id sid tid token lemma pos cord-293966-5c466xvz 1 1 key key JJ cord-293966-5c466xvz 1 2 : : : cord-293966-5c466xvz 1 3 cord-293966 cord-293966 NNP cord-293966-5c466xvz 1 4 - - HYPH cord-293966-5c466xvz 1 5 5c466xvz 5c466xvz CD cord-293966-5c466xvz 1 6 authors author NNS cord-293966-5c466xvz 1 7 : : : cord-293966-5c466xvz 1 8 Fehr Fehr NNP cord-293966-5c466xvz 1 9 , , , cord-293966-5c466xvz 1 10 Anthony Anthony NNP cord-293966-5c466xvz 1 11 R. R. NNP cord-293966-5c466xvz 1 12 title title NN cord-293966-5c466xvz 1 13 : : : cord-293966-5c466xvz 1 14 Bacterial Bacterial NNP cord-293966-5c466xvz 1 15 Artificial Artificial NNP cord-293966-5c466xvz 1 16 Chromosome Chromosome NNP cord-293966-5c466xvz 1 17 - - HYPH cord-293966-5c466xvz 1 18 Based Based NNP cord-293966-5c466xvz 1 19 Lambda Lambda NNP cord-293966-5c466xvz 1 20 Red Red NNP cord-293966-5c466xvz 1 21 Recombination Recombination NNP cord-293966-5c466xvz 1 22 with with IN cord-293966-5c466xvz 1 23 the the DT cord-293966-5c466xvz 1 24 I I NNP cord-293966-5c466xvz 1 25 - - HYPH cord-293966-5c466xvz 1 26 SceI SceI NNP cord-293966-5c466xvz 1 27 Homing Homing NNP cord-293966-5c466xvz 1 28 Endonuclease Endonuclease NNP cord-293966-5c466xvz 1 29 for for IN cord-293966-5c466xvz 1 30 Genetic genetic JJ cord-293966-5c466xvz 1 31 Alteration Alteration NNP cord-293966-5c466xvz 1 32 of of IN cord-293966-5c466xvz 1 33 MERS MERS NNP cord-293966-5c466xvz 1 34 - - HYPH cord-293966-5c466xvz 1 35 CoV CoV NNP cord-293966-5c466xvz 1 36 date date NN cord-293966-5c466xvz 1 37 : : : cord-293966-5c466xvz 1 38 2019 2019 CD cord-293966-5c466xvz 1 39 - - HYPH cord-293966-5c466xvz 1 40 09 09 CD cord-293966-5c466xvz 1 41 - - SYM cord-293966-5c466xvz 1 42 14 14 CD cord-293966-5c466xvz 1 43 journal journal NN cord-293966-5c466xvz 1 44 : : : cord-293966-5c466xvz 1 45 MERS MERS NNP cord-293966-5c466xvz 2 1 Coronavirus Coronavirus NNP cord-293966-5c466xvz 2 2 DOI DOI NNP cord-293966-5c466xvz 2 3 : : : cord-293966-5c466xvz 2 4 10.1007/978 10.1007/978 CD cord-293966-5c466xvz 2 5 - - HYPH cord-293966-5c466xvz 2 6 1 1 CD cord-293966-5c466xvz 2 7 - - HYPH cord-293966-5c466xvz 2 8 0716 0716 CD cord-293966-5c466xvz 3 1 -0211 -0211 : cord-293966-5c466xvz 3 2 - - : cord-293966-5c466xvz 3 3 9_5 9_5 CD cord-293966-5c466xvz 4 1 sha sha NNP cord-293966-5c466xvz 4 2 : : : cord-293966-5c466xvz 5 1 7c57bce2fb142a42c410c0ecd1e838012ee79078 7c57bce2fb142a42c410c0ecd1e838012ee79078 CD cord-293966-5c466xvz 5 2 doc_id doc_id CD cord-293966-5c466xvz 5 3 : : : cord-293966-5c466xvz 5 4 293966 293966 CD cord-293966-5c466xvz 5 5 cord_uid cord_uid NNS cord-293966-5c466xvz 5 6 : : : cord-293966-5c466xvz 5 7 5c466xvz 5c466xvz CD cord-293966-5c466xvz 5 8 Over over IN cord-293966-5c466xvz 5 9 the the DT cord-293966-5c466xvz 5 10 past past JJ cord-293966-5c466xvz 5 11 two two CD cord-293966-5c466xvz 5 12 decades decade NNS cord-293966-5c466xvz 6 1 , , , cord-293966-5c466xvz 6 2 several several JJ cord-293966-5c466xvz 6 3 coronavirus coronavirus NN cord-293966-5c466xvz 6 4 ( ( -LRB- cord-293966-5c466xvz 6 5 CoV CoV NNP cord-293966-5c466xvz 6 6 ) ) -RRB- cord-293966-5c466xvz 6 7 infectious infectious JJ cord-293966-5c466xvz 6 8 clones clone NNS cord-293966-5c466xvz 6 9 have have VBP cord-293966-5c466xvz 6 10 been be VBN cord-293966-5c466xvz 6 11 engineered engineer VBN cord-293966-5c466xvz 6 12 , , , cord-293966-5c466xvz 6 13 allowing allow VBG cord-293966-5c466xvz 6 14 for for IN cord-293966-5c466xvz 6 15 the the DT cord-293966-5c466xvz 6 16 manipulation manipulation NN cord-293966-5c466xvz 6 17 of of IN cord-293966-5c466xvz 6 18 their -PRON- PRP$ cord-293966-5c466xvz 6 19 large large JJ cord-293966-5c466xvz 6 20 viral viral JJ cord-293966-5c466xvz 6 21 genomes genome NNS cord-293966-5c466xvz 6 22 ( ( -LRB- cord-293966-5c466xvz 6 23 ~30 ~30 NNP cord-293966-5c466xvz 6 24 kb kb NNP cord-293966-5c466xvz 6 25 ) ) -RRB- cord-293966-5c466xvz 6 26 using use VBG cord-293966-5c466xvz 6 27 unique unique JJ cord-293966-5c466xvz 6 28 reverse reverse JJ cord-293966-5c466xvz 6 29 genetic genetic JJ cord-293966-5c466xvz 6 30 systems system NNS cord-293966-5c466xvz 6 31 . . . cord-293966-5c466xvz 7 1 These these DT cord-293966-5c466xvz 7 2 reverse reverse VBP cord-293966-5c466xvz 7 3 genetic genetic JJ cord-293966-5c466xvz 7 4 systems system NNS cord-293966-5c466xvz 7 5 include include VBP cord-293966-5c466xvz 7 6 targeted target VBN cord-293966-5c466xvz 7 7 recombination recombination NN cord-293966-5c466xvz 7 8 , , , cord-293966-5c466xvz 7 9 in in IN cord-293966-5c466xvz 7 10 vitro vitro FW cord-293966-5c466xvz 7 11 ligation ligation NN cord-293966-5c466xvz 7 12 , , , cord-293966-5c466xvz 7 13 vaccinia vaccinia NN cord-293966-5c466xvz 7 14 virus virus NN cord-293966-5c466xvz 7 15 vectors vector NNS cord-293966-5c466xvz 7 16 , , , cord-293966-5c466xvz 7 17 and and CC cord-293966-5c466xvz 7 18 bacterial bacterial JJ cord-293966-5c466xvz 7 19 artificial artificial JJ cord-293966-5c466xvz 7 20 chromosomes chromosome NNS cord-293966-5c466xvz 7 21 ( ( -LRB- cord-293966-5c466xvz 7 22 BACs bac NNS cord-293966-5c466xvz 7 23 ) ) -RRB- cord-293966-5c466xvz 7 24 . . . cord-293966-5c466xvz 8 1 Quickly quickly RB cord-293966-5c466xvz 8 2 after after IN cord-293966-5c466xvz 8 3 the the DT cord-293966-5c466xvz 8 4 identification identification NN cord-293966-5c466xvz 8 5 of of IN cord-293966-5c466xvz 8 6 Middle Middle NNP cord-293966-5c466xvz 8 7 East East NNP cord-293966-5c466xvz 8 8 respiratory respiratory JJ cord-293966-5c466xvz 8 9 syndrome syndrome NN cord-293966-5c466xvz 8 10 - - HYPH cord-293966-5c466xvz 8 11 CoV cov NN cord-293966-5c466xvz 8 12 ( ( -LRB- cord-293966-5c466xvz 8 13 MERS MERS NNP cord-293966-5c466xvz 8 14 - - HYPH cord-293966-5c466xvz 8 15 CoV CoV NNP cord-293966-5c466xvz 8 16 ) ) -RRB- cord-293966-5c466xvz 8 17 , , , cord-293966-5c466xvz 8 18 both both CC cord-293966-5c466xvz 8 19 in in IN cord-293966-5c466xvz 8 20 vitro vitro FW cord-293966-5c466xvz 8 21 ligation ligation NN cord-293966-5c466xvz 8 22 and and CC cord-293966-5c466xvz 8 23 BAC BAC NNP cord-293966-5c466xvz 8 24 - - HYPH cord-293966-5c466xvz 8 25 based base VBN cord-293966-5c466xvz 8 26 reverse reverse JJ cord-293966-5c466xvz 8 27 genetic genetic JJ cord-293966-5c466xvz 8 28 technologies technology NNS cord-293966-5c466xvz 8 29 were be VBD cord-293966-5c466xvz 8 30 engineered engineer VBN cord-293966-5c466xvz 8 31 for for IN cord-293966-5c466xvz 8 32 MERS MERS NNP cord-293966-5c466xvz 8 33 - - HYPH cord-293966-5c466xvz 8 34 CoV CoV NNP cord-293966-5c466xvz 8 35 to to TO cord-293966-5c466xvz 8 36 study study VB cord-293966-5c466xvz 8 37 its -PRON- PRP$ cord-293966-5c466xvz 8 38 basic basic JJ cord-293966-5c466xvz 8 39 biological biological JJ cord-293966-5c466xvz 8 40 properties property NNS cord-293966-5c466xvz 8 41 , , , cord-293966-5c466xvz 8 42 develop develop VB cord-293966-5c466xvz 8 43 live live RB cord-293966-5c466xvz 8 44 - - HYPH cord-293966-5c466xvz 8 45 attenuated attenuate VBN cord-293966-5c466xvz 8 46 vaccines vaccine NNS cord-293966-5c466xvz 8 47 , , , cord-293966-5c466xvz 8 48 and and CC cord-293966-5c466xvz 8 49 test test VBP cord-293966-5c466xvz 8 50 antiviral antiviral JJ cord-293966-5c466xvz 8 51 drugs drug NNS cord-293966-5c466xvz 8 52 . . . cord-293966-5c466xvz 9 1 Here here RB cord-293966-5c466xvz 9 2 , , , cord-293966-5c466xvz 9 3 I -PRON- PRP cord-293966-5c466xvz 9 4 will will MD cord-293966-5c466xvz 9 5 describe describe VB cord-293966-5c466xvz 9 6 how how WRB cord-293966-5c466xvz 9 7 lambda lambda NN cord-293966-5c466xvz 9 8 red red JJ cord-293966-5c466xvz 9 9 recombination recombination NN cord-293966-5c466xvz 9 10 can can MD cord-293966-5c466xvz 9 11 be be VB cord-293966-5c466xvz 9 12 used use VBN cord-293966-5c466xvz 9 13 with with IN cord-293966-5c466xvz 9 14 the the DT cord-293966-5c466xvz 9 15 MERS MERS NNP cord-293966-5c466xvz 9 16 - - HYPH cord-293966-5c466xvz 9 17 CoV cov NN cord-293966-5c466xvz 9 18 BAC BAC NNP cord-293966-5c466xvz 9 19 to to TO cord-293966-5c466xvz 9 20 quickly quickly RB cord-293966-5c466xvz 9 21 and and CC cord-293966-5c466xvz 9 22 efficiently efficiently RB cord-293966-5c466xvz 9 23 introduce introduce VB cord-293966-5c466xvz 9 24 virtually virtually RB cord-293966-5c466xvz 9 25 any any DT cord-293966-5c466xvz 9 26 type type NN cord-293966-5c466xvz 9 27 of of IN cord-293966-5c466xvz 9 28 genetic genetic JJ cord-293966-5c466xvz 9 29 modification modification NN cord-293966-5c466xvz 9 30 ( ( -LRB- cord-293966-5c466xvz 9 31 point point NN cord-293966-5c466xvz 9 32 mutations mutation NNS cord-293966-5c466xvz 9 33 , , , cord-293966-5c466xvz 9 34 insertions insertion NNS cord-293966-5c466xvz 9 35 , , , cord-293966-5c466xvz 9 36 deletions deletion NNS cord-293966-5c466xvz 9 37 ) ) -RRB- cord-293966-5c466xvz 9 38 into into IN cord-293966-5c466xvz 9 39 the the DT cord-293966-5c466xvz 9 40 MERS MERS NNP cord-293966-5c466xvz 9 41 - - HYPH cord-293966-5c466xvz 9 42 CoV CoV NNP cord-293966-5c466xvz 9 43 genome genome NN cord-293966-5c466xvz 9 44 and and CC cord-293966-5c466xvz 9 45 recover recover VB cord-293966-5c466xvz 9 46 recombinant recombinant JJ cord-293966-5c466xvz 9 47 virus virus NN cord-293966-5c466xvz 9 48 . . . cord-293966-5c466xvz 10 1 Coronaviruses coronaviruse NNS cord-293966-5c466xvz 10 2 are be VBP cord-293966-5c466xvz 10 3 large large JJ cord-293966-5c466xvz 10 4 , , , cord-293966-5c466xvz 10 5 enveloped envelop VBN cord-293966-5c466xvz 10 6 , , , cord-293966-5c466xvz 10 7 single single RB cord-293966-5c466xvz 10 8 - - HYPH cord-293966-5c466xvz 10 9 stranded strand VBN cord-293966-5c466xvz 10 10 positive positive JJ cord-293966-5c466xvz 10 11 - - HYPH cord-293966-5c466xvz 10 12 sense sense NN cord-293966-5c466xvz 10 13 RNA RNA NNP cord-293966-5c466xvz 10 14 viruses virus NNS cord-293966-5c466xvz 10 15 that that WDT cord-293966-5c466xvz 10 16 cause cause VBP cord-293966-5c466xvz 10 17 both both DT cord-293966-5c466xvz 10 18 significant significant JJ cord-293966-5c466xvz 10 19 human human JJ cord-293966-5c466xvz 10 20 and and CC cord-293966-5c466xvz 10 21 veterinary veterinary JJ cord-293966-5c466xvz 10 22 disease disease NN cord-293966-5c466xvz 10 23 . . . cord-293966-5c466xvz 11 1 Prior prior RB cord-293966-5c466xvz 11 2 to to IN cord-293966-5c466xvz 11 3 the the DT cord-293966-5c466xvz 11 4 severe severe JJ cord-293966-5c466xvz 11 5 acute acute JJ cord-293966-5c466xvz 11 6 respiratory respiratory JJ cord-293966-5c466xvz 11 7 syndrome syndrome NN cord-293966-5c466xvz 11 8 - - HYPH cord-293966-5c466xvz 11 9 CoV CoV NNP cord-293966-5c466xvz 11 10 ( ( -LRB- cord-293966-5c466xvz 11 11 SARS SARS NNP cord-293966-5c466xvz 11 12 - - HYPH cord-293966-5c466xvz 11 13 CoV CoV NNP cord-293966-5c466xvz 11 14 ) ) -RRB- cord-293966-5c466xvz 11 15 outbreak outbreak NN cord-293966-5c466xvz 11 16 in in IN cord-293966-5c466xvz 11 17 2003 2003 CD cord-293966-5c466xvz 11 18 , , , cord-293966-5c466xvz 11 19 human human JJ cord-293966-5c466xvz 11 20 CoVs CoVs NNP cord-293966-5c466xvz 11 21 were be VBD cord-293966-5c466xvz 11 22 only only RB cord-293966-5c466xvz 11 23 known know VBN cord-293966-5c466xvz 11 24 to to TO cord-293966-5c466xvz 11 25 cause cause VB cord-293966-5c466xvz 11 26 mild mild JJ cord-293966-5c466xvz 11 27 , , , cord-293966-5c466xvz 11 28 self self NN cord-293966-5c466xvz 11 29 - - HYPH cord-293966-5c466xvz 11 30 limiting limit VBG cord-293966-5c466xvz 11 31 upper upper JJ cord-293966-5c466xvz 11 32 respiratory respiratory JJ cord-293966-5c466xvz 11 33 diseases disease NNS cord-293966-5c466xvz 11 34 . . . cord-293966-5c466xvz 12 1 Approximately approximately RB cord-293966-5c466xvz 12 2 10 10 CD cord-293966-5c466xvz 12 3 years year NNS cord-293966-5c466xvz 12 4 after after IN cord-293966-5c466xvz 12 5 the the DT cord-293966-5c466xvz 12 6 emergence emergence NN cord-293966-5c466xvz 12 7 of of IN cord-293966-5c466xvz 12 8 SARS SARS NNP cord-293966-5c466xvz 12 9 - - HYPH cord-293966-5c466xvz 12 10 CoV CoV NNP cord-293966-5c466xvz 12 11 in in IN cord-293966-5c466xvz 12 12 2012 2012 CD cord-293966-5c466xvz 12 13 , , , cord-293966-5c466xvz 12 14 Middle Middle NNP cord-293966-5c466xvz 12 15 East East NNP cord-293966-5c466xvz 12 16 respiratory respiratory JJ cord-293966-5c466xvz 12 17 syndrome syndrome NN cord-293966-5c466xvz 12 18 ( ( -LRB- cord-293966-5c466xvz 12 19 MERS)-CoV MERS)-CoV NNP cord-293966-5c466xvz 12 20 emerged emerge VBD cord-293966-5c466xvz 12 21 in in IN cord-293966-5c466xvz 12 22 the the DT cord-293966-5c466xvz 12 23 Middle Middle NNP cord-293966-5c466xvz 12 24 East East NNP cord-293966-5c466xvz 12 25 where where WRB cord-293966-5c466xvz 12 26 it -PRON- PRP cord-293966-5c466xvz 12 27 then then RB cord-293966-5c466xvz 12 28 spread spread VBD cord-293966-5c466xvz 12 29 to to IN cord-293966-5c466xvz 12 30 27 27 CD cord-293966-5c466xvz 12 31 different different JJ cord-293966-5c466xvz 12 32 countries country NNS cord-293966-5c466xvz 12 33 , , , cord-293966-5c466xvz 12 34 and and CC cord-293966-5c466xvz 12 35 to to IN cord-293966-5c466xvz 12 36 date date NN cord-293966-5c466xvz 12 37 ( ( -LRB- cord-293966-5c466xvz 12 38 December December NNP cord-293966-5c466xvz 12 39 2018 2018 CD cord-293966-5c466xvz 12 40 , , , cord-293966-5c466xvz 12 41 WHO who WP cord-293966-5c466xvz 12 42 ) ) -RRB- cord-293966-5c466xvz 12 43 there there EX cord-293966-5c466xvz 12 44 have have VBP cord-293966-5c466xvz 12 45 been be VBN cord-293966-5c466xvz 12 46 2278 2278 CD cord-293966-5c466xvz 12 47 laboratoryconfirmed laboratoryconfirme VBN cord-293966-5c466xvz 12 48 cases case NNS cord-293966-5c466xvz 12 49 and and CC cord-293966-5c466xvz 12 50 806 806 CD cord-293966-5c466xvz 12 51 associated associate VBN cord-293966-5c466xvz 12 52 deaths death NNS cord-293966-5c466xvz 12 53 for for IN cord-293966-5c466xvz 12 54 a a DT cord-293966-5c466xvz 12 55 case case NN cord-293966-5c466xvz 12 56 fatality fatality NN cord-293966-5c466xvz 12 57 rate rate NN cord-293966-5c466xvz 12 58 of of IN cord-293966-5c466xvz 12 59 35 35 CD cord-293966-5c466xvz 12 60 % % NN cord-293966-5c466xvz 12 61 . . . cord-293966-5c466xvz 13 1 Most Most JJS cord-293966-5c466xvz 13 2 of of IN cord-293966-5c466xvz 13 3 these these DT cord-293966-5c466xvz 13 4 cases case NNS cord-293966-5c466xvz 13 5 have have VBP cord-293966-5c466xvz 13 6 occurred occur VBN cord-293966-5c466xvz 13 7 in in IN cord-293966-5c466xvz 13 8 the the DT cord-293966-5c466xvz 13 9 Middle Middle NNP cord-293966-5c466xvz 13 10 East East NNP cord-293966-5c466xvz 13 11 , , , cord-293966-5c466xvz 13 12 aside aside RB cord-293966-5c466xvz 13 13 from from IN cord-293966-5c466xvz 13 14 an an DT cord-293966-5c466xvz 13 15 outbreak outbreak NN cord-293966-5c466xvz 13 16 of~200 of~200 ADD cord-293966-5c466xvz 13 17 infected infect VBN cord-293966-5c466xvz 13 18 individuals individual NNS cord-293966-5c466xvz 13 19 in in IN cord-293966-5c466xvz 13 20 South South NNP cord-293966-5c466xvz 13 21 Korea Korea NNP cord-293966-5c466xvz 13 22 in in IN cord-293966-5c466xvz 13 23 2015 2015 CD cord-293966-5c466xvz 13 24 [ [ -LRB- cord-293966-5c466xvz 13 25 1 1 CD cord-293966-5c466xvz 13 26 ] ] -RRB- cord-293966-5c466xvz 13 27 . . . cord-293966-5c466xvz 14 1 Infectious infectious JJ cord-293966-5c466xvz 14 2 clones clone NNS cord-293966-5c466xvz 14 3 are be VBP cord-293966-5c466xvz 14 4 highly highly RB cord-293966-5c466xvz 14 5 valuable valuable JJ cord-293966-5c466xvz 14 6 research research NN cord-293966-5c466xvz 14 7 tools tool NNS cord-293966-5c466xvz 14 8 that that WDT cord-293966-5c466xvz 14 9 enable enable VBP cord-293966-5c466xvz 14 10 modification modification NN cord-293966-5c466xvz 14 11 of of IN cord-293966-5c466xvz 14 12 viral viral JJ cord-293966-5c466xvz 14 13 genomes genome NNS cord-293966-5c466xvz 14 14 to to TO cord-293966-5c466xvz 14 15 better well RBR cord-293966-5c466xvz 14 16 understand understand VB cord-293966-5c466xvz 14 17 their -PRON- PRP$ cord-293966-5c466xvz 14 18 fundamental fundamental JJ cord-293966-5c466xvz 14 19 biology biology NN cord-293966-5c466xvz 14 20 , , , cord-293966-5c466xvz 14 21 develop develop VB cord-293966-5c466xvz 14 22 novel novel JJ cord-293966-5c466xvz 14 23 vaccine vaccine NN cord-293966-5c466xvz 14 24 candidates candidate NNS cord-293966-5c466xvz 14 25 , , , cord-293966-5c466xvz 14 26 and and CC cord-293966-5c466xvz 14 27 test test VBP cord-293966-5c466xvz 14 28 antiviral antiviral JJ cord-293966-5c466xvz 14 29 therapeutics therapeutic NNS cord-293966-5c466xvz 14 30 . . . cord-293966-5c466xvz 15 1 Soon soon RB cord-293966-5c466xvz 15 2 after after IN cord-293966-5c466xvz 15 3 identifying identify VBG cord-293966-5c466xvz 15 4 MERS MERS NNP cord-293966-5c466xvz 15 5 - - HYPH cord-293966-5c466xvz 15 6 CoV CoV NNP cord-293966-5c466xvz 15 7 as as IN cord-293966-5c466xvz 15 8 the the DT cord-293966-5c466xvz 15 9 causative causative JJ cord-293966-5c466xvz 15 10 agent agent NN cord-293966-5c466xvz 15 11 of of IN cord-293966-5c466xvz 15 12 MERS MERS NNP cord-293966-5c466xvz 15 13 , , , cord-293966-5c466xvz 15 14 two two CD cord-293966-5c466xvz 15 15 distinct distinct JJ cord-293966-5c466xvz 15 16 infectious infectious JJ cord-293966-5c466xvz 15 17 clones clone NNS cord-293966-5c466xvz 15 18 were be VBD cord-293966-5c466xvz 15 19 reported report VBN cord-293966-5c466xvz 15 20 for for IN cord-293966-5c466xvz 15 21 MERS MERS NNP cord-293966-5c466xvz 15 22 - - HYPH cord-293966-5c466xvz 15 23 CoV CoV NNP cord-293966-5c466xvz 15 24 [ [ -LRB- cord-293966-5c466xvz 15 25 2 2 CD cord-293966-5c466xvz 15 26 , , , cord-293966-5c466xvz 15 27 3 3 CD cord-293966-5c466xvz 15 28 ] ] -RRB- cord-293966-5c466xvz 15 29 . . . cord-293966-5c466xvz 16 1 These these DT cord-293966-5c466xvz 16 2 infectious infectious JJ cord-293966-5c466xvz 16 3 clones clone NNS cord-293966-5c466xvz 16 4 were be VBD cord-293966-5c466xvz 16 5 engineered engineer VBN cord-293966-5c466xvz 16 6 using use VBG cord-293966-5c466xvz 16 7 in in FW cord-293966-5c466xvz 16 8 vitro vitro FW cord-293966-5c466xvz 16 9 ligation ligation NN cord-293966-5c466xvz 16 10 or or CC cord-293966-5c466xvz 16 11 bacterial bacterial JJ cord-293966-5c466xvz 16 12 artificial artificial JJ cord-293966-5c466xvz 16 13 chromosomes chromosome NNS cord-293966-5c466xvz 16 14 ( ( -LRB- cord-293966-5c466xvz 16 15 BACs bac NNS cord-293966-5c466xvz 16 16 ) ) -RRB- cord-293966-5c466xvz 16 17 , , , cord-293966-5c466xvz 16 18 each each DT cord-293966-5c466xvz 16 19 of of IN cord-293966-5c466xvz 16 20 which which WDT cord-293966-5c466xvz 16 21 had have VBD cord-293966-5c466xvz 16 22 been be VBN cord-293966-5c466xvz 16 23 used use VBN cord-293966-5c466xvz 16 24 previously previously RB cord-293966-5c466xvz 16 25 for for IN cord-293966-5c466xvz 16 26 CoVs CoVs NNP cord-293966-5c466xvz 16 27 [ [ -LRB- cord-293966-5c466xvz 16 28 4 4 CD cord-293966-5c466xvz 16 29 ] ] -RRB- cord-293966-5c466xvz 16 30 [ [ -LRB- cord-293966-5c466xvz 16 31 5 5 CD cord-293966-5c466xvz 16 32 ] ] -RRB- cord-293966-5c466xvz 16 33 [ [ -LRB- cord-293966-5c466xvz 16 34 6 6 CD cord-293966-5c466xvz 16 35 ] ] -RRB- cord-293966-5c466xvz 16 36 . . . cord-293966-5c466xvz 17 1 In in IN cord-293966-5c466xvz 17 2 vitro vitro FW cord-293966-5c466xvz 17 3 ligation ligation NN cord-293966-5c466xvz 17 4 uses use VBZ cord-293966-5c466xvz 17 5 unique unique JJ cord-293966-5c466xvz 17 6 type type NN cord-293966-5c466xvz 17 7 II ii CD cord-293966-5c466xvz 17 8 restriction restriction NN cord-293966-5c466xvz 17 9 endonucleases endonuclease NNS cord-293966-5c466xvz 17 10 that that WDT cord-293966-5c466xvz 17 11 cleave cleave VBP cord-293966-5c466xvz 17 12 several several JJ cord-293966-5c466xvz 17 13 bases basis NNS cord-293966-5c466xvz 17 14 away away RB cord-293966-5c466xvz 17 15 from from IN cord-293966-5c466xvz 17 16 their -PRON- PRP$ cord-293966-5c466xvz 17 17 recognition recognition NN cord-293966-5c466xvz 17 18 site site NN cord-293966-5c466xvz 17 19 , , , cord-293966-5c466xvz 17 20 allowing allow VBG cord-293966-5c466xvz 17 21 for for IN cord-293966-5c466xvz 17 22 the the DT cord-293966-5c466xvz 17 23 reassembly reassembly NN cord-293966-5c466xvz 17 24 of of IN cord-293966-5c466xvz 17 25 authentic authentic JJ cord-293966-5c466xvz 17 26 CoV cov NN cord-293966-5c466xvz 17 27 genomes genome NNS cord-293966-5c466xvz 17 28 from from IN cord-293966-5c466xvz 17 29 smaller small JJR cord-293966-5c466xvz 17 30 fragments fragment NNS cord-293966-5c466xvz 17 31 . . . cord-293966-5c466xvz 18 1 Each each DT cord-293966-5c466xvz 18 2 fragment fragment NN cord-293966-5c466xvz 18 3 is be VBZ cord-293966-5c466xvz 18 4 separately separately RB cord-293966-5c466xvz 18 5 maintained maintain VBN cord-293966-5c466xvz 18 6 in in IN cord-293966-5c466xvz 18 7 its -PRON- PRP$ cord-293966-5c466xvz 18 8 own own JJ cord-293966-5c466xvz 18 9 small small JJ cord-293966-5c466xvz 18 10 plasmid plasmid NN cord-293966-5c466xvz 18 11 for for IN cord-293966-5c466xvz 18 12 efficient efficient JJ cord-293966-5c466xvz 18 13 genetic genetic JJ cord-293966-5c466xvz 18 14 modification modification NN cord-293966-5c466xvz 18 15 using use VBG cord-293966-5c466xvz 18 16 traditional traditional JJ cord-293966-5c466xvz 18 17 molecular molecular JJ cord-293966-5c466xvz 18 18 cloning cloning NN cord-293966-5c466xvz 18 19 methods method NNS cord-293966-5c466xvz 18 20 . . . cord-293966-5c466xvz 19 1 Separating separate VBG cord-293966-5c466xvz 19 2 specific specific JJ cord-293966-5c466xvz 19 3 nucleotide nucleotide JJ cord-293966-5c466xvz 19 4 sequences sequence NNS cord-293966-5c466xvz 19 5 in in IN cord-293966-5c466xvz 19 6 ORF1A ORF1A NNP cord-293966-5c466xvz 19 7 helped help VBD cord-293966-5c466xvz 19 8 to to TO cord-293966-5c466xvz 19 9 eliminate eliminate VB cord-293966-5c466xvz 19 10 the the DT cord-293966-5c466xvz 19 11 problem problem NN cord-293966-5c466xvz 19 12 of of IN cord-293966-5c466xvz 19 13 these these DT cord-293966-5c466xvz 19 14 sequences sequence NNS cord-293966-5c466xvz 19 15 being be VBG cord-293966-5c466xvz 19 16 toxic toxic JJ cord-293966-5c466xvz 19 17 for for IN cord-293966-5c466xvz 19 18 bacteria bacteria NNS cord-293966-5c466xvz 19 19 . . . cord-293966-5c466xvz 20 1 A a DT cord-293966-5c466xvz 20 2 T7 t7 NN cord-293966-5c466xvz 20 3 promoter promoter NN cord-293966-5c466xvz 20 4 is be VBZ cord-293966-5c466xvz 20 5 inserted insert VBN cord-293966-5c466xvz 20 6 at at IN cord-293966-5c466xvz 20 7 the the DT cord-293966-5c466xvz 20 8 5 5 CD cord-293966-5c466xvz 20 9 0 0 CD cord-293966-5c466xvz 20 10 end end NN cord-293966-5c466xvz 20 11 of of IN cord-293966-5c466xvz 20 12 the the DT cord-293966-5c466xvz 20 13 genome genome NN cord-293966-5c466xvz 20 14 , , , cord-293966-5c466xvz 20 15 allowing allow VBG cord-293966-5c466xvz 20 16 for for IN cord-293966-5c466xvz 20 17 in in FW cord-293966-5c466xvz 20 18 vitro vitro FW cord-293966-5c466xvz 20 19 transcription transcription NN cord-293966-5c466xvz 20 20 of of IN cord-293966-5c466xvz 20 21 the the DT cord-293966-5c466xvz 20 22 viral viral JJ cord-293966-5c466xvz 20 23 RNA RNA NNP cord-293966-5c466xvz 20 24 and and CC cord-293966-5c466xvz 20 25 subsequent subsequent JJ cord-293966-5c466xvz 20 26 transfection transfection NN cord-293966-5c466xvz 20 27 into into IN cord-293966-5c466xvz 20 28 mammalian mammalian JJ cord-293966-5c466xvz 20 29 cells cell NNS cord-293966-5c466xvz 20 30 for for IN cord-293966-5c466xvz 20 31 virus virus NN cord-293966-5c466xvz 20 32 production production NN cord-293966-5c466xvz 20 33 . . . cord-293966-5c466xvz 21 1 In in IN cord-293966-5c466xvz 21 2 contrast contrast NN cord-293966-5c466xvz 21 3 , , , cord-293966-5c466xvz 21 4 BACs bac NNS cord-293966-5c466xvz 21 5 allow allow VBP cord-293966-5c466xvz 21 6 for for IN cord-293966-5c466xvz 21 7 the the DT cord-293966-5c466xvz 21 8 stable stable JJ cord-293966-5c466xvz 21 9 propagation propagation NN cord-293966-5c466xvz 21 10 of of IN cord-293966-5c466xvz 21 11 full full JJ cord-293966-5c466xvz 21 12 - - HYPH cord-293966-5c466xvz 21 13 length length NN cord-293966-5c466xvz 21 14 CoV cov NN cord-293966-5c466xvz 21 15 cDNA cdna NN cord-293966-5c466xvz 21 16 in in IN cord-293966-5c466xvz 21 17 bacteria bacteria NNS cord-293966-5c466xvz 21 18 , , , cord-293966-5c466xvz 21 19 due due IN cord-293966-5c466xvz 21 20 to to IN cord-293966-5c466xvz 21 21 the the DT cord-293966-5c466xvz 21 22 ability ability NN cord-293966-5c466xvz 21 23 to to TO cord-293966-5c466xvz 21 24 restrict restrict VB cord-293966-5c466xvz 21 25 their -PRON- PRP$ cord-293966-5c466xvz 21 26 copy copy NN cord-293966-5c466xvz 21 27 number number NN cord-293966-5c466xvz 21 28 to to IN cord-293966-5c466xvz 21 29 1 1 CD cord-293966-5c466xvz 21 30 or or CC cord-293966-5c466xvz 21 31 2 2 CD cord-293966-5c466xvz 21 32 plasmids plasmid NNS cord-293966-5c466xvz 21 33 per per IN cord-293966-5c466xvz 21 34 cell cell NN cord-293966-5c466xvz 21 35 . . . cord-293966-5c466xvz 22 1 Different different JJ cord-293966-5c466xvz 22 2 restriction restriction NN cord-293966-5c466xvz 22 3 fragments fragment NNS cord-293966-5c466xvz 22 4 of of IN cord-293966-5c466xvz 22 5 these these DT cord-293966-5c466xvz 22 6 BACs bac NNS cord-293966-5c466xvz 22 7 can can MD cord-293966-5c466xvz 22 8 be be VB cord-293966-5c466xvz 22 9 sub sub NN cord-293966-5c466xvz 22 10 - - VBN cord-293966-5c466xvz 22 11 cloned clone VBN cord-293966-5c466xvz 22 12 into into IN cord-293966-5c466xvz 22 13 smaller small JJR cord-293966-5c466xvz 22 14 vectors vector NNS cord-293966-5c466xvz 22 15 for for IN cord-293966-5c466xvz 22 16 efficient efficient JJ cord-293966-5c466xvz 22 17 modification modification NN cord-293966-5c466xvz 22 18 , , , cord-293966-5c466xvz 22 19 or or CC cord-293966-5c466xvz 22 20 the the DT cord-293966-5c466xvz 22 21 full full JJ cord-293966-5c466xvz 22 22 - - HYPH cord-293966-5c466xvz 22 23 length length NN cord-293966-5c466xvz 22 24 genome genome NN cord-293966-5c466xvz 22 25 can can MD cord-293966-5c466xvz 22 26 be be VB cord-293966-5c466xvz 22 27 modified modify VBN cord-293966-5c466xvz 22 28 using use VBG cord-293966-5c466xvz 22 29 lambda lambda NN cord-293966-5c466xvz 22 30 red red JJ cord-293966-5c466xvz 22 31 recombination recombination NN cord-293966-5c466xvz 22 32 , , , cord-293966-5c466xvz 22 33 which which WDT cord-293966-5c466xvz 22 34 will will MD cord-293966-5c466xvz 22 35 be be VB cord-293966-5c466xvz 22 36 discussed discuss VBN cord-293966-5c466xvz 22 37 here here RB cord-293966-5c466xvz 22 38 . . . cord-293966-5c466xvz 23 1 CoV CoV NNP cord-293966-5c466xvz 23 2 BAC BAC NNP cord-293966-5c466xvz 23 3 plasmids plasmid NNS cord-293966-5c466xvz 23 4 contain contain VBP cord-293966-5c466xvz 23 5 a a DT cord-293966-5c466xvz 23 6 CMV CMV NNP cord-293966-5c466xvz 23 7 promoter promoter NN cord-293966-5c466xvz 23 8 5 5 CD cord-293966-5c466xvz 23 9 0 0 CD cord-293966-5c466xvz 23 10 of of IN cord-293966-5c466xvz 23 11 the the DT cord-293966-5c466xvz 23 12 viral viral JJ cord-293966-5c466xvz 23 13 genome genome NN cord-293966-5c466xvz 23 14 , , , cord-293966-5c466xvz 23 15 allowing allow VBG cord-293966-5c466xvz 23 16 for for IN cord-293966-5c466xvz 23 17 transcription transcription NN cord-293966-5c466xvz 23 18 of of IN cord-293966-5c466xvz 23 19 the the DT cord-293966-5c466xvz 23 20 viral viral JJ cord-293966-5c466xvz 23 21 genome genome NN cord-293966-5c466xvz 23 22 following follow VBG cord-293966-5c466xvz 23 23 transfection transfection NN cord-293966-5c466xvz 23 24 of of IN cord-293966-5c466xvz 23 25 BAC BAC NNP cord-293966-5c466xvz 23 26 DNA DNA NNP cord-293966-5c466xvz 23 27 into into IN cord-293966-5c466xvz 23 28 mammalian mammalian JJ cord-293966-5c466xvz 23 29 cells cell NNS cord-293966-5c466xvz 23 30 . . . cord-293966-5c466xvz 24 1 In in IN cord-293966-5c466xvz 24 2 addition addition NN cord-293966-5c466xvz 24 3 , , , cord-293966-5c466xvz 24 4 the the DT cord-293966-5c466xvz 24 5 CoV cov NN cord-293966-5c466xvz 24 6 BACs bac NNS cord-293966-5c466xvz 24 7 contain contain VBP cord-293966-5c466xvz 24 8 a a DT cord-293966-5c466xvz 24 9 polyA polyA NNP cord-293966-5c466xvz 24 10 tail tail NN cord-293966-5c466xvz 24 11 , , , cord-293966-5c466xvz 24 12 a a DT cord-293966-5c466xvz 24 13 Hepatitis Hepatitis NNP cord-293966-5c466xvz 24 14 D d NN cord-293966-5c466xvz 24 15 Virus virus NN cord-293966-5c466xvz 24 16 ( ( -LRB- cord-293966-5c466xvz 24 17 HDV HDV NNP cord-293966-5c466xvz 24 18 ) ) -RRB- cord-293966-5c466xvz 24 19 ribozyme ribozyme NN cord-293966-5c466xvz 24 20 , , , cord-293966-5c466xvz 24 21 and and CC cord-293966-5c466xvz 24 22 bovine bovine JJ cord-293966-5c466xvz 24 23 growth growth NN cord-293966-5c466xvz 24 24 hormone hormone NN cord-293966-5c466xvz 24 25 ( ( -LRB- cord-293966-5c466xvz 25 1 BGH BGH NNP cord-293966-5c466xvz 25 2 ) ) -RRB- cord-293966-5c466xvz 25 3 termination termination NN cord-293966-5c466xvz 25 4 and and CC cord-293966-5c466xvz 25 5 polyadenylation polyadenylation NN cord-293966-5c466xvz 25 6 signals signal NNS cord-293966-5c466xvz 25 7 to to TO cord-293966-5c466xvz 25 8 create create VB cord-293966-5c466xvz 25 9 genomic genomic JJ cord-293966-5c466xvz 25 10 RNA RNA NNP cord-293966-5c466xvz 25 11 with with IN cord-293966-5c466xvz 25 12 an an DT cord-293966-5c466xvz 25 13 authentic authentic JJ cord-293966-5c466xvz 25 14 3 3 CD cord-293966-5c466xvz 25 15 0 0 CD cord-293966-5c466xvz 25 16 end end NN cord-293966-5c466xvz 25 17 . . . cord-293966-5c466xvz 26 1 The the DT cord-293966-5c466xvz 26 2 full full JJ cord-293966-5c466xvz 26 3 - - HYPH cord-293966-5c466xvz 26 4 length length NN cord-293966-5c466xvz 26 5 nature nature NN cord-293966-5c466xvz 26 6 of of IN cord-293966-5c466xvz 26 7 BAC BAC NNP cord-293966-5c466xvz 26 8 DNA DNA NNP cord-293966-5c466xvz 26 9 and and CC cord-293966-5c466xvz 26 10 the the DT cord-293966-5c466xvz 26 11 CMV CMV NNP cord-293966-5c466xvz 26 12 promoter promoter NN cord-293966-5c466xvz 26 13 subvert subvert VBP cord-293966-5c466xvz 26 14 the the DT cord-293966-5c466xvz 26 15 need need NN cord-293966-5c466xvz 26 16 for for IN cord-293966-5c466xvz 26 17 in in FW cord-293966-5c466xvz 26 18 vitro vitro FW cord-293966-5c466xvz 26 19 ligation ligation NN cord-293966-5c466xvz 26 20 or or CC cord-293966-5c466xvz 26 21 transcription transcription NN cord-293966-5c466xvz 26 22 to to TO cord-293966-5c466xvz 26 23 recover recover VB cord-293966-5c466xvz 26 24 infectious infectious JJ cord-293966-5c466xvz 26 25 virus virus NN cord-293966-5c466xvz 26 26 . . . cord-293966-5c466xvz 27 1 BACs bac NNS cord-293966-5c466xvz 27 2 were be VBD cord-293966-5c466xvz 27 3 initially initially RB cord-293966-5c466xvz 27 4 developed develop VBN cord-293966-5c466xvz 27 5 in in IN cord-293966-5c466xvz 27 6 the the DT cord-293966-5c466xvz 27 7 early early JJ cord-293966-5c466xvz 27 8 1990s 1990 NNS cord-293966-5c466xvz 27 9 , , , cord-293966-5c466xvz 27 10 and and CC cord-293966-5c466xvz 27 11 by by IN cord-293966-5c466xvz 27 12 the the DT cord-293966-5c466xvz 27 13 mid mid JJ cord-293966-5c466xvz 27 14 - - JJ cord-293966-5c466xvz 27 15 late late JJ cord-293966-5c466xvz 27 16 1990s 1990 NNS cord-293966-5c466xvz 27 17 they -PRON- PRP cord-293966-5c466xvz 27 18 were be VBD cord-293966-5c466xvz 27 19 utilized utilize VBN cord-293966-5c466xvz 27 20 by by IN cord-293966-5c466xvz 27 21 Herpes Herpes NNP cord-293966-5c466xvz 27 22 virologists virologist NNS cord-293966-5c466xvz 27 23 for for IN cord-293966-5c466xvz 27 24 modification modification NN cord-293966-5c466xvz 27 25 of of IN cord-293966-5c466xvz 27 26 these these DT cord-293966-5c466xvz 27 27 large large JJ cord-293966-5c466xvz 27 28 DNA dna NN cord-293966-5c466xvz 27 29 viruses virus NNS cord-293966-5c466xvz 27 30 , , , cord-293966-5c466xvz 27 31 which which WDT cord-293966-5c466xvz 27 32 revolutionized revolutionize VBD cord-293966-5c466xvz 27 33 the the DT cord-293966-5c466xvz 27 34 field field NN cord-293966-5c466xvz 27 35 . . . cord-293966-5c466xvz 28 1 A a DT cord-293966-5c466xvz 28 2 few few JJ cord-293966-5c466xvz 28 3 years year NNS cord-293966-5c466xvz 28 4 later later RB cord-293966-5c466xvz 28 5 a a DT cord-293966-5c466xvz 28 6 BAC bac NN cord-293966-5c466xvz 28 7 for for IN cord-293966-5c466xvz 28 8 a a DT cord-293966-5c466xvz 28 9 CoV cov NN cord-293966-5c466xvz 28 10 , , , cord-293966-5c466xvz 28 11 transmissible transmissible JJ cord-293966-5c466xvz 28 12 gastroenteritis gastroenteritis NN cord-293966-5c466xvz 28 13 virus virus NN cord-293966-5c466xvz 28 14 ( ( -LRB- cord-293966-5c466xvz 28 15 TGEV TGEV NNP cord-293966-5c466xvz 28 16 ) ) -RRB- cord-293966-5c466xvz 28 17 , , , cord-293966-5c466xvz 28 18 was be VBD cord-293966-5c466xvz 28 19 engineered engineer VBN cord-293966-5c466xvz 28 20 , , , cord-293966-5c466xvz 28 21 and and CC cord-293966-5c466xvz 28 22 since since IN cord-293966-5c466xvz 28 23 then then RB cord-293966-5c466xvz 28 24 BACs bac NNS cord-293966-5c466xvz 28 25 have have VBP cord-293966-5c466xvz 28 26 been be VBN cord-293966-5c466xvz 28 27 successfully successfully RB cord-293966-5c466xvz 28 28 developed develop VBN cord-293966-5c466xvz 28 29 for for IN cord-293966-5c466xvz 28 30 several several JJ cord-293966-5c466xvz 28 31 CoVs CoVs NNP cord-293966-5c466xvz 28 32 including include VBG cord-293966-5c466xvz 28 33 feline feline JJ cord-293966-5c466xvz 28 34 infectious infectious JJ cord-293966-5c466xvz 28 35 peritonitis peritonitis NN cord-293966-5c466xvz 28 36 virus virus NN cord-293966-5c466xvz 28 37 ( ( -LRB- cord-293966-5c466xvz 28 38 FIPV FIPV NNP cord-293966-5c466xvz 28 39 ) ) -RRB- cord-293966-5c466xvz 28 40 , , , cord-293966-5c466xvz 28 41 OC-43 OC-43 NNP cord-293966-5c466xvz 28 42 , , , cord-293966-5c466xvz 28 43 SARS SARS NNP cord-293966-5c466xvz 28 44 - - HYPH cord-293966-5c466xvz 28 45 CoV CoV NNP cord-293966-5c466xvz 28 46 , , , cord-293966-5c466xvz 28 47 MERS MERS NNP cord-293966-5c466xvz 28 48 - - HYPH cord-293966-5c466xvz 28 49 CoV CoV NNP cord-293966-5c466xvz 28 50 , , , cord-293966-5c466xvz 29 1 murine murine JJ cord-293966-5c466xvz 29 2 hepatitis hepatitis NNP cord-293966-5c466xvz 29 3 virus virus NN cord-293966-5c466xvz 29 4 strain strain NN cord-293966-5c466xvz 29 5 JHM JHM NNP cord-293966-5c466xvz 30 1 ( ( -LRB- cord-293966-5c466xvz 30 2 MHV MHV NNP cord-293966-5c466xvz 30 3 - - HYPH cord-293966-5c466xvz 30 4 JHM JHM NNP cord-293966-5c466xvz 30 5 ) ) -RRB- cord-293966-5c466xvz 30 6 , , , cord-293966-5c466xvz 30 7 porcine porcine JJ cord-293966-5c466xvz 30 8 epidemic epidemic NN cord-293966-5c466xvz 30 9 diarrhea diarrhea NN cord-293966-5c466xvz 30 10 virus virus NN cord-293966-5c466xvz 30 11 ( ( -LRB- cord-293966-5c466xvz 30 12 PEDV PEDV NNP cord-293966-5c466xvz 30 13 ) ) -RRB- cord-293966-5c466xvz 30 14 , , , cord-293966-5c466xvz 30 15 and and CC cord-293966-5c466xvz 30 16 the the DT cord-293966-5c466xvz 30 17 SARS SARS NNP cord-293966-5c466xvz 30 18 - - HYPH cord-293966-5c466xvz 30 19 like like JJ cord-293966-5c466xvz 30 20 CoV CoV NNP cord-293966-5c466xvz 30 21 WIV-1 WIV-1 NNP cord-293966-5c466xvz 31 1 [ [ -LRB- cord-293966-5c466xvz 31 2 2 2 CD cord-293966-5c466xvz 31 3 , , , cord-293966-5c466xvz 31 4 4 4 CD cord-293966-5c466xvz 31 5 , , , cord-293966-5c466xvz 31 6 [ [ -LRB- cord-293966-5c466xvz 31 7 7 7 CD cord-293966-5c466xvz 31 8 ] ] -RRB- cord-293966-5c466xvz 31 9 [ [ -LRB- cord-293966-5c466xvz 31 10 8 8 CD cord-293966-5c466xvz 31 11 ] ] -RRB- cord-293966-5c466xvz 31 12 [ [ -LRB- cord-293966-5c466xvz 31 13 9 9 CD cord-293966-5c466xvz 31 14 ] ] -RRB- cord-293966-5c466xvz 31 15 [ [ -LRB- cord-293966-5c466xvz 31 16 10 10 CD cord-293966-5c466xvz 31 17 ] ] -RRB- cord-293966-5c466xvz 31 18 [ [ -LRB- cord-293966-5c466xvz 31 19 11 11 CD cord-293966-5c466xvz 31 20 ] ] -RRB- cord-293966-5c466xvz 31 21 [ [ -LRB- cord-293966-5c466xvz 31 22 12 12 CD cord-293966-5c466xvz 31 23 ] ] -RRB- cord-293966-5c466xvz 31 24 . . . cord-293966-5c466xvz 32 1 Thus thus RB cord-293966-5c466xvz 32 2 , , , cord-293966-5c466xvz 32 3 it -PRON- PRP cord-293966-5c466xvz 32 4 is be VBZ cord-293966-5c466xvz 32 5 likely likely JJ cord-293966-5c466xvz 32 6 that that IN cord-293966-5c466xvz 32 7 BAC BAC NNP cord-293966-5c466xvz 32 8 - - HYPH cord-293966-5c466xvz 32 9 based base VBN cord-293966-5c466xvz 32 10 reverse reverse NN cord-293966-5c466xvz 32 11 genetics genetic NNS cord-293966-5c466xvz 32 12 could could MD cord-293966-5c466xvz 32 13 be be VB cord-293966-5c466xvz 32 14 useful useful JJ cord-293966-5c466xvz 32 15 for for IN cord-293966-5c466xvz 32 16 any any DT cord-293966-5c466xvz 32 17 novel novel JJ cord-293966-5c466xvz 32 18 or or CC cord-293966-5c466xvz 32 19 emergent emergent JJ cord-293966-5c466xvz 32 20 CoV. cov. NN cord-293966-5c466xvz 33 1 Lambda lambda NN cord-293966-5c466xvz 33 2 red red JJ cord-293966-5c466xvz 33 3 recombination recombination NN cord-293966-5c466xvz 33 4 utilizes utilize VBZ cord-293966-5c466xvz 33 5 bacteriophage bacteriophage NN cord-293966-5c466xvz 33 6 enzymes enzyme VBZ cord-293966-5c466xvz 33 7 Exo Exo NNP cord-293966-5c466xvz 33 8 , , , cord-293966-5c466xvz 33 9 Beta Beta NNP cord-293966-5c466xvz 33 10 , , , cord-293966-5c466xvz 33 11 and and CC cord-293966-5c466xvz 33 12 Gam Gam NNP cord-293966-5c466xvz 33 13 ( ( -LRB- cord-293966-5c466xvz 33 14 Red red JJ cord-293966-5c466xvz 33 15 proteins protein NNS cord-293966-5c466xvz 33 16 ) ) -RRB- cord-293966-5c466xvz 33 17 to to TO cord-293966-5c466xvz 33 18 mediate mediate VB cord-293966-5c466xvz 33 19 homologous homologous JJ cord-293966-5c466xvz 33 20 recombination recombination NN cord-293966-5c466xvz 33 21 near near IN cord-293966-5c466xvz 33 22 the the DT cord-293966-5c466xvz 33 23 ends end NNS cord-293966-5c466xvz 33 24 of of IN cord-293966-5c466xvz 33 25 linear linear JJ cord-293966-5c466xvz 33 26 double double RB cord-293966-5c466xvz 33 27 - - HYPH cord-293966-5c466xvz 33 28 stranded strand VBN cord-293966-5c466xvz 33 29 DNA DNA NNP cord-293966-5c466xvz 33 30 [ [ -LRB- cord-293966-5c466xvz 33 31 13 13 CD cord-293966-5c466xvz 33 32 , , , cord-293966-5c466xvz 33 33 14 14 CD cord-293966-5c466xvz 33 34 ] ] -RRB- cord-293966-5c466xvz 33 35 . . . cord-293966-5c466xvz 34 1 PCR PCR NNP cord-293966-5c466xvz 34 2 products product NNS cord-293966-5c466xvz 34 3 containing contain VBG cord-293966-5c466xvz 34 4 positive positive JJ cord-293966-5c466xvz 34 5 selection selection NN cord-293966-5c466xvz 34 6 markers marker NNS cord-293966-5c466xvz 34 7 are be VBP cord-293966-5c466xvz 34 8 suitable suitable JJ cord-293966-5c466xvz 34 9 substrates substrate NNS cord-293966-5c466xvz 34 10 for for IN cord-293966-5c466xvz 34 11 these these DT cord-293966-5c466xvz 34 12 enzymes enzyme NNS cord-293966-5c466xvz 34 13 , , , cord-293966-5c466xvz 34 14 so so RB cord-293966-5c466xvz 34 15 long long RB cord-293966-5c466xvz 34 16 as as IN cord-293966-5c466xvz 34 17 they -PRON- PRP cord-293966-5c466xvz 34 18 bear bear VBP cord-293966-5c466xvz 34 19 extensions extension NNS cord-293966-5c466xvz 34 20 of of IN cord-293966-5c466xvz 34 21 40 40 CD cord-293966-5c466xvz 34 22 - - SYM cord-293966-5c466xvz 34 23 50 50 CD cord-293966-5c466xvz 34 24 bases basis NNS cord-293966-5c466xvz 34 25 that that WDT cord-293966-5c466xvz 34 26 are be VBP cord-293966-5c466xvz 34 27 homologous homologous JJ cord-293966-5c466xvz 34 28 to to IN cord-293966-5c466xvz 34 29 the the DT cord-293966-5c466xvz 34 30 target target NN cord-293966-5c466xvz 34 31 sequence sequence NN cord-293966-5c466xvz 34 32 . . . cord-293966-5c466xvz 35 1 A a DT cord-293966-5c466xvz 35 2 major major JJ cord-293966-5c466xvz 35 3 advancement advancement NN cord-293966-5c466xvz 35 4 in in IN cord-293966-5c466xvz 35 5 this this DT cord-293966-5c466xvz 35 6 technique technique NN cord-293966-5c466xvz 35 7 came come VBD cord-293966-5c466xvz 35 8 with with IN cord-293966-5c466xvz 35 9 the the DT cord-293966-5c466xvz 35 10 development development NN cord-293966-5c466xvz 35 11 of of IN cord-293966-5c466xvz 35 12 an an DT cord-293966-5c466xvz 35 13 E. E. NNP cord-293966-5c466xvz 35 14 coli coli NNS cord-293966-5c466xvz 35 15 strain strain NN cord-293966-5c466xvz 35 16 , , , cord-293966-5c466xvz 35 17 DY380 DY380 NNP cord-293966-5c466xvz 35 18 , , , cord-293966-5c466xvz 35 19 where where WRB cord-293966-5c466xvz 35 20 the the DT cord-293966-5c466xvz 35 21 Red red JJ cord-293966-5c466xvz 35 22 proteins protein NNS cord-293966-5c466xvz 35 23 were be VBD cord-293966-5c466xvz 35 24 placed place VBN cord-293966-5c466xvz 35 25 under under IN cord-293966-5c466xvz 35 26 the the DT cord-293966-5c466xvz 35 27 control control NN cord-293966-5c466xvz 35 28 of of IN cord-293966-5c466xvz 35 29 a a DT cord-293966-5c466xvz 35 30 temperature temperature NN cord-293966-5c466xvz 35 31 - - HYPH cord-293966-5c466xvz 35 32 inducible inducible JJ cord-293966-5c466xvz 35 33 promoter promoter NN cord-293966-5c466xvz 35 34 [ [ -LRB- cord-293966-5c466xvz 35 35 15 15 CD cord-293966-5c466xvz 35 36 ] ] -RRB- cord-293966-5c466xvz 35 37 . . . cord-293966-5c466xvz 36 1 Several several JJ cord-293966-5c466xvz 36 2 methods method NNS cord-293966-5c466xvz 36 3 for for IN cord-293966-5c466xvz 36 4 removing remove VBG cord-293966-5c466xvz 36 5 the the DT cord-293966-5c466xvz 36 6 positive positive JJ cord-293966-5c466xvz 36 7 selection selection NN cord-293966-5c466xvz 36 8 markers marker NNS cord-293966-5c466xvz 36 9 from from IN cord-293966-5c466xvz 36 10 the the DT cord-293966-5c466xvz 36 11 viral viral JJ cord-293966-5c466xvz 36 12 genomes genome NNS cord-293966-5c466xvz 36 13 have have VBP cord-293966-5c466xvz 36 14 been be VBN cord-293966-5c466xvz 36 15 developed develop VBN cord-293966-5c466xvz 36 16 , , , cord-293966-5c466xvz 36 17 including include VBG cord-293966-5c466xvz 36 18 flanking flank VBG cord-293966-5c466xvz 36 19 sequences sequence NNS cord-293966-5c466xvz 36 20 with with IN cord-293966-5c466xvz 36 21 FRT FRT NNP cord-293966-5c466xvz 36 22 or or CC cord-293966-5c466xvz 36 23 loxP loxP NNP cord-293966-5c466xvz 36 24 sites site NNS cord-293966-5c466xvz 36 25 [ [ -LRB- cord-293966-5c466xvz 36 26 16 16 CD cord-293966-5c466xvz 36 27 ] ] -RRB- cord-293966-5c466xvz 36 28 , , , cord-293966-5c466xvz 36 29 or or CC cord-293966-5c466xvz 36 30 utilizing utilize VBG cord-293966-5c466xvz 36 31 positive positive JJ cord-293966-5c466xvz 36 32 and and CC cord-293966-5c466xvz 36 33 negative negative JJ cord-293966-5c466xvz 36 34 selection selection NN cord-293966-5c466xvz 36 35 markers marker NNS cord-293966-5c466xvz 36 36 on on IN cord-293966-5c466xvz 36 37 a a DT cord-293966-5c466xvz 36 38 single single JJ cord-293966-5c466xvz 36 39 gene gene NN cord-293966-5c466xvz 36 40 cassette cassette NN cord-293966-5c466xvz 36 41 , , , cord-293966-5c466xvz 36 42 such such JJ cord-293966-5c466xvz 36 43 as as IN cord-293966-5c466xvz 36 44 the the DT cord-293966-5c466xvz 36 45 Galactose Galactose NNP cord-293966-5c466xvz 36 46 Kinase Kinase NNP cord-293966-5c466xvz 36 47 ( ( -LRB- cord-293966-5c466xvz 36 48 GalK)-Kan GalK)-Kan NNP cord-293966-5c466xvz 36 49 R r NN cord-293966-5c466xvz 36 50 gene gene NN cord-293966-5c466xvz 36 51 cassette cassette NN cord-293966-5c466xvz 36 52 [ [ -LRB- cord-293966-5c466xvz 36 53 17 17 CD cord-293966-5c466xvz 36 54 ] ] -RRB- cord-293966-5c466xvz 36 55 . . . cord-293966-5c466xvz 37 1 These these DT cord-293966-5c466xvz 37 2 methods method NNS cord-293966-5c466xvz 37 3 both both DT cord-293966-5c466xvz 37 4 have have VBP cord-293966-5c466xvz 37 5 certain certain JJ cord-293966-5c466xvz 37 6 downfalls downfall NNS cord-293966-5c466xvz 37 7 , , , cord-293966-5c466xvz 37 8 including include VBG cord-293966-5c466xvz 37 9 the the DT cord-293966-5c466xvz 37 10 retention retention NN cord-293966-5c466xvz 37 11 of of IN cord-293966-5c466xvz 37 12 small small JJ cord-293966-5c466xvz 37 13 FRT FRT NNP cord-293966-5c466xvz 37 14 or or CC cord-293966-5c466xvz 37 15 loxP loxP NNP cord-293966-5c466xvz 37 16 sites site NNS cord-293966-5c466xvz 37 17 following follow VBG cord-293966-5c466xvz 37 18 removal removal NN cord-293966-5c466xvz 37 19 of of IN cord-293966-5c466xvz 37 20 the the DT cord-293966-5c466xvz 37 21 marker marker NN cord-293966-5c466xvz 37 22 , , , cord-293966-5c466xvz 37 23 or or CC cord-293966-5c466xvz 37 24 the the DT cord-293966-5c466xvz 37 25 unintended unintended JJ cord-293966-5c466xvz 37 26 removal removal NN cord-293966-5c466xvz 37 27 of of IN cord-293966-5c466xvz 37 28 negative negative JJ cord-293966-5c466xvz 37 29 selection selection NN cord-293966-5c466xvz 37 30 markers marker NNS cord-293966-5c466xvz 37 31 by by IN cord-293966-5c466xvz 37 32 repeat repeat NN cord-293966-5c466xvz 37 33 sequences sequence NNS cord-293966-5c466xvz 37 34 in in IN cord-293966-5c466xvz 37 35 the the DT cord-293966-5c466xvz 37 36 BAC BAC NNP cord-293966-5c466xvz 37 37 plasmid plasmid NN cord-293966-5c466xvz 37 38 . . . cord-293966-5c466xvz 38 1 To to TO cord-293966-5c466xvz 38 2 improve improve VB cord-293966-5c466xvz 38 3 the the DT cord-293966-5c466xvz 38 4 efficiency efficiency NN cord-293966-5c466xvz 38 5 of of IN cord-293966-5c466xvz 38 6 removing remove VBG cord-293966-5c466xvz 38 7 the the DT cord-293966-5c466xvz 38 8 positive positive JJ cord-293966-5c466xvz 38 9 selection selection NN cord-293966-5c466xvz 38 10 marker marker NN cord-293966-5c466xvz 38 11 , , , cord-293966-5c466xvz 38 12 a a DT cord-293966-5c466xvz 38 13 unique unique JJ cord-293966-5c466xvz 38 14 method method NN cord-293966-5c466xvz 38 15 utilizing utilize VBG cord-293966-5c466xvz 38 16 the the DT cord-293966-5c466xvz 38 17 I I NNP cord-293966-5c466xvz 38 18 - - HYPH cord-293966-5c466xvz 38 19 SceI SceI NNP cord-293966-5c466xvz 38 20 homing homing NN cord-293966-5c466xvz 38 21 endonuclease endonuclease NN cord-293966-5c466xvz 38 22 under under IN cord-293966-5c466xvz 38 23 an an DT cord-293966-5c466xvz 38 24 arabinose arabinose JJ cord-293966-5c466xvz 38 25 - - HYPH cord-293966-5c466xvz 38 26 inducible inducible JJ cord-293966-5c466xvz 38 27 promoter promoter NN cord-293966-5c466xvz 38 28 was be VBD cord-293966-5c466xvz 38 29 developed develop VBN cord-293966-5c466xvz 38 30 ( ( -LRB- cord-293966-5c466xvz 38 31 Fig Fig NNP cord-293966-5c466xvz 38 32 . . . cord-293966-5c466xvz 38 33 1 1 CD cord-293966-5c466xvz 38 34 ) ) -RRB- cord-293966-5c466xvz 39 1 [ [ -LRB- cord-293966-5c466xvz 39 2 18 18 CD cord-293966-5c466xvz 39 3 ] ] -RRB- cord-293966-5c466xvz 39 4 . . . cord-293966-5c466xvz 40 1 I -PRON- PRP cord-293966-5c466xvz 40 2 - - HYPH cord-293966-5c466xvz 40 3 SceI SceI NNP cord-293966-5c466xvz 40 4 is be VBZ cord-293966-5c466xvz 40 5 an an DT cord-293966-5c466xvz 40 6 endonuclease endonuclease NN cord-293966-5c466xvz 40 7 with with IN cord-293966-5c466xvz 40 8 an an DT cord-293966-5c466xvz 40 9 18 18 CD cord-293966-5c466xvz 40 10 bp bp NNP cord-293966-5c466xvz 40 11 recognition recognition NN cord-293966-5c466xvz 40 12 site site NN cord-293966-5c466xvz 40 13 that that WDT cord-293966-5c466xvz 40 14 is be VBZ cord-293966-5c466xvz 40 15 not not RB cord-293966-5c466xvz 40 16 present present JJ cord-293966-5c466xvz 40 17 in in IN cord-293966-5c466xvz 40 18 the the DT cord-293966-5c466xvz 40 19 E. E. NNP cord-293966-5c466xvz 40 20 coli coli NNP cord-293966-5c466xvz 40 21 genome genome NN cord-293966-5c466xvz 40 22 , , , cord-293966-5c466xvz 40 23 making make VBG cord-293966-5c466xvz 40 24 it -PRON- PRP cord-293966-5c466xvz 40 25 safe safe JJ cord-293966-5c466xvz 40 26 to to TO cord-293966-5c466xvz 40 27 express express VB cord-293966-5c466xvz 40 28 in in IN cord-293966-5c466xvz 40 29 E. E. NNP cord-293966-5c466xvz 40 30 coli coli NNS cord-293966-5c466xvz 40 31 . . . cord-293966-5c466xvz 41 1 In in IN cord-293966-5c466xvz 41 2 the the DT cord-293966-5c466xvz 41 3 method method NN cord-293966-5c466xvz 41 4 described describe VBN cord-293966-5c466xvz 41 5 here here RB cord-293966-5c466xvz 41 6 , , , cord-293966-5c466xvz 41 7 this this DT cord-293966-5c466xvz 41 8 recognition recognition NN cord-293966-5c466xvz 41 9 site site NN cord-293966-5c466xvz 41 10 is be VBZ cord-293966-5c466xvz 41 11 engineered engineer VBN cord-293966-5c466xvz 41 12 on on IN cord-293966-5c466xvz 41 13 a a DT cord-293966-5c466xvz 41 14 plasmid plasmid NN cord-293966-5c466xvz 41 15 ( ( -LRB- cord-293966-5c466xvz 41 16 pEP pEP NNP cord-293966-5c466xvz 41 17 - - HYPH cord-293966-5c466xvz 41 18 KanS KanS NNP cord-293966-5c466xvz 41 19 ) ) -RRB- cord-293966-5c466xvz 41 20 just just RB cord-293966-5c466xvz 41 21 outside outside RB cord-293966-5c466xvz 41 22 of of IN cord-293966-5c466xvz 41 23 the the DT cord-293966-5c466xvz 41 24 positive positive JJ cord-293966-5c466xvz 41 25 selection selection NN cord-293966-5c466xvz 41 26 marker marker NN cord-293966-5c466xvz 41 27 , , , cord-293966-5c466xvz 41 28 and and CC cord-293966-5c466xvz 41 29 its -PRON- PRP$ cord-293966-5c466xvz 41 30 cleavage cleavage NN cord-293966-5c466xvz 41 31 with with IN cord-293966-5c466xvz 41 32 the the DT cord-293966-5c466xvz 41 33 I I NNP cord-293966-5c466xvz 41 34 - - HYPH cord-293966-5c466xvz 41 35 SceI SceI NNP cord-293966-5c466xvz 41 36 enzyme enzyme NN cord-293966-5c466xvz 41 37 allows allow VBZ cord-293966-5c466xvz 41 38 for for IN cord-293966-5c466xvz 41 39 the the DT cord-293966-5c466xvz 41 40 removal removal NN cord-293966-5c466xvz 41 41 of of IN cord-293966-5c466xvz 41 42 the the DT cord-293966-5c466xvz 41 43 positive positive JJ cord-293966-5c466xvz 41 44 selection selection NN cord-293966-5c466xvz 41 45 marker marker NN cord-293966-5c466xvz 41 46 by by IN cord-293966-5c466xvz 41 47 intramolecular intramolecular JJ cord-293966-5c466xvz 41 48 Red red JJ cord-293966-5c466xvz 41 49 recombination recombination NN cord-293966-5c466xvz 41 50 utilizing utilize VBG cord-293966-5c466xvz 41 51 sequence sequence NN cord-293966-5c466xvz 41 52 duplication duplication NN cord-293966-5c466xvz 41 53 introduced introduce VBN cord-293966-5c466xvz 41 54 in in IN cord-293966-5c466xvz 41 55 the the DT cord-293966-5c466xvz 41 56 original original JJ cord-293966-5c466xvz 41 57 PCR PCR NNP cord-293966-5c466xvz 41 58 primers primer NNS cord-293966-5c466xvz 41 59 . . . cord-293966-5c466xvz 42 1 This this DT cord-293966-5c466xvz 42 2 method method NN cord-293966-5c466xvz 42 3 can can MD cord-293966-5c466xvz 42 4 be be VB cord-293966-5c466xvz 42 5 utilized utilize VBN cord-293966-5c466xvz 42 6 to to TO cord-293966-5c466xvz 42 7 introduce introduce VB cord-293966-5c466xvz 42 8 any any DT cord-293966-5c466xvz 42 9 type type NN cord-293966-5c466xvz 42 10 of of IN cord-293966-5c466xvz 42 11 modification modification NN cord-293966-5c466xvz 42 12 into into IN cord-293966-5c466xvz 42 13 the the DT cord-293966-5c466xvz 42 14 BAC BAC NNP cord-293966-5c466xvz 42 15 DNA DNA NNP cord-293966-5c466xvz 42 16 , , , cord-293966-5c466xvz 42 17 including include VBG cord-293966-5c466xvz 42 18 mutations mutation NNS cord-293966-5c466xvz 42 19 , , , cord-293966-5c466xvz 42 20 deletions deletion NNS cord-293966-5c466xvz 42 21 , , , cord-293966-5c466xvz 42 22 and and CC cord-293966-5c466xvz 42 23 insertions insertion NNS cord-293966-5c466xvz 42 24 . . . cord-293966-5c466xvz 43 1 Here here RB cord-293966-5c466xvz 43 2 I -PRON- PRP cord-293966-5c466xvz 43 3 will will MD cord-293966-5c466xvz 43 4 outline outline VB cord-293966-5c466xvz 43 5 the the DT cord-293966-5c466xvz 43 6 procedure procedure NN cord-293966-5c466xvz 43 7 for for IN cord-293966-5c466xvz 43 8 this this DT cord-293966-5c466xvz 43 9 highly highly RB cord-293966-5c466xvz 43 10 efficient efficient JJ cord-293966-5c466xvz 43 11 method method NN cord-293966-5c466xvz 43 12 to to TO cord-293966-5c466xvz 43 13 engineer engineer VB cord-293966-5c466xvz 43 14 markerless markerless NN cord-293966-5c466xvz 43 15 modifications modification NNS cord-293966-5c466xvz 43 16 , , , cord-293966-5c466xvz 43 17 focusing focus VBG cord-293966-5c466xvz 43 18 on on IN cord-293966-5c466xvz 43 19 single single JJ cord-293966-5c466xvz 43 20 point point NN cord-293966-5c466xvz 43 21 mutations mutation NNS cord-293966-5c466xvz 43 22 in in IN cord-293966-5c466xvz 43 23 the the DT cord-293966-5c466xvz 43 24 full full JJ cord-293966-5c466xvz 43 25 - - HYPH cord-293966-5c466xvz 43 26 length length NN cord-293966-5c466xvz 43 27 MERS MERS NNP cord-293966-5c466xvz 43 28 - - HYPH cord-293966-5c466xvz 43 29 CoV CoV NNP cord-293966-5c466xvz 43 30 BAC BAC NNP cord-293966-5c466xvz 43 31 . . . cord-293966-5c466xvz 44 1 [ [ -LRB- cord-293966-5c466xvz 44 2 2 2 CD cord-293966-5c466xvz 44 3 ] ] -RRB- cord-293966-5c466xvz 44 4 . . . cord-293966-5c466xvz 45 1 The the DT cord-293966-5c466xvz 45 2 full full JJ cord-293966-5c466xvz 45 3 protocol protocol NN cord-293966-5c466xvz 45 4 for for IN cord-293966-5c466xvz 45 5 creating create VBG cord-293966-5c466xvz 45 6 this this DT cord-293966-5c466xvz 45 7 BAC BAC NNP cord-293966-5c466xvz 45 8 was be VBD cord-293966-5c466xvz 45 9 subsequently subsequently RB cord-293966-5c466xvz 45 10 published publish VBN cord-293966-5c466xvz 45 11 by by IN cord-293966-5c466xvz 45 12 the the DT cord-293966-5c466xvz 45 13 same same JJ cord-293966-5c466xvz 45 14 group group NN cord-293966-5c466xvz 45 15 in in IN cord-293966-5c466xvz 45 16 a a DT cord-293966-5c466xvz 45 17 previous previous JJ cord-293966-5c466xvz 45 18 Methods method NNS cord-293966-5c466xvz 45 19 in in IN cord-293966-5c466xvz 45 20 Molecular Molecular NNP cord-293966-5c466xvz 45 21 Biology Biology NNP cord-293966-5c466xvz 45 22 book book NN cord-293966-5c466xvz 45 23 [ [ -LRB- cord-293966-5c466xvz 45 24 19 19 CD cord-293966-5c466xvz 45 25 ] ] -RRB- cord-293966-5c466xvz 45 26 . . . cord-293966-5c466xvz 46 1 This this DT cord-293966-5c466xvz 46 2 plasmid plasmid NN cord-293966-5c466xvz 46 3 contains contain VBZ cord-293966-5c466xvz 46 4 the the DT cord-293966-5c466xvz 46 5 parA parA NNP cord-293966-5c466xvz 46 6 , , , cord-293966-5c466xvz 46 7 parB parb CC cord-293966-5c466xvz 46 8 , , , cord-293966-5c466xvz 46 9 and and CC cord-293966-5c466xvz 46 10 parC parc IN cord-293966-5c466xvz 46 11 genes gene NNS cord-293966-5c466xvz 46 12 derived derive VBN cord-293966-5c466xvz 46 13 from from IN cord-293966-5c466xvz 46 14 the the DT cord-293966-5c466xvz 46 15 E. E. NNP cord-293966-5c466xvz 46 16 coli coli VBZ cord-293966-5c466xvz 46 17 F F NNP cord-293966-5c466xvz 46 18 - - HYPH cord-293966-5c466xvz 46 19 factor factor NN cord-293966-5c466xvz 46 20 to to TO cord-293966-5c466xvz 46 21 prevent prevent VB cord-293966-5c466xvz 46 22 more more JJR cord-293966-5c466xvz 46 23 than than IN cord-293966-5c466xvz 46 24 one one CD cord-293966-5c466xvz 46 25 or or CC cord-293966-5c466xvz 46 26 two two CD cord-293966-5c466xvz 46 27 BACs bac NNS cord-293966-5c466xvz 46 28 from from IN cord-293966-5c466xvz 46 29 coexisting coexist VBG cord-293966-5c466xvz 46 30 in in IN cord-293966-5c466xvz 46 31 the the DT cord-293966-5c466xvz 46 32 same same JJ cord-293966-5c466xvz 46 33 cell cell NN cord-293966-5c466xvz 46 34 . . . cord-293966-5c466xvz 47 1 It -PRON- PRP cord-293966-5c466xvz 47 2 also also RB cord-293966-5c466xvz 47 3 contains contain VBZ cord-293966-5c466xvz 47 4 genes gene NNS cord-293966-5c466xvz 47 5 involved involve VBN cord-293966-5c466xvz 47 6 in in IN cord-293966-5c466xvz 47 7 the the DT cord-293966-5c466xvz 47 8 initiation initiation NN cord-293966-5c466xvz 47 9 and and CC cord-293966-5c466xvz 47 10 orientation orientation NN cord-293966-5c466xvz 47 11 of of IN cord-293966-5c466xvz 47 12 DNA dna NN cord-293966-5c466xvz 47 13 replication replication NN cord-293966-5c466xvz 47 14 and and CC cord-293966-5c466xvz 47 15 the the DT cord-293966-5c466xvz 47 16 chloramphenicol chloramphenicol NN cord-293966-5c466xvz 47 17 resistance resistance NN cord-293966-5c466xvz 47 18 gene gene NN cord-293966-5c466xvz 47 19 ( ( -LRB- cord-293966-5c466xvz 47 20 Cml Cml NNP cord-293966-5c466xvz 47 21 r r NNP cord-293966-5c466xvz 47 22 ) ) -RRB- cord-293966-5c466xvz 47 23 . . . cord-293966-5c466xvz 48 1 2 2 LS cord-293966-5c466xvz 48 2 . . . cord-293966-5c466xvz 49 1 pEP pEP NNP cord-293966-5c466xvz 49 2 - - HYPH cord-293966-5c466xvz 49 3 KanS. KanS. NNP cord-293966-5c466xvz 50 1 This this DT cord-293966-5c466xvz 50 2 plasmid plasmid NN cord-293966-5c466xvz 50 3 contains contain VBZ cord-293966-5c466xvz 50 4 the the DT cord-293966-5c466xvz 50 5 AphAI aphai NN cord-293966-5c466xvz 50 6 - - HYPH cord-293966-5c466xvz 50 7 I I NNP cord-293966-5c466xvz 50 8 - - HYPH cord-293966-5c466xvz 50 9 SceI SceI NNP cord-293966-5c466xvz 50 10 cassette cassette NN cord-293966-5c466xvz 50 11 containing contain VBG cord-293966-5c466xvz 50 12 a a DT cord-293966-5c466xvz 50 13 kanamycin kanamycin NNP cord-293966-5c466xvz 50 14 resistance resistance NN cord-293966-5c466xvz 50 15 marker marker NN cord-293966-5c466xvz 50 16 ( ( -LRB- cord-293966-5c466xvz 50 17 Kan Kan NNP cord-293966-5c466xvz 50 18 r r NNP cord-293966-5c466xvz 50 19 ) ) -RRB- cord-293966-5c466xvz 50 20 and and CC cord-293966-5c466xvz 50 21 an an DT cord-293966-5c466xvz 50 22 I I NNP cord-293966-5c466xvz 50 23 - - HYPH cord-293966-5c466xvz 50 24 SceI SceI NNP cord-293966-5c466xvz 50 25 restriction restriction NN cord-293966-5c466xvz 50 26 site site NN cord-293966-5c466xvz 50 27 [ [ -LRB- cord-293966-5c466xvz 50 28 18 18 CD cord-293966-5c466xvz 50 29 ] ] -RRB- cord-293966-5c466xvz 50 30 . . . cord-293966-5c466xvz 51 1 This this DT cord-293966-5c466xvz 51 2 plasmid plasmid NN cord-293966-5c466xvz 51 3 also also RB cord-293966-5c466xvz 51 4 contains contain VBZ cord-293966-5c466xvz 51 5 an an DT cord-293966-5c466xvz 51 6 ampicillin ampicillin JJ cord-293966-5c466xvz 51 7 resistance resistance NN cord-293966-5c466xvz 51 8 marker marker NN cord-293966-5c466xvz 51 9 . . . cord-293966-5c466xvz 52 1 3 3 LS cord-293966-5c466xvz 52 2 . . . cord-293966-5c466xvz 53 1 E. E. NNP cord-293966-5c466xvz 53 2 coli coli VBZ cord-293966-5c466xvz 53 3 strains strain NNS cord-293966-5c466xvz 53 4 DH10B dh10b JJ cord-293966-5c466xvz 53 5 ( ( -LRB- cord-293966-5c466xvz 53 6 see see VB cord-293966-5c466xvz 53 7 Note1 Note1 NNP cord-293966-5c466xvz 53 8 ) ) -RRB- cord-293966-5c466xvz 53 9 and and CC cord-293966-5c466xvz 53 10 GS1783 GS1783 NNP cord-293966-5c466xvz 53 11 ( ( -LRB- cord-293966-5c466xvz 53 12 see see VB cord-293966-5c466xvz 53 13 Note note NN cord-293966-5c466xvz 53 14 2 2 CD cord-293966-5c466xvz 53 15 ) ) -RRB- cord-293966-5c466xvz 53 16 cells cell NNS cord-293966-5c466xvz 53 17 . . . cord-293966-5c466xvz 53 18 _SP cord-293966-5c466xvz 54 1 Forward forward RB cord-293966-5c466xvz 54 2 6 6 CD cord-293966-5c466xvz 54 3 . . . cord-293966-5c466xvz 55 1 Aliquot Aliquot NNP cord-293966-5c466xvz 55 2 25 25 CD cord-293966-5c466xvz 55 3 mL ml NN cord-293966-5c466xvz 55 4 into into IN cord-293966-5c466xvz 55 5 each each DT cord-293966-5c466xvz 55 6 50 50 CD cord-293966-5c466xvz 55 7 mL ml NN cord-293966-5c466xvz 55 8 conical conical JJ cord-293966-5c466xvz 55 9 tube tube NN cord-293966-5c466xvz 55 10 on on IN cord-293966-5c466xvz 55 11 ice ice NN cord-293966-5c466xvz 55 12 . . . cord-293966-5c466xvz 56 1 Centrifuge centrifuge NN cord-293966-5c466xvz 56 2 at at IN cord-293966-5c466xvz 56 3 1800 1800 CD cord-293966-5c466xvz 56 4 Â â NN cord-293966-5c466xvz 56 5 g g NN cord-293966-5c466xvz 56 6 for for IN cord-293966-5c466xvz 56 7 10 10 CD cord-293966-5c466xvz 56 8 min min NN cord-293966-5c466xvz 56 9 at at IN cord-293966-5c466xvz 56 10 4 4 CD cord-293966-5c466xvz 56 11 C c NN cord-293966-5c466xvz 56 12 in in IN cord-293966-5c466xvz 56 13 a a DT cord-293966-5c466xvz 56 14 tabletop tabletop NN cord-293966-5c466xvz 56 15 centrifuge centrifuge NN cord-293966-5c466xvz 56 16 . . . cord-293966-5c466xvz 57 1 7 7 CD cord-293966-5c466xvz 57 2 . . . cord-293966-5c466xvz 58 1 Pour pour VB cord-293966-5c466xvz 58 2 off off RP cord-293966-5c466xvz 58 3 supernatant supernatant JJ cord-293966-5c466xvz 58 4 with with IN cord-293966-5c466xvz 58 5 one one CD cord-293966-5c466xvz 58 6 quick quick JJ cord-293966-5c466xvz 58 7 motion motion NN cord-293966-5c466xvz 58 8 . . . cord-293966-5c466xvz 59 1 While while IN cord-293966-5c466xvz 59 2 pouring pour VBG cord-293966-5c466xvz 59 3 , , , cord-293966-5c466xvz 59 4 position position VB cord-293966-5c466xvz 59 5 the the DT cord-293966-5c466xvz 59 6 bacterial bacterial JJ cord-293966-5c466xvz 59 7 pellet pellet NN cord-293966-5c466xvz 59 8 away away RB cord-293966-5c466xvz 59 9 from from IN cord-293966-5c466xvz 59 10 the the DT cord-293966-5c466xvz 59 11 liquid liquid NN cord-293966-5c466xvz 59 12 to to TO cord-293966-5c466xvz 59 13 limit limit VB cord-293966-5c466xvz 59 14 the the DT cord-293966-5c466xvz 59 15 amount amount NN cord-293966-5c466xvz 59 16 of of IN cord-293966-5c466xvz 59 17 bacteria bacteria NNS cord-293966-5c466xvz 59 18 lost lose VBN cord-293966-5c466xvz 59 19 . . . cord-293966-5c466xvz 60 1 Add add VB cord-293966-5c466xvz 60 2 5 5 CD cord-293966-5c466xvz 60 3 mL ml NN cord-293966-5c466xvz 60 4 ice ice NN cord-293966-5c466xvz 60 5 - - HYPH cord-293966-5c466xvz 60 6 cold cold NN cord-293966-5c466xvz 60 7 sterile sterile JJ cord-293966-5c466xvz 60 8 ddH ddh JJ cord-293966-5c466xvz 60 9 2 2 CD cord-293966-5c466xvz 60 10 O o NN cord-293966-5c466xvz 60 11 and and CC cord-293966-5c466xvz 60 12 resuspend resuspend VB cord-293966-5c466xvz 60 13 pellet pellet NN cord-293966-5c466xvz 60 14 by by IN cord-293966-5c466xvz 60 15 swirling swirl VBG cord-293966-5c466xvz 60 16 and and CC cord-293966-5c466xvz 60 17 tapping tap VBG cord-293966-5c466xvz 60 18 the the DT cord-293966-5c466xvz 60 19 tube tube NN cord-293966-5c466xvz 60 20 to to IN cord-293966-5c466xvz 60 21 the the DT cord-293966-5c466xvz 60 22 bottom bottom NN cord-293966-5c466xvz 60 23 of of IN cord-293966-5c466xvz 60 24 the the DT cord-293966-5c466xvz 60 25 ice ice NN cord-293966-5c466xvz 60 26 - - HYPH cord-293966-5c466xvz 60 27 cold cold JJ cord-293966-5c466xvz 60 28 autoclave autoclave NN cord-293966-5c466xvz 60 29 bin bin NNP cord-293966-5c466xvz 60 30 . . . cord-293966-5c466xvz 61 1 Once once RB cord-293966-5c466xvz 61 2 resuspended resuspend VBN cord-293966-5c466xvz 61 3 , , , cord-293966-5c466xvz 61 4 add add VB cord-293966-5c466xvz 61 5 an an DT cord-293966-5c466xvz 61 6 additional additional JJ cord-293966-5c466xvz 61 7 20 20 CD cord-293966-5c466xvz 61 8 mL ml NN cord-293966-5c466xvz 61 9 ice ice NN cord-293966-5c466xvz 61 10 - - HYPH cord-293966-5c466xvz 61 11 cold cold NN cord-293966-5c466xvz 61 12 sterile sterile JJ cord-293966-5c466xvz 61 13 ddH ddh JJ cord-293966-5c466xvz 61 14 2 2 CD cord-293966-5c466xvz 61 15 O o NN cord-293966-5c466xvz 61 16 and and CC cord-293966-5c466xvz 61 17 centrifuge centrifuge NN cord-293966-5c466xvz 61 18 at at IN cord-293966-5c466xvz 61 19 1800 1800 CD cord-293966-5c466xvz 61 20 Â â NN cord-293966-5c466xvz 61 21 g g NN cord-293966-5c466xvz 61 22 for for IN cord-293966-5c466xvz 61 23 10 10 CD cord-293966-5c466xvz 61 24 min min NN cord-293966-5c466xvz 61 25 at at IN cord-293966-5c466xvz 61 26 4 4 CD cord-293966-5c466xvz 61 27 C. C. NNP cord-293966-5c466xvz 61 28 Repeat Repeat NNP cord-293966-5c466xvz 61 29 1Â. 1â. CD cord-293966-5c466xvz 61 30 8 8 CD cord-293966-5c466xvz 61 31 . . . cord-293966-5c466xvz 62 1 Following follow VBG cord-293966-5c466xvz 62 2 the the DT cord-293966-5c466xvz 62 3 second second JJ cord-293966-5c466xvz 62 4 water water NN cord-293966-5c466xvz 62 5 wash wash NN cord-293966-5c466xvz 62 6 , , , cord-293966-5c466xvz 62 7 resuspend resuspend VB cord-293966-5c466xvz 62 8 each each DT cord-293966-5c466xvz 62 9 pellet pellet NN cord-293966-5c466xvz 62 10 with with IN cord-293966-5c466xvz 62 11 10 10 CD cord-293966-5c466xvz 62 12 % % NN cord-293966-5c466xvz 62 13 glycerol glycerol NN cord-293966-5c466xvz 62 14 , , , cord-293966-5c466xvz 62 15 first first RB cord-293966-5c466xvz 62 16 in in IN cord-293966-5c466xvz 62 17 5 5 CD cord-293966-5c466xvz 62 18 mL ml NN cord-293966-5c466xvz 62 19 , , , cord-293966-5c466xvz 62 20 then then RB cord-293966-5c466xvz 62 21 add add VB cord-293966-5c466xvz 62 22 an an DT cord-293966-5c466xvz 62 23 additional additional JJ cord-293966-5c466xvz 62 24 15 15 CD cord-293966-5c466xvz 62 25 mL. mL. NNS cord-293966-5c466xvz 62 26 Centrifuge Centrifuge NNP cord-293966-5c466xvz 62 27 at at IN cord-293966-5c466xvz 62 28 1800 1800 CD cord-293966-5c466xvz 62 29 Â â NN cord-293966-5c466xvz 62 30 g g NN cord-293966-5c466xvz 62 31 for for IN cord-293966-5c466xvz 62 32 10 10 CD cord-293966-5c466xvz 62 33 min min NN cord-293966-5c466xvz 62 34 at at IN cord-293966-5c466xvz 62 35 4 4 CD cord-293966-5c466xvz 62 36 C. C. NNP cord-293966-5c466xvz 62 37 9 9 CD cord-293966-5c466xvz 62 38 . . . cord-293966-5c466xvz 63 1 Pour pour VB cord-293966-5c466xvz 63 2 off off RP cord-293966-5c466xvz 63 3 supernatant supernatant JJ cord-293966-5c466xvz 63 4 as as IN cord-293966-5c466xvz 63 5 described describe VBN cord-293966-5c466xvz 63 6 above above RB cord-293966-5c466xvz 63 7 . . . cord-293966-5c466xvz 64 1 Following follow VBG cord-293966-5c466xvz 64 2 the the DT cord-293966-5c466xvz 64 3 pour pour NN cord-293966-5c466xvz 64 4 , , , cord-293966-5c466xvz 64 5 resuspend resuspend VB cord-293966-5c466xvz 64 6 the the DT cord-293966-5c466xvz 64 7 pellet pellet NN cord-293966-5c466xvz 64 8 in in IN cord-293966-5c466xvz 64 9 the the DT cord-293966-5c466xvz 64 10 remaining remain VBG cord-293966-5c466xvz 64 11 10 10 CD cord-293966-5c466xvz 64 12 % % NN cord-293966-5c466xvz 64 13 glycerol glycerol NN cord-293966-5c466xvz 64 14 ( ( -LRB- cord-293966-5c466xvz 64 15 ~500 ~500 NNP cord-293966-5c466xvz 64 16 μL μl ADD cord-293966-5c466xvz 64 17 ) ) -RRB- cord-293966-5c466xvz 64 18 . . . cord-293966-5c466xvz 65 1 If if IN cord-293966-5c466xvz 65 2 the the DT cord-293966-5c466xvz 65 3 combined combined JJ cord-293966-5c466xvz 65 4 amount amount NN cord-293966-5c466xvz 65 5 of of IN cord-293966-5c466xvz 65 6 cells cell NNS cord-293966-5c466xvz 65 7 and and CC cord-293966-5c466xvz 65 8 10 10 CD cord-293966-5c466xvz 65 9 % % NN cord-293966-5c466xvz 65 10 glycerol glycerol NN cord-293966-5c466xvz 65 11 is be VBZ cord-293966-5c466xvz 65 12 greater great JJR cord-293966-5c466xvz 65 13 than than IN cord-293966-5c466xvz 65 14 550 550 CD cord-293966-5c466xvz 65 15 μL μL NNS cord-293966-5c466xvz 65 16 , , , cord-293966-5c466xvz 65 17 transfer transfer VB cord-293966-5c466xvz 65 18 the the DT cord-293966-5c466xvz 65 19 suspension suspension NN cord-293966-5c466xvz 65 20 to to IN cord-293966-5c466xvz 65 21 a a DT cord-293966-5c466xvz 65 22 cold cold JJ cord-293966-5c466xvz 65 23 Eppendorf eppendorf NN cord-293966-5c466xvz 65 24 tube tube NN cord-293966-5c466xvz 65 25 and and CC cord-293966-5c466xvz 65 26 pellet pellet NN cord-293966-5c466xvz 65 27 the the DT cord-293966-5c466xvz 65 28 cells cell NNS cord-293966-5c466xvz 65 29 for for IN cord-293966-5c466xvz 65 30 2 2 CD cord-293966-5c466xvz 65 31 min min NN cord-293966-5c466xvz 65 32 at at IN cord-293966-5c466xvz 65 33 5000 5000 CD cord-293966-5c466xvz 65 34 Â â NN cord-293966-5c466xvz 65 35 g g NN cord-293966-5c466xvz 65 36 and and CC cord-293966-5c466xvz 65 37 4 4 CD cord-293966-5c466xvz 65 38 C. C. NNP cord-293966-5c466xvz 65 39 After after IN cord-293966-5c466xvz 65 40 spinning spin VBG cord-293966-5c466xvz 65 41 the the DT cord-293966-5c466xvz 65 42 cells cell NNS cord-293966-5c466xvz 65 43 , , , cord-293966-5c466xvz 65 44 remove remove VB cord-293966-5c466xvz 65 45 an an DT cord-293966-5c466xvz 65 46 appropriate appropriate JJ cord-293966-5c466xvz 65 47 amount amount NN cord-293966-5c466xvz 65 48 of of IN cord-293966-5c466xvz 65 49 supernatant supernatant JJ cord-293966-5c466xvz 65 50 such such JJ cord-293966-5c466xvz 65 51 that~500 that~500 NNP cord-293966-5c466xvz 65 52 μL μL NFP cord-293966-5c466xvz 65 53 of of IN cord-293966-5c466xvz 65 54 cell cell NN cord-293966-5c466xvz 65 55 suspension suspension NN cord-293966-5c466xvz 65 56 remains remain VBZ cord-293966-5c466xvz 65 57 . . . cord-293966-5c466xvz 66 1 Resuspend resuspend VB cord-293966-5c466xvz 66 2 the the DT cord-293966-5c466xvz 66 3 cells cell NNS cord-293966-5c466xvz 66 4 to to IN cord-293966-5c466xvz 66 5 a a DT cord-293966-5c466xvz 66 6 homogenous homogenous JJ cord-293966-5c466xvz 66 7 solution solution NN cord-293966-5c466xvz 66 8 and and CC cord-293966-5c466xvz 66 9 aliquot aliquot VBD cord-293966-5c466xvz 66 10 50 50 CD cord-293966-5c466xvz 67 1 μL μL . cord-293966-5c466xvz 68 1 to to TO cord-293966-5c466xvz 68 2 prefrozen prefrozen VB cord-293966-5c466xvz 68 3 Eppendorf Eppendorf NNP cord-293966-5c466xvz 68 4 tubes tube NNS cord-293966-5c466xvz 68 5 and and CC cord-293966-5c466xvz 68 6 flash flash NN cord-293966-5c466xvz 68 7 - - HYPH cord-293966-5c466xvz 68 8 freeze freeze NN cord-293966-5c466xvz 68 9 tubes tube NNS cord-293966-5c466xvz 68 10 in in IN cord-293966-5c466xvz 68 11 liquid liquid JJ cord-293966-5c466xvz 68 12 nitrogen nitrogen NN cord-293966-5c466xvz 68 13 or or CC cord-293966-5c466xvz 68 14 a a DT cord-293966-5c466xvz 68 15 dry dry JJ cord-293966-5c466xvz 68 16 ice ice NN cord-293966-5c466xvz 68 17 - - HYPH cord-293966-5c466xvz 68 18 methanol methanol NN cord-293966-5c466xvz 68 19 bath bath NN cord-293966-5c466xvz 68 20 . . . cord-293966-5c466xvz 69 1 Use use VB cord-293966-5c466xvz 69 2 immediately immediately RB cord-293966-5c466xvz 69 3 or or CC cord-293966-5c466xvz 69 4 store store VB cord-293966-5c466xvz 69 5 at at IN cord-293966-5c466xvz 69 6 À80 À80 NNP cord-293966-5c466xvz 69 7 C. C. NNP cord-293966-5c466xvz 69 8 Cells Cells NNP cord-293966-5c466xvz 69 9 are be VBP cord-293966-5c466xvz 69 10 typically typically RB cord-293966-5c466xvz 69 11 good good JJ cord-293966-5c466xvz 69 12 for for IN cord-293966-5c466xvz 69 13 6 6 CD cord-293966-5c466xvz 69 14 - - SYM cord-293966-5c466xvz 69 15 12 12 CD cord-293966-5c466xvz 69 16 months month NNS cord-293966-5c466xvz 69 17 , , , cord-293966-5c466xvz 69 18 but but CC cord-293966-5c466xvz 69 19 may may MD cord-293966-5c466xvz 69 20 be be VB cord-293966-5c466xvz 69 21 useful useful JJ cord-293966-5c466xvz 69 22 even even RB cord-293966-5c466xvz 69 23 after after IN cord-293966-5c466xvz 69 24 several several JJ cord-293966-5c466xvz 69 25 years year NNS cord-293966-5c466xvz 69 26 . . . cord-293966-5c466xvz 69 27 _SP cord-293966-5c466xvz 70 1 Kan Kan NNP cord-293966-5c466xvz 70 2 r r NNP cord-293966-5c466xvz 70 3 -I -I NNP cord-293966-5c466xvz 70 4 - - HYPH cord-293966-5c466xvz 70 5 SceI SceI NNP cord-293966-5c466xvz 70 6 primers primer NNS cord-293966-5c466xvz 70 7 with with IN cord-293966-5c466xvz 70 8 60 60 CD cord-293966-5c466xvz 70 9 bp bp NNP cord-293966-5c466xvz 70 10 homology homology NN cord-293966-5c466xvz 70 11 to to IN cord-293966-5c466xvz 70 12 the the DT cord-293966-5c466xvz 70 13 region region NN cord-293966-5c466xvz 70 14 of of IN cord-293966-5c466xvz 70 15 interest interest NN cord-293966-5c466xvz 70 16 flanking flank VBG cord-293966-5c466xvz 70 17 the the DT cord-293966-5c466xvz 70 18 desired desire VBN cord-293966-5c466xvz 70 19 site site NN cord-293966-5c466xvz 70 20 to to TO cord-293966-5c466xvz 70 21 be be VB cord-293966-5c466xvz 70 22 modified modify VBN cord-293966-5c466xvz 70 23 ( ( -LRB- cord-293966-5c466xvz 70 24 Fig Fig NNP cord-293966-5c466xvz 70 25 . . . cord-293966-5c466xvz 70 26 1a 1a CD cord-293966-5c466xvz 70 27 ) ) -RRB- cord-293966-5c466xvz 70 28 . . . cord-293966-5c466xvz 71 1 To to TO cord-293966-5c466xvz 71 2 design design VB cord-293966-5c466xvz 71 3 simple simple JJ cord-293966-5c466xvz 71 4 point point NN cord-293966-5c466xvz 71 5 mutations mutation NNS cord-293966-5c466xvz 71 6 , , , cord-293966-5c466xvz 71 7 start start VBP cord-293966-5c466xvz 71 8 by by IN cord-293966-5c466xvz 71 9 developing develop VBG cord-293966-5c466xvz 71 10 a a DT cord-293966-5c466xvz 71 11 60 60 CD cord-293966-5c466xvz 71 12 bp bp NNP cord-293966-5c466xvz 71 13 flanking flanking NN cord-293966-5c466xvz 71 14 sequence sequence NN cord-293966-5c466xvz 71 15 , , , cord-293966-5c466xvz 71 16 calling call VBG cord-293966-5c466xvz 71 17 each each DT cord-293966-5c466xvz 71 18 20 20 CD cord-293966-5c466xvz 71 19 base base NN cord-293966-5c466xvz 71 20 pair pair NN cord-293966-5c466xvz 71 21 section section NN cord-293966-5c466xvz 71 22 as as IN cord-293966-5c466xvz 71 23 A A NNP cord-293966-5c466xvz 71 24 , , , cord-293966-5c466xvz 71 25 B b NN cord-293966-5c466xvz 71 26 , , , cord-293966-5c466xvz 71 27 and and CC cord-293966-5c466xvz 71 28 C. C. NNP cord-293966-5c466xvz 72 1 Then then RB cord-293966-5c466xvz 72 2 incorporate incorporate VB cord-293966-5c466xvz 72 3 the the DT cord-293966-5c466xvz 72 4 desired desire VBN cord-293966-5c466xvz 72 5 mutation mutation NN cord-293966-5c466xvz 72 6 at at IN cord-293966-5c466xvz 72 7 the the DT cord-293966-5c466xvz 72 8 end end NN cord-293966-5c466xvz 72 9 of of IN cord-293966-5c466xvz 72 10 section section NN cord-293966-5c466xvz 72 11 B b NN cord-293966-5c466xvz 72 12 ( ( -LRB- cord-293966-5c466xvz 72 13 40th 40th JJ cord-293966-5c466xvz 72 14 base base NN cord-293966-5c466xvz 72 15 pair pair NN cord-293966-5c466xvz 72 16 , , , cord-293966-5c466xvz 72 17 or or CC cord-293966-5c466xvz 72 18 the the DT cord-293966-5c466xvz 72 19 39th 39th JJ cord-293966-5c466xvz 72 20 and and CC cord-293966-5c466xvz 72 21 40th 40th JJ cord-293966-5c466xvz 72 22 base base NN cord-293966-5c466xvz 72 23 pair pair NN cord-293966-5c466xvz 72 24 if if IN cord-293966-5c466xvz 72 25 two two CD cord-293966-5c466xvz 72 26 changes change NNS cord-293966-5c466xvz 72 27 are be VBP cord-293966-5c466xvz 72 28 required require VBN cord-293966-5c466xvz 72 29 ) ) -RRB- cord-293966-5c466xvz 72 30 . . . cord-293966-5c466xvz 73 1 Finally finally RB cord-293966-5c466xvz 73 2 , , , cord-293966-5c466xvz 73 3 attach attach VB cord-293966-5c466xvz 73 4 this this DT cord-293966-5c466xvz 73 5 sequence sequence NN cord-293966-5c466xvz 73 6 to to IN cord-293966-5c466xvz 73 7 the the DT cord-293966-5c466xvz 73 8 22 22 CD cord-293966-5c466xvz 73 9 bp bp NNP cord-293966-5c466xvz 73 10 Kan Kan NNP cord-293966-5c466xvz 73 11 r r NNP cord-293966-5c466xvz 73 12 -I -I NNP cord-293966-5c466xvz 73 13 - - HYPH cord-293966-5c466xvz 73 14 SceI SceI NNP cord-293966-5c466xvz 73 15 sequence sequence NN cord-293966-5c466xvz 73 16 below below RB cord-293966-5c466xvz 73 17 to to TO cord-293966-5c466xvz 73 18 create create VB cord-293966-5c466xvz 73 19 your -PRON- PRP$ cord-293966-5c466xvz 73 20 forward forward JJ cord-293966-5c466xvz 73 21 recombination recombination NN cord-293966-5c466xvz 73 22 primer primer NN cord-293966-5c466xvz 73 23 . . . cord-293966-5c466xvz 74 1 To to TO cord-293966-5c466xvz 74 2 create create VB cord-293966-5c466xvz 74 3 the the DT cord-293966-5c466xvz 74 4 reverse reverse JJ cord-293966-5c466xvz 74 5 recombination recombination NN cord-293966-5c466xvz 74 6 primer primer NN cord-293966-5c466xvz 74 7 , , , cord-293966-5c466xvz 74 8 create create VB cord-293966-5c466xvz 74 9 a a DT cord-293966-5c466xvz 74 10 new new JJ cord-293966-5c466xvz 74 11 block block NN cord-293966-5c466xvz 74 12 of of IN cord-293966-5c466xvz 74 13 20 20 CD cord-293966-5c466xvz 74 14 bp bp NN cord-293966-5c466xvz 74 15 we -PRON- PRP cord-293966-5c466xvz 74 16 will will MD cord-293966-5c466xvz 74 17 call call VB cord-293966-5c466xvz 74 18 section section NN cord-293966-5c466xvz 74 19 D d NN cord-293966-5c466xvz 74 20 0 0 NFP cord-293966-5c466xvz 74 21 that that WDT cord-293966-5c466xvz 74 22 is be VBZ cord-293966-5c466xvz 74 23 the the DT cord-293966-5c466xvz 74 24 reverse reverse JJ cord-293966-5c466xvz 74 25 complement complement NN cord-293966-5c466xvz 74 26 of of IN cord-293966-5c466xvz 74 27 the the DT cord-293966-5c466xvz 74 28 sequence sequence NN cord-293966-5c466xvz 74 29 immediately immediately RB cord-293966-5c466xvz 74 30 downstream downstream RB cord-293966-5c466xvz 74 31 from from IN cord-293966-5c466xvz 74 32 section section NN cord-293966-5c466xvz 74 33 C. c. NN cord-293966-5c466xvz 75 1 These these DT cord-293966-5c466xvz 75 2 20 20 CD cord-293966-5c466xvz 75 3 bp bp NNP cord-293966-5c466xvz 75 4 will will MD cord-293966-5c466xvz 75 5 be be VB cord-293966-5c466xvz 75 6 followed follow VBN cord-293966-5c466xvz 75 7 on on IN cord-293966-5c466xvz 75 8 your -PRON- PRP$ cord-293966-5c466xvz 75 9 primer primer NN cord-293966-5c466xvz 75 10 by by IN cord-293966-5c466xvz 75 11 sections section NNS cord-293966-5c466xvz 75 12 C C NNP cord-293966-5c466xvz 75 13 0 0 CD cord-293966-5c466xvz 75 14 and and CC cord-293966-5c466xvz 75 15 B B NNP cord-293966-5c466xvz 75 16 0 0 CD cord-293966-5c466xvz 75 17 , , , cord-293966-5c466xvz 75 18 the the DT cord-293966-5c466xvz 75 19 reverse reverse NN cord-293966-5c466xvz 75 20 complements complement VBZ cord-293966-5c466xvz 75 21 to to IN cord-293966-5c466xvz 75 22 sections section NNS cord-293966-5c466xvz 75 23 B b NN cord-293966-5c466xvz 75 24 and and CC cord-293966-5c466xvz 75 25 C C NNP cord-293966-5c466xvz 75 26 , , , cord-293966-5c466xvz 75 27 with with IN cord-293966-5c466xvz 75 28 B b NN cord-293966-5c466xvz 75 29 0 0 CD cord-293966-5c466xvz 75 30 containing contain VBG cord-293966-5c466xvz 75 31 the the DT cord-293966-5c466xvz 75 32 desired desire VBN cord-293966-5c466xvz 75 33 mutations mutation NNS cord-293966-5c466xvz 75 34 . . . cord-293966-5c466xvz 76 1 Finally finally RB cord-293966-5c466xvz 76 2 , , , cord-293966-5c466xvz 76 3 add add VB cord-293966-5c466xvz 76 4 the the DT cord-293966-5c466xvz 76 5 23 23 CD cord-293966-5c466xvz 76 6 bp bp NNP cord-293966-5c466xvz 76 7 Kan Kan NNP cord-293966-5c466xvz 76 8 r r NNP cord-293966-5c466xvz 76 9 -I -I NNP cord-293966-5c466xvz 76 10 - - HYPH cord-293966-5c466xvz 76 11 SceI SceI NNP cord-293966-5c466xvz 76 12 sequence sequence NN cord-293966-5c466xvz 76 13 to to TO cord-293966-5c466xvz 76 14 finish finish VB cord-293966-5c466xvz 76 15 the the DT cord-293966-5c466xvz 76 16 reverse reverse JJ cord-293966-5c466xvz 76 17 primer primer NN cord-293966-5c466xvz 76 18 . . . cord-293966-5c466xvz 77 1 During during IN cord-293966-5c466xvz 77 2 negative negative JJ cord-293966-5c466xvz 77 3 selection selection NN cord-293966-5c466xvz 77 4 , , , cord-293966-5c466xvz 77 5 sections section NNS cord-293966-5c466xvz 77 6 B B NNP cord-293966-5c466xvz 77 7 / / SYM cord-293966-5c466xvz 77 8 C C NNP cord-293966-5c466xvz 77 9 will will MD cord-293966-5c466xvz 77 10 recombine recombine VB cord-293966-5c466xvz 77 11 with with IN cord-293966-5c466xvz 77 12 B b NN cord-293966-5c466xvz 77 13 0 0 CD cord-293966-5c466xvz 77 14 /C /c SYM cord-293966-5c466xvz 77 15 0 0 CD cord-293966-5c466xvz 77 16 leading lead VBG cord-293966-5c466xvz 77 17 to to IN cord-293966-5c466xvz 77 18 the the DT cord-293966-5c466xvz 77 19 loss loss NN cord-293966-5c466xvz 77 20 of of IN cord-293966-5c466xvz 77 21 the the DT cord-293966-5c466xvz 77 22 Kan Kan NNP cord-293966-5c466xvz 77 23 R R NNP cord-293966-5c466xvz 77 24 -I -I NNP cord-293966-5c466xvz 77 25 - - HYPH cord-293966-5c466xvz 77 26 SceI SceI NNP cord-293966-5c466xvz 77 27 cassette cassette NN cord-293966-5c466xvz 77 28 ( ( -LRB- cord-293966-5c466xvz 77 29 Fig Fig NNP cord-293966-5c466xvz 77 30 . . . cord-293966-5c466xvz 77 31 1 1 CD cord-293966-5c466xvz 77 32 g g NN cord-293966-5c466xvz 77 33 ) ) -RRB- cord-293966-5c466xvz 77 34 . . . cord-293966-5c466xvz 78 1 For for IN cord-293966-5c466xvz 78 2 deletion deletion NN cord-293966-5c466xvz 78 3 mutants mutant NNS cord-293966-5c466xvz 78 4 , , , cord-293966-5c466xvz 78 5 leave leave VB cord-293966-5c466xvz 78 6 out out RP cord-293966-5c466xvz 78 7 the the DT cord-293966-5c466xvz 78 8 desired desire VBN cord-293966-5c466xvz 78 9 sequence sequence NN cord-293966-5c466xvz 78 10 from from IN cord-293966-5c466xvz 78 11 your -PRON- PRP$ cord-293966-5c466xvz 78 12 primers primer NNS cord-293966-5c466xvz 78 13 . . . cord-293966-5c466xvz 79 1 For for IN cord-293966-5c466xvz 79 2 instance instance NN cord-293966-5c466xvz 79 3 , , , cord-293966-5c466xvz 79 4 to to TO cord-293966-5c466xvz 79 5 delete delete VB cord-293966-5c466xvz 79 6 sections section NNS cord-293966-5c466xvz 79 7 D d NN cord-293966-5c466xvz 79 8 / / SYM cord-293966-5c466xvz 79 9 E e NN cord-293966-5c466xvz 79 10 / / SYM cord-293966-5c466xvz 79 11 F F NNP cord-293966-5c466xvz 79 12 , , , cord-293966-5c466xvz 79 13 simply simply RB cord-293966-5c466xvz 79 14 create create VB cord-293966-5c466xvz 79 15 the the DT cord-293966-5c466xvz 79 16 forward forward JJ cord-293966-5c466xvz 79 17 primer primer NN cord-293966-5c466xvz 79 18 with with IN cord-293966-5c466xvz 79 19 sections section NNS cord-293966-5c466xvz 79 20 A a DT cord-293966-5c466xvz 79 21 / / SYM cord-293966-5c466xvz 79 22 B/ B/ NNP cord-293966-5c466xvz 79 23 C C NNP cord-293966-5c466xvz 79 24 , , , cord-293966-5c466xvz 79 25 and and CC cord-293966-5c466xvz 79 26 the the DT cord-293966-5c466xvz 79 27 reverse reverse JJ cord-293966-5c466xvz 79 28 primer primer NN cord-293966-5c466xvz 79 29 with with IN cord-293966-5c466xvz 79 30 sections section NNS cord-293966-5c466xvz 79 31 G g NN cord-293966-5c466xvz 79 32 0 0 CD cord-293966-5c466xvz 79 33 /C /c NN cord-293966-5c466xvz 79 34 0 0 CD cord-293966-5c466xvz 79 35 /B /b NN cord-293966-5c466xvz 79 36 0 0 NFP cord-293966-5c466xvz 79 37 . . . cord-293966-5c466xvz 80 1 Insertions insertion NNS cord-293966-5c466xvz 80 2 of of IN cord-293966-5c466xvz 80 3 small small JJ cord-293966-5c466xvz 80 4 sequences sequence NNS cord-293966-5c466xvz 80 5 can can MD cord-293966-5c466xvz 80 6 be be VB cord-293966-5c466xvz 80 7 achieved achieve VBN cord-293966-5c466xvz 80 8 by by IN cord-293966-5c466xvz 80 9 adding add VBG cord-293966-5c466xvz 80 10 the the DT cord-293966-5c466xvz 80 11 entire entire JJ cord-293966-5c466xvz 80 12 insertion insertion NN cord-293966-5c466xvz 80 13 sequence sequence NN cord-293966-5c466xvz 80 14 at at IN cord-293966-5c466xvz 80 15 the the DT cord-293966-5c466xvz 80 16 3 3 CD cord-293966-5c466xvz 80 17 0 0 CD cord-293966-5c466xvz 80 18 end end NN cord-293966-5c466xvz 80 19 of of IN cord-293966-5c466xvz 80 20 the the DT cord-293966-5c466xvz 80 21 forward forward JJ cord-293966-5c466xvz 80 22 primer primer NN cord-293966-5c466xvz 80 23 , , , cord-293966-5c466xvz 80 24 and and CC cord-293966-5c466xvz 80 25 at at RB cord-293966-5c466xvz 80 26 least least JJS cord-293966-5c466xvz 80 27 50 50 CD cord-293966-5c466xvz 80 28 bp bp NNS cord-293966-5c466xvz 80 29 of of IN cord-293966-5c466xvz 80 30 reverse reverse JJ cord-293966-5c466xvz 80 31 complement complement NN cord-293966-5c466xvz 80 32 sequence sequence NN cord-293966-5c466xvz 80 33 at at IN cord-293966-5c466xvz 80 34 the the DT cord-293966-5c466xvz 80 35 3 3 CD cord-293966-5c466xvz 80 36 0 0 CD cord-293966-5c466xvz 80 37 end end NN cord-293966-5c466xvz 80 38 of of IN cord-293966-5c466xvz 80 39 the the DT cord-293966-5c466xvz 80 40 reverse reverse JJ cord-293966-5c466xvz 80 41 primer primer NN cord-293966-5c466xvz 80 42 ( ( -LRB- cord-293966-5c466xvz 80 43 Fig fig NN cord-293966-5c466xvz 80 44 . . NNP cord-293966-5c466xvz 80 45 2 2 CD cord-293966-5c466xvz 80 46 ) ) -RRB- cord-293966-5c466xvz 80 47 . . . cord-293966-5c466xvz 81 1 Larger large JJR cord-293966-5c466xvz 81 2 insertions insertion NNS cord-293966-5c466xvz 81 3 may may MD cord-293966-5c466xvz 81 4 require require VB cord-293966-5c466xvz 81 5 the the DT cord-293966-5c466xvz 81 6 development development NN cord-293966-5c466xvz 81 7 of of IN cord-293966-5c466xvz 81 8 a a DT cord-293966-5c466xvz 81 9 full full JJ cord-293966-5c466xvz 81 10 plasmid plasmid NN cord-293966-5c466xvz 81 11 , , , cord-293966-5c466xvz 81 12 or or CC cord-293966-5c466xvz 81 13 potentially potentially RB cord-293966-5c466xvz 81 14 the the DT cord-293966-5c466xvz 81 15 use use NN cord-293966-5c466xvz 81 16 of of IN cord-293966-5c466xvz 81 17 nested nested JJ cord-293966-5c466xvz 81 18 PCRs pcr NNS cord-293966-5c466xvz 81 19 . . . cord-293966-5c466xvz 82 1 For for IN cord-293966-5c466xvz 82 2 additional additional JJ cord-293966-5c466xvz 82 3 details detail NNS cord-293966-5c466xvz 82 4 , , , cord-293966-5c466xvz 82 5 see see VB cord-293966-5c466xvz 82 6 ref ref NN cord-293966-5c466xvz 82 7 . . . cord-293966-5c466xvz 83 1 [ [ -LRB- cord-293966-5c466xvz 83 2 18 18 CD cord-293966-5c466xvz 83 3 ] ] -RRB- cord-293966-5c466xvz 83 4 . . . cord-293966-5c466xvz 84 1 While while IN cord-293966-5c466xvz 84 2 designing design VBG cord-293966-5c466xvz 84 3 recombination recombination NN cord-293966-5c466xvz 84 4 primers primer NNS cord-293966-5c466xvz 84 5 ( ( -LRB- cord-293966-5c466xvz 84 6 indicated indicate VBN cord-293966-5c466xvz 84 7 below below IN cord-293966-5c466xvz 84 8 ) ) -RRB- cord-293966-5c466xvz 84 9 , , , cord-293966-5c466xvz 84 10 remember remember VB cord-293966-5c466xvz 84 11 to to TO cord-293966-5c466xvz 84 12 also also RB cord-293966-5c466xvz 84 13 order order VB cord-293966-5c466xvz 84 14 short short JJ cord-293966-5c466xvz 84 15 primers primer NNS cord-293966-5c466xvz 84 16 about about RB cord-293966-5c466xvz 84 17 100 100 CD cord-293966-5c466xvz 84 18 - - SYM cord-293966-5c466xvz 84 19 200 200 CD cord-293966-5c466xvz 84 20 bp bp NNP cord-293966-5c466xvz 84 21 outside outside IN cord-293966-5c466xvz 84 22 of of IN cord-293966-5c466xvz 84 23 the the DT cord-293966-5c466xvz 84 24 insertion insertion NN cord-293966-5c466xvz 84 25 site site NN cord-293966-5c466xvz 84 26 to to TO cord-293966-5c466xvz 84 27 check check VB cord-293966-5c466xvz 84 28 for for IN cord-293966-5c466xvz 84 29 the the DT cord-293966-5c466xvz 84 30 proper proper JJ cord-293966-5c466xvz 84 31 insertion insertion NN cord-293966-5c466xvz 84 32 of of IN cord-293966-5c466xvz 84 33 the the DT cord-293966-5c466xvz 84 34 gene gene NN cord-293966-5c466xvz 84 35 cassette cassette NN cord-293966-5c466xvz 84 36 by by IN cord-293966-5c466xvz 84 37 PCR PCR NNP cord-293966-5c466xvz 84 38 . . . cord-293966-5c466xvz 85 1 2 2 LS cord-293966-5c466xvz 85 2 . . . cord-293966-5c466xvz 86 1 Set Set VBN cord-293966-5c466xvz 86 2 up up RP cord-293966-5c466xvz 86 3 PCR pcr NN cord-293966-5c466xvz 86 4 reaction reaction NN cord-293966-5c466xvz 86 5 and and CC cord-293966-5c466xvz 86 6 perform perform VB cord-293966-5c466xvz 86 7 reaction reaction NN cord-293966-5c466xvz 86 8 according accord VBG cord-293966-5c466xvz 86 9 to to IN cord-293966-5c466xvz 86 10 manufacturer manufacturer NN cord-293966-5c466xvz 86 11 's 's POS cord-293966-5c466xvz 86 12 protocol protocol NN cord-293966-5c466xvz 86 13 with with IN cord-293966-5c466xvz 86 14 following follow VBG cord-293966-5c466xvz 86 15 modifications modification NNS cord-293966-5c466xvz 86 16 ( ( -LRB- cord-293966-5c466xvz 86 17 Fig fig NN cord-293966-5c466xvz 86 18 . . . cord-293966-5c466xvz 86 19 1b 1b CD cord-293966-5c466xvz 86 20 ) ) -RRB- cord-293966-5c466xvz 86 21 . . . cord-293966-5c466xvz 87 1 Fig Fig NNP cord-293966-5c466xvz 87 2 . . NNP cord-293966-5c466xvz 87 3 2 2 CD cord-293966-5c466xvz 87 4 Model model NN cord-293966-5c466xvz 87 5 of of IN cord-293966-5c466xvz 87 6 the the DT cord-293966-5c466xvz 87 7 PCR PCR NNP cord-293966-5c466xvz 87 8 product product NN cord-293966-5c466xvz 87 9 used use VBN cord-293966-5c466xvz 87 10 for for IN cord-293966-5c466xvz 87 11 inserting insert VBG cord-293966-5c466xvz 87 12 specific specific JJ cord-293966-5c466xvz 87 13 sequences sequence NNS cord-293966-5c466xvz 87 14 into into IN cord-293966-5c466xvz 87 15 BACs bac NNS cord-293966-5c466xvz 87 16 using use VBG cord-293966-5c466xvz 87 17 lambda lambda NN cord-293966-5c466xvz 87 18 red red JJ cord-293966-5c466xvz 87 19 recombination recombination NN cord-293966-5c466xvz 87 20 . . . cord-293966-5c466xvz 88 1 The the DT cord-293966-5c466xvz 88 2 full full JJ cord-293966-5c466xvz 88 3 sequence sequence NN cord-293966-5c466xvz 88 4 for for IN cord-293966-5c466xvz 88 5 insertion insertion NN cord-293966-5c466xvz 88 6 is be VBZ cord-293966-5c466xvz 88 7 incorporated incorporate VBN cord-293966-5c466xvz 88 8 at at IN cord-293966-5c466xvz 88 9 the the DT cord-293966-5c466xvz 88 10 5 5 CD cord-293966-5c466xvz 88 11 0 0 CD cord-293966-5c466xvz 88 12 end end NN cord-293966-5c466xvz 88 13 of of IN cord-293966-5c466xvz 88 14 the the DT cord-293966-5c466xvz 88 15 Kan Kan NNP cord-293966-5c466xvz 88 16 R R NNP cord-293966-5c466xvz 88 17 -I -I NNP cord-293966-5c466xvz 88 18 - - HYPH cord-293966-5c466xvz 88 19 SceI SceI NNP cord-293966-5c466xvz 88 20 cassette cassette NN cord-293966-5c466xvz 88 21 while while IN cord-293966-5c466xvz 88 22 at at RB cord-293966-5c466xvz 88 23 least least JJS cord-293966-5c466xvz 88 24 50 50 CD cord-293966-5c466xvz 88 25 nt nt RB cord-293966-5c466xvz 88 26 of of IN cord-293966-5c466xvz 88 27 sequence sequence NN cord-293966-5c466xvz 88 28 homologous homologous JJ cord-293966-5c466xvz 88 29 to to IN cord-293966-5c466xvz 88 30 the the DT cord-293966-5c466xvz 88 31 3 3 CD cord-293966-5c466xvz 88 32 0 0 CD cord-293966-5c466xvz 88 33 end end NN cord-293966-5c466xvz 88 34 of of IN cord-293966-5c466xvz 88 35 the the DT cord-293966-5c466xvz 88 36 insertion insertion NN cord-293966-5c466xvz 88 37 sequence sequence NN cord-293966-5c466xvz 88 38 is be VBZ cord-293966-5c466xvz 88 39 incorporated incorporate VBN cord-293966-5c466xvz 88 40 at at IN cord-293966-5c466xvz 88 41 the the DT cord-293966-5c466xvz 88 42 3 3 CD cord-293966-5c466xvz 88 43 0 0 CD cord-293966-5c466xvz 88 44 end end NN cord-293966-5c466xvz 88 45 of of IN cord-293966-5c466xvz 88 46 this this DT cord-293966-5c466xvz 88 47 cassette cassette NN cord-293966-5c466xvz 88 48 . . . cord-293966-5c466xvz 89 1 Surrounding surround VBG cord-293966-5c466xvz 89 2 these these DT cord-293966-5c466xvz 89 3 sequences sequence NNS cord-293966-5c466xvz 89 4 are be VBP cord-293966-5c466xvz 89 5 50 50 CD cord-293966-5c466xvz 89 6 nt nt RB cord-293966-5c466xvz 89 7 of of IN cord-293966-5c466xvz 89 8 sequence sequence NN cord-293966-5c466xvz 89 9 homologous homologous JJ cord-293966-5c466xvz 89 10 to to IN cord-293966-5c466xvz 89 11 the the DT cord-293966-5c466xvz 89 12 viral viral JJ cord-293966-5c466xvz 89 13 sequence sequence NN cord-293966-5c466xvz 89 14 where where WRB cord-293966-5c466xvz 89 15 the the DT cord-293966-5c466xvz 89 16 sequence sequence NN cord-293966-5c466xvz 89 17 is be VBZ cord-293966-5c466xvz 89 18 to to TO cord-293966-5c466xvz 89 19 be be VB cord-293966-5c466xvz 89 20 inserted insert VBN cord-293966-5c466xvz 89 21 3 3 CD cord-293966-5c466xvz 89 22 . . . cord-293966-5c466xvz 90 1 For for IN cord-293966-5c466xvz 90 2 a a DT cord-293966-5c466xvz 90 3 PCR pcr NN cord-293966-5c466xvz 90 4 template template NN cord-293966-5c466xvz 90 5 , , , cord-293966-5c466xvz 90 6 use~50 use~50 CD cord-293966-5c466xvz 90 7 ng ng NN cord-293966-5c466xvz 90 8 of of IN cord-293966-5c466xvz 90 9 the the DT cord-293966-5c466xvz 90 10 pEP pEP NNP cord-293966-5c466xvz 90 11 - - HYPH cord-293966-5c466xvz 90 12 KanS KanS NNP cord-293966-5c466xvz 90 13 plasmid plasmid NN cord-293966-5c466xvz 90 14 . . . cord-293966-5c466xvz 91 1 4 4 LS cord-293966-5c466xvz 91 2 . . . cord-293966-5c466xvz 92 1 Use Use NNP cord-293966-5c466xvz 92 2 1 1 CD cord-293966-5c466xvz 92 3 μL μl CD cord-293966-5c466xvz 92 4 high high JJ cord-293966-5c466xvz 92 5 - - HYPH cord-293966-5c466xvz 92 6 fidelity fidelity NN cord-293966-5c466xvz 92 7 polymerase polymerase NN cord-293966-5c466xvz 92 8 ( ( -LRB- cord-293966-5c466xvz 92 9 see see VB cord-293966-5c466xvz 92 10 Note Note NNP cord-293966-5c466xvz 92 11 10 10 CD cord-293966-5c466xvz 92 12 ) ) -RRB- cord-293966-5c466xvz 92 13 . . . cord-293966-5c466xvz 93 1 procedure procedure NN cord-293966-5c466xvz 93 2 lowering lower VBG cord-293966-5c466xvz 93 3 the the DT cord-293966-5c466xvz 93 4 annealing anneal VBG cord-293966-5c466xvz 93 5 temperature temperature NN cord-293966-5c466xvz 93 6 by by IN cord-293966-5c466xvz 93 7 1 1 CD cord-293966-5c466xvz 93 8 C c NN cord-293966-5c466xvz 93 9 starting start VBG cord-293966-5c466xvz 93 10 at at IN cord-293966-5c466xvz 93 11 68 68 CD cord-293966-5c466xvz 93 12 C c NN cord-293966-5c466xvz 93 13 and and CC cord-293966-5c466xvz 93 14 continuing continue VBG cord-293966-5c466xvz 93 15 the the DT cord-293966-5c466xvz 93 16 PCR PCR NNP cord-293966-5c466xvz 93 17 reaction reaction NN cord-293966-5c466xvz 93 18 for for IN cord-293966-5c466xvz 93 19 25 25 CD cord-293966-5c466xvz 93 20 cycles cycle NNS cord-293966-5c466xvz 93 21 . . . cord-293966-5c466xvz 94 1 Using use VBG cord-293966-5c466xvz 94 2 this this DT cord-293966-5c466xvz 94 3 method method NN cord-293966-5c466xvz 94 4 we -PRON- PRP cord-293966-5c466xvz 94 5 rarely rarely RB cord-293966-5c466xvz 94 6 see see VBP cord-293966-5c466xvz 94 7 spurious spurious JJ cord-293966-5c466xvz 94 8 PCR PCR NNP cord-293966-5c466xvz 94 9 products product NNS cord-293966-5c466xvz 94 10 . . . cord-293966-5c466xvz 95 1 6 6 LS cord-293966-5c466xvz 95 2 . . . cord-293966-5c466xvz 96 1 Analyze analyze VB cord-293966-5c466xvz 96 2 the the DT cord-293966-5c466xvz 96 3 PCR PCR NNP cord-293966-5c466xvz 96 4 product product NN cord-293966-5c466xvz 96 5 on on IN cord-293966-5c466xvz 96 6 an an DT cord-293966-5c466xvz 96 7 agarose agarose JJ cord-293966-5c466xvz 96 8 gel gel NN cord-293966-5c466xvz 96 9 with with IN cord-293966-5c466xvz 96 10 ethidium ethidium NN cord-293966-5c466xvz 96 11 bromide bromide NN cord-293966-5c466xvz 96 12 and and CC cord-293966-5c466xvz 96 13 image image VB cord-293966-5c466xvz 96 14 it -PRON- PRP cord-293966-5c466xvz 96 15 using use VBG cord-293966-5c466xvz 96 16 a a DT cord-293966-5c466xvz 96 17 UV uv NN cord-293966-5c466xvz 96 18 - - HYPH cord-293966-5c466xvz 96 19 gel gel NN cord-293966-5c466xvz 96 20 box box NN cord-293966-5c466xvz 96 21 and and CC cord-293966-5c466xvz 96 22 gel gel NN cord-293966-5c466xvz 96 23 - - HYPH cord-293966-5c466xvz 96 24 imaging image VBG cord-293966-5c466xvz 96 25 software software NN cord-293966-5c466xvz 96 26 . . . cord-293966-5c466xvz 97 1 PCR PCR NNP cord-293966-5c466xvz 97 2 product product NN cord-293966-5c466xvz 97 3 should should MD cord-293966-5c466xvz 97 4 be~1.2 be~1.2 VB cord-293966-5c466xvz 97 5 kb kb NNP cord-293966-5c466xvz 97 6 . . NNP cord-293966-5c466xvz 97 7 7 7 CD cord-293966-5c466xvz 97 8 . . . cord-293966-5c466xvz 98 1 Purify purify VB cord-293966-5c466xvz 98 2 the the DT cord-293966-5c466xvz 98 3 PCR PCR NNP cord-293966-5c466xvz 98 4 product product NN cord-293966-5c466xvz 98 5 using use VBG cord-293966-5c466xvz 98 6 the the DT cord-293966-5c466xvz 98 7 PureLink PureLink NNP cord-293966-5c466xvz 98 8 PCR PCR NNP cord-293966-5c466xvz 98 9 purification purification NN cord-293966-5c466xvz 98 10 kit kit NN cord-293966-5c466xvz 98 11 ( ( -LRB- cord-293966-5c466xvz 98 12 see see VB cord-293966-5c466xvz 98 13 Note Note NNP cord-293966-5c466xvz 98 14 5 5 CD cord-293966-5c466xvz 98 15 ) ) -RRB- cord-293966-5c466xvz 98 16 . . . cord-293966-5c466xvz 99 1 Use use VB cord-293966-5c466xvz 99 2 binding bind VBG cord-293966-5c466xvz 99 3 buffer buffer NN cord-293966-5c466xvz 99 4 B3 b3 NN cord-293966-5c466xvz 99 5 according accord VBG cord-293966-5c466xvz 99 6 to to IN cord-293966-5c466xvz 99 7 manufacturer manufacturer NN cord-293966-5c466xvz 99 8 's 's POS cord-293966-5c466xvz 99 9 protocol protocol NN cord-293966-5c466xvz 99 10 to to TO cord-293966-5c466xvz 99 11 remove remove VB cord-293966-5c466xvz 99 12 primer primer NN cord-293966-5c466xvz 99 13 dimers dimer NNS cord-293966-5c466xvz 99 14 from from IN cord-293966-5c466xvz 99 15 the the DT cord-293966-5c466xvz 99 16 mixture mixture NN cord-293966-5c466xvz 99 17 . . . cord-293966-5c466xvz 100 1 Elute Elute NNP cord-293966-5c466xvz 100 2 DNA DNA NNP cord-293966-5c466xvz 100 3 into into IN cord-293966-5c466xvz 100 4 44 44 CD cord-293966-5c466xvz 100 5 μL μL NNS cord-293966-5c466xvz 100 6 of of IN cord-293966-5c466xvz 100 7 water water NN cord-293966-5c466xvz 100 8 . . . cord-293966-5c466xvz 101 1 8 8 CD cord-293966-5c466xvz 101 2 . . . cord-293966-5c466xvz 102 1 DpnI DpnI NNP cord-293966-5c466xvz 102 2 digest digest VBP cord-293966-5c466xvz 102 3 the the DT cord-293966-5c466xvz 102 4 pEP pEP NNP cord-293966-5c466xvz 102 5 - - HYPH cord-293966-5c466xvz 102 6 KanS KanS NNP cord-293966-5c466xvz 102 7 plasmid plasmid NN cord-293966-5c466xvz 102 8 in in IN cord-293966-5c466xvz 102 9 the the DT cord-293966-5c466xvz 102 10 purified purify VBN cord-293966-5c466xvz 102 11 PCR PCR NNP cord-293966-5c466xvz 102 12 product product NN cord-293966-5c466xvz 102 13 ( ( -LRB- cord-293966-5c466xvz 102 14 Fig Fig NNP cord-293966-5c466xvz 102 15 . . . cord-293966-5c466xvz 102 16 1b 1b CD cord-293966-5c466xvz 102 17 ) ) -RRB- cord-293966-5c466xvz 102 18 . . . cord-293966-5c466xvz 103 1 DpnI DpnI NNP cord-293966-5c466xvz 103 2 specifically specifically RB cord-293966-5c466xvz 103 3 cleaves cleave VBZ cord-293966-5c466xvz 103 4 methylated methylate VBN cord-293966-5c466xvz 103 5 DNA dna NN cord-293966-5c466xvz 103 6 and and CC cord-293966-5c466xvz 103 7 is be VBZ cord-293966-5c466xvz 103 8 needed need VBN cord-293966-5c466xvz 103 9 to to TO cord-293966-5c466xvz 103 10 digest digest VB cord-293966-5c466xvz 103 11 the the DT cord-293966-5c466xvz 103 12 pEP pEP NNP cord-293966-5c466xvz 103 13 - - HYPH cord-293966-5c466xvz 103 14 KanS KanS NNP cord-293966-5c466xvz 103 15 plasmid plasmid NN cord-293966-5c466xvz 103 16 used use VBN cord-293966-5c466xvz 103 17 in in IN cord-293966-5c466xvz 103 18 the the DT cord-293966-5c466xvz 103 19 PCR PCR NNP cord-293966-5c466xvz 103 20 reaction reaction NN cord-293966-5c466xvz 103 21 . . . cord-293966-5c466xvz 104 1 It -PRON- PRP cord-293966-5c466xvz 104 2 has have VBZ cord-293966-5c466xvz 104 3 a a DT cord-293966-5c466xvz 104 4 4 4 CD cord-293966-5c466xvz 104 5 bp bp NNP cord-293966-5c466xvz 104 6 recognition recognition NN cord-293966-5c466xvz 104 7 site site NN cord-293966-5c466xvz 104 8 so so IN cord-293966-5c466xvz 104 9 it -PRON- PRP cord-293966-5c466xvz 104 10 should should MD cord-293966-5c466xvz 104 11 cleave cleave VB cord-293966-5c466xvz 104 12 DNA DNA NNP cord-293966-5c466xvz 104 13 approximately approximately RB cord-293966-5c466xvz 104 14 every every DT cord-293966-5c466xvz 104 15 250 250 CD cord-293966-5c466xvz 104 16 bp bp NNP cord-293966-5c466xvz 104 17 . . . cord-293966-5c466xvz 105 1 Without without IN cord-293966-5c466xvz 105 2 this this DT cord-293966-5c466xvz 105 3 digestion digestion NN cord-293966-5c466xvz 105 4 all all DT cord-293966-5c466xvz 105 5 of of IN cord-293966-5c466xvz 105 6 your -PRON- PRP$ cord-293966-5c466xvz 105 7 transformants transformant NNS cord-293966-5c466xvz 105 8 will will MD cord-293966-5c466xvz 105 9 maintain maintain VB cord-293966-5c466xvz 105 10 the the DT cord-293966-5c466xvz 105 11 pEP pEP NNP cord-293966-5c466xvz 105 12 - - HYPH cord-293966-5c466xvz 105 13 KanS KanS NNP cord-293966-5c466xvz 105 14 plasmid plasmid NN cord-293966-5c466xvz 105 15 as as IN cord-293966-5c466xvz 105 16 its -PRON- PRP$ cord-293966-5c466xvz 105 17 transformation transformation NN cord-293966-5c466xvz 105 18 is be VBZ cord-293966-5c466xvz 105 19 much much RB cord-293966-5c466xvz 105 20 more more RBR cord-293966-5c466xvz 105 21 efficient efficient JJ cord-293966-5c466xvz 105 22 than than IN cord-293966-5c466xvz 105 23 the the DT cord-293966-5c466xvz 105 24 recombination recombination NN cord-293966-5c466xvz 105 25 of of IN cord-293966-5c466xvz 105 26 the the DT cord-293966-5c466xvz 105 27 PCR PCR NNP cord-293966-5c466xvz 105 28 product product NN cord-293966-5c466xvz 105 29 . . . cord-293966-5c466xvz 106 1 Incubate incubate VB cord-293966-5c466xvz 106 2 for for IN cord-293966-5c466xvz 106 3 1 1 CD cord-293966-5c466xvz 106 4 - - SYM cord-293966-5c466xvz 106 5 3 3 CD cord-293966-5c466xvz 106 6 h h NN cord-293966-5c466xvz 106 7 at at IN cord-293966-5c466xvz 106 8 37 37 CD cord-293966-5c466xvz 106 9 C. C. NNP cord-293966-5c466xvz 106 10 4 4 CD cord-293966-5c466xvz 106 11 . . . cord-293966-5c466xvz 107 1 Carefully carefully RB cord-293966-5c466xvz 107 2 transfer transfer VB cord-293966-5c466xvz 107 3 the the DT cord-293966-5c466xvz 107 4 mixture mixture NN cord-293966-5c466xvz 107 5 into into IN cord-293966-5c466xvz 107 6 the the DT cord-293966-5c466xvz 107 7 groove groove NN cord-293966-5c466xvz 107 8 of of IN cord-293966-5c466xvz 107 9 the the DT cord-293966-5c466xvz 107 10 electroporation electroporation NN cord-293966-5c466xvz 107 11 cuvette cuvette NN cord-293966-5c466xvz 107 12 on on IN cord-293966-5c466xvz 107 13 ice ice NN cord-293966-5c466xvz 107 14 . . . cord-293966-5c466xvz 108 1 5 5 LS cord-293966-5c466xvz 108 2 . . . cord-293966-5c466xvz 109 1 Wipe wipe VB cord-293966-5c466xvz 109 2 any any DT cord-293966-5c466xvz 109 3 ice ice NN cord-293966-5c466xvz 109 4 water water NN cord-293966-5c466xvz 109 5 from from IN cord-293966-5c466xvz 109 6 outside outside RB cord-293966-5c466xvz 109 7 of of IN cord-293966-5c466xvz 109 8 cuvette cuvette NN cord-293966-5c466xvz 109 9 and and CC cord-293966-5c466xvz 109 10 pulse pulse NN cord-293966-5c466xvz 109 11 at at IN cord-293966-5c466xvz 109 12 25 25 CD cord-293966-5c466xvz 109 13 μF μf CD cord-293966-5c466xvz 109 14 , , , cord-293966-5c466xvz 109 15 6 6 CD cord-293966-5c466xvz 109 16 . . . cord-293966-5c466xvz 110 1 Recover recover VB cord-293966-5c466xvz 110 2 by by IN cord-293966-5c466xvz 110 3 immediately immediately RB cord-293966-5c466xvz 110 4 adding add VBG cord-293966-5c466xvz 110 5 0.5 0.5 CD cord-293966-5c466xvz 110 6 - - SYM cord-293966-5c466xvz 110 7 1 1 CD cord-293966-5c466xvz 110 8 mL ml NN cord-293966-5c466xvz 110 9 SOC SOC NNP cord-293966-5c466xvz 110 10 to to IN cord-293966-5c466xvz 110 11 the the DT cord-293966-5c466xvz 110 12 cuvette cuvette NN cord-293966-5c466xvz 110 13 , , , cord-293966-5c466xvz 110 14 and and CC cord-293966-5c466xvz 110 15 then then RB cord-293966-5c466xvz 110 16 transfer transfer VB cord-293966-5c466xvz 110 17 the the DT cord-293966-5c466xvz 110 18 mixture mixture NN cord-293966-5c466xvz 110 19 to to IN cord-293966-5c466xvz 110 20 a a DT cord-293966-5c466xvz 110 21 14 14 CD cord-293966-5c466xvz 110 22 mL ml NN cord-293966-5c466xvz 110 23 culture culture NN cord-293966-5c466xvz 110 24 tube tube NN cord-293966-5c466xvz 110 25 . . . cord-293966-5c466xvz 111 1 Incubate incubate VB cord-293966-5c466xvz 111 2 at at IN cord-293966-5c466xvz 111 3 32 32 CD cord-293966-5c466xvz 111 4 C c NN cord-293966-5c466xvz 111 5 and and CC cord-293966-5c466xvz 111 6 220 220 CD cord-293966-5c466xvz 111 7 rpm rpm NN cord-293966-5c466xvz 111 8 for for IN cord-293966-5c466xvz 111 9 3 3 CD cord-293966-5c466xvz 111 10 - - SYM cord-293966-5c466xvz 111 11 5 5 CD cord-293966-5c466xvz 111 12 h. h. NN cord-293966-5c466xvz 112 1 This this DT cord-293966-5c466xvz 112 2 is be VBZ cord-293966-5c466xvz 112 3 when when WRB cord-293966-5c466xvz 112 4 the the DT cord-293966-5c466xvz 112 5 recombination recombination NN cord-293966-5c466xvz 112 6 occurs occur VBZ cord-293966-5c466xvz 113 1 ( ( -LRB- cord-293966-5c466xvz 113 2 Fig Fig NNP cord-293966-5c466xvz 113 3 . . . cord-293966-5c466xvz 113 4 1d 1d CD cord-293966-5c466xvz 113 5 ) ) -RRB- cord-293966-5c466xvz 114 1 Fig Fig NNP cord-293966-5c466xvz 114 2 . . . cord-293966-5c466xvz 115 1 3 3 LS cord-293966-5c466xvz 115 2 Replica Replica NNP cord-293966-5c466xvz 115 3 plate plate NN cord-293966-5c466xvz 115 4 grids grid NNS cord-293966-5c466xvz 115 5 . . . cord-293966-5c466xvz 116 1 These these DT cord-293966-5c466xvz 116 2 grids grid NNS cord-293966-5c466xvz 116 3 allow allow VBP cord-293966-5c466xvz 116 4 for for IN cord-293966-5c466xvz 116 5 the the DT cord-293966-5c466xvz 116 6 easy easy JJ cord-293966-5c466xvz 116 7 identification identification NN cord-293966-5c466xvz 116 8 of of IN cord-293966-5c466xvz 116 9 identical identical JJ cord-293966-5c466xvz 116 10 colonies colony NNS cord-293966-5c466xvz 116 11 that that WDT cord-293966-5c466xvz 116 12 have have VBP cord-293966-5c466xvz 116 13 been be VBN cord-293966-5c466xvz 116 14 plated plate VBN cord-293966-5c466xvz 116 15 on on IN cord-293966-5c466xvz 116 16 each each DT cord-293966-5c466xvz 116 17 plate plate NN cord-293966-5c466xvz 116 18 . . . cord-293966-5c466xvz 117 1 Using use VBG cord-293966-5c466xvz 117 2 a a DT cord-293966-5c466xvz 117 3 toothpick toothpick NN cord-293966-5c466xvz 117 4 , , , cord-293966-5c466xvz 117 5 dot dot VB cord-293966-5c466xvz 117 6 a a DT cord-293966-5c466xvz 117 7 single single JJ cord-293966-5c466xvz 117 8 colony colony NN cord-293966-5c466xvz 117 9 in in IN cord-293966-5c466xvz 117 10 the the DT cord-293966-5c466xvz 117 11 same same JJ cord-293966-5c466xvz 117 12 spot spot NN cord-293966-5c466xvz 117 13 on on IN cord-293966-5c466xvz 117 14 each each DT cord-293966-5c466xvz 117 15 plate plate NN cord-293966-5c466xvz 117 16 . . . cord-293966-5c466xvz 118 1 For for IN cord-293966-5c466xvz 118 2 both both DT cord-293966-5c466xvz 118 3 positive positive JJ cord-293966-5c466xvz 118 4 and and CC cord-293966-5c466xvz 118 5 negative negative JJ cord-293966-5c466xvz 118 6 selection selection NN cord-293966-5c466xvz 118 7 , , , cord-293966-5c466xvz 118 8 MERS MERS NNP cord-293966-5c466xvz 118 9 - - HYPH cord-293966-5c466xvz 118 10 BAC BAC NNP cord-293966-5c466xvz 118 11 clones clone NNS cord-293966-5c466xvz 118 12 that that WDT cord-293966-5c466xvz 118 13 have have VBP cord-293966-5c466xvz 118 14 successfully successfully RB cord-293966-5c466xvz 118 15 undergone undergo VBN cord-293966-5c466xvz 118 16 recombination recombination NN cord-293966-5c466xvz 118 17 will will MD cord-293966-5c466xvz 118 18 grow grow VB cord-293966-5c466xvz 118 19 on on IN cord-293966-5c466xvz 118 20 the the DT cord-293966-5c466xvz 118 21 plate plate NN cord-293966-5c466xvz 118 22 on on IN cord-293966-5c466xvz 118 23 the the DT cord-293966-5c466xvz 118 24 right right NN cord-293966-5c466xvz 118 25 , , , cord-293966-5c466xvz 118 26 but but CC cord-293966-5c466xvz 118 27 not not RB cord-293966-5c466xvz 118 28 on on IN cord-293966-5c466xvz 118 29 the the DT cord-293966-5c466xvz 118 30 plate plate NN cord-293966-5c466xvz 118 31 on on IN cord-293966-5c466xvz 118 32 the the DT cord-293966-5c466xvz 118 33 left left JJ cord-293966-5c466xvz 118 34 Day Day NNP cord-293966-5c466xvz 118 35 4 4 CD cord-293966-5c466xvz 118 36 3 3 CD cord-293966-5c466xvz 118 37 . . . cord-293966-5c466xvz 119 1 Following follow VBG cord-293966-5c466xvz 119 2 o o NN cord-293966-5c466xvz 119 3 / / SYM cord-293966-5c466xvz 119 4 n n CC cord-293966-5c466xvz 119 5 incubation incubation NN cord-293966-5c466xvz 119 6 , , , cord-293966-5c466xvz 119 7 create create VB cord-293966-5c466xvz 119 8 a a DT cord-293966-5c466xvz 119 9 freezer freezer NN cord-293966-5c466xvz 119 10 stock stock NN cord-293966-5c466xvz 119 11 of of IN cord-293966-5c466xvz 119 12 the the DT cord-293966-5c466xvz 119 13 bacteria bacteria NNS cord-293966-5c466xvz 119 14 , , , cord-293966-5c466xvz 119 15 then then RB cord-293966-5c466xvz 119 16 purify purify VB cord-293966-5c466xvz 119 17 the the DT cord-293966-5c466xvz 119 18 BAC BAC NNP cord-293966-5c466xvz 119 19 DNA DNA NNP cord-293966-5c466xvz 119 20 using use VBG cord-293966-5c466xvz 119 21 a a DT cord-293966-5c466xvz 119 22 standard standard JJ cord-293966-5c466xvz 119 23 miniprep miniprep NNP cord-293966-5c466xvz 119 24 kit kit NN cord-293966-5c466xvz 119 25 . . . cord-293966-5c466xvz 120 1 Using use VBG cord-293966-5c466xvz 120 2 1 1 CD cord-293966-5c466xvz 120 3 μL μL NNS cord-293966-5c466xvz 120 4 of of IN cord-293966-5c466xvz 120 5 the the DT cord-293966-5c466xvz 120 6 BAC BAC NNP cord-293966-5c466xvz 120 7 DNA DNA NNP cord-293966-5c466xvz 120 8 , , , cord-293966-5c466xvz 120 9 use use VB cord-293966-5c466xvz 120 10 the the DT cord-293966-5c466xvz 120 11 external external JJ cord-293966-5c466xvz 120 12 primers primer NNS cord-293966-5c466xvz 120 13 located locate VBD cord-293966-5c466xvz 120 14 100 100 CD cord-293966-5c466xvz 120 15 - - SYM cord-293966-5c466xvz 120 16 200 200 CD cord-293966-5c466xvz 120 17 bp bp NNP cord-293966-5c466xvz 120 18 outside outside IN cord-293966-5c466xvz 120 19 the the DT cord-293966-5c466xvz 120 20 region region NN cord-293966-5c466xvz 120 21 of of IN cord-293966-5c466xvz 120 22 homology homology NN cord-293966-5c466xvz 120 23 you -PRON- PRP cord-293966-5c466xvz 120 24 previously previously RB cord-293966-5c466xvz 120 25 designed design VBN cord-293966-5c466xvz 120 26 to to TO cord-293966-5c466xvz 120 27 test test VB cord-293966-5c466xvz 120 28 for for IN cord-293966-5c466xvz 120 29 the the DT cord-293966-5c466xvz 120 30 insertion insertion NN cord-293966-5c466xvz 120 31 of of IN cord-293966-5c466xvz 120 32 Kan Kan NNP cord-293966-5c466xvz 120 33 r r NNP cord-293966-5c466xvz 120 34 -I -I NNP cord-293966-5c466xvz 120 35 - - : cord-293966-5c466xvz 120 36 SceI SceI NNP cord-293966-5c466xvz 120 37 by by IN cord-293966-5c466xvz 120 38 PCR PCR NNP cord-293966-5c466xvz 120 39 . . . cord-293966-5c466xvz 121 1 If if IN cord-293966-5c466xvz 121 2 the the DT cord-293966-5c466xvz 121 3 insertion insertion NN cord-293966-5c466xvz 121 4 was be VBD cord-293966-5c466xvz 121 5 successful successful JJ cord-293966-5c466xvz 121 6 , , , cord-293966-5c466xvz 121 7 the the DT cord-293966-5c466xvz 121 8 DNA dna NN cord-293966-5c466xvz 121 9 band band NN cord-293966-5c466xvz 121 10 from from IN cord-293966-5c466xvz 121 11 the the DT cord-293966-5c466xvz 121 12 PCR PCR NNP cord-293966-5c466xvz 121 13 should should MD cord-293966-5c466xvz 121 14 be~1 be~1 VB cord-293966-5c466xvz 121 15 kb kb NNP cord-293966-5c466xvz 121 16 larger large JJR cord-293966-5c466xvz 121 17 than than IN cord-293966-5c466xvz 121 18 the the DT cord-293966-5c466xvz 121 19 band band NN cord-293966-5c466xvz 121 20 from from IN cord-293966-5c466xvz 121 21 the the DT cord-293966-5c466xvz 121 22 MERS MERS NNP cord-293966-5c466xvz 121 23 - - HYPH cord-293966-5c466xvz 121 24 CoV CoV NNP cord-293966-5c466xvz 121 25 wild wild JJ cord-293966-5c466xvz 121 26 - - HYPH cord-293966-5c466xvz 121 27 type type NN cord-293966-5c466xvz 121 28 BAC BAC NNP cord-293966-5c466xvz 121 29 ( ( -LRB- cord-293966-5c466xvz 121 30 see see VB cord-293966-5c466xvz 121 31 Note Note NNP cord-293966-5c466xvz 121 32 12 12 CD cord-293966-5c466xvz 121 33 ) ) -RRB- cord-293966-5c466xvz 121 34 . . . cord-293966-5c466xvz 122 1 To to TO cord-293966-5c466xvz 122 2 speed speed VB cord-293966-5c466xvz 122 3 this this DT cord-293966-5c466xvz 122 4 process process NN cord-293966-5c466xvz 122 5 up up RP cord-293966-5c466xvz 122 6 , , , cord-293966-5c466xvz 122 7 colonies colony NNS cord-293966-5c466xvz 122 8 may may MD cord-293966-5c466xvz 122 9 be be VB cord-293966-5c466xvz 122 10 collected collect VBN cord-293966-5c466xvz 122 11 off off IN cord-293966-5c466xvz 122 12 the the DT cord-293966-5c466xvz 122 13 plate plate NN cord-293966-5c466xvz 122 14 on on IN cord-293966-5c466xvz 122 15 day day NN cord-293966-5c466xvz 122 16 3 3 CD cord-293966-5c466xvz 122 17 and and CC cord-293966-5c466xvz 122 18 directly directly RB cord-293966-5c466xvz 122 19 tested test VBN cord-293966-5c466xvz 122 20 by by IN cord-293966-5c466xvz 122 21 PCR PCR NNP cord-293966-5c466xvz 122 22 . . . cord-293966-5c466xvz 123 1 Colonies colony NNS cord-293966-5c466xvz 123 2 that that WDT cord-293966-5c466xvz 123 3 pass pass VBP cord-293966-5c466xvz 123 4 the the DT cord-293966-5c466xvz 123 5 PCR PCR NNP cord-293966-5c466xvz 123 6 screen screen NN cord-293966-5c466xvz 123 7 can can MD cord-293966-5c466xvz 123 8 then then RB cord-293966-5c466xvz 123 9 progress progress VB cord-293966-5c466xvz 123 10 to to IN cord-293966-5c466xvz 123 11 the the DT cord-293966-5c466xvz 123 12 negative negative JJ cord-293966-5c466xvz 123 13 selection selection NN cord-293966-5c466xvz 123 14 protocol protocol NN cord-293966-5c466xvz 123 15 ( ( -LRB- cord-293966-5c466xvz 123 16 3.5 3.5 CD cord-293966-5c466xvz 123 17 ) ) -RRB- cord-293966-5c466xvz 123 18 ( ( -LRB- cord-293966-5c466xvz 123 19 see see VB cord-293966-5c466xvz 123 20 Note Note NNP cord-293966-5c466xvz 123 21 13 13 CD cord-293966-5c466xvz 123 22 ) ) -RRB- cord-293966-5c466xvz 123 23 . . . cord-293966-5c466xvz 124 1 3 3 LS cord-293966-5c466xvz 124 2 . . . cord-293966-5c466xvz 125 1 After after IN cord-293966-5c466xvz 125 2 2 2 CD cord-293966-5c466xvz 125 3 h h NN cord-293966-5c466xvz 125 4 , , , cord-293966-5c466xvz 125 5 add add VB cord-293966-5c466xvz 125 6 2 2 CD cord-293966-5c466xvz 125 7 mL mL NNS cord-293966-5c466xvz 125 8 of of IN cord-293966-5c466xvz 125 9 warm warm JJ cord-293966-5c466xvz 125 10 LB LB NNP cord-293966-5c466xvz 125 11 - - HYPH cord-293966-5c466xvz 125 12 cml cml NNP cord-293966-5c466xvz 125 13 with with IN cord-293966-5c466xvz 125 14 2 2 CD cord-293966-5c466xvz 125 15 % % NN cord-293966-5c466xvz 125 16 arabinose arabinose JJ cord-293966-5c466xvz 125 17 to to IN cord-293966-5c466xvz 125 18 the the DT cord-293966-5c466xvz 125 19 culture culture NN cord-293966-5c466xvz 125 20 tube tube NN cord-293966-5c466xvz 125 21 for for IN cord-293966-5c466xvz 125 22 a a DT cord-293966-5c466xvz 125 23 final final JJ cord-293966-5c466xvz 125 24 arabinose arabinose JJ cord-293966-5c466xvz 125 25 concentration concentration NN cord-293966-5c466xvz 125 26 of of IN cord-293966-5c466xvz 125 27 1 1 CD cord-293966-5c466xvz 125 28 % % NN cord-293966-5c466xvz 126 1 ( ( -LRB- cord-293966-5c466xvz 126 2 Fig Fig NNP cord-293966-5c466xvz 126 3 . . NNP cord-293966-5c466xvz 126 4 1 1 CD cord-293966-5c466xvz 126 5 ) ) -RRB- cord-293966-5c466xvz 126 6 . . . cord-293966-5c466xvz 127 1 Incubate incubate VB cord-293966-5c466xvz 127 2 at at IN cord-293966-5c466xvz 127 3 32 32 CD cord-293966-5c466xvz 127 4 C c NN cord-293966-5c466xvz 127 5 and and CC cord-293966-5c466xvz 127 6 220 220 CD cord-293966-5c466xvz 127 7 rpm rpm NN cord-293966-5c466xvz 127 8 for for IN cord-293966-5c466xvz 127 9 2 2 CD cord-293966-5c466xvz 127 10 h. h. NNP cord-293966-5c466xvz 127 11 Warm warm JJ cord-293966-5c466xvz 127 12 water water NN cord-293966-5c466xvz 127 13 bath bath NN cord-293966-5c466xvz 127 14 shaker shaker NN cord-293966-5c466xvz 127 15 to to IN cord-293966-5c466xvz 127 16 42 42 CD cord-293966-5c466xvz 127 17 C. C. NNP cord-293966-5c466xvz 127 18 4 4 CD cord-293966-5c466xvz 127 19 . . . cord-293966-5c466xvz 128 1 Transfer transfer VB cord-293966-5c466xvz 128 2 the the DT cord-293966-5c466xvz 128 3 culture culture NN cord-293966-5c466xvz 128 4 tubes tube NNS cord-293966-5c466xvz 128 5 to to IN cord-293966-5c466xvz 128 6 the the DT cord-293966-5c466xvz 128 7 water water NN cord-293966-5c466xvz 128 8 bath bath NN cord-293966-5c466xvz 128 9 shaker shaker NN cord-293966-5c466xvz 128 10 at at IN cord-293966-5c466xvz 128 11 42 42 CD cord-293966-5c466xvz 128 12 C c NN cord-293966-5c466xvz 128 13 and and CC cord-293966-5c466xvz 128 14 200 200 CD cord-293966-5c466xvz 128 15 rpm rpm NN cord-293966-5c466xvz 128 16 and and CC cord-293966-5c466xvz 128 17 incubate incubate VB cord-293966-5c466xvz 128 18 for for IN cord-293966-5c466xvz 128 19 30 30 CD cord-293966-5c466xvz 128 20 min min NN cord-293966-5c466xvz 128 21 ( ( -LRB- cord-293966-5c466xvz 128 22 Fig Fig NNP cord-293966-5c466xvz 128 23 . . . cord-293966-5c466xvz 128 24 1f 1f CD cord-293966-5c466xvz 128 25 ) ) -RRB- cord-293966-5c466xvz 128 26 . . . cord-293966-5c466xvz 129 1 5 5 LS cord-293966-5c466xvz 129 2 . . . cord-293966-5c466xvz 130 1 Transfer transfer VB cord-293966-5c466xvz 130 2 the the DT cord-293966-5c466xvz 130 3 culture culture NN cord-293966-5c466xvz 130 4 tubes tube NNS cord-293966-5c466xvz 130 5 back back RB cord-293966-5c466xvz 130 6 to to IN cord-293966-5c466xvz 130 7 32 32 CD cord-293966-5c466xvz 130 8 C c NN cord-293966-5c466xvz 130 9 and and CC cord-293966-5c466xvz 130 10 incubate incubate VB cord-293966-5c466xvz 130 11 for for IN cord-293966-5c466xvz 130 12 3 3 CD cord-293966-5c466xvz 130 13 - - SYM cord-293966-5c466xvz 130 14 4 4 CD cord-293966-5c466xvz 130 15 h h NN cord-293966-5c466xvz 130 16 ( ( -LRB- cord-293966-5c466xvz 130 17 Fig Fig NNP cord-293966-5c466xvz 130 18 . . . cord-293966-5c466xvz 130 19 1 1 CD cord-293966-5c466xvz 130 20 g g NN cord-293966-5c466xvz 130 21 ) ) -RRB- cord-293966-5c466xvz 130 22 . . . cord-293966-5c466xvz 131 1 6 6 LS cord-293966-5c466xvz 131 2 . . . cord-293966-5c466xvz 132 1 After after IN cord-293966-5c466xvz 132 2 the the DT cord-293966-5c466xvz 132 3 incubation incubation NN cord-293966-5c466xvz 132 4 , , , cord-293966-5c466xvz 132 5 perform perform VB cord-293966-5c466xvz 132 6 tenfold tenfold RB cord-293966-5c466xvz 132 7 serial serial JJ cord-293966-5c466xvz 132 8 dilutions dilution NNS cord-293966-5c466xvz 132 9 of of IN cord-293966-5c466xvz 132 10 the the DT cord-293966-5c466xvz 132 11 bacteria bacteria NNS cord-293966-5c466xvz 132 12 in in IN cord-293966-5c466xvz 132 13 LB LB NNP cord-293966-5c466xvz 132 14 . . . cord-293966-5c466xvz 133 1 Plate plate NN cord-293966-5c466xvz 133 2 100 100 CD cord-293966-5c466xvz 133 3 μL μL NNS cord-293966-5c466xvz 133 4 of of IN cord-293966-5c466xvz 133 5 10 10 CD cord-293966-5c466xvz 133 6 À4 à4 CD cord-293966-5c466xvz 133 7 and and CC cord-293966-5c466xvz 133 8 10 10 CD cord-293966-5c466xvz 133 9 À5 À5 NNP cord-293966-5c466xvz 133 10 dilutions dilution NNS cord-293966-5c466xvz 133 11 of of IN cord-293966-5c466xvz 133 12 original original JJ cord-293966-5c466xvz 133 13 culture culture NN cord-293966-5c466xvz 133 14 on on IN cord-293966-5c466xvz 133 15 pre pre JJ cord-293966-5c466xvz 133 16 - - JJ cord-293966-5c466xvz 133 17 warmed warm VBN cord-293966-5c466xvz 133 18 LB LB NNP cord-293966-5c466xvz 133 19 - - HYPH cord-293966-5c466xvz 133 20 cml cml NNP cord-293966-5c466xvz 133 21 plates plate NNS cord-293966-5c466xvz 133 22 containing contain VBG cord-293966-5c466xvz 133 23 1 1 CD cord-293966-5c466xvz 133 24 % % NN cord-293966-5c466xvz 133 25 arabinose arabinose NN cord-293966-5c466xvz 133 26 . . . cord-293966-5c466xvz 134 1 Incubate incubate VB cord-293966-5c466xvz 134 2 the the DT cord-293966-5c466xvz 134 3 plates plate NNS cord-293966-5c466xvz 134 4 at at IN cord-293966-5c466xvz 134 5 30 30 CD cord-293966-5c466xvz 134 6 - - SYM cord-293966-5c466xvz 134 7 32 32 CD cord-293966-5c466xvz 134 8 C. C. NNP cord-293966-5c466xvz 134 9 Day Day NNP cord-293966-5c466xvz 134 10 3 3 CD cord-293966-5c466xvz 134 11 7 7 CD cord-293966-5c466xvz 134 12 . . . cord-293966-5c466xvz 135 1 Pick pick VB cord-293966-5c466xvz 135 2 50 50 CD cord-293966-5c466xvz 135 3 colonies colony NNS cord-293966-5c466xvz 135 4 and and CC cord-293966-5c466xvz 135 5 replica replica NN cord-293966-5c466xvz 135 6 plate plate NN cord-293966-5c466xvz 135 7 on on IN cord-293966-5c466xvz 135 8 LB LB NNP cord-293966-5c466xvz 135 9 - - HYPH cord-293966-5c466xvz 135 10 cml cml NNP cord-293966-5c466xvz 135 11 / / SYM cord-293966-5c466xvz 135 12 kan kan NNP cord-293966-5c466xvz 135 13 and and CC cord-293966-5c466xvz 135 14 LB LB NNP cord-293966-5c466xvz 135 15 - - HYPH cord-293966-5c466xvz 135 16 cml cml NNP cord-293966-5c466xvz 135 17 plates plate NNS cord-293966-5c466xvz 135 18 . . . cord-293966-5c466xvz 136 1 Colonies colony NNS cord-293966-5c466xvz 136 2 that that WDT cord-293966-5c466xvz 136 3 underwent undergo VBD cord-293966-5c466xvz 136 4 correct correct JJ cord-293966-5c466xvz 136 5 recombination recombination NN cord-293966-5c466xvz 136 6 should should MD cord-293966-5c466xvz 136 7 grow grow VB cord-293966-5c466xvz 136 8 on on IN cord-293966-5c466xvz 136 9 LB LB NNP cord-293966-5c466xvz 136 10 - - HYPH cord-293966-5c466xvz 136 11 cml cml NNP cord-293966-5c466xvz 136 12 but but CC cord-293966-5c466xvz 136 13 not not RB cord-293966-5c466xvz 136 14 on on IN cord-293966-5c466xvz 136 15 LB LB NNP cord-293966-5c466xvz 136 16 - - HYPH cord-293966-5c466xvz 136 17 cml cml NNP cord-293966-5c466xvz 136 18 / / SYM cord-293966-5c466xvz 136 19 kan kan NNP cord-293966-5c466xvz 136 20 . . . cord-293966-5c466xvz 137 1 Incubate incubate VB cord-293966-5c466xvz 137 2 o o NN cord-293966-5c466xvz 137 3 / / SYM cord-293966-5c466xvz 137 4 n n CC cord-293966-5c466xvz 137 5 at at IN cord-293966-5c466xvz 137 6 32 32 CD cord-293966-5c466xvz 137 7 C. C. NNP cord-293966-5c466xvz 137 8 Efficiency Efficiency NNP cord-293966-5c466xvz 137 9 is be VBZ cord-293966-5c466xvz 137 10 generally generally RB cord-293966-5c466xvz 137 11 anywhere anywhere RB cord-293966-5c466xvz 137 12 from from IN cord-293966-5c466xvz 137 13 5 5 CD cord-293966-5c466xvz 137 14 to to TO cord-293966-5c466xvz 137 15 50 50 CD cord-293966-5c466xvz 137 16 % % NN cord-293966-5c466xvz 137 17 ( ( -LRB- cord-293966-5c466xvz 137 18 see see VB cord-293966-5c466xvz 137 19 Note Note NNP cord-293966-5c466xvz 137 20 14 14 CD cord-293966-5c466xvz 137 21 ) ) -RRB- cord-293966-5c466xvz 137 22 . . . cord-293966-5c466xvz 138 1 Day day NN cord-293966-5c466xvz 138 2 4 4 CD cord-293966-5c466xvz 138 3 8 8 CD cord-293966-5c466xvz 138 4 . . . cord-293966-5c466xvz 139 1 Pick pick VB cord-293966-5c466xvz 139 2 3 3 CD cord-293966-5c466xvz 140 1 separate separate JJ cord-293966-5c466xvz 140 2 cml cml NNP cord-293966-5c466xvz 140 3 + + CC cord-293966-5c466xvz 140 4 kan kan NNP cord-293966-5c466xvz 140 5 À À NNP cord-293966-5c466xvz 140 6 colonies colony NNS cord-293966-5c466xvz 140 7 and and CC cord-293966-5c466xvz 140 8 culture culture NN cord-293966-5c466xvz 140 9 each each DT cord-293966-5c466xvz 140 10 one one CD cord-293966-5c466xvz 140 11 in in IN cord-293966-5c466xvz 140 12 100 100 CD cord-293966-5c466xvz 140 13 mL ml NN cord-293966-5c466xvz 140 14 LB LB NNP cord-293966-5c466xvz 140 15 - - HYPH cord-293966-5c466xvz 140 16 cml cml NNP cord-293966-5c466xvz 140 17 at at IN cord-293966-5c466xvz 140 18 32 32 CD cord-293966-5c466xvz 140 19 C c NN cord-293966-5c466xvz 140 20 and and CC cord-293966-5c466xvz 140 21 220 220 CD cord-293966-5c466xvz 140 22 rpm rpm NN cord-293966-5c466xvz 140 23 o o NN cord-293966-5c466xvz 140 24 / / SYM cord-293966-5c466xvz 140 25 n n NN cord-293966-5c466xvz 140 26 . . NNP cord-293966-5c466xvz 140 27 2 2 CD cord-293966-5c466xvz 140 28 . . . cord-293966-5c466xvz 141 1 All all DT cord-293966-5c466xvz 141 2 procedures procedure NNS cord-293966-5c466xvz 141 3 from from IN cord-293966-5c466xvz 141 4 here here RB cord-293966-5c466xvz 141 5 involve involve VBP cord-293966-5c466xvz 141 6 working work VBG cord-293966-5c466xvz 141 7 with with IN cord-293966-5c466xvz 141 8 MERS MERS NNP cord-293966-5c466xvz 141 9 - - HYPH cord-293966-5c466xvz 141 10 CoV CoV NNP cord-293966-5c466xvz 141 11 which which WDT cord-293966-5c466xvz 141 12 requires require VBZ cord-293966-5c466xvz 141 13 a a DT cord-293966-5c466xvz 141 14 BSL-3 BSL-3 NNP cord-293966-5c466xvz 141 15 containment containment NN cord-293966-5c466xvz 141 16 laboratory laboratory NN cord-293966-5c466xvz 141 17 . . . cord-293966-5c466xvz 142 1 3 3 LS cord-293966-5c466xvz 142 2 . . . cord-293966-5c466xvz 143 1 Replace replace VB cord-293966-5c466xvz 143 2 medium medium NN cord-293966-5c466xvz 143 3 from from IN cord-293966-5c466xvz 143 4 cells cell NNS cord-293966-5c466xvz 143 5 with with IN cord-293966-5c466xvz 143 6 2 2 CD cord-293966-5c466xvz 143 7 mL ml NN cord-293966-5c466xvz 143 8 DMEM dmem NN cord-293966-5c466xvz 143 9 +10 +10 CD cord-293966-5c466xvz 143 10 % % NN cord-293966-5c466xvz 143 11 FBS FBS NNP cord-293966-5c466xvz 143 12 immediately immediately RB cord-293966-5c466xvz 143 13 before before IN cord-293966-5c466xvz 143 14 proceeding proceed VBG cord-293966-5c466xvz 143 15 to to IN cord-293966-5c466xvz 143 16 step4 step4 NN cord-293966-5c466xvz 143 17 . . . cord-293966-5c466xvz 144 1 6 6 LS cord-293966-5c466xvz 144 2 . . . cord-293966-5c466xvz 145 1 Cytopathic cytopathic JJ cord-293966-5c466xvz 145 2 effect effect NN cord-293966-5c466xvz 145 3 ( ( -LRB- cord-293966-5c466xvz 145 4 CPE CPE NNP cord-293966-5c466xvz 145 5 ) ) -RRB- cord-293966-5c466xvz 145 6 will will MD cord-293966-5c466xvz 145 7 start start VB cord-293966-5c466xvz 145 8 being be VBG cord-293966-5c466xvz 145 9 visible visible JJ cord-293966-5c466xvz 145 10 at at IN cord-293966-5c466xvz 145 11 3 3 CD cord-293966-5c466xvz 145 12 - - SYM cord-293966-5c466xvz 145 13 4 4 CD cord-293966-5c466xvz 145 14 days day NNS cord-293966-5c466xvz 145 15 after after IN cord-293966-5c466xvz 145 16 transfection transfection NN cord-293966-5c466xvz 145 17 . . . cord-293966-5c466xvz 146 1 Collect collect VB cord-293966-5c466xvz 146 2 cells cell NNS cord-293966-5c466xvz 146 3 and and CC cord-293966-5c466xvz 146 4 supernatant supernatant JJ cord-293966-5c466xvz 146 5 when when WRB cord-293966-5c466xvz 146 6 > > XX cord-293966-5c466xvz 146 7 50 50 CD cord-293966-5c466xvz 146 8 % % NN cord-293966-5c466xvz 146 9 of of IN cord-293966-5c466xvz 146 10 well well NN cord-293966-5c466xvz 146 11 has have VBZ cord-293966-5c466xvz 146 12 CPE CPE NNP cord-293966-5c466xvz 146 13 ( ( -LRB- cord-293966-5c466xvz 146 14 the the DT cord-293966-5c466xvz 146 15 more more RBR cord-293966-5c466xvz 146 16 the the DT cord-293966-5c466xvz 146 17 better well JJR cord-293966-5c466xvz 146 18 ) ) -RRB- cord-293966-5c466xvz 146 19 . . . cord-293966-5c466xvz 147 1 To to TO cord-293966-5c466xvz 147 2 collect collect VB cord-293966-5c466xvz 147 3 , , , cord-293966-5c466xvz 147 4 scrape scrape VB cord-293966-5c466xvz 147 5 any any DT cord-293966-5c466xvz 147 6 remaining remain VBG cord-293966-5c466xvz 147 7 cells cell NNS cord-293966-5c466xvz 147 8 off off IN cord-293966-5c466xvz 147 9 the the DT cord-293966-5c466xvz 147 10 well well NN cord-293966-5c466xvz 147 11 with with IN cord-293966-5c466xvz 147 12 a a DT cord-293966-5c466xvz 147 13 pipette pipette NN cord-293966-5c466xvz 147 14 tip tip NN cord-293966-5c466xvz 147 15 or or CC cord-293966-5c466xvz 147 16 cell cell NN cord-293966-5c466xvz 147 17 scraper scraper NN cord-293966-5c466xvz 147 18 and and CC cord-293966-5c466xvz 147 19 transfer transfer VB cord-293966-5c466xvz 147 20 the the DT cord-293966-5c466xvz 147 21 media medium NNS cord-293966-5c466xvz 147 22 and and CC cord-293966-5c466xvz 147 23 cell cell NN cord-293966-5c466xvz 147 24 debris debris NN cord-293966-5c466xvz 147 25 in in IN cord-293966-5c466xvz 147 26 a a DT cord-293966-5c466xvz 147 27 2 2 CD cord-293966-5c466xvz 147 28 mL ml NN cord-293966-5c466xvz 147 29 microcentrifuge microcentrifuge NN cord-293966-5c466xvz 147 30 tube tube NN cord-293966-5c466xvz 147 31 and and CC cord-293966-5c466xvz 147 32 freeze freeze NN cord-293966-5c466xvz 147 33 - - HYPH cord-293966-5c466xvz 147 34 thaw thaw VB cord-293966-5c466xvz 147 35 the the DT cord-293966-5c466xvz 147 36 sample sample NN cord-293966-5c466xvz 147 37 . . . cord-293966-5c466xvz 148 1 Then then RB cord-293966-5c466xvz 148 2 , , , cord-293966-5c466xvz 148 3 centrifuge centrifuge VB cord-293966-5c466xvz 148 4 the the DT cord-293966-5c466xvz 148 5 sample sample NN cord-293966-5c466xvz 149 1 at~5000 at~5000 NFP cord-293966-5c466xvz 149 2 Â â NN cord-293966-5c466xvz 149 3 g g NN cord-293966-5c466xvz 149 4 to to TO cord-293966-5c466xvz 149 5 spin spin VB cord-293966-5c466xvz 149 6 out out RP cord-293966-5c466xvz 149 7 the the DT cord-293966-5c466xvz 149 8 cell cell NN cord-293966-5c466xvz 149 9 debris debris NN cord-293966-5c466xvz 149 10 and and CC cord-293966-5c466xvz 149 11 transfer transfer VB cord-293966-5c466xvz 149 12 the the DT cord-293966-5c466xvz 149 13 supernatant supernatant NN cord-293966-5c466xvz 149 14 to to IN cord-293966-5c466xvz 149 15 a a DT cord-293966-5c466xvz 149 16 new new JJ cord-293966-5c466xvz 149 17 tube tube NN cord-293966-5c466xvz 149 18 . . . cord-293966-5c466xvz 150 1 We -PRON- PRP cord-293966-5c466xvz 150 2 term term VBP cord-293966-5c466xvz 150 3 this this DT cord-293966-5c466xvz 150 4 passage passage NN cord-293966-5c466xvz 150 5 0 0 NFP cord-293966-5c466xvz 151 1 ( ( -LRB- cord-293966-5c466xvz 151 2 P0 p0 NN cord-293966-5c466xvz 151 3 ) ) -RRB- cord-293966-5c466xvz 151 4 virus virus NN cord-293966-5c466xvz 151 5 . . . cord-293966-5c466xvz 152 1 3 3 LS cord-293966-5c466xvz 152 2 . . . cord-293966-5c466xvz 153 1 For for IN cord-293966-5c466xvz 153 2 creating create VBG cord-293966-5c466xvz 153 3 long long JJ cord-293966-5c466xvz 153 4 oligos oligo NNS cord-293966-5c466xvz 153 5 , , , cord-293966-5c466xvz 153 6 we -PRON- PRP cord-293966-5c466xvz 153 7 prefer prefer VBP cord-293966-5c466xvz 153 8 Invitrogen Invitrogen NNP cord-293966-5c466xvz 153 9 as as IN cord-293966-5c466xvz 153 10 a a DT cord-293966-5c466xvz 153 11 supplier supplier NN cord-293966-5c466xvz 153 12 , , , cord-293966-5c466xvz 153 13 as as IN cord-293966-5c466xvz 153 14 they -PRON- PRP cord-293966-5c466xvz 153 15 can can MD cord-293966-5c466xvz 153 16 provide provide VB cord-293966-5c466xvz 153 17 oligos oligo NNS cord-293966-5c466xvz 153 18 up up IN cord-293966-5c466xvz 153 19 to to TO cord-293966-5c466xvz 153 20 100 100 CD cord-293966-5c466xvz 153 21 nt nt RB cord-293966-5c466xvz 153 22 at at IN cord-293966-5c466xvz 153 23 their -PRON- PRP$ cord-293966-5c466xvz 153 24 standard standard JJ cord-293966-5c466xvz 153 25 price price NN cord-293966-5c466xvz 153 26 per per IN cord-293966-5c466xvz 153 27 base base NN cord-293966-5c466xvz 153 28 . . . cord-293966-5c466xvz 154 1 Many many JJ cord-293966-5c466xvz 154 2 companies company NNS cord-293966-5c466xvz 154 3 do do VBP cord-293966-5c466xvz 154 4 not not RB cord-293966-5c466xvz 154 5 make make VB cord-293966-5c466xvz 154 6 oligos oligo NNS cord-293966-5c466xvz 154 7 longer long RBR cord-293966-5c466xvz 154 8 than than IN cord-293966-5c466xvz 154 9 60 60 CD cord-293966-5c466xvz 154 10 nt nt RB cord-293966-5c466xvz 154 11 at at IN cord-293966-5c466xvz 154 12 their -PRON- PRP$ cord-293966-5c466xvz 154 13 standard standard JJ cord-293966-5c466xvz 154 14 rates rate NNS cord-293966-5c466xvz 154 15 , , , cord-293966-5c466xvz 154 16 and and CC cord-293966-5c466xvz 154 17 thus thus RB cord-293966-5c466xvz 154 18 will will MD cord-293966-5c466xvz 154 19 charge charge VB cord-293966-5c466xvz 154 20 a a DT cord-293966-5c466xvz 154 21 significant significant JJ cord-293966-5c466xvz 154 22 amount amount NN cord-293966-5c466xvz 154 23 more more JJR cord-293966-5c466xvz 154 24 for for IN cord-293966-5c466xvz 154 25 the the DT cord-293966-5c466xvz 154 26 80 80 CD cord-293966-5c466xvz 154 27 - - SYM cord-293966-5c466xvz 154 28 90 90 CD cord-293966-5c466xvz 154 29 nt nt NN cord-293966-5c466xvz 154 30 oligos oligo NNS cord-293966-5c466xvz 154 31 required require VBN cord-293966-5c466xvz 154 32 for for IN cord-293966-5c466xvz 154 33 this this DT cord-293966-5c466xvz 154 34 protocol protocol NN cord-293966-5c466xvz 154 35 . . . cord-293966-5c466xvz 155 1 4 4 LS cord-293966-5c466xvz 155 2 . . . cord-293966-5c466xvz 156 1 While while IN cord-293966-5c466xvz 156 2 many many JJ cord-293966-5c466xvz 156 3 companies company NNS cord-293966-5c466xvz 156 4 sell sell VBP cord-293966-5c466xvz 156 5 BAC BAC NNP cord-293966-5c466xvz 156 6 - - HYPH cord-293966-5c466xvz 156 7 prep prep NN cord-293966-5c466xvz 156 8 kits kit NNS cord-293966-5c466xvz 156 9 which which WDT cord-293966-5c466xvz 156 10 will will MD cord-293966-5c466xvz 156 11 work work VB cord-293966-5c466xvz 156 12 for for IN cord-293966-5c466xvz 156 13 these these DT cord-293966-5c466xvz 156 14 purposes purpose NNS cord-293966-5c466xvz 156 15 , , , cord-293966-5c466xvz 156 16 these these DT cord-293966-5c466xvz 156 17 columns column NNS cord-293966-5c466xvz 156 18 are be VBP cord-293966-5c466xvz 156 19 often often RB cord-293966-5c466xvz 156 20 at at IN cord-293966-5c466xvz 156 21 least least JJS cord-293966-5c466xvz 156 22 3Â 3â CD cord-293966-5c466xvz 156 23 the the DT cord-293966-5c466xvz 156 24 cost cost NN cord-293966-5c466xvz 156 25 of of IN cord-293966-5c466xvz 156 26 the the DT cord-293966-5c466xvz 156 27 Nucleobond Nucleobond NNP cord-293966-5c466xvz 156 28 Xtra Xtra NNP cord-293966-5c466xvz 156 29 Midi Midi NNP cord-293966-5c466xvz 156 30 Kit kit NN cord-293966-5c466xvz 156 31 . . . cord-293966-5c466xvz 157 1 We -PRON- PRP cord-293966-5c466xvz 157 2 have have VBP cord-293966-5c466xvz 157 3 tested test VBN cord-293966-5c466xvz 157 4 the the DT cord-293966-5c466xvz 157 5 Xtra Xtra NNP cord-293966-5c466xvz 157 6 Midi Midi NNP cord-293966-5c466xvz 157 7 Kit kit NN cord-293966-5c466xvz 157 8 side side NN cord-293966-5c466xvz 157 9 by by IN cord-293966-5c466xvz 157 10 side side NN cord-293966-5c466xvz 157 11 with with IN cord-293966-5c466xvz 157 12 a a DT cord-293966-5c466xvz 157 13 BAC BAC NNP cord-293966-5c466xvz 157 14 - - HYPH cord-293966-5c466xvz 157 15 prep prep NN cord-293966-5c466xvz 157 16 kit kit NN cord-293966-5c466xvz 157 17 and and CC cord-293966-5c466xvz 157 18 found find VBD cord-293966-5c466xvz 157 19 little little JJ cord-293966-5c466xvz 157 20 to to IN cord-293966-5c466xvz 157 21 no no DT cord-293966-5c466xvz 157 22 difference difference NN cord-293966-5c466xvz 157 23 in in IN cord-293966-5c466xvz 157 24 CoV CoV NNP cord-293966-5c466xvz 157 25 BAC BAC NNP cord-293966-5c466xvz 157 26 DNA DNA NNP cord-293966-5c466xvz 157 27 yield yield NN cord-293966-5c466xvz 157 28 . . . cord-293966-5c466xvz 158 1 5 5 LS cord-293966-5c466xvz 158 2 . . . cord-293966-5c466xvz 159 1 For for IN cord-293966-5c466xvz 159 2 purifying purify VBG cord-293966-5c466xvz 159 3 PCR PCR NNP cord-293966-5c466xvz 159 4 products product NNS cord-293966-5c466xvz 159 5 , , , cord-293966-5c466xvz 159 6 we -PRON- PRP cord-293966-5c466xvz 159 7 prefer prefer VBP cord-293966-5c466xvz 159 8 the the DT cord-293966-5c466xvz 159 9 Invitrogen Invitrogen NNP cord-293966-5c466xvz 159 10 Pure Pure NNP cord-293966-5c466xvz 159 11 - - HYPH cord-293966-5c466xvz 159 12 Link link NN cord-293966-5c466xvz 159 13 PCR PCR NNP cord-293966-5c466xvz 159 14 Purification Purification NNP cord-293966-5c466xvz 159 15 Kit Kit NNP cord-293966-5c466xvz 159 16 because because IN cord-293966-5c466xvz 159 17 it -PRON- PRP cord-293966-5c466xvz 159 18 includes include VBZ cord-293966-5c466xvz 159 19 a a DT cord-293966-5c466xvz 159 20 buffer buffer NN cord-293966-5c466xvz 159 21 that that WDT cord-293966-5c466xvz 159 22 allows allow VBZ cord-293966-5c466xvz 159 23 DNA dna NN cord-293966-5c466xvz 159 24 products product NNS cord-293966-5c466xvz 159 25 of of IN cord-293966-5c466xvz 159 26 < < NNP cord-293966-5c466xvz 159 27 300 300 CD cord-293966-5c466xvz 159 28 bp bp NNP cord-293966-5c466xvz 159 29 to to TO cord-293966-5c466xvz 159 30 go go VB cord-293966-5c466xvz 159 31 through through IN cord-293966-5c466xvz 159 32 the the DT cord-293966-5c466xvz 159 33 column column NN cord-293966-5c466xvz 159 34 . . . cord-293966-5c466xvz 160 1 This this DT cord-293966-5c466xvz 160 2 helps help VBZ cord-293966-5c466xvz 160 3 remove remove VB cord-293966-5c466xvz 160 4 primer primer NN cord-293966-5c466xvz 160 5 dimers dimer NNS cord-293966-5c466xvz 160 6 from from IN cord-293966-5c466xvz 160 7 the the DT cord-293966-5c466xvz 160 8 PCR PCR NNP cord-293966-5c466xvz 160 9 reaction reaction NN cord-293966-5c466xvz 160 10 that that WDT cord-293966-5c466xvz 160 11 could could MD cord-293966-5c466xvz 160 12 interfere interfere VB cord-293966-5c466xvz 160 13 with with IN cord-293966-5c466xvz 160 14 recombination recombination NN cord-293966-5c466xvz 160 15 . . . cord-293966-5c466xvz 161 1 6 6 LS cord-293966-5c466xvz 161 2 . . . cord-293966-5c466xvz 162 1 A a DT cord-293966-5c466xvz 162 2 42 42 CD cord-293966-5c466xvz 162 3 C c NN cord-293966-5c466xvz 162 4 shaking shake VBG cord-293966-5c466xvz 162 5 water water NN cord-293966-5c466xvz 162 6 bath bath NN cord-293966-5c466xvz 162 7 is be VBZ cord-293966-5c466xvz 162 8 essential essential JJ cord-293966-5c466xvz 162 9 for for IN cord-293966-5c466xvz 162 10 this this DT cord-293966-5c466xvz 162 11 procedure procedure NN cord-293966-5c466xvz 162 12 . . . cord-293966-5c466xvz 163 1 The the DT cord-293966-5c466xvz 163 2 bacterial bacterial JJ cord-293966-5c466xvz 163 3 cultures culture NNS cord-293966-5c466xvz 163 4 need need VBP cord-293966-5c466xvz 163 5 to to TO cord-293966-5c466xvz 163 6 heat heat VB cord-293966-5c466xvz 163 7 up up RP cord-293966-5c466xvz 163 8 to to TO cord-293966-5c466xvz 163 9 42 42 CD cord-293966-5c466xvz 163 10 C c NN cord-293966-5c466xvz 163 11 quickly quickly RB cord-293966-5c466xvz 163 12 to to TO cord-293966-5c466xvz 163 13 properly properly RB cord-293966-5c466xvz 163 14 induce induce VB cord-293966-5c466xvz 163 15 the the DT cord-293966-5c466xvz 163 16 Red red JJ cord-293966-5c466xvz 163 17 enzymes enzyme NNS cord-293966-5c466xvz 163 18 . . . cord-293966-5c466xvz 164 1 A a DT cord-293966-5c466xvz 164 2 shaking shake VBG cord-293966-5c466xvz 164 3 water water NN cord-293966-5c466xvz 164 4 bath bath NN cord-293966-5c466xvz 164 5 is be VBZ cord-293966-5c466xvz 164 6 significantly significantly RB cord-293966-5c466xvz 164 7 better well JJR cord-293966-5c466xvz 164 8 than than IN cord-293966-5c466xvz 164 9 a a DT cord-293966-5c466xvz 164 10 regular regular JJ cord-293966-5c466xvz 164 11 shaking shake VBG cord-293966-5c466xvz 164 12 incubator incubator NN cord-293966-5c466xvz 164 13 at at IN cord-293966-5c466xvz 164 14 quickly quickly RB cord-293966-5c466xvz 164 15 transferring transfer VBG cord-293966-5c466xvz 164 16 heat heat NN cord-293966-5c466xvz 164 17 to to IN cord-293966-5c466xvz 164 18 the the DT cord-293966-5c466xvz 164 19 bacterial bacterial JJ cord-293966-5c466xvz 164 20 culture culture NN cord-293966-5c466xvz 164 21 . . . cord-293966-5c466xvz 165 1 7 7 CD cord-293966-5c466xvz 165 2 . . . cord-293966-5c466xvz 166 1 We -PRON- PRP cord-293966-5c466xvz 166 2 have have VBP cord-293966-5c466xvz 166 3 tried try VBN cord-293966-5c466xvz 166 4 several several JJ cord-293966-5c466xvz 166 5 different different JJ cord-293966-5c466xvz 166 6 transfection transfection NN cord-293966-5c466xvz 166 7 reagents reagent NNS cord-293966-5c466xvz 166 8 , , , cord-293966-5c466xvz 166 9 and and CC cord-293966-5c466xvz 166 10 Lipofectamine Lipofectamine NNP cord-293966-5c466xvz 166 11 2000 2000 CD cord-293966-5c466xvz 166 12 has have VBZ cord-293966-5c466xvz 166 13 worked work VBN cord-293966-5c466xvz 166 14 the the DT cord-293966-5c466xvz 166 15 best good JJS cord-293966-5c466xvz 166 16 for for IN cord-293966-5c466xvz 166 17 us -PRON- PRP cord-293966-5c466xvz 166 18 . . . cord-293966-5c466xvz 167 1 That that DT cord-293966-5c466xvz 167 2 does do VBZ cord-293966-5c466xvz 167 3 not not RB cord-293966-5c466xvz 167 4 mean mean VB cord-293966-5c466xvz 167 5 other other JJ cord-293966-5c466xvz 167 6 transfection transfection NN cord-293966-5c466xvz 167 7 reagents reagent NNS cord-293966-5c466xvz 167 8 wo will MD cord-293966-5c466xvz 167 9 n't not RB cord-293966-5c466xvz 167 10 work work VB cord-293966-5c466xvz 167 11 , , , cord-293966-5c466xvz 167 12 feel feel VB cord-293966-5c466xvz 167 13 free free JJ cord-293966-5c466xvz 167 14 to to TO cord-293966-5c466xvz 167 15 try try VB cord-293966-5c466xvz 167 16 whichever whichever WDT cord-293966-5c466xvz 167 17 reagent reagent NN cord-293966-5c466xvz 167 18 you -PRON- PRP cord-293966-5c466xvz 167 19 prefer prefer VBP cord-293966-5c466xvz 167 20 . . . cord-293966-5c466xvz 168 1 8 8 CD cord-293966-5c466xvz 168 2 . . . cord-293966-5c466xvz 169 1 It -PRON- PRP cord-293966-5c466xvz 169 2 is be VBZ cord-293966-5c466xvz 169 3 important important JJ cord-293966-5c466xvz 169 4 to to TO cord-293966-5c466xvz 169 5 always always RB cord-293966-5c466xvz 169 6 culture culture NN cord-293966-5c466xvz 169 7 GS1783 GS1783 NNP cord-293966-5c466xvz 169 8 cells cell NNS cord-293966-5c466xvz 169 9 at at IN cord-293966-5c466xvz 169 10 32 32 CD cord-293966-5c466xvz 169 11 C c NN cord-293966-5c466xvz 169 12 or or CC cord-293966-5c466xvz 169 13 lower low JJR cord-293966-5c466xvz 169 14 due due IN cord-293966-5c466xvz 169 15 to to IN cord-293966-5c466xvz 169 16 the the DT cord-293966-5c466xvz 169 17 potential potential NN cord-293966-5c466xvz 169 18 for for IN cord-293966-5c466xvz 169 19 leaky leaky JJ cord-293966-5c466xvz 169 20 expression expression NN cord-293966-5c466xvz 169 21 of of IN cord-293966-5c466xvz 169 22 the the DT cord-293966-5c466xvz 169 23 Red red JJ cord-293966-5c466xvz 169 24 enzymes enzyme NNS cord-293966-5c466xvz 169 25 at at IN cord-293966-5c466xvz 169 26 temperatures temperature NNS cord-293966-5c466xvz 169 27 below below IN cord-293966-5c466xvz 169 28 the the DT cord-293966-5c466xvz 169 29 induction induction NN cord-293966-5c466xvz 169 30 temperature temperature NN cord-293966-5c466xvz 169 31 of of IN cord-293966-5c466xvz 169 32 42 42 CD cord-293966-5c466xvz 169 33 C. C. NNP cord-293966-5c466xvz 169 34 9 9 CD cord-293966-5c466xvz 169 35 . . . cord-293966-5c466xvz 170 1 Some some DT cord-293966-5c466xvz 170 2 shaking shake VBG cord-293966-5c466xvz 170 3 water water NN cord-293966-5c466xvz 170 4 baths bath NNS cord-293966-5c466xvz 170 5 can can MD cord-293966-5c466xvz 170 6 not not RB cord-293966-5c466xvz 170 7 shake shake VB cord-293966-5c466xvz 170 8 at at IN cord-293966-5c466xvz 170 9 200 200 CD cord-293966-5c466xvz 170 10 rpm rpm NN cord-293966-5c466xvz 170 11 ; ; : cord-293966-5c466xvz 170 12 if if IN cord-293966-5c466xvz 170 13 this this DT cord-293966-5c466xvz 170 14 is be VBZ cord-293966-5c466xvz 170 15 the the DT cord-293966-5c466xvz 170 16 case case NN cord-293966-5c466xvz 170 17 , , , cord-293966-5c466xvz 170 18 simply simply RB cord-293966-5c466xvz 170 19 shake shake VB cord-293966-5c466xvz 170 20 at at IN cord-293966-5c466xvz 170 21 a a DT cord-293966-5c466xvz 170 22 reasonable reasonable JJ cord-293966-5c466xvz 170 23 speed speed NN cord-293966-5c466xvz 170 24 for for IN cord-293966-5c466xvz 170 25 the the DT cord-293966-5c466xvz 170 26 shaker shaker NN cord-293966-5c466xvz 170 27 . . . cord-293966-5c466xvz 171 1 10 10 CD cord-293966-5c466xvz 171 2 . . . cord-293966-5c466xvz 172 1 We -PRON- PRP cord-293966-5c466xvz 172 2 have have VBP cord-293966-5c466xvz 172 3 occasionally occasionally RB cord-293966-5c466xvz 172 4 had have VBN cord-293966-5c466xvz 172 5 problems problem NNS cord-293966-5c466xvz 172 6 obtaining obtain VBG cord-293966-5c466xvz 172 7 a a DT cord-293966-5c466xvz 172 8 PCR PCR NNP cord-293966-5c466xvz 172 9 product product NN cord-293966-5c466xvz 172 10 when when WRB cord-293966-5c466xvz 172 11 using use VBG cord-293966-5c466xvz 172 12 the the DT cord-293966-5c466xvz 172 13 manufacturer manufacturer NN cord-293966-5c466xvz 172 14 recommended recommend VBD cord-293966-5c466xvz 172 15 0.5 0.5 CD cord-293966-5c466xvz 172 16 μL μl NN cord-293966-5c466xvz 172 17 of of IN cord-293966-5c466xvz 172 18 highfidelity highfidelity NN cord-293966-5c466xvz 172 19 polymerase polymerase NN cord-293966-5c466xvz 172 20 . . . cord-293966-5c466xvz 173 1 Using use VBG cord-293966-5c466xvz 173 2 1 1 CD cord-293966-5c466xvz 173 3 μL μl NN cord-293966-5c466xvz 173 4 of of IN cord-293966-5c466xvz 173 5 polymerase polymerase NN cord-293966-5c466xvz 173 6 provides provide VBZ cord-293966-5c466xvz 173 7 more more RBR cord-293966-5c466xvz 173 8 consistent consistent JJ cord-293966-5c466xvz 173 9 results result NNS cord-293966-5c466xvz 173 10 . . . cord-293966-5c466xvz 174 1 11 11 CD cord-293966-5c466xvz 174 2 . . . cord-293966-5c466xvz 175 1 Unlike unlike IN cord-293966-5c466xvz 175 2 a a DT cord-293966-5c466xvz 175 3 typical typical JJ cord-293966-5c466xvz 175 4 1 1 CD cord-293966-5c466xvz 175 5 h h NN cord-293966-5c466xvz 175 6 recovery recovery NN cord-293966-5c466xvz 175 7 following follow VBG cord-293966-5c466xvz 175 8 electroporation electroporation NN cord-293966-5c466xvz 175 9 , , , cord-293966-5c466xvz 175 10 it -PRON- PRP cord-293966-5c466xvz 175 11 is be VBZ cord-293966-5c466xvz 175 12 important important JJ cord-293966-5c466xvz 175 13 to to TO cord-293966-5c466xvz 175 14 incubate incubate VB cord-293966-5c466xvz 175 15 these these DT cord-293966-5c466xvz 175 16 cultures culture NNS cord-293966-5c466xvz 175 17 for for IN cord-293966-5c466xvz 175 18 several several JJ cord-293966-5c466xvz 175 19 hours hour NNS cord-293966-5c466xvz 175 20 in in IN cord-293966-5c466xvz 175 21 SOC SOC NNP cord-293966-5c466xvz 175 22 to to TO cord-293966-5c466xvz 175 23 allow allow VB cord-293966-5c466xvz 175 24 time time NN cord-293966-5c466xvz 175 25 for for IN cord-293966-5c466xvz 175 26 recombination recombination NN cord-293966-5c466xvz 175 27 to to TO cord-293966-5c466xvz 175 28 occur occur VB cord-293966-5c466xvz 175 29 . . . cord-293966-5c466xvz 176 1 A a DT cord-293966-5c466xvz 176 2 recovery recovery NN cord-293966-5c466xvz 176 3 time time NN cord-293966-5c466xvz 176 4 of of IN cord-293966-5c466xvz 176 5 5 5 CD cord-293966-5c466xvz 176 6 h h NN cord-293966-5c466xvz 176 7 or or CC cord-293966-5c466xvz 176 8 greater great JJR cord-293966-5c466xvz 176 9 is be VBZ cord-293966-5c466xvz 176 10 preferred prefer VBN cord-293966-5c466xvz 176 11 , , , cord-293966-5c466xvz 176 12 with with IN cord-293966-5c466xvz 176 13 a a DT cord-293966-5c466xvz 176 14 minimal minimal JJ cord-293966-5c466xvz 176 15 recovery recovery NN cord-293966-5c466xvz 176 16 time time NN cord-293966-5c466xvz 176 17 being be VBG cord-293966-5c466xvz 176 18 3 3 CD cord-293966-5c466xvz 176 19 h. h. NN cord-293966-5c466xvz 176 20 12 12 CD cord-293966-5c466xvz 176 21 . . . cord-293966-5c466xvz 177 1 Occasionally occasionally RB cord-293966-5c466xvz 177 2 , , , cord-293966-5c466xvz 177 3 we -PRON- PRP cord-293966-5c466xvz 177 4 find find VBP cord-293966-5c466xvz 177 5 that that IN cord-293966-5c466xvz 177 6 following follow VBG cord-293966-5c466xvz 177 7 PCR PCR NNP cord-293966-5c466xvz 177 8 some some DT cord-293966-5c466xvz 177 9 clones clone NNS cord-293966-5c466xvz 177 10 have have VBP cord-293966-5c466xvz 177 11 bands band NNS cord-293966-5c466xvz 177 12 that that WDT cord-293966-5c466xvz 177 13 correspond correspond VBP cord-293966-5c466xvz 177 14 to to IN cord-293966-5c466xvz 177 15 both both CC cord-293966-5c466xvz 177 16 the the DT cord-293966-5c466xvz 177 17 WT WT NNP cord-293966-5c466xvz 177 18 BAC BAC NNP cord-293966-5c466xvz 177 19 and and CC cord-293966-5c466xvz 177 20 the the DT cord-293966-5c466xvz 177 21 desired desire VBN cord-293966-5c466xvz 177 22 Kan Kan NNP cord-293966-5c466xvz 177 23 R R NNP cord-293966-5c466xvz 177 24 -I -I NNP cord-293966-5c466xvz 177 25 - - : cord-293966-5c466xvz 177 26 SceI SceI NNP cord-293966-5c466xvz 177 27 insert insert VB cord-293966-5c466xvz 177 28 BAC BAC NNP cord-293966-5c466xvz 177 29 . . . cord-293966-5c466xvz 178 1 It -PRON- PRP cord-293966-5c466xvz 178 2 is be VBZ cord-293966-5c466xvz 178 3 likely likely JJ cord-293966-5c466xvz 178 4 due due IN cord-293966-5c466xvz 178 5 to to IN cord-293966-5c466xvz 178 6 at at RB cord-293966-5c466xvz 178 7 least least RBS cord-293966-5c466xvz 178 8 two two CD cord-293966-5c466xvz 178 9 copies copy NNS cord-293966-5c466xvz 178 10 of of IN cord-293966-5c466xvz 178 11 BAC BAC NNP cord-293966-5c466xvz 178 12 DNA DNA NNP cord-293966-5c466xvz 178 13 being be VBG cord-293966-5c466xvz 178 14 present present JJ cord-293966-5c466xvz 178 15 in in IN cord-293966-5c466xvz 178 16 the the DT cord-293966-5c466xvz 178 17 same same JJ cord-293966-5c466xvz 178 18 cell cell NN cord-293966-5c466xvz 178 19 . . . cord-293966-5c466xvz 179 1 Unless unless IN cord-293966-5c466xvz 179 2 the the DT cord-293966-5c466xvz 179 3 molar molar JJ cord-293966-5c466xvz 179 4 ratio ratio NN cord-293966-5c466xvz 179 5 of of IN cord-293966-5c466xvz 179 6 the the DT cord-293966-5c466xvz 179 7 Kan Kan NNP cord-293966-5c466xvz 179 8 R R NNP cord-293966-5c466xvz 179 9 -I -I NNP cord-293966-5c466xvz 179 10 - - : cord-293966-5c466xvz 179 11 SceI SceI NNP cord-293966-5c466xvz 179 12 insert insert NN cord-293966-5c466xvz 179 13 to to IN cord-293966-5c466xvz 179 14 the the DT cord-293966-5c466xvz 179 15 WT WT NNP cord-293966-5c466xvz 179 16 BAC BAC NNP cord-293966-5c466xvz 179 17 is be VBZ cord-293966-5c466xvz 179 18 very very RB cord-293966-5c466xvz 179 19 large large JJ cord-293966-5c466xvz 179 20 , , , cord-293966-5c466xvz 179 21 these these DT cord-293966-5c466xvz 179 22 clones clone NNS cord-293966-5c466xvz 179 23 should should MD cord-293966-5c466xvz 179 24 be be VB cord-293966-5c466xvz 179 25 avoided avoid VBN cord-293966-5c466xvz 179 26 . . . cord-293966-5c466xvz 180 1 13 13 CD cord-293966-5c466xvz 180 2 . . . cord-293966-5c466xvz 181 1 After after IN cord-293966-5c466xvz 181 2 positive positive JJ cord-293966-5c466xvz 181 3 selection selection NN cord-293966-5c466xvz 181 4 , , , cord-293966-5c466xvz 181 5 we -PRON- PRP cord-293966-5c466xvz 181 6 do do VBP cord-293966-5c466xvz 181 7 not not RB cord-293966-5c466xvz 181 8 check check VB cord-293966-5c466xvz 181 9 the the DT cord-293966-5c466xvz 181 10 BAC BAC NNP cord-293966-5c466xvz 181 11 by by IN cord-293966-5c466xvz 181 12 restriction restriction NN cord-293966-5c466xvz 181 13 digest digest NN cord-293966-5c466xvz 181 14 , , , cord-293966-5c466xvz 181 15 because because IN cord-293966-5c466xvz 181 16 ( ( -LRB- cord-293966-5c466xvz 181 17 a a LS cord-293966-5c466xvz 181 18 ) ) -RRB- cord-293966-5c466xvz 181 19 we -PRON- PRP cord-293966-5c466xvz 181 20 find find VBP cord-293966-5c466xvz 181 21 that that IN cord-293966-5c466xvz 181 22 in in IN cord-293966-5c466xvz 181 23 many many JJ cord-293966-5c466xvz 181 24 cases case NNS cord-293966-5c466xvz 181 25 the the DT cord-293966-5c466xvz 181 26 amount amount NN cord-293966-5c466xvz 181 27 of of IN cord-293966-5c466xvz 181 28 BAC BAC NNP cord-293966-5c466xvz 181 29 DNA DNA NNP cord-293966-5c466xvz 181 30 from from IN cord-293966-5c466xvz 181 31 a a DT cord-293966-5c466xvz 181 32 miniprep miniprep NN cord-293966-5c466xvz 181 33 is be VBZ cord-293966-5c466xvz 181 34 insufficient insufficient JJ cord-293966-5c466xvz 181 35 for for IN cord-293966-5c466xvz 181 36 a a DT cord-293966-5c466xvz 181 37 readable readable JJ cord-293966-5c466xvz 181 38 digest digest NN cord-293966-5c466xvz 181 39 , , , cord-293966-5c466xvz 181 40 and and CC cord-293966-5c466xvz 181 41 ( ( -LRB- cord-293966-5c466xvz 181 42 b b LS cord-293966-5c466xvz 181 43 ) ) -RRB- cord-293966-5c466xvz 181 44 we -PRON- PRP cord-293966-5c466xvz 181 45 find find VBP cord-293966-5c466xvz 181 46 that that IN cord-293966-5c466xvz 181 47 the the DT cord-293966-5c466xvz 181 48 colonies colony NNS cord-293966-5c466xvz 181 49 that that WDT cord-293966-5c466xvz 181 50 pass pass VBP cord-293966-5c466xvz 181 51 the the DT cord-293966-5c466xvz 181 52 replica replica NN cord-293966-5c466xvz 181 53 plating plating NN cord-293966-5c466xvz 181 54 and and CC cord-293966-5c466xvz 181 55 PCR PCR NNP cord-293966-5c466xvz 181 56 tests test NNS cord-293966-5c466xvz 181 57 rarely rarely RB cord-293966-5c466xvz 181 58 if if IN cord-293966-5c466xvz 181 59 ever ever RB cord-293966-5c466xvz 181 60 have have VBP cord-293966-5c466xvz 181 61 any any DT cord-293966-5c466xvz 181 62 significant significant JJ cord-293966-5c466xvz 181 63 problems problem NNS cord-293966-5c466xvz 181 64 concerning concern VBG cord-293966-5c466xvz 181 65 removing remove VBG cord-293966-5c466xvz 181 66 or or CC cord-293966-5c466xvz 181 67 duplicating duplicate VBG cord-293966-5c466xvz 181 68 regions region NNS cord-293966-5c466xvz 181 69 of of IN cord-293966-5c466xvz 181 70 the the DT cord-293966-5c466xvz 181 71 MERS MERS NNP cord-293966-5c466xvz 181 72 - - HYPH cord-293966-5c466xvz 181 73 CoV CoV NNP cord-293966-5c466xvz 181 74 BAC BAC NNP cord-293966-5c466xvz 181 75 DNA DNA NNP cord-293966-5c466xvz 181 76 . . . cord-293966-5c466xvz 182 1 14 14 CD cord-293966-5c466xvz 182 2 . . . cord-293966-5c466xvz 183 1 First first RB cord-293966-5c466xvz 183 2 , , , cord-293966-5c466xvz 183 3 colonies colony NNS cord-293966-5c466xvz 183 4 may may MD cord-293966-5c466xvz 183 5 take take VB cord-293966-5c466xvz 183 6 over over RP cord-293966-5c466xvz 183 7 1 1 CD cord-293966-5c466xvz 183 8 day day NN cord-293966-5c466xvz 183 9 before before IN cord-293966-5c466xvz 183 10 they -PRON- PRP cord-293966-5c466xvz 183 11 are be VBP cord-293966-5c466xvz 183 12 visible visible JJ cord-293966-5c466xvz 183 13 . . . cord-293966-5c466xvz 184 1 Second second RB cord-293966-5c466xvz 184 2 , , , cord-293966-5c466xvz 184 3 while while IN cord-293966-5c466xvz 184 4 the the DT cord-293966-5c466xvz 184 5 efficiency efficiency NN cord-293966-5c466xvz 184 6 of of IN cord-293966-5c466xvz 184 7 the the DT cord-293966-5c466xvz 184 8 negative negative JJ cord-293966-5c466xvz 184 9 selection selection NN cord-293966-5c466xvz 184 10 can can MD cord-293966-5c466xvz 184 11 be be VB cord-293966-5c466xvz 184 12 very very RB cord-293966-5c466xvz 184 13 low low JJ cord-293966-5c466xvz 184 14 , , , cord-293966-5c466xvz 184 15 any any DT cord-293966-5c466xvz 184 16 colonies colony NNS cord-293966-5c466xvz 184 17 that that WDT cord-293966-5c466xvz 184 18 have have VBP cord-293966-5c466xvz 184 19 grown grow VBN cord-293966-5c466xvz 184 20 on on IN cord-293966-5c466xvz 184 21 LB LB NNP cord-293966-5c466xvz 184 22 - - HYPH cord-293966-5c466xvz 184 23 cml cml NNP cord-293966-5c466xvz 184 24 plates plate NNS cord-293966-5c466xvz 184 25 but but CC cord-293966-5c466xvz 184 26 do do VBP cord-293966-5c466xvz 184 27 not not RB cord-293966-5c466xvz 184 28 grow grow VB cord-293966-5c466xvz 184 29 on on IN cord-293966-5c466xvz 184 30 LB LB NNP cord-293966-5c466xvz 184 31 - - HYPH cord-293966-5c466xvz 184 32 cml cml NNP cord-293966-5c466xvz 184 33 / / SYM cord-293966-5c466xvz 184 34 kan kan NNP cord-293966-5c466xvz 184 35 plates plate NNS cord-293966-5c466xvz 184 36 are be VBP cord-293966-5c466xvz 184 37 very very RB cord-293966-5c466xvz 184 38 likely likely RB cord-293966-5c466xvz 184 39 correct correct JJ cord-293966-5c466xvz 184 40 . . . cord-293966-5c466xvz 185 1 Therefore therefore RB cord-293966-5c466xvz 185 2 , , , cord-293966-5c466xvz 185 3 we -PRON- PRP cord-293966-5c466xvz 185 4 go go VBP cord-293966-5c466xvz 185 5 directly directly RB cord-293966-5c466xvz 185 6 to to IN cord-293966-5c466xvz 185 7 starting start VBG cord-293966-5c466xvz 185 8 large large JJ cord-293966-5c466xvz 185 9 - - HYPH cord-293966-5c466xvz 185 10 scale scale NN cord-293966-5c466xvz 185 11 cultures culture NNS cord-293966-5c466xvz 185 12 for for IN cord-293966-5c466xvz 185 13 these these DT cord-293966-5c466xvz 185 14 clones clone NNS cord-293966-5c466xvz 185 15 . . . cord-293966-5c466xvz 186 1 That that DT cord-293966-5c466xvz 186 2 way way NN cord-293966-5c466xvz 186 3 we -PRON- PRP cord-293966-5c466xvz 186 4 can can MD cord-293966-5c466xvz 186 5 do do VB cord-293966-5c466xvz 186 6 the the DT cord-293966-5c466xvz 186 7 final final JJ cord-293966-5c466xvz 186 8 diagnostic diagnostic JJ cord-293966-5c466xvz 186 9 tests test NNS cord-293966-5c466xvz 186 10 and and CC cord-293966-5c466xvz 186 11 we -PRON- PRP cord-293966-5c466xvz 186 12 can can MD cord-293966-5c466xvz 186 13 prepare prepare VB cord-293966-5c466xvz 186 14 for for IN cord-293966-5c466xvz 186 15 the the DT cord-293966-5c466xvz 186 16 BAC BAC NNP cord-293966-5c466xvz 186 17 transfection transfection NN cord-293966-5c466xvz 186 18 and and CC cord-293966-5c466xvz 186 19 viral viral JJ cord-293966-5c466xvz 186 20 recovery recovery NN cord-293966-5c466xvz 186 21 at at IN cord-293966-5c466xvz 186 22 the the DT cord-293966-5c466xvz 186 23 same same JJ cord-293966-5c466xvz 186 24 time time NN cord-293966-5c466xvz 186 25 . . . cord-293966-5c466xvz 187 1 15 15 CD cord-293966-5c466xvz 187 2 . . . cord-293966-5c466xvz 188 1 A a DT cord-293966-5c466xvz 188 2 KpnI KpnI NNP cord-293966-5c466xvz 188 3 digest digest NN cord-293966-5c466xvz 188 4 of of IN cord-293966-5c466xvz 188 5 pBAC pbac JJ cord-293966-5c466xvz 188 6 - - HYPH cord-293966-5c466xvz 188 7 MERS MERS NNP cord-293966-5c466xvz 188 8 - - HYPH cord-293966-5c466xvz 188 9 CoV cov NN cord-293966-5c466xvz 188 10 results result NNS cord-293966-5c466xvz 188 11 in in IN cord-293966-5c466xvz 188 12 DNA dna NN cord-293966-5c466xvz 188 13 fragments fragment NNS cord-293966-5c466xvz 188 14 of of IN cord-293966-5c466xvz 188 15 19.1 19.1 CD cord-293966-5c466xvz 188 16 , , , cord-293966-5c466xvz 188 17 13.8 13.8 CD cord-293966-5c466xvz 188 18 , , , cord-293966-5c466xvz 188 19 3.9 3.9 CD cord-293966-5c466xvz 188 20 , , , cord-293966-5c466xvz 188 21 and and CC cord-293966-5c466xvz 188 22 1.5 1.5 CD cord-293966-5c466xvz 188 23 kb kb NNS cord-293966-5c466xvz 188 24 . . . cord-293966-5c466xvz 189 1 We -PRON- PRP cord-293966-5c466xvz 189 2 have have VBP cord-293966-5c466xvz 189 3 found find VBN cord-293966-5c466xvz 189 4 this this DT cord-293966-5c466xvz 189 5 is be VBZ cord-293966-5c466xvz 189 6 the the DT cord-293966-5c466xvz 189 7 best good JJS cord-293966-5c466xvz 189 8 digest digest NN cord-293966-5c466xvz 189 9 for for IN cord-293966-5c466xvz 189 10 diagnostic diagnostic JJ cord-293966-5c466xvz 189 11 evaluation evaluation NN cord-293966-5c466xvz 189 12 of of IN cord-293966-5c466xvz 189 13 the the DT cord-293966-5c466xvz 189 14 MERS MERS NNP cord-293966-5c466xvz 189 15 - - HYPH cord-293966-5c466xvz 189 16 CoV cov NN cord-293966-5c466xvz 189 17 BAC BAC NNP cord-293966-5c466xvz 189 18 ; ; : cord-293966-5c466xvz 189 19 however however RB cord-293966-5c466xvz 189 20 other other JJ cord-293966-5c466xvz 189 21 enzymes enzyme NNS cord-293966-5c466xvz 189 22 or or CC cord-293966-5c466xvz 189 23 enzyme enzyme NN cord-293966-5c466xvz 189 24 combinations combination NNS cord-293966-5c466xvz 189 25 will will MD cord-293966-5c466xvz 189 26 work work VB cord-293966-5c466xvz 189 27 as as RB cord-293966-5c466xvz 189 28 well well RB cord-293966-5c466xvz 189 29 . . . cord-293966-5c466xvz 190 1 Be be VB cord-293966-5c466xvz 190 2 sure sure JJ cord-293966-5c466xvz 190 3 to to TO cord-293966-5c466xvz 190 4 use use VB cord-293966-5c466xvz 190 5 a a DT cord-293966-5c466xvz 190 6 low low JJ cord-293966-5c466xvz 190 7 - - HYPH cord-293966-5c466xvz 190 8 percentage percentage NN cord-293966-5c466xvz 190 9 agarose agarose NN cord-293966-5c466xvz 190 10 gel gel NN cord-293966-5c466xvz 190 11 to to TO cord-293966-5c466xvz 190 12 effectively effectively RB cord-293966-5c466xvz 190 13 separate separate VB cord-293966-5c466xvz 190 14 the the DT cord-293966-5c466xvz 190 15 large large JJ cord-293966-5c466xvz 190 16 DNA dna NN cord-293966-5c466xvz 190 17 molecules molecule NNS cord-293966-5c466xvz 190 18 . . . cord-293966-5c466xvz 191 1 16 16 CD cord-293966-5c466xvz 191 2 . . . cord-293966-5c466xvz 192 1 Other other JJ cord-293966-5c466xvz 192 2 laboratories laboratory NNS cord-293966-5c466xvz 192 3 use use VBP cord-293966-5c466xvz 192 4 BHK-21 BHK-21 NNP cord-293966-5c466xvz 192 5 cells cell NNS cord-293966-5c466xvz 192 6 for for IN cord-293966-5c466xvz 192 7 the the DT cord-293966-5c466xvz 192 8 initial initial JJ cord-293966-5c466xvz 192 9 transfection transfection NN cord-293966-5c466xvz 192 10 since since IN cord-293966-5c466xvz 192 11 these these DT cord-293966-5c466xvz 192 12 cells cell NNS cord-293966-5c466xvz 192 13 are be VBP cord-293966-5c466xvz 192 14 highly highly RB cord-293966-5c466xvz 192 15 transfectable transfectable JJ cord-293966-5c466xvz 192 16 . . . cord-293966-5c466xvz 193 1 The the DT cord-293966-5c466xvz 193 2 transfected transfecte VBN cord-293966-5c466xvz 193 3 cells cell NNS cord-293966-5c466xvz 193 4 can can MD cord-293966-5c466xvz 193 5 be be VB cord-293966-5c466xvz 193 6 overlaid overlay VBN cord-293966-5c466xvz 193 7 on on IN cord-293966-5c466xvz 193 8 the the DT cord-293966-5c466xvz 193 9 Vero-81 vero-81 NN cord-293966-5c466xvz 193 10 or or CC cord-293966-5c466xvz 193 11 Huh-7 Huh-7 NNP cord-293966-5c466xvz 193 12 cells cell NNS cord-293966-5c466xvz 193 13 for for IN cord-293966-5c466xvz 193 14 further further JJ cord-293966-5c466xvz 193 15 outgrowth outgrowth NN cord-293966-5c466xvz 193 16 of of IN cord-293966-5c466xvz 193 17 the the DT cord-293966-5c466xvz 193 18 recombinant recombinant JJ cord-293966-5c466xvz 193 19 virus virus NN cord-293966-5c466xvz 193 20 . . . cord-293966-5c466xvz 194 1 17 17 CD cord-293966-5c466xvz 194 2 . . . cord-293966-5c466xvz 195 1 It -PRON- PRP cord-293966-5c466xvz 195 2 is be VBZ cord-293966-5c466xvz 195 3 feasible feasible JJ cord-293966-5c466xvz 195 4 to to TO cord-293966-5c466xvz 195 5 wait wait VB cord-293966-5c466xvz 195 6 o o NN cord-293966-5c466xvz 195 7 / / SYM cord-293966-5c466xvz 195 8 n n NN cord-293966-5c466xvz 195 9 to to TO cord-293966-5c466xvz 195 10 change change VB cord-293966-5c466xvz 195 11 the the DT cord-293966-5c466xvz 195 12 media medium NNS cord-293966-5c466xvz 195 13 of of IN cord-293966-5c466xvz 195 14 the the DT cord-293966-5c466xvz 195 15 transfected transfecte VBN cord-293966-5c466xvz 195 16 Vero Vero NNP cord-293966-5c466xvz 195 17 81 81 CD cord-293966-5c466xvz 195 18 cells cell NNS cord-293966-5c466xvz 195 19 , , , cord-293966-5c466xvz 195 20 but but CC cord-293966-5c466xvz 195 21 this this DT cord-293966-5c466xvz 195 22 does do VBZ cord-293966-5c466xvz 195 23 result result VB cord-293966-5c466xvz 195 24 in in IN cord-293966-5c466xvz 195 25 an an DT cord-293966-5c466xvz 195 26 increase increase NN cord-293966-5c466xvz 195 27 in in IN cord-293966-5c466xvz 195 28 the the DT cord-293966-5c466xvz 195 29 cytotoxicity cytotoxicity NN cord-293966-5c466xvz 195 30 induced induce VBN cord-293966-5c466xvz 195 31 by by IN cord-293966-5c466xvz 195 32 Lipofectamine Lipofectamine NNP cord-293966-5c466xvz 195 33 . . . cord-293966-5c466xvz 196 1 This this DT cord-293966-5c466xvz 196 2 is be VBZ cord-293966-5c466xvz 196 3 not not RB cord-293966-5c466xvz 196 4 feasible feasible JJ cord-293966-5c466xvz 196 5 if if IN cord-293966-5c466xvz 196 6 you -PRON- PRP cord-293966-5c466xvz 196 7 are be VBP cord-293966-5c466xvz 196 8 using use VBG cord-293966-5c466xvz 196 9 Huh-7 Huh-7 NNP cord-293966-5c466xvz 196 10 cells cell NNS cord-293966-5c466xvz 196 11 . . . cord-293966-5c466xvz 197 1 18 18 CD cord-293966-5c466xvz 197 2 . . . cord-293966-5c466xvz 198 1 Mutant mutant JJ cord-293966-5c466xvz 198 2 viruses virus NNS cord-293966-5c466xvz 198 3 that that WDT cord-293966-5c466xvz 198 4 do do VBP cord-293966-5c466xvz 198 5 not not RB cord-293966-5c466xvz 198 6 replicate replicate VB cord-293966-5c466xvz 198 7 as as RB cord-293966-5c466xvz 198 8 well well RB cord-293966-5c466xvz 198 9 as as IN cord-293966-5c466xvz 198 10 WT WT NNP cord-293966-5c466xvz 198 11 virus virus NN cord-293966-5c466xvz 198 12 may may MD cord-293966-5c466xvz 198 13 require require VB cord-293966-5c466xvz 198 14 increased increased JJ cord-293966-5c466xvz 198 15 amounts amount NNS cord-293966-5c466xvz 198 16 of of IN cord-293966-5c466xvz 198 17 P0 p0 NN cord-293966-5c466xvz 198 18 virus virus NN cord-293966-5c466xvz 198 19 . . . cord-293966-5c466xvz 199 1 19 19 CD cord-293966-5c466xvz 199 2 . . . cord-293966-5c466xvz 200 1 It -PRON- PRP cord-293966-5c466xvz 200 2 is be VBZ cord-293966-5c466xvz 200 3 also also RB cord-293966-5c466xvz 200 4 beneficial beneficial JJ cord-293966-5c466xvz 200 5 to to TO cord-293966-5c466xvz 200 6 check check VB cord-293966-5c466xvz 200 7 the the DT cord-293966-5c466xvz 200 8 integrity integrity NN cord-293966-5c466xvz 200 9 of of IN cord-293966-5c466xvz 200 10 the the DT cord-293966-5c466xvz 200 11 entire entire JJ cord-293966-5c466xvz 200 12 MERS MERS NNP cord-293966-5c466xvz 200 13 - - HYPH cord-293966-5c466xvz 200 14 CoV cov NN cord-293966-5c466xvz 200 15 genome genome NN cord-293966-5c466xvz 200 16 by by IN cord-293966-5c466xvz 200 17 RT RT NNP cord-293966-5c466xvz 200 18 - - HYPH cord-293966-5c466xvz 200 19 PCR PCR NNP cord-293966-5c466xvz 200 20 after after IN cord-293966-5c466xvz 200 21 several several JJ cord-293966-5c466xvz 200 22 passages passage NNS cord-293966-5c466xvz 200 23 as as IN cord-293966-5c466xvz 200 24 MERS MERS NNP cord-293966-5c466xvz 200 25 - - HYPH cord-293966-5c466xvz 200 26 CoV CoV NNP cord-293966-5c466xvz 200 27 tends tend VBZ cord-293966-5c466xvz 200 28 to to TO cord-293966-5c466xvz 200 29 occasionally occasionally RB cord-293966-5c466xvz 200 30 delete delete VB cord-293966-5c466xvz 200 31 sections section NNS cord-293966-5c466xvz 200 32 of of IN cord-293966-5c466xvz 200 33 the the DT cord-293966-5c466xvz 200 34 accessory accessory NN cord-293966-5c466xvz 200 35 proteins protein NNS cord-293966-5c466xvz 200 36 . . . cord-293966-5c466xvz 201 1 Middle Middle NNP cord-293966-5c466xvz 201 2 East East NNP cord-293966-5c466xvz 201 3 respiratory respiratory JJ cord-293966-5c466xvz 201 4 syndrome syndrome NN cord-293966-5c466xvz 201 5 : : : cord-293966-5c466xvz 201 6 emergence emergence NN cord-293966-5c466xvz 201 7 of of IN cord-293966-5c466xvz 201 8 a a DT cord-293966-5c466xvz 201 9 pathogenic pathogenic JJ cord-293966-5c466xvz 201 10 human human JJ cord-293966-5c466xvz 201 11 coronavirus coronavirus NN cord-293966-5c466xvz 201 12 Engineering engineer VBG cord-293966-5c466xvz 201 13 a a DT cord-293966-5c466xvz 201 14 replication replication NN cord-293966-5c466xvz 201 15 - - HYPH cord-293966-5c466xvz 201 16 competent competent JJ cord-293966-5c466xvz 201 17 , , , cord-293966-5c466xvz 201 18 propagation propagation NN cord-293966-5c466xvz 201 19 - - HYPH cord-293966-5c466xvz 201 20 defective defective JJ cord-293966-5c466xvz 201 21 Middle Middle NNP cord-293966-5c466xvz 201 22 East East NNP cord-293966-5c466xvz 201 23 respiratory respiratory JJ cord-293966-5c466xvz 201 24 syndrome syndrome NN cord-293966-5c466xvz 201 25 coronavirus coronavirus NN cord-293966-5c466xvz 201 26 as as IN cord-293966-5c466xvz 201 27 a a DT cord-293966-5c466xvz 201 28 vaccine vaccine NN cord-293966-5c466xvz 201 29 candidate candidate NN cord-293966-5c466xvz 201 30 Reverse reverse VB cord-293966-5c466xvz 201 31 genetics genetic NNS cord-293966-5c466xvz 201 32 with with IN cord-293966-5c466xvz 201 33 a a DT cord-293966-5c466xvz 201 34 full full JJ cord-293966-5c466xvz 201 35 - - HYPH cord-293966-5c466xvz 201 36 length length NN cord-293966-5c466xvz 201 37 infectious infectious JJ cord-293966-5c466xvz 201 38 cDNA cdna NN cord-293966-5c466xvz 201 39 of of IN cord-293966-5c466xvz 201 40 the the DT cord-293966-5c466xvz 201 41 Middle Middle NNP cord-293966-5c466xvz 201 42 East East NNP cord-293966-5c466xvz 201 43 respiratory respiratory JJ cord-293966-5c466xvz 201 44 syndrome syndrome NN cord-293966-5c466xvz 201 45 coronavirus coronavirus NN cord-293966-5c466xvz 201 46 Engineering Engineering NNP cord-293966-5c466xvz 201 47 the the DT cord-293966-5c466xvz 201 48 largest large JJS cord-293966-5c466xvz 201 49 RNA RNA NNP cord-293966-5c466xvz 201 50 virus virus NN cord-293966-5c466xvz 201 51 genome genome NN cord-293966-5c466xvz 201 52 as as IN cord-293966-5c466xvz 201 53 an an DT cord-293966-5c466xvz 201 54 infectious infectious JJ cord-293966-5c466xvz 201 55 bacterial bacterial JJ cord-293966-5c466xvz 201 56 artificial artificial JJ cord-293966-5c466xvz 201 57 chromosome chromosome NN cord-293966-5c466xvz 201 58 Systematic systematic JJ cord-293966-5c466xvz 201 59 assembly assembly NN cord-293966-5c466xvz 201 60 of of IN cord-293966-5c466xvz 201 61 a a DT cord-293966-5c466xvz 201 62 full full JJ cord-293966-5c466xvz 201 63 - - HYPH cord-293966-5c466xvz 201 64 length length NN cord-293966-5c466xvz 201 65 infectious infectious JJ cord-293966-5c466xvz 201 66 cDNA cdna NN cord-293966-5c466xvz 201 67 of of IN cord-293966-5c466xvz 201 68 mouse mouse NNP cord-293966-5c466xvz 201 69 hepatitis hepatitis NNP cord-293966-5c466xvz 201 70 virus virus NN cord-293966-5c466xvz 201 71 strain strain VBP cord-293966-5c466xvz 201 72 A59 A59 NNP cord-293966-5c466xvz 201 73 Strategy Strategy NNP cord-293966-5c466xvz 201 74 for for IN cord-293966-5c466xvz 201 75 systematic systematic JJ cord-293966-5c466xvz 201 76 assembly assembly NN cord-293966-5c466xvz 201 77 of of IN cord-293966-5c466xvz 201 78 large large JJ cord-293966-5c466xvz 201 79 RNA RNA NNP cord-293966-5c466xvz 201 80 and and CC cord-293966-5c466xvz 201 81 DNA dna NN cord-293966-5c466xvz 201 82 genomes genome NNS cord-293966-5c466xvz 201 83 : : : cord-293966-5c466xvz 201 84 transmissible transmissible JJ cord-293966-5c466xvz 201 85 gastroenteritis gastroenteritis JJ cord-293966-5c466xvz 201 86 virus virus NN cord-293966-5c466xvz 201 87 model model NN cord-293966-5c466xvz 201 88 Construction construction NN cord-293966-5c466xvz 201 89 of of IN cord-293966-5c466xvz 201 90 a a DT cord-293966-5c466xvz 201 91 severe severe JJ cord-293966-5c466xvz 201 92 acute acute JJ cord-293966-5c466xvz 201 93 respiratory respiratory JJ cord-293966-5c466xvz 201 94 syndrome syndrome NN cord-293966-5c466xvz 201 95 coronavirus coronavirus NN cord-293966-5c466xvz 201 96 infectious infectious JJ cord-293966-5c466xvz 201 97 cDNA cdna NN cord-293966-5c466xvz 201 98 clone clone NN cord-293966-5c466xvz 201 99 and and CC cord-293966-5c466xvz 201 100 a a DT cord-293966-5c466xvz 201 101 replicon replicon NN cord-293966-5c466xvz 201 102 to to TO cord-293966-5c466xvz 201 103 study study VB cord-293966-5c466xvz 201 104 coronavirus coronavirus NN cord-293966-5c466xvz 201 105 RNA RNA NNP cord-293966-5c466xvz 201 106 synthesis synthesis NN cord-293966-5c466xvz 201 107 Molecular molecular JJ cord-293966-5c466xvz 201 108 characterization characterization NN cord-293966-5c466xvz 201 109 of of IN cord-293966-5c466xvz 201 110 feline feline JJ cord-293966-5c466xvz 201 111 infectious infectious JJ cord-293966-5c466xvz 201 112 peritonitis peritonitis NN cord-293966-5c466xvz 201 113 virus virus NN cord-293966-5c466xvz 201 114 strain strain VBP cord-293966-5c466xvz 201 115 DF-2 DF-2 NNP cord-293966-5c466xvz 201 116 and and CC cord-293966-5c466xvz 201 117 studies study NNS cord-293966-5c466xvz 201 118 of of IN cord-293966-5c466xvz 201 119 the the DT cord-293966-5c466xvz 201 120 role role NN cord-293966-5c466xvz 201 121 of of IN cord-293966-5c466xvz 201 122 ORF3abc orf3abc XX cord-293966-5c466xvz 201 123 in in IN cord-293966-5c466xvz 201 124 viral viral JJ cord-293966-5c466xvz 201 125 cell cell NN cord-293966-5c466xvz 201 126 tropism tropism NN cord-293966-5c466xvz 202 1 The the DT cord-293966-5c466xvz 202 2 nsp3 nsp3 NNS cord-293966-5c466xvz 202 3 macrodomain macrodomain NN cord-293966-5c466xvz 202 4 promotes promote VBZ cord-293966-5c466xvz 202 5 virulence virulence NN cord-293966-5c466xvz 202 6 in in IN cord-293966-5c466xvz 202 7 mice mouse NNS cord-293966-5c466xvz 202 8 with with IN cord-293966-5c466xvz 202 9 coronavirus coronavirus NN cord-293966-5c466xvz 202 10 - - HYPH cord-293966-5c466xvz 202 11 induced induce VBN cord-293966-5c466xvz 202 12 encephalitis encephalitis NN cord-293966-5c466xvz 202 13 Recovery recovery NN cord-293966-5c466xvz 202 14 of of IN cord-293966-5c466xvz 202 15 a a DT cord-293966-5c466xvz 202 16 neurovirulent neurovirulent NN cord-293966-5c466xvz 202 17 human human JJ cord-293966-5c466xvz 202 18 coronavirus coronavirus NN cord-293966-5c466xvz 202 19 OC43 OC43 NNP cord-293966-5c466xvz 202 20 from from IN cord-293966-5c466xvz 202 21 an an DT cord-293966-5c466xvz 202 22 infectious infectious JJ cord-293966-5c466xvz 202 23 cDNA cdna NN cord-293966-5c466xvz 202 24 clone clone NN cord-293966-5c466xvz 202 25 Development Development NNP cord-293966-5c466xvz 202 26 of of IN cord-293966-5c466xvz 202 27 the the DT cord-293966-5c466xvz 202 28 full full JJ cord-293966-5c466xvz 202 29 - - HYPH cord-293966-5c466xvz 202 30 length length NN cord-293966-5c466xvz 202 31 cDNA cdna NN cord-293966-5c466xvz 202 32 clones clone NNS cord-293966-5c466xvz 202 33 of of IN cord-293966-5c466xvz 202 34 two two CD cord-293966-5c466xvz 202 35 porcine porcine JJ cord-293966-5c466xvz 202 36 epidemic epidemic NN cord-293966-5c466xvz 202 37 diarrhea diarrhea NN cord-293966-5c466xvz 202 38 disease disease NN cord-293966-5c466xvz 202 39 virus virus NN cord-293966-5c466xvz 202 40 isolates isolate VBZ cord-293966-5c466xvz 202 41 with with IN cord-293966-5c466xvz 202 42 different different JJ cord-293966-5c466xvz 202 43 virulence virulence NN cord-293966-5c466xvz 202 44 Bat Bat NNP cord-293966-5c466xvz 202 45 severe severe JJ cord-293966-5c466xvz 202 46 acute acute JJ cord-293966-5c466xvz 202 47 respiratory respiratory JJ cord-293966-5c466xvz 202 48 syndrome syndrome NN cord-293966-5c466xvz 202 49 - - HYPH cord-293966-5c466xvz 202 50 like like JJ cord-293966-5c466xvz 203 1 coronavirus coronavirus NN cord-293966-5c466xvz 203 2 WIV1 WIV1 NNP cord-293966-5c466xvz 203 3 encodes encode VBZ cord-293966-5c466xvz 203 4 an an DT cord-293966-5c466xvz 203 5 extra extra JJ cord-293966-5c466xvz 203 6 accessory accessory NN cord-293966-5c466xvz 203 7 protein protein NN cord-293966-5c466xvz 203 8 , , , cord-293966-5c466xvz 203 9 ORFX ORFX NNP cord-293966-5c466xvz 203 10 , , , cord-293966-5c466xvz 203 11 involved involve VBN cord-293966-5c466xvz 203 12 in in IN cord-293966-5c466xvz 203 13 modulation modulation NN cord-293966-5c466xvz 203 14 of of IN cord-293966-5c466xvz 203 15 the the DT cord-293966-5c466xvz 203 16 host host NN cord-293966-5c466xvz 203 17 immune immune JJ cord-293966-5c466xvz 203 18 response response NN cord-293966-5c466xvz 203 19 Use Use NNP cord-293966-5c466xvz 203 20 of of IN cord-293966-5c466xvz 203 21 bacteriophage bacteriophage NN cord-293966-5c466xvz 203 22 lambda lambda NN cord-293966-5c466xvz 203 23 recombination recombination NN cord-293966-5c466xvz 203 24 functions function NNS cord-293966-5c466xvz 203 25 to to TO cord-293966-5c466xvz 203 26 promote promote VB cord-293966-5c466xvz 203 27 gene gene NN cord-293966-5c466xvz 203 28 replacement replacement NN cord-293966-5c466xvz 203 29 in in IN cord-293966-5c466xvz 203 30 Escherichia Escherichia NNP cord-293966-5c466xvz 203 31 coli coli NNS cord-293966-5c466xvz 204 1 In in IN cord-293966-5c466xvz 204 2 vivo vivo FW cord-293966-5c466xvz 204 3 recombineering recombineering NN cord-293966-5c466xvz 204 4 of of IN cord-293966-5c466xvz 204 5 bacteriophage bacteriophage NN cord-293966-5c466xvz 204 6 lambda lambda NN cord-293966-5c466xvz 204 7 by by IN cord-293966-5c466xvz 204 8 PCR PCR NNP cord-293966-5c466xvz 204 9 fragments fragment NNS cord-293966-5c466xvz 204 10 and and CC cord-293966-5c466xvz 204 11 single single JJ cord-293966-5c466xvz 204 12 - - HYPH cord-293966-5c466xvz 204 13 strand strand NN cord-293966-5c466xvz 204 14 oligonucleotides oligonucleotide NNS cord-293966-5c466xvz 205 1 A a DT cord-293966-5c466xvz 205 2 highly highly RB cord-293966-5c466xvz 205 3 efficient efficient JJ cord-293966-5c466xvz 205 4 Escherichia escherichia NN cord-293966-5c466xvz 205 5 coli coli NNS cord-293966-5c466xvz 205 6 - - HYPH cord-293966-5c466xvz 205 7 based base VBN cord-293966-5c466xvz 205 8 chromosome chromosome NN cord-293966-5c466xvz 205 9 engineering engineering NN cord-293966-5c466xvz 205 10 system system NN cord-293966-5c466xvz 205 11 adapted adapt VBN cord-293966-5c466xvz 205 12 for for IN cord-293966-5c466xvz 205 13 recombinogenic recombinogenic JJ cord-293966-5c466xvz 205 14 targeting targeting NN cord-293966-5c466xvz 205 15 and and CC cord-293966-5c466xvz 205 16 subcloning subcloning NN cord-293966-5c466xvz 205 17 of of IN cord-293966-5c466xvz 205 18 BAC BAC NNP cord-293966-5c466xvz 205 19 DNA DNA NNP cord-293966-5c466xvz 206 1 A a DT cord-293966-5c466xvz 206 2 new new JJ cord-293966-5c466xvz 206 3 logic logic NN cord-293966-5c466xvz 206 4 for for IN cord-293966-5c466xvz 206 5 DNA dna NN cord-293966-5c466xvz 206 6 engineering engineering NN cord-293966-5c466xvz 206 7 using use VBG cord-293966-5c466xvz 206 8 recombination recombination NN cord-293966-5c466xvz 206 9 in in IN cord-293966-5c466xvz 206 10 Escherichia Escherichia NNP cord-293966-5c466xvz 206 11 coli coli NNS cord-293966-5c466xvz 207 1 Simple simple JJ cord-293966-5c466xvz 207 2 and and CC cord-293966-5c466xvz 207 3 highly highly RB cord-293966-5c466xvz 207 4 efficient efficient JJ cord-293966-5c466xvz 207 5 BAC BAC NNP cord-293966-5c466xvz 207 6 recombineering recombineere VBG cord-293966-5c466xvz 207 7 using use VBG cord-293966-5c466xvz 207 8 galK galK NNP cord-293966-5c466xvz 207 9 selection selection NN cord-293966-5c466xvz 207 10 Two two CD cord-293966-5c466xvz 207 11 - - HYPH cord-293966-5c466xvz 207 12 step step NN cord-293966-5c466xvz 207 13 red red JJ cord-293966-5c466xvz 207 14 - - HYPH cord-293966-5c466xvz 207 15 mediated mediate VBN cord-293966-5c466xvz 207 16 recombination recombination NN cord-293966-5c466xvz 207 17 for for IN cord-293966-5c466xvz 207 18 versatile versatile JJ cord-293966-5c466xvz 207 19 high high JJ cord-293966-5c466xvz 207 20 - - HYPH cord-293966-5c466xvz 207 21 efficiency efficiency NN cord-293966-5c466xvz 207 22 markerless markerless NN cord-293966-5c466xvz 207 23 DNA dna NN cord-293966-5c466xvz 207 24 manipulation manipulation NN cord-293966-5c466xvz 207 25 in in IN cord-293966-5c466xvz 207 26 Escherichia Escherichia NNP cord-293966-5c466xvz 207 27 coli coli NNS cord-293966-5c466xvz 207 28 Engineering engineering NN cord-293966-5c466xvz 208 1 infectious infectious JJ cord-293966-5c466xvz 208 2 cDNAs cdna NNS cord-293966-5c466xvz 208 3 of of IN cord-293966-5c466xvz 208 4 coronavirus coronavirus NN cord-293966-5c466xvz 208 5 as as IN cord-293966-5c466xvz 208 6 bacterial bacterial JJ cord-293966-5c466xvz 208 7 artificial artificial JJ cord-293966-5c466xvz 208 8 chromosomes chromosome NNS cord-293966-5c466xvz 208 9 En en IN cord-293966-5c466xvz 208 10 passant passant NN cord-293966-5c466xvz 208 11 mutagenesis mutagenesis NN cord-293966-5c466xvz 209 1 : : : cord-293966-5c466xvz 209 2 a a DT cord-293966-5c466xvz 209 3 two two CD cord-293966-5c466xvz 209 4 step step NN cord-293966-5c466xvz 209 5 markerless markerless NN cord-293966-5c466xvz 209 6 red red JJ cord-293966-5c466xvz 209 7 recombination recombination NN cord-293966-5c466xvz 209 8 system system NN cord-293966-5c466xvz 210 1 Acknowledgments acknowledgment NNS cord-293966-5c466xvz 211 1 I -PRON- PRP cord-293966-5c466xvz 211 2 thank thank VBP cord-293966-5c466xvz 211 3 Jeremiah Jeremiah NNP cord-293966-5c466xvz 211 4 Athmer Athmer NNP cord-293966-5c466xvz 211 5 and and CC cord-293966-5c466xvz 211 6 Andrea Andrea NNP cord-293966-5c466xvz 211 7 Pruijssers Pruijssers NNP cord-293966-5c466xvz 211 8 for for IN cord-293966-5c466xvz 211 9 their -PRON- PRP$ cord-293966-5c466xvz 211 10 substantial substantial JJ cord-293966-5c466xvz 211 11 modifications modification NNS cord-293966-5c466xvz 211 12 and and CC cord-293966-5c466xvz 211 13 improvements improvement NNS cord-293966-5c466xvz 211 14 to to IN cord-293966-5c466xvz 211 15 this this DT cord-293966-5c466xvz 211 16 protocol protocol NN cord-293966-5c466xvz 211 17 over over IN cord-293966-5c466xvz 211 18 the the DT cord-293966-5c466xvz 211 19 years year NNS cord-293966-5c466xvz 211 20 . . . cord-293966-5c466xvz 212 1 I -PRON- PRP cord-293966-5c466xvz 212 2 also also RB cord-293966-5c466xvz 212 3 thank thank VBP cord-293966-5c466xvz 212 4 Catherine Catherine NNP cord-293966-5c466xvz 212 5 Kerr Kerr NNP cord-293966-5c466xvz 212 6 , , , cord-293966-5c466xvz 212 7 Ethan Ethan NNP cord-293966-5c466xvz 212 8 Doerger Doerger NNP cord-293966-5c466xvz 212 9 , , , cord-293966-5c466xvz 212 10 Andrea Andrea NNP cord-293966-5c466xvz 212 11 Pruijssers Pruijssers NNP cord-293966-5c466xvz 212 12 , , , cord-293966-5c466xvz 212 13 Isabel Isabel NNP cord-293966-5c466xvz 212 14 Sola Sola NNP cord-293966-5c466xvz 212 15 , , , cord-293966-5c466xvz 212 16 and and CC cord-293966-5c466xvz 212 17 Luis Luis NNP cord-293966-5c466xvz 212 18 Enjuanes Enjuanes NNP cord-293966-5c466xvz 212 19 for for IN cord-293966-5c466xvz 212 20 critical critical JJ cord-293966-5c466xvz 212 21 reading reading NN cord-293966-5c466xvz 212 22 of of IN cord-293966-5c466xvz 212 23 this this DT cord-293966-5c466xvz 212 24 manuscript manuscript NN cord-293966-5c466xvz 212 25 . . . cord-293966-5c466xvz 213 1 This this DT cord-293966-5c466xvz 213 2 work work NN cord-293966-5c466xvz 213 3 was be VBD cord-293966-5c466xvz 213 4 supported support VBN cord-293966-5c466xvz 213 5 in in IN cord-293966-5c466xvz 213 6 part part NN cord-293966-5c466xvz 213 7 by by IN cord-293966-5c466xvz 213 8 NIH NIH NNP cord-293966-5c466xvz 213 9 grants grant NNS cord-293966-5c466xvz 213 10 CoBRE cobre JJ cord-293966-5c466xvz 214 1 P20 P20 NNP cord-293966-5c466xvz 214 2 GM113117 GM113117 NNP cord-293966-5c466xvz 214 3 - - NN cord-293966-5c466xvz 214 4 02 02 CD cord-293966-5c466xvz 215 1 and and CC cord-293966-5c466xvz 215 2 K22 K22 NNP cord-293966-5c466xvz 215 3 AI134993 AI134993 NNP cord-293966-5c466xvz 215 4 - - HYPH cord-293966-5c466xvz 215 5 01 01 CD cord-293966-5c466xvz 215 6 , , , cord-293966-5c466xvz 215 7 and and CC cord-293966-5c466xvz 215 8 start start VB cord-293966-5c466xvz 215 9 - - HYPH cord-293966-5c466xvz 215 10 up up RP cord-293966-5c466xvz 215 11 funds fund NNS cord-293966-5c466xvz 215 12 from from IN cord-293966-5c466xvz 215 13 the the DT cord-293966-5c466xvz 215 14 University University NNP cord-293966-5c466xvz 215 15 of of IN cord-293966-5c466xvz 215 16 Kansas Kansas NNP cord-293966-5c466xvz 215 17 . . . cord-293966-5c466xvz 216 1 The the DT cord-293966-5c466xvz 216 2 funders funder NNS cord-293966-5c466xvz 216 3 had have VBD cord-293966-5c466xvz 216 4 no no DT cord-293966-5c466xvz 216 5 role role NN cord-293966-5c466xvz 216 6 in in IN cord-293966-5c466xvz 216 7 study study NN cord-293966-5c466xvz 216 8 design design NN cord-293966-5c466xvz 216 9 , , , cord-293966-5c466xvz 216 10 data datum NNS cord-293966-5c466xvz 216 11 collection collection NN cord-293966-5c466xvz 216 12 and and CC cord-293966-5c466xvz 216 13 interpretation interpretation NN cord-293966-5c466xvz 216 14 , , , cord-293966-5c466xvz 216 15 or or CC cord-293966-5c466xvz 216 16 the the DT cord-293966-5c466xvz 216 17 decision decision NN cord-293966-5c466xvz 216 18 to to TO cord-293966-5c466xvz 216 19 submit submit VB cord-293966-5c466xvz 216 20 the the DT cord-293966-5c466xvz 216 21 work work NN cord-293966-5c466xvz 216 22 for for IN cord-293966-5c466xvz 216 23 publication publication NN cord-293966-5c466xvz 216 24 . . .