id	author	title	date	pages	extension	mime	words	sentences	flesch	summary	cache	txt
cord-274332-vuupgg7i	Robinson, Esther R	Genomics and outbreak investigation: from sequence to consequence	2013-04-29		.txt	text/plain	4548	191	34	We conclude that high-throughput sequencing approaches can make a significant contribution to the investigation of outbreaks of bacterial infection and that the integration of WGS with epidemiological investigation, diagnostic assays and antimicrobial susceptibility testing will precipitate radical changes in clinical microbiology and infectious disease epidemiology in the near future. Although we recognize that virologists pioneered the use of WGS for pathogen typing, targeting genomes small enough for WGS with traditional Sanger sequencing [21] , here we will concentrate on the application of WGS to outbreaks of bacterial infection, catalyzed by the recent arrival in the marketplace of a range of technologies that fall under the umbrella term 'high-throughput sequencing' (sometimes called 'next-generation sequencing') [22, 23] .	./cache/cord-274332-vuupgg7i.txt	./txt/cord-274332-vuupgg7i.txt