed	follow	VBN
cord-022053-idft1p6d	534	89	by	by	IN
cord-022053-idft1p6d	534	90	direct	direct	JJ
cord-022053-idft1p6d	534	91	sequencing	sequencing	NN
cord-022053-idft1p6d	534	92	for	for	IN
cord-022053-idft1p6d	534	93	diagnosing	diagnose	VBG
cord-022053-idft1p6d	534	94	infective	infective	JJ
cord-022053-idft1p6d	534	95	endocarditis	endocarditis	NN
cord-022053-idft1p6d	534	96	:	:	:
cord-022053-idft1p6d	534	97	a	a	DT
cord-022053-idft1p6d	534	98	retrospective	retrospective	JJ
cord-022053-idft1p6d	534	99	analysis	analysis	NN
cord-022053-idft1p6d	534	100	in	in	IN
cord-022053-idft1p6d	534	101	the	the	DT
cord-022053-idft1p6d	534	102	routine	routine	JJ
cord-022053-idft1p6d	534	103	clinical	clinical	JJ
cord-022053-idft1p6d	534	104	setting	setting	NN
cord-022053-idft1p6d	534	105	Using	use	VBG
cord-022053-idft1p6d	534	106	PCR	PCR	NNP
cord-022053-idft1p6d	534	107	-	-	HYPH
cord-022053-idft1p6d	534	108	based	base	VBN
cord-022053-idft1p6d	534	109	detection	detection	NN
cord-022053-idft1p6d	534	110	and	and	CC
cord-022053-idft1p6d	534	111	genotyping	genotyping	NN
cord-022053-idft1p6d	534	112	to	to	TO
cord-022053-idft1p6d	534	113	trace	trace	VB
cord-022053-idft1p6d	534	114	Streptococcus	streptococcus	NN
cord-022053-idft1p6d	534	115	salivarius	salivarius	NN
cord-022053-idft1p6d	534	116	meningitis	meningitis	NN
cord-022053-idft1p6d	534	117	outbreak	outbreak	NN
cord-022053-idft1p6d	534	118	strain	strain	NN
cord-022053-idft1p6d	534	119	to	to	IN
cord-022053-idft1p6d	534	120	oral	oral	JJ
cord-022053-idft1p6d	534	121	flora	flora	NNS
cord-022053-idft1p6d	534	122	of	of	IN
cord-022053-idft1p6d	534	123	radiology	radiology	NN
cord-022053-idft1p6d	534	124	physician	physician	NN
cord-022053-idft1p6d	534	125	assistant	assistant	NN
cord-022053-idft1p6d	534	126	Analysis	Analysis	NNP
cord-022053-idft1p6d	534	127	of	of	IN
cord-022053-idft1p6d	534	128	525	525	CD
cord-022053-idft1p6d	534	129	samples	sample	NNS
cord-022053-idft1p6d	534	130	to	to	TO
cord-022053-idft1p6d	534	131	determine	determine	VB
cord-022053-idft1p6d	534	132	the	the	DT
cord-022053-idft1p6d	534	133	usefulness	usefulness	NN
cord-022053-idft1p6d	534	134	of	of	IN
cord-022053-idft1p6d	534	135	PCR	PCR	NNP
cord-022053-idft1p6d	534	136	amplification	amplification	NN
cord-022053-idft1p6d	534	137	and	and	CC
cord-022053-idft1p6d	534	138	sequencing	sequencing	NN
cord-022053-idft1p6d	534	139	of	of	IN
cord-022053-idft1p6d	534	140	the	the	DT
cord-022053-idft1p6d	534	141	16S	16S	NNP
cord-022053-idft1p6d	534	142	rRNA	rrna	NN
cord-022053-idft1p6d	534	143	gene	gene	NN
cord-022053-idft1p6d	534	144	for	for	IN
cord-022053-idft1p6d	534	145	diagnosis	diagnosis	NN
cord-022053-idft1p6d	534	146	of	of	IN
cord-022053-idft1p6d	534	147	bone	bone	NN
cord-022053-idft1p6d	534	148	and	and	CC
cord-022053-idft1p6d	534	149	joint	joint	JJ
cord-022053-idft1p6d	534	150	infections	infection	NNS
cord-022053-idft1p6d	534	151	Whipple	Whipple	NNP
cord-022053-idft1p6d	534	152	disease	disease	NN
cord-022053-idft1p6d	534	153	diagnosed	diagnose	VBN
cord-022053-idft1p6d	534	154	with	with	IN
cord-022053-idft1p6d	534	155	PCR	PCR	NNP
cord-022053-idft1p6d	534	156	using	use	VBG
cord-022053-idft1p6d	534	157	formalin	formalin	NN
cord-022053-idft1p6d	534	158	-	-	HYPH
cord-022053-idft1p6d	534	159	fixed	fix	VBN
cord-022053-idft1p6d	534	160	paraffin	paraffin	NN
cord-022053-idft1p6d	534	161	-	-	HYPH
cord-022053-idft1p6d	534	162	embedded	embed	VBN
cord-022053-idft1p6d	534	163	specimens	specimen	NNS
cord-022053-idft1p6d	534	164	of	of	IN
cord-022053-idft1p6d	534	165	the	the	DT
cord-022053-idft1p6d	534	166	intestinal	intestinal	JJ
cord-022053-idft1p6d	534	167	mucosa	mucosa	NN
cord-022053-idft1p6d	534	168	Use	use	NN
cord-022053-idft1p6d	534	169	of	of	IN
cord-022053-idft1p6d	534	170	broad	broad	JJ
cord-022053-idft1p6d	534	171	range16S	range16	VBG
cord-022053-idft1p6d	534	172	rDNA	rDNA	NNP
cord-022053-idft1p6d	534	173	PCR	PCR	NNP
cord-022053-idft1p6d	534	174	in	in	IN
cord-022053-idft1p6d	534	175	clinical	clinical	JJ
cord-022053-idft1p6d	534	176	microbiology	microbiology	NN
cord-022053-idft1p6d	534	177	Nuclear	Nuclear	NNP
cord-022053-idft1p6d	534	178	ribosomal	ribosomal	JJ
cord-022053-idft1p6d	534	179	internal	internal	JJ
cord-022053-idft1p6d	534	180	transcribed	transcribe	VBN
cord-022053-idft1p6d	534	181	spacer	spacer	NN
cord-022053-idft1p6d	534	182	(	(	-LRB-
cord-022053-idft1p6d	534	183	ITS	its	PRP$
cord-022053-idft1p6d	534	184	)	)	-RRB-
cord-022053-idft1p6d	534	185	region	region	NN
cord-022053-idft1p6d	534	186	as	as	IN
cord-022053-idft1p6d	534	187	a	a	DT
cord-022053-idft1p6d	534	188	universal	universal	JJ
cord-022053-idft1p6d	534	189	DNA	dna	NN
cord-022053-idft1p6d	534	190	barcode	barcode	NN
cord-022053-idft1p6d	534	191	marker	marker	NN
cord-022053-idft1p6d	534	192	for	for	IN
cord-022053-idft1p6d	534	193	Fungi	Fungi	NNP
cord-022053-idft1p6d	534	194	DNA	DNA	NNP
cord-022053-idft1p6d	534	195	barcoding	barcoding	NN
cord-022053-idft1p6d	534	196	of	of	IN
cord-022053-idft1p6d	534	197	fungi	fungus	NNS
cord-022053-idft1p6d	534	198	causing	cause	VBG
cord-022053-idft1p6d	534	199	infections	infection	NNS
cord-022053-idft1p6d	534	200	in	in	IN
cord-022053-idft1p6d	534	201	humans	human	NNS
cord-022053-idft1p6d	534	202	and	and	CC
cord-022053-idft1p6d	534	203	animals	animal	NNS
cord-022053-idft1p6d	534	204	Intraspecific	Intraspecific	NNP
cord-022053-idft1p6d	535	1	ITS	its	PRP$
cord-022053-idft1p6d	535	2	variability	variability	NN
cord-022053-idft1p6d	535	3	in	in	IN
cord-022053-idft1p6d	535	4	the	the	DT
cord-022053-idft1p6d	535	5	kingdom	kingdom	NN
cord-022053-idft1p6d	535	6	fungi	fungus	NNS
cord-022053-idft1p6d	535	7	as	as	IN
cord-022053-idft1p6d	535	8	expressed	express	VBN
cord-022053-idft1p6d	535	9	in	in	IN
cord-022053-idft1p6d	535	10	the	the	DT
cord-022053-idft1p6d	535	11	international	international	JJ
cord-022053-idft1p6d	535	12	sequence	sequence	NN
cord-022053-idft1p6d	535	13	databases	database	NNS
cord-022053-idft1p6d	535	14	and	and	CC
cord-022053-idft1p6d	535	15	its	-PRON-	PRP$
cord-022053-idft1p6d	535	16	implications	implication	NNS
cord-022053-idft1p6d	535	17	for	for	IN
cord-022053-idft1p6d	535	18	molecular	molecular	JJ
cord-022053-idft1p6d	535	19	species	specie	NNS
cord-022053-idft1p6d	535	20	identification	identification	NN
cord-022053-idft1p6d	535	21	Taxonomic	taxonomic	JJ
cord-022053-idft1p6d	535	22	reliability	reliability	NN
cord-022053-idft1p6d	535	23	of	of	IN
cord-022053-idft1p6d	535	24	DNA	dna	NN
cord-022053-idft1p6d	535	25	sequences	sequence	NNS
cord-022053-idft1p6d	535	26	in	in	IN
cord-022053-idft1p6d	535	27	public	public	JJ
cord-022053-idft1p6d	535	28	sequence	sequence	NN
cord-022053-idft1p6d	535	29	databases	database	NNS
cord-022053-idft1p6d	535	30	:	:	:
cord-022053-idft1p6d	535	31	a	a	DT
cord-022053-idft1p6d	535	32	fungal	fungal	NN
cord-022053-idft1p6d	535	33	perspective	perspective	NN
cord-022053-idft1p6d	535	34	Evaluation	evaluation	NN
cord-022053-idft1p6d	535	35	of	of	IN
cord-022053-idft1p6d	535	36	nucleic	nucleic	JJ
cord-022053-idft1p6d	535	37	acid	acid	NN
cord-022053-idft1p6d	535	38	sequencing	sequencing	NN
cord-022053-idft1p6d	535	39	of	of	IN
cord-022053-idft1p6d	535	40	the	the	DT
cord-022053-idft1p6d	535	41	D1	d1	NN
cord-022053-idft1p6d	535	42	/	/	SYM
cord-022053-idft1p6d	535	43	D2	d2	NN
cord-022053-idft1p6d	535	44	region	region	NN
cord-022053-idft1p6d	535	45	of	of	IN
cord-022053-idft1p6d	535	46	the	the	DT
cord-022053-idft1p6d	535	47	large	large	JJ
cord-022053-idft1p6d	535	48	subunit	subunit	NN
cord-022053-idft1p6d	535	49	of	of	IN
cord-022053-idft1p6d	535	50	the	the	DT
cord-022053-idft1p6d	535	51	28S	28S	NNP
cord-022053-idft1p6d	535	52	rDNA	rDNA	NNP
cord-022053-idft1p6d	535	53	and	and	CC
cord-022053-idft1p6d	535	54	the	the	DT
cord-022053-idft1p6d	535	55	internal	internal	JJ
cord-022053-idft1p6d	535	56	transcribed	transcribe	VBN
cord-022053-idft1p6d	535	57	spacer	spacer	NN
cord-022053-idft1p6d	535	58	region	region	NN
cord-022053-idft1p6d	535	59	using	use	VBG
cord-022053-idft1p6d	535	60	SmartGene	SmartGene	NNP
cord-022053-idft1p6d	535	61	IDNS	IDNS	NNP
cord-022053-idft1p6d	535	62	[	[	-LRB-
cord-022053-idft1p6d	535	63	corrected	correct	VBN
cord-022053-idft1p6d	535	64	]	]	-RRB-
cord-022053-idft1p6d	535	65	software	software	NN
cord-022053-idft1p6d	535	66	for	for	IN
cord-022053-idft1p6d	535	67	identification	identification	NN
cord-022053-idft1p6d	535	68	of	of	IN
cord-022053-idft1p6d	535	69	filamentous	filamentous	JJ
cord-022053-idft1p6d	535	70	fungi	fungus	NNS
cord-022053-idft1p6d	535	71	in	in	IN
cord-022053-idft1p6d	535	72	a	a	DT
cord-022053-idft1p6d	535	73	clinical	clinical	JJ
cord-022053-idft1p6d	535	74	laboratory	laboratory	NN
cord-022053-idft1p6d	535	75	International	International	NNP
cord-022053-idft1p6d	535	76	Society	Society	NNP
cord-022053-idft1p6d	535	77	of	of	IN
cord-022053-idft1p6d	535	78	Human	Human	NNP
cord-022053-idft1p6d	535	79	and	and	CC
cord-022053-idft1p6d	535	80	Animal	Animal	NNP
cord-022053-idft1p6d	535	81	Mycology	Mycology	NNP
cord-022053-idft1p6d	536	1	(	(	-LRB-
cord-022053-idft1p6d	536	2	ISHAM)-ITS	ISHAM)-ITS	NNP
cord-022053-idft1p6d	536	3	reference	reference	NN
cord-022053-idft1p6d	536	4	DNA	dna	NN
cord-022053-idft1p6d	536	5	barcoding	barcoding	NN
cord-022053-idft1p6d	536	6	database	database	NN
cord-022053-idft1p6d	536	7	-	-	:
cord-022053-idft1p6d	536	8	the	the	DT
cord-022053-idft1p6d	536	9	quality	quality	NN
cord-022053-idft1p6d	536	10	controlled	control	VBN
cord-022053-idft1p6d	536	11	standard	standard	JJ
cord-022053-idft1p6d	536	12	tool	tool	NN
cord-022053-idft1p6d	536	13	for	for	IN
cord-022053-idft1p6d	536	14	routine	routine	JJ
cord-022053-idft1p6d	536	15	identification	identification	NN
cord-022053-idft1p6d	536	16	of	of	IN
cord-022053-idft1p6d	536	17	human	human	JJ
cord-022053-idft1p6d	536	18	and	and	CC
cord-022053-idft1p6d	536	19	animal	animal	NN
cord-022053-idft1p6d	536	20	pathogenic	pathogenic	JJ
cord-022053-idft1p6d	536	21	fungi	fungus	NNS
cord-022053-idft1p6d	536	22	Reference	reference	NN
cord-022053-idft1p6d	536	23	sequence	sequence	NN
cord-022053-idft1p6d	536	24	(	(	-LRB-
cord-022053-idft1p6d	536	25	RefSeq	RefSeq	NNP
cord-022053-idft1p6d	536	26	)	)	-RRB-
cord-022053-idft1p6d	536	27	database	database	NN
cord-022053-idft1p6d	536	28	at	at	IN
cord-022053-idft1p6d	536	29	NCBI	NCBI	NNP
cord-022053-idft1p6d	536	30	:	:	:
cord-022053-idft1p6d	536	31	current	current	JJ
cord-022053-idft1p6d	536	32	status	status	NN
cord-022053-idft1p6d	536	33	,	,	,
cord-022053-idft1p6d	536	34	taxonomic	taxonomic	JJ
cord-022053-idft1p6d	536	35	expansion	expansion	NN
cord-022053-idft1p6d	536	36	,	,	,
cord-022053-idft1p6d	536	37	and	and	CC
cord-022053-idft1p6d	536	38	functional	functional	JJ
cord-022053-idft1p6d	536	39	annotation	annotation	NN
cord-022053-idft1p6d	536	40	Utility	utility	NN
cord-022053-idft1p6d	536	41	of	of	IN
cord-022053-idft1p6d	536	42	DNA	dna	NN
cord-022053-idft1p6d	536	43	sequencing	sequencing	NN
cord-022053-idft1p6d	536	44	for	for	IN
cord-022053-idft1p6d	536	45	direct	direct	JJ
cord-022053-idft1p6d	536	46	identification	identification	NN
cord-022053-idft1p6d	536	47	of	of	IN
cord-022053-idft1p6d	536	48	invasive	invasive	JJ
cord-022053-idft1p6d	536	49	fungi	fungus	NNS
cord-022053-idft1p6d	536	50	from	from	IN
cord-022053-idft1p6d	536	51	fresh	fresh	JJ
cord-022053-idft1p6d	536	52	and	and	CC
cord-022053-idft1p6d	536	53	formalin	formalin	NN
cord-022053-idft1p6d	536	54	-	-	HYPH
cord-022053-idft1p6d	536	55	fixed	fix	VBN
cord-022053-idft1p6d	536	56	specimens	specimen	NNS
cord-022053-idft1p6d	536	57	Molecular	molecular	JJ
cord-022053-idft1p6d	536	58	methods	method	NNS
cord-022053-idft1p6d	536	59	to	to	TO
cord-022053-idft1p6d	536	60	improve	improve	VB
cord-022053-idft1p6d	536	61	diagnosis	diagnosis	NN
cord-022053-idft1p6d	536	62	and	and	CC
cord-022053-idft1p6d	536	63	identification	identification	NN
cord-022053-idft1p6d	536	64	of	of	IN
cord-022053-idft1p6d	536	65	mucormycosis	mucormycosis	FW
cord-022053-idft1p6d	536	66	Direct	direct	JJ
cord-022053-idft1p6d	536	67	sequencing	sequencing	NN
cord-022053-idft1p6d	536	68	and	and	CC
cord-022053-idft1p6d	536	69	RipSeq	RipSeq	NNP
cord-022053-idft1p6d	536	70	interpretation	interpretation	NN
cord-022053-idft1p6d	536	71	as	as	IN
cord-022053-idft1p6d	536	72	a	a	DT
cord-022053-idft1p6d	536	73	tool	tool	NN
cord-022053-idft1p6d	536	74	for	for	IN
cord-022053-idft1p6d	536	75	identification	identification	NN
cord-022053-idft1p6d	536	76	of	of	IN
cord-022053-idft1p6d	536	77	polymicrobial	polymicrobial	JJ
cord-022053-idft1p6d	536	78	infections	infection	NNS
cord-022053-idft1p6d	536	79	High	high	JJ
cord-022053-idft1p6d	536	80	-	-	HYPH
cord-022053-idft1p6d	536	81	throughput	throughput	NN
cord-022053-idft1p6d	536	82	sequencing	sequencing	NN
cord-022053-idft1p6d	536	83	technologies	technology	NNS
cord-022053-idft1p6d	537	1	A	a	DT
cord-022053-idft1p6d	537	2	glimpse	glimpse	NN
cord-022053-idft1p6d	537	3	into	into	IN
cord-022053-idft1p6d	537	4	past	past	NN
cord-022053-idft1p6d	537	5	,	,	,
cord-022053-idft1p6d	537	6	present	present	JJ
cord-022053-idft1p6d	537	7	,	,	,
cord-022053-idft1p6d	537	8	and	and	CC
cord-022053-idft1p6d	537	9	future	future	JJ
cord-022053-idft1p6d	537	10	DNA	dna	NN
cord-022053-idft1p6d	537	11	sequencing	sequencing	NN
cord-022053-idft1p6d	537	12	Making	make	VBG
cord-022053-idft1p6d	537	13	the	the	DT
cord-022053-idft1p6d	537	14	leap	leap	NN
cord-022053-idft1p6d	537	15	from	from	IN
cord-022053-idft1p6d	537	16	research	research	NN
cord-022053-idft1p6d	537	17	laboratory	laboratory	NN
cord-022053-idft1p6d	537	18	to	to	IN
cord-022053-idft1p6d	537	19	clinic	clinic	NN
cord-022053-idft1p6d	537	20	:	:	:
cord-022053-idft1p6d	537	21	challenges	challenge	NNS
cord-022053-idft1p6d	537	22	and	and	CC
cord-022053-idft1p6d	537	23	opportunities	opportunity	NNS
cord-022053-idft1p6d	537	24	for	for	IN
cord-022053-idft1p6d	537	25	next	next	JJ
cord-022053-idft1p6d	537	26	-	-	HYPH
cord-022053-idft1p6d	537	27	generation	generation	NN
cord-022053-idft1p6d	537	28	sequencing	sequencing	NN
cord-022053-idft1p6d	537	29	in	in	IN
cord-022053-idft1p6d	537	30	infectious	infectious	JJ
cord-022053-idft1p6d	537	31	disease	disease	NN
cord-022053-idft1p6d	537	32	diagnostics	diagnostic	NNS