id sid tid token lemma pos cord-347472-n6811ens 1 1 key key NN cord-347472-n6811ens 1 2 : : : cord-347472-n6811ens 2 1 cord-347472-n6811ens cord-347472-n6811en VBN cord-347472-n6811ens 2 2 authors author NNS cord-347472-n6811ens 2 3 : : : cord-347472-n6811ens 2 4 Rosebrock Rosebrock NNP cord-347472-n6811ens 2 5 , , , cord-347472-n6811ens 2 6 Adam Adam NNP cord-347472-n6811ens 2 7 P. P. NNP cord-347472-n6811ens 2 8 title title NN cord-347472-n6811ens 2 9 : : : cord-347472-n6811ens 3 1 Patient Patient NNP cord-347472-n6811ens 3 2 DNA DNA NNP cord-347472-n6811ens 3 3 cross cross NN cord-347472-n6811ens 3 4 - - NN cord-347472-n6811ens 3 5 reactivity reactivity NN cord-347472-n6811ens 3 6 of of IN cord-347472-n6811ens 3 7 the the DT cord-347472-n6811ens 3 8 CDC CDC NNP cord-347472-n6811ens 3 9 SARS SARS NNP cord-347472-n6811ens 3 10 - - HYPH cord-347472-n6811ens 3 11 CoV-2 CoV-2 NNP cord-347472-n6811ens 3 12 extraction extraction NN cord-347472-n6811ens 3 13 control control NN cord-347472-n6811ens 3 14 leads lead VBZ cord-347472-n6811ens 3 15 to to IN cord-347472-n6811ens 3 16 an an DT cord-347472-n6811ens 3 17 inherent inherent JJ cord-347472-n6811ens 3 18 potential potential NN cord-347472-n6811ens 3 19 for for IN cord-347472-n6811ens 3 20 false false JJ cord-347472-n6811ens 3 21 negative negative JJ cord-347472-n6811ens 3 22 results result NNS cord-347472-n6811ens 3 23 date date NN cord-347472-n6811ens 4 1 : : : cord-347472-n6811ens 4 2 2020 2020 CD cord-347472-n6811ens 4 3 - - HYPH cord-347472-n6811ens 4 4 05 05 CD cord-347472-n6811ens 4 5 - - SYM cord-347472-n6811ens 4 6 15 15 CD cord-347472-n6811ens 4 7 journal journal NN cord-347472-n6811ens 4 8 : : : cord-347472-n6811ens 5 1 bioRxiv biorxiv IN cord-347472-n6811ens 5 2 DOI DOI NNP cord-347472-n6811ens 5 3 : : : cord-347472-n6811ens 6 1 10.1101/2020.05.13.094839 10.1101/2020.05.13.094839 CD cord-347472-n6811ens 7 1 sha sha NNP cord-347472-n6811ens 7 2 : : : cord-347472-n6811ens 8 1 cbd17d4433d547a8641842b57888e4a19f45cc20 cbd17d4433d547a8641842b57888e4a19f45cc20 NNP cord-347472-n6811ens 8 2 doc_id doc_id CD cord-347472-n6811ens 8 3 : : : cord-347472-n6811ens 9 1 347472 347472 CD cord-347472-n6811ens 9 2 cord_uid cord_uid NN cord-347472-n6811ens 9 3 : : : cord-347472-n6811ens 10 1 n6811ens n6811ens NNP cord-347472-n6811ens 10 2 Testing Testing NNP cord-347472-n6811ens 10 3 for for IN cord-347472-n6811ens 10 4 RNA RNA NNP cord-347472-n6811ens 10 5 viruses virus NNS cord-347472-n6811ens 10 6 such such JJ cord-347472-n6811ens 10 7 as as IN cord-347472-n6811ens 10 8 SARS SARS NNP cord-347472-n6811ens 10 9 - - HYPH cord-347472-n6811ens 10 10 CoV-2 CoV-2 NNP cord-347472-n6811ens 10 11 requires require VBZ cord-347472-n6811ens 10 12 careful careful JJ cord-347472-n6811ens 10 13 handling handling NN cord-347472-n6811ens 10 14 of of IN cord-347472-n6811ens 10 15 inherently inherently RB cord-347472-n6811ens 10 16 labile labile JJ cord-347472-n6811ens 10 17 RNA RNA NNP cord-347472-n6811ens 10 18 during during IN cord-347472-n6811ens 10 19 sample sample NN cord-347472-n6811ens 10 20 collection collection NN cord-347472-n6811ens 10 21 , , , cord-347472-n6811ens 10 22 clinical clinical JJ cord-347472-n6811ens 10 23 processing processing NN cord-347472-n6811ens 10 24 , , , cord-347472-n6811ens 10 25 and and CC cord-347472-n6811ens 10 26 molecular molecular JJ cord-347472-n6811ens 10 27 analysis analysis NN cord-347472-n6811ens 10 28 . . . cord-347472-n6811ens 11 1 Tests test NNS cord-347472-n6811ens 11 2 must must MD cord-347472-n6811ens 11 3 include include VB cord-347472-n6811ens 11 4 fail fail VB cord-347472-n6811ens 11 5 - - HYPH cord-347472-n6811ens 11 6 safe safe JJ cord-347472-n6811ens 11 7 controls control NNS cord-347472-n6811ens 11 8 that that WDT cord-347472-n6811ens 11 9 affirmatively affirmatively RB cord-347472-n6811ens 11 10 report report VBP cord-347472-n6811ens 11 11 the the DT cord-347472-n6811ens 11 12 presence presence NN cord-347472-n6811ens 11 13 of of IN cord-347472-n6811ens 11 14 intact intact JJ cord-347472-n6811ens 11 15 RNA RNA NNP cord-347472-n6811ens 11 16 and and CC cord-347472-n6811ens 11 17 demonstrate demonstrate VB cord-347472-n6811ens 11 18 success success NN cord-347472-n6811ens 11 19 of of IN cord-347472-n6811ens 11 20 all all DT cord-347472-n6811ens 11 21 steps step NNS cord-347472-n6811ens 11 22 of of IN cord-347472-n6811ens 11 23 the the DT cord-347472-n6811ens 11 24 assay assay NN cord-347472-n6811ens 11 25 . . . cord-347472-n6811ens 12 1 A a DT cord-347472-n6811ens 12 2 result result NN cord-347472-n6811ens 12 3 of of IN cord-347472-n6811ens 12 4 “ " `` cord-347472-n6811ens 12 5 no no DT cord-347472-n6811ens 12 6 virus virus NN cord-347472-n6811ens 12 7 signal signal NN cord-347472-n6811ens 12 8 ” " '' cord-347472-n6811ens 12 9 is be VBZ cord-347472-n6811ens 12 10 insufficient insufficient JJ cord-347472-n6811ens 12 11 for for IN cord-347472-n6811ens 12 12 clinical clinical JJ cord-347472-n6811ens 12 13 interpretation interpretation NN cord-347472-n6811ens 12 14 : : : cord-347472-n6811ens 12 15 controls control NNS cord-347472-n6811ens 12 16 must must MD cord-347472-n6811ens 12 17 also also RB cord-347472-n6811ens 12 18 say say VB cord-347472-n6811ens 12 19 “ " `` cord-347472-n6811ens 12 20 The the DT cord-347472-n6811ens 12 21 reaction reaction NN cord-347472-n6811ens 12 22 worked work VBD cord-347472-n6811ens 12 23 as as IN cord-347472-n6811ens 12 24 intended intend VBN cord-347472-n6811ens 12 25 and and CC cord-347472-n6811ens 12 26 would would MD cord-347472-n6811ens 12 27 have have VB cord-347472-n6811ens 12 28 found find VBN cord-347472-n6811ens 12 29 virus virus NN cord-347472-n6811ens 12 30 if if IN cord-347472-n6811ens 12 31 present present JJ cord-347472-n6811ens 12 32 . . . cord-347472-n6811ens 12 33 ” " '' cord-347472-n6811ens 13 1 Unfortunately unfortunately RB cord-347472-n6811ens 13 2 , , , cord-347472-n6811ens 13 3 a a DT cord-347472-n6811ens 13 4 widely widely RB cord-347472-n6811ens 13 5 used use VBN cord-347472-n6811ens 13 6 test test NN cord-347472-n6811ens 13 7 specified specify VBN cord-347472-n6811ens 13 8 by by IN cord-347472-n6811ens 13 9 the the DT cord-347472-n6811ens 13 10 US US NNP cord-347472-n6811ens 13 11 Centers Centers NNPS cord-347472-n6811ens 13 12 for for IN cord-347472-n6811ens 13 13 Disease Disease NNP cord-347472-n6811ens 13 14 Control Control NNP cord-347472-n6811ens 13 15 and and CC cord-347472-n6811ens 13 16 Prevention Prevention NNP cord-347472-n6811ens 13 17 ( ( -LRB- cord-347472-n6811ens 13 18 CDC CDC NNP cord-347472-n6811ens 13 19 ) ) -RRB- cord-347472-n6811ens 13 20 incorporates incorporate VBZ cord-347472-n6811ens 13 21 a a DT cord-347472-n6811ens 13 22 control control NN cord-347472-n6811ens 13 23 that that WDT cord-347472-n6811ens 13 24 does do VBZ cord-347472-n6811ens 13 25 not not RB cord-347472-n6811ens 13 26 perform perform VB cord-347472-n6811ens 13 27 as as IN cord-347472-n6811ens 13 28 intended intend VBN cord-347472-n6811ens 13 29 and and CC cord-347472-n6811ens 13 30 claimed claim VBN cord-347472-n6811ens 13 31 . . . cord-347472-n6811ens 14 1 Detecting detect VBG cord-347472-n6811ens 14 2 SARS SARS NNP cord-347472-n6811ens 14 3 - - HYPH cord-347472-n6811ens 14 4 CoV-2 CoV-2 NNP cord-347472-n6811ens 14 5 with with IN cord-347472-n6811ens 14 6 this this DT cord-347472-n6811ens 14 7 assay assay NN cord-347472-n6811ens 14 8 requires require VBZ cord-347472-n6811ens 14 9 both both DT cord-347472-n6811ens 14 10 intact intact JJ cord-347472-n6811ens 14 11 RNA RNA NNP cord-347472-n6811ens 14 12 and and CC cord-347472-n6811ens 14 13 successful successful JJ cord-347472-n6811ens 14 14 reverse reverse NN cord-347472-n6811ens 14 15 transcription transcription NN cord-347472-n6811ens 14 16 . . . cord-347472-n6811ens 15 1 The the DT cord-347472-n6811ens 15 2 CDC CDC NNP cord-347472-n6811ens 15 3 - - HYPH cord-347472-n6811ens 15 4 specified specify VBN cord-347472-n6811ens 15 5 control control NN cord-347472-n6811ens 15 6 does do VBZ cord-347472-n6811ens 15 7 not not RB cord-347472-n6811ens 15 8 require require VB cord-347472-n6811ens 15 9 either either DT cord-347472-n6811ens 15 10 of of IN cord-347472-n6811ens 15 11 these these DT cord-347472-n6811ens 15 12 , , , cord-347472-n6811ens 15 13 due due IN cord-347472-n6811ens 15 14 to to IN cord-347472-n6811ens 15 15 its -PRON- PRP$ cord-347472-n6811ens 15 16 inability inability NN cord-347472-n6811ens 15 17 to to TO cord-347472-n6811ens 15 18 differentiate differentiate VB cord-347472-n6811ens 15 19 human human JJ cord-347472-n6811ens 15 20 genomic genomic JJ cord-347472-n6811ens 15 21 DNA dna NN cord-347472-n6811ens 15 22 from from IN cord-347472-n6811ens 15 23 reverse reverse RB cord-347472-n6811ens 15 24 - - HYPH cord-347472-n6811ens 15 25 transcribed transcribe VBN cord-347472-n6811ens 15 26 RNA RNA NNP cord-347472-n6811ens 15 27 . . . cord-347472-n6811ens 16 1 Patient Patient NNP cord-347472-n6811ens 16 2 DNA DNA NNP cord-347472-n6811ens 16 3 is be VBZ cord-347472-n6811ens 16 4 copurified copurifie VBN cord-347472-n6811ens 16 5 from from IN cord-347472-n6811ens 16 6 nasopharyngeal nasopharyngeal JJ cord-347472-n6811ens 16 7 swabs swab NNS cord-347472-n6811ens 16 8 during during IN cord-347472-n6811ens 16 9 clinically clinically RB cord-347472-n6811ens 16 10 - - HYPH cord-347472-n6811ens 16 11 approved approve VBN cord-347472-n6811ens 16 12 RNA RNA NNP cord-347472-n6811ens 16 13 extraction extraction NN cord-347472-n6811ens 16 14 and and CC cord-347472-n6811ens 16 15 is be VBZ cord-347472-n6811ens 16 16 sufficient sufficient JJ cord-347472-n6811ens 16 17 to to TO cord-347472-n6811ens 16 18 return return VB cord-347472-n6811ens 16 19 an an DT cord-347472-n6811ens 16 20 “ " `` cord-347472-n6811ens 16 21 extraction extraction NN cord-347472-n6811ens 16 22 control control NN cord-347472-n6811ens 16 23 success success NN cord-347472-n6811ens 16 24 ” " '' cord-347472-n6811ens 16 25 signal signal NN cord-347472-n6811ens 16 26 using use VBG cord-347472-n6811ens 16 27 the the DT cord-347472-n6811ens 16 28 CDC CDC NNP cord-347472-n6811ens 16 29 design design NN cord-347472-n6811ens 16 30 . . . cord-347472-n6811ens 17 1 As as IN cord-347472-n6811ens 17 2 such such JJ cord-347472-n6811ens 17 3 , , , cord-347472-n6811ens 17 4 this this DT cord-347472-n6811ens 17 5 assay assay NN cord-347472-n6811ens 17 6 fails fail VBZ cord-347472-n6811ens 17 7 - - HYPH cord-347472-n6811ens 17 8 unsafe unsafe JJ cord-347472-n6811ens 17 9 : : : cord-347472-n6811ens 17 10 truly truly RB cord-347472-n6811ens 17 11 positive positive JJ cord-347472-n6811ens 17 12 patient patient NN cord-347472-n6811ens 17 13 samples sample NNS cord-347472-n6811ens 17 14 return return VBP cord-347472-n6811ens 17 15 a a DT cord-347472-n6811ens 17 16 false false JJ cord-347472-n6811ens 17 17 - - HYPH cord-347472-n6811ens 17 18 negative negative JJ cord-347472-n6811ens 17 19 result result NN cord-347472-n6811ens 17 20 of of IN cord-347472-n6811ens 17 21 “ " `` cord-347472-n6811ens 17 22 no no DT cord-347472-n6811ens 17 23 virus virus NN cord-347472-n6811ens 17 24 detected detect VBN cord-347472-n6811ens 17 25 , , , cord-347472-n6811ens 17 26 control control NN cord-347472-n6811ens 17 27 succeeded succeed VBD cord-347472-n6811ens 17 28 ” " '' cord-347472-n6811ens 17 29 following follow VBG cord-347472-n6811ens 17 30 any any DT cord-347472-n6811ens 17 31 of of IN cord-347472-n6811ens 17 32 several several JJ cord-347472-n6811ens 17 33 readily readily RB cord-347472-n6811ens 17 34 - - HYPH cord-347472-n6811ens 17 35 encountered encounter VBN cord-347472-n6811ens 17 36 mishaps mishap NNS cord-347472-n6811ens 17 37 . . . cord-347472-n6811ens 18 1 This this DT cord-347472-n6811ens 18 2 problem problem NN cord-347472-n6811ens 18 3 affects affect VBZ cord-347472-n6811ens 18 4 tens ten NNS cord-347472-n6811ens 18 5 - - HYPH cord-347472-n6811ens 18 6 of of IN cord-347472-n6811ens 18 7 - - HYPH cord-347472-n6811ens 18 8 millions million NNS cord-347472-n6811ens 18 9 of of IN cord-347472-n6811ens 18 10 patients patient NNS cord-347472-n6811ens 18 11 worth worth JJ cord-347472-n6811ens 18 12 of of IN cord-347472-n6811ens 18 13 shipped ship VBN cord-347472-n6811ens 18 14 assays assay NNS cord-347472-n6811ens 18 15 , , , cord-347472-n6811ens 18 16 but but CC cord-347472-n6811ens 18 17 many many JJ cord-347472-n6811ens 18 18 of of IN cord-347472-n6811ens 18 19 these these DT cord-347472-n6811ens 18 20 flawed flawed JJ cord-347472-n6811ens 18 21 reagents reagent NNS cord-347472-n6811ens 18 22 have have VBP cord-347472-n6811ens 18 23 not not RB cord-347472-n6811ens 18 24 yet yet RB cord-347472-n6811ens 18 25 been be VBN cord-347472-n6811ens 18 26 used use VBN cord-347472-n6811ens 18 27 . . . cord-347472-n6811ens 19 1 There there EX cord-347472-n6811ens 19 2 is be VBZ cord-347472-n6811ens 19 3 an an DT cord-347472-n6811ens 19 4 opportunity opportunity NN cord-347472-n6811ens 19 5 to to TO cord-347472-n6811ens 19 6 improve improve VB cord-347472-n6811ens 19 7 this this DT cord-347472-n6811ens 19 8 important important JJ cord-347472-n6811ens 19 9 diagnostic diagnostic JJ cord-347472-n6811ens 19 10 tool tool NN cord-347472-n6811ens 19 11 . . . cord-347472-n6811ens 20 1 As as IN cord-347472-n6811ens 20 2 demonstrated demonstrate VBN cord-347472-n6811ens 20 3 here here RB cord-347472-n6811ens 20 4 , , , cord-347472-n6811ens 20 5 a a DT cord-347472-n6811ens 20 6 re re NN cord-347472-n6811ens 20 7 - - JJ cord-347472-n6811ens 20 8 designed design VBN cord-347472-n6811ens 20 9 transcript transcript NN cord-347472-n6811ens 20 10 - - HYPH cord-347472-n6811ens 20 11 specific specific JJ cord-347472-n6811ens 20 12 control control NN cord-347472-n6811ens 20 13 correctly correctly RB cord-347472-n6811ens 20 14 monitors monitor VBZ cord-347472-n6811ens 20 15 sample sample NN cord-347472-n6811ens 20 16 collection collection NN cord-347472-n6811ens 20 17 , , , cord-347472-n6811ens 20 18 extraction extraction NN cord-347472-n6811ens 20 19 , , , cord-347472-n6811ens 20 20 reverse reverse JJ cord-347472-n6811ens 20 21 transcription transcription NN cord-347472-n6811ens 20 22 , , , cord-347472-n6811ens 20 23 and and CC cord-347472-n6811ens 20 24 qPCR qPCR NNP cord-347472-n6811ens 20 25 detection detection NN cord-347472-n6811ens 20 26 . . . cord-347472-n6811ens 21 1 This this DT cord-347472-n6811ens 21 2 approach approach NN cord-347472-n6811ens 21 3 can can MD cord-347472-n6811ens 21 4 be be VB cord-347472-n6811ens 21 5 rapidly rapidly RB cord-347472-n6811ens 21 6 implemented implement VBN cord-347472-n6811ens 21 7 and and CC cord-347472-n6811ens 21 8 will will MD cord-347472-n6811ens 21 9 help help VB cord-347472-n6811ens 21 10 reduce reduce VB cord-347472-n6811ens 21 11 truly truly RB cord-347472-n6811ens 21 12 positive positive JJ cord-347472-n6811ens 21 13 patients patient NNS cord-347472-n6811ens 21 14 from from IN cord-347472-n6811ens 21 15 being be VBG cord-347472-n6811ens 21 16 incorrectly incorrectly RB cord-347472-n6811ens 21 17 given give VBN cord-347472-n6811ens 21 18 the the DT cord-347472-n6811ens 21 19 all all RB cord-347472-n6811ens 21 20 - - HYPH cord-347472-n6811ens 21 21 clear clear JJ cord-347472-n6811ens 21 22 . . . cord-347472-n6811ens 22 1 One one CD cord-347472-n6811ens 22 2 Sentence sentence NN cord-347472-n6811ens 22 3 Summary Summary NNP cord-347472-n6811ens 22 4 A a DT cord-347472-n6811ens 22 5 widely widely RB cord-347472-n6811ens 22 6 - - HYPH cord-347472-n6811ens 22 7 used use VBN cord-347472-n6811ens 22 8 COVID-19 COVID-19 NNP cord-347472-n6811ens 22 9 diagnostic diagnostic NNP cord-347472-n6811ens 22 10 is be VBZ cord-347472-n6811ens 22 11 mis mi VBN cord-347472-n6811ens 22 12 - - HYPH cord-347472-n6811ens 22 13 designed design VBN cord-347472-n6811ens 22 14 and and CC cord-347472-n6811ens 22 15 generates generate VBZ cord-347472-n6811ens 22 16 false false JJ cord-347472-n6811ens 22 17 - - HYPH cord-347472-n6811ens 22 18 negative negative JJ cord-347472-n6811ens 22 19 results result NNS cord-347472-n6811ens 22 20 , , , cord-347472-n6811ens 22 21 dangerously dangerously RB cord-347472-n6811ens 22 22 confusing confusing JJ cord-347472-n6811ens 22 23 “ " `` cord-347472-n6811ens 22 24 No no UH cord-347472-n6811ens 22 25 ” " '' cord-347472-n6811ens 22 26 with with IN cord-347472-n6811ens 22 27 “ " `` cord-347472-n6811ens 22 28 Do do VBP cord-347472-n6811ens 22 29 n’t not RB cord-347472-n6811ens 22 30 know know VB cord-347472-n6811ens 22 31 ” " '' cord-347472-n6811ens 22 32 – – : cord-347472-n6811ens 22 33 but but CC cord-347472-n6811ens 22 34 it -PRON- PRP cord-347472-n6811ens 22 35 ’s ’ VBZ cord-347472-n6811ens 22 36 fixable fixable JJ cord-347472-n6811ens 23 1 the the DT cord-347472-n6811ens 23 2 focus focus NN cord-347472-n6811ens 23 3 of of IN cord-347472-n6811ens 23 4 molecular molecular JJ cord-347472-n6811ens 23 5 testing testing NN cord-347472-n6811ens 23 6 will will MD cord-347472-n6811ens 23 7 shift shift VB cord-347472-n6811ens 23 8 to to IN cord-347472-n6811ens 23 9 clearing clear VBG cord-347472-n6811ens 23 10 asymptomatic asymptomatic JJ cord-347472-n6811ens 23 11 individuals individual NNS cord-347472-n6811ens 23 12 based base VBN cord-347472-n6811ens 23 13 on on IN cord-347472-n6811ens 23 14 absence absence NN cord-347472-n6811ens 23 15 of of IN cord-347472-n6811ens 23 16 detectable detectable JJ cord-347472-n6811ens 23 17 virus virus NN cord-347472-n6811ens 23 18 . . . cord-347472-n6811ens 24 1 The the DT cord-347472-n6811ens 24 2 US US NNP cord-347472-n6811ens 24 3 Centers Centers NNPS cord-347472-n6811ens 24 4 for for IN cord-347472-n6811ens 24 5 Disease Disease NNP cord-347472-n6811ens 24 6 Control Control NNP cord-347472-n6811ens 24 7 and and CC cord-347472-n6811ens 24 8 Prevention Prevention NNP cord-347472-n6811ens 24 9 ( ( -LRB- cord-347472-n6811ens 24 10 CDC CDC NNP cord-347472-n6811ens 24 11 ) ) -RRB- cord-347472-n6811ens 24 12 have have VBP cord-347472-n6811ens 24 13 specified specify VBN cord-347472-n6811ens 24 14 and and CC cord-347472-n6811ens 24 15 given give VBN cord-347472-n6811ens 24 16 emergency emergency NN cord-347472-n6811ens 24 17 use use NN cord-347472-n6811ens 24 18 authorization authorization NN cord-347472-n6811ens 24 19 ( ( -LRB- cord-347472-n6811ens 24 20 EUA EUA NNP cord-347472-n6811ens 24 21 ) ) -RRB- cord-347472-n6811ens 24 22 for for IN cord-347472-n6811ens 24 23 a a DT cord-347472-n6811ens 24 24 SARS SARS NNP cord-347472-n6811ens 24 25 - - HYPH cord-347472-n6811ens 24 26 CoV-2 CoV-2 NNP cord-347472-n6811ens 24 27 molecular molecular JJ cord-347472-n6811ens 24 28 diagnostic diagnostic NN cord-347472-n6811ens 24 29 used use VBN cord-347472-n6811ens 24 30 to to TO cord-347472-n6811ens 24 31 detect detect VB cord-347472-n6811ens 24 32 viral viral JJ cord-347472-n6811ens 24 33 RNA rna NN cord-347472-n6811ens 24 34 in in IN cord-347472-n6811ens 24 35 clinical clinical JJ cord-347472-n6811ens 24 36 samples sample NNS cord-347472-n6811ens 24 37 ( ( -LRB- cord-347472-n6811ens 24 38 2 2 CD cord-347472-n6811ens 24 39 ) ) -RRB- cord-347472-n6811ens 24 40 . . . cord-347472-n6811ens 25 1 This this DT cord-347472-n6811ens 25 2 assay assay NN cord-347472-n6811ens 25 3 is be VBZ cord-347472-n6811ens 25 4 widely widely RB cord-347472-n6811ens 25 5 used use VBN cord-347472-n6811ens 25 6 and and CC cord-347472-n6811ens 25 7 also also RB cord-347472-n6811ens 25 8 serves serve VBZ cord-347472-n6811ens 25 9 as as IN cord-347472-n6811ens 25 10 a a DT cord-347472-n6811ens 25 11 prototype prototype NN cord-347472-n6811ens 25 12 for for IN cord-347472-n6811ens 25 13 many many JJ cord-347472-n6811ens 25 14 FDAauthorized fdaauthorize VBN cord-347472-n6811ens 25 15 tests test NNS cord-347472-n6811ens 25 16 ( ( -LRB- cord-347472-n6811ens 25 17 discussed discuss VBN cord-347472-n6811ens 25 18 below below RB cord-347472-n6811ens 25 19 ) ) -RRB- cord-347472-n6811ens 25 20 . . . cord-347472-n6811ens 26 1 As as IN cord-347472-n6811ens 26 2 I -PRON- PRP cord-347472-n6811ens 26 3 show show VBP cord-347472-n6811ens 26 4 here here RB cord-347472-n6811ens 26 5 , , , cord-347472-n6811ens 26 6 this this DT cord-347472-n6811ens 26 7 assay assay NN cord-347472-n6811ens 26 8 uses use VBZ cord-347472-n6811ens 26 9 a a DT cord-347472-n6811ens 26 10 poorly poorly RB cord-347472-n6811ens 26 11 - - HYPH cord-347472-n6811ens 26 12 designed design VBN cord-347472-n6811ens 26 13 specimen specimen JJ cord-347472-n6811ens 26 14 extraction extraction NN cord-347472-n6811ens 26 15 control control NN cord-347472-n6811ens 26 16 that that WDT cord-347472-n6811ens 26 17 does do VBZ cord-347472-n6811ens 26 18 not not RB cord-347472-n6811ens 26 19 perform perform VB cord-347472-n6811ens 26 20 as as IN cord-347472-n6811ens 26 21 intended intend VBN cord-347472-n6811ens 26 22 on on IN cord-347472-n6811ens 26 23 real real JJ cord-347472-n6811ens 26 24 - - HYPH cord-347472-n6811ens 26 25 world world NN cord-347472-n6811ens 26 26 samples sample NNS cord-347472-n6811ens 26 27 . . . cord-347472-n6811ens 27 1 The the DT cord-347472-n6811ens 27 2 CDC CDC NNP cord-347472-n6811ens 27 3 control control NN cord-347472-n6811ens 27 4 fails fail VBZ cord-347472-n6811ens 27 5 to to IN cord-347472-n6811ens 27 6 reports report NNS cord-347472-n6811ens 27 7 on on IN cord-347472-n6811ens 27 8 specimen specimen NN cord-347472-n6811ens 27 9 and and CC cord-347472-n6811ens 27 10 process process NN cord-347472-n6811ens 27 11 integrity integrity NN cord-347472-n6811ens 27 12 . . . cord-347472-n6811ens 28 1 I -PRON- PRP cord-347472-n6811ens 28 2 alerted alert VBD cord-347472-n6811ens 28 3 the the DT cord-347472-n6811ens 28 4 CDC CDC NNP cord-347472-n6811ens 28 5 to to IN cord-347472-n6811ens 28 6 this this DT cord-347472-n6811ens 28 7 potential potential JJ cord-347472-n6811ens 28 8 problem problem NN cord-347472-n6811ens 28 9 in in IN cord-347472-n6811ens 28 10 March March NNP cord-347472-n6811ens 28 11 of of IN cord-347472-n6811ens 28 12 2020 2020 CD cord-347472-n6811ens 28 13 , , , cord-347472-n6811ens 28 14 supported support VBN cord-347472-n6811ens 28 15 by by IN cord-347472-n6811ens 28 16 bioinformatic bioinformatic JJ cord-347472-n6811ens 28 17 prediction prediction NN cord-347472-n6811ens 28 18 . . . cord-347472-n6811ens 29 1 Their -PRON- PRP$ cord-347472-n6811ens 29 2 response response NN cord-347472-n6811ens 29 3 , , , cord-347472-n6811ens 29 4 sent send VBD cord-347472-n6811ens 29 5 more more JJR cord-347472-n6811ens 29 6 than than IN cord-347472-n6811ens 29 7 a a DT cord-347472-n6811ens 29 8 month month NN cord-347472-n6811ens 29 9 later later RB cord-347472-n6811ens 29 10 , , , cord-347472-n6811ens 29 11 did do VBD cord-347472-n6811ens 29 12 not not RB cord-347472-n6811ens 29 13 share share VB cord-347472-n6811ens 29 14 my -PRON- PRP$ cord-347472-n6811ens 29 15 concerns concern NNS cord-347472-n6811ens 29 16 . . . cord-347472-n6811ens 30 1 One one CD cord-347472-n6811ens 30 2 , , , cord-347472-n6811ens 30 3 the the DT cord-347472-n6811ens 30 4 CDC CDC NNP cord-347472-n6811ens 30 5 had have VBD cord-347472-n6811ens 30 6 not not RB cord-347472-n6811ens 30 7 received receive VBN cord-347472-n6811ens 30 8 widespread widespread JJ cord-347472-n6811ens 30 9 reports report NNS cord-347472-n6811ens 30 10 of of IN cord-347472-n6811ens 30 11 false false JJ cord-347472-n6811ens 30 12 - - HYPH cord-347472-n6811ens 30 13 negative negative JJ cord-347472-n6811ens 30 14 tests test NNS cord-347472-n6811ens 30 15 . . . cord-347472-n6811ens 31 1 Two two CD cord-347472-n6811ens 31 2 , , , cord-347472-n6811ens 31 3 negative negative JJ cord-347472-n6811ens 31 4 patients patient NNS cord-347472-n6811ens 31 5 should should MD cord-347472-n6811ens 31 6 err err VB cord-347472-n6811ens 31 7 on on IN cord-347472-n6811ens 31 8 the the DT cord-347472-n6811ens 31 9 side side NN cord-347472-n6811ens 31 10 of of IN cord-347472-n6811ens 31 11 caution caution NN cord-347472-n6811ens 31 12 and and CC cord-347472-n6811ens 31 13 re re NN cord-347472-n6811ens 31 14 - - NN cord-347472-n6811ens 31 15 test test NN cord-347472-n6811ens 31 16 if if IN cord-347472-n6811ens 31 17 concerned concern VBN cord-347472-n6811ens 31 18 . . . cord-347472-n6811ens 32 1 Three three CD cord-347472-n6811ens 32 2 , , , cord-347472-n6811ens 32 3 the the DT cord-347472-n6811ens 32 4 FDA FDA NNP cord-347472-n6811ens 32 5 had have VBD cord-347472-n6811ens 32 6 approved approve VBN cord-347472-n6811ens 32 7 this this DT cord-347472-n6811ens 32 8 test test NN cord-347472-n6811ens 32 9 , , , cord-347472-n6811ens 32 10 making make VBG cord-347472-n6811ens 32 11 it -PRON- PRP cord-347472-n6811ens 32 12 , , , cord-347472-n6811ens 32 13 de de FW cord-347472-n6811ens 32 14 jure jure NNP cord-347472-n6811ens 32 15 correct correct JJ cord-347472-n6811ens 32 16 ( ( -LRB- cord-347472-n6811ens 32 17 full full JJ cord-347472-n6811ens 32 18 correspondence correspondence NN cord-347472-n6811ens 32 19 in in IN cord-347472-n6811ens 32 20 Supplemental Supplemental NNP cord-347472-n6811ens 32 21 Materials Materials NNP cord-347472-n6811ens 32 22 ) ) -RRB- cord-347472-n6811ens 32 23 . . . cord-347472-n6811ens 33 1 False false JJ cord-347472-n6811ens 33 2 negatives negative NNS cord-347472-n6811ens 33 3 are be VBP cord-347472-n6811ens 33 4 inherently inherently RB cord-347472-n6811ens 33 5 difficult difficult JJ cord-347472-n6811ens 33 6 to to TO cord-347472-n6811ens 33 7 detect detect VB cord-347472-n6811ens 33 8 -particularly -particularly RB cord-347472-n6811ens 33 9 when when WRB cord-347472-n6811ens 33 10 the the DT cord-347472-n6811ens 33 11 assay assay NN cord-347472-n6811ens 33 12 in in IN cord-347472-n6811ens 33 13 question question NN cord-347472-n6811ens 33 14 is be VBZ cord-347472-n6811ens 33 15 the the DT cord-347472-n6811ens 33 16 current current JJ cord-347472-n6811ens 33 17 gold gold NN cord-347472-n6811ens 33 18 standard standard NN cord-347472-n6811ens 33 19 . . . cord-347472-n6811ens 34 1 Testing testing NN cord-347472-n6811ens 34 2 reagents reagent NNS cord-347472-n6811ens 34 3 are be VBP cord-347472-n6811ens 34 4 in in IN cord-347472-n6811ens 34 5 short short JJ cord-347472-n6811ens 34 6 supply supply NN cord-347472-n6811ens 34 7 , , , cord-347472-n6811ens 34 8 making make VBG cord-347472-n6811ens 34 9 it -PRON- PRP cord-347472-n6811ens 34 10 hard hard JJ cord-347472-n6811ens 34 11 for for IN cord-347472-n6811ens 34 12 individuals individual NNS cord-347472-n6811ens 34 13 to to TO cord-347472-n6811ens 34 14 be be VB cord-347472-n6811ens 34 15 tested test VBN cord-347472-n6811ens 34 16 once once RB cord-347472-n6811ens 34 17 , , , cord-347472-n6811ens 34 18 much much RB cord-347472-n6811ens 34 19 less less RBR cord-347472-n6811ens 34 20 repeatedly repeatedly RB cord-347472-n6811ens 34 21 . . . cord-347472-n6811ens 35 1 Official official JJ cord-347472-n6811ens 35 2 approval approval NN cord-347472-n6811ens 35 3 is be VBZ cord-347472-n6811ens 35 4 not not RB cord-347472-n6811ens 35 5 a a DT cord-347472-n6811ens 35 6 defense defense NN cord-347472-n6811ens 35 7 against against IN cord-347472-n6811ens 35 8 facts fact NNS cord-347472-n6811ens 35 9 . . . cord-347472-n6811ens 36 1 As as IN cord-347472-n6811ens 36 2 I -PRON- PRP cord-347472-n6811ens 36 3 show show VBP cord-347472-n6811ens 36 4 below below IN cord-347472-n6811ens 36 5 , , , cord-347472-n6811ens 36 6 the the DT cord-347472-n6811ens 36 7 CDC CDC NNP cord-347472-n6811ens 36 8 design design NN cord-347472-n6811ens 36 9 is be VBZ cord-347472-n6811ens 36 10 both both DT cord-347472-n6811ens 36 11 flawed flawed JJ cord-347472-n6811ens 36 12 and and CC cord-347472-n6811ens 36 13 fixable fixable JJ cord-347472-n6811ens 36 14 . . . cord-347472-n6811ens 37 1 Individuals individual NNS cord-347472-n6811ens 37 2 would would MD cord-347472-n6811ens 37 3 be be VB cord-347472-n6811ens 37 4 incensed incense VBN cord-347472-n6811ens 37 5 by by IN cord-347472-n6811ens 37 6 a a DT cord-347472-n6811ens 37 7 preventable preventable JJ cord-347472-n6811ens 37 8 false false JJ cord-347472-n6811ens 37 9 - - HYPH cord-347472-n6811ens 37 10 positive positive JJ cord-347472-n6811ens 37 11 diagnosis diagnosis NN cord-347472-n6811ens 37 12 putting put VBG cord-347472-n6811ens 37 13 them -PRON- PRP cord-347472-n6811ens 37 14 into into IN cord-347472-n6811ens 37 15 unnecessary unnecessary JJ cord-347472-n6811ens 37 16 quarantine quarantine NN cord-347472-n6811ens 37 17 . . . cord-347472-n6811ens 38 1 The the DT cord-347472-n6811ens 38 2 public public NN cord-347472-n6811ens 38 3 should should MD cord-347472-n6811ens 38 4 be be VB cord-347472-n6811ens 38 5 incensed incense VBN cord-347472-n6811ens 38 6 by by IN cord-347472-n6811ens 38 7 a a DT cord-347472-n6811ens 38 8 poorly poorly RB cord-347472-n6811ens 38 9 designed design VBN cord-347472-n6811ens 38 10 official official JJ cord-347472-n6811ens 38 11 assay assay NN cord-347472-n6811ens 38 12 whose whose WP$ cord-347472-n6811ens 38 13 preventable preventable JJ cord-347472-n6811ens 38 14 false false JJ cord-347472-n6811ens 38 15 - - HYPH cord-347472-n6811ens 38 16 negative negative JJ cord-347472-n6811ens 38 17 diagnoses diagnosis NNS cord-347472-n6811ens 38 18 allow allow VBP cord-347472-n6811ens 38 19 virus virus NN cord-347472-n6811ens 38 20 - - HYPH cord-347472-n6811ens 38 21 positive positive JJ cord-347472-n6811ens 38 22 patients patient NNS cord-347472-n6811ens 38 23 back back RB cord-347472-n6811ens 38 24 into into IN cord-347472-n6811ens 38 25 society society NN cord-347472-n6811ens 38 26 . . . cord-347472-n6811ens 39 1 The the DT cord-347472-n6811ens 39 2 2019-nCoV 2019-ncov CD cord-347472-n6811ens 39 3 Real Real NNP cord-347472-n6811ens 39 4 - - HYPH cord-347472-n6811ens 39 5 Time time NN cord-347472-n6811ens 39 6 RT RT NNP cord-347472-n6811ens 39 7 - - HYPH cord-347472-n6811ens 39 8 PCR PCR NNP cord-347472-n6811ens 39 9 Diagnostic Diagnostic NNP cord-347472-n6811ens 39 10 Panel Panel NNP cord-347472-n6811ens 39 11 is be VBZ cord-347472-n6811ens 39 12 a a DT cord-347472-n6811ens 39 13 CDC CDC NNP cord-347472-n6811ens 39 14 - - HYPH cord-347472-n6811ens 39 15 designed design VBN cord-347472-n6811ens 39 16 and and CC cord-347472-n6811ens 39 17 validated validate VBD cord-347472-n6811ens 39 18 COVID-19 COVID-19 NNP cord-347472-n6811ens 39 19 assay assay NN cord-347472-n6811ens 39 20 comprised comprise VBN cord-347472-n6811ens 39 21 of of IN cord-347472-n6811ens 39 22 three three CD cord-347472-n6811ens 39 23 qPCR qPCR NNP cord-347472-n6811ens 39 24 primer primer NN cord-347472-n6811ens 39 25 / / SYM cord-347472-n6811ens 39 26 probe probe NN cord-347472-n6811ens 39 27 sets set NNS cord-347472-n6811ens 39 28 . . . cord-347472-n6811ens 40 1 N1 N1 NNP cord-347472-n6811ens 40 2 and and CC cord-347472-n6811ens 40 3 N2 N2 NNP cord-347472-n6811ens 40 4 generate generate VB cord-347472-n6811ens 40 5 SARS SARS NNP cord-347472-n6811ens 40 6 - - HYPH cord-347472-n6811ens 40 7 CoV-2-specific CoV-2-specific NNP cord-347472-n6811ens 40 8 amplicons amplicon NNS cord-347472-n6811ens 40 9 from from IN cord-347472-n6811ens 40 10 reverse reverse NN cord-347472-n6811ens 40 11 transcribed transcribe VBN cord-347472-n6811ens 40 12 viral viral JJ cord-347472-n6811ens 40 13 RNA RNA NNP cord-347472-n6811ens 40 14 . . . cord-347472-n6811ens 41 1 The the DT cord-347472-n6811ens 41 2 third third JJ cord-347472-n6811ens 41 3 , , , cord-347472-n6811ens 41 4 RP RP NNP cord-347472-n6811ens 41 5 , , , cord-347472-n6811ens 41 6 targets target VBZ cord-347472-n6811ens 41 7 the the DT cord-347472-n6811ens 41 8 human human NN cord-347472-n6811ens 41 9 RPP30 rpp30 IN cord-347472-n6811ens 41 10 gene gene NN cord-347472-n6811ens 41 11 and and CC cord-347472-n6811ens 41 12 is be VBZ cord-347472-n6811ens 41 13 an an DT cord-347472-n6811ens 41 14 " " `` cord-347472-n6811ens 41 15 extraction extraction NN cord-347472-n6811ens 41 16 control control NN cord-347472-n6811ens 41 17 " " '' cord-347472-n6811ens 41 18 that that WDT cord-347472-n6811ens 41 19 is be VBZ cord-347472-n6811ens 41 20 intended intend VBN cord-347472-n6811ens 41 21 and and CC cord-347472-n6811ens 41 22 claimed claim VBN cord-347472-n6811ens 41 23 to to TO cord-347472-n6811ens 41 24 inform inform VB cord-347472-n6811ens 41 25 about about IN cord-347472-n6811ens 41 26 successful successful JJ cord-347472-n6811ens 41 27 sample sample NN cord-347472-n6811ens 41 28 collection collection NN cord-347472-n6811ens 41 29 , , , cord-347472-n6811ens 41 30 RNA RNA NNP cord-347472-n6811ens 41 31 extraction extraction NN cord-347472-n6811ens 41 32 , , , cord-347472-n6811ens 41 33 and and CC cord-347472-n6811ens 41 34 reverse reverse VB cord-347472-n6811ens 41 35 transcription transcription NN cord-347472-n6811ens 41 36 ( ( -LRB- cord-347472-n6811ens 41 37 3 3 CD cord-347472-n6811ens 41 38 ) ) -RRB- cord-347472-n6811ens 41 39 . . . cord-347472-n6811ens 42 1 It -PRON- PRP cord-347472-n6811ens 42 2 does do VBZ cord-347472-n6811ens 42 3 not not RB cord-347472-n6811ens 42 4 perform perform VB cord-347472-n6811ens 42 5 these these DT cord-347472-n6811ens 42 6 functions function NNS cord-347472-n6811ens 42 7 in in IN cord-347472-n6811ens 42 8 practice practice NN cord-347472-n6811ens 42 9 . . . cord-347472-n6811ens 43 1 The the DT cord-347472-n6811ens 43 2 CDC CDC NNP cord-347472-n6811ens 43 3 design design NN cord-347472-n6811ens 43 4 is be VBZ cord-347472-n6811ens 43 5 fundamentally fundamentally RB cord-347472-n6811ens 43 6 flawed flawed JJ cord-347472-n6811ens 43 7 and and CC cord-347472-n6811ens 43 8 has have VBZ cord-347472-n6811ens 43 9 the the DT cord-347472-n6811ens 43 10 potential potential NN cord-347472-n6811ens 43 11 to to TO cord-347472-n6811ens 43 12 return return VB cord-347472-n6811ens 43 13 dangerous dangerous JJ cord-347472-n6811ens 43 14 false false JJ cord-347472-n6811ens 43 15 negatives negative NNS cord-347472-n6811ens 43 16 ( ( -LRB- cord-347472-n6811ens 43 17 Fig Fig NNP cord-347472-n6811ens 43 18 . . . cord-347472-n6811ens 43 19 1A 1a NN cord-347472-n6811ens 43 20 ) ) -RRB- cord-347472-n6811ens 43 21 . . . cord-347472-n6811ens 44 1 The the DT cord-347472-n6811ens 44 2 CDC CDC NNP cord-347472-n6811ens 44 3 - - HYPH cord-347472-n6811ens 44 4 specified specify VBN cord-347472-n6811ens 44 5 RP rp NN cord-347472-n6811ens 44 6 extraction extraction NN cord-347472-n6811ens 44 7 control control NN cord-347472-n6811ens 44 8 design design NN cord-347472-n6811ens 44 9 generates generate VBZ cord-347472-n6811ens 44 10 identical identical JJ cord-347472-n6811ens 44 11 amplicons amplicon NNS cord-347472-n6811ens 44 12 from from IN cord-347472-n6811ens 44 13 reverse reverse NN cord-347472-n6811ens 44 14 transcribed transcribe VBN cord-347472-n6811ens 44 15 RNA RNA NNP cord-347472-n6811ens 44 16 and and CC cord-347472-n6811ens 44 17 human human JJ cord-347472-n6811ens 44 18 genomic genomic JJ cord-347472-n6811ens 44 19 DNA dna NN cord-347472-n6811ens 44 20 . . . cord-347472-n6811ens 45 1 Megablast Megablast NNP cord-347472-n6811ens 45 2 ( ( -LRB- cord-347472-n6811ens 45 3 4 4 LS cord-347472-n6811ens 45 4 ) ) -RRB- cord-347472-n6811ens 45 5 search search NN cord-347472-n6811ens 45 6 of of IN cord-347472-n6811ens 45 7 the the DT cord-347472-n6811ens 45 8 RP RP NNP cord-347472-n6811ens 45 9 forward forward RB cord-347472-n6811ens 45 10 , , , cord-347472-n6811ens 45 11 reverse reverse JJ cord-347472-n6811ens 45 12 , , , cord-347472-n6811ens 45 13 and and CC cord-347472-n6811ens 45 14 probe probe VB cord-347472-n6811ens 45 15 sequences sequence NNS cord-347472-n6811ens 45 16 against against IN cord-347472-n6811ens 45 17 the the DT cord-347472-n6811ens 45 18 human human JJ cord-347472-n6811ens 45 19 refseq_rna refseq_rna NNP cord-347472-n6811ens 45 20 transcript transcript NN cord-347472-n6811ens 45 21 database database NN cord-347472-n6811ens 45 22 identifies identify VBZ cord-347472-n6811ens 45 23 perfect perfect JJ cord-347472-n6811ens 45 24 matches match NNS cord-347472-n6811ens 45 25 within within IN cord-347472-n6811ens 45 26 the the DT cord-347472-n6811ens 45 27 RPP30 RPP30 NNP cord-347472-n6811ens 45 28 mRNA mrna NN cord-347472-n6811ens 45 29 . . . cord-347472-n6811ens 46 1 The the DT cord-347472-n6811ens 46 2 design design NN cord-347472-n6811ens 46 3 recognizes recognize VBZ cord-347472-n6811ens 46 4 sequences sequence NNS cord-347472-n6811ens 46 5 that that WDT cord-347472-n6811ens 46 6 are be VBP cord-347472-n6811ens 46 7 entirely entirely RB cord-347472-n6811ens 46 8 contained contain VBN cord-347472-n6811ens 46 9 within within IN cord-347472-n6811ens 46 10 a a DT cord-347472-n6811ens 46 11 single single JJ cord-347472-n6811ens 46 12 exon exon NN cord-347472-n6811ens 46 13 , , , cord-347472-n6811ens 46 14 and and CC cord-347472-n6811ens 46 15 therefore therefore RB cord-347472-n6811ens 46 16 generates generate VBZ cord-347472-n6811ens 46 17 an an DT cord-347472-n6811ens 46 18 identical identical JJ cord-347472-n6811ens 46 19 amplicon amplicon NN cord-347472-n6811ens 46 20 from from IN cord-347472-n6811ens 46 21 the the DT cord-347472-n6811ens 46 22 RPP30 RPP30 NNP cord-347472-n6811ens 46 23 genomic genomic JJ cord-347472-n6811ens 46 24 locus locus NN cord-347472-n6811ens 46 25 ( ( -LRB- cord-347472-n6811ens 46 26 Fig Fig NNP cord-347472-n6811ens 46 27 . . . cord-347472-n6811ens 46 28 _SP cord-347472-n6811ens 46 29 1B 1b CD cord-347472-n6811ens 46 30 ) ) -RRB- cord-347472-n6811ens 46 31 . . . cord-347472-n6811ens 47 1 The the DT cord-347472-n6811ens 47 2 CDC CDC NNP cord-347472-n6811ens 47 3 extraction extraction NN cord-347472-n6811ens 47 4 control control NN cord-347472-n6811ens 47 5 generates generate VBZ cord-347472-n6811ens 47 6 a a DT cord-347472-n6811ens 47 7 positive positive JJ cord-347472-n6811ens 47 8 signal signal NN cord-347472-n6811ens 47 9 in in IN cord-347472-n6811ens 47 10 reactions reaction NNS cord-347472-n6811ens 47 11 containing contain VBG cord-347472-n6811ens 47 12 intact intact JJ cord-347472-n6811ens 47 13 RNA RNA NNP cord-347472-n6811ens 47 14 . . . cord-347472-n6811ens 48 1 It -PRON- PRP cord-347472-n6811ens 48 2 also also RB cord-347472-n6811ens 48 3 generates generate VBZ cord-347472-n6811ens 48 4 a a DT cord-347472-n6811ens 48 5 positive positive JJ cord-347472-n6811ens 48 6 signal signal NN cord-347472-n6811ens 48 7 from from IN cord-347472-n6811ens 48 8 RNA rna NN cord-347472-n6811ens 48 9 - - HYPH cord-347472-n6811ens 48 10 free free JJ cord-347472-n6811ens 48 11 reactions reaction NNS cord-347472-n6811ens 48 12 containing contain VBG cord-347472-n6811ens 48 13 human human JJ cord-347472-n6811ens 48 14 genomic genomic JJ cord-347472-n6811ens 48 15 DNA dna NN cord-347472-n6811ens 48 16 ( ( -LRB- cord-347472-n6811ens 48 17 Fig Fig NNP cord-347472-n6811ens 48 18 . . . cord-347472-n6811ens 48 19 S1 S1 NNP cord-347472-n6811ens 48 20 ) ) -RRB- cord-347472-n6811ens 48 21 . . . cord-347472-n6811ens 49 1 Genomic genomic JJ cord-347472-n6811ens 49 2 DNA dna NN cord-347472-n6811ens 49 3 is be VBZ cord-347472-n6811ens 49 4 co co VBN cord-347472-n6811ens 49 5 - - JJ cord-347472-n6811ens 49 6 purified purify VBN cord-347472-n6811ens 49 7 in in IN cord-347472-n6811ens 49 8 quantities quantity NNS cord-347472-n6811ens 49 9 sufficient sufficient JJ cord-347472-n6811ens 49 10 to to TO cord-347472-n6811ens 49 11 generate generate VB cord-347472-n6811ens 49 12 strong strong JJ cord-347472-n6811ens 49 13 positive positive JJ cord-347472-n6811ens 49 14 signals signal NNS cord-347472-n6811ens 49 15 for for IN cord-347472-n6811ens 49 16 the the DT cord-347472-n6811ens 49 17 CDC CDC NNP cord-347472-n6811ens 49 18 - - HYPH cord-347472-n6811ens 49 19 specified specify VBN cord-347472-n6811ens 49 20 extraction extraction NN cord-347472-n6811ens 49 21 control control NN cord-347472-n6811ens 49 22 during during IN cord-347472-n6811ens 49 23 work work NN cord-347472-n6811ens 49 24 - - HYPH cord-347472-n6811ens 49 25 up up NN cord-347472-n6811ens 49 26 of of IN cord-347472-n6811ens 49 27 clinical clinical JJ cord-347472-n6811ens 49 28 RNA RNA NNP cord-347472-n6811ens 49 29 specimens specimen NNS cord-347472-n6811ens 49 30 . . . cord-347472-n6811ens 50 1 To to TO cord-347472-n6811ens 50 2 test test VB cord-347472-n6811ens 50 3 for for IN cord-347472-n6811ens 50 4 the the DT cord-347472-n6811ens 50 5 presence presence NN cord-347472-n6811ens 50 6 of of IN cord-347472-n6811ens 50 7 control control NN cord-347472-n6811ens 50 8 - - HYPH cord-347472-n6811ens 50 9 affecting affect VBG cord-347472-n6811ens 50 10 DNA dna NN cord-347472-n6811ens 50 11 , , , cord-347472-n6811ens 50 12 qPCR qpcr JJ cord-347472-n6811ens 50 13 reactions reaction NNS cord-347472-n6811ens 50 14 lacking lack VBG cord-347472-n6811ens 51 1 reverse reverse JJ cord-347472-n6811ens 51 2 transcriptase transcriptase NNP cord-347472-n6811ens 51 3 were be VBD cord-347472-n6811ens 51 4 performed perform VBN cord-347472-n6811ens 51 5 on on IN cord-347472-n6811ens 51 6 SARS SARS NNP cord-347472-n6811ens 51 7 - - HYPH cord-347472-n6811ens 51 8 CoV-2-positive cov-2-positive JJ cord-347472-n6811ens 51 9 clinical clinical JJ cord-347472-n6811ens 51 10 samples sample NNS cord-347472-n6811ens 51 11 using use VBG cord-347472-n6811ens 51 12 the the DT cord-347472-n6811ens 51 13 CDC CDC NNP cord-347472-n6811ens 51 14 - - HYPH cord-347472-n6811ens 51 15 specified specify VBN cord-347472-n6811ens 51 16 RP RP NNP cord-347472-n6811ens 51 17 primer primer NN cord-347472-n6811ens 51 18 and and CC cord-347472-n6811ens 51 19 probe probe NN cord-347472-n6811ens 51 20 . . . cord-347472-n6811ens 51 21 " " '' cord-347472-n6811ens 52 1 Purified Purified NNP cord-347472-n6811ens 52 2 RNA RNA NNP cord-347472-n6811ens 52 3 " " '' cord-347472-n6811ens 52 4 samples sample NNS cord-347472-n6811ens 52 5 from from IN cord-347472-n6811ens 52 6 COVID-19 covid-19 JJ cord-347472-n6811ens 52 7 cases case NNS cord-347472-n6811ens 52 8 were be VBD cord-347472-n6811ens 52 9 obtained obtain VBN cord-347472-n6811ens 52 10 from from IN cord-347472-n6811ens 52 11 a a DT cord-347472-n6811ens 52 12 CAP cap NN cord-347472-n6811ens 52 13 / / SYM cord-347472-n6811ens 52 14 CLIA CLIA NNP cord-347472-n6811ens 52 15 certified certify VBN cord-347472-n6811ens 52 16 university university NN cord-347472-n6811ens 52 17 hospital hospital NN cord-347472-n6811ens 52 18 molecular molecular JJ cord-347472-n6811ens 52 19 pathology pathology NN cord-347472-n6811ens 52 20 laboratory laboratory NN cord-347472-n6811ens 52 21 . . . cord-347472-n6811ens 53 1 Samples sample NNS cord-347472-n6811ens 53 2 had have VBD cord-347472-n6811ens 53 3 been be VBN cord-347472-n6811ens 53 4 processed process VBN cord-347472-n6811ens 53 5 using use VBG cord-347472-n6811ens 53 6 either either CC cord-347472-n6811ens 53 7 solid solid JJ cord-347472-n6811ens 53 8 phase phase NN cord-347472-n6811ens 53 9 extraction extraction NN cord-347472-n6811ens 53 10 ( ( -LRB- cord-347472-n6811ens 53 11 Qiagen Qiagen NNP cord-347472-n6811ens 53 12 ) ) -RRB- cord-347472-n6811ens 53 13 or or CC cord-347472-n6811ens 53 14 low low JJ cord-347472-n6811ens 53 15 pH pH NNP cord-347472-n6811ens 53 16 organic organic JJ cord-347472-n6811ens 53 17 extraction extraction NN cord-347472-n6811ens 53 18 ( ( -LRB- cord-347472-n6811ens 53 19 Trizol Trizol NNP cord-347472-n6811ens 53 20 ) ) -RRB- cord-347472-n6811ens 53 21 . . . cord-347472-n6811ens 54 1 Both both DT cord-347472-n6811ens 54 2 methods method NNS cord-347472-n6811ens 54 3 are be VBP cord-347472-n6811ens 54 4 permitted permit VBN cord-347472-n6811ens 54 5 under under IN cord-347472-n6811ens 54 6 current current JJ cord-347472-n6811ens 54 7 Emergency Emergency NNP cord-347472-n6811ens 54 8 Use Use NNP cord-347472-n6811ens 54 9 Authorization Authorization NNP cord-347472-n6811ens 54 10 ( ( -LRB- cord-347472-n6811ens 54 11 EUA EUA NNP cord-347472-n6811ens 54 12 ) ) -RRB- cord-347472-n6811ens 54 13 for for IN cord-347472-n6811ens 54 14 RNA rna NN cord-347472-n6811ens 54 15 isolation isolation NN cord-347472-n6811ens 54 16 . . . cord-347472-n6811ens 55 1 In in IN cord-347472-n6811ens 55 2 reality reality NN cord-347472-n6811ens 55 3 , , , cord-347472-n6811ens 55 4 both both DT cord-347472-n6811ens 55 5 methods method NNS cord-347472-n6811ens 55 6 co co VBP cord-347472-n6811ens 55 7 - - VB cord-347472-n6811ens 55 8 purify purify VB cord-347472-n6811ens 55 9 significant significant JJ cord-347472-n6811ens 55 10 amounts amount NNS cord-347472-n6811ens 55 11 of of IN cord-347472-n6811ens 55 12 DNA dna NN cord-347472-n6811ens 55 13 ( ( -LRB- cord-347472-n6811ens 55 14 5 5 CD cord-347472-n6811ens 55 15 ) ) -RRB- cord-347472-n6811ens 55 16 . . . cord-347472-n6811ens 56 1 All all DT cord-347472-n6811ens 56 2 clinical clinical JJ cord-347472-n6811ens 56 3 samples sample NNS cord-347472-n6811ens 56 4 tested test VBN cord-347472-n6811ens 56 5 generated generate VBD cord-347472-n6811ens 56 6 unambiguous unambiguous JJ cord-347472-n6811ens 56 7 extraction extraction NN cord-347472-n6811ens 56 8 control control NN cord-347472-n6811ens 56 9 positive positive JJ cord-347472-n6811ens 56 10 signals signal NNS cord-347472-n6811ens 56 11 in in IN cord-347472-n6811ens 56 12 the the DT cord-347472-n6811ens 56 13 absence absence NN cord-347472-n6811ens 56 14 of of IN cord-347472-n6811ens 56 15 reverse reverse JJ cord-347472-n6811ens 56 16 transcription transcription NN cord-347472-n6811ens 56 17 , , , cord-347472-n6811ens 56 18 a a DT cord-347472-n6811ens 56 19 reaction reaction NN cord-347472-n6811ens 56 20 context context NN cord-347472-n6811ens 56 21 that that WDT cord-347472-n6811ens 56 22 could could MD cord-347472-n6811ens 56 23 not not RB cord-347472-n6811ens 56 24 have have VB cord-347472-n6811ens 56 25 detected detect VBN cord-347472-n6811ens 56 26 virus virus NN cord-347472-n6811ens 56 27 an an DT cord-347472-n6811ens 56 28 RNA RNA NNP cord-347472-n6811ens 56 29 virus virus NN cord-347472-n6811ens 56 30 ( ( -LRB- cord-347472-n6811ens 56 31 Fig Fig NNP cord-347472-n6811ens 56 32 . . . cord-347472-n6811ens 56 33 2A 2a CD cord-347472-n6811ens 56 34 ) ) -RRB- cord-347472-n6811ens 57 1 Single single JJ cord-347472-n6811ens 57 2 - - HYPH cord-347472-n6811ens 57 3 digit digit NN cord-347472-n6811ens 57 4 copies copy NNS cord-347472-n6811ens 57 5 of of IN cord-347472-n6811ens 57 6 genomic genomic JJ cord-347472-n6811ens 57 7 DNA dna NN cord-347472-n6811ens 57 8 are be VBP cord-347472-n6811ens 57 9 sufficient sufficient JJ cord-347472-n6811ens 57 10 to to TO cord-347472-n6811ens 57 11 generate generate VB cord-347472-n6811ens 57 12 a a DT cord-347472-n6811ens 57 13 positive positive JJ cord-347472-n6811ens 57 14 control control NN cord-347472-n6811ens 57 15 signal signal NN cord-347472-n6811ens 57 16 using use VBG cord-347472-n6811ens 57 17 the the DT cord-347472-n6811ens 57 18 CDC CDC NNP cord-347472-n6811ens 57 19 - - HYPH cord-347472-n6811ens 57 20 designed design VBN cord-347472-n6811ens 57 21 assay assay NN cord-347472-n6811ens 57 22 . . . cord-347472-n6811ens 58 1 Driven drive VBN cord-347472-n6811ens 58 2 by by IN cord-347472-n6811ens 58 3 concern concern NN cord-347472-n6811ens 58 4 about about IN cord-347472-n6811ens 58 5 the the DT cord-347472-n6811ens 58 6 control control NN cord-347472-n6811ens 58 7 probe probe NN cord-347472-n6811ens 58 8 signals signal NNS cord-347472-n6811ens 58 9 observed observe VBN cord-347472-n6811ens 58 10 in in IN cord-347472-n6811ens 58 11 PCR PCR NNP cord-347472-n6811ens 58 12 - - HYPH cord-347472-n6811ens 58 13 only only JJ cord-347472-n6811ens 58 14 analysis analysis NN cord-347472-n6811ens 58 15 , , , cord-347472-n6811ens 58 16 I -PRON- PRP cord-347472-n6811ens 58 17 determined determine VBD cord-347472-n6811ens 58 18 the the DT cord-347472-n6811ens 58 19 quantity quantity NN cord-347472-n6811ens 58 20 of of IN cord-347472-n6811ens 58 21 genomic genomic JJ cord-347472-n6811ens 58 22 DNA dna NN cord-347472-n6811ens 58 23 required require VBN cord-347472-n6811ens 58 24 to to TO cord-347472-n6811ens 58 25 generate generate VB cord-347472-n6811ens 58 26 an an DT cord-347472-n6811ens 58 27 assay assay NN cord-347472-n6811ens 58 28 - - HYPH cord-347472-n6811ens 58 29 positive positive JJ cord-347472-n6811ens 58 30 control control NN cord-347472-n6811ens 58 31 signal signal NN cord-347472-n6811ens 58 32 . . . cord-347472-n6811ens 59 1 Commercially commercially RB cord-347472-n6811ens 59 2 supplied supply VBN cord-347472-n6811ens 59 3 , , , cord-347472-n6811ens 59 4 pooled pool VBN cord-347472-n6811ens 59 5 human human JJ cord-347472-n6811ens 59 6 DNA dna NN cord-347472-n6811ens 59 7 was be VBD cord-347472-n6811ens 59 8 serially serially RB cord-347472-n6811ens 59 9 diluted dilute VBN cord-347472-n6811ens 59 10 across across IN cord-347472-n6811ens 59 11 several several JJ cord-347472-n6811ens 59 12 orders order NNS cord-347472-n6811ens 59 13 of of IN cord-347472-n6811ens 59 14 magnitude magnitude NN cord-347472-n6811ens 59 15 and and CC cord-347472-n6811ens 59 16 analyzed analyze VBN cord-347472-n6811ens 59 17 by by IN cord-347472-n6811ens 59 18 the the DT cord-347472-n6811ens 59 19 same same JJ cord-347472-n6811ens 59 20 one one CD cord-347472-n6811ens 59 21 - - HYPH cord-347472-n6811ens 59 22 step step NN cord-347472-n6811ens 59 23 RT RT NNP cord-347472-n6811ens 59 24 - - HYPH cord-347472-n6811ens 59 25 qPCR qPCR NNP cord-347472-n6811ens 59 26 used use VBN cord-347472-n6811ens 59 27 for for IN cord-347472-n6811ens 59 28 clinical clinical JJ cord-347472-n6811ens 59 29 samples sample NNS cord-347472-n6811ens 59 30 ( ( -LRB- cord-347472-n6811ens 59 31 Fig Fig NNP cord-347472-n6811ens 59 32 . . . cord-347472-n6811ens 59 33 _SP cord-347472-n6811ens 59 34 2B 2b CD cord-347472-n6811ens 59 35 ) ) -RRB- cord-347472-n6811ens 59 36 . . . cord-347472-n6811ens 60 1 Extrapolating extrapolate VBG cord-347472-n6811ens 60 2 from from IN cord-347472-n6811ens 60 3 pure pure JJ cord-347472-n6811ens 60 4 - - HYPH cord-347472-n6811ens 60 5 DNA dna NN cord-347472-n6811ens 60 6 samples sample NNS cord-347472-n6811ens 60 7 , , , cord-347472-n6811ens 60 8 a a DT cord-347472-n6811ens 60 9 positive positive JJ cord-347472-n6811ens 60 10 signal signal NN cord-347472-n6811ens 60 11 from from IN cord-347472-n6811ens 60 12 the the DT cord-347472-n6811ens 60 13 CDC CDC NNP cord-347472-n6811ens 60 14 control control NN cord-347472-n6811ens 60 15 would would MD cord-347472-n6811ens 60 16 be be VB cord-347472-n6811ens 60 17 readily readily RB cord-347472-n6811ens 60 18 achieved achieve VBN cord-347472-n6811ens 60 19 in in IN cord-347472-n6811ens 60 20 samples sample NNS cord-347472-n6811ens 60 21 containing contain VBG cord-347472-n6811ens 60 22 one one CD cord-347472-n6811ens 60 23 copy copy NN cord-347472-n6811ens 60 24 of of IN cord-347472-n6811ens 60 25 the the DT cord-347472-n6811ens 60 26 genome genome NN cord-347472-n6811ens 60 27 copy copy NN cord-347472-n6811ens 60 28 per per IN cord-347472-n6811ens 60 29 reaction reaction NN cord-347472-n6811ens 60 30 ( ( -LRB- cord-347472-n6811ens 60 31 7 7 CD cord-347472-n6811ens 60 32 ) ) -RRB- cord-347472-n6811ens 60 33 . . . cord-347472-n6811ens 61 1 Due due IN cord-347472-n6811ens 61 2 to to IN cord-347472-n6811ens 61 3 the the DT cord-347472-n6811ens 61 4 presence presence NN cord-347472-n6811ens 61 5 of of IN cord-347472-n6811ens 61 6 co co JJ cord-347472-n6811ens 61 7 - - JJ cord-347472-n6811ens 61 8 purifying purifying JJ cord-347472-n6811ens 61 9 genomic genomic JJ cord-347472-n6811ens 61 10 DNA dna NN cord-347472-n6811ens 61 11 in in IN cord-347472-n6811ens 61 12 clinical clinical JJ cord-347472-n6811ens 61 13 samples sample NNS cord-347472-n6811ens 61 14 , , , cord-347472-n6811ens 61 15 loss loss NN cord-347472-n6811ens 61 16 of of IN cord-347472-n6811ens 61 17 RNA RNA NNP cord-347472-n6811ens 61 18 integrity integrity NN cord-347472-n6811ens 61 19 leads lead VBZ cord-347472-n6811ens 61 20 to to IN cord-347472-n6811ens 61 21 false false JJ cord-347472-n6811ens 61 22 - - HYPH cord-347472-n6811ens 61 23 negative negative JJ cord-347472-n6811ens 61 24 results result NNS cord-347472-n6811ens 61 25 using use VBG cord-347472-n6811ens 61 26 the the DT cord-347472-n6811ens 61 27 CDC CDC NNP cord-347472-n6811ens 61 28 - - HYPH cord-347472-n6811ens 61 29 specified specify VBN cord-347472-n6811ens 61 30 control control NN cord-347472-n6811ens 61 31 . . . cord-347472-n6811ens 62 1 RNA RNA NNP cord-347472-n6811ens 62 2 , , , cord-347472-n6811ens 62 3 including include VBG cord-347472-n6811ens 62 4 the the DT cord-347472-n6811ens 62 5 genome genome NN cord-347472-n6811ens 62 6 of of IN cord-347472-n6811ens 62 7 the the DT cord-347472-n6811ens 62 8 SARS SARS NNP cord-347472-n6811ens 62 9 - - HYPH cord-347472-n6811ens 62 10 CoV-2 CoV-2 NNP cord-347472-n6811ens 62 11 virus virus NN cord-347472-n6811ens 62 12 , , , cord-347472-n6811ens 62 13 is be VBZ cord-347472-n6811ens 62 14 intrinsically intrinsically RB cord-347472-n6811ens 62 15 more more RBR cord-347472-n6811ens 62 16 labile labile JJ cord-347472-n6811ens 62 17 than than IN cord-347472-n6811ens 62 18 DNA DNA NNP cord-347472-n6811ens 62 19 . . . cord-347472-n6811ens 63 1 RNA rna NN cord-347472-n6811ens 63 2 - - HYPH cord-347472-n6811ens 63 3 degrading degrade VBG cord-347472-n6811ens 63 4 enzymes enzyme NNS cord-347472-n6811ens 63 5 ( ( -LRB- cord-347472-n6811ens 63 6 RNases RNases NNP cord-347472-n6811ens 63 7 ) ) -RRB- cord-347472-n6811ens 63 8 rapidly rapidly RB cord-347472-n6811ens 63 9 hydrolyze hydrolyze VBP cord-347472-n6811ens 63 10 RNA RNA NNP cord-347472-n6811ens 63 11 while while IN cord-347472-n6811ens 63 12 leaving leave VBG cord-347472-n6811ens 63 13 DNA dna NN cord-347472-n6811ens 63 14 intact intact JJ cord-347472-n6811ens 63 15 . . . cord-347472-n6811ens 64 1 Laboratory laboratory NN cord-347472-n6811ens 64 2 procedures procedure NNS cord-347472-n6811ens 64 3 that that WDT cord-347472-n6811ens 64 4 manipulate manipulate VBP cord-347472-n6811ens 64 5 RNA RNA NNP cord-347472-n6811ens 64 6 , , , cord-347472-n6811ens 64 7 including include VBG cord-347472-n6811ens 64 8 methods method NNS cord-347472-n6811ens 64 9 specified specify VBN cord-347472-n6811ens 64 10 in in IN cord-347472-n6811ens 64 11 the the DT cord-347472-n6811ens 64 12 CDC CDC NNP cord-347472-n6811ens 64 13 EUA EUA NNP cord-347472-n6811ens 64 14 , , , cord-347472-n6811ens 64 15 require require VBP cord-347472-n6811ens 64 16 careful careful JJ cord-347472-n6811ens 64 17 sample sample NN cord-347472-n6811ens 64 18 , , , cord-347472-n6811ens 64 19 reagent reagent NN cord-347472-n6811ens 64 20 , , , cord-347472-n6811ens 64 21 and and CC cord-347472-n6811ens 64 22 consumable consumable JJ cord-347472-n6811ens 64 23 handling handling NN cord-347472-n6811ens 64 24 to to TO cord-347472-n6811ens 64 25 avoid avoid VB cord-347472-n6811ens 64 26 introduction introduction NN cord-347472-n6811ens 64 27 of of IN cord-347472-n6811ens 64 28 ubiquitous ubiquitous JJ cord-347472-n6811ens 64 29 environmental environmental JJ cord-347472-n6811ens 64 30 or or CC cord-347472-n6811ens 64 31 personnel personnel NNS cord-347472-n6811ens 64 32 - - HYPH cord-347472-n6811ens 64 33 derived derive VBN cord-347472-n6811ens 64 34 RNases rnase NNS cord-347472-n6811ens 64 35 . . . cord-347472-n6811ens 65 1 Loss loss NN cord-347472-n6811ens 65 2 of of IN cord-347472-n6811ens 65 3 RNA RNA NNP cord-347472-n6811ens 65 4 integrity integrity NN cord-347472-n6811ens 65 5 , , , cord-347472-n6811ens 65 6 accomplished accomplish VBN cord-347472-n6811ens 65 7 here here RB cord-347472-n6811ens 65 8 by by IN cord-347472-n6811ens 65 9 intentional intentional JJ cord-347472-n6811ens 65 10 exposure exposure NN cord-347472-n6811ens 65 11 to to IN cord-347472-n6811ens 65 12 RNase rnase NN cord-347472-n6811ens 65 13 , , , cord-347472-n6811ens 65 14 causes cause VBZ cord-347472-n6811ens 65 15 virus virus NN cord-347472-n6811ens 65 16 - - HYPH cord-347472-n6811ens 65 17 positive positive JJ cord-347472-n6811ens 65 18 clinical clinical JJ cord-347472-n6811ens 65 19 samples sample NNS cord-347472-n6811ens 65 20 to to TO cord-347472-n6811ens 65 21 return return VB cord-347472-n6811ens 65 22 a a DT cord-347472-n6811ens 65 23 false false JJ cord-347472-n6811ens 65 24 - - HYPH cord-347472-n6811ens 65 25 negative negative JJ cord-347472-n6811ens 65 26 " " `` cord-347472-n6811ens 65 27 extraction extraction NN cord-347472-n6811ens 65 28 control control NN cord-347472-n6811ens 65 29 positive positive JJ cord-347472-n6811ens 65 30 , , , cord-347472-n6811ens 65 31 virus virus NN cord-347472-n6811ens 65 32 negative negative JJ cord-347472-n6811ens 65 33 " " '' cord-347472-n6811ens 65 34 result result NN cord-347472-n6811ens 65 35 using use VBG cord-347472-n6811ens 65 36 the the DT cord-347472-n6811ens 65 37 CDC CDC NNP cord-347472-n6811ens 65 38 - - HYPH cord-347472-n6811ens 65 39 design design NN cord-347472-n6811ens 65 40 ( ( -LRB- cord-347472-n6811ens 65 41 Fig Fig NNP cord-347472-n6811ens 65 42 . . . cord-347472-n6811ens 65 43 3 3 CD cord-347472-n6811ens 65 44 ) ) -RRB- cord-347472-n6811ens 65 45 . . . cord-347472-n6811ens 66 1 Assays assay NNS cord-347472-n6811ens 66 2 can can MD cord-347472-n6811ens 66 3 be be VB cord-347472-n6811ens 66 4 designed design VBN cord-347472-n6811ens 66 5 to to TO cord-347472-n6811ens 66 6 specifically specifically RB cord-347472-n6811ens 66 7 detect detect VB cord-347472-n6811ens 66 8 mature mature JJ cord-347472-n6811ens 66 9 mRNA mrna NN cord-347472-n6811ens 66 10 , , , cord-347472-n6811ens 66 11 and and CC cord-347472-n6811ens 66 12 ignore ignore VB cord-347472-n6811ens 66 13 genomic genomic JJ cord-347472-n6811ens 66 14 DNA dna NN cord-347472-n6811ens 66 15 , , , cord-347472-n6811ens 66 16 by by IN cord-347472-n6811ens 66 17 generating generate VBG cord-347472-n6811ens 66 18 amplicons amplicon NNS cord-347472-n6811ens 66 19 that that WDT cord-347472-n6811ens 66 20 are be VBP cord-347472-n6811ens 66 21 of of IN cord-347472-n6811ens 66 22 PCR PCR NNP cord-347472-n6811ens 66 23 - - HYPH cord-347472-n6811ens 66 24 amplifiable amplifiable JJ cord-347472-n6811ens 66 25 size size NN cord-347472-n6811ens 66 26 only only RB cord-347472-n6811ens 66 27 after after IN cord-347472-n6811ens 66 28 splicing splicing NN cord-347472-n6811ens 66 29 or or CC cord-347472-n6811ens 66 30 by by IN cord-347472-n6811ens 66 31 targeting target VBG cord-347472-n6811ens 66 32 sequences sequence NNS cord-347472-n6811ens 66 33 created create VBN cord-347472-n6811ens 66 34 at at IN cord-347472-n6811ens 66 35 exon exon NN cord-347472-n6811ens 66 36 - - HYPH cord-347472-n6811ens 66 37 exon exon NN cord-347472-n6811ens 66 38 junctions junction NNS cord-347472-n6811ens 66 39 ( ( -LRB- cord-347472-n6811ens 66 40 Figs fig NNS cord-347472-n6811ens 66 41 . . . cord-347472-n6811ens 67 1 3 3 LS cord-347472-n6811ens 67 2 , , , cord-347472-n6811ens 67 3 S1 S1 NNP cord-347472-n6811ens 67 4 - - HYPH cord-347472-n6811ens 67 5 3 3 CD cord-347472-n6811ens 67 6 ) ) -RRB- cord-347472-n6811ens 67 7 . . . cord-347472-n6811ens 68 1 A a DT cord-347472-n6811ens 68 2 transcript transcript NN cord-347472-n6811ens 68 3 - - HYPH cord-347472-n6811ens 68 4 specific specific JJ cord-347472-n6811ens 68 5 control control NN cord-347472-n6811ens 68 6 design design NN cord-347472-n6811ens 68 7 incorporating incorporate VBG cord-347472-n6811ens 68 8 both both DT cord-347472-n6811ens 68 9 of of IN cord-347472-n6811ens 68 10 these these DT cord-347472-n6811ens 68 11 approaches approach NNS cord-347472-n6811ens 68 12 correctly correctly RB cord-347472-n6811ens 68 13 monitors monitor VBZ cord-347472-n6811ens 68 14 human human JJ cord-347472-n6811ens 68 15 specimen specimen NN cord-347472-n6811ens 68 16 collection collection NN cord-347472-n6811ens 68 17 , , , cord-347472-n6811ens 68 18 RNA RNA NNP cord-347472-n6811ens 68 19 integrity integrity NN cord-347472-n6811ens 68 20 , , , cord-347472-n6811ens 68 21 and and CC cord-347472-n6811ens 68 22 successful successful JJ cord-347472-n6811ens 68 23 reverse reverse NN cord-347472-n6811ens 68 24 transcription transcription NN cord-347472-n6811ens 68 25 , , , cord-347472-n6811ens 68 26 thus thus RB cord-347472-n6811ens 68 27 serving serve VBG cord-347472-n6811ens 68 28 all all DT cord-347472-n6811ens 68 29 intended intend VBN cord-347472-n6811ens 68 30 roles role NNS cord-347472-n6811ens 68 31 of of IN cord-347472-n6811ens 68 32 the the DT cord-347472-n6811ens 68 33 human human JJ cord-347472-n6811ens 68 34 specimen specimen NN cord-347472-n6811ens 68 35 / / SYM cord-347472-n6811ens 68 36 extraction extraction NN cord-347472-n6811ens 68 37 control control NN cord-347472-n6811ens 68 38 ( ( -LRB- cord-347472-n6811ens 68 39 Figs fig NNS cord-347472-n6811ens 68 40 . . . cord-347472-n6811ens 69 1 3 3 LS cord-347472-n6811ens 69 2 , , , cord-347472-n6811ens 69 3 S1 s1 NN cord-347472-n6811ens 69 4 , , , cord-347472-n6811ens 69 5 and and CC cord-347472-n6811ens 69 6 S2 S2 NNP cord-347472-n6811ens 69 7 and and CC cord-347472-n6811ens 69 8 Supplementary Supplementary NNP cord-347472-n6811ens 69 9 Text Text NNP cord-347472-n6811ens 69 10 ) ) -RRB- cord-347472-n6811ens 70 1 Discussion discussion NN cord-347472-n6811ens 70 2 : : : cord-347472-n6811ens 70 3 Properly properly RB cord-347472-n6811ens 70 4 - - HYPH cord-347472-n6811ens 70 5 designed design VBN cord-347472-n6811ens 70 6 extraction extraction NN cord-347472-n6811ens 70 7 and and CC cord-347472-n6811ens 70 8 reverse reverse VB cord-347472-n6811ens 70 9 transcription transcription NN cord-347472-n6811ens 70 10 controls control NNS cord-347472-n6811ens 70 11 are be VBP cord-347472-n6811ens 70 12 essential essential JJ cord-347472-n6811ens 70 13 , , , cord-347472-n6811ens 70 14 not not RB cord-347472-n6811ens 70 15 for for IN cord-347472-n6811ens 70 16 detecting detect VBG cord-347472-n6811ens 70 17 SARS SARS NNP cord-347472-n6811ens 70 18 - - HYPH cord-347472-n6811ens 70 19 CoV-2 CoV-2 NNP cord-347472-n6811ens 70 20 , , , cord-347472-n6811ens 70 21 but but CC cord-347472-n6811ens 70 22 for for IN cord-347472-n6811ens 70 23 determining determine VBG cord-347472-n6811ens 70 24 when when WRB cord-347472-n6811ens 70 25 a a DT cord-347472-n6811ens 70 26 negative negative JJ cord-347472-n6811ens 70 27 test test NN cord-347472-n6811ens 70 28 result result NN cord-347472-n6811ens 70 29 is be VBZ cord-347472-n6811ens 70 30 invalid invalid JJ cord-347472-n6811ens 70 31 . . . cord-347472-n6811ens 71 1 The the DT cord-347472-n6811ens 71 2 unprecedented unprecedented JJ cord-347472-n6811ens 71 3 scale scale NN cord-347472-n6811ens 71 4 of of IN cord-347472-n6811ens 71 5 molecular molecular JJ cord-347472-n6811ens 71 6 testing testing NN cord-347472-n6811ens 71 7 undertaken undertake VBN cord-347472-n6811ens 71 8 during during IN cord-347472-n6811ens 71 9 the the DT cord-347472-n6811ens 71 10 COVID-19 COVID-19 NNP cord-347472-n6811ens 71 11 pandemic pandemic NN cord-347472-n6811ens 71 12 has have VBZ cord-347472-n6811ens 71 13 required require VBN cord-347472-n6811ens 71 14 that that IN cord-347472-n6811ens 71 15 labs lab NNS cord-347472-n6811ens 71 16 rapidly rapidly RB cord-347472-n6811ens 71 17 adopt adopt VBP cord-347472-n6811ens 71 18 this this DT cord-347472-n6811ens 71 19 CDC CDC NNP cord-347472-n6811ens 71 20 - - HYPH cord-347472-n6811ens 71 21 specified specify VBN cord-347472-n6811ens 71 22 , , , cord-347472-n6811ens 71 23 among among IN cord-347472-n6811ens 71 24 many many JJ cord-347472-n6811ens 71 25 other other JJ cord-347472-n6811ens 71 26 , , , cord-347472-n6811ens 71 27 new new JJ cord-347472-n6811ens 71 28 assays assay NNS cord-347472-n6811ens 71 29 . . . cord-347472-n6811ens 72 1 Labs lab NNS cord-347472-n6811ens 72 2 accustomed accustom VBD cord-347472-n6811ens 72 3 to to IN cord-347472-n6811ens 72 4 automated automated JJ cord-347472-n6811ens 72 5 walk walk NN cord-347472-n6811ens 72 6 - - HYPH cord-347472-n6811ens 72 7 up up RP cord-347472-n6811ens 72 8 systems system NNS cord-347472-n6811ens 72 9 are be VBP cord-347472-n6811ens 72 10 now now RB cord-347472-n6811ens 72 11 performing perform VBG cord-347472-n6811ens 72 12 manual manual JJ cord-347472-n6811ens 72 13 sample sample NN cord-347472-n6811ens 72 14 handling handling NN cord-347472-n6811ens 72 15 and and CC cord-347472-n6811ens 72 16 reaction reaction NN cord-347472-n6811ens 72 17 setup setup NN cord-347472-n6811ens 72 18 one one CD cord-347472-n6811ens 72 19 pipet pipet NN cord-347472-n6811ens 72 20 tip tip NN cord-347472-n6811ens 72 21 at at IN cord-347472-n6811ens 72 22 a a DT cord-347472-n6811ens 72 23 time time NN cord-347472-n6811ens 72 24 . . . cord-347472-n6811ens 73 1 The the DT cord-347472-n6811ens 73 2 CDC CDC NNP cord-347472-n6811ens 73 3 design design NN cord-347472-n6811ens 73 4 detects detect VBZ cord-347472-n6811ens 73 5 SARS SARS NNP cord-347472-n6811ens 73 6 - - HYPH cord-347472-n6811ens 73 7 CoV-2 CoV-2 NNP cord-347472-n6811ens 73 8 , , , cord-347472-n6811ens 73 9 but but CC cord-347472-n6811ens 73 10 in in IN cord-347472-n6811ens 73 11 the the DT cord-347472-n6811ens 73 12 face face NN cord-347472-n6811ens 73 13 of of IN cord-347472-n6811ens 73 14 real real JJ cord-347472-n6811ens 73 15 - - HYPH cord-347472-n6811ens 73 16 world world NN cord-347472-n6811ens 73 17 assay assay NN cord-347472-n6811ens 73 18 errors error NNS cord-347472-n6811ens 73 19 , , , cord-347472-n6811ens 73 20 its -PRON- PRP$ cord-347472-n6811ens 73 21 faulty faulty JJ cord-347472-n6811ens 73 22 control control NN cord-347472-n6811ens 73 23 design design NN cord-347472-n6811ens 73 24 fails fail VBZ cord-347472-n6811ens 73 25 - - HYPH cord-347472-n6811ens 73 26 unsafe unsafe JJ cord-347472-n6811ens 73 27 and and CC cord-347472-n6811ens 73 28 calls call VBZ cord-347472-n6811ens 73 29 into into IN cord-347472-n6811ens 73 30 question question NN cord-347472-n6811ens 73 31 virus virus NN cord-347472-n6811ens 73 32 - - HYPH cord-347472-n6811ens 73 33 negative negative JJ cord-347472-n6811ens 73 34 results result NNS cord-347472-n6811ens 73 35 . . . cord-347472-n6811ens 74 1 The the DT cord-347472-n6811ens 74 2 CDC CDC NNP cord-347472-n6811ens 74 3 specifies specify VBZ cord-347472-n6811ens 74 4 a a DT cord-347472-n6811ens 74 5 once once RB cord-347472-n6811ens 74 6 - - HYPH cord-347472-n6811ens 74 7 per per IN cord-347472-n6811ens 74 8 - - HYPH cord-347472-n6811ens 74 9 plate plate NN cord-347472-n6811ens 74 10 control control NN cord-347472-n6811ens 74 11 using use VBG cord-347472-n6811ens 74 12 in in IN cord-347472-n6811ens 74 13 vitro vitro FW cord-347472-n6811ens 74 14 transcribed transcribe VBN cord-347472-n6811ens 74 15 RNA RNA NNP cord-347472-n6811ens 74 16 , , , cord-347472-n6811ens 74 17 purified purify VBN cord-347472-n6811ens 74 18 virus virus NN cord-347472-n6811ens 74 19 , , , cord-347472-n6811ens 74 20 or or CC cord-347472-n6811ens 74 21 pooled pool VBN cord-347472-n6811ens 74 22 patient patient NN cord-347472-n6811ens 74 23 samples sample NNS cord-347472-n6811ens 74 24 . . . cord-347472-n6811ens 75 1 This this DT cord-347472-n6811ens 75 2 approach approach NN cord-347472-n6811ens 75 3 does do VBZ cord-347472-n6811ens 75 4 not not RB cord-347472-n6811ens 75 5 inform inform VB cord-347472-n6811ens 75 6 about about IN cord-347472-n6811ens 75 7 the the DT cord-347472-n6811ens 75 8 suitability suitability NN cord-347472-n6811ens 75 9 of of IN cord-347472-n6811ens 75 10 individual individual JJ cord-347472-n6811ens 75 11 specimens specimen NNS cord-347472-n6811ens 75 12 . . . cord-347472-n6811ens 76 1 Degradation degradation NN cord-347472-n6811ens 76 2 of of IN cord-347472-n6811ens 76 3 sample sample NN cord-347472-n6811ens 76 4 RNAs rna NNS cord-347472-n6811ens 76 5 or or CC cord-347472-n6811ens 76 6 failure failure NN cord-347472-n6811ens 76 7 of of IN cord-347472-n6811ens 76 8 reverse reverse JJ cord-347472-n6811ens 76 9 transcription transcription NN cord-347472-n6811ens 76 10 on on IN cord-347472-n6811ens 76 11 a a DT cord-347472-n6811ens 76 12 per per IN cord-347472-n6811ens 76 13 - - HYPH cord-347472-n6811ens 76 14 sample sample NN cord-347472-n6811ens 76 15 basis basis NN cord-347472-n6811ens 76 16 results result NNS cord-347472-n6811ens 76 17 in in IN cord-347472-n6811ens 76 18 the the DT cord-347472-n6811ens 76 19 inability inability NN cord-347472-n6811ens 76 20 to to TO cord-347472-n6811ens 76 21 detect detect VB cord-347472-n6811ens 76 22 viral viral JJ cord-347472-n6811ens 76 23 RNAs rna NNS cord-347472-n6811ens 76 24 while while IN cord-347472-n6811ens 76 25 the the DT cord-347472-n6811ens 76 26 DNA dna NN cord-347472-n6811ens 76 27 - - HYPH cord-347472-n6811ens 76 28 templated templated JJ cord-347472-n6811ens 76 29 control control NN cord-347472-n6811ens 76 30 signal signal NN cord-347472-n6811ens 76 31 remains remain VBZ cord-347472-n6811ens 76 32 . . . cord-347472-n6811ens 77 1 This this DT cord-347472-n6811ens 77 2 opens open VBZ cord-347472-n6811ens 77 3 the the DT cord-347472-n6811ens 77 4 door door NN cord-347472-n6811ens 77 5 to to IN cord-347472-n6811ens 77 6 false false JJ cord-347472-n6811ens 77 7 - - HYPH cord-347472-n6811ens 77 8 negative negative JJ cord-347472-n6811ens 77 9 clinical clinical JJ cord-347472-n6811ens 77 10 interpretation interpretation NN cord-347472-n6811ens 77 11 of of IN cord-347472-n6811ens 77 12 patients patient NNS cord-347472-n6811ens 77 13 from from IN cord-347472-n6811ens 77 14 whom whom WP cord-347472-n6811ens 77 15 virus virus NN cord-347472-n6811ens 77 16 was be VBD cord-347472-n6811ens 77 17 successfully successfully RB cord-347472-n6811ens 77 18 collected collect VBN cord-347472-n6811ens 77 19 . . . cord-347472-n6811ens 78 1 Controls control NNS cord-347472-n6811ens 78 2 for for IN cord-347472-n6811ens 78 3 specimen specimen JJ cord-347472-n6811ens 78 4 integrity integrity NN cord-347472-n6811ens 78 5 and and CC cord-347472-n6811ens 78 6 success success NN cord-347472-n6811ens 78 7 of of IN cord-347472-n6811ens 78 8 all all DT cord-347472-n6811ens 78 9 reaction reaction NN cord-347472-n6811ens 78 10 steps step NNS cord-347472-n6811ens 78 11 are be VBP cord-347472-n6811ens 78 12 critical critical JJ cord-347472-n6811ens 78 13 to to IN cord-347472-n6811ens 78 14 robust robust JJ cord-347472-n6811ens 78 15 assay assay NN cord-347472-n6811ens 78 16 design design NN cord-347472-n6811ens 78 17 . . . cord-347472-n6811ens 79 1 The the DT cord-347472-n6811ens 79 2 currently currently RB cord-347472-n6811ens 79 3 - - HYPH cord-347472-n6811ens 79 4 specified specify VBN cord-347472-n6811ens 79 5 CDC CDC NNP cord-347472-n6811ens 79 6 control control NN cord-347472-n6811ens 79 7 achieves achieve VBZ cord-347472-n6811ens 79 8 neither neither RB cord-347472-n6811ens 79 9 . . . cord-347472-n6811ens 80 1 A a DT cord-347472-n6811ens 80 2 number number NN cord-347472-n6811ens 80 3 of of IN cord-347472-n6811ens 80 4 other other JJ cord-347472-n6811ens 80 5 FDAapproved FDAapproved NNP cord-347472-n6811ens 80 6 SARS SARS NNP cord-347472-n6811ens 80 7 - - HYPH cord-347472-n6811ens 80 8 CoV-2 CoV-2 NNP cord-347472-n6811ens 80 9 molecular molecular JJ cord-347472-n6811ens 80 10 assays assay NNS cord-347472-n6811ens 80 11 use use VBP cord-347472-n6811ens 80 12 synthetic synthetic JJ cord-347472-n6811ens 80 13 RNA RNA NNP cord-347472-n6811ens 80 14 spike spike NN cord-347472-n6811ens 80 15 - - HYPH cord-347472-n6811ens 80 16 ins in NNS cord-347472-n6811ens 80 17 added add VBD cord-347472-n6811ens 80 18 at at IN cord-347472-n6811ens 80 19 the the DT cord-347472-n6811ens 80 20 time time NN cord-347472-n6811ens 80 21 of of IN cord-347472-n6811ens 80 22 extraction extraction NN cord-347472-n6811ens 80 23 . . . cord-347472-n6811ens 81 1 This this DT cord-347472-n6811ens 81 2 approach approach NN cord-347472-n6811ens 81 3 controls control VBZ cord-347472-n6811ens 81 4 for for IN cord-347472-n6811ens 81 5 post post JJ cord-347472-n6811ens 81 6 - - JJ cord-347472-n6811ens 81 7 extraction extraction JJ cord-347472-n6811ens 81 8 sample sample NN cord-347472-n6811ens 81 9 integrity integrity NN cord-347472-n6811ens 81 10 and and CC cord-347472-n6811ens 81 11 reverse reverse VB cord-347472-n6811ens 81 12 transcription transcription NN cord-347472-n6811ens 81 13 , , , cord-347472-n6811ens 81 14 but but CC cord-347472-n6811ens 81 15 does do VBZ cord-347472-n6811ens 81 16 not not RB cord-347472-n6811ens 81 17 inform inform VB cord-347472-n6811ens 81 18 about about IN cord-347472-n6811ens 81 19 sufficiency sufficiency NN cord-347472-n6811ens 81 20 of of IN cord-347472-n6811ens 81 21 collected collect VBN cord-347472-n6811ens 81 22 patient patient NN cord-347472-n6811ens 81 23 samples sample NNS cord-347472-n6811ens 81 24 ( ( -LRB- cord-347472-n6811ens 81 25 9 9 CD cord-347472-n6811ens 81 26 ) ) -RRB- cord-347472-n6811ens 81 27 . . . cord-347472-n6811ens 82 1 The the DT cord-347472-n6811ens 82 2 intent intent NN cord-347472-n6811ens 82 3 of of IN cord-347472-n6811ens 82 4 the the DT cord-347472-n6811ens 82 5 CDC CDC NNP cord-347472-n6811ens 82 6 's 's POS cord-347472-n6811ens 82 7 extraction extraction NN cord-347472-n6811ens 82 8 control control NN cord-347472-n6811ens 82 9 is be VBZ cord-347472-n6811ens 82 10 good good JJ cord-347472-n6811ens 82 11 , , , cord-347472-n6811ens 82 12 monitoring monitoring NN cord-347472-n6811ens 82 13 ( ( -LRB- cord-347472-n6811ens 82 14 1 1 CD cord-347472-n6811ens 82 15 ) ) -RRB- cord-347472-n6811ens 82 16 sufficient sufficient JJ cord-347472-n6811ens 82 17 human human JJ cord-347472-n6811ens 82 18 specimen specimen NN cord-347472-n6811ens 82 19 collection collection NN cord-347472-n6811ens 82 20 , , , cord-347472-n6811ens 82 21 ( ( -LRB- cord-347472-n6811ens 82 22 2 2 LS cord-347472-n6811ens 82 23 ) ) -RRB- cord-347472-n6811ens 82 24 maintenance maintenance NN cord-347472-n6811ens 82 25 of of IN cord-347472-n6811ens 82 26 sample sample NN cord-347472-n6811ens 82 27 integrity integrity NN cord-347472-n6811ens 82 28 during during IN cord-347472-n6811ens 82 29 processing processing NN cord-347472-n6811ens 82 30 , , , cord-347472-n6811ens 82 31 and and CC cord-347472-n6811ens 82 32 ( ( -LRB- cord-347472-n6811ens 82 33 3 3 LS cord-347472-n6811ens 82 34 ) ) -RRB- cord-347472-n6811ens 82 35 successful successful JJ cord-347472-n6811ens 82 36 reverse reverse NN cord-347472-n6811ens 82 37 transcription transcription NN cord-347472-n6811ens 82 38 and and CC cord-347472-n6811ens 82 39 qPCR qpcr NN cord-347472-n6811ens 82 40 . . . cord-347472-n6811ens 83 1 These these DT cord-347472-n6811ens 83 2 goals goal NNS cord-347472-n6811ens 83 3 can can MD cord-347472-n6811ens 83 4 be be VB cord-347472-n6811ens 83 5 met meet VBN cord-347472-n6811ens 83 6 by by IN cord-347472-n6811ens 83 7 an an DT cord-347472-n6811ens 83 8 extraction extraction NN cord-347472-n6811ens 83 9 control control NN cord-347472-n6811ens 83 10 that that WDT cord-347472-n6811ens 83 11 specifically specifically RB cord-347472-n6811ens 83 12 detects detect VBZ cord-347472-n6811ens 83 13 human human JJ cord-347472-n6811ens 83 14 RNA RNA NNP cord-347472-n6811ens 83 15 and and CC cord-347472-n6811ens 83 16 is be VBZ cord-347472-n6811ens 83 17 insensitive insensitive JJ cord-347472-n6811ens 83 18 to to TO cord-347472-n6811ens 83 19 genomic genomic JJ cord-347472-n6811ens 83 20 DNA dna NN cord-347472-n6811ens 83 21 ; ; : cord-347472-n6811ens 83 22 the the DT cord-347472-n6811ens 83 23 CDC CDC NNP cord-347472-n6811ens 83 24 's 's POS cord-347472-n6811ens 83 25 mis mis NN cord-347472-n6811ens 83 26 - - HYPH cord-347472-n6811ens 83 27 executed execute VBN cord-347472-n6811ens 83 28 plan plan NN cord-347472-n6811ens 83 29 can can MD cord-347472-n6811ens 83 30 be be VB cord-347472-n6811ens 83 31 put put VBN cord-347472-n6811ens 83 32 into into IN cord-347472-n6811ens 83 33 practice practice NN cord-347472-n6811ens 83 34 by by IN cord-347472-n6811ens 83 35 manufacturing manufacture VBG cord-347472-n6811ens 83 36 and and CC cord-347472-n6811ens 83 37 shipping ship VBG cord-347472-n6811ens 83 38 an an DT cord-347472-n6811ens 83 39 updated update VBN cord-347472-n6811ens 83 40 control control NN cord-347472-n6811ens 83 41 . . . cord-347472-n6811ens 84 1 The the DT cord-347472-n6811ens 84 2 DNA dna NN cord-347472-n6811ens 84 3 cross cross JJ cord-347472-n6811ens 84 4 - - JJ cord-347472-n6811ens 84 5 reactive reactive JJ cord-347472-n6811ens 84 6 control control NN cord-347472-n6811ens 84 7 probe probe NN cord-347472-n6811ens 84 8 is be VBZ cord-347472-n6811ens 84 9 used use VBN cord-347472-n6811ens 84 10 in in IN cord-347472-n6811ens 84 11 over over IN cord-347472-n6811ens 84 12 40 40 CD cord-347472-n6811ens 84 13 % % NN cord-347472-n6811ens 84 14 of of IN cord-347472-n6811ens 84 15 the the DT cord-347472-n6811ens 84 16 COVID-19 COVID-19 NNP cord-347472-n6811ens 84 17 FDA FDA NNP cord-347472-n6811ens 84 18 - - HYPH cord-347472-n6811ens 84 19 authorized authorize VBN cord-347472-n6811ens 84 20 protocols protocol NNS cord-347472-n6811ens 84 21 listed list VBN cord-347472-n6811ens 84 22 as as IN cord-347472-n6811ens 84 23 of of IN cord-347472-n6811ens 84 24 May May NNP cord-347472-n6811ens 84 25 13 13 CD cord-347472-n6811ens 84 26 , , , cord-347472-n6811ens 84 27 2020 2020 CD cord-347472-n6811ens 84 28 ( ( -LRB- cord-347472-n6811ens 84 29 10 10 CD cord-347472-n6811ens 84 30 ) ) -RRB- cord-347472-n6811ens 84 31 . . . cord-347472-n6811ens 85 1 31 31 CD cord-347472-n6811ens 85 2 million million CD cord-347472-n6811ens 85 3 assays assay NNS cord-347472-n6811ens 85 4 worth worth JJ cord-347472-n6811ens 85 5 of of IN cord-347472-n6811ens 85 6 CDC CDC NNP cord-347472-n6811ens 85 7 - - HYPH cord-347472-n6811ens 85 8 design design NN cord-347472-n6811ens 85 9 reagents reagent NNS cord-347472-n6811ens 85 10 have have VBP cord-347472-n6811ens 85 11 been be VBN cord-347472-n6811ens 85 12 produced produce VBN cord-347472-n6811ens 85 13 and and CC cord-347472-n6811ens 85 14 shipped ship VBN cord-347472-n6811ens 85 15 by by IN cord-347472-n6811ens 85 16 a a DT cord-347472-n6811ens 85 17 single single JJ cord-347472-n6811ens 85 18 vendor vendor NN cord-347472-n6811ens 85 19 as as IN cord-347472-n6811ens 85 20 of of IN cord-347472-n6811ens 85 21 April April NNP cord-347472-n6811ens 85 22 22 22 CD cord-347472-n6811ens 85 23 , , , cord-347472-n6811ens 85 24 2020 2020 CD cord-347472-n6811ens 85 25 ( ( -LRB- cord-347472-n6811ens 85 26 11 11 CD cord-347472-n6811ens 85 27 ) ) -RRB- cord-347472-n6811ens 85 28 . . . cord-347472-n6811ens 86 1 This this DT cord-347472-n6811ens 86 2 CDC CDC NNP cord-347472-n6811ens 86 3 - - HYPH cord-347472-n6811ens 86 4 designed design VBN cord-347472-n6811ens 86 5 SARS SARS NNP cord-347472-n6811ens 86 6 - - HYPH cord-347472-n6811ens 86 7 CoV-2 CoV-2 NNP cord-347472-n6811ens 86 8 assay assay NN cord-347472-n6811ens 86 9 is be VBZ cord-347472-n6811ens 86 10 FDA FDA NNP cord-347472-n6811ens 86 11 - - HYPH cord-347472-n6811ens 86 12 approved approve VBN cord-347472-n6811ens 86 13 and and CC cord-347472-n6811ens 86 14 unquestionably unquestionably RB cord-347472-n6811ens 86 15 popular popular JJ cord-347472-n6811ens 86 16 , , , cord-347472-n6811ens 86 17 but but CC cord-347472-n6811ens 86 18 we -PRON- PRP cord-347472-n6811ens 86 19 must must MD cord-347472-n6811ens 86 20 not not RB cord-347472-n6811ens 86 21 confuse confuse VB cord-347472-n6811ens 86 22 popularity popularity NN cord-347472-n6811ens 86 23 and and CC cord-347472-n6811ens 86 24 official official JJ cord-347472-n6811ens 86 25 approval approval NN cord-347472-n6811ens 86 26 with with IN cord-347472-n6811ens 86 27 being be VBG cord-347472-n6811ens 86 28 correct correct JJ cord-347472-n6811ens 86 29 . . . cord-347472-n6811ens 87 1 The the DT cord-347472-n6811ens 87 2 scope scope NN cord-347472-n6811ens 87 3 of of IN cord-347472-n6811ens 87 4 this this DT cord-347472-n6811ens 87 5 problem problem NN cord-347472-n6811ens 87 6 is be VBZ cord-347472-n6811ens 87 7 large large JJ cord-347472-n6811ens 87 8 , , , cord-347472-n6811ens 87 9 though though IN cord-347472-n6811ens 87 10 its -PRON- PRP$ cord-347472-n6811ens 87 11 extent extent NN cord-347472-n6811ens 87 12 is be VBZ cord-347472-n6811ens 87 13 unknowable unknowable JJ cord-347472-n6811ens 87 14 : : : cord-347472-n6811ens 87 15 the the DT cord-347472-n6811ens 87 16 sequences sequence NNS cord-347472-n6811ens 87 17 used use VBN cord-347472-n6811ens 87 18 in in IN cord-347472-n6811ens 87 19 many many JJ cord-347472-n6811ens 87 20 test test NN cord-347472-n6811ens 87 21 designs design NNS cord-347472-n6811ens 87 22 , , , cord-347472-n6811ens 87 23 commercial commercial JJ cord-347472-n6811ens 87 24 and and CC cord-347472-n6811ens 87 25 academic academic JJ cord-347472-n6811ens 87 26 , , , cord-347472-n6811ens 87 27 are be VBP cord-347472-n6811ens 87 28 not not RB cord-347472-n6811ens 87 29 disclosed disclose VBN cord-347472-n6811ens 87 30 to to IN cord-347472-n6811ens 87 31 the the DT cord-347472-n6811ens 87 32 public public NN cord-347472-n6811ens 87 33 . . . cord-347472-n6811ens 88 1 Even even RB cord-347472-n6811ens 88 2 fully fully RB cord-347472-n6811ens 88 3 disclosed disclose VBN cord-347472-n6811ens 88 4 sequences sequence NNS cord-347472-n6811ens 88 5 do do VBP cord-347472-n6811ens 88 6 not not RB cord-347472-n6811ens 88 7 guarantee guarantee VB cord-347472-n6811ens 88 8 rapid rapid JJ cord-347472-n6811ens 88 9 discovery discovery NN cord-347472-n6811ens 88 10 of of IN cord-347472-n6811ens 88 11 errors error NNS cord-347472-n6811ens 88 12 . . . cord-347472-n6811ens 89 1 This this DT cord-347472-n6811ens 89 2 poorly poorly RB cord-347472-n6811ens 89 3 - - HYPH cord-347472-n6811ens 89 4 designed design VBN cord-347472-n6811ens 89 5 CDC CDC NNP cord-347472-n6811ens 89 6 extraction extraction NN cord-347472-n6811ens 89 7 control control NN cord-347472-n6811ens 89 8 probe probe NN cord-347472-n6811ens 89 9 has have VBZ cord-347472-n6811ens 89 10 been be VBN cord-347472-n6811ens 89 11 included include VBN cord-347472-n6811ens 89 12 in in IN cord-347472-n6811ens 89 13 clinical clinical JJ cord-347472-n6811ens 89 14 RT rt NN cord-347472-n6811ens 89 15 - - HYPH cord-347472-n6811ens 89 16 qPCR qpcr NN cord-347472-n6811ens 89 17 panels panel NNS cord-347472-n6811ens 89 18 used use VBN cord-347472-n6811ens 89 19 in in IN cord-347472-n6811ens 89 20 testing testing NN cord-347472-n6811ens 89 21 for for IN cord-347472-n6811ens 89 22 RNA RNA NNP cord-347472-n6811ens 89 23 viruses virus NNS cord-347472-n6811ens 89 24 across across IN cord-347472-n6811ens 89 25 more more JJR cord-347472-n6811ens 89 26 than than IN cord-347472-n6811ens 89 27 a a DT cord-347472-n6811ens 89 28 decade decade NN cord-347472-n6811ens 89 29 ( ( -LRB- cord-347472-n6811ens 89 30 12 12 CD cord-347472-n6811ens 89 31 ) ) -RRB- cord-347472-n6811ens 89 32 . . . cord-347472-n6811ens 90 1 Past past NN cord-347472-n6811ens 90 2 errors error NNS cord-347472-n6811ens 90 3 can can MD cord-347472-n6811ens 90 4 not not RB cord-347472-n6811ens 90 5 be be VB cord-347472-n6811ens 90 6 unmade unmade JJ cord-347472-n6811ens 90 7 , , , cord-347472-n6811ens 90 8 but but CC cord-347472-n6811ens 90 9 future future JJ cord-347472-n6811ens 90 10 false false JJ cord-347472-n6811ens 90 11 negatives negative NNS cord-347472-n6811ens 90 12 that that WDT cord-347472-n6811ens 90 13 would would MD cord-347472-n6811ens 90 14 arise arise VB cord-347472-n6811ens 90 15 from from IN cord-347472-n6811ens 90 16 this this DT cord-347472-n6811ens 90 17 design design NN cord-347472-n6811ens 90 18 can can MD cord-347472-n6811ens 90 19 be be VB cord-347472-n6811ens 90 20 prevented prevent VBN cord-347472-n6811ens 90 21 . . . cord-347472-n6811ens 91 1 The the DT cord-347472-n6811ens 91 2 current current JJ cord-347472-n6811ens 91 3 CDC CDC NNP cord-347472-n6811ens 91 4 algorithm algorithm NN cord-347472-n6811ens 91 5 states state VBZ cord-347472-n6811ens 91 6 that that IN cord-347472-n6811ens 91 7 molecular molecular JJ cord-347472-n6811ens 91 8 testing testing NN cord-347472-n6811ens 91 9 " " '' cord-347472-n6811ens 91 10 … … NFP cord-347472-n6811ens 91 11 must must MD cord-347472-n6811ens 91 12 be be VB cord-347472-n6811ens 91 13 combined combine VBN cord-347472-n6811ens 91 14 with with IN cord-347472-n6811ens 91 15 clinical clinical JJ cord-347472-n6811ens 91 16 observations observation NNS cord-347472-n6811ens 91 17 , , , cord-347472-n6811ens 91 18 patient patient JJ cord-347472-n6811ens 91 19 history history NN cord-347472-n6811ens 91 20 , , , cord-347472-n6811ens 91 21 and and CC cord-347472-n6811ens 91 22 epidemiological epidemiological JJ cord-347472-n6811ens 91 23 information information NN cord-347472-n6811ens 91 24 " " '' cord-347472-n6811ens 91 25 ( ( -LRB- cord-347472-n6811ens 91 26 2 2 CD cord-347472-n6811ens 91 27 ) ) -RRB- cord-347472-n6811ens 91 28 . . . cord-347472-n6811ens 92 1 In in IN cord-347472-n6811ens 92 2 the the DT cord-347472-n6811ens 92 3 context context NN cord-347472-n6811ens 92 4 of of IN cord-347472-n6811ens 92 5 drive drive NN cord-347472-n6811ens 92 6 - - HYPH cord-347472-n6811ens 92 7 up up NN cord-347472-n6811ens 92 8 testing testing NN cord-347472-n6811ens 92 9 and and CC cord-347472-n6811ens 92 10 potential potential JJ cord-347472-n6811ens 92 11 nationwide nationwide JJ cord-347472-n6811ens 92 12 return return NN cord-347472-n6811ens 92 13 - - HYPH cord-347472-n6811ens 92 14 to to IN cord-347472-n6811ens 92 15 - - HYPH cord-347472-n6811ens 92 16 work work NN cord-347472-n6811ens 92 17 testing testing NN cord-347472-n6811ens 92 18 , , , cord-347472-n6811ens 92 19 clinical clinical JJ cord-347472-n6811ens 92 20 observations observation NNS cord-347472-n6811ens 92 21 will will MD cord-347472-n6811ens 92 22 be be VB cord-347472-n6811ens 92 23 necessarily necessarily RB cord-347472-n6811ens 92 24 limited limit VBN cord-347472-n6811ens 92 25 and and CC cord-347472-n6811ens 92 26 often often RB cord-347472-n6811ens 92 27 impersonal impersonal JJ cord-347472-n6811ens 92 28 in in IN cord-347472-n6811ens 92 29 scope scope NN cord-347472-n6811ens 92 30 . . . cord-347472-n6811ens 93 1 Absence absence NN cord-347472-n6811ens 93 2 of of IN cord-347472-n6811ens 93 3 data datum NNS cord-347472-n6811ens 93 4 and and CC cord-347472-n6811ens 93 5 data datum NNS cord-347472-n6811ens 93 6 of of IN cord-347472-n6811ens 93 7 absence absence NN cord-347472-n6811ens 93 8 must must MD cord-347472-n6811ens 93 9 be be VB cord-347472-n6811ens 93 10 carefully carefully RB cord-347472-n6811ens 93 11 distinguished distinguish VBN cord-347472-n6811ens 93 12 . . . cord-347472-n6811ens 94 1 A a DT cord-347472-n6811ens 94 2 proper proper JJ cord-347472-n6811ens 94 3 control control NN cord-347472-n6811ens 94 4 does do VBZ cord-347472-n6811ens 94 5 not not RB cord-347472-n6811ens 94 6 provide provide VB cord-347472-n6811ens 94 7 definitive definitive JJ cord-347472-n6811ens 94 8 diagnostic diagnostic JJ cord-347472-n6811ens 94 9 results result NNS cord-347472-n6811ens 94 10 from from IN cord-347472-n6811ens 94 11 a a DT cord-347472-n6811ens 94 12 flawed flawed JJ cord-347472-n6811ens 94 13 specimen specimen NN cord-347472-n6811ens 94 14 . . . cord-347472-n6811ens 95 1 It -PRON- PRP cord-347472-n6811ens 95 2 will will MD cord-347472-n6811ens 95 3 , , , cord-347472-n6811ens 95 4 however however RB cord-347472-n6811ens 95 5 , , , cord-347472-n6811ens 95 6 fail fail VB cord-347472-n6811ens 95 7 - - HYPH cord-347472-n6811ens 95 8 safe safe JJ cord-347472-n6811ens 95 9 , , , cord-347472-n6811ens 95 10 flag flag VB cord-347472-n6811ens 95 11 a a DT cord-347472-n6811ens 95 12 result result NN cord-347472-n6811ens 95 13 as as IN cord-347472-n6811ens 95 14 invalid invalid JJ cord-347472-n6811ens 95 15 , , , cord-347472-n6811ens 95 16 and and CC cord-347472-n6811ens 95 17 call call VB cord-347472-n6811ens 95 18 attention attention NN cord-347472-n6811ens 95 19 to to IN cord-347472-n6811ens 95 20 problem problem NN cord-347472-n6811ens 95 21 samples sample NNS cord-347472-n6811ens 95 22 to to TO cord-347472-n6811ens 95 23 enable enable VB cord-347472-n6811ens 95 24 focused focus VBN cord-347472-n6811ens 95 25 re re NN cord-347472-n6811ens 95 26 - - NN cord-347472-n6811ens 95 27 testing testing NN cord-347472-n6811ens 95 28 or or CC cord-347472-n6811ens 95 29 changes change NNS cord-347472-n6811ens 95 30 in in IN cord-347472-n6811ens 95 31 clinical clinical JJ cord-347472-n6811ens 95 32 management management NN cord-347472-n6811ens 95 33 . . . cord-347472-n6811ens 96 1 In in IN cord-347472-n6811ens 96 2 the the DT cord-347472-n6811ens 96 3 interest interest NN cord-347472-n6811ens 96 4 of of IN cord-347472-n6811ens 96 5 public public JJ cord-347472-n6811ens 96 6 health health NN cord-347472-n6811ens 96 7 , , , cord-347472-n6811ens 96 8 assays assay NNS cord-347472-n6811ens 96 9 must must MD cord-347472-n6811ens 96 10 generate generate VB cord-347472-n6811ens 96 11 as as IN cord-347472-n6811ens 96 12 many many JJ cord-347472-n6811ens 96 13 valid valid JJ cord-347472-n6811ens 96 14 results result NNS cord-347472-n6811ens 96 15 as as RB cord-347472-n6811ens 96 16 feasible feasible JJ cord-347472-n6811ens 96 17 . . . cord-347472-n6811ens 97 1 This this DT cord-347472-n6811ens 97 2 requires require VBZ cord-347472-n6811ens 97 3 simultaneously simultaneously RB cord-347472-n6811ens 97 4 maximizing maximize VBG cord-347472-n6811ens 97 5 identification identification NN cord-347472-n6811ens 97 6 of of IN cord-347472-n6811ens 97 7 true true JJ cord-347472-n6811ens 97 8 positives positive NNS cord-347472-n6811ens 97 9 and and CC cord-347472-n6811ens 97 10 minimizing minimize VBG cord-347472-n6811ens 97 11 false false JJ cord-347472-n6811ens 97 12 negatives negative NNS cord-347472-n6811ens 97 13 . . . cord-347472-n6811ens 98 1 Virus virus NN cord-347472-n6811ens 98 2 - - HYPH cord-347472-n6811ens 98 3 shedding shed VBG cord-347472-n6811ens 98 4 patients patient NNS cord-347472-n6811ens 98 5 must must MD cord-347472-n6811ens 98 6 not not RB cord-347472-n6811ens 98 7 be be VB cord-347472-n6811ens 98 8 given give VBN cord-347472-n6811ens 98 9 an an DT cord-347472-n6811ens 98 10 all all RB cord-347472-n6811ens 98 11 - - HYPH cord-347472-n6811ens 98 12 clear clear JJ cord-347472-n6811ens 98 13 test test NN cord-347472-n6811ens 98 14 result result NN cord-347472-n6811ens 98 15 due due IN cord-347472-n6811ens 98 16 to to IN cord-347472-n6811ens 98 17 an an DT cord-347472-n6811ens 98 18 improperly improperly RB cord-347472-n6811ens 98 19 designed design VBN cord-347472-n6811ens 98 20 that that WDT cord-347472-n6811ens 98 21 can can MD cord-347472-n6811ens 98 22 be be VB cord-347472-n6811ens 98 23 readily readily RB cord-347472-n6811ens 98 24 fixed fix VBN cord-347472-n6811ens 98 25 . . . cord-347472-n6811ens 99 1 While while IN cord-347472-n6811ens 99 2 perfect perfect JJ cord-347472-n6811ens 99 3 diagnostic diagnostic JJ cord-347472-n6811ens 99 4 tests test NNS cord-347472-n6811ens 99 5 are be VBP cord-347472-n6811ens 99 6 unachievable unachievable JJ cord-347472-n6811ens 99 7 , , , cord-347472-n6811ens 99 8 assays assay NNS cord-347472-n6811ens 99 9 should should MD cord-347472-n6811ens 99 10 be be VB cord-347472-n6811ens 99 11 designed design VBN cord-347472-n6811ens 99 12 and and CC cord-347472-n6811ens 99 13 updated update VBN cord-347472-n6811ens 99 14 to to TO cord-347472-n6811ens 99 15 strive strive VB cord-347472-n6811ens 99 16 for for IN cord-347472-n6811ens 99 17 maximum maximum JJ cord-347472-n6811ens 99 18 specificity specificity NN cord-347472-n6811ens 99 19 . . . cord-347472-n6811ens 100 1 The the DT cord-347472-n6811ens 100 2 cost cost NN cord-347472-n6811ens 100 3 of of IN cord-347472-n6811ens 100 4 incorrectly incorrectly RB cord-347472-n6811ens 100 5 clearing clear VBG cord-347472-n6811ens 100 6 SARS SARS NNP cord-347472-n6811ens 100 7 - - HYPH cord-347472-n6811ens 100 8 CoV-2-positive cov-2-positive JJ cord-347472-n6811ens 100 9 patients patient NNS cord-347472-n6811ens 100 10 is be VBZ cord-347472-n6811ens 100 11 incalculably incalculably RB cord-347472-n6811ens 100 12 large large JJ cord-347472-n6811ens 100 13 . . . cord-347472-n6811ens 101 1 Implementing implement VBG cord-347472-n6811ens 101 2 a a DT cord-347472-n6811ens 101 3 redesigned redesign VBN cord-347472-n6811ens 101 4 control control NN cord-347472-n6811ens 101 5 that that WDT cord-347472-n6811ens 101 6 performs perform VBZ cord-347472-n6811ens 101 7 as as IN cord-347472-n6811ens 101 8 intended intend VBN cord-347472-n6811ens 101 9 amounts amount NNS cord-347472-n6811ens 101 10 to to IN cord-347472-n6811ens 101 11 pennies penny NNS cord-347472-n6811ens 101 12 per per IN cord-347472-n6811ens 101 13 test test NN cord-347472-n6811ens 101 14 . . . cord-347472-n6811ens 102 1 A a DT cord-347472-n6811ens 102 2 new new JJ cord-347472-n6811ens 102 3 primer primer NN cord-347472-n6811ens 102 4 / / SYM cord-347472-n6811ens 102 5 probe probe NN cord-347472-n6811ens 102 6 set set VBN cord-347472-n6811ens 102 7 , , , cord-347472-n6811ens 102 8 such such JJ cord-347472-n6811ens 102 9 as as IN cord-347472-n6811ens 102 10 the the DT cord-347472-n6811ens 102 11 one one NN cord-347472-n6811ens 102 12 described describe VBN cord-347472-n6811ens 102 13 here here RB cord-347472-n6811ens 102 14 , , , cord-347472-n6811ens 102 15 is be VBZ cord-347472-n6811ens 102 16 a a DT cord-347472-n6811ens 102 17 drop drop NN cord-347472-n6811ens 102 18 - - HYPH cord-347472-n6811ens 102 19 in in RP cord-347472-n6811ens 102 20 replacement replacement NN cord-347472-n6811ens 102 21 that that WDT cord-347472-n6811ens 102 22 can can MD cord-347472-n6811ens 102 23 be be VB cord-347472-n6811ens 102 24 manufactured manufacture VBN cord-347472-n6811ens 102 25 rapidly rapidly RB cord-347472-n6811ens 102 26 and and CC cord-347472-n6811ens 102 27 at at IN cord-347472-n6811ens 102 28 scale scale NN cord-347472-n6811ens 102 29 . . . cord-347472-n6811ens 103 1 It -PRON- PRP cord-347472-n6811ens 103 2 is be VBZ cord-347472-n6811ens 103 3 imperative imperative JJ cord-347472-n6811ens 103 4 that that IN cord-347472-n6811ens 103 5 the the DT cord-347472-n6811ens 103 6 CDC CDC NNP cord-347472-n6811ens 103 7 take take VB cord-347472-n6811ens 103 8 action action NN cord-347472-n6811ens 103 9 to to TO cord-347472-n6811ens 103 10 update update VB cord-347472-n6811ens 103 11 its -PRON- PRP$ cord-347472-n6811ens 103 12 clinical clinical JJ cord-347472-n6811ens 103 13 algorithms algorithm NNS cord-347472-n6811ens 103 14 and and CC cord-347472-n6811ens 103 15 specify specify VB cord-347472-n6811ens 103 16 a a DT cord-347472-n6811ens 103 17 re re NN cord-347472-n6811ens 103 18 - - JJ cord-347472-n6811ens 103 19 designed design VBN cord-347472-n6811ens 103 20 transcript transcript NN cord-347472-n6811ens 103 21 - - HYPH cord-347472-n6811ens 103 22 specific specific JJ cord-347472-n6811ens 103 23 extraction extraction NN cord-347472-n6811ens 103 24 control control NN cord-347472-n6811ens 103 25 that that WDT cord-347472-n6811ens 103 26 performs perform VBZ cord-347472-n6811ens 103 27 all all DT cord-347472-n6811ens 103 28 of of IN cord-347472-n6811ens 103 29 its -PRON- PRP$ cord-347472-n6811ens 103 30 claimed claim VBN cord-347472-n6811ens 103 31 , , , cord-347472-n6811ens 103 32 and and CC cord-347472-n6811ens 103 33 critically critically RB cord-347472-n6811ens 103 34 important important JJ cord-347472-n6811ens 103 35 , , , cord-347472-n6811ens 103 36 functions function NNS cord-347472-n6811ens 103 37 . . . cord-347472-n6811ens 104 1 5 5 LS cord-347472-n6811ens 104 2 . . . cord-347472-n6811ens 105 1 The the DT cord-347472-n6811ens 105 2 amount amount NN cord-347472-n6811ens 105 3 of of IN cord-347472-n6811ens 105 4 co co JJ cord-347472-n6811ens 105 5 - - JJ cord-347472-n6811ens 105 6 purified purify VBN cord-347472-n6811ens 105 7 DNA dna NN cord-347472-n6811ens 105 8 is be VBZ cord-347472-n6811ens 105 9 lower low JJR cord-347472-n6811ens 105 10 for for IN cord-347472-n6811ens 105 11 Trizol Trizol NNP cord-347472-n6811ens 105 12 - - HYPH cord-347472-n6811ens 105 13 purified purify VBN cord-347472-n6811ens 105 14 samples sample NNS cord-347472-n6811ens 105 15 despite despite IN cord-347472-n6811ens 105 16 use use NN cord-347472-n6811ens 105 17 of of IN cord-347472-n6811ens 105 18 a a DT cord-347472-n6811ens 105 19 larger large JJR cord-347472-n6811ens 105 20 fraction fraction NN cord-347472-n6811ens 105 21 of of IN cord-347472-n6811ens 105 22 the the DT cord-347472-n6811ens 105 23 sample sample NN cord-347472-n6811ens 105 24 . . . cord-347472-n6811ens 106 1 This this DT cord-347472-n6811ens 106 2 may may MD cord-347472-n6811ens 106 3 reflect reflect VB cord-347472-n6811ens 106 4 an an DT cord-347472-n6811ens 106 5 even even RB cord-347472-n6811ens 106 6 greater great JJR cord-347472-n6811ens 106 7 RNA RNA NNP cord-347472-n6811ens 106 8 : : : cord-347472-n6811ens 106 9 DNA dna NN cord-347472-n6811ens 106 10 co co NN cord-347472-n6811ens 106 11 - - JJ cord-347472-n6811ens 106 12 purification purification JJ cord-347472-n6811ens 106 13 ratio ratio NN cord-347472-n6811ens 106 14 but but CC cord-347472-n6811ens 106 15 may may MD cord-347472-n6811ens 106 16 also also RB cord-347472-n6811ens 106 17 reflect reflect VB cord-347472-n6811ens 106 18 evolving evolve VBG cord-347472-n6811ens 106 19 clinical clinical JJ cord-347472-n6811ens 106 20 skills skill NNS cord-347472-n6811ens 106 21 in in IN cord-347472-n6811ens 106 22 patient patient JJ cord-347472-n6811ens 106 23 sample sample NN cord-347472-n6811ens 106 24 collection collection NN cord-347472-n6811ens 106 25 during during IN cord-347472-n6811ens 106 26 COVID-19 covid-19 JJ cord-347472-n6811ens 106 27 testing testing NN cord-347472-n6811ens 106 28 . . . cord-347472-n6811ens 107 1 6 6 LS cord-347472-n6811ens 107 2 . . . cord-347472-n6811ens 108 1 The the DT cord-347472-n6811ens 108 2 CDC CDC NNP cord-347472-n6811ens 108 3 EUA EUA NNP cord-347472-n6811ens 108 4 states state VBZ cord-347472-n6811ens 108 5 that that IN cord-347472-n6811ens 108 6 the the DT cord-347472-n6811ens 108 7 extraction extraction NN cord-347472-n6811ens 108 8 control control NN cord-347472-n6811ens 108 9 is be VBZ cord-347472-n6811ens 108 10 considered consider VBN cord-347472-n6811ens 108 11 positive positive JJ cord-347472-n6811ens 108 12 / / , cord-347472-n6811ens 108 13 indicative indicative JJ cord-347472-n6811ens 108 14 of of IN cord-347472-n6811ens 108 15 a a DT cord-347472-n6811ens 108 16 successful successful JJ cord-347472-n6811ens 108 17 extraction extraction NN cord-347472-n6811ens 108 18 , , , cord-347472-n6811ens 108 19 where where WRB cord-347472-n6811ens 108 20 control control NN cord-347472-n6811ens 108 21 probe probe VB cord-347472-n6811ens 108 22 Ct Ct NNP cord-347472-n6811ens 108 23 < < XX cord-347472-n6811ens 108 24 40 40 CD cord-347472-n6811ens 108 25 cycles cycle NNS cord-347472-n6811ens 108 26 using use VBG cord-347472-n6811ens 108 27 a a DT cord-347472-n6811ens 108 28 7500FASTDx 7500fastdx JJ cord-347472-n6811ens 108 29 instrument instrument NN cord-347472-n6811ens 108 30 ( ( -LRB- cord-347472-n6811ens 108 31 see see VB cord-347472-n6811ens 108 32 Supplementary Supplementary NNP cord-347472-n6811ens 108 33 Text Text NNP cord-347472-n6811ens 108 34 ) ) -RRB- cord-347472-n6811ens 108 35 . . . cord-347472-n6811ens 109 1 7 7 CD cord-347472-n6811ens 109 2 . . . cord-347472-n6811ens 110 1 Multiple multiple JJ cord-347472-n6811ens 110 2 vendors vendor NNS cord-347472-n6811ens 110 3 of of IN cord-347472-n6811ens 110 4 purified purify VBN cord-347472-n6811ens 110 5 " " `` cord-347472-n6811ens 110 6 reference reference NN cord-347472-n6811ens 110 7 " " '' cord-347472-n6811ens 110 8 DNA dna NN cord-347472-n6811ens 110 9 were be VBD cord-347472-n6811ens 110 10 used use VBN cord-347472-n6811ens 110 11 with with IN cord-347472-n6811ens 110 12 similar similar JJ cord-347472-n6811ens 110 13 results result NNS cord-347472-n6811ens 110 14 . . . cord-347472-n6811ens 111 1 Promega Promega NNP cord-347472-n6811ens 111 2 Human Human NNP cord-347472-n6811ens 111 3 Male Male NNP cord-347472-n6811ens 111 4 control control NN cord-347472-n6811ens 111 5 DNA dna NN cord-347472-n6811ens 111 6 is be VBZ cord-347472-n6811ens 111 7 available available JJ cord-347472-n6811ens 111 8 in in IN cord-347472-n6811ens 111 9 relatively relatively RB cord-347472-n6811ens 111 10 large large JJ cord-347472-n6811ens 111 11 lot lot NN cord-347472-n6811ens 111 12 - - HYPH cord-347472-n6811ens 111 13 controlled control VBN cord-347472-n6811ens 111 14 batches batch NNS cord-347472-n6811ens 111 15 , , , cord-347472-n6811ens 111 16 validated validate VBN cord-347472-n6811ens 111 17 , , , cord-347472-n6811ens 111 18 is be VBZ cord-347472-n6811ens 111 19 widely widely RB cord-347472-n6811ens 111 20 cited cite VBN cord-347472-n6811ens 111 21 , , , cord-347472-n6811ens 111 22 and and CC cord-347472-n6811ens 111 23 is be VBZ cord-347472-n6811ens 111 24 used use VBN cord-347472-n6811ens 111 25 in in IN cord-347472-n6811ens 111 26 all all DT cord-347472-n6811ens 111 27 figures figure NNS cord-347472-n6811ens 111 28 shown show VBN cord-347472-n6811ens 111 29 here here RB cord-347472-n6811ens 111 30 . . . cord-347472-n6811ens 112 1 8 8 CD cord-347472-n6811ens 112 2 . . . cord-347472-n6811ens 113 1 Nasopharyngeal Nasopharyngeal NNP cord-347472-n6811ens 113 2 ( ( -LRB- cord-347472-n6811ens 113 3 NP NP NNP cord-347472-n6811ens 113 4 ) ) -RRB- cord-347472-n6811ens 113 5 swabs swab NNS cord-347472-n6811ens 113 6 in in IN cord-347472-n6811ens 113 7 transport transport NN cord-347472-n6811ens 113 8 media medium NNS cord-347472-n6811ens 113 9 are be VBP cord-347472-n6811ens 113 10 a a DT cord-347472-n6811ens 113 11 particularly particularly RB cord-347472-n6811ens 113 12 sanguineous sanguineous JJ cord-347472-n6811ens 113 13 mixture mixture NN cord-347472-n6811ens 113 14 that that WDT cord-347472-n6811ens 113 15 are be VBP cord-347472-n6811ens 113 16 frequently frequently RB cord-347472-n6811ens 113 17 received receive VBN cord-347472-n6811ens 113 18 with with IN cord-347472-n6811ens 113 19 co co JJ cord-347472-n6811ens 113 20 - - JJ cord-347472-n6811ens 113 21 collected collect VBN cord-347472-n6811ens 113 22 patient patient JJ cord-347472-n6811ens 113 23 cells cell NNS cord-347472-n6811ens 113 24 and and CC cord-347472-n6811ens 113 25 tissue tissue NN cord-347472-n6811ens 113 26 . . . cord-347472-n6811ens 114 1 While while IN cord-347472-n6811ens 114 2 there there EX cord-347472-n6811ens 114 3 may may MD cord-347472-n6811ens 114 4 be be VB cord-347472-n6811ens 114 5 more more RBR cord-347472-n6811ens 114 6 patient patient JJ cord-347472-n6811ens 114 7 DNA dna NN cord-347472-n6811ens 114 8 in in IN cord-347472-n6811ens 114 9 NP NP NNP cord-347472-n6811ens 114 10 - - HYPH cord-347472-n6811ens 114 11 derived derive VBN cord-347472-n6811ens 114 12 specimens specimen NNS cord-347472-n6811ens 114 13 than than IN cord-347472-n6811ens 114 14 other other JJ cord-347472-n6811ens 114 15 collection collection NN cord-347472-n6811ens 114 16 types type NNS cord-347472-n6811ens 114 17 , , , cord-347472-n6811ens 114 18 human human JJ cord-347472-n6811ens 114 19 genomic genomic JJ cord-347472-n6811ens 114 20 DNA dna NN cord-347472-n6811ens 114 21 is be VBZ cord-347472-n6811ens 114 22 routinely routinely RB cord-347472-n6811ens 114 23 intentionally intentionally RB cord-347472-n6811ens 114 24 collected collect VBN cord-347472-n6811ens 114 25 from from IN cord-347472-n6811ens 114 26 saliva saliva NN cord-347472-n6811ens 114 27 , , , cord-347472-n6811ens 114 28 sputum sputum NN cord-347472-n6811ens 114 29 , , , cord-347472-n6811ens 114 30 and and CC cord-347472-n6811ens 114 31 other other JJ cord-347472-n6811ens 114 32 COVID-19 COVID-19 NNP cord-347472-n6811ens 114 33 relevant relevant JJ cord-347472-n6811ens 114 34 anatomic anatomic JJ cord-347472-n6811ens 114 35 sites site NNS cord-347472-n6811ens 114 36 . . . cord-347472-n6811ens 115 1 9 9 LS cord-347472-n6811ens 115 2 . . . cord-347472-n6811ens 116 1 A a DT cord-347472-n6811ens 116 2 properly properly RB cord-347472-n6811ens 116 3 - - HYPH cord-347472-n6811ens 116 4 processed process VBN cord-347472-n6811ens 116 5 blank blank JJ cord-347472-n6811ens 116 6 swab swab NN cord-347472-n6811ens 116 7 or or CC cord-347472-n6811ens 116 8 empty empty JJ cord-347472-n6811ens 116 9 vial vial NN cord-347472-n6811ens 116 10 of of IN cord-347472-n6811ens 116 11 VTM VTM NNP cord-347472-n6811ens 116 12 will will MD cord-347472-n6811ens 116 13 generate generate VB cord-347472-n6811ens 116 14 , , , cord-347472-n6811ens 116 15 as as IN cord-347472-n6811ens 116 16 intended intend VBN cord-347472-n6811ens 116 17 , , , cord-347472-n6811ens 116 18 a a DT cord-347472-n6811ens 116 19 spikein spikein NNP cord-347472-n6811ens 116 20 positive positive JJ cord-347472-n6811ens 116 21 signal signal NN cord-347472-n6811ens 116 22 . . . cord-347472-n6811ens 116 23 _SP cord-347472-n6811ens 117 1 Figures figure NNS cord-347472-n6811ens 118 1 S1-S3 S1-S3 NNP cord-347472-n6811ens 119 1 Table table NN cord-347472-n6811ens 119 2 S1 S1 NNP cord-347472-n6811ens 119 3 Fig Fig NNP cord-347472-n6811ens 119 4 . . . cord-347472-n6811ens 120 1 1 1 LS cord-347472-n6811ens 120 2 . . . cord-347472-n6811ens 121 1 A. A. NNP cord-347472-n6811ens 122 1 The the DT cord-347472-n6811ens 122 2 CDC CDC NNP cord-347472-n6811ens 122 3 - - HYPH cord-347472-n6811ens 122 4 specified specify VBN cord-347472-n6811ens 122 5 SARS SARS NNP cord-347472-n6811ens 122 6 - - HYPH cord-347472-n6811ens 122 7 CoV-2 CoV-2 NNP cord-347472-n6811ens 122 8 qPCR qpcr NN cord-347472-n6811ens 122 9 assay assay NN cord-347472-n6811ens 122 10 and and CC cord-347472-n6811ens 122 11 associated associate VBN cord-347472-n6811ens 122 12 clinical clinical JJ cord-347472-n6811ens 122 13 algorithm algorithm NN cord-347472-n6811ens 122 14 are be VBP cord-347472-n6811ens 122 15 intended intend VBN cord-347472-n6811ens 122 16 to to TO cord-347472-n6811ens 122 17 inform inform VB cord-347472-n6811ens 122 18 for for IN cord-347472-n6811ens 122 19 presence presence NN cord-347472-n6811ens 122 20 of of IN cord-347472-n6811ens 122 21 virus virus NN cord-347472-n6811ens 122 22 , , , cord-347472-n6811ens 122 23 or or CC cord-347472-n6811ens 122 24 that that IN cord-347472-n6811ens 122 25 the the DT cord-347472-n6811ens 122 26 assay assay NN cord-347472-n6811ens 122 27 worked work VBD cord-347472-n6811ens 122 28 and and CC cord-347472-n6811ens 122 29 could could MD cord-347472-n6811ens 122 30 have have VB cord-347472-n6811ens 122 31 found find VBN cord-347472-n6811ens 122 32 virus virus NN cord-347472-n6811ens 122 33 , , , cord-347472-n6811ens 122 34 but but CC cord-347472-n6811ens 122 35 that that IN cord-347472-n6811ens 122 36 no no DT cord-347472-n6811ens 122 37 virus virus NN cord-347472-n6811ens 122 38 was be VBD cord-347472-n6811ens 122 39 found find VBN cord-347472-n6811ens 122 40 . . . cord-347472-n6811ens 123 1 Signal signal NN cord-347472-n6811ens 123 2 from from IN cord-347472-n6811ens 123 3 virus virus NN cord-347472-n6811ens 123 4 - - HYPH cord-347472-n6811ens 123 5 targeting target VBG cord-347472-n6811ens 123 6 RT- RT- NNS cord-347472-n6811ens 124 1 qPCRs qPCRs NNP cord-347472-n6811ens 124 2 is be VBZ cord-347472-n6811ens 124 3 sufficient sufficient JJ cord-347472-n6811ens 124 4 to to TO cord-347472-n6811ens 124 5 report report VB cord-347472-n6811ens 124 6 " " `` cord-347472-n6811ens 124 7 Positive positive JJ cord-347472-n6811ens 124 8 2019-nCoV 2019-ncov CD cord-347472-n6811ens 124 9 " " '' cord-347472-n6811ens 124 10 . . . cord-347472-n6811ens 125 1 An an DT cord-347472-n6811ens 125 2 " " `` cord-347472-n6811ens 125 3 invalid invalid JJ cord-347472-n6811ens 125 4 " " '' cord-347472-n6811ens 125 5 report report NN cord-347472-n6811ens 125 6 is be VBZ cord-347472-n6811ens 125 7 returned return VBN cord-347472-n6811ens 125 8 where where WRB cord-347472-n6811ens 125 9 all all DT cord-347472-n6811ens 125 10 viral viral JJ cord-347472-n6811ens 125 11 and and CC cord-347472-n6811ens 125 12 control control NN cord-347472-n6811ens 125 13 probes probe NNS cord-347472-n6811ens 125 14 are be VBP cord-347472-n6811ens 125 15 negative negative JJ cord-347472-n6811ens 125 16 . . . cord-347472-n6811ens 126 1 The the DT cord-347472-n6811ens 126 2 clinical clinical JJ cord-347472-n6811ens 126 3 interpretation interpretation NN cord-347472-n6811ens 126 4 is be VBZ cord-347472-n6811ens 126 5 " " `` cord-347472-n6811ens 126 6 2019-nCoV 2019-ncov CD cord-347472-n6811ens 126 7 not not RB cord-347472-n6811ens 126 8 detected detect VBN cord-347472-n6811ens 126 9 " " '' cord-347472-n6811ens 126 10 when when WRB cord-347472-n6811ens 126 11 a a DT cord-347472-n6811ens 126 12 human human JJ cord-347472-n6811ens 126 13 control control NN cord-347472-n6811ens 126 14 , , , cord-347472-n6811ens 126 15 targeting target VBG cord-347472-n6811ens 126 16 the the DT cord-347472-n6811ens 126 17 RPP30 RPP30 NNP cord-347472-n6811ens 126 18 gene gene NN cord-347472-n6811ens 126 19 , , , cord-347472-n6811ens 126 20 returns return VBZ cord-347472-n6811ens 126 21 a a DT cord-347472-n6811ens 126 22 positive positive JJ cord-347472-n6811ens 126 23 signal signal NN cord-347472-n6811ens 126 24 and and CC cord-347472-n6811ens 126 25 when when WRB cord-347472-n6811ens 126 26 viral viral JJ cord-347472-n6811ens 126 27 probes probe NNS cord-347472-n6811ens 126 28 are be VBP cord-347472-n6811ens 126 29 negative negative JJ cord-347472-n6811ens 126 30 . . . cord-347472-n6811ens 127 1 Patients patient NNS cord-347472-n6811ens 127 2 who who WP cord-347472-n6811ens 127 3 are be VBP cord-347472-n6811ens 127 4 truly truly RB cord-347472-n6811ens 127 5 virus virus NN cord-347472-n6811ens 127 6 negative negative JJ cord-347472-n6811ens 127 7 will will MD cord-347472-n6811ens 127 8 fall fall VB cord-347472-n6811ens 127 9 into into IN cord-347472-n6811ens 127 10 this this DT cord-347472-n6811ens 127 11 category category NN cord-347472-n6811ens 127 12 . . . cord-347472-n6811ens 128 1 So so RB cord-347472-n6811ens 128 2 will will MD cord-347472-n6811ens 128 3 patients patient NNS cord-347472-n6811ens 128 4 for for IN cord-347472-n6811ens 128 5 whom whom WP cord-347472-n6811ens 128 6 sample sample NN cord-347472-n6811ens 128 7 collection collection NN cord-347472-n6811ens 128 8 , , , cord-347472-n6811ens 128 9 handling handling NN cord-347472-n6811ens 128 10 , , , cord-347472-n6811ens 128 11 or or CC cord-347472-n6811ens 128 12 analysis analysis NN cord-347472-n6811ens 128 13 problems problem NNS cord-347472-n6811ens 128 14 have have VBP cord-347472-n6811ens 128 15 occurred occur VBN cord-347472-n6811ens 128 16 , , , cord-347472-n6811ens 128 17 leading lead VBG cord-347472-n6811ens 128 18 to to IN cord-347472-n6811ens 128 19 false false JJ cord-347472-n6811ens 128 20 negative negative JJ cord-347472-n6811ens 128 21 results result NNS cord-347472-n6811ens 128 22 . . . cord-347472-n6811ens 129 1 B. B. NNP cord-347472-n6811ens 130 1 The the DT cord-347472-n6811ens 130 2 CDC CDC NNP cord-347472-n6811ens 130 3 - - HYPH cord-347472-n6811ens 130 4 specified specify VBN cord-347472-n6811ens 130 5 extraction extraction NN cord-347472-n6811ens 130 6 control control NN cord-347472-n6811ens 130 7 primers primer NNS cord-347472-n6811ens 130 8 and and CC cord-347472-n6811ens 130 9 probe probe NN cord-347472-n6811ens 130 10 recognize recognize VB cord-347472-n6811ens 130 11 a a DT cord-347472-n6811ens 130 12 sequence sequence NN cord-347472-n6811ens 130 13 that that WDT cord-347472-n6811ens 130 14 is be VBZ cord-347472-n6811ens 130 15 identical identical JJ cord-347472-n6811ens 130 16 in in IN cord-347472-n6811ens 130 17 reverse reverse NN cord-347472-n6811ens 130 18 transcribed transcribe VBN cord-347472-n6811ens 130 19 RNA RNA NNP cord-347472-n6811ens 130 20 and and CC cord-347472-n6811ens 130 21 genomic genomic JJ cord-347472-n6811ens 130 22 DNA dna NN cord-347472-n6811ens 130 23 . . . cord-347472-n6811ens 131 1 Megablast megablast JJ cord-347472-n6811ens 131 2 search search NN cord-347472-n6811ens 131 3 of of IN cord-347472-n6811ens 131 4 the the DT cord-347472-n6811ens 131 5 human human JJ cord-347472-n6811ens 131 6 refseq_dna refseq_dna NNS cord-347472-n6811ens 131 7 database database NN cord-347472-n6811ens 131 8 identifies identify VBZ cord-347472-n6811ens 131 9 perfect perfect JJ cord-347472-n6811ens 131 10 matches match NNS cord-347472-n6811ens 131 11 for for IN cord-347472-n6811ens 131 12 the the DT cord-347472-n6811ens 131 13 CDC CDC NNP cord-347472-n6811ens 131 14 - - HYPH cord-347472-n6811ens 131 15 control control NN cord-347472-n6811ens 131 16 primers primer NNS cord-347472-n6811ens 131 17 , , , cord-347472-n6811ens 131 18 RP RP NNP cord-347472-n6811ens 131 19 - - HYPH cord-347472-n6811ens 131 20 F F NNP cord-347472-n6811ens 131 21 and and CC cord-347472-n6811ens 131 22 RP RP NNP cord-347472-n6811ens 131 23 - - HYPH cord-347472-n6811ens 131 24 R R NNP cord-347472-n6811ens 131 25 , , , cord-347472-n6811ens 131 26 and and CC cord-347472-n6811ens 131 27 probe probe NN cord-347472-n6811ens 131 28 , , , cord-347472-n6811ens 131 29 RP RP NNP cord-347472-n6811ens 132 1 -P. -P. NFP cord-347472-n6811ens 132 2 This this DT cord-347472-n6811ens 132 3 design design NN cord-347472-n6811ens 132 4 amplifies amplify VBZ cord-347472-n6811ens 132 5 and and CC cord-347472-n6811ens 132 6 detects detect VBZ cord-347472-n6811ens 132 7 a a DT cord-347472-n6811ens 132 8 65 65 CD cord-347472-n6811ens 132 9 base base NN cord-347472-n6811ens 132 10 pair pair NN cord-347472-n6811ens 132 11 amplicon amplicon NN cord-347472-n6811ens 132 12 located locate VBN cord-347472-n6811ens 132 13 entirely entirely RB cord-347472-n6811ens 132 14 within within IN cord-347472-n6811ens 132 15 exon exon NN cord-347472-n6811ens 132 16 1 1 CD cord-347472-n6811ens 132 17 of of IN cord-347472-n6811ens 132 18 the the DT cord-347472-n6811ens 132 19 RPP30 RPP30 NNP cord-347472-n6811ens 132 20 gene gene NN cord-347472-n6811ens 132 21 , , , cord-347472-n6811ens 132 22 located locate VBN cord-347472-n6811ens 132 23 on on IN cord-347472-n6811ens 132 24 human human JJ cord-347472-n6811ens 132 25 chromosome chromosome NN cord-347472-n6811ens 132 26 10 10 CD cord-347472-n6811ens 132 27 ( ( -LRB- cord-347472-n6811ens 132 28 coordinates coordinate NNS cord-347472-n6811ens 132 29 from from IN cord-347472-n6811ens 132 30 hg38 hg38 NNP cord-347472-n6811ens 132 31 human human JJ cord-347472-n6811ens 132 32 genome genome NN cord-347472-n6811ens 132 33 build build NN cord-347472-n6811ens 132 34 ) ) -RRB- cord-347472-n6811ens 132 35 . . . cord-347472-n6811ens 133 1 Specific specific JJ cord-347472-n6811ens 133 2 detection detection NN cord-347472-n6811ens 133 3 of of IN cord-347472-n6811ens 133 4 reverse reverse RB cord-347472-n6811ens 133 5 - - HYPH cord-347472-n6811ens 133 6 transcribed transcribe VBN cord-347472-n6811ens 133 7 RNAs rna NNS cord-347472-n6811ens 133 8 can can MD cord-347472-n6811ens 133 9 be be VB cord-347472-n6811ens 133 10 accomplished accomplish VBN cord-347472-n6811ens 133 11 by by IN cord-347472-n6811ens 133 12 design design NN cord-347472-n6811ens 133 13 of of IN cord-347472-n6811ens 133 14 an an DT cord-347472-n6811ens 133 15 exon exon NN cord-347472-n6811ens 133 16 - - HYPH cord-347472-n6811ens 133 17 exon exon NN cord-347472-n6811ens 133 18 junction junction NN cord-347472-n6811ens 133 19 spanning span VBG cord-347472-n6811ens 133 20 amplicon amplicon NN cord-347472-n6811ens 133 21 and and CC cord-347472-n6811ens 133 22 probe probe NN cord-347472-n6811ens 133 23 ( ( -LRB- cord-347472-n6811ens 133 24 Supplemental Supplemental NNP cord-347472-n6811ens 133 25 Figure Figure NNP cord-347472-n6811ens 133 26 3 3 CD cord-347472-n6811ens 133 27 ) ) -RRB- cord-347472-n6811ens 133 28 . . . cord-347472-n6811ens 134 1 Genomic genomic JJ cord-347472-n6811ens 134 2 DNA dna NN cord-347472-n6811ens 134 3 is be VBZ cord-347472-n6811ens 134 4 co co VBN cord-347472-n6811ens 134 5 - - JJ cord-347472-n6811ens 134 6 purified purify VBN cord-347472-n6811ens 135 1 during during IN cord-347472-n6811ens 135 2 RNA RNA NNP cord-347472-n6811ens 135 3 extraction extraction NN cord-347472-n6811ens 135 4 of of IN cord-347472-n6811ens 135 5 clinical clinical JJ cord-347472-n6811ens 135 6 COVID-19 covid-19 NN cord-347472-n6811ens 135 7 samples sample NNS cord-347472-n6811ens 135 8 and and CC cord-347472-n6811ens 135 9 is be VBZ cord-347472-n6811ens 135 10 sufficient sufficient JJ cord-347472-n6811ens 135 11 to to TO cord-347472-n6811ens 135 12 generate generate VB cord-347472-n6811ens 135 13 a a DT cord-347472-n6811ens 135 14 positive positive JJ cord-347472-n6811ens 135 15 signal signal NN cord-347472-n6811ens 135 16 using use VBG cord-347472-n6811ens 135 17 the the DT cord-347472-n6811ens 135 18 CDC CDC NNP cord-347472-n6811ens 135 19 extraction extraction NN cord-347472-n6811ens 135 20 control control NN cord-347472-n6811ens 135 21 . . . cord-347472-n6811ens 136 1 A. A. NNP cord-347472-n6811ens 136 2 qPCR qPCR NNP cord-347472-n6811ens 136 3 ( ( -LRB- cord-347472-n6811ens 136 4 without without IN cord-347472-n6811ens 136 5 reverse reverse JJ cord-347472-n6811ens 136 6 transcription transcription NN cord-347472-n6811ens 136 7 ) ) -RRB- cord-347472-n6811ens 136 8 was be VBD cord-347472-n6811ens 136 9 performed perform VBN cord-347472-n6811ens 136 10 using use VBG cord-347472-n6811ens 136 11 the the DT cord-347472-n6811ens 136 12 CDC CDC NNP cord-347472-n6811ens 136 13 extraction extraction NN cord-347472-n6811ens 136 14 control control NN cord-347472-n6811ens 136 15 ( ( -LRB- cord-347472-n6811ens 136 16 RP RP NNP cord-347472-n6811ens 136 17 ) ) -RRB- cord-347472-n6811ens 136 18 probe probe NN cord-347472-n6811ens 136 19 . . . cord-347472-n6811ens 137 1 Raw raw JJ cord-347472-n6811ens 137 2 Ct Ct NNP cord-347472-n6811ens 137 3 values value NNS cord-347472-n6811ens 137 4 are be VBP cord-347472-n6811ens 137 5 shown show VBN cord-347472-n6811ens 137 6 . . . cord-347472-n6811ens 138 1 A a DT cord-347472-n6811ens 138 2 total total NN cord-347472-n6811ens 138 3 of of IN cord-347472-n6811ens 138 4 28 28 CD cord-347472-n6811ens 138 5 representative representative NN cord-347472-n6811ens 138 6 COVID-19 covid-19 CD cord-347472-n6811ens 138 7 positive positive JJ cord-347472-n6811ens 138 8 clinical clinical JJ cord-347472-n6811ens 138 9 samples sample NNS cord-347472-n6811ens 138 10 were be VBD cord-347472-n6811ens 138 11 tested test VBN cord-347472-n6811ens 138 12 , , , cord-347472-n6811ens 138 13 fourteen fourteen CD cord-347472-n6811ens 138 14 purified purify VBN cord-347472-n6811ens 138 15 by by IN cord-347472-n6811ens 138 16 automated automate VBN cord-347472-n6811ens 138 17 silica silica NN cord-347472-n6811ens 138 18 spin spin NN cord-347472-n6811ens 138 19 - - HYPH cord-347472-n6811ens 138 20 column column NN cord-347472-n6811ens 138 21 ( ( -LRB- cord-347472-n6811ens 138 22 Qiagen Qiagen NNP cord-347472-n6811ens 138 23 ) ) -RRB- cord-347472-n6811ens 138 24 and and CC cord-347472-n6811ens 138 25 fourteen fourteen CD cord-347472-n6811ens 138 26 by by IN cord-347472-n6811ens 138 27 manual manual JJ cord-347472-n6811ens 138 28 organic organic JJ cord-347472-n6811ens 138 29 extractions extraction NNS cord-347472-n6811ens 138 30 ( ( -LRB- cord-347472-n6811ens 138 31 Trizol Trizol NNP cord-347472-n6811ens 138 32 , , , cord-347472-n6811ens 138 33 Materials Materials NNPS cord-347472-n6811ens 138 34 and and CC cord-347472-n6811ens 138 35 Methods Methods NNPS cord-347472-n6811ens 138 36 ) ) -RRB- cord-347472-n6811ens 138 37 . . . cord-347472-n6811ens 139 1 All all DT cord-347472-n6811ens 139 2 samples sample NNS cord-347472-n6811ens 139 3 contained contain VBD cord-347472-n6811ens 139 4 genomic genomic JJ cord-347472-n6811ens 139 5 DNA dna NN cord-347472-n6811ens 139 6 and and CC cord-347472-n6811ens 139 7 generated generate VBD cord-347472-n6811ens 139 8 extraction extraction NN cord-347472-n6811ens 139 9 control control NN cord-347472-n6811ens 139 10 positive positive JJ cord-347472-n6811ens 139 11 signals signal NNS cord-347472-n6811ens 139 12 well well RB cord-347472-n6811ens 139 13 above above IN cord-347472-n6811ens 139 14 the the DT cord-347472-n6811ens 139 15 CDC CDC NNP cord-347472-n6811ens 139 16 assay assay NN cord-347472-n6811ens 139 17 threshold threshold NN cord-347472-n6811ens 139 18 ( ( -LRB- cord-347472-n6811ens 139 19 40 40 CD cord-347472-n6811ens 139 20 cycles cycle NNS cord-347472-n6811ens 139 21 , , , cord-347472-n6811ens 139 22 horizontal horizontal JJ cord-347472-n6811ens 139 23 dashed dash VBN cord-347472-n6811ens 139 24 line line NN cord-347472-n6811ens 139 25 ) ) -RRB- cord-347472-n6811ens 139 26 . . . cord-347472-n6811ens 140 1 Significantly significantly RB cord-347472-n6811ens 140 2 more more RBR cord-347472-n6811ens 140 3 genomic genomic JJ cord-347472-n6811ens 140 4 DNA dna NN cord-347472-n6811ens 140 5 was be VBD cord-347472-n6811ens 140 6 present present JJ cord-347472-n6811ens 140 7 in in IN cord-347472-n6811ens 140 8 samples sample NNS cord-347472-n6811ens 140 9 purified purify VBN cord-347472-n6811ens 140 10 by by IN cord-347472-n6811ens 140 11 silica silica NN cord-347472-n6811ens 140 12 spin spin NN cord-347472-n6811ens 140 13 - - HYPH cord-347472-n6811ens 140 14 columns column NNS cord-347472-n6811ens 140 15 compared compare VBN cord-347472-n6811ens 140 16 to to IN cord-347472-n6811ens 140 17 organic organic JJ cord-347472-n6811ens 140 18 extraction extraction NN cord-347472-n6811ens 140 19 ( ( -LRB- cord-347472-n6811ens 140 20 mean mean NNP cord-347472-n6811ens 140 21 Ct Ct NNP cord-347472-n6811ens 140 22 of of IN cord-347472-n6811ens 140 23 29.6 29.6 CD cord-347472-n6811ens 140 24 and and CC cord-347472-n6811ens 140 25 34.3 34.3 CD cord-347472-n6811ens 140 26 , , , cord-347472-n6811ens 140 27 respectively respectively RB cord-347472-n6811ens 140 28 , , , cord-347472-n6811ens 140 29 p= p= NNP cord-347472-n6811ens 140 30 1.21x10 1.21x10 CD cord-347472-n6811ens 140 31 -6 -6 NNP cord-347472-n6811ens 140 32 , , , cord-347472-n6811ens 140 33 unpaired unpaired JJ cord-347472-n6811ens 140 34 t t NN cord-347472-n6811ens 140 35 ) ) -RRB- cord-347472-n6811ens 140 36 . . . cord-347472-n6811ens 141 1 Co co NN cord-347472-n6811ens 141 2 - - NN cord-347472-n6811ens 141 3 purification purification NN cord-347472-n6811ens 141 4 of of IN cord-347472-n6811ens 141 5 DNA dna NN cord-347472-n6811ens 141 6 is be VBZ cord-347472-n6811ens 141 7 to to TO cord-347472-n6811ens 141 8 be be VB cord-347472-n6811ens 141 9 expected expect VBN cord-347472-n6811ens 141 10 based base VBN cord-347472-n6811ens 141 11 on on IN cord-347472-n6811ens 141 12 the the DT cord-347472-n6811ens 141 13 mechanisms mechanism NNS cord-347472-n6811ens 141 14 of of IN cord-347472-n6811ens 141 15 purification purification NN cord-347472-n6811ens 141 16 used use VBN cord-347472-n6811ens 141 17 , , , cord-347472-n6811ens 141 18 and and CC cord-347472-n6811ens 141 19 is be VBZ cord-347472-n6811ens 141 20 openly openly RB cord-347472-n6811ens 141 21 caveated caveate VBN cord-347472-n6811ens 141 22 in in IN cord-347472-n6811ens 141 23 vendor vendor NN cord-347472-n6811ens 141 24 literature literature NN cord-347472-n6811ens 141 25 ( ( -LRB- cord-347472-n6811ens 141 26 13 13 CD cord-347472-n6811ens 141 27 ) ) -RRB- cord-347472-n6811ens 141 28 . . . cord-347472-n6811ens 142 1 Per per IN cord-347472-n6811ens 142 2 - - HYPH cord-347472-n6811ens 142 3 plate plate NN cord-347472-n6811ens 142 4 process process NN cord-347472-n6811ens 142 5 controls control NNS cord-347472-n6811ens 142 6 , , , cord-347472-n6811ens 142 7 shown show VBN cord-347472-n6811ens 142 8 , , , cord-347472-n6811ens 142 9 contained contain VBD cord-347472-n6811ens 142 10 8.6 8.6 CD cord-347472-n6811ens 142 11 ng ng NN cord-347472-n6811ens 142 12 of of IN cord-347472-n6811ens 142 13 genomic genomic JJ cord-347472-n6811ens 142 14 DNA dna NN cord-347472-n6811ens 142 15 , , , cord-347472-n6811ens 142 16 equivalent equivalent JJ cord-347472-n6811ens 142 17 to to IN cord-347472-n6811ens 142 18 ~1250 ~1250 XX cord-347472-n6811ens 142 19 diploid diploid JJ cord-347472-n6811ens 142 20 cells cell NNS cord-347472-n6811ens 142 21 . . . cord-347472-n6811ens 143 1 B. B. NNP cord-347472-n6811ens 143 2 Single single JJ cord-347472-n6811ens 143 3 - - HYPH cord-347472-n6811ens 143 4 cell cell NN cord-347472-n6811ens 143 5 equivalents equivalent NNS cord-347472-n6811ens 143 6 of of IN cord-347472-n6811ens 143 7 purified purify VBN cord-347472-n6811ens 143 8 genomic genomic JJ cord-347472-n6811ens 143 9 DNA dna NN cord-347472-n6811ens 143 10 , , , cord-347472-n6811ens 143 11 absent absent JJ cord-347472-n6811ens 143 12 RNA RNA NNP cord-347472-n6811ens 143 13 , , , cord-347472-n6811ens 143 14 are be VBP cord-347472-n6811ens 143 15 sufficient sufficient JJ cord-347472-n6811ens 143 16 to to TO cord-347472-n6811ens 143 17 generate generate VB cord-347472-n6811ens 143 18 an an DT cord-347472-n6811ens 143 19 " " `` cord-347472-n6811ens 143 20 extraction extraction NN cord-347472-n6811ens 143 21 control control NN cord-347472-n6811ens 143 22 positive positive JJ cord-347472-n6811ens 143 23 " " `` cord-347472-n6811ens 143 24 signal signal NN cord-347472-n6811ens 143 25 using use VBG cord-347472-n6811ens 143 26 the the DT cord-347472-n6811ens 143 27 CDC CDC NNP cord-347472-n6811ens 143 28 - - HYPH cord-347472-n6811ens 143 29 RP RP NNP cord-347472-n6811ens 143 30 probe probe NN cord-347472-n6811ens 143 31 . . . cord-347472-n6811ens 144 1 RT RT NNP cord-347472-n6811ens 144 2 - - HYPH cord-347472-n6811ens 144 3 qPCR qPCR NNP cord-347472-n6811ens 144 4 was be VBD cord-347472-n6811ens 144 5 performed perform VBN cord-347472-n6811ens 144 6 using use VBG cord-347472-n6811ens 144 7 Viral Viral NNP cord-347472-n6811ens 144 8 One- One- NNP cord-347472-n6811ens 144 9 Step Step NNP cord-347472-n6811ens 144 10 Mastermix Mastermix NNP cord-347472-n6811ens 144 11 ( ( -LRB- cord-347472-n6811ens 144 12 Materials material NNS cord-347472-n6811ens 144 13 and and CC cord-347472-n6811ens 144 14 Methods Methods NNPS cord-347472-n6811ens 144 15 ) ) -RRB- cord-347472-n6811ens 144 16 on on IN cord-347472-n6811ens 144 17 2-fold 2-fold CD cord-347472-n6811ens 144 18 serial serial JJ cord-347472-n6811ens 144 19 dilutions dilution NNS cord-347472-n6811ens 144 20 of of IN cord-347472-n6811ens 144 21 a a DT cord-347472-n6811ens 144 22 commercially commercially RB cord-347472-n6811ens 144 23 - - HYPH cord-347472-n6811ens 144 24 supplied supply VBN cord-347472-n6811ens 144 25 reference reference NN cord-347472-n6811ens 144 26 human human JJ cord-347472-n6811ens 144 27 DNA dna NN cord-347472-n6811ens 144 28 ( ( -LRB- cord-347472-n6811ens 144 29 RNA rna NN cord-347472-n6811ens 144 30 - - HYPH cord-347472-n6811ens 144 31 free free JJ cord-347472-n6811ens 144 32 ) ) -RRB- cord-347472-n6811ens 144 33 . . . cord-347472-n6811ens 145 1 Dilution dilution NN cord-347472-n6811ens 145 2 equivalent equivalent JJ cord-347472-n6811ens 145 3 to to IN cord-347472-n6811ens 145 4 one one CD cord-347472-n6811ens 145 5 diploid diploid JJ cord-347472-n6811ens 145 6 copy copy NN cord-347472-n6811ens 145 7 of of IN cord-347472-n6811ens 145 8 gDNA gdna NN cord-347472-n6811ens 145 9 per per IN cord-347472-n6811ens 145 10 reaction reaction NN cord-347472-n6811ens 145 11 ( ( -LRB- cord-347472-n6811ens 145 12 6.125pg 6.125pg CD cord-347472-n6811ens 145 13 ) ) -RRB- cord-347472-n6811ens 145 14 generates generate VBZ cord-347472-n6811ens 145 15 signals signal NNS cord-347472-n6811ens 145 16 well well RB cord-347472-n6811ens 145 17 above above IN cord-347472-n6811ens 145 18 the the DT cord-347472-n6811ens 145 19 CDC CDC NNP cord-347472-n6811ens 145 20 - - HYPH cord-347472-n6811ens 145 21 specified specify VBN cord-347472-n6811ens 145 22 threshold threshold NN cord-347472-n6811ens 145 23 , , , cord-347472-n6811ens 145 24 despite despite IN cord-347472-n6811ens 145 25 increase increase NN cord-347472-n6811ens 145 26 in in IN cord-347472-n6811ens 145 27 Ct Ct NNP cord-347472-n6811ens 145 28 variability variability NN cord-347472-n6811ens 145 29 at at IN cord-347472-n6811ens 145 30 extreme extreme JJ cord-347472-n6811ens 145 31 dilutions dilution NNS cord-347472-n6811ens 145 32 . . . cord-347472-n6811ens 146 1 Fig Fig NNP cord-347472-n6811ens 146 2 . . . cord-347472-n6811ens 147 1 3 3 LS cord-347472-n6811ens 147 2 . . . cord-347472-n6811ens 148 1 CDC CDC NNP cord-347472-n6811ens 148 2 - - HYPH cord-347472-n6811ens 148 3 specified specify VBN cord-347472-n6811ens 148 4 testing testing NN cord-347472-n6811ens 148 5 of of IN cord-347472-n6811ens 148 6 SARS SARS NNP cord-347472-n6811ens 148 7 - - HYPH cord-347472-n6811ens 148 8 CoV-2-positive cov-2-positive JJ cord-347472-n6811ens 148 9 clinical clinical JJ cord-347472-n6811ens 148 10 specimens specimen NNS cord-347472-n6811ens 148 11 return return VBP cord-347472-n6811ens 148 12 a a DT cord-347472-n6811ens 148 13 false false JJ cord-347472-n6811ens 148 14 negative negative JJ cord-347472-n6811ens 148 15 following following JJ cord-347472-n6811ens 148 16 loss loss NN cord-347472-n6811ens 148 17 of of IN cord-347472-n6811ens 148 18 RNA RNA NNP cord-347472-n6811ens 148 19 integrity integrity NN cord-347472-n6811ens 148 20 . . . cord-347472-n6811ens 149 1 Reverse reverse JJ cord-347472-n6811ens 149 2 - - HYPH cord-347472-n6811ens 149 3 transcriptase transcriptase NN cord-347472-n6811ens 149 4 - - HYPH cord-347472-n6811ens 149 5 qPCR qpcr NN cord-347472-n6811ens 149 6 data datum NNS cord-347472-n6811ens 149 7 were be VBD cord-347472-n6811ens 149 8 generated generate VBN cord-347472-n6811ens 149 9 using use VBG cord-347472-n6811ens 149 10 Viral Viral NNP cord-347472-n6811ens 149 11 One one CD cord-347472-n6811ens 149 12 - - HYPH cord-347472-n6811ens 149 13 step step NN cord-347472-n6811ens 149 14 RT RT NNP cord-347472-n6811ens 149 15 - - HYPH cord-347472-n6811ens 149 16 qPCR qPCR NNP cord-347472-n6811ens 149 17 mastermix mastermix NNP cord-347472-n6811ens 149 18 ( ( -LRB- cord-347472-n6811ens 149 19 Materials Materials NNPS cord-347472-n6811ens 149 20 and and CC cord-347472-n6811ens 149 21 Methods Methods NNPS cord-347472-n6811ens 149 22 ) ) -RRB- cord-347472-n6811ens 149 23 . . . cord-347472-n6811ens 150 1 Extracted extract VBN cord-347472-n6811ens 150 2 nucleic nucleic JJ cord-347472-n6811ens 150 3 acid acid NN cord-347472-n6811ens 150 4 samples sample NNS cord-347472-n6811ens 150 5 used use VBN cord-347472-n6811ens 150 6 in in IN cord-347472-n6811ens 150 7 Figure figure NN cord-347472-n6811ens 150 8 2 2 CD cord-347472-n6811ens 150 9 were be VBD cord-347472-n6811ens 150 10 pooled pool VBN cord-347472-n6811ens 150 11 , , , cord-347472-n6811ens 150 12 divided divide VBN cord-347472-n6811ens 150 13 into into IN cord-347472-n6811ens 150 14 aliquots aliquot NNS cord-347472-n6811ens 150 15 , , , cord-347472-n6811ens 150 16 and and CC cord-347472-n6811ens 150 17 treated treat VBN cord-347472-n6811ens 150 18 with with IN cord-347472-n6811ens 150 19 either either DT cord-347472-n6811ens 150 20 nuclease nuclease NN cord-347472-n6811ens 150 21 - - HYPH cord-347472-n6811ens 150 22 free free JJ cord-347472-n6811ens 150 23 water water NN cord-347472-n6811ens 150 24 or or CC cord-347472-n6811ens 150 25 Ribonuclease Ribonuclease NNP cord-347472-n6811ens 150 26 A A NNP cord-347472-n6811ens 150 27 ( ( -LRB- cord-347472-n6811ens 150 28 RNase RNase NNP cord-347472-n6811ens 150 29 A A NNP cord-347472-n6811ens 150 30 ) ) -RRB- cord-347472-n6811ens 150 31 . . . cord-347472-n6811ens 151 1 Commercial Commercial NNP cord-347472-n6811ens 151 2 RNA RNA NNP cord-347472-n6811ens 151 3 , , , cord-347472-n6811ens 151 4 DNA DNA NNP cord-347472-n6811ens 151 5 , , , cord-347472-n6811ens 151 6 and and CC cord-347472-n6811ens 151 7 no no DT cord-347472-n6811ens 151 8 - - HYPH cord-347472-n6811ens 151 9 template template NN cord-347472-n6811ens 151 10 controls control NNS cord-347472-n6811ens 151 11 ( ( -LRB- cord-347472-n6811ens 151 12 NTC NTC NNP cord-347472-n6811ens 151 13 ) ) -RRB- cord-347472-n6811ens 151 14 were be VBD cord-347472-n6811ens 151 15 treated treat VBN cord-347472-n6811ens 151 16 in in IN cord-347472-n6811ens 151 17 parallel parallel NN cord-347472-n6811ens 151 18 . . . cord-347472-n6811ens 152 1 Samples sample NNS cord-347472-n6811ens 152 2 were be VBD cord-347472-n6811ens 152 3 analyzed analyze VBN cord-347472-n6811ens 152 4 using use VBG cord-347472-n6811ens 152 5 the the DT cord-347472-n6811ens 152 6 Viral Viral NNP cord-347472-n6811ens 152 7 N1 N1 NNP cord-347472-n6811ens 152 8 , , , cord-347472-n6811ens 152 9 Viral Viral NNP cord-347472-n6811ens 152 10 N2 N2 NNP cord-347472-n6811ens 152 11 , , , cord-347472-n6811ens 152 12 and and CC cord-347472-n6811ens 152 13 CDC CDC NNP cord-347472-n6811ens 152 14 - - HYPH cord-347472-n6811ens 152 15 designed design VBN cord-347472-n6811ens 152 16 RP RP NNP cord-347472-n6811ens 152 17 control control NN cord-347472-n6811ens 152 18 primer primer NN cord-347472-n6811ens 152 19 / / SYM cord-347472-n6811ens 152 20 probe probe NN cord-347472-n6811ens 152 21 sets set NNS cord-347472-n6811ens 152 22 , , , cord-347472-n6811ens 152 23 and and CC cord-347472-n6811ens 152 24 a a DT cord-347472-n6811ens 152 25 transcript transcript NN cord-347472-n6811ens 152 26 - - HYPH cord-347472-n6811ens 152 27 specific specific JJ cord-347472-n6811ens 152 28 control control NN cord-347472-n6811ens 152 29 targeting target VBG cord-347472-n6811ens 152 30 exons exon NNS cord-347472-n6811ens 152 31 1 1 CD cord-347472-n6811ens 152 32 - - SYM cord-347472-n6811ens 152 33 3 3 CD cord-347472-n6811ens 152 34 of of IN cord-347472-n6811ens 152 35 RPP30 RPP30 NNP cord-347472-n6811ens 153 1 ( ( -LRB- cord-347472-n6811ens 153 2 Table table NN cord-347472-n6811ens 153 3 _SP cord-347472-n6811ens 153 4 S1 S1 NNP cord-347472-n6811ens 153 5 ) ) -RRB- cord-347472-n6811ens 153 6 . . . cord-347472-n6811ens 154 1 Correct correct JJ cord-347472-n6811ens 154 2 positive positive JJ cord-347472-n6811ens 154 3 viral viral JJ cord-347472-n6811ens 154 4 and and CC cord-347472-n6811ens 154 5 control control NN cord-347472-n6811ens 154 6 signals signal NNS cord-347472-n6811ens 154 7 are be VBP cord-347472-n6811ens 154 8 generated generate VBN cord-347472-n6811ens 154 9 from from IN cord-347472-n6811ens 154 10 each each DT cord-347472-n6811ens 154 11 infected infect VBN cord-347472-n6811ens 154 12 - - HYPH cord-347472-n6811ens 154 13 patient patient NN cord-347472-n6811ens 154 14 pool pool NN cord-347472-n6811ens 154 15 after after IN cord-347472-n6811ens 154 16 mock mock JJ cord-347472-n6811ens 154 17 treatment treatment NN cord-347472-n6811ens 154 18 ( ( -LRB- cord-347472-n6811ens 154 19 water water NN cord-347472-n6811ens 154 20 , , , cord-347472-n6811ens 154 21 left leave VBD cord-347472-n6811ens 154 22 ) ) -RRB- cord-347472-n6811ens 154 23 . . . cord-347472-n6811ens 155 1 Loss loss NN cord-347472-n6811ens 155 2 of of IN cord-347472-n6811ens 155 3 RNA RNA NNP cord-347472-n6811ens 155 4 integrity integrity NN cord-347472-n6811ens 155 5 causes cause VBZ cord-347472-n6811ens 155 6 clinical clinical JJ cord-347472-n6811ens 155 7 samples sample NNS cord-347472-n6811ens 155 8 to to TO cord-347472-n6811ens 155 9 return return VB cord-347472-n6811ens 155 10 negative negative JJ cord-347472-n6811ens 155 11 signals signal NNS cord-347472-n6811ens 155 12 from from IN cord-347472-n6811ens 155 13 both both DT cord-347472-n6811ens 155 14 viral viral JJ cord-347472-n6811ens 155 15 probes probe NNS cord-347472-n6811ens 155 16 , , , cord-347472-n6811ens 155 17 but but CC cord-347472-n6811ens 155 18 the the DT cord-347472-n6811ens 155 19 CDC CDC NNP cord-347472-n6811ens 155 20 - - HYPH cord-347472-n6811ens 155 21 specified specify VBN cord-347472-n6811ens 155 22 RP RP NNP cord-347472-n6811ens 155 23 control control NN cord-347472-n6811ens 155 24 due due JJ cord-347472-n6811ens 155 25 to to IN cord-347472-n6811ens 155 26 DNA dna NN cord-347472-n6811ens 155 27 - - HYPH cord-347472-n6811ens 155 28 templated templated JJ cord-347472-n6811ens 155 29 amplification amplification NN cord-347472-n6811ens 155 30 ( ( -LRB- cord-347472-n6811ens 155 31 RNase rnase NN cord-347472-n6811ens 155 32 , , , cord-347472-n6811ens 155 33 right right JJ cord-347472-n6811ens 155 34 ) ) -RRB- cord-347472-n6811ens 155 35 . . . cord-347472-n6811ens 156 1 A a DT cord-347472-n6811ens 156 2 transcript transcript NN cord-347472-n6811ens 156 3 - - HYPH cord-347472-n6811ens 156 4 specific specific JJ cord-347472-n6811ens 156 5 RP RP NNP cord-347472-n6811ens 156 6 control control NN cord-347472-n6811ens 156 7 accurately accurately RB cord-347472-n6811ens 156 8 informs inform VBZ cord-347472-n6811ens 156 9 as as IN cord-347472-n6811ens 156 10 to to IN cord-347472-n6811ens 156 11 loss loss NN cord-347472-n6811ens 156 12 of of IN cord-347472-n6811ens 156 13 sample sample NN cord-347472-n6811ens 156 14 integrity integrity NN cord-347472-n6811ens 156 15 . . . cord-347472-n6811ens 157 1 As as IN cord-347472-n6811ens 157 2 desired desire VBN cord-347472-n6811ens 157 3 , , , cord-347472-n6811ens 157 4 samples sample NNS cord-347472-n6811ens 157 5 with with IN cord-347472-n6811ens 157 6 degraded degrade VBN cord-347472-n6811ens 157 7 RNA RNA NNP cord-347472-n6811ens 157 8 do do VBP cord-347472-n6811ens 157 9 not not RB cord-347472-n6811ens 157 10 generate generate VB cord-347472-n6811ens 157 11 an an DT cord-347472-n6811ens 157 12 extraction extraction NN cord-347472-n6811ens 157 13 control control NN cord-347472-n6811ens 157 14 signal signal NN cord-347472-n6811ens 157 15 from from IN cord-347472-n6811ens 157 16 a a DT cord-347472-n6811ens 157 17 transcript transcript NN cord-347472-n6811ens 157 18 - - HYPH cord-347472-n6811ens 157 19 specific specific JJ cord-347472-n6811ens 157 20 design design NN cord-347472-n6811ens 157 21 , , , cord-347472-n6811ens 157 22 marking mark VBG cord-347472-n6811ens 157 23 the the DT cord-347472-n6811ens 157 24 result result NN cord-347472-n6811ens 157 25 as as IN cord-347472-n6811ens 157 26 invalid invalid JJ cord-347472-n6811ens 157 27 , , , cord-347472-n6811ens 157 28 rather rather RB cord-347472-n6811ens 157 29 than than IN cord-347472-n6811ens 157 30 " " `` cord-347472-n6811ens 157 31 virus virus NN cord-347472-n6811ens 157 32 not not RB cord-347472-n6811ens 157 33 detected detect VBN cord-347472-n6811ens 157 34 " " '' cord-347472-n6811ens 157 35 . . . cord-347472-n6811ens 158 1 Horizontal Horizontal NNP cord-347472-n6811ens 158 2 dashed dash VBD cord-347472-n6811ens 158 3 lines line NNS cord-347472-n6811ens 158 4 reflect reflect VBP cord-347472-n6811ens 158 5 software software NN cord-347472-n6811ens 158 6 - - HYPH cord-347472-n6811ens 158 7 generated generate VBN cord-347472-n6811ens 158 8 Ct Ct NNP cord-347472-n6811ens 158 9 thresholds threshold NNS cord-347472-n6811ens 158 10 . . . cord-347472-n6811ens 159 1 Sample sample NN cord-347472-n6811ens 159 2 preparation preparation NN cord-347472-n6811ens 159 3 Fully fully RB cord-347472-n6811ens 159 4 de de JJ cord-347472-n6811ens 159 5 - - VBN cord-347472-n6811ens 159 6 identified identify VBN cord-347472-n6811ens 159 7 clinical clinical JJ cord-347472-n6811ens 159 8 " " `` cord-347472-n6811ens 159 9 RNA RNA NNP cord-347472-n6811ens 159 10 " " '' cord-347472-n6811ens 159 11 ( ( -LRB- cord-347472-n6811ens 159 12 more more RBR cord-347472-n6811ens 159 13 properly properly RB cord-347472-n6811ens 159 14 , , , cord-347472-n6811ens 159 15 total total JJ cord-347472-n6811ens 159 16 nucleic nucleic JJ cord-347472-n6811ens 159 17 acid acid NN cord-347472-n6811ens 159 18 ) ) -RRB- cord-347472-n6811ens 159 19 specimens specimen NNS cord-347472-n6811ens 159 20 , , , cord-347472-n6811ens 159 21 generated generate VBN cord-347472-n6811ens 159 22 in in IN cord-347472-n6811ens 159 23 excess excess NN cord-347472-n6811ens 159 24 during during IN cord-347472-n6811ens 159 25 testing testing NN cord-347472-n6811ens 159 26 of of IN cord-347472-n6811ens 159 27 SARS SARS NNP cord-347472-n6811ens 159 28 - - HYPH cord-347472-n6811ens 159 29 CoV-2 CoV-2 NNP cord-347472-n6811ens 159 30 RT RT NNP cord-347472-n6811ens 159 31 - - HYPH cord-347472-n6811ens 159 32 qPCR qpcr JJ cord-347472-n6811ens 159 33 - - HYPH cord-347472-n6811ens 159 34 positive positive JJ cord-347472-n6811ens 159 35 patients patient NNS cord-347472-n6811ens 159 36 , , , cord-347472-n6811ens 159 37 were be VBD cord-347472-n6811ens 159 38 provided provide VBN cord-347472-n6811ens 159 39 by by IN cord-347472-n6811ens 159 40 the the DT cord-347472-n6811ens 159 41 Stony Stony NNP cord-347472-n6811ens 159 42 Brook Brook NNP cord-347472-n6811ens 159 43 Hospital Hospital NNP cord-347472-n6811ens 159 44 Biobank Biobank NNP cord-347472-n6811ens 159 45 . . . cord-347472-n6811ens 160 1 Nucleic nucleic JJ cord-347472-n6811ens 160 2 acids acid NNS cord-347472-n6811ens 160 3 had have VBD cord-347472-n6811ens 160 4 been be VBN cord-347472-n6811ens 160 5 previously previously RB cord-347472-n6811ens 160 6 purified purify VBN cord-347472-n6811ens 160 7 from from IN cord-347472-n6811ens 160 8 polyester polyester NN cord-347472-n6811ens 160 9 - - HYPH cord-347472-n6811ens 160 10 tipped tip VBN cord-347472-n6811ens 160 11 nasopharyngeal nasopharyngeal JJ cord-347472-n6811ens 160 12 swabs swab NNS cord-347472-n6811ens 160 13 desorbed desorb VBN cord-347472-n6811ens 160 14 in in IN cord-347472-n6811ens 160 15 viral viral JJ cord-347472-n6811ens 160 16 transport transport NN cord-347472-n6811ens 160 17 media medium NNS cord-347472-n6811ens 160 18 ( ( -LRB- cord-347472-n6811ens 160 19 VTM VTM NNP cord-347472-n6811ens 160 20 ) ) -RRB- cord-347472-n6811ens 160 21 and and CC cord-347472-n6811ens 160 22 processed process VBN cord-347472-n6811ens 160 23 in in IN cord-347472-n6811ens 160 24 a a DT cord-347472-n6811ens 160 25 CLIA CLIA NNP cord-347472-n6811ens 160 26 high high JJ cord-347472-n6811ens 160 27 complexity complexity NN cord-347472-n6811ens 160 28 pathology pathology NN cord-347472-n6811ens 160 29 laboratory laboratory NN cord-347472-n6811ens 160 30 . . . cord-347472-n6811ens 161 1 Briefly briefly RB cord-347472-n6811ens 161 2 , , , cord-347472-n6811ens 161 3 nucleic nucleic JJ cord-347472-n6811ens 161 4 acid acid NN cord-347472-n6811ens 161 5 was be VBD cord-347472-n6811ens 161 6 extracted extract VBN cord-347472-n6811ens 161 7 from from IN cord-347472-n6811ens 161 8 160µl 160µl JJ cord-347472-n6811ens 161 9 VTM VTM NNP cord-347472-n6811ens 161 10 using use VBG cord-347472-n6811ens 161 11 Qiagen Qiagen NNP cord-347472-n6811ens 161 12 QiaAMP QiaAMP VBZ cord-347472-n6811ens 161 13 DSP DSP NNP cord-347472-n6811ens 161 14 Viral Viral NNP cord-347472-n6811ens 161 15 Mini Mini NNP cord-347472-n6811ens 161 16 spin spin NN cord-347472-n6811ens 161 17 columns column NNS cord-347472-n6811ens 161 18 processed process VBN cord-347472-n6811ens 161 19 on on IN cord-347472-n6811ens 161 20 a a DT cord-347472-n6811ens 161 21 Qiacube Qiacube NNP cord-347472-n6811ens 161 22 automation automation NN cord-347472-n6811ens 161 23 system system NN cord-347472-n6811ens 161 24 as as IN cord-347472-n6811ens 161 25 per per IN cord-347472-n6811ens 161 26 vendor vendor NN cord-347472-n6811ens 161 27 instructions instruction NNS cord-347472-n6811ens 161 28 ( ( -LRB- cord-347472-n6811ens 161 29 Qiagen Qiagen NNP cord-347472-n6811ens 161 30 , , , cord-347472-n6811ens 161 31 BV BV NNP cord-347472-n6811ens 161 32 ) ) -RRB- cord-347472-n6811ens 161 33 or or CC cord-347472-n6811ens 161 34 from from IN cord-347472-n6811ens 161 35 200µl 200µl NNP cord-347472-n6811ens 161 36 VTM VTM NNP cord-347472-n6811ens 161 37 using use VBG cord-347472-n6811ens 161 38 manual manual JJ cord-347472-n6811ens 161 39 Trizol Trizol NNP cord-347472-n6811ens 161 40 - - HYPH cord-347472-n6811ens 161 41 mediated mediate VBN cord-347472-n6811ens 161 42 organic organic JJ cord-347472-n6811ens 161 43 extraction extraction NN cord-347472-n6811ens 161 44 ( ( -LRB- cord-347472-n6811ens 161 45 Life Life NNP cord-347472-n6811ens 161 46 Technologies Technologies NNPS cord-347472-n6811ens 161 47 ) ) -RRB- cord-347472-n6811ens 161 48 followed follow VBN cord-347472-n6811ens 161 49 by by IN cord-347472-n6811ens 161 50 alcohol alcohol NN cord-347472-n6811ens 161 51 precipitation precipitation NN cord-347472-n6811ens 161 52 ( ( -LRB- cord-347472-n6811ens 161 53 5 5 CD cord-347472-n6811ens 161 54 ) ) -RRB- cord-347472-n6811ens 161 55 . . . cord-347472-n6811ens 162 1 Samples sample NNS cord-347472-n6811ens 162 2 were be VBD cord-347472-n6811ens 162 3 eluted elute VBN cord-347472-n6811ens 162 4 in in IN cord-347472-n6811ens 162 5 50µl 50µl NN cord-347472-n6811ens 162 6 of of IN cord-347472-n6811ens 162 7 RNase rnase NN cord-347472-n6811ens 162 8 - - HYPH cord-347472-n6811ens 162 9 free free JJ cord-347472-n6811ens 162 10 water water NN cord-347472-n6811ens 162 11 supplemented supplement VBN cord-347472-n6811ens 162 12 with with IN cord-347472-n6811ens 162 13 0.04 0.04 CD cord-347472-n6811ens 162 14 % % NN cord-347472-n6811ens 162 15 NaN3 NaN3 NNP cord-347472-n6811ens 162 16 ( ( -LRB- cord-347472-n6811ens 162 17 Qiagen Qiagen NNP cord-347472-n6811ens 162 18 ) ) -RRB- cord-347472-n6811ens 162 19 or or CC cord-347472-n6811ens 162 20 resuspended resuspend VBD cord-347472-n6811ens 162 21 in in IN cord-347472-n6811ens 162 22 RNase rnase NN cord-347472-n6811ens 162 23 - - HYPH cord-347472-n6811ens 162 24 free free JJ cord-347472-n6811ens 162 25 water water NN cord-347472-n6811ens 162 26 ( ( -LRB- cord-347472-n6811ens 162 27 Trizol Trizol NNP cord-347472-n6811ens 162 28 ) ) -RRB- cord-347472-n6811ens 162 29 and and CC cord-347472-n6811ens 162 30 stored store VBN cord-347472-n6811ens 162 31 at at IN cord-347472-n6811ens 162 32 -80C -80C NNP cord-347472-n6811ens 162 33 until until IN cord-347472-n6811ens 162 34 use use NN cord-347472-n6811ens 162 35 . . . cord-347472-n6811ens 163 1 Commercial Commercial NNP cord-347472-n6811ens 163 2 pooled pool VBN cord-347472-n6811ens 163 3 RNA RNA NNP cord-347472-n6811ens 163 4 ( ( -LRB- cord-347472-n6811ens 163 5 Quantigene Quantigene NNP cord-347472-n6811ens 163 6 Human Human NNP cord-347472-n6811ens 163 7 Reference Reference NNP cord-347472-n6811ens 163 8 , , , cord-347472-n6811ens 163 9 QS0639 qs0639 JJ cord-347472-n6811ens 163 10 , , , cord-347472-n6811ens 163 11 Life Life NNP cord-347472-n6811ens 163 12 Technologies Technologies NNPS cord-347472-n6811ens 163 13 ) ) -RRB- cord-347472-n6811ens 163 14 and and CC cord-347472-n6811ens 163 15 pooled pool VBN cord-347472-n6811ens 163 16 human human JJ cord-347472-n6811ens 163 17 male male JJ cord-347472-n6811ens 163 18 DNA dna NN cord-347472-n6811ens 163 19 ( ( -LRB- cord-347472-n6811ens 163 20 G3041 G3041 NNP cord-347472-n6811ens 163 21 , , , cord-347472-n6811ens 163 22 Promega Promega NNP cord-347472-n6811ens 163 23 and and CC cord-347472-n6811ens 163 24 4312660 4312660 CD cord-347472-n6811ens 163 25 , , , cord-347472-n6811ens 163 26 Life Life NNP cord-347472-n6811ens 163 27 Technologies Technologies NNPS cord-347472-n6811ens 163 28 ) ) -RRB- cord-347472-n6811ens 163 29 were be VBD cord-347472-n6811ens 163 30 used use VBN cord-347472-n6811ens 163 31 to to TO cord-347472-n6811ens 163 32 generate generate VB cord-347472-n6811ens 163 33 calibration calibration NN cord-347472-n6811ens 163 34 curves curve NNS cord-347472-n6811ens 163 35 and and CC cord-347472-n6811ens 163 36 serve serve VBP cord-347472-n6811ens 163 37 as as IN cord-347472-n6811ens 163 38 reaction reaction NN cord-347472-n6811ens 163 39 controls control NNS cord-347472-n6811ens 163 40 . . . cord-347472-n6811ens 164 1 DNA dna NN cord-347472-n6811ens 164 2 samples sample NNS cord-347472-n6811ens 164 3 were be VBD cord-347472-n6811ens 164 4 diluted dilute VBN cord-347472-n6811ens 164 5 in in IN cord-347472-n6811ens 164 6 nuclease nuclease DT cord-347472-n6811ens 164 7 free free JJ cord-347472-n6811ens 164 8 water water NN cord-347472-n6811ens 164 9 supplemented supplement VBN cord-347472-n6811ens 164 10 with with IN cord-347472-n6811ens 164 11 0.01 0.01 CD cord-347472-n6811ens 164 12 % % NN cord-347472-n6811ens 165 1 Tween-20 Tween-20 NNP cord-347472-n6811ens 165 2 , , , cord-347472-n6811ens 165 3 RNA RNA NNP cord-347472-n6811ens 165 4 samples sample NNS cord-347472-n6811ens 165 5 were be VBD cord-347472-n6811ens 165 6 diluted dilute VBN cord-347472-n6811ens 165 7 in in IN cord-347472-n6811ens 165 8 nuclease nuclease NN cord-347472-n6811ens 165 9 - - HYPH cord-347472-n6811ens 165 10 free free JJ cord-347472-n6811ens 165 11 water water NN cord-347472-n6811ens 165 12 . . . cord-347472-n6811ens 166 1 Low low JJ cord-347472-n6811ens 166 2 binding bind VBG cord-347472-n6811ens 166 3 filter filter NN cord-347472-n6811ens 166 4 tips tip NNS cord-347472-n6811ens 166 5 were be VBD cord-347472-n6811ens 166 6 used use VBN cord-347472-n6811ens 166 7 for for IN cord-347472-n6811ens 166 8 all all DT cord-347472-n6811ens 166 9 liquid liquid JJ cord-347472-n6811ens 166 10 handling handling NN cord-347472-n6811ens 166 11 . . . cord-347472-n6811ens 167 1 PCR PCR NNP cord-347472-n6811ens 167 2 primer primer NN cord-347472-n6811ens 167 3 and and CC cord-347472-n6811ens 167 4 probe probe NN cord-347472-n6811ens 167 5 design design NN cord-347472-n6811ens 167 6 qPCR qpcr NN cord-347472-n6811ens 167 7 primers primer NNS cord-347472-n6811ens 167 8 and and CC cord-347472-n6811ens 167 9 hydrolysis hydrolysis NN cord-347472-n6811ens 167 10 ( ( -LRB- cord-347472-n6811ens 167 11 " " `` cord-347472-n6811ens 167 12 TaqMan TaqMan NNP cord-347472-n6811ens 167 13 " " '' cord-347472-n6811ens 167 14 ) ) -RRB- cord-347472-n6811ens 167 15 probes probe NNS cord-347472-n6811ens 167 16 were be VBD cord-347472-n6811ens 167 17 used use VBN cord-347472-n6811ens 167 18 for for IN cord-347472-n6811ens 167 19 real real JJ cord-347472-n6811ens 167 20 - - HYPH cord-347472-n6811ens 167 21 time time NN cord-347472-n6811ens 167 22 detection detection NN cord-347472-n6811ens 167 23 . . . cord-347472-n6811ens 168 1 CDC CDC NNP cord-347472-n6811ens 168 2 - - HYPH cord-347472-n6811ens 168 3 specified specify VBN cord-347472-n6811ens 168 4 RnaseP RnaseP NNS cord-347472-n6811ens 168 5 ( ( -LRB- cord-347472-n6811ens 168 6 RP RP NNP cord-347472-n6811ens 168 7 ) ) -RRB- cord-347472-n6811ens 168 8 and and CC cord-347472-n6811ens 168 9 SARS SARS NNP cord-347472-n6811ens 168 10 - - HYPH cord-347472-n6811ens 168 11 CoV-2 CoV-2 NNP cord-347472-n6811ens 168 12 ( ( -LRB- cord-347472-n6811ens 168 13 N1 N1 NNP cord-347472-n6811ens 168 14 and and CC cord-347472-n6811ens 168 15 N2 N2 NNP cord-347472-n6811ens 168 16 ) ) -RRB- cord-347472-n6811ens 168 17 probes probe NNS cord-347472-n6811ens 168 18 were be VBD cord-347472-n6811ens 168 19 purchased purchase VBN cord-347472-n6811ens 168 20 from from IN cord-347472-n6811ens 168 21 Integrated Integrated NNP cord-347472-n6811ens 168 22 DNA DNA NNP cord-347472-n6811ens 168 23 Technologies Technologies NNP cord-347472-n6811ens 168 24 ( ( -LRB- cord-347472-n6811ens 168 25 RUO RUO NNP cord-347472-n6811ens 168 26 qualified qualify VBD cord-347472-n6811ens 168 27 , , , cord-347472-n6811ens 168 28 10006713 10006713 CD cord-347472-n6811ens 168 29 ; ; : cord-347472-n6811ens 168 30 to to TO cord-347472-n6811ens 168 31 conserve conserve VB cord-347472-n6811ens 168 32 clinically clinically RB cord-347472-n6811ens 168 33 certified certify VBN cord-347472-n6811ens 168 34 reagents reagent NNS cord-347472-n6811ens 168 35 , , , cord-347472-n6811ens 168 36 research research NN cord-347472-n6811ens 168 37 grade grade NN cord-347472-n6811ens 168 38 primers primer NNS cord-347472-n6811ens 168 39 of of IN cord-347472-n6811ens 168 40 identical identical JJ cord-347472-n6811ens 168 41 composition composition NN cord-347472-n6811ens 168 42 were be VBD cord-347472-n6811ens 168 43 used use VBN cord-347472-n6811ens 168 44 ) ) -RRB- cord-347472-n6811ens 168 45 . . . cord-347472-n6811ens 169 1 CDC CDC NNP cord-347472-n6811ens 169 2 primers primer NNS cord-347472-n6811ens 169 3 were be VBD cord-347472-n6811ens 169 4 used use VBN cord-347472-n6811ens 169 5 as as IN cord-347472-n6811ens 169 6 specified specify VBN cord-347472-n6811ens 169 7 in in IN cord-347472-n6811ens 169 8 the the DT cord-347472-n6811ens 169 9 EUA EUA NNP cord-347472-n6811ens 169 10 A A NNP cord-347472-n6811ens 169 11 total total NN cord-347472-n6811ens 169 12 of of IN cord-347472-n6811ens 169 13 five five CD cord-347472-n6811ens 169 14 RPP30 rpp30 IN cord-347472-n6811ens 169 15 probe probe NN cord-347472-n6811ens 169 16 set set VBN cord-347472-n6811ens 169 17 designs design NNS cord-347472-n6811ens 169 18 from from IN cord-347472-n6811ens 169 19 multiple multiple JJ cord-347472-n6811ens 169 20 vendors vendor NNS cord-347472-n6811ens 169 21 were be VBD cord-347472-n6811ens 169 22 ordered order VBN cord-347472-n6811ens 169 23 and and CC cord-347472-n6811ens 169 24 empirically empirically RB cord-347472-n6811ens 169 25 tested test VBN cord-347472-n6811ens 169 26 ( ( -LRB- cord-347472-n6811ens 169 27 Table Table NNP cord-347472-n6811ens 169 28 S1 S1 NNP cord-347472-n6811ens 169 29 ) ) -RRB- cord-347472-n6811ens 169 30 . . . cord-347472-n6811ens 170 1 These these DT cord-347472-n6811ens 170 2 include include VBP cord-347472-n6811ens 170 3 probes probe NNS cord-347472-n6811ens 170 4 targeting target VBG cord-347472-n6811ens 170 5 exon exon NN cord-347472-n6811ens 170 6 - - HYPH cord-347472-n6811ens 170 7 exon exon NN cord-347472-n6811ens 170 8 junctions junction NNS cord-347472-n6811ens 170 9 and and CC cord-347472-n6811ens 170 10 a a DT cord-347472-n6811ens 170 11 minor minor JJ cord-347472-n6811ens 170 12 - - HYPH cord-347472-n6811ens 170 13 groove groove NN cord-347472-n6811ens 170 14 - - HYPH cord-347472-n6811ens 170 15 binding bind VBG cord-347472-n6811ens 170 16 TaqMan TaqMan NNP cord-347472-n6811ens 170 17 probe probe NN cord-347472-n6811ens 170 18 ( ( -LRB- cord-347472-n6811ens 170 19 Life Life NNP cord-347472-n6811ens 170 20 Technologies Technologies NNPS cord-347472-n6811ens 170 21 ) ) -RRB- cord-347472-n6811ens 170 22 . . . cord-347472-n6811ens 171 1 The the DT cord-347472-n6811ens 171 2 best good JJS cord-347472-n6811ens 171 3 performing perform VBG cord-347472-n6811ens 171 4 design design NN cord-347472-n6811ens 171 5 , , , cord-347472-n6811ens 171 6 generating generate VBG cord-347472-n6811ens 171 7 an an DT cord-347472-n6811ens 171 8 amplicon amplicon NN cord-347472-n6811ens 171 9 across across IN cord-347472-n6811ens 171 10 exons exon NNS cord-347472-n6811ens 171 11 1 1 CD cord-347472-n6811ens 171 12 - - SYM cord-347472-n6811ens 171 13 3 3 CD cord-347472-n6811ens 171 14 with with IN cord-347472-n6811ens 171 15 an an DT cord-347472-n6811ens 171 16 exon exon NN cord-347472-n6811ens 171 17 - - HYPH cord-347472-n6811ens 171 18 exon exon JJ cord-347472-n6811ens 171 19 junctionspanning junctionspanning NN cord-347472-n6811ens 171 20 probe probe NN cord-347472-n6811ens 171 21 , , , cord-347472-n6811ens 171 22 was be VBD cord-347472-n6811ens 171 23 ordered order VBN cord-347472-n6811ens 171 24 with with IN cord-347472-n6811ens 171 25 a a DT cord-347472-n6811ens 171 26 5 5 CD cord-347472-n6811ens 171 27 ' ' CD cord-347472-n6811ens 171 28 6-carboxyfluoroscein 6-carboxyfluoroscein CD cord-347472-n6811ens 171 29 , , , cord-347472-n6811ens 171 30 3-BHQ 3-bhq CD cord-347472-n6811ens 171 31 and and CC cord-347472-n6811ens 171 32 internally internally RB cord-347472-n6811ens 171 33 - - HYPH cord-347472-n6811ens 171 34 quenched quench VBN cord-347472-n6811ens 171 35 probe probe NN cord-347472-n6811ens 171 36 from from IN cord-347472-n6811ens 171 37 IDT IDT NNP cord-347472-n6811ens 171 38 as as IN cord-347472-n6811ens 171 39 Assay Assay NNP cord-347472-n6811ens 171 40 Hs Hs NNP cord-347472-n6811ens 171 41 . . . cord-347472-n6811ens 172 1 PT.58.2854947 PT.58.2854947 NNP cord-347472-n6811ens 172 2 . . . cord-347472-n6811ens 173 1 This this DT cord-347472-n6811ens 173 2 design design NN cord-347472-n6811ens 173 3 had have VBD cord-347472-n6811ens 173 4 the the DT cord-347472-n6811ens 173 5 highest high JJS cord-347472-n6811ens 173 6 sensitivity sensitivity NN cord-347472-n6811ens 173 7 ( ( -LRB- cord-347472-n6811ens 173 8 as as IN cord-347472-n6811ens 173 9 lowest low JJS cord-347472-n6811ens 173 10 Ct Ct NNP cord-347472-n6811ens 173 11 ) ) -RRB- cord-347472-n6811ens 173 12 , , , cord-347472-n6811ens 173 13 highest high JJS cord-347472-n6811ens 173 14 efficiency efficiency NN cord-347472-n6811ens 173 15 , , , cord-347472-n6811ens 173 16 and and CC cord-347472-n6811ens 173 17 best well RBS cord-347472-n6811ens 173 18 consistent consistent JJ cord-347472-n6811ens 173 19 terminal terminal JJ cord-347472-n6811ens 173 20 signal signal NN cord-347472-n6811ens 173 21 characteristics characteristic NNS cord-347472-n6811ens 173 22 of of IN cord-347472-n6811ens 173 23 all all DT cord-347472-n6811ens 173 24 candidate candidate NN cord-347472-n6811ens 173 25 probes probe NNS cord-347472-n6811ens 173 26 tested test VBD cord-347472-n6811ens 173 27 ( ( -LRB- cord-347472-n6811ens 173 28 Supplementary Supplementary NNP cord-347472-n6811ens 173 29 Figure Figure NNP cord-347472-n6811ens 173 30 S1a S1a NNP cord-347472-n6811ens 173 31 ) ) -RRB- cord-347472-n6811ens 173 32 . . . cord-347472-n6811ens 174 1 All all DT cord-347472-n6811ens 174 2 non non JJ cord-347472-n6811ens 174 3 - - JJ cord-347472-n6811ens 174 4 CDC CDC NNP cord-347472-n6811ens 174 5 primer primer NN cord-347472-n6811ens 174 6 / / SYM cord-347472-n6811ens 174 7 probes probe NNS cord-347472-n6811ens 174 8 were be VBD cord-347472-n6811ens 174 9 used use VBN cord-347472-n6811ens 174 10 at at IN cord-347472-n6811ens 174 11 10 10 CD cord-347472-n6811ens 174 12 pmole pmole NNP cord-347472-n6811ens 174 13 primer/5 primer/5 FW cord-347472-n6811ens 174 14 pmole pmole NNP cord-347472-n6811ens 174 15 probe probe NN cord-347472-n6811ens 174 16 per per IN cord-347472-n6811ens 174 17 20µl 20µl JJ cord-347472-n6811ens 174 18 reaction reaction NN cord-347472-n6811ens 174 19 . . . cord-347472-n6811ens 175 1 qPCR qPCR NNP cord-347472-n6811ens 175 2 reaction reaction NN cord-347472-n6811ens 175 3 conditions condition NNS cord-347472-n6811ens 175 4 Reverse reverse VBP cord-347472-n6811ens 175 5 transcription transcription NN cord-347472-n6811ens 175 6 coupled couple VBN cord-347472-n6811ens 175 7 qPCR qPCR NNP cord-347472-n6811ens 175 8 was be VBD cord-347472-n6811ens 175 9 carried carry VBN cord-347472-n6811ens 175 10 out out RP cord-347472-n6811ens 175 11 essentially essentially RB cord-347472-n6811ens 175 12 as as IN cord-347472-n6811ens 175 13 described describe VBN cord-347472-n6811ens 175 14 in in IN cord-347472-n6811ens 175 15 the the DT cord-347472-n6811ens 175 16 CDC CDC NNP cord-347472-n6811ens 175 17 EUA EUA NNP cord-347472-n6811ens 175 18 for for IN cord-347472-n6811ens 175 19 COVID-19 COVID-19 NNP cord-347472-n6811ens 175 20 testing testing NN cord-347472-n6811ens 175 21 ( ( -LRB- cord-347472-n6811ens 175 22 2 2 LS cord-347472-n6811ens 175 23 ) ) -RRB- cord-347472-n6811ens 175 24 with with IN cord-347472-n6811ens 175 25 the the DT cord-347472-n6811ens 175 26 following following JJ cord-347472-n6811ens 175 27 modifications modification NNS cord-347472-n6811ens 175 28 . . . cord-347472-n6811ens 176 1 To to TO cord-347472-n6811ens 176 2 conserve conserve VB cord-347472-n6811ens 176 3 supplies supply NNS cord-347472-n6811ens 176 4 for for IN cord-347472-n6811ens 176 5 clinical clinical JJ cord-347472-n6811ens 176 6 use use NN cord-347472-n6811ens 176 7 , , , cord-347472-n6811ens 176 8 comparable comparable JJ cord-347472-n6811ens 176 9 research research NN cord-347472-n6811ens 176 10 - - HYPH cord-347472-n6811ens 176 11 grade grade NN cord-347472-n6811ens 176 12 reagents reagent NNS cord-347472-n6811ens 176 13 were be VBD cord-347472-n6811ens 176 14 used use VBN cord-347472-n6811ens 176 15 where where WRB cord-347472-n6811ens 176 16 possible possible JJ cord-347472-n6811ens 176 17 . . . cord-347472-n6811ens 177 1 TaqMan TaqMan NNP cord-347472-n6811ens 178 1 ™ ™ `` cord-347472-n6811ens 178 2 Fast fast JJ cord-347472-n6811ens 178 3 Virus Virus NNP cord-347472-n6811ens 178 4 1-Step 1-step CD cord-347472-n6811ens 178 5 Master Master NNP cord-347472-n6811ens 178 6 Mix Mix NNP cord-347472-n6811ens 178 7 ( ( -LRB- cord-347472-n6811ens 178 8 4444432 4444432 CD cord-347472-n6811ens 178 9 , , , cord-347472-n6811ens 178 10 Life Life NNP cord-347472-n6811ens 178 11 Technologies Technologies NNPS cord-347472-n6811ens 178 12 ) ) -RRB- cord-347472-n6811ens 178 13 was be VBD cord-347472-n6811ens 178 14 used use VBN cord-347472-n6811ens 178 15 for for IN cord-347472-n6811ens 178 16 one one CD cord-347472-n6811ens 178 17 - - HYPH cord-347472-n6811ens 178 18 step step NN cord-347472-n6811ens 178 19 RT rt NN cord-347472-n6811ens 178 20 - - HYPH cord-347472-n6811ens 178 21 qPCR qPCR NNP cord-347472-n6811ens 178 22 and and CC cord-347472-n6811ens 178 23 TaqMan TaqMan NNP cord-347472-n6811ens 178 24 Fast Fast NNP cord-347472-n6811ens 178 25 Advanced Advanced NNP cord-347472-n6811ens 178 26 Master Master NNP cord-347472-n6811ens 178 27 Mix Mix NNP cord-347472-n6811ens 178 28 ( ( -LRB- cord-347472-n6811ens 178 29 4444556 4444556 CD cord-347472-n6811ens 178 30 , , , cord-347472-n6811ens 178 31 Life Life NNP cord-347472-n6811ens 178 32 Technologies Technologies NNPS cord-347472-n6811ens 178 33 ) ) -RRB- cord-347472-n6811ens 178 34 was be VBD cord-347472-n6811ens 178 35 used use VBN cord-347472-n6811ens 178 36 for for IN cord-347472-n6811ens 178 37 non non JJ cord-347472-n6811ens 178 38 - - JJ cord-347472-n6811ens 178 39 reverse reverse JJ cord-347472-n6811ens 178 40 transcriptase transcriptase NN cord-347472-n6811ens 178 41 reactions reaction NNS cord-347472-n6811ens 178 42 . . . cord-347472-n6811ens 179 1 Real real JJ cord-347472-n6811ens 179 2 - - HYPH cord-347472-n6811ens 179 3 time time NN cord-347472-n6811ens 179 4 data datum NNS cord-347472-n6811ens 179 5 were be VBD cord-347472-n6811ens 179 6 collected collect VBN cord-347472-n6811ens 179 7 on on IN cord-347472-n6811ens 179 8 a a DT cord-347472-n6811ens 179 9 validated validate VBN cord-347472-n6811ens 179 10 ViiA7 ViiA7 NNP cord-347472-n6811ens 179 11 qPCR qpcr NN cord-347472-n6811ens 179 12 instrument instrument NN cord-347472-n6811ens 179 13 using use VBG cord-347472-n6811ens 179 14 a a DT cord-347472-n6811ens 179 15 384w 384w CD cord-347472-n6811ens 179 16 block block NN cord-347472-n6811ens 179 17 and and CC cord-347472-n6811ens 179 18 vendor vendor NN cord-347472-n6811ens 179 19 plates plate NNS cord-347472-n6811ens 179 20 and and CC cord-347472-n6811ens 179 21 seals seal NNS cord-347472-n6811ens 179 22 . . . cord-347472-n6811ens 180 1 All all DT cord-347472-n6811ens 180 2 runs run NNS cord-347472-n6811ens 180 3 were be VBD cord-347472-n6811ens 180 4 performed perform VBN cord-347472-n6811ens 180 5 using use VBG cord-347472-n6811ens 180 6 CDC CDC NNP cord-347472-n6811ens 180 7 - - HYPH cord-347472-n6811ens 180 8 specified specify VBN cord-347472-n6811ens 180 9 thermal thermal JJ cord-347472-n6811ens 180 10 cycling cycling NN cord-347472-n6811ens 180 11 parameters parameter NNS cord-347472-n6811ens 180 12 as as IN cord-347472-n6811ens 180 13 per per IN cord-347472-n6811ens 180 14 the the DT cord-347472-n6811ens 180 15 EUA EUA NNP cord-347472-n6811ens 180 16 . . . cord-347472-n6811ens 181 1 Automatic automatic JJ cord-347472-n6811ens 181 2 baselining baselining NN cord-347472-n6811ens 181 3 and and CC cord-347472-n6811ens 181 4 thresholding thresholding NN cord-347472-n6811ens 181 5 of of IN cord-347472-n6811ens 181 6 raw raw JJ cord-347472-n6811ens 181 7 qPCR qPCR NNP cord-347472-n6811ens 181 8 data datum NNS cord-347472-n6811ens 181 9 was be VBD cord-347472-n6811ens 181 10 performed perform VBN cord-347472-n6811ens 181 11 using use VBG cord-347472-n6811ens 181 12 vendor vendor NN cord-347472-n6811ens 181 13 software software NN cord-347472-n6811ens 181 14 ( ( -LRB- cord-347472-n6811ens 181 15 QuantStudio QuantStudio NNP cord-347472-n6811ens 181 16 1.3 1.3 CD cord-347472-n6811ens 181 17 , , , cord-347472-n6811ens 181 18 Life Life NNP cord-347472-n6811ens 181 19 Technologies Technologies NNPS cord-347472-n6811ens 181 20 ) ) -RRB- cord-347472-n6811ens 181 21 . . . cord-347472-n6811ens 182 1 Efficiency efficiency NN cord-347472-n6811ens 182 2 of of IN cord-347472-n6811ens 182 3 all all DT cord-347472-n6811ens 182 4 qPCR qpcr NN cord-347472-n6811ens 182 5 probes probe NNS cord-347472-n6811ens 182 6 was be VBD cord-347472-n6811ens 182 7 tested test VBN cord-347472-n6811ens 182 8 by by IN cord-347472-n6811ens 182 9 using use VBG cord-347472-n6811ens 182 10 a a DT cord-347472-n6811ens 182 11 simplex simplex JJ cord-347472-n6811ens 182 12 2-fold 2-fold CD cord-347472-n6811ens 182 13 serial serial JJ cord-347472-n6811ens 182 14 dilution dilution NN cord-347472-n6811ens 182 15 of of IN cord-347472-n6811ens 182 16 Quantigene Quantigene NNP cord-347472-n6811ens 182 17 commercial commercial JJ cord-347472-n6811ens 182 18 reference reference NN cord-347472-n6811ens 182 19 human human NN cord-347472-n6811ens 182 20 RNA RNA NNP cord-347472-n6811ens 182 21 ( ( -LRB- cord-347472-n6811ens 182 22 Invitrogen Invitrogen NNP cord-347472-n6811ens 182 23 ) ) -RRB- cord-347472-n6811ens 182 24 or or CC cord-347472-n6811ens 182 25 DNA DNA NNP cord-347472-n6811ens 182 26 ( ( -LRB- cord-347472-n6811ens 182 27 Promega Promega NNP cord-347472-n6811ens 182 28 ) ) -RRB- cord-347472-n6811ens 182 29 ranging range VBG cord-347472-n6811ens 182 30 from from IN cord-347472-n6811ens 182 31 64.2ng 64.2ng NNP cord-347472-n6811ens 182 32 to to IN cord-347472-n6811ens 182 33 62.7pg 62.7pg CD cord-347472-n6811ens 182 34 per per IN cord-347472-n6811ens 182 35 reaction reaction NN cord-347472-n6811ens 182 36 using use VBG cord-347472-n6811ens 182 37 Virus Virus NNP cord-347472-n6811ens 182 38 Onestep Onestep NNP cord-347472-n6811ens 182 39 Mastermix Mastermix NNP cord-347472-n6811ens 182 40 and and CC cord-347472-n6811ens 182 41 Taqman Taqman NNP cord-347472-n6811ens 182 42 Fast Fast NNP cord-347472-n6811ens 182 43 Mastermix Mastermix NNP cord-347472-n6811ens 182 44 . . . cord-347472-n6811ens 183 1 To to TO cord-347472-n6811ens 183 2 robustly robustly RB cord-347472-n6811ens 183 3 determine determine VB cord-347472-n6811ens 183 4 CDC CDC NNP cord-347472-n6811ens 183 5 - - HYPH cord-347472-n6811ens 183 6 RP RP NNP cord-347472-n6811ens 183 7 response response NN cord-347472-n6811ens 183 8 to to IN cord-347472-n6811ens 183 9 genomic genomic JJ cord-347472-n6811ens 183 10 DNA dna NN cord-347472-n6811ens 183 11 , , , cord-347472-n6811ens 183 12 four four CD cord-347472-n6811ens 183 13 completely completely RB cord-347472-n6811ens 183 14 independent independent JJ cord-347472-n6811ens 183 15 dilutions dilution NNS cord-347472-n6811ens 183 16 of of IN cord-347472-n6811ens 183 17 genomic genomic JJ cord-347472-n6811ens 183 18 DNA dna NN cord-347472-n6811ens 183 19 were be VBD cord-347472-n6811ens 183 20 performed perform VBN cord-347472-n6811ens 183 21 down down RP cord-347472-n6811ens 183 22 to to IN cord-347472-n6811ens 183 23 7.8pg 7.8pg CD cord-347472-n6811ens 183 24 / / SYM cord-347472-n6811ens 183 25 reaction reaction NN cord-347472-n6811ens 183 26 and and CC cord-347472-n6811ens 183 27 analyzed analyze VBD cord-347472-n6811ens 183 28 using use VBG cord-347472-n6811ens 183 29 Virus Virus NNP cord-347472-n6811ens 183 30 One one CD cord-347472-n6811ens 183 31 - - HYPH cord-347472-n6811ens 183 32 Step Step NNP cord-347472-n6811ens 183 33 Mastermix Mastermix NNP cord-347472-n6811ens 183 34 . . . cord-347472-n6811ens 184 1 Sample sample JJ cord-347472-n6811ens 184 2 pooling pooling NN cord-347472-n6811ens 184 3 and and CC cord-347472-n6811ens 184 4 RNAse RNAse NNP cord-347472-n6811ens 184 5 treatment treatment NN cord-347472-n6811ens 184 6 Limited limited JJ cord-347472-n6811ens 184 7 - - HYPH cord-347472-n6811ens 184 8 volume volume NN cord-347472-n6811ens 184 9 clinical clinical JJ cord-347472-n6811ens 184 10 samples sample NNS cord-347472-n6811ens 184 11 were be VBD cord-347472-n6811ens 184 12 pooled pool VBN cord-347472-n6811ens 184 13 to to TO cord-347472-n6811ens 184 14 generate generate VB cord-347472-n6811ens 184 15 sufficient sufficient JJ cord-347472-n6811ens 184 16 material material NN cord-347472-n6811ens 184 17 for for IN cord-347472-n6811ens 184 18 the the DT cord-347472-n6811ens 184 19 RNase rnase NN cord-347472-n6811ens 184 20 - - HYPH cord-347472-n6811ens 184 21 exposure exposure NN cord-347472-n6811ens 184 22 experiment experiment NN cord-347472-n6811ens 184 23 . . . cord-347472-n6811ens 185 1 A a DT cord-347472-n6811ens 185 2 total total NN cord-347472-n6811ens 185 3 of of IN cord-347472-n6811ens 185 4 28 28 CD cord-347472-n6811ens 185 5 clinical clinical JJ cord-347472-n6811ens 185 6 RNA RNA NNP cord-347472-n6811ens 185 7 samples sample NNS cord-347472-n6811ens 185 8 were be VBD cord-347472-n6811ens 185 9 pooled pool VBN cord-347472-n6811ens 185 10 , , , cord-347472-n6811ens 185 11 fourteen fourteen CD cord-347472-n6811ens 185 12 each each DT cord-347472-n6811ens 185 13 purified purify VBN cord-347472-n6811ens 185 14 by by IN cord-347472-n6811ens 185 15 Qiagen Qiagen NNP cord-347472-n6811ens 185 16 and and CC cord-347472-n6811ens 185 17 Trizol Trizol NNP cord-347472-n6811ens 185 18 ( ( -LRB- cord-347472-n6811ens 185 19 above above RB cord-347472-n6811ens 185 20 , , , cord-347472-n6811ens 185 21 Sample sample JJ cord-347472-n6811ens 185 22 preparation preparation NN cord-347472-n6811ens 185 23 ) ) -RRB- cord-347472-n6811ens 185 24 . . . cord-347472-n6811ens 186 1 Three three CD cord-347472-n6811ens 186 2 pools pool NNS cord-347472-n6811ens 186 3 were be VBD cord-347472-n6811ens 186 4 generated generate VBN cord-347472-n6811ens 186 5 for for IN cord-347472-n6811ens 186 6 each each DT cord-347472-n6811ens 186 7 technology technology NN cord-347472-n6811ens 186 8 , , , cord-347472-n6811ens 186 9 containing contain VBG cord-347472-n6811ens 186 10 5 5 CD cord-347472-n6811ens 186 11 , , , cord-347472-n6811ens 186 12 5 5 CD cord-347472-n6811ens 186 13 , , , cord-347472-n6811ens 186 14 and and CC cord-347472-n6811ens 186 15 4 4 CD cord-347472-n6811ens 186 16 clinical clinical JJ cord-347472-n6811ens 186 17 samples sample NNS cord-347472-n6811ens 186 18 , , , cord-347472-n6811ens 186 19 respectively respectively RB cord-347472-n6811ens 186 20 . . . cord-347472-n6811ens 187 1 Pooling pooling NN cord-347472-n6811ens 187 2 was be VBD cord-347472-n6811ens 187 3 performed perform VBN cord-347472-n6811ens 187 4 based base VBN cord-347472-n6811ens 187 5 on on IN cord-347472-n6811ens 187 6 sequence sequence NN cord-347472-n6811ens 187 7 of of IN cord-347472-n6811ens 187 8 the the DT cord-347472-n6811ens 187 9 de de NN cord-347472-n6811ens 187 10 - - VBN cord-347472-n6811ens 187 11 identified identify VBN cord-347472-n6811ens 187 12 serialized serialize VBN cord-347472-n6811ens 187 13 sample sample NN cord-347472-n6811ens 187 14 names name NNS cord-347472-n6811ens 187 15 ( ( -LRB- cord-347472-n6811ens 187 16 Q1 Q1 NNP cord-347472-n6811ens 187 17 , , , cord-347472-n6811ens 187 18 Q2 Q2 NNP cord-347472-n6811ens 187 19 … … NFP cord-347472-n6811ens 187 20 Q14 Q14 NNP cord-347472-n6811ens 187 21 ) ) -RRB- cord-347472-n6811ens 187 22 provided provide VBN cord-347472-n6811ens 187 23 by by IN cord-347472-n6811ens 187 24 the the DT cord-347472-n6811ens 187 25 Stony Stony NNP cord-347472-n6811ens 187 26 Brook Brook NNP cord-347472-n6811ens 187 27 Hospital Hospital NNP cord-347472-n6811ens 187 28 Biobank Biobank NNP cord-347472-n6811ens 187 29 . . . cord-347472-n6811ens 188 1 Sample sample JJ cord-347472-n6811ens 188 2 names name NNS cord-347472-n6811ens 188 3 do do VBP cord-347472-n6811ens 188 4 not not RB cord-347472-n6811ens 188 5 reflect reflect VB cord-347472-n6811ens 188 6 time time NN cord-347472-n6811ens 188 7 of of IN cord-347472-n6811ens 188 8 collection collection NN cord-347472-n6811ens 188 9 nor nor CC cord-347472-n6811ens 188 10 any any DT cord-347472-n6811ens 188 11 other other JJ cord-347472-n6811ens 188 12 patient patient NN cord-347472-n6811ens 188 13 or or CC cord-347472-n6811ens 188 14 sampleintrinsic sampleintrinsic JJ cord-347472-n6811ens 188 15 information information NN cord-347472-n6811ens 188 16 . . . cord-347472-n6811ens 189 1 Pool pool NN cord-347472-n6811ens 189 2 composition composition NN cord-347472-n6811ens 189 3 , , , cord-347472-n6811ens 189 4 beyond beyond IN cord-347472-n6811ens 189 5 positive positive JJ cord-347472-n6811ens 189 6 SARS SARS NNP cord-347472-n6811ens 189 7 - - HYPH cord-347472-n6811ens 189 8 CoV-2 CoV-2 NNP cord-347472-n6811ens 189 9 status status NN cord-347472-n6811ens 189 10 and and CC cord-347472-n6811ens 189 11 by by IN cord-347472-n6811ens 189 12 extraction extraction NN cord-347472-n6811ens 189 13 technology technology NN cord-347472-n6811ens 189 14 , , , cord-347472-n6811ens 189 15 is be VBZ cord-347472-n6811ens 189 16 effectively effectively RB cord-347472-n6811ens 189 17 random random JJ cord-347472-n6811ens 189 18 . . . cord-347472-n6811ens 190 1 8µl 8µl NN cord-347472-n6811ens 190 2 of of IN cord-347472-n6811ens 190 3 each each DT cord-347472-n6811ens 190 4 clinical clinical JJ cord-347472-n6811ens 190 5 purified purify VBN cord-347472-n6811ens 190 6 nucleic nucleic JJ cord-347472-n6811ens 190 7 acid acid NN cord-347472-n6811ens 190 8 specimen specimen NN cord-347472-n6811ens 190 9 was be VBD cord-347472-n6811ens 190 10 pooled pool VBN cord-347472-n6811ens 190 11 into into IN cord-347472-n6811ens 190 12 a a DT cord-347472-n6811ens 190 13 fresh fresh JJ cord-347472-n6811ens 190 14 RNase rnase NN cord-347472-n6811ens 190 15 - - HYPH cord-347472-n6811ens 190 16 free free JJ cord-347472-n6811ens 190 17 polypropylene polypropylene NN cord-347472-n6811ens 190 18 tube tube NN cord-347472-n6811ens 190 19 . . . cord-347472-n6811ens 191 1 8µl 8µl NNP cord-347472-n6811ens 191 2 of of IN cord-347472-n6811ens 191 3 nuclease nuclease NN cord-347472-n6811ens 191 4 - - HYPH cord-347472-n6811ens 191 5 free free JJ cord-347472-n6811ens 191 6 water water NN cord-347472-n6811ens 191 7 was be VBD cord-347472-n6811ens 191 8 added add VBN cord-347472-n6811ens 191 9 to to IN cord-347472-n6811ens 191 10 each each DT cord-347472-n6811ens 191 11 of of IN cord-347472-n6811ens 191 12 the the DT cord-347472-n6811ens 191 13 four four CD cord-347472-n6811ens 191 14 - - HYPH cord-347472-n6811ens 191 15 specimen specimen NN cord-347472-n6811ens 191 16 containing contain VBG cord-347472-n6811ens 191 17 pools pool NNS cord-347472-n6811ens 191 18 to to TO cord-347472-n6811ens 191 19 compensate compensate VB cord-347472-n6811ens 191 20 for for IN cord-347472-n6811ens 191 21 the the DT cord-347472-n6811ens 191 22 lower low JJR cord-347472-n6811ens 191 23 specimen specimen NN cord-347472-n6811ens 191 24 count count NN cord-347472-n6811ens 191 25 ( ( -LRB- cord-347472-n6811ens 191 26 resulting result VBG cord-347472-n6811ens 191 27 in in IN cord-347472-n6811ens 191 28 a a DT cord-347472-n6811ens 191 29 total total JJ cord-347472-n6811ens 191 30 volume volume NN cord-347472-n6811ens 191 31 of of IN cord-347472-n6811ens 191 32 40µl 40µl NN cord-347472-n6811ens 191 33 per per IN cord-347472-n6811ens 191 34 pool pool NN cord-347472-n6811ens 191 35 ) ) -RRB- cord-347472-n6811ens 191 36 . . . cord-347472-n6811ens 192 1 20µl 20µl NN cord-347472-n6811ens 192 2 of of IN cord-347472-n6811ens 192 3 each each DT cord-347472-n6811ens 192 4 pool pool NN cord-347472-n6811ens 192 5 was be VBD cord-347472-n6811ens 192 6 aliquoted aliquote VBN cord-347472-n6811ens 192 7 to to IN cord-347472-n6811ens 192 8 a a DT cord-347472-n6811ens 192 9 fresh fresh JJ cord-347472-n6811ens 192 10 tube tube NN cord-347472-n6811ens 192 11 . . . cord-347472-n6811ens 193 1 20µl 20µl JJ cord-347472-n6811ens 193 2 aliquots aliquot NNS cord-347472-n6811ens 193 3 of of IN cord-347472-n6811ens 193 4 1.73ng/µl 1.73ng/µl CD cord-347472-n6811ens 193 5 Promega Promega NNP cord-347472-n6811ens 193 6 control control NN cord-347472-n6811ens 193 7 DNA dna NN cord-347472-n6811ens 193 8 and and CC cord-347472-n6811ens 193 9 Quantigene Quantigene NNP cord-347472-n6811ens 193 10 RNA RNA NNP cord-347472-n6811ens 193 11 were be VBD cord-347472-n6811ens 193 12 generated generate VBN cord-347472-n6811ens 193 13 , , , cord-347472-n6811ens 193 14 as as IN cord-347472-n6811ens 193 15 were be VBD cord-347472-n6811ens 193 16 20µl 20µl JJ cord-347472-n6811ens 193 17 aliquots aliquot NNS cord-347472-n6811ens 193 18 of of IN cord-347472-n6811ens 193 19 nuclease nuclease NN cord-347472-n6811ens 193 20 - - HYPH cord-347472-n6811ens 193 21 free free JJ cord-347472-n6811ens 193 22 water water NN cord-347472-n6811ens 193 23 as as IN cord-347472-n6811ens 193 24 a a DT cord-347472-n6811ens 193 25 no no DT cord-347472-n6811ens 193 26 - - HYPH cord-347472-n6811ens 193 27 template template NN cord-347472-n6811ens 193 28 control control NN cord-347472-n6811ens 193 29 . . . cord-347472-n6811ens 194 1 1µl 1µl NNP cord-347472-n6811ens 194 2 of of IN cord-347472-n6811ens 194 3 nuclease nuclease DT cord-347472-n6811ens 194 4 free free JJ cord-347472-n6811ens 194 5 water water NN cord-347472-n6811ens 194 6 was be VBD cord-347472-n6811ens 194 7 added add VBN cord-347472-n6811ens 194 8 to to IN cord-347472-n6811ens 194 9 each each DT cord-347472-n6811ens 194 10 of of IN cord-347472-n6811ens 194 11 the the DT cord-347472-n6811ens 194 12 " " `` cord-347472-n6811ens 194 13 sham sham JJ cord-347472-n6811ens 194 14 " " '' cord-347472-n6811ens 194 15 samples sample NNS cord-347472-n6811ens 194 16 ( ( -LRB- cord-347472-n6811ens 194 17 six six CD cord-347472-n6811ens 194 18 pools pool NNS cord-347472-n6811ens 194 19 plus plus CC cord-347472-n6811ens 194 20 three three CD cord-347472-n6811ens 194 21 controls control NNS cord-347472-n6811ens 194 22 ) ) -RRB- cord-347472-n6811ens 194 23 . . . cord-347472-n6811ens 195 1 1µl 1µl NNP cord-347472-n6811ens 195 2 ( ( -LRB- cord-347472-n6811ens 195 3 0.7U/µl 0.7u/µl CD cord-347472-n6811ens 195 4 ) ) -RRB- cord-347472-n6811ens 195 5 of of IN cord-347472-n6811ens 195 6 recombinant recombinant JJ cord-347472-n6811ens 195 7 RNaseA RNaseA NNP cord-347472-n6811ens 195 8 was be VBD cord-347472-n6811ens 195 9 added add VBN cord-347472-n6811ens 195 10 to to IN cord-347472-n6811ens 195 11 each each DT cord-347472-n6811ens 195 12 " " `` cord-347472-n6811ens 195 13 RNase RNase NNP cord-347472-n6811ens 195 14 " " '' cord-347472-n6811ens 195 15 sample sample NN cord-347472-n6811ens 195 16 in in IN cord-347472-n6811ens 195 17 a a DT cord-347472-n6811ens 195 18 physically physically RB cord-347472-n6811ens 195 19 separate separate JJ cord-347472-n6811ens 195 20 laboratory laboratory NN cord-347472-n6811ens 195 21 space space NN cord-347472-n6811ens 195 22 . . . cord-347472-n6811ens 196 1 Capped cap VBN cord-347472-n6811ens 196 2 tubes tube NNS cord-347472-n6811ens 196 3 were be VBD cord-347472-n6811ens 196 4 mixed mixed JJ cord-347472-n6811ens 196 5 , , , cord-347472-n6811ens 196 6 vortexed vortexe VBN cord-347472-n6811ens 196 7 , , , cord-347472-n6811ens 196 8 centrifuged centrifuge VBN cord-347472-n6811ens 196 9 briefly briefly RB cord-347472-n6811ens 196 10 , , , cord-347472-n6811ens 196 11 and and CC cord-347472-n6811ens 196 12 incubated incubate VBN cord-347472-n6811ens 196 13 at at IN cord-347472-n6811ens 196 14 37˚ 37˚ CD cord-347472-n6811ens 196 15 for for IN cord-347472-n6811ens 196 16 90 90 CD cord-347472-n6811ens 196 17 minutes minute NNS cord-347472-n6811ens 196 18 immediately immediately RB cord-347472-n6811ens 196 19 prior prior RB cord-347472-n6811ens 196 20 to to IN cord-347472-n6811ens 196 21 RT RT NNP cord-347472-n6811ens 196 22 - - HYPH cord-347472-n6811ens 196 23 qPCR qpcr NN cord-347472-n6811ens 196 24 setup setup NN cord-347472-n6811ens 196 25 . . . cord-347472-n6811ens 197 1 One one CD cord-347472-n6811ens 197 2 - - HYPH cord-347472-n6811ens 197 3 step step NN cord-347472-n6811ens 197 4 RT RT NNP cord-347472-n6811ens 197 5 - - HYPH cord-347472-n6811ens 197 6 qPCR qPCR NNP cord-347472-n6811ens 197 7 was be VBD cord-347472-n6811ens 197 8 performed perform VBN cord-347472-n6811ens 197 9 on on IN cord-347472-n6811ens 197 10 treated treated JJ cord-347472-n6811ens 197 11 and and CC cord-347472-n6811ens 197 12 control control NN cord-347472-n6811ens 197 13 samples sample NNS cord-347472-n6811ens 197 14 using use VBG cord-347472-n6811ens 197 15 CDC CDC NNP cord-347472-n6811ens 197 16 - - HYPH cord-347472-n6811ens 197 17 RP RP NNP cord-347472-n6811ens 197 18 , , , cord-347472-n6811ens 197 19 CDC CDC NNP cord-347472-n6811ens 197 20 - - HYPH cord-347472-n6811ens 197 21 N1 N1 NNP cord-347472-n6811ens 197 22 , , , cord-347472-n6811ens 197 23 CDC CDC NNP cord-347472-n6811ens 197 24 - - HYPH cord-347472-n6811ens 197 25 N2 N2 NNP cord-347472-n6811ens 197 26 , , , cord-347472-n6811ens 197 27 and and CC cord-347472-n6811ens 197 28 Hs Hs NNP cord-347472-n6811ens 197 29 . . . cord-347472-n6811ens 198 1 PT.58.2854947 PT.58.2854947 NNP cord-347472-n6811ens 198 2 assays assays NNP cord-347472-n6811ens 198 3 . . . cord-347472-n6811ens 199 1 Plotting plotting NN cord-347472-n6811ens 199 2 of of IN cord-347472-n6811ens 199 3 raw raw JJ cord-347472-n6811ens 199 4 qPCR qpcr NN cord-347472-n6811ens 199 5 data datum NNS cord-347472-n6811ens 199 6 Raw Raw NNP cord-347472-n6811ens 199 7 qPCR qPCR NNP cord-347472-n6811ens 199 8 data datum NNS cord-347472-n6811ens 199 9 were be VBD cord-347472-n6811ens 199 10 exported export VBN cord-347472-n6811ens 199 11 as as IN cord-347472-n6811ens 199 12 deltaRN deltaRN NNP cord-347472-n6811ens 199 13 ( ( -LRB- cord-347472-n6811ens 199 14 ROX rox NN cord-347472-n6811ens 199 15 - - HYPH cord-347472-n6811ens 199 16 normalized normalize VBN cord-347472-n6811ens 199 17 , , , cord-347472-n6811ens 199 18 background background NN cord-347472-n6811ens 199 19 subtracted subtract VBN cord-347472-n6811ens 199 20 fluorescence fluorescence NN cord-347472-n6811ens 199 21 ) ) -RRB- cord-347472-n6811ens 199 22 per per IN cord-347472-n6811ens 199 23 cycle cycle NN cord-347472-n6811ens 199 24 using use VBG cord-347472-n6811ens 199 25 QuantStudio QuantStudio NNP cord-347472-n6811ens 199 26 . . . cord-347472-n6811ens 199 27 " " '' cord-347472-n6811ens 200 1 AmplificationData AmplificationData NNP cord-347472-n6811ens 200 2 " " `` cord-347472-n6811ens 200 3 were be VBD cord-347472-n6811ens 200 4 imported import VBN cord-347472-n6811ens 200 5 into into IN cord-347472-n6811ens 200 6 R r NN cord-347472-n6811ens 200 7 for for IN cord-347472-n6811ens 200 8 plotting plot VBG cord-347472-n6811ens 200 9 . . . cord-347472-n6811ens 201 1 Optical optical JJ cord-347472-n6811ens 201 2 and and CC cord-347472-n6811ens 201 3 quantization quantization NN cord-347472-n6811ens 201 4 noise noise NN cord-347472-n6811ens 201 5 result result NN cord-347472-n6811ens 201 6 in in IN cord-347472-n6811ens 201 7 small small JJ cord-347472-n6811ens 201 8 values value NNS cord-347472-n6811ens 201 9 centered center VBN cord-347472-n6811ens 201 10 around around RB cord-347472-n6811ens 201 11 0 0 CD cord-347472-n6811ens 202 1 ( ( -LRB- cord-347472-n6811ens 202 2 i.e. i.e. FW cord-347472-n6811ens 202 3 either either CC cord-347472-n6811ens 202 4 + + SYM cord-347472-n6811ens 202 5 or or CC cord-347472-n6811ens 202 6 -1x10 -1x10 NN cord-347472-n6811ens 202 7 -4 -4 ADD cord-347472-n6811ens 202 8 ) ) -RRB- cord-347472-n6811ens 203 1 during during IN cord-347472-n6811ens 203 2 cycles cycle NNS cord-347472-n6811ens 203 3 prior prior RB cord-347472-n6811ens 203 4 to to IN cord-347472-n6811ens 203 5 generation generation NN cord-347472-n6811ens 203 6 of of IN cord-347472-n6811ens 203 7 detectable detectable JJ cord-347472-n6811ens 203 8 signal signal NN cord-347472-n6811ens 203 9 . . . cord-347472-n6811ens 204 1 To to TO cord-347472-n6811ens 204 2 eliminate eliminate VB cord-347472-n6811ens 204 3 undefined undefined JJ cord-347472-n6811ens 204 4 log10 log10 NN cord-347472-n6811ens 204 5 transformation transformation NN cord-347472-n6811ens 204 6 errors error NNS cord-347472-n6811ens 204 7 of of IN cord-347472-n6811ens 204 8 negative negative JJ cord-347472-n6811ens 204 9 values value NNS cord-347472-n6811ens 204 10 , , , cord-347472-n6811ens 204 11 a a DT cord-347472-n6811ens 204 12 small small JJ cord-347472-n6811ens 204 13 offset offset NN cord-347472-n6811ens 204 14 value value NN cord-347472-n6811ens 204 15 of of IN cord-347472-n6811ens 204 16 0.004 0.004 CD cord-347472-n6811ens 204 17 was be VBD cord-347472-n6811ens 204 18 added add VBN cord-347472-n6811ens 204 19 to to IN cord-347472-n6811ens 204 20 each each DT cord-347472-n6811ens 204 21 DeltaRN deltarn RB cord-347472-n6811ens 204 22 signal signal NN cord-347472-n6811ens 204 23 prior prior RB cord-347472-n6811ens 204 24 to to IN cord-347472-n6811ens 204 25 plotting plot VBG cord-347472-n6811ens 204 26 on on IN cord-347472-n6811ens 204 27 log log NN cord-347472-n6811ens 204 28 - - HYPH cord-347472-n6811ens 204 29 axis axis NN cord-347472-n6811ens 204 30 scale scale NN cord-347472-n6811ens 204 31 . . . cord-347472-n6811ens 205 1 This this DT cord-347472-n6811ens 205 2 is be VBZ cord-347472-n6811ens 205 3 evident evident JJ cord-347472-n6811ens 205 4 as as IN cord-347472-n6811ens 205 5 a a DT cord-347472-n6811ens 205 6 displayed display VBN cord-347472-n6811ens 205 7 baseline baseline JJ cord-347472-n6811ens 205 8 signal signal NN cord-347472-n6811ens 205 9 centered center VBN cord-347472-n6811ens 205 10 around around IN cord-347472-n6811ens 205 11 0.004 0.004 CD cord-347472-n6811ens 205 12 in in IN cord-347472-n6811ens 205 13 Figure figure NN cord-347472-n6811ens 205 14 4 4 CD cord-347472-n6811ens 205 15 . . . cord-347472-n6811ens 206 1 Unmodified unmodified JJ cord-347472-n6811ens 206 2 data datum NNS cord-347472-n6811ens 206 3 were be VBD cord-347472-n6811ens 206 4 used use VBN cord-347472-n6811ens 206 5 for for IN cord-347472-n6811ens 206 6 all all DT cord-347472-n6811ens 206 7 calculations calculation NNS cord-347472-n6811ens 206 8 and and CC cord-347472-n6811ens 206 9 are be VBP cord-347472-n6811ens 206 10 included include VBN cord-347472-n6811ens 206 11 in in IN cord-347472-n6811ens 206 12 Supplementary Supplementary NNP cord-347472-n6811ens 206 13 Data Data NNP cord-347472-n6811ens 206 14 ; ; : cord-347472-n6811ens 206 15 this this DT cord-347472-n6811ens 206 16 transformation transformation NN cord-347472-n6811ens 206 17 is be VBZ cord-347472-n6811ens 206 18 for for IN cord-347472-n6811ens 206 19 convenience convenience NN cord-347472-n6811ens 206 20 to to TO cord-347472-n6811ens 206 21 make make VB cord-347472-n6811ens 206 22 ≤0 ≤0 NN cord-347472-n6811ens 206 23 data datum NNS cord-347472-n6811ens 206 24 plottable plottable JJ cord-347472-n6811ens 206 25 on on IN cord-347472-n6811ens 206 26 a a DT cord-347472-n6811ens 206 27 logarithmic logarithmic JJ cord-347472-n6811ens 206 28 axis axis NN cord-347472-n6811ens 206 29 . . . cord-347472-n6811ens 207 1 Controls control NNS cord-347472-n6811ens 207 2 are be VBP cord-347472-n6811ens 207 3 useful useful JJ cord-347472-n6811ens 207 4 ; ; : cord-347472-n6811ens 207 5 why why WRB cord-347472-n6811ens 207 6 not not RB cord-347472-n6811ens 207 7 add add VB cord-347472-n6811ens 207 8 more more JJR cord-347472-n6811ens 207 9 ? ? . cord-347472-n6811ens 208 1 Assay assay NN cord-347472-n6811ens 208 2 design design NN cord-347472-n6811ens 208 3 should should MD cord-347472-n6811ens 208 4 be be VB cord-347472-n6811ens 208 5 fit fit JJ cord-347472-n6811ens 208 6 to to IN cord-347472-n6811ens 208 7 task task NN cord-347472-n6811ens 208 8 and and CC cord-347472-n6811ens 208 9 balance balance NN cord-347472-n6811ens 208 10 throughput throughput NN cord-347472-n6811ens 208 11 , , , cord-347472-n6811ens 208 12 cost cost NN cord-347472-n6811ens 208 13 , , , cord-347472-n6811ens 208 14 and and CC cord-347472-n6811ens 208 15 sensitivity sensitivity NN cord-347472-n6811ens 208 16 / / SYM cord-347472-n6811ens 208 17 specificity specificity NN cord-347472-n6811ens 208 18 . . . cord-347472-n6811ens 209 1 Controls control NNS cord-347472-n6811ens 209 2 are be VBP cord-347472-n6811ens 209 3 necessary necessary JJ cord-347472-n6811ens 209 4 , , , cord-347472-n6811ens 209 5 but but CC cord-347472-n6811ens 209 6 add add VB cord-347472-n6811ens 209 7 assay assay NN cord-347472-n6811ens 209 8 complexity complexity NN cord-347472-n6811ens 209 9 , , , cord-347472-n6811ens 209 10 reagent reagent JJ cord-347472-n6811ens 209 11 cost cost NN cord-347472-n6811ens 209 12 , , , cord-347472-n6811ens 209 13 and and CC cord-347472-n6811ens 209 14 can can MD cord-347472-n6811ens 209 15 compete compete VB cord-347472-n6811ens 209 16 with with IN cord-347472-n6811ens 209 17 throughput throughput NN cord-347472-n6811ens 209 18 . . . cord-347472-n6811ens 210 1 The the DT cord-347472-n6811ens 210 2 current current JJ cord-347472-n6811ens 210 3 CDC CDC NNP cord-347472-n6811ens 210 4 - - HYPH cord-347472-n6811ens 210 5 EUA EUA NNP cord-347472-n6811ens 210 6 uses use VBZ cord-347472-n6811ens 210 7 a a DT cord-347472-n6811ens 210 8 single single JJ cord-347472-n6811ens 210 9 detection detection NN cord-347472-n6811ens 210 10 channel channel NN cord-347472-n6811ens 210 11 , , , cord-347472-n6811ens 210 12 6-carboxyfluoroscein 6-carboxyfluoroscein CD cord-347472-n6811ens 210 13 , , , cord-347472-n6811ens 210 14 for for IN cord-347472-n6811ens 210 15 each each DT cord-347472-n6811ens 210 16 of of IN cord-347472-n6811ens 210 17 three three CD cord-347472-n6811ens 210 18 probes probe NNS cord-347472-n6811ens 210 19 that that WDT cord-347472-n6811ens 210 20 are be VBP cord-347472-n6811ens 210 21 analyzed analyze VBN cord-347472-n6811ens 210 22 separately separately RB cord-347472-n6811ens 210 23 . . . cord-347472-n6811ens 211 1 Three three CD cord-347472-n6811ens 211 2 wells well NNS cord-347472-n6811ens 211 3 are be VBP cord-347472-n6811ens 211 4 required require VBN cord-347472-n6811ens 211 5 per per IN cord-347472-n6811ens 211 6 patient patient NN cord-347472-n6811ens 211 7 or or CC cord-347472-n6811ens 211 8 control control NN cord-347472-n6811ens 211 9 specimen specimen NN cord-347472-n6811ens 211 10 . . . cord-347472-n6811ens 212 1 Adding add VBG cord-347472-n6811ens 212 2 even even RB cord-347472-n6811ens 212 3 one one CD cord-347472-n6811ens 212 4 more more JJR cord-347472-n6811ens 212 5 control control NN cord-347472-n6811ens 212 6 decreases decrease VBZ cord-347472-n6811ens 212 7 assay assay NN cord-347472-n6811ens 212 8 capacity capacity NN cord-347472-n6811ens 212 9 by by IN cord-347472-n6811ens 212 10 25 25 CD cord-347472-n6811ens 212 11 % % NN cord-347472-n6811ens 212 12 while while IN cord-347472-n6811ens 212 13 increasing increase VBG cord-347472-n6811ens 212 14 the the DT cord-347472-n6811ens 212 15 cost cost NN cord-347472-n6811ens 212 16 of of IN cord-347472-n6811ens 212 17 One one CD cord-347472-n6811ens 212 18 - - HYPH cord-347472-n6811ens 212 19 step step NN cord-347472-n6811ens 212 20 mastermix mastermix NNS cord-347472-n6811ens 212 21 per per IN cord-347472-n6811ens 212 22 patient patient NN cord-347472-n6811ens 212 23 by by IN cord-347472-n6811ens 212 24 the the DT cord-347472-n6811ens 212 25 same same JJ cord-347472-n6811ens 212 26 amount amount NN cord-347472-n6811ens 212 27 . . . cord-347472-n6811ens 213 1 More More JJR cord-347472-n6811ens 213 2 is be VBZ cord-347472-n6811ens 213 3 not not RB cord-347472-n6811ens 213 4 always always RB cord-347472-n6811ens 213 5 necessary necessary JJ cord-347472-n6811ens 213 6 . . . cord-347472-n6811ens 214 1 A a DT cord-347472-n6811ens 214 2 well well RB cord-347472-n6811ens 214 3 designed design VBN cord-347472-n6811ens 214 4 , , , cord-347472-n6811ens 214 5 transcript transcript NN cord-347472-n6811ens 214 6 - - HYPH cord-347472-n6811ens 214 7 specific specific JJ cord-347472-n6811ens 214 8 sample sample NN cord-347472-n6811ens 214 9 collection collection NN cord-347472-n6811ens 214 10 , , , cord-347472-n6811ens 214 11 extraction extraction NN cord-347472-n6811ens 214 12 , , , cord-347472-n6811ens 214 13 and and CC cord-347472-n6811ens 214 14 RT RT NNP cord-347472-n6811ens 214 15 - - HYPH cord-347472-n6811ens 214 16 qPCR qPCR NNP cord-347472-n6811ens 214 17 probe probe NN cord-347472-n6811ens 214 18 can can MD cord-347472-n6811ens 214 19 achieve achieve VB cord-347472-n6811ens 214 20 a a DT cord-347472-n6811ens 214 21 composite composite JJ cord-347472-n6811ens 214 22 control control NN cord-347472-n6811ens 214 23 using use VBG cord-347472-n6811ens 214 24 one one CD cord-347472-n6811ens 214 25 channel channel NN cord-347472-n6811ens 214 26 . . . cord-347472-n6811ens 215 1 If if IN cord-347472-n6811ens 215 2 the the DT cord-347472-n6811ens 215 3 control control NN cord-347472-n6811ens 215 4 does do VBZ cord-347472-n6811ens 215 5 not not RB cord-347472-n6811ens 215 6 turn turn VB cord-347472-n6811ens 215 7 positive positive JJ cord-347472-n6811ens 215 8 , , , cord-347472-n6811ens 215 9 a a DT cord-347472-n6811ens 215 10 virus virus NN cord-347472-n6811ens 215 11 - - HYPH cord-347472-n6811ens 215 12 negative negative JJ cord-347472-n6811ens 215 13 reaction reaction NN cord-347472-n6811ens 215 14 can can MD cord-347472-n6811ens 215 15 not not RB cord-347472-n6811ens 215 16 be be VB cord-347472-n6811ens 215 17 trusted trust VBN cord-347472-n6811ens 215 18 . . . cord-347472-n6811ens 216 1 A a DT cord-347472-n6811ens 216 2 composite composite JJ cord-347472-n6811ens 216 3 control control NN cord-347472-n6811ens 216 4 does do VBZ cord-347472-n6811ens 216 5 not not RB cord-347472-n6811ens 216 6 specify specify VB cord-347472-n6811ens 216 7 where where WRB cord-347472-n6811ens 216 8 a a DT cord-347472-n6811ens 216 9 problem problem NN cord-347472-n6811ens 216 10 occurred occur VBD cord-347472-n6811ens 216 11 , , , cord-347472-n6811ens 216 12 only only RB cord-347472-n6811ens 216 13 that that DT cord-347472-n6811ens 216 14 one one NN cord-347472-n6811ens 216 15 has have VBZ cord-347472-n6811ens 216 16 . . . cord-347472-n6811ens 217 1 Modern modern JJ cord-347472-n6811ens 217 2 qPCR qpcr XX cord-347472-n6811ens 218 1 ( ( -LRB- cord-347472-n6811ens 218 2 and and CC cord-347472-n6811ens 218 3 by by IN cord-347472-n6811ens 218 4 extension extension NN cord-347472-n6811ens 218 5 , , , cord-347472-n6811ens 218 6 RT RT NNP cord-347472-n6811ens 218 7 - - HYPH cord-347472-n6811ens 218 8 qPCR qPCR NNP cord-347472-n6811ens 218 9 ) ) -RRB- cord-347472-n6811ens 218 10 is be VBZ cord-347472-n6811ens 218 11 not not RB cord-347472-n6811ens 218 12 limited limit VBN cord-347472-n6811ens 218 13 to to IN cord-347472-n6811ens 218 14 a a DT cord-347472-n6811ens 218 15 single single JJ cord-347472-n6811ens 218 16 detection detection NN cord-347472-n6811ens 218 17 channel channel NN cord-347472-n6811ens 218 18 ; ; , cord-347472-n6811ens 218 19 multiplex multiplex JJ cord-347472-n6811ens 218 20 designs design NNS cord-347472-n6811ens 218 21 can can MD cord-347472-n6811ens 218 22 generate generate VB cord-347472-n6811ens 218 23 data datum NNS cord-347472-n6811ens 218 24 from from IN cord-347472-n6811ens 218 25 two two CD cord-347472-n6811ens 218 26 to to TO cord-347472-n6811ens 218 27 five five CD cord-347472-n6811ens 218 28 ( ( -LRB- cord-347472-n6811ens 218 29 or or CC cord-347472-n6811ens 218 30 more more JJR cord-347472-n6811ens 218 31 ) ) -RRB- cord-347472-n6811ens 218 32 targets target NNS cord-347472-n6811ens 218 33 in in IN cord-347472-n6811ens 218 34 a a DT cord-347472-n6811ens 218 35 single single JJ cord-347472-n6811ens 218 36 well well NN cord-347472-n6811ens 218 37 . . . cord-347472-n6811ens 219 1 Multiple multiple JJ cord-347472-n6811ens 219 2 fluorescent fluorescent JJ cord-347472-n6811ens 219 3 dyes dye NNS cord-347472-n6811ens 219 4 on on IN cord-347472-n6811ens 219 5 probes probe NNS cord-347472-n6811ens 219 6 of of IN cord-347472-n6811ens 219 7 different different JJ cord-347472-n6811ens 219 8 sequence sequence NN cord-347472-n6811ens 219 9 can can MD cord-347472-n6811ens 219 10 be be VB cord-347472-n6811ens 219 11 combined combine VBN cord-347472-n6811ens 219 12 in in IN cord-347472-n6811ens 219 13 carefully carefully RB cord-347472-n6811ens 219 14 - - HYPH cord-347472-n6811ens 219 15 designed design VBN cord-347472-n6811ens 219 16 assays assay NNS cord-347472-n6811ens 219 17 , , , cord-347472-n6811ens 219 18 increasing increase VBG cord-347472-n6811ens 219 19 the the DT cord-347472-n6811ens 219 20 number number NN cord-347472-n6811ens 219 21 of of IN cord-347472-n6811ens 219 22 targets target NNS cord-347472-n6811ens 219 23 that that WDT cord-347472-n6811ens 219 24 can can MD cord-347472-n6811ens 219 25 be be VB cord-347472-n6811ens 219 26 interrogated interrogate VBN cord-347472-n6811ens 219 27 in in IN cord-347472-n6811ens 219 28 one one CD cord-347472-n6811ens 219 29 tube tube NN cord-347472-n6811ens 219 30 . . . cord-347472-n6811ens 220 1 Limitations limitation NNS cord-347472-n6811ens 220 2 of of IN cord-347472-n6811ens 220 3 multiplex multiplex JJ cord-347472-n6811ens 220 4 qPCR qpcr NN cord-347472-n6811ens 220 5 hardware hardware NN cord-347472-n6811ens 220 6 , , , cord-347472-n6811ens 220 7 fluorescent fluorescent NN cord-347472-n6811ens 220 8 dyes dye NNS cord-347472-n6811ens 220 9 , , , cord-347472-n6811ens 220 10 and and CC cord-347472-n6811ens 220 11 the the DT cord-347472-n6811ens 220 12 realities reality NNS cord-347472-n6811ens 220 13 of of IN cord-347472-n6811ens 220 14 molecular molecular JJ cord-347472-n6811ens 220 15 biology biology NN cord-347472-n6811ens 220 16 constrain constrain VBP cord-347472-n6811ens 220 17 the the DT cord-347472-n6811ens 220 18 degree degree NN cord-347472-n6811ens 220 19 of of IN cord-347472-n6811ens 220 20 multiplexing multiplexing NN cord-347472-n6811ens 220 21 and and CC cord-347472-n6811ens 220 22 drive drive VB cord-347472-n6811ens 220 23 design design NN cord-347472-n6811ens 220 24 concessions concession NNS cord-347472-n6811ens 220 25 . . . cord-347472-n6811ens 221 1 Multiplex multiplex JJ cord-347472-n6811ens 221 2 designs design NNS cord-347472-n6811ens 221 3 are be VBP cord-347472-n6811ens 221 4 widely widely RB cord-347472-n6811ens 221 5 used use VBN cord-347472-n6811ens 221 6 in in IN cord-347472-n6811ens 221 7 the the DT cord-347472-n6811ens 221 8 clinic clinic NN cord-347472-n6811ens 221 9 , , , cord-347472-n6811ens 221 10 including include VBG cord-347472-n6811ens 221 11 for for IN cord-347472-n6811ens 221 12 SARS SARS NNP cord-347472-n6811ens 221 13 - - HYPH cord-347472-n6811ens 221 14 CoV-2 CoV-2 NNP cord-347472-n6811ens 221 15 testing testing NN cord-347472-n6811ens 221 16 . . . cord-347472-n6811ens 222 1 The the DT cord-347472-n6811ens 222 2 ability ability NN cord-347472-n6811ens 222 3 to to TO cord-347472-n6811ens 222 4 multiplex multiplex NN cord-347472-n6811ens 222 5 does do VBZ cord-347472-n6811ens 222 6 not not RB cord-347472-n6811ens 222 7 obviate obviate VB cord-347472-n6811ens 222 8 good good JJ cord-347472-n6811ens 222 9 assay assay NN cord-347472-n6811ens 222 10 design design NN cord-347472-n6811ens 222 11 . . . cord-347472-n6811ens 223 1 Several several JJ cord-347472-n6811ens 223 2 current current JJ cord-347472-n6811ens 223 3 panel panel NN cord-347472-n6811ens 223 4 designs design NNS cord-347472-n6811ens 223 5 use use VBP cord-347472-n6811ens 223 6 a a DT cord-347472-n6811ens 223 7 synthetic synthetic JJ cord-347472-n6811ens 223 8 RNA rna NN cord-347472-n6811ens 223 9 spike spike NN cord-347472-n6811ens 223 10 - - HYPH cord-347472-n6811ens 223 11 in in NN cord-347472-n6811ens 223 12 to to TO cord-347472-n6811ens 223 13 monitor monitor VB cord-347472-n6811ens 223 14 extraction extraction NN cord-347472-n6811ens 223 15 and and CC cord-347472-n6811ens 223 16 reverse reverse VB cord-347472-n6811ens 223 17 transcription transcription NN cord-347472-n6811ens 223 18 / / SYM cord-347472-n6811ens 223 19 PCR pcr NN cord-347472-n6811ens 223 20 . . . cord-347472-n6811ens 224 1 Patient patient JJ cord-347472-n6811ens 224 2 sampling sampling NN cord-347472-n6811ens 224 3 and and CC cord-347472-n6811ens 224 4 extraction extraction NN cord-347472-n6811ens 224 5 controls control NNS cord-347472-n6811ens 224 6 are be VBP cord-347472-n6811ens 224 7 critical critical JJ cord-347472-n6811ens 224 8 to to IN cord-347472-n6811ens 224 9 clinical clinical JJ cord-347472-n6811ens 224 10 interpretation interpretation NN cord-347472-n6811ens 224 11 and and CC cord-347472-n6811ens 224 12 should should MD cord-347472-n6811ens 224 13 be be VB cord-347472-n6811ens 224 14 prioritized prioritize VBN cord-347472-n6811ens 224 15 . . . cord-347472-n6811ens 225 1 As as IN cord-347472-n6811ens 225 2 of of IN cord-347472-n6811ens 225 3 May May NNP cord-347472-n6811ens 225 4 12 12 CD cord-347472-n6811ens 225 5 , , , cord-347472-n6811ens 225 6 2020 2020 CD cord-347472-n6811ens 225 7 , , , cord-347472-n6811ens 225 8 none none NN cord-347472-n6811ens 225 9 of of IN cord-347472-n6811ens 225 10 the the DT cord-347472-n6811ens 225 11 FDA FDA NNP cord-347472-n6811ens 225 12 EUA'd EUA'd NNP cord-347472-n6811ens 225 13 SARS SARS NNP cord-347472-n6811ens 225 14 - - HYPH cord-347472-n6811ens 225 15 CoV-2 CoV-2 NNP cord-347472-n6811ens 225 16 assay assay NN cord-347472-n6811ens 225 17 designs design NNS cord-347472-n6811ens 225 18 contain contain VBP cord-347472-n6811ens 225 19 both both CC cord-347472-n6811ens 225 20 a a DT cord-347472-n6811ens 225 21 human human JJ cord-347472-n6811ens 225 22 sample sample NN cord-347472-n6811ens 225 23 collection collection NN cord-347472-n6811ens 225 24 control control NN cord-347472-n6811ens 225 25 and and CC cord-347472-n6811ens 225 26 a a DT cord-347472-n6811ens 225 27 separate separate JJ cord-347472-n6811ens 225 28 extraction extraction NN cord-347472-n6811ens 225 29 / / SYM cord-347472-n6811ens 225 30 RT RT NNP cord-347472-n6811ens 225 31 control control NN cord-347472-n6811ens 225 32 . . . cord-347472-n6811ens 226 1 Four four CD cord-347472-n6811ens 226 2 - - HYPH cord-347472-n6811ens 226 3 plex plex NNP cord-347472-n6811ens 226 4 RT RT NNP cord-347472-n6811ens 226 5 - - HYPH cord-347472-n6811ens 226 6 qPCR qPCR NNP cord-347472-n6811ens 226 7 , , , cord-347472-n6811ens 226 8 used use VBN cord-347472-n6811ens 226 9 by by IN cord-347472-n6811ens 226 10 several several JJ cord-347472-n6811ens 226 11 panels panel NNS cord-347472-n6811ens 226 12 , , , cord-347472-n6811ens 226 13 could could MD cord-347472-n6811ens 226 14 be be VB cord-347472-n6811ens 226 15 leveraged leverage VBN cord-347472-n6811ens 226 16 as as IN cord-347472-n6811ens 226 17 a a DT cord-347472-n6811ens 226 18 pair pair NN cord-347472-n6811ens 226 19 of of IN cord-347472-n6811ens 226 20 viral viral JJ cord-347472-n6811ens 226 21 probes probe NNS cord-347472-n6811ens 226 22 , , , cord-347472-n6811ens 226 23 an an DT cord-347472-n6811ens 226 24 RNA RNA NNP cord-347472-n6811ens 226 25 spike spike NN cord-347472-n6811ens 226 26 to to TO cord-347472-n6811ens 226 27 monitor monitor VB cord-347472-n6811ens 226 28 extraction extraction NN cord-347472-n6811ens 226 29 / / SYM cord-347472-n6811ens 226 30 RT RT NNP cord-347472-n6811ens 226 31 - - HYPH cord-347472-n6811ens 226 32 qPCR qPCR NNP cord-347472-n6811ens 226 33 , , , cord-347472-n6811ens 226 34 and and CC cord-347472-n6811ens 226 35 an an DT cord-347472-n6811ens 226 36 RNA rna NN cord-347472-n6811ens 226 37 - - HYPH cord-347472-n6811ens 226 38 specific specific JJ cord-347472-n6811ens 226 39 human human JJ cord-347472-n6811ens 226 40 specimen specimen NN cord-347472-n6811ens 226 41 control control NN cord-347472-n6811ens 226 42 . . . cord-347472-n6811ens 227 1 This this DT cord-347472-n6811ens 227 2 approach approach NN cord-347472-n6811ens 227 3 retains retain VBZ cord-347472-n6811ens 227 4 control control NN cord-347472-n6811ens 227 5 for for IN cord-347472-n6811ens 227 6 presence presence NN cord-347472-n6811ens 227 7 of of IN cord-347472-n6811ens 227 8 a a DT cord-347472-n6811ens 227 9 human human JJ cord-347472-n6811ens 227 10 specimen specimen NN cord-347472-n6811ens 227 11 while while IN cord-347472-n6811ens 227 12 providing provide VBG cord-347472-n6811ens 227 13 more more JJR cord-347472-n6811ens 227 14 granularity granularity NN cord-347472-n6811ens 227 15 than than IN cord-347472-n6811ens 227 16 available available JJ cord-347472-n6811ens 227 17 from from IN cord-347472-n6811ens 227 18 a a DT cord-347472-n6811ens 227 19 single single JJ cord-347472-n6811ens 227 20 composite composite JJ cord-347472-n6811ens 227 21 control control NN cord-347472-n6811ens 227 22 , , , cord-347472-n6811ens 227 23 such such JJ cord-347472-n6811ens 227 24 as as IN cord-347472-n6811ens 227 25 a a DT cord-347472-n6811ens 227 26 transcript transcript NN cord-347472-n6811ens 227 27 - - HYPH cord-347472-n6811ens 227 28 specific specific JJ cord-347472-n6811ens 227 29 RPP30 RPP30 NNP cord-347472-n6811ens 227 30 probe probe NN cord-347472-n6811ens 227 31 . . . cord-347472-n6811ens 228 1 This this DT cord-347472-n6811ens 228 2 two two CD cord-347472-n6811ens 228 3 - - HYPH cord-347472-n6811ens 228 4 control control NN cord-347472-n6811ens 228 5 design design NN cord-347472-n6811ens 228 6 would would MD cord-347472-n6811ens 228 7 enable enable VB cord-347472-n6811ens 228 8 more more RBR cord-347472-n6811ens 228 9 efficient efficient JJ cord-347472-n6811ens 228 10 handling handling NN cord-347472-n6811ens 228 11 of of IN cord-347472-n6811ens 228 12 specimens specimen NNS cord-347472-n6811ens 228 13 where where WRB cord-347472-n6811ens 228 14 no no DT cord-347472-n6811ens 228 15 human human JJ cord-347472-n6811ens 228 16 specimen specimen NN cord-347472-n6811ens 228 17 control control NN cord-347472-n6811ens 228 18 signal signal NN cord-347472-n6811ens 228 19 is be VBZ cord-347472-n6811ens 228 20 generated generate VBN cord-347472-n6811ens 228 21 . . . cord-347472-n6811ens 229 1 An an DT cord-347472-n6811ens 229 2 intact intact JJ cord-347472-n6811ens 229 3 spike spike NN cord-347472-n6811ens 229 4 - - HYPH cord-347472-n6811ens 229 5 in in RP cord-347472-n6811ens 229 6 signal signal NN cord-347472-n6811ens 229 7 would would MD cord-347472-n6811ens 229 8 mean mean VB cord-347472-n6811ens 229 9 that that IN cord-347472-n6811ens 229 10 that that DT cord-347472-n6811ens 229 11 extraction extraction NN cord-347472-n6811ens 229 12 and and CC cord-347472-n6811ens 229 13 downstream downstream JJ cord-347472-n6811ens 229 14 handling handling NN cord-347472-n6811ens 229 15 of of IN cord-347472-n6811ens 229 16 RNA RNA NNP cord-347472-n6811ens 229 17 through through IN cord-347472-n6811ens 229 18 RT RT NNP cord-347472-n6811ens 229 19 - - HYPH cord-347472-n6811ens 229 20 qPCR qPCR NNP cord-347472-n6811ens 229 21 were be VBD cord-347472-n6811ens 229 22 successful successful JJ cord-347472-n6811ens 229 23 , , , cord-347472-n6811ens 229 24 despite despite IN cord-347472-n6811ens 229 25 no no DT cord-347472-n6811ens 229 26 patient patient NN cord-347472-n6811ens 229 27 RNA RNA NNP cord-347472-n6811ens 229 28 having have VBG cord-347472-n6811ens 229 29 been be VBN cord-347472-n6811ens 229 30 obtained obtain VBN cord-347472-n6811ens 229 31 . . . cord-347472-n6811ens 230 1 Patients patient NNS cord-347472-n6811ens 230 2 should should MD cord-347472-n6811ens 230 3 be be VB cord-347472-n6811ens 230 4 called call VBN cord-347472-n6811ens 230 5 back back RB cord-347472-n6811ens 230 6 in in RB cord-347472-n6811ens 230 7 , , , cord-347472-n6811ens 230 8 re re VBN cord-347472-n6811ens 230 9 - - VBN cord-347472-n6811ens 230 10 sampled sample VBN cord-347472-n6811ens 230 11 , , , cord-347472-n6811ens 230 12 re re VBN cord-347472-n6811ens 230 13 - - VBN cord-347472-n6811ens 230 14 extracted extract VBN cord-347472-n6811ens 230 15 , , , cord-347472-n6811ens 230 16 and and CC cord-347472-n6811ens 230 17 re re VBN cord-347472-n6811ens 230 18 - - VBN cord-347472-n6811ens 230 19 tested test VBN cord-347472-n6811ens 230 20 . . . cord-347472-n6811ens 231 1 In in IN cord-347472-n6811ens 231 2 contrast contrast NN cord-347472-n6811ens 231 3 , , , cord-347472-n6811ens 231 4 failure failure NN cord-347472-n6811ens 231 5 of of IN cord-347472-n6811ens 231 6 the the DT cord-347472-n6811ens 231 7 spike spike NN cord-347472-n6811ens 231 8 - - HYPH cord-347472-n6811ens 231 9 in in RP cord-347472-n6811ens 231 10 control control NN cord-347472-n6811ens 231 11 means mean VBZ cord-347472-n6811ens 231 12 that that IN cord-347472-n6811ens 231 13 something something NN cord-347472-n6811ens 231 14 likely likely RB cord-347472-n6811ens 231 15 went go VBD cord-347472-n6811ens 231 16 amiss amiss JJ cord-347472-n6811ens 231 17 during during IN cord-347472-n6811ens 231 18 handling handling NN cord-347472-n6811ens 231 19 . . . cord-347472-n6811ens 232 1 Whether whether IN cord-347472-n6811ens 232 2 caused cause VBN cord-347472-n6811ens 232 3 by by IN cord-347472-n6811ens 232 4 a a DT cord-347472-n6811ens 232 5 bad bad JJ cord-347472-n6811ens 232 6 pipet pipet NN cord-347472-n6811ens 232 7 tip tip NN cord-347472-n6811ens 232 8 , , , cord-347472-n6811ens 232 9 a a DT cord-347472-n6811ens 232 10 one one CD cord-347472-n6811ens 232 11 - - HYPH cord-347472-n6811ens 232 12 off off NN cord-347472-n6811ens 232 13 problem problem NN cord-347472-n6811ens 232 14 with with IN cord-347472-n6811ens 232 15 extraction extraction NN cord-347472-n6811ens 232 16 , , , cord-347472-n6811ens 232 17 or or CC cord-347472-n6811ens 232 18 shaky shaky JJ cord-347472-n6811ens 232 19 hands hand NNS cord-347472-n6811ens 232 20 at at IN cord-347472-n6811ens 232 21 the the DT cord-347472-n6811ens 232 22 end end NN cord-347472-n6811ens 232 23 of of IN cord-347472-n6811ens 232 24 a a DT cord-347472-n6811ens 232 25 shift shift NN cord-347472-n6811ens 232 26 , , , cord-347472-n6811ens 232 27 excess excess JJ cord-347472-n6811ens 232 28 viral viral JJ cord-347472-n6811ens 232 29 transport transport NN cord-347472-n6811ens 232 30 media medium NNS cord-347472-n6811ens 232 31 could could MD cord-347472-n6811ens 232 32 be be VB cord-347472-n6811ens 232 33 re re VBN cord-347472-n6811ens 232 34 - - VBN cord-347472-n6811ens 232 35 extracted extract VBN cord-347472-n6811ens 233 1 and and CC cord-347472-n6811ens 233 2 re re NNS cord-347472-n6811ens 233 3 - - VBN cord-347472-n6811ens 233 4 tested test VBN cord-347472-n6811ens 233 5 before before IN cord-347472-n6811ens 233 6 recalling recall VBG cord-347472-n6811ens 233 7 a a DT cord-347472-n6811ens 233 8 patient patient NN cord-347472-n6811ens 233 9 into into IN cord-347472-n6811ens 233 10 the the DT cord-347472-n6811ens 233 11 health health NN cord-347472-n6811ens 233 12 care care NN cord-347472-n6811ens 233 13 setting set VBG cord-347472-n6811ens 233 14 for for IN cord-347472-n6811ens 233 15 a a DT cord-347472-n6811ens 233 16 re re NN cord-347472-n6811ens 233 17 - - NN cord-347472-n6811ens 233 18 swabbing swabbing NN cord-347472-n6811ens 233 19 . . . cord-347472-n6811ens 234 1 Why why WRB cord-347472-n6811ens 234 2 change change VB cord-347472-n6811ens 234 3 the the DT cord-347472-n6811ens 234 4 assay assay NN cord-347472-n6811ens 234 5 when when WRB cord-347472-n6811ens 234 6 one one PRP cord-347472-n6811ens 234 7 could could MD cord-347472-n6811ens 234 8 fix fix VB cord-347472-n6811ens 234 9 the the DT cord-347472-n6811ens 234 10 input input NN cord-347472-n6811ens 234 11 ? ? . cord-347472-n6811ens 235 1 Although although IN cord-347472-n6811ens 235 2 a a DT cord-347472-n6811ens 235 3 re re NN cord-347472-n6811ens 235 4 - - JJ cord-347472-n6811ens 235 5 designed design VBN cord-347472-n6811ens 235 6 transcript transcript NN cord-347472-n6811ens 235 7 - - HYPH cord-347472-n6811ens 235 8 specific specific JJ cord-347472-n6811ens 235 9 control control NN cord-347472-n6811ens 235 10 eliminates eliminate VBZ cord-347472-n6811ens 235 11 the the DT cord-347472-n6811ens 235 12 false false JJ cord-347472-n6811ens 235 13 negative negative JJ cord-347472-n6811ens 235 14 potential potential NN cord-347472-n6811ens 235 15 described describe VBN cord-347472-n6811ens 235 16 here here RB cord-347472-n6811ens 235 17 , , , cord-347472-n6811ens 235 18 approaches approach VBZ cord-347472-n6811ens 235 19 to to TO cord-347472-n6811ens 235 20 make make VB cord-347472-n6811ens 235 21 best good JJS cord-347472-n6811ens 235 22 use use NN cord-347472-n6811ens 235 23 of of IN cord-347472-n6811ens 235 24 the the DT cord-347472-n6811ens 235 25 current current JJ cord-347472-n6811ens 235 26 reagent reagent NN cord-347472-n6811ens 235 27 will will MD cord-347472-n6811ens 235 28 likely likely RB cord-347472-n6811ens 235 29 be be VB cord-347472-n6811ens 235 30 proposed propose VBN cord-347472-n6811ens 235 31 . . . cord-347472-n6811ens 236 1 One one CD cord-347472-n6811ens 236 2 potential potential JJ cord-347472-n6811ens 236 3 alternative alternative NN cord-347472-n6811ens 236 4 to to TO cord-347472-n6811ens 236 5 eliminate eliminate VB cord-347472-n6811ens 236 6 confounding confounding JJ cord-347472-n6811ens 236 7 genomic genomic JJ cord-347472-n6811ens 236 8 DNA dna NN cord-347472-n6811ens 236 9 is be VBZ cord-347472-n6811ens 236 10 to to TO cord-347472-n6811ens 236 11 digest digest VB cord-347472-n6811ens 236 12 extracted extract VBN cord-347472-n6811ens 236 13 samples sample NNS cord-347472-n6811ens 236 14 with with IN cord-347472-n6811ens 236 15 deoxyribonuclease deoxyribonuclease NN cord-347472-n6811ens 236 16 ( ( -LRB- cord-347472-n6811ens 236 17 DNase DNase NNP cord-347472-n6811ens 236 18 ) ) -RRB- cord-347472-n6811ens 236 19 . . . cord-347472-n6811ens 237 1 This this DT cord-347472-n6811ens 237 2 should should MD cord-347472-n6811ens 237 3 be be VB cord-347472-n6811ens 237 4 avoided avoid VBN cord-347472-n6811ens 237 5 . . . cord-347472-n6811ens 238 1 This this DT cord-347472-n6811ens 238 2 approach approach NN cord-347472-n6811ens 238 3 is be VBZ cord-347472-n6811ens 238 4 expensive expensive JJ cord-347472-n6811ens 238 5 ( ( -LRB- cord-347472-n6811ens 238 6 far far RB cord-347472-n6811ens 238 7 more more JJR cord-347472-n6811ens 238 8 than than IN cord-347472-n6811ens 238 9 a a DT cord-347472-n6811ens 238 10 re re NN cord-347472-n6811ens 238 11 - - JJ cord-347472-n6811ens 238 12 designed design VBN cord-347472-n6811ens 238 13 primer primer NN cord-347472-n6811ens 238 14 ) ) -RRB- cord-347472-n6811ens 238 15 , , , cord-347472-n6811ens 238 16 requires require VBZ cord-347472-n6811ens 238 17 addition addition NN cord-347472-n6811ens 238 18 of of IN cord-347472-n6811ens 238 19 divalent divalent JJ cord-347472-n6811ens 238 20 cations cation NNS cord-347472-n6811ens 238 21 that that WDT cord-347472-n6811ens 238 22 can can MD cord-347472-n6811ens 238 23 interfere interfere VB cord-347472-n6811ens 238 24 with with IN cord-347472-n6811ens 238 25 downstream downstream JJ cord-347472-n6811ens 238 26 reverse reverse NN cord-347472-n6811ens 238 27 transcription transcription NN cord-347472-n6811ens 238 28 and and CC cord-347472-n6811ens 238 29 PCR PCR NNP cord-347472-n6811ens 238 30 , , , cord-347472-n6811ens 238 31 and and CC cord-347472-n6811ens 238 32 is be VBZ cord-347472-n6811ens 238 33 imperfect imperfect JJ cord-347472-n6811ens 238 34 : : : cord-347472-n6811ens 238 35 DNA DNA NNP cord-347472-n6811ens 238 36 has have VBZ cord-347472-n6811ens 238 37 evolved evolve VBN cord-347472-n6811ens 238 38 to to TO cord-347472-n6811ens 238 39 be be VB cord-347472-n6811ens 238 40 more more RBR cord-347472-n6811ens 238 41 physically physically RB cord-347472-n6811ens 238 42 robust robust JJ cord-347472-n6811ens 238 43 than than IN cord-347472-n6811ens 238 44 RNA RNA NNP cord-347472-n6811ens 238 45 . . . cord-347472-n6811ens 239 1 As as IN cord-347472-n6811ens 239 2 shown show VBN cord-347472-n6811ens 239 3 above above RB cord-347472-n6811ens 239 4 and and CC cord-347472-n6811ens 239 5 in in IN cord-347472-n6811ens 239 6 many many JJ cord-347472-n6811ens 239 7 other other JJ cord-347472-n6811ens 239 8 contexts contexts NN cord-347472-n6811ens 239 9 , , , cord-347472-n6811ens 239 10 exponential exponential JJ cord-347472-n6811ens 239 11 amplification amplification NN cord-347472-n6811ens 239 12 during during IN cord-347472-n6811ens 239 13 PCR PCR NNP cord-347472-n6811ens 239 14 generates generate VBZ cord-347472-n6811ens 239 15 detectable detectable JJ cord-347472-n6811ens 239 16 signals signal NNS cord-347472-n6811ens 239 17 from from IN cord-347472-n6811ens 239 18 single single JJ cord-347472-n6811ens 239 19 - - HYPH cord-347472-n6811ens 239 20 digit digit NN cord-347472-n6811ens 239 21 copies copy NNS cord-347472-n6811ens 239 22 of of IN cord-347472-n6811ens 239 23 template template NN cord-347472-n6811ens 239 24 . . . cord-347472-n6811ens 240 1 Even even RB cord-347472-n6811ens 240 2 commercial commercial JJ cord-347472-n6811ens 240 3 offerings offering NNS cord-347472-n6811ens 240 4 " " '' cord-347472-n6811ens 240 5 reference reference NN cord-347472-n6811ens 240 6 RNA rna NN cord-347472-n6811ens 240 7 " " '' cord-347472-n6811ens 240 8 can can MD cord-347472-n6811ens 240 9 be be VB cord-347472-n6811ens 240 10 contaminated contaminate VBN cord-347472-n6811ens 240 11 with with IN cord-347472-n6811ens 240 12 low low JJ cord-347472-n6811ens 240 13 , , , cord-347472-n6811ens 240 14 but but CC cord-347472-n6811ens 240 15 interfering interfering JJ cord-347472-n6811ens 240 16 , , , cord-347472-n6811ens 240 17 levels level NNS cord-347472-n6811ens 240 18 of of IN cord-347472-n6811ens 240 19 human human JJ cord-347472-n6811ens 240 20 DNA dna NN cord-347472-n6811ens 240 21 . . . cord-347472-n6811ens 241 1 Quantigene Quantigene NNP cord-347472-n6811ens 241 2 human human JJ cord-347472-n6811ens 241 3 reference reference NN cord-347472-n6811ens 241 4 RNA RNA NNP cord-347472-n6811ens 241 5 ( ( -LRB- cord-347472-n6811ens 241 6 Life Life NNP cord-347472-n6811ens 241 7 Technologies Technologies NNPS cord-347472-n6811ens 241 8 ) ) -RRB- cord-347472-n6811ens 241 9 is be VBZ cord-347472-n6811ens 241 10 specified specify VBN cord-347472-n6811ens 241 11 as as IN cord-347472-n6811ens 241 12 a a DT cord-347472-n6811ens 241 13 mixture mixture NN cord-347472-n6811ens 241 14 of of IN cord-347472-n6811ens 241 15 DNasetreated dnasetreated JJ cord-347472-n6811ens 241 16 RNAs rna NNS cord-347472-n6811ens 241 17 from from IN cord-347472-n6811ens 241 18 multiple multiple JJ cord-347472-n6811ens 241 19 cell cell NN cord-347472-n6811ens 241 20 lines line NNS cord-347472-n6811ens 241 21 . . . cord-347472-n6811ens 242 1 In in IN cord-347472-n6811ens 242 2 practice practice NN cord-347472-n6811ens 242 3 , , , cord-347472-n6811ens 242 4 this this DT cord-347472-n6811ens 242 5 material material NN cord-347472-n6811ens 242 6 continues continue VBZ cord-347472-n6811ens 242 7 to to TO cord-347472-n6811ens 242 8 generate generate VB cord-347472-n6811ens 242 9 qPCR qpcr NN cord-347472-n6811ens 242 10 signals signal NNS cord-347472-n6811ens 242 11 both both DT cord-347472-n6811ens 242 12 using use VBG cord-347472-n6811ens 242 13 a a DT cord-347472-n6811ens 242 14 Taq taq NN cord-347472-n6811ens 242 15 - - HYPH cord-347472-n6811ens 242 16 only only RB cord-347472-n6811ens 242 17 , , , cord-347472-n6811ens 242 18 non non JJ cord-347472-n6811ens 242 19 - - JJ cord-347472-n6811ens 242 20 reverse reverse JJ cord-347472-n6811ens 242 21 transcribing transcribing NN cord-347472-n6811ens 242 22 , , , cord-347472-n6811ens 242 23 mastermix mastermix NNP cord-347472-n6811ens 242 24 and and CC cord-347472-n6811ens 242 25 a a DT cord-347472-n6811ens 242 26 one one CD cord-347472-n6811ens 242 27 - - HYPH cord-347472-n6811ens 242 28 step step NN cord-347472-n6811ens 242 29 RT RT NNP cord-347472-n6811ens 242 30 - - HYPH cord-347472-n6811ens 242 31 PCR PCR NNP cord-347472-n6811ens 242 32 mix mix NN cord-347472-n6811ens 242 33 following follow VBG cord-347472-n6811ens 242 34 RNase RNase NNP cord-347472-n6811ens 242 35 A a DT cord-347472-n6811ens 242 36 treatment treatment NN cord-347472-n6811ens 242 37 ( ( -LRB- cord-347472-n6811ens 242 38 Figs fig NNS cord-347472-n6811ens 242 39 . . . cord-347472-n6811ens 242 40 3 3 CD cord-347472-n6811ens 242 41 and and CC cord-347472-n6811ens 242 42 S2 S2 NNP cord-347472-n6811ens 242 43 ) ) -RRB- cord-347472-n6811ens 242 44 . . . cord-347472-n6811ens 243 1 Ct Ct NNP cord-347472-n6811ens 243 2 is be VBZ cord-347472-n6811ens 243 3 a a DT cord-347472-n6811ens 243 4 unitless unitless JJ cord-347472-n6811ens 243 5 measurement measurement NN cord-347472-n6811ens 243 6 and and CC cord-347472-n6811ens 243 7 should should MD cord-347472-n6811ens 243 8 be be VB cord-347472-n6811ens 243 9 used use VBN cord-347472-n6811ens 243 10 with with IN cord-347472-n6811ens 243 11 care care NN cord-347472-n6811ens 243 12 when when WRB cord-347472-n6811ens 243 13 discussing discuss VBG cord-347472-n6811ens 243 14 quantity quantity NN cord-347472-n6811ens 243 15 . . . cord-347472-n6811ens 243 16 . . . cord-347472-n6811ens 244 1 qPCR qPCR NNP cord-347472-n6811ens 244 2 is be VBZ cord-347472-n6811ens 244 3 able able JJ cord-347472-n6811ens 244 4 to to TO cord-347472-n6811ens 244 5 operate operate VB cord-347472-n6811ens 244 6 in in IN cord-347472-n6811ens 244 7 qualitative qualitative JJ cord-347472-n6811ens 244 8 , , , cord-347472-n6811ens 244 9 semi semi JJ cord-347472-n6811ens 244 10 - - JJ cord-347472-n6811ens 244 11 quantitative quantitative JJ cord-347472-n6811ens 244 12 , , , cord-347472-n6811ens 244 13 or or CC cord-347472-n6811ens 244 14 fully fully RB cord-347472-n6811ens 244 15 quantitative quantitative JJ cord-347472-n6811ens 244 16 modes mode NNS cord-347472-n6811ens 244 17 , , , cord-347472-n6811ens 244 18 depending depend VBG cord-347472-n6811ens 244 19 on on IN cord-347472-n6811ens 244 20 assay assay NN cord-347472-n6811ens 244 21 design design NN cord-347472-n6811ens 244 22 . . . cord-347472-n6811ens 245 1 Currently currently RB cord-347472-n6811ens 245 2 deployed deploy VBN cord-347472-n6811ens 245 3 assays assay NNS cord-347472-n6811ens 245 4 are be VBP cord-347472-n6811ens 245 5 effectively effectively RB cord-347472-n6811ens 245 6 qualitative qualitative JJ cord-347472-n6811ens 246 1 ( ( -LRB- cord-347472-n6811ens 246 2 Yes yes UH cord-347472-n6811ens 246 3 / / , cord-347472-n6811ens 246 4 no no UH cord-347472-n6811ens 246 5 . . . cord-347472-n6811ens 247 1 Above above IN cord-347472-n6811ens 247 2 or or CC cord-347472-n6811ens 247 3 below below IN cord-347472-n6811ens 247 4 acceptable acceptable JJ cord-347472-n6811ens 247 5 Ct Ct NNP cord-347472-n6811ens 247 6 ) ) -RRB- cord-347472-n6811ens 247 7 . . . cord-347472-n6811ens 248 1 Throughout throughout IN cord-347472-n6811ens 248 2 this this DT cord-347472-n6811ens 248 3 manuscript manuscript NN cord-347472-n6811ens 248 4 , , , cord-347472-n6811ens 248 5 absolute absolute JJ cord-347472-n6811ens 248 6 Ct ct JJ cord-347472-n6811ens 248 7 values value NNS cord-347472-n6811ens 248 8 and and CC cord-347472-n6811ens 248 9 difference difference NN cord-347472-n6811ens 248 10 in in IN cord-347472-n6811ens 248 11 Ct Ct NNP cord-347472-n6811ens 248 12 between between IN cord-347472-n6811ens 248 13 samples sample NNS cord-347472-n6811ens 248 14 are be VBP cord-347472-n6811ens 248 15 used use VBN cord-347472-n6811ens 248 16 as as IN cord-347472-n6811ens 248 17 a a DT cord-347472-n6811ens 248 18 proxy proxy NN cord-347472-n6811ens 248 19 of of IN cord-347472-n6811ens 248 20 inverse(log2 inverse(log2 NNP cord-347472-n6811ens 248 21 ) ) -RRB- cord-347472-n6811ens 248 22 amount amount NN cord-347472-n6811ens 248 23 of of IN cord-347472-n6811ens 248 24 input input NN cord-347472-n6811ens 248 25 material material NN cord-347472-n6811ens 248 26 or or CC cord-347472-n6811ens 248 27 differences difference NNS cord-347472-n6811ens 248 28 thereof thereof RB cord-347472-n6811ens 248 29 between between IN cord-347472-n6811ens 248 30 samples sample NNS cord-347472-n6811ens 248 31 . . . cord-347472-n6811ens 249 1 Comparisons comparison NNS cord-347472-n6811ens 249 2 are be VBP cord-347472-n6811ens 249 3 restricted restrict VBN cord-347472-n6811ens 249 4 to to IN cord-347472-n6811ens 249 5 same same JJ cord-347472-n6811ens 249 6 - - HYPH cord-347472-n6811ens 249 7 probe probe NN cord-347472-n6811ens 249 8 , , , cord-347472-n6811ens 249 9 same same JJ cord-347472-n6811ens 249 10 - - HYPH cord-347472-n6811ens 249 11 instrument instrument NN cord-347472-n6811ens 249 12 , , , cord-347472-n6811ens 249 13 same same JJ cord-347472-n6811ens 249 14 ( ( -LRB- cord-347472-n6811ens 249 15 or or CC cord-347472-n6811ens 249 16 similar similar JJ cord-347472-n6811ens 249 17 ) ) -RRB- cord-347472-n6811ens 249 18 reagent reagent NN cord-347472-n6811ens 249 19 . . . cord-347472-n6811ens 250 1 Calibration calibration NN cord-347472-n6811ens 250 2 of of IN cord-347472-n6811ens 250 3 Ct:[nucleic Ct:[nucleic NNP cord-347472-n6811ens 250 4 acid acid NN cord-347472-n6811ens 250 5 ] ] -RRB- cord-347472-n6811ens 250 6 was be VBD cord-347472-n6811ens 250 7 performed perform VBN cord-347472-n6811ens 250 8 using use VBG cord-347472-n6811ens 250 9 dilutions dilution NNS cord-347472-n6811ens 250 10 of of IN cord-347472-n6811ens 250 11 commercial commercial JJ cord-347472-n6811ens 250 12 standards standard NNS cord-347472-n6811ens 250 13 . . . cord-347472-n6811ens 251 1 An an DT cord-347472-n6811ens 251 2 exception exception NN cord-347472-n6811ens 251 3 to to IN cord-347472-n6811ens 251 4 this this DT cord-347472-n6811ens 251 5 conservative conservative JJ cord-347472-n6811ens 251 6 approach approach NN cord-347472-n6811ens 251 7 is be VBZ cord-347472-n6811ens 251 8 the the DT cord-347472-n6811ens 251 9 use use NN cord-347472-n6811ens 251 10 of of IN cord-347472-n6811ens 251 11 the the DT cord-347472-n6811ens 251 12 " " `` cord-347472-n6811ens 251 13 40 40 CD cord-347472-n6811ens 251 14 cycle cycle NN cord-347472-n6811ens 251 15 " " '' cord-347472-n6811ens 251 16 threshold threshold NN cord-347472-n6811ens 251 17 specified specify VBN cord-347472-n6811ens 251 18 in in IN cord-347472-n6811ens 251 19 the the DT cord-347472-n6811ens 251 20 CDC CDC NNP cord-347472-n6811ens 251 21 EUA EUA NNP cord-347472-n6811ens 251 22 . . . cord-347472-n6811ens 252 1 Our -PRON- PRP$ cord-347472-n6811ens 252 2 results result NNS cord-347472-n6811ens 252 3 err err VBP cord-347472-n6811ens 252 4 on on IN cord-347472-n6811ens 252 5 the the DT cord-347472-n6811ens 252 6 side side NN cord-347472-n6811ens 252 7 of of IN cord-347472-n6811ens 252 8 underestimating underestimate VBG cord-347472-n6811ens 252 9 the the DT cord-347472-n6811ens 252 10 extreme extreme JJ cord-347472-n6811ens 252 11 sensitivity sensitivity NN cord-347472-n6811ens 252 12 of of IN cord-347472-n6811ens 252 13 the the DT cord-347472-n6811ens 252 14 primary primary JJ cord-347472-n6811ens 252 15 CDC CDC NNP cord-347472-n6811ens 252 16 design design NN cord-347472-n6811ens 252 17 . . . cord-347472-n6811ens 253 1 The the DT cord-347472-n6811ens 253 2 Applied Applied NNP cord-347472-n6811ens 253 3 Biosystems Biosystems NNP cord-347472-n6811ens 253 4 Viia7 Viia7 NNP cord-347472-n6811ens 253 5 384w 384w CD cord-347472-n6811ens 253 6 instrument instrument NN cord-347472-n6811ens 253 7 used use VBN cord-347472-n6811ens 253 8 here here RB cord-347472-n6811ens 253 9 is be VBZ cord-347472-n6811ens 253 10 moderately moderately RB cord-347472-n6811ens 253 11 less less RBR cord-347472-n6811ens 253 12 sensitive sensitive JJ cord-347472-n6811ens 253 13 ( ( -LRB- cord-347472-n6811ens 253 14 higher high JJR cord-347472-n6811ens 253 15 Ct Ct NNP cord-347472-n6811ens 253 16 ) ) -RRB- cord-347472-n6811ens 253 17 for for IN cord-347472-n6811ens 253 18 a a DT cord-347472-n6811ens 253 19 given give VBN cord-347472-n6811ens 253 20 reaction reaction NN cord-347472-n6811ens 253 21 composition composition NN cord-347472-n6811ens 253 22 and and CC cord-347472-n6811ens 253 23 volume volume NN cord-347472-n6811ens 253 24 than than IN cord-347472-n6811ens 253 25 a a DT cord-347472-n6811ens 253 26 96w 96w CD cord-347472-n6811ens 253 27 FAST fast JJ cord-347472-n6811ens 253 28 reaction reaction NN cord-347472-n6811ens 253 29 block block NN cord-347472-n6811ens 253 30 in in IN cord-347472-n6811ens 253 31 the the DT cord-347472-n6811ens 253 32 same same JJ cord-347472-n6811ens 253 33 instrument instrument NN cord-347472-n6811ens 253 34 ( ( -LRB- cord-347472-n6811ens 253 35 information information NN cord-347472-n6811ens 253 36 obtained obtain VBN cord-347472-n6811ens 253 37 from from IN cord-347472-n6811ens 253 38 Life Life NNP cord-347472-n6811ens 253 39 Technologies Technologies NNP cord-347472-n6811ens 253 40 technical technical JJ cord-347472-n6811ens 253 41 support support NN cord-347472-n6811ens 253 42 , , , cord-347472-n6811ens 253 43 2020/05 2020/05 CD cord-347472-n6811ens 253 44 ) ) -RRB- cord-347472-n6811ens 253 45 . . . cord-347472-n6811ens 254 1 For for IN cord-347472-n6811ens 254 2 a a DT cord-347472-n6811ens 254 3 representative representative JJ cord-347472-n6811ens 254 4 instrument instrument NN cord-347472-n6811ens 254 5 , , , cord-347472-n6811ens 254 6 the the DT cord-347472-n6811ens 254 7 96w 96w CD cord-347472-n6811ens 254 8 FAST FAST NNP cord-347472-n6811ens 254 9 block block NN cord-347472-n6811ens 254 10 Ct Ct NNP cord-347472-n6811ens 254 11 was be VBD cord-347472-n6811ens 254 12 approximately approximately RB cord-347472-n6811ens 254 13 0.6 0.6 CD cord-347472-n6811ens 254 14 cycles cycle NNS cord-347472-n6811ens 254 15 lower lower RBR cord-347472-n6811ens 254 16 across across IN cord-347472-n6811ens 254 17 the the DT cord-347472-n6811ens 254 18 dilution dilution NN cord-347472-n6811ens 254 19 range range NN cord-347472-n6811ens 254 20 . . . cord-347472-n6811ens 255 1 Assays assay NNS cord-347472-n6811ens 255 2 should should MD cord-347472-n6811ens 255 3 be be VB cord-347472-n6811ens 255 4 improved improve VBN cord-347472-n6811ens 255 5 when when WRB cord-347472-n6811ens 255 6 feasible feasible JJ cord-347472-n6811ens 255 7 , , , cord-347472-n6811ens 255 8 not not RB cord-347472-n6811ens 255 9 rubber rubber NN cord-347472-n6811ens 255 10 - - HYPH cord-347472-n6811ens 255 11 stamped stamp VBN cord-347472-n6811ens 255 12 and and CC cord-347472-n6811ens 255 13 set set VBN cord-347472-n6811ens 255 14 in in IN cord-347472-n6811ens 255 15 stone stone NN cord-347472-n6811ens 255 16 . . . cord-347472-n6811ens 256 1 I -PRON- PRP cord-347472-n6811ens 256 2 alerted alert VBD cord-347472-n6811ens 256 3 CDC CDC NNP cord-347472-n6811ens 256 4 that that IN cord-347472-n6811ens 256 5 their -PRON- PRP$ cord-347472-n6811ens 256 6 EUA EUA NNP cord-347472-n6811ens 256 7 - - HYPH cord-347472-n6811ens 256 8 specified specify VBN cord-347472-n6811ens 256 9 suffered suffer VBD cord-347472-n6811ens 256 10 from from IN cord-347472-n6811ens 256 11 a a DT cord-347472-n6811ens 256 12 potential potential JJ cord-347472-n6811ens 256 13 false false JJ cord-347472-n6811ens 256 14 - - HYPH cord-347472-n6811ens 256 15 negative negative JJ cord-347472-n6811ens 256 16 on on IN cord-347472-n6811ens 256 17 March March NNP cord-347472-n6811ens 256 18 20 20 CD cord-347472-n6811ens 256 19 , , , cord-347472-n6811ens 256 20 2020 2020 CD cord-347472-n6811ens 256 21 ( ( -LRB- cord-347472-n6811ens 256 22 attached attach VBN cord-347472-n6811ens 256 23 below below RB cord-347472-n6811ens 256 24 ) ) -RRB- cord-347472-n6811ens 256 25 . . . cord-347472-n6811ens 257 1 Their -PRON- PRP$ cord-347472-n6811ens 257 2 response response NN cord-347472-n6811ens 257 3 , , , cord-347472-n6811ens 257 4 sent send VBD cord-347472-n6811ens 257 5 thirty thirty CD cord-347472-n6811ens 257 6 - - HYPH cord-347472-n6811ens 257 7 six six CD cord-347472-n6811ens 257 8 days day NNS cord-347472-n6811ens 257 9 later later RB cord-347472-n6811ens 257 10 ( ( -LRB- cord-347472-n6811ens 257 11 also also RB cord-347472-n6811ens 257 12 attached attach VBN cord-347472-n6811ens 257 13 ) ) -RRB- cord-347472-n6811ens 257 14 , , , cord-347472-n6811ens 257 15 dismissed dismiss VBD cord-347472-n6811ens 257 16 my -PRON- PRP$ cord-347472-n6811ens 257 17 concerns concern NNS cord-347472-n6811ens 257 18 at at IN cord-347472-n6811ens 257 19 multiple multiple JJ cord-347472-n6811ens 257 20 levels level NNS cord-347472-n6811ens 257 21 . . . cord-347472-n6811ens 258 1 One one CD cord-347472-n6811ens 258 2 : : : cord-347472-n6811ens 258 3 there there EX cord-347472-n6811ens 258 4 had have VBD cord-347472-n6811ens 258 5 not not RB cord-347472-n6811ens 258 6 been be VBN cord-347472-n6811ens 258 7 widespread widespread JJ cord-347472-n6811ens 258 8 reporting reporting NN cord-347472-n6811ens 258 9 of of IN cord-347472-n6811ens 258 10 false false JJ cord-347472-n6811ens 258 11 negatives negative NNS cord-347472-n6811ens 258 12 from from IN cord-347472-n6811ens 258 13 this this DT cord-347472-n6811ens 258 14 test test NN cord-347472-n6811ens 258 15 . . . cord-347472-n6811ens 259 1 Two two CD cord-347472-n6811ens 259 2 : : : cord-347472-n6811ens 259 3 CDC CDC NNP cord-347472-n6811ens 259 4 's 's POS cord-347472-n6811ens 259 5 clinical clinical JJ cord-347472-n6811ens 259 6 algorithms algorithm NNS cord-347472-n6811ens 259 7 state state NN cord-347472-n6811ens 259 8 that that IN cord-347472-n6811ens 259 9 negative negative JJ cord-347472-n6811ens 259 10 - - HYPH cord-347472-n6811ens 259 11 testing testing NN cord-347472-n6811ens 259 12 patients patient NNS cord-347472-n6811ens 259 13 should should MD cord-347472-n6811ens 259 14 be be VB cord-347472-n6811ens 259 15 retested reteste VBN cord-347472-n6811ens 259 16 and and CC cord-347472-n6811ens 259 17 that that IN cord-347472-n6811ens 259 18 clinical clinical JJ cord-347472-n6811ens 259 19 management management NN cord-347472-n6811ens 259 20 should should MD cord-347472-n6811ens 259 21 not not RB cord-347472-n6811ens 259 22 rely rely VB cord-347472-n6811ens 259 23 solely solely RB cord-347472-n6811ens 259 24 on on IN cord-347472-n6811ens 259 25 this this DT cord-347472-n6811ens 259 26 test test NN cord-347472-n6811ens 259 27 . . . cord-347472-n6811ens 260 1 Three three CD cord-347472-n6811ens 260 2 : : : cord-347472-n6811ens 260 3 the the DT cord-347472-n6811ens 260 4 FDA FDA NNP cord-347472-n6811ens 260 5 had have VBD cord-347472-n6811ens 260 6 approved approve VBN cord-347472-n6811ens 260 7 the the DT cord-347472-n6811ens 260 8 test test NN cord-347472-n6811ens 260 9 , , , cord-347472-n6811ens 260 10 making make VBG cord-347472-n6811ens 260 11 it -PRON- PRP cord-347472-n6811ens 260 12 , , , cord-347472-n6811ens 260 13 de de FW cord-347472-n6811ens 260 14 jure jure NNP cord-347472-n6811ens 260 15 , , , cord-347472-n6811ens 260 16 acceptable acceptable JJ cord-347472-n6811ens 260 17 . . . cord-347472-n6811ens 261 1 Each each DT cord-347472-n6811ens 261 2 of of IN cord-347472-n6811ens 261 3 the the DT cord-347472-n6811ens 261 4 CDC CDC NNP cord-347472-n6811ens 261 5 's 's POS cord-347472-n6811ens 261 6 arguments argument NNS cord-347472-n6811ens 261 7 is be VBZ cord-347472-n6811ens 261 8 fallacious fallacious JJ cord-347472-n6811ens 261 9 . . . cord-347472-n6811ens 262 1 False false JJ cord-347472-n6811ens 262 2 negatives negative NNS cord-347472-n6811ens 262 3 are be VBP cord-347472-n6811ens 262 4 inherently inherently RB cord-347472-n6811ens 262 5 difficult difficult JJ cord-347472-n6811ens 262 6 to to TO cord-347472-n6811ens 262 7 catch catch VB cord-347472-n6811ens 262 8 , , , cord-347472-n6811ens 262 9 and and CC cord-347472-n6811ens 262 10 identification identification NN cord-347472-n6811ens 262 11 of of IN cord-347472-n6811ens 262 12 true true JJ cord-347472-n6811ens 262 13 positives positive NNS cord-347472-n6811ens 262 14 is be VBZ cord-347472-n6811ens 262 15 a a DT cord-347472-n6811ens 262 16 challenging challenge VBG cord-347472-n6811ens 262 17 bootstrap bootstrap NN cord-347472-n6811ens 262 18 problem problem NN cord-347472-n6811ens 262 19 . . . cord-347472-n6811ens 263 1 The the DT cord-347472-n6811ens 263 2 idea idea NN cord-347472-n6811ens 263 3 of of IN cord-347472-n6811ens 263 4 " " `` cord-347472-n6811ens 263 5 re re NN cord-347472-n6811ens 263 6 - - NN cord-347472-n6811ens 263 7 test test NN cord-347472-n6811ens 263 8 if if IN cord-347472-n6811ens 263 9 you -PRON- PRP cord-347472-n6811ens 263 10 're be VBP cord-347472-n6811ens 263 11 uncertain uncertain JJ cord-347472-n6811ens 263 12 " " '' cord-347472-n6811ens 263 13 is be VBZ cord-347472-n6811ens 263 14 tone tone NN cord-347472-n6811ens 263 15 deaf deaf JJ cord-347472-n6811ens 263 16 in in IN cord-347472-n6811ens 263 17 the the DT cord-347472-n6811ens 263 18 context context NN cord-347472-n6811ens 263 19 of of IN cord-347472-n6811ens 263 20 widespread widespread JJ cord-347472-n6811ens 263 21 shortages shortage NNS cord-347472-n6811ens 263 22 of of IN cord-347472-n6811ens 263 23 testing test VBG cord-347472-n6811ens 263 24 reagents reagent NNS cord-347472-n6811ens 263 25 and and CC cord-347472-n6811ens 263 26 long long JJ cord-347472-n6811ens 263 27 backlogs backlog NNS cord-347472-n6811ens 263 28 for for IN cord-347472-n6811ens 263 29 sample sample NN cord-347472-n6811ens 263 30 processing processing NN cord-347472-n6811ens 263 31 , , , cord-347472-n6811ens 263 32 not not RB cord-347472-n6811ens 263 33 to to TO cord-347472-n6811ens 263 34 mention mention VB cord-347472-n6811ens 263 35 the the DT cord-347472-n6811ens 263 36 moderately moderately RB cord-347472-n6811ens 263 37 invasive invasive JJ cord-347472-n6811ens 263 38 nature nature NN cord-347472-n6811ens 263 39 of of IN cord-347472-n6811ens 263 40 nasopharyngeal nasopharyngeal JJ cord-347472-n6811ens 263 41 sampling sampling NN cord-347472-n6811ens 263 42 . . . cord-347472-n6811ens 264 1 Appealing appeal VBG cord-347472-n6811ens 264 2 to to IN cord-347472-n6811ens 264 3 FDA FDA NNP cord-347472-n6811ens 264 4 's 's POS cord-347472-n6811ens 264 5 authority authority NN cord-347472-n6811ens 264 6 may may MD cord-347472-n6811ens 264 7 be be VB cord-347472-n6811ens 264 8 legally legally RB cord-347472-n6811ens 264 9 satisfying satisfying JJ cord-347472-n6811ens 264 10 , , , cord-347472-n6811ens 264 11 but but CC cord-347472-n6811ens 264 12 does do VBZ cord-347472-n6811ens 264 13 nothing nothing NN cord-347472-n6811ens 264 14 to to TO cord-347472-n6811ens 264 15 actually actually RB cord-347472-n6811ens 264 16 address address VB cord-347472-n6811ens 264 17 issues issue NNS cord-347472-n6811ens 264 18 of of IN cord-347472-n6811ens 264 19 scientific scientific JJ cord-347472-n6811ens 264 20 merit merit NN cord-347472-n6811ens 264 21 . . . cord-347472-n6811ens 265 1 We -PRON- PRP cord-347472-n6811ens 265 2 will will MD cord-347472-n6811ens 265 3 never never RB cord-347472-n6811ens 265 4 know know VB cord-347472-n6811ens 265 5 how how WRB cord-347472-n6811ens 265 6 many many JJ cord-347472-n6811ens 265 7 virus virus NN cord-347472-n6811ens 265 8 - - HYPH cord-347472-n6811ens 265 9 positive positive JJ cord-347472-n6811ens 265 10 patients patient NNS cord-347472-n6811ens 265 11 have have VBP cord-347472-n6811ens 265 12 been be VBN cord-347472-n6811ens 265 13 given give VBN cord-347472-n6811ens 265 14 what what WP cord-347472-n6811ens 265 15 amounts amount VBZ cord-347472-n6811ens 265 16 to to IN cord-347472-n6811ens 265 17 an an DT cord-347472-n6811ens 265 18 " " `` cord-347472-n6811ens 265 19 all all RB cord-347472-n6811ens 265 20 clear clear JJ cord-347472-n6811ens 265 21 " " '' cord-347472-n6811ens 265 22 due due JJ cord-347472-n6811ens 265 23 to to IN cord-347472-n6811ens 265 24 false false JJ cord-347472-n6811ens 265 25 - - HYPH cord-347472-n6811ens 265 26 negatives negative NNS cord-347472-n6811ens 265 27 generated generate VBN cord-347472-n6811ens 265 28 by by IN cord-347472-n6811ens 265 29 this this DT cord-347472-n6811ens 265 30 flawed flawed JJ cord-347472-n6811ens 265 31 control control NN cord-347472-n6811ens 265 32 design design NN cord-347472-n6811ens 265 33 . . . cord-347472-n6811ens 266 1 The the DT cord-347472-n6811ens 266 2 potential potential NN cord-347472-n6811ens 266 3 for for IN cord-347472-n6811ens 266 4 misdiagnosis misdiagnosis NN cord-347472-n6811ens 266 5 is be VBZ cord-347472-n6811ens 266 6 real real JJ cord-347472-n6811ens 266 7 , , , cord-347472-n6811ens 266 8 and and CC cord-347472-n6811ens 266 9 there there EX cord-347472-n6811ens 266 10 is be VBZ cord-347472-n6811ens 266 11 a a DT cord-347472-n6811ens 266 12 window window NN cord-347472-n6811ens 266 13 to to TO cord-347472-n6811ens 266 14 make make VB cord-347472-n6811ens 266 15 an an DT cord-347472-n6811ens 266 16 important important JJ cord-347472-n6811ens 266 17 assay assay NN cord-347472-n6811ens 266 18 work work NN cord-347472-n6811ens 266 19 as as IN cord-347472-n6811ens 266 20 it -PRON- PRP cord-347472-n6811ens 266 21 was be VBD cord-347472-n6811ens 266 22 intended intend VBN cord-347472-n6811ens 266 23 . . . cord-347472-n6811ens 267 1 The the DT cord-347472-n6811ens 267 2 alternative alternative NN cord-347472-n6811ens 267 3 would would MD cord-347472-n6811ens 267 4 be be VB cord-347472-n6811ens 267 5 for for IN cord-347472-n6811ens 267 6 CDC CDC NNP cord-347472-n6811ens 267 7 to to TO cord-347472-n6811ens 267 8 say say VB cord-347472-n6811ens 267 9 " " `` cord-347472-n6811ens 267 10 our -PRON- PRP$ cord-347472-n6811ens 267 11 test test NN cord-347472-n6811ens 267 12 does do VBZ cord-347472-n6811ens 267 13 n't not RB cord-347472-n6811ens 267 14 work work VB cord-347472-n6811ens 267 15 as as IN cord-347472-n6811ens 267 16 we -PRON- PRP cord-347472-n6811ens 267 17 intended intend VBD cord-347472-n6811ens 267 18 ; ; : cord-347472-n6811ens 267 19 if if IN cord-347472-n6811ens 267 20 you -PRON- PRP cord-347472-n6811ens 267 21 are be VBP cord-347472-n6811ens 267 22 worried worried JJ cord-347472-n6811ens 267 23 that that IN cord-347472-n6811ens 267 24 you -PRON- PRP cord-347472-n6811ens 267 25 're be VBP cord-347472-n6811ens 267 26 sick sick JJ cord-347472-n6811ens 267 27 and and CC cord-347472-n6811ens 267 28 your -PRON- PRP$ cord-347472-n6811ens 267 29 test test NN cord-347472-n6811ens 267 30 has have VBZ cord-347472-n6811ens 267 31 come come VBN cord-347472-n6811ens 267 32 back back RB cord-347472-n6811ens 267 33 negative negative JJ cord-347472-n6811ens 267 34 , , , cord-347472-n6811ens 267 35 come come VB cord-347472-n6811ens 267 36 back back RB cord-347472-n6811ens 267 37 and and CC cord-347472-n6811ens 267 38 be be VB cord-347472-n6811ens 267 39 tested test VBN cord-347472-n6811ens 267 40 again again RB cord-347472-n6811ens 267 41 until until IN cord-347472-n6811ens 267 42 your -PRON- PRP$ cord-347472-n6811ens 267 43 fears fear NNS cord-347472-n6811ens 267 44 are be VBP cord-347472-n6811ens 267 45 allayed allay VBN cord-347472-n6811ens 267 46 , , , cord-347472-n6811ens 267 47 or or CC cord-347472-n6811ens 267 48 you -PRON- PRP cord-347472-n6811ens 267 49 test test VBP cord-347472-n6811ens 267 50 positive positive JJ cord-347472-n6811ens 267 51 . . . cord-347472-n6811ens 268 1 " " `` cord-347472-n6811ens 268 2 Fixing fix VBG cord-347472-n6811ens 268 3 some some DT cord-347472-n6811ens 268 4 problems problem NNS cord-347472-n6811ens 268 5 is be VBZ cord-347472-n6811ens 268 6 difficult difficult JJ cord-347472-n6811ens 268 7 ; ; : cord-347472-n6811ens 268 8 others other NNS cord-347472-n6811ens 268 9 are be VBP cord-347472-n6811ens 268 10 difficult difficult JJ cord-347472-n6811ens 268 11 to to TO cord-347472-n6811ens 268 12 identify identify VB cord-347472-n6811ens 268 13 but but CC cord-347472-n6811ens 268 14 easy easy JJ cord-347472-n6811ens 268 15 to to TO cord-347472-n6811ens 268 16 remedy remedy VB cord-347472-n6811ens 268 17 once once RB cord-347472-n6811ens 268 18 found find VBN cord-347472-n6811ens 268 19 . . . cord-347472-n6811ens 269 1 As as IN cord-347472-n6811ens 269 2 shown show VBN cord-347472-n6811ens 269 3 here here RB cord-347472-n6811ens 269 4 , , , cord-347472-n6811ens 269 5 this this DT cord-347472-n6811ens 269 6 important important JJ cord-347472-n6811ens 269 7 assay assay NN cord-347472-n6811ens 269 8 can can MD cord-347472-n6811ens 269 9 be be VB cord-347472-n6811ens 269 10 made make VBN cord-347472-n6811ens 269 11 to to TO cord-347472-n6811ens 269 12 operate operate VB cord-347472-n6811ens 269 13 as as IN cord-347472-n6811ens 269 14 intended intend VBN cord-347472-n6811ens 269 15 by by IN cord-347472-n6811ens 269 16 a a DT cord-347472-n6811ens 269 17 re re NN cord-347472-n6811ens 269 18 - - NN cord-347472-n6811ens 269 19 manufacture manufacture NN cord-347472-n6811ens 269 20 of of IN cord-347472-n6811ens 269 21 a a DT cord-347472-n6811ens 269 22 single single JJ cord-347472-n6811ens 269 23 reagent reagent NN cord-347472-n6811ens 269 24 . . . cord-347472-n6811ens 270 1 A a DT cord-347472-n6811ens 270 2 B B NNP cord-347472-n6811ens 270 3 RNA RNA NNP cord-347472-n6811ens 270 4 , , , cord-347472-n6811ens 270 5 but but CC cord-347472-n6811ens 270 6 not not RB cord-347472-n6811ens 270 7 genomic genomic JJ cord-347472-n6811ens 270 8 DNA dna NN cord-347472-n6811ens 270 9 , , , cord-347472-n6811ens 270 10 is be VBZ cord-347472-n6811ens 270 11 a a DT cord-347472-n6811ens 270 12 productive productive JJ cord-347472-n6811ens 270 13 template template NN cord-347472-n6811ens 270 14 for for IN cord-347472-n6811ens 270 15 reverse reverse JJ cord-347472-n6811ens 270 16 - - HYPH cord-347472-n6811ens 270 17 transcription transcription NN cord-347472-n6811ens 270 18 - - HYPH cord-347472-n6811ens 270 19 qPCR qpcr NN cord-347472-n6811ens 270 20 amplification amplification NN cord-347472-n6811ens 270 21 using use VBG cord-347472-n6811ens 270 22 any any DT cord-347472-n6811ens 270 23 of of IN cord-347472-n6811ens 270 24 the the DT cord-347472-n6811ens 270 25 five five CD cord-347472-n6811ens 270 26 tested test VBN cord-347472-n6811ens 270 27 transcript transcript NN cord-347472-n6811ens 270 28 - - HYPH cord-347472-n6811ens 270 29 specific specific JJ cord-347472-n6811ens 270 30 RPP30 RPP30 NNP cord-347472-n6811ens 270 31 controls control NNS cord-347472-n6811ens 270 32 . . . cord-347472-n6811ens 271 1 One one CD cord-347472-n6811ens 271 2 - - HYPH cord-347472-n6811ens 271 3 step step NN cord-347472-n6811ens 271 4 RT RT NNP cord-347472-n6811ens 271 5 - - HYPH cord-347472-n6811ens 271 6 qPCR qPCR NNP cord-347472-n6811ens 271 7 was be VBD cord-347472-n6811ens 271 8 performed perform VBN cord-347472-n6811ens 271 9 with with IN cord-347472-n6811ens 271 10 the the DT cord-347472-n6811ens 271 11 same same JJ cord-347472-n6811ens 271 12 mastermix mastermix NN cord-347472-n6811ens 271 13 used use VBN cord-347472-n6811ens 271 14 for for IN cord-347472-n6811ens 271 15 clinical clinical JJ cord-347472-n6811ens 271 16 samples sample NNS cord-347472-n6811ens 271 17 across across IN cord-347472-n6811ens 271 18 a a DT cord-347472-n6811ens 271 19 2-fold 2-fold CD cord-347472-n6811ens 271 20 dilution dilution NN cord-347472-n6811ens 271 21 series series NN cord-347472-n6811ens 271 22 ( ( -LRB- cord-347472-n6811ens 271 23 Materials Materials NNPS cord-347472-n6811ens 271 24 and and CC cord-347472-n6811ens 271 25 Methods Methods NNPS cord-347472-n6811ens 271 26 ) ) -RRB- cord-347472-n6811ens 271 27 . . . cord-347472-n6811ens 272 1 As as IN cord-347472-n6811ens 272 2 expected expect VBN cord-347472-n6811ens 272 3 , , , cord-347472-n6811ens 272 4 pre pre JJ cord-347472-n6811ens 272 5 - - JJ cord-347472-n6811ens 272 6 pandemic pandemic JJ cord-347472-n6811ens 272 7 commercial commercial JJ cord-347472-n6811ens 272 8 reference reference NN cord-347472-n6811ens 272 9 RNA RNA NNP cord-347472-n6811ens 272 10 is be VBZ cord-347472-n6811ens 272 11 nonreactive nonreactive JJ cord-347472-n6811ens 272 12 to to IN cord-347472-n6811ens 272 13 the the DT cord-347472-n6811ens 272 14 SARS SARS NNP cord-347472-n6811ens 272 15 - - HYPH cord-347472-n6811ens 272 16 CoV-2 CoV-2 NNP cord-347472-n6811ens 272 17 primer primer NN cord-347472-n6811ens 272 18 / / SYM cord-347472-n6811ens 272 19 probe probe NN cord-347472-n6811ens 272 20 sets set NNS cord-347472-n6811ens 272 21 . . . cord-347472-n6811ens 273 1 All all DT cord-347472-n6811ens 273 2 six six CD cord-347472-n6811ens 273 3 primer primer NN cord-347472-n6811ens 273 4 / / SYM cord-347472-n6811ens 273 5 probe probe NN cord-347472-n6811ens 273 6 sets set NNS cord-347472-n6811ens 273 7 targeting target VBG cord-347472-n6811ens 273 8 RPP30 rpp30 TO cord-347472-n6811ens 273 9 show show VB cord-347472-n6811ens 273 10 a a DT cord-347472-n6811ens 273 11 strong strong JJ cord-347472-n6811ens 273 12 and and CC cord-347472-n6811ens 273 13 relatively relatively RB cord-347472-n6811ens 273 14 linear linear JJ cord-347472-n6811ens 273 15 signal signal NN cord-347472-n6811ens 273 16 across across IN cord-347472-n6811ens 273 17 a a DT cord-347472-n6811ens 273 18 range range NN cord-347472-n6811ens 273 19 of of IN cord-347472-n6811ens 273 20 RNA RNA NNP cord-347472-n6811ens 273 21 input input NN cord-347472-n6811ens 273 22 ( ( -LRB- cord-347472-n6811ens 273 23 A a NN cord-347472-n6811ens 273 24 ) ) -RRB- cord-347472-n6811ens 273 25 ( ( -LRB- cord-347472-n6811ens 273 26 S1a s1a NN cord-347472-n6811ens 273 27 ) ) -RRB- cord-347472-n6811ens 273 28 . . . cord-347472-n6811ens 274 1 Using use VBG cord-347472-n6811ens 274 2 the the DT cord-347472-n6811ens 274 3 same same JJ cord-347472-n6811ens 274 4 reverse reverse NN cord-347472-n6811ens 274 5 - - HYPH cord-347472-n6811ens 274 6 transcriptase transcriptase NN cord-347472-n6811ens 274 7 containing contain VBG cord-347472-n6811ens 274 8 mastermix mastermix NNP cord-347472-n6811ens 274 9 with with IN cord-347472-n6811ens 274 10 mass mass JJ cord-347472-n6811ens 274 11 - - HYPH cord-347472-n6811ens 274 12 equivalent equivalent JJ cord-347472-n6811ens 274 13 dilutions dilution NNS cord-347472-n6811ens 274 14 of of IN cord-347472-n6811ens 274 15 RNA rna NN cord-347472-n6811ens 274 16 - - HYPH cord-347472-n6811ens 274 17 free free JJ cord-347472-n6811ens 274 18 genomic genomic JJ cord-347472-n6811ens 274 19 DNA dna NN cord-347472-n6811ens 274 20 input input NN cord-347472-n6811ens 274 21 , , , cord-347472-n6811ens 274 22 none none NN cord-347472-n6811ens 274 23 of of IN cord-347472-n6811ens 274 24 the the DT cord-347472-n6811ens 274 25 transcript transcript NN cord-347472-n6811ens 274 26 - - HYPH cord-347472-n6811ens 274 27 specific specific JJ cord-347472-n6811ens 274 28 probes probe NNS cord-347472-n6811ens 274 29 generated generate VBD cord-347472-n6811ens 274 30 a a DT cord-347472-n6811ens 274 31 qPCR qpcr NN cord-347472-n6811ens 274 32 signal signal NN cord-347472-n6811ens 274 33 , , , cord-347472-n6811ens 274 34 within within IN cord-347472-n6811ens 274 35 50 50 CD cord-347472-n6811ens 274 36 cycles cycle NNS cord-347472-n6811ens 274 37 , , , cord-347472-n6811ens 274 38 across across IN cord-347472-n6811ens 274 39 a a DT cord-347472-n6811ens 274 40 titration titration NN cord-347472-n6811ens 274 41 of of IN cord-347472-n6811ens 274 42 purified purify VBN cord-347472-n6811ens 274 43 DNA dna NN cord-347472-n6811ens 274 44 ranging range VBG cord-347472-n6811ens 274 45 from from IN cord-347472-n6811ens 274 46 20,000 20,000 CD cord-347472-n6811ens 274 47 copies copy NNS cord-347472-n6811ens 274 48 to to IN cord-347472-n6811ens 274 49 19.5 19.5 CD cord-347472-n6811ens 274 50 copies copy NNS cord-347472-n6811ens 274 51 / / SYM cord-347472-n6811ens 274 52 reaction reaction NN cord-347472-n6811ens 274 53 . . . cord-347472-n6811ens 275 1 ( ( -LRB- cord-347472-n6811ens 275 2 B b NN cord-347472-n6811ens 275 3 ) ) -RRB- cord-347472-n6811ens 276 1 The the DT cord-347472-n6811ens 276 2 CDC CDC NNP cord-347472-n6811ens 276 3 - - HYPH cord-347472-n6811ens 276 4 specified specify VBN cord-347472-n6811ens 276 5 RP RP NNP cord-347472-n6811ens 276 6 control control NN cord-347472-n6811ens 276 7 generates generate VBZ cord-347472-n6811ens 276 8 a a DT cord-347472-n6811ens 276 9 strong strong JJ cord-347472-n6811ens 276 10 signal signal NN cord-347472-n6811ens 276 11 from from IN cord-347472-n6811ens 276 12 genomic genomic JJ cord-347472-n6811ens 276 13 DNA dna NN cord-347472-n6811ens 276 14 . . . cord-347472-n6811ens 277 1 Reactions reaction NNS cord-347472-n6811ens 277 2 containing contain VBG cord-347472-n6811ens 277 3 64ng 64ng NN cord-347472-n6811ens 277 4 of of IN cord-347472-n6811ens 277 5 either either DT cord-347472-n6811ens 277 6 total total JJ cord-347472-n6811ens 277 7 RNA RNA NNP cord-347472-n6811ens 277 8 or or CC cord-347472-n6811ens 277 9 genomic genomic JJ cord-347472-n6811ens 277 10 DNA dna NN cord-347472-n6811ens 277 11 generated generate VBD cord-347472-n6811ens 277 12 a a DT cord-347472-n6811ens 277 13 ~3 ~3 JJ cord-347472-n6811ens 277 14 cycle cycle NN cord-347472-n6811ens 277 15 difference difference NN cord-347472-n6811ens 277 16 for for IN cord-347472-n6811ens 277 17 threshold threshold NN cord-347472-n6811ens 277 18 crossing crossing NN cord-347472-n6811ens 277 19 ( ( -LRB- cord-347472-n6811ens 277 20 Supplemental Supplemental NNP cord-347472-n6811ens 277 21 Text Text NNP cord-347472-n6811ens 277 22 ) ) -RRB- cord-347472-n6811ens 277 23 . . . cord-347472-n6811ens 278 1 Modest modest JJ cord-347472-n6811ens 278 2 baseline baseline NN cord-347472-n6811ens 278 3 and and CC cord-347472-n6811ens 278 4 NTC NTC NNP cord-347472-n6811ens 278 5 signal signal NN cord-347472-n6811ens 278 6 is be VBZ cord-347472-n6811ens 278 7 due due JJ cord-347472-n6811ens 278 8 to to IN cord-347472-n6811ens 278 9 offsetting offset VBG cord-347472-n6811ens 278 10 of of IN cord-347472-n6811ens 278 11 raw raw JJ cord-347472-n6811ens 278 12 qPCR qpcr NN cord-347472-n6811ens 278 13 signals signal NNS cord-347472-n6811ens 278 14 before before IN cord-347472-n6811ens 278 15 plotting plot VBG cord-347472-n6811ens 278 16 , , , cord-347472-n6811ens 278 17 as as IN cord-347472-n6811ens 278 18 described describe VBN cord-347472-n6811ens 278 19 in in IN cord-347472-n6811ens 278 20 Materials material NNS cord-347472-n6811ens 278 21 and and CC cord-347472-n6811ens 278 22 Methods method NNS cord-347472-n6811ens 278 23 . . . cord-347472-n6811ens 279 1 Positive positive JJ cord-347472-n6811ens 279 2 signal signal NN cord-347472-n6811ens 279 3 from from IN cord-347472-n6811ens 279 4 a a DT cord-347472-n6811ens 279 5 transcript transcript NN cord-347472-n6811ens 279 6 - - HYPH cord-347472-n6811ens 279 7 specific specific JJ cord-347472-n6811ens 279 8 RPP30 RPP30 NNP cord-347472-n6811ens 279 9 probe probe NN cord-347472-n6811ens 279 10 requires require VBZ cord-347472-n6811ens 279 11 both both CC cord-347472-n6811ens 279 12 RNA RNA NNP cord-347472-n6811ens 279 13 and and CC cord-347472-n6811ens 279 14 reverse reverse VB cord-347472-n6811ens 279 15 transcriptase transcriptase NN cord-347472-n6811ens 279 16 ( ( -LRB- cord-347472-n6811ens 279 17 RT RT NNP cord-347472-n6811ens 279 18 ) ) -RRB- cord-347472-n6811ens 279 19 . . . cord-347472-n6811ens 280 1 The the DT cord-347472-n6811ens 280 2 CDC CDC NNP cord-347472-n6811ens 280 3 - - HYPH cord-347472-n6811ens 280 4 specified specify VBN cord-347472-n6811ens 280 5 RP rp NN cord-347472-n6811ens 280 6 control control NN cord-347472-n6811ens 280 7 requires require VBZ cord-347472-n6811ens 280 8 neither neither CC cord-347472-n6811ens 280 9 RNA RNA NNP cord-347472-n6811ens 280 10 nor nor CC cord-347472-n6811ens 280 11 RT RT NNP cord-347472-n6811ens 280 12 when when WRB cord-347472-n6811ens 280 13 genomic genomic NN cord-347472-n6811ens 280 14 is be VBZ cord-347472-n6811ens 280 15 present present JJ cord-347472-n6811ens 280 16 . . . cord-347472-n6811ens 281 1 Dilutions dilution NNS cord-347472-n6811ens 281 2 of of IN cord-347472-n6811ens 281 3 either either DT cord-347472-n6811ens 281 4 commercial commercial JJ cord-347472-n6811ens 281 5 RNA RNA NNP cord-347472-n6811ens 281 6 or or CC cord-347472-n6811ens 281 7 DNA DNA NNP cord-347472-n6811ens 281 8 were be VBD cord-347472-n6811ens 281 9 used use VBN cord-347472-n6811ens 281 10 as as IN cord-347472-n6811ens 281 11 input input NN cord-347472-n6811ens 281 12 for for IN cord-347472-n6811ens 281 13 reactions reaction NNS cord-347472-n6811ens 281 14 containing contain VBG cord-347472-n6811ens 281 15 either either CC cord-347472-n6811ens 281 16 Viral Viral NNP cord-347472-n6811ens 281 17 One one CD cord-347472-n6811ens 281 18 - - HYPH cord-347472-n6811ens 281 19 step step NN cord-347472-n6811ens 281 20 RT RT NNP cord-347472-n6811ens 281 21 - - HYPH cord-347472-n6811ens 281 22 qPCR qPCR NNP cord-347472-n6811ens 281 23 mastermix mastermix NNP cord-347472-n6811ens 281 24 ( ( -LRB- cord-347472-n6811ens 281 25 containing contain VBG cord-347472-n6811ens 281 26 reverse reverse JJ cord-347472-n6811ens 281 27 transcriptase transcriptase NN cord-347472-n6811ens 281 28 ) ) -RRB- cord-347472-n6811ens 281 29 or or CC cord-347472-n6811ens 281 30 TaqMan TaqMan NNP cord-347472-n6811ens 281 31 Fast Fast NNP cord-347472-n6811ens 281 32 qPCR qPCR NNP cord-347472-n6811ens 281 33 mastermix mastermix FW cord-347472-n6811ens 281 34 ( ( -LRB- cord-347472-n6811ens 281 35 lacking lack VBG cord-347472-n6811ens 281 36 reverse reverse JJ cord-347472-n6811ens 281 37 transcriptase transcriptase NN cord-347472-n6811ens 281 38 ) ) -RRB- cord-347472-n6811ens 281 39 using use VBG cord-347472-n6811ens 281 40 either either CC cord-347472-n6811ens 281 41 the the DT cord-347472-n6811ens 281 42 CDC CDC NNP cord-347472-n6811ens 281 43 - - HYPH cord-347472-n6811ens 281 44 specified specify VBN cord-347472-n6811ens 281 45 or or CC cord-347472-n6811ens 281 46 transcript transcript NN cord-347472-n6811ens 281 47 - - HYPH cord-347472-n6811ens 281 48 specific specific JJ cord-347472-n6811ens 281 49 RPP30 RPP30 NNP cord-347472-n6811ens 281 50 probe probe NN cord-347472-n6811ens 281 51 . . . cord-347472-n6811ens 282 1 The the DT cord-347472-n6811ens 282 2 transcript transcript NN cord-347472-n6811ens 282 3 - - HYPH cord-347472-n6811ens 282 4 specific specific JJ cord-347472-n6811ens 282 5 probe probe NN cord-347472-n6811ens 282 6 generates generate VBZ cord-347472-n6811ens 282 7 signal signal NN cord-347472-n6811ens 282 8 only only RB cord-347472-n6811ens 282 9 in in IN cord-347472-n6811ens 282 10 reactions reaction NNS cord-347472-n6811ens 282 11 with with IN cord-347472-n6811ens 282 12 an an DT cord-347472-n6811ens 282 13 RNA RNA NNP cord-347472-n6811ens 282 14 input input NN cord-347472-n6811ens 282 15 where where WRB cord-347472-n6811ens 282 16 reverse reverse NN cord-347472-n6811ens 282 17 - - HYPH cord-347472-n6811ens 282 18 transcriptase transcriptase NN cord-347472-n6811ens 282 19 is be VBZ cord-347472-n6811ens 282 20 present present JJ cord-347472-n6811ens 282 21 ( ( -LRB- cord-347472-n6811ens 282 22 as as IN cord-347472-n6811ens 282 23 a a DT cord-347472-n6811ens 282 24 one one CD cord-347472-n6811ens 282 25 - - HYPH cord-347472-n6811ens 282 26 step step NN cord-347472-n6811ens 282 27 mastermix mastermix NN cord-347472-n6811ens 282 28 ) ) -RRB- cord-347472-n6811ens 282 29 . . . cord-347472-n6811ens 283 1 Genomic genomic JJ cord-347472-n6811ens 283 2 DNA dna NN cord-347472-n6811ens 283 3 does do VBZ cord-347472-n6811ens 283 4 not not RB cord-347472-n6811ens 283 5 generate generate VB cord-347472-n6811ens 283 6 a a DT cord-347472-n6811ens 283 7 signal signal NN cord-347472-n6811ens 283 8 above above IN cord-347472-n6811ens 283 9 baseline baseline NN cord-347472-n6811ens 283 10 even even RB cord-347472-n6811ens 283 11 in in IN cord-347472-n6811ens 283 12 an an DT cord-347472-n6811ens 283 13 extended extended JJ cord-347472-n6811ens 283 14 50-cycle 50-cycle CD cord-347472-n6811ens 283 15 amplification amplification NN cord-347472-n6811ens 283 16 , , , cord-347472-n6811ens 283 17 nor nor CC cord-347472-n6811ens 283 18 does do VBZ cord-347472-n6811ens 283 19 RNA RNA NNP cord-347472-n6811ens 283 20 generate generate VB cord-347472-n6811ens 283 21 a a DT cord-347472-n6811ens 283 22 signal signal NN cord-347472-n6811ens 283 23 in in IN cord-347472-n6811ens 283 24 a a DT cord-347472-n6811ens 283 25 qPCR qpcr RB cord-347472-n6811ens 283 26 - - HYPH cord-347472-n6811ens 283 27 only only RB cord-347472-n6811ens 283 28 ( ( -LRB- cord-347472-n6811ens 283 29 no no DT cord-347472-n6811ens 283 30 reverse reverse JJ cord-347472-n6811ens 283 31 transcriptase transcriptase NN cord-347472-n6811ens 283 32 ) ) -RRB- cord-347472-n6811ens 283 33 reaction reaction NN cord-347472-n6811ens 283 34 for for IN cord-347472-n6811ens 283 35 a a DT cord-347472-n6811ens 283 36 transcriptspecific transcriptspecific NNP cord-347472-n6811ens 283 37 probe probe NN cord-347472-n6811ens 283 38 . . . cord-347472-n6811ens 284 1 Signal signal NN cord-347472-n6811ens 284 2 generated generate VBN cord-347472-n6811ens 284 3 for for IN cord-347472-n6811ens 284 4 CDC CDC NNP cord-347472-n6811ens 284 5 - - HYPH cord-347472-n6811ens 284 6 RP RP NNP cord-347472-n6811ens 284 7 probe probe NN cord-347472-n6811ens 284 8 in in IN cord-347472-n6811ens 284 9 PCR PCR NNP cord-347472-n6811ens 284 10 - - HYPH cord-347472-n6811ens 284 11 only only RB cord-347472-n6811ens 284 12 analysis analysis NN cord-347472-n6811ens 284 13 of of IN cord-347472-n6811ens 284 14 " " `` cord-347472-n6811ens 284 15 RNA RNA NNP cord-347472-n6811ens 284 16 " " '' cord-347472-n6811ens 284 17 is be VBZ cord-347472-n6811ens 284 18 due due JJ cord-347472-n6811ens 284 19 to to IN cord-347472-n6811ens 284 20 low low JJ cord-347472-n6811ens 284 21 - - HYPH cord-347472-n6811ens 284 22 concentration concentration NN cord-347472-n6811ens 284 23 genomic genomic JJ cord-347472-n6811ens 284 24 DNA dna NN cord-347472-n6811ens 284 25 present present NN cord-347472-n6811ens 284 26 in in IN cord-347472-n6811ens 284 27 Quantigene Quantigene NNP cord-347472-n6811ens 284 28 commercial commercial NN cord-347472-n6811ens 284 29 RNA RNA NNP cord-347472-n6811ens 284 30 ( ( -LRB- cord-347472-n6811ens 284 31 supplemental supplemental JJ cord-347472-n6811ens 284 32 discussion discussion NN cord-347472-n6811ens 284 33 ) ) -RRB- cord-347472-n6811ens 284 34 , , , cord-347472-n6811ens 284 35 further further RB cord-347472-n6811ens 284 36 underscoring underscore VBG cord-347472-n6811ens 284 37 the the DT cord-347472-n6811ens 284 38 need need NN cord-347472-n6811ens 284 39 for for IN cord-347472-n6811ens 284 40 transcript transcript NN cord-347472-n6811ens 284 41 - - HYPH cord-347472-n6811ens 284 42 specific specific JJ cord-347472-n6811ens 284 43 primer primer NN cord-347472-n6811ens 284 44 design design NN cord-347472-n6811ens 284 45 . . . cord-347472-n6811ens 285 1 The the DT cord-347472-n6811ens 285 2 cDNA cdna NN cord-347472-n6811ens 285 3 - - HYPH cord-347472-n6811ens 285 4 specific specific JJ cord-347472-n6811ens 285 5 RPP30 rpp30 IN cord-347472-n6811ens 285 6 assay assay NN cord-347472-n6811ens 285 7 used use VBN cord-347472-n6811ens 285 8 here here RB cord-347472-n6811ens 285 9 is be VBZ cord-347472-n6811ens 285 10 doubly doubly RB cord-347472-n6811ens 285 11 - - HYPH cord-347472-n6811ens 285 12 unable unable JJ cord-347472-n6811ens 285 13 to to TO cord-347472-n6811ens 285 14 generate generate VB cord-347472-n6811ens 285 15 signal signal NN cord-347472-n6811ens 285 16 qPCR qpcr NN cord-347472-n6811ens 285 17 signals signal NNS cord-347472-n6811ens 285 18 from from IN cord-347472-n6811ens 285 19 genomic genomic NN cord-347472-n6811ens 285 20 - - HYPH cord-347472-n6811ens 285 21 DNA dna NN cord-347472-n6811ens 285 22 . . . cord-347472-n6811ens 286 1 Reverse reverse VB cord-347472-n6811ens 286 2 - - HYPH cord-347472-n6811ens 286 3 transcribed transcribe VBN cord-347472-n6811ens 286 4 RPP30 RPP30 NNP cord-347472-n6811ens 286 5 RNA RNA NNP cord-347472-n6811ens 286 6 can can MD cord-347472-n6811ens 286 7 serve serve VB cord-347472-n6811ens 286 8 as as IN cord-347472-n6811ens 286 9 a a DT cord-347472-n6811ens 286 10 template template NN cord-347472-n6811ens 286 11 for for IN cord-347472-n6811ens 286 12 the the DT cord-347472-n6811ens 286 13 Hs Hs NNP cord-347472-n6811ens 286 14 . . . cord-347472-n6811ens 287 1 PT.58.2854947 PT.58.2854947 NNP cord-347472-n6811ens 287 2 qPCR qPCR NNP cord-347472-n6811ens 287 3 assay assay NNP cord-347472-n6811ens 287 4 generating generate VBG cord-347472-n6811ens 287 5 a a DT cord-347472-n6811ens 287 6 relatively relatively RB cord-347472-n6811ens 287 7 short short JJ cord-347472-n6811ens 287 8 amplicon amplicon NN cord-347472-n6811ens 287 9 ( ( -LRB- cord-347472-n6811ens 287 10 S3a s3a NN cord-347472-n6811ens 287 11 ) ) -RRB- cord-347472-n6811ens 287 12 . . . cord-347472-n6811ens 288 1 The the DT cord-347472-n6811ens 288 2 forward forward NN cord-347472-n6811ens 288 3 and and CC cord-347472-n6811ens 288 4 reverse reverse VB cord-347472-n6811ens 288 5 primers primer NNS cord-347472-n6811ens 288 6 bind bind VBP cord-347472-n6811ens 288 7 in in IN cord-347472-n6811ens 288 8 the the DT cord-347472-n6811ens 288 9 bodies body NNS cord-347472-n6811ens 288 10 of of IN cord-347472-n6811ens 288 11 exon exon NN cord-347472-n6811ens 288 12 1 1 CD cord-347472-n6811ens 288 13 and and CC cord-347472-n6811ens 288 14 3 3 CD cord-347472-n6811ens 288 15 , , , cord-347472-n6811ens 288 16 respectively respectively RB cord-347472-n6811ens 288 17 . . . cord-347472-n6811ens 289 1 The the DT cord-347472-n6811ens 289 2 hydrolysis hydrolysis NN cord-347472-n6811ens 289 3 probe probe NN cord-347472-n6811ens 289 4 binds bind VBZ cord-347472-n6811ens 289 5 at at IN cord-347472-n6811ens 289 6 the the DT cord-347472-n6811ens 289 7 exon exon NN cord-347472-n6811ens 289 8 1 1 CD cord-347472-n6811ens 289 9 -exon -exon SYM cord-347472-n6811ens 289 10 3 3 CD cord-347472-n6811ens 289 11 junction junction NN cord-347472-n6811ens 289 12 that that WDT cord-347472-n6811ens 289 13 is be VBZ cord-347472-n6811ens 289 14 formed form VBN cord-347472-n6811ens 289 15 during during IN cord-347472-n6811ens 289 16 mRNA mRNA NNP cord-347472-n6811ens 289 17 splicing splicing NN cord-347472-n6811ens 289 18 . . . cord-347472-n6811ens 290 1 This this DT cord-347472-n6811ens 290 2 primer primer NN cord-347472-n6811ens 290 3 / / SYM cord-347472-n6811ens 290 4 probe probe NN cord-347472-n6811ens 290 5 set set NN cord-347472-n6811ens 290 6 does do VBZ cord-347472-n6811ens 290 7 not not RB cord-347472-n6811ens 290 8 generate generate VB cord-347472-n6811ens 290 9 a a DT cord-347472-n6811ens 290 10 signal signal NN cord-347472-n6811ens 290 11 from from IN cord-347472-n6811ens 290 12 a a DT cord-347472-n6811ens 290 13 genomic genomic JJ cord-347472-n6811ens 290 14 DNA dna NN cord-347472-n6811ens 290 15 template template NN cord-347472-n6811ens 290 16 ( ( -LRB- cord-347472-n6811ens 290 17 shown show VBN cord-347472-n6811ens 290 18 above above RB cord-347472-n6811ens 290 19 ) ) -RRB- cord-347472-n6811ens 290 20 , , , cord-347472-n6811ens 290 21 due due IN cord-347472-n6811ens 290 22 to to IN cord-347472-n6811ens 290 23 the the DT cord-347472-n6811ens 290 24 ~3.5 ~3.5 CD cord-347472-n6811ens 290 25 kb kb NNP cord-347472-n6811ens 290 26 spacing space VBG cord-347472-n6811ens 290 27 between between IN cord-347472-n6811ens 290 28 the the DT cord-347472-n6811ens 290 29 forward forward NN cord-347472-n6811ens 290 30 and and CC cord-347472-n6811ens 290 31 reverse reverse VB cord-347472-n6811ens 290 32 primers primer NNS cord-347472-n6811ens 290 33 that that WDT cord-347472-n6811ens 290 34 is be VBZ cord-347472-n6811ens 290 35 un un NNP cord-347472-n6811ens 290 36 - - JJ cord-347472-n6811ens 290 37 amplifiable amplifiable JJ cord-347472-n6811ens 290 38 using use VBG cord-347472-n6811ens 290 39 the the DT cord-347472-n6811ens 290 40 short short JJ cord-347472-n6811ens 290 41 annealing annealing NN cord-347472-n6811ens 290 42 / / SYM cord-347472-n6811ens 290 43 extension extension NN cord-347472-n6811ens 290 44 cycles cycle NNS cord-347472-n6811ens 290 45 of of IN cord-347472-n6811ens 290 46 the the DT cord-347472-n6811ens 290 47 CDC CDC NNP cord-347472-n6811ens 290 48 ramping ramp VBG cord-347472-n6811ens 290 49 program program NN cord-347472-n6811ens 290 50 ( ( -LRB- cord-347472-n6811ens 290 51 S3b s3b NN cord-347472-n6811ens 290 52 ) ) -RRB- cord-347472-n6811ens 290 53 . . . cord-347472-n6811ens 291 1 Even even RB cord-347472-n6811ens 291 2 if if IN cord-347472-n6811ens 291 3 PCR PCR NNP cord-347472-n6811ens 291 4 product product NN cord-347472-n6811ens 291 5 were be VBD cord-347472-n6811ens 291 6 generated generate VBN cord-347472-n6811ens 291 7 , , , cord-347472-n6811ens 291 8 the the DT cord-347472-n6811ens 291 9 hydrolysis hydrolysis NN cord-347472-n6811ens 291 10 probe probe NN cord-347472-n6811ens 291 11 binding bind VBG cord-347472-n6811ens 291 12 sequence sequence NN cord-347472-n6811ens 291 13 is be VBZ cord-347472-n6811ens 291 14 split split VBN cord-347472-n6811ens 291 15 in in IN cord-347472-n6811ens 291 16 half half NN cord-347472-n6811ens 291 17 , , , cord-347472-n6811ens 291 18 with with IN cord-347472-n6811ens 291 19 each each DT cord-347472-n6811ens 291 20 side side NN cord-347472-n6811ens 291 21 ~3 ~3 -RRB- cord-347472-n6811ens 291 22 kb kb XX cord-347472-n6811ens 291 23 apart apart RB cord-347472-n6811ens 291 24 in in IN cord-347472-n6811ens 291 25 a a DT cord-347472-n6811ens 291 26 genome genome NN cord-347472-n6811ens 291 27 - - HYPH cord-347472-n6811ens 291 28 templated templated JJ cord-347472-n6811ens 291 29 amplicon amplicon NN cord-347472-n6811ens 291 30 . . . cord-347472-n6811ens 292 1 Colleagues colleague NNS cord-347472-n6811ens 292 2 at at IN cord-347472-n6811ens 292 3 the the DT cord-347472-n6811ens 292 4 CDC CDC NNP cord-347472-n6811ens 292 5 , , , cord-347472-n6811ens 292 6 I -PRON- PRP cord-347472-n6811ens 292 7 am be VBP cord-347472-n6811ens 292 8 writing write VBG cord-347472-n6811ens 292 9 to to TO cord-347472-n6811ens 292 10 express express VB cord-347472-n6811ens 292 11 my -PRON- PRP$ cord-347472-n6811ens 292 12 concern concern NN cord-347472-n6811ens 292 13 that that IN cord-347472-n6811ens 292 14 the the DT cord-347472-n6811ens 292 15 RNase RNase NNP cord-347472-n6811ens 292 16 P p NN cord-347472-n6811ens 292 17 probe probe NN cord-347472-n6811ens 292 18 sequence sequence NN cord-347472-n6811ens 292 19 specified specify VBN cord-347472-n6811ens 292 20 in in IN cord-347472-n6811ens 292 21 the the DT cord-347472-n6811ens 292 22 2019-nCoVEUA-01 2019-ncoveua-01 CD cord-347472-n6811ens 292 23 Revision revision NN cord-347472-n6811ens 292 24 2 2 CD cord-347472-n6811ens 292 25 assay assay NN cord-347472-n6811ens 292 26 does do VBZ cord-347472-n6811ens 292 27 not not RB cord-347472-n6811ens 292 28 serve serve VB cord-347472-n6811ens 292 29 its -PRON- PRP$ cord-347472-n6811ens 292 30 desired desire VBN cord-347472-n6811ens 292 31 function function NN cord-347472-n6811ens 292 32 as as IN cord-347472-n6811ens 292 33 a a DT cord-347472-n6811ens 292 34 control control NN cord-347472-n6811ens 292 35 of of IN cord-347472-n6811ens 292 36 sample sample NN cord-347472-n6811ens 292 37 collection collection NN cord-347472-n6811ens 292 38 and and CC cord-347472-n6811ens 292 39 reverse reverse VB cord-347472-n6811ens 292 40 transcription transcription NN cord-347472-n6811ens 292 41 . . . cord-347472-n6811ens 293 1 The the DT cord-347472-n6811ens 293 2 goal goal NN cord-347472-n6811ens 293 3 of of IN cord-347472-n6811ens 293 4 the the DT cord-347472-n6811ens 293 5 RNaseP RNaseP NNP cord-347472-n6811ens 293 6 probe probe NN cord-347472-n6811ens 293 7 is be VBZ cord-347472-n6811ens 293 8 to to TO cord-347472-n6811ens 293 9 provide provide VB cord-347472-n6811ens 293 10 a a DT cord-347472-n6811ens 293 11 composite composite JJ cord-347472-n6811ens 293 12 control control NN cord-347472-n6811ens 293 13 that that WDT cord-347472-n6811ens 293 14 is be VBZ cord-347472-n6811ens 293 15 positive positive JJ cord-347472-n6811ens 293 16 if if IN cord-347472-n6811ens 293 17 sufficient sufficient JJ cord-347472-n6811ens 293 18 specimen specimen NN cord-347472-n6811ens 293 19 , , , cord-347472-n6811ens 293 20 including include VBG cord-347472-n6811ens 293 21 intact intact JJ cord-347472-n6811ens 293 22 RNA RNA NNP cord-347472-n6811ens 293 23 , , , cord-347472-n6811ens 293 24 has have VBZ cord-347472-n6811ens 293 25 been be VBN cord-347472-n6811ens 293 26 collected collect VBN cord-347472-n6811ens 293 27 AND and CC cord-347472-n6811ens 293 28 a a DT cord-347472-n6811ens 293 29 successful successful JJ cord-347472-n6811ens 293 30 reverse reverse NN cord-347472-n6811ens 293 31 - - HYPH cord-347472-n6811ens 293 32 transcription transcription NN cord-347472-n6811ens 293 33 qPCR qpcr NN cord-347472-n6811ens 293 34 has have VBZ cord-347472-n6811ens 293 35 occurred occur VBN cord-347472-n6811ens 293 36 . . . cord-347472-n6811ens 294 1 As as IN cord-347472-n6811ens 294 2 per per IN cord-347472-n6811ens 294 3 the the DT cord-347472-n6811ens 294 4 EUA EUA NNP cord-347472-n6811ens 294 5 , , , cord-347472-n6811ens 294 6 " " `` cord-347472-n6811ens 294 7 Failure failure NN cord-347472-n6811ens 294 8 to to TO cord-347472-n6811ens 294 9 detect detect VB cord-347472-n6811ens 294 10 RNase RNase NNP cord-347472-n6811ens 294 11 P p NN cord-347472-n6811ens 294 12 in in IN cord-347472-n6811ens 294 13 any any DT cord-347472-n6811ens 294 14 clinical clinical JJ cord-347472-n6811ens 294 15 specimens specimen NNS cord-347472-n6811ens 294 16 may may MD cord-347472-n6811ens 294 17 indicate indicate VB cord-347472-n6811ens 294 18 : : : cord-347472-n6811ens 294 19 − − NNS cord-347472-n6811ens 294 20 Improper improper JJ cord-347472-n6811ens 294 21 extraction extraction NN cord-347472-n6811ens 294 22 of of IN cord-347472-n6811ens 294 23 nucleic nucleic JJ cord-347472-n6811ens 294 24 acid acid NN cord-347472-n6811ens 294 25 from from IN cord-347472-n6811ens 294 26 clinical clinical JJ cord-347472-n6811ens 294 27 materials material NNS cord-347472-n6811ens 294 28 resulting result VBG cord-347472-n6811ens 294 29 in in IN cord-347472-n6811ens 294 30 loss loss NN cord-347472-n6811ens 294 31 of of IN cord-347472-n6811ens 294 32 RNA RNA NNP cord-347472-n6811ens 294 33 and/or and/or CC cord-347472-n6811ens 294 34 RNA RNA NNP cord-347472-n6811ens 294 35 degradation degradation NN cord-347472-n6811ens 294 36 . . . cord-347472-n6811ens 295 1 " " '' cord-347472-n6811ens 296 1 The the DT cord-347472-n6811ens 296 2 specified specified JJ cord-347472-n6811ens 296 3 RNaseP rnasep NN cord-347472-n6811ens 296 4 probe probe NN cord-347472-n6811ens 296 5 is be VBZ cord-347472-n6811ens 296 6 not not RB cord-347472-n6811ens 296 7 selective selective JJ cord-347472-n6811ens 296 8 for for IN cord-347472-n6811ens 296 9 the the DT cord-347472-n6811ens 296 10 RNaseP RNaseP NNP cord-347472-n6811ens 296 11 transcript transcript NN cord-347472-n6811ens 296 12 . . . cord-347472-n6811ens 297 1 The the DT cord-347472-n6811ens 297 2 amplicon amplicon NN cord-347472-n6811ens 297 3 and and CC cord-347472-n6811ens 297 4 probe probe NN cord-347472-n6811ens 297 5 sequence sequence NN cord-347472-n6811ens 297 6 are be VBP cord-347472-n6811ens 297 7 contained contain VBN cord-347472-n6811ens 297 8 within within IN cord-347472-n6811ens 297 9 a a DT cord-347472-n6811ens 297 10 single single JJ cord-347472-n6811ens 297 11 exon exon NN cord-347472-n6811ens 297 12 , , , cord-347472-n6811ens 297 13 do do VBP cord-347472-n6811ens 297 14 not not RB cord-347472-n6811ens 297 15 span span VB cord-347472-n6811ens 297 16 an an DT cord-347472-n6811ens 297 17 exon exon NN cord-347472-n6811ens 297 18 - - HYPH cord-347472-n6811ens 297 19 exon exon JJ cord-347472-n6811ens 297 20 junction junction NN cord-347472-n6811ens 297 21 , , , cord-347472-n6811ens 297 22 and and CC cord-347472-n6811ens 297 23 therefore therefore RB cord-347472-n6811ens 297 24 detect detect VBP cord-347472-n6811ens 297 25 both both DT cord-347472-n6811ens 297 26 RNA RNA NNP cord-347472-n6811ens 297 27 and and CC cord-347472-n6811ens 297 28 DNA dna NN cord-347472-n6811ens 297 29 templates template NNS cord-347472-n6811ens 297 30 ( ( -LRB- cord-347472-n6811ens 297 31 see see VB cord-347472-n6811ens 297 32 illustration illustration NN cord-347472-n6811ens 297 33 on on IN cord-347472-n6811ens 297 34 following follow VBG cord-347472-n6811ens 297 35 page page NN cord-347472-n6811ens 297 36 ) ) -RRB- cord-347472-n6811ens 297 37 . . . cord-347472-n6811ens 298 1 This this DT cord-347472-n6811ens 298 2 fundamental fundamental JJ cord-347472-n6811ens 298 3 problem problem NN cord-347472-n6811ens 298 4 undermines undermine VBZ cord-347472-n6811ens 298 5 the the DT cord-347472-n6811ens 298 6 control control NN cord-347472-n6811ens 298 7 and and CC cord-347472-n6811ens 298 8 makes make VBZ cord-347472-n6811ens 298 9 " " `` cord-347472-n6811ens 298 10 RNaseP rnasep JJ cord-347472-n6811ens 298 11 positive positive JJ cord-347472-n6811ens 298 12 , , , cord-347472-n6811ens 298 13 viral viral JJ cord-347472-n6811ens 298 14 transcript transcript NN cord-347472-n6811ens 298 15 negative negative JJ cord-347472-n6811ens 298 16 " " `` cord-347472-n6811ens 298 17 samples sample NNS cord-347472-n6811ens 298 18 ambiguous ambiguous JJ cord-347472-n6811ens 298 19 . . . cord-347472-n6811ens 299 1 Samples sample NNS cord-347472-n6811ens 299 2 with with IN cord-347472-n6811ens 299 3 degraded degrade VBN cord-347472-n6811ens 299 4 RNA RNA NNP cord-347472-n6811ens 299 5 ( ( -LRB- cord-347472-n6811ens 299 6 but but CC cord-347472-n6811ens 299 7 intact intact JJ cord-347472-n6811ens 299 8 human human JJ cord-347472-n6811ens 299 9 DNA dna NN cord-347472-n6811ens 299 10 ) ) -RRB- cord-347472-n6811ens 299 11 will will MD cord-347472-n6811ens 299 12 generate generate VB cord-347472-n6811ens 299 13 a a DT cord-347472-n6811ens 299 14 qPCR qpcr JJ cord-347472-n6811ens 299 15 signal signal NN cord-347472-n6811ens 299 16 for for IN cord-347472-n6811ens 299 17 the the DT cord-347472-n6811ens 299 18 RNaseP RNaseP NNP cord-347472-n6811ens 299 19 control control NN cord-347472-n6811ens 299 20 due due JJ cord-347472-n6811ens 299 21 to to IN cord-347472-n6811ens 299 22 contaminating contaminate VBG cord-347472-n6811ens 299 23 DNA dna NN cord-347472-n6811ens 299 24 , , , cord-347472-n6811ens 299 25 but but CC cord-347472-n6811ens 299 26 return return VB cord-347472-n6811ens 299 27 a a DT cord-347472-n6811ens 299 28 false false JJ cord-347472-n6811ens 299 29 negative negative NN cord-347472-n6811ens 299 30 for for IN cord-347472-n6811ens 299 31 N1 N1 NNP cord-347472-n6811ens 299 32 and and CC cord-347472-n6811ens 299 33 N2 N2 NNP cord-347472-n6811ens 299 34 ( ( -LRB- cord-347472-n6811ens 299 35 viral viral JJ cord-347472-n6811ens 299 36 ) ) -RRB- cord-347472-n6811ens 299 37 amplicons amplicon NNS cord-347472-n6811ens 299 38 due due JJ cord-347472-n6811ens 299 39 to to IN cord-347472-n6811ens 299 40 the the DT cord-347472-n6811ens 299 41 absence absence NN cord-347472-n6811ens 299 42 of of IN cord-347472-n6811ens 299 43 intact intact JJ cord-347472-n6811ens 299 44 RNA RNA NNP cord-347472-n6811ens 299 45 . . . cord-347472-n6811ens 300 1 Similarly similarly RB cord-347472-n6811ens 300 2 , , , cord-347472-n6811ens 300 3 failure failure NN cord-347472-n6811ens 300 4 of of IN cord-347472-n6811ens 300 5 the the DT cord-347472-n6811ens 300 6 reverse reverse JJ cord-347472-n6811ens 300 7 transcription transcription NN cord-347472-n6811ens 300 8 step step NN cord-347472-n6811ens 300 9 precludes preclude VBZ cord-347472-n6811ens 300 10 viral viral JJ cord-347472-n6811ens 300 11 cDNA cdna NN cord-347472-n6811ens 300 12 synthesis synthesis NN cord-347472-n6811ens 300 13 , , , cord-347472-n6811ens 300 14 but but CC cord-347472-n6811ens 300 15 any any DT cord-347472-n6811ens 300 16 human human JJ cord-347472-n6811ens 300 17 genomic genomic JJ cord-347472-n6811ens 300 18 DNA dna NN cord-347472-n6811ens 300 19 will will MD cord-347472-n6811ens 300 20 generate generate VB cord-347472-n6811ens 300 21 a a DT cord-347472-n6811ens 300 22 positive positive JJ cord-347472-n6811ens 300 23 RP rp NN cord-347472-n6811ens 300 24 control control NN cord-347472-n6811ens 300 25 signal signal NN cord-347472-n6811ens 300 26 . . . cord-347472-n6811ens 301 1 Although although IN cord-347472-n6811ens 301 2 the the DT cord-347472-n6811ens 301 3 RP rp NN cord-347472-n6811ens 301 4 sequences sequence NNS cord-347472-n6811ens 301 5 are be VBP cord-347472-n6811ens 301 6 inherent inherent JJ cord-347472-n6811ens 301 7 non non JJ cord-347472-n6811ens 301 8 - - JJ cord-347472-n6811ens 301 9 selective selective JJ cord-347472-n6811ens 301 10 for for IN cord-347472-n6811ens 301 11 RNaseP RNaseP NNP cord-347472-n6811ens 301 12 RNA RNA NNP cord-347472-n6811ens 301 13 , , , cord-347472-n6811ens 301 14 it -PRON- PRP cord-347472-n6811ens 301 15 is be VBZ cord-347472-n6811ens 301 16 conceivable conceivable JJ cord-347472-n6811ens 301 17 that that IN cord-347472-n6811ens 301 18 this this DT cord-347472-n6811ens 301 19 primer primer NN cord-347472-n6811ens 301 20 was be VBD cord-347472-n6811ens 301 21 functionally functionally RB cord-347472-n6811ens 301 22 tested test VBN cord-347472-n6811ens 301 23 in in IN cord-347472-n6811ens 301 24 ideal ideal JJ cord-347472-n6811ens 301 25 conditions condition NNS cord-347472-n6811ens 301 26 where where WRB cord-347472-n6811ens 301 27 sample sample NN cord-347472-n6811ens 301 28 extraction extraction NN cord-347472-n6811ens 301 29 generated generate VBD cord-347472-n6811ens 301 30 pure pure NNP cord-347472-n6811ens 301 31 RNA RNA NNP cord-347472-n6811ens 301 32 . . . cord-347472-n6811ens 302 1 As as IN cord-347472-n6811ens 302 2 the the DT cord-347472-n6811ens 302 3 range range NN cord-347472-n6811ens 302 4 of of IN cord-347472-n6811ens 302 5 sample sample NN cord-347472-n6811ens 302 6 preparation preparation NN cord-347472-n6811ens 302 7 protocols protocol NNS cord-347472-n6811ens 302 8 used use VBN cord-347472-n6811ens 302 9 expands expand VBZ cord-347472-n6811ens 302 10 ( ( -LRB- cord-347472-n6811ens 302 11 either either CC cord-347472-n6811ens 302 12 as as IN cord-347472-n6811ens 302 13 specified specify VBN cord-347472-n6811ens 302 14 in in IN cord-347472-n6811ens 302 15 the the DT cord-347472-n6811ens 302 16 EUA EUA NNP cord-347472-n6811ens 302 17 or or CC cord-347472-n6811ens 302 18 off off IN cord-347472-n6811ens 302 19 - - HYPH cord-347472-n6811ens 302 20 label label NN cord-347472-n6811ens 302 21 ) ) -RRB- cord-347472-n6811ens 302 22 , , , cord-347472-n6811ens 302 23 DNA dna NN cord-347472-n6811ens 302 24 purification purification NN cord-347472-n6811ens 302 25 alongside alongside IN cord-347472-n6811ens 302 26 RNA RNA NNP cord-347472-n6811ens 302 27 is be VBZ cord-347472-n6811ens 302 28 inevitable inevitable JJ cord-347472-n6811ens 302 29 . . . cord-347472-n6811ens 303 1 As as IN cord-347472-n6811ens 303 2 presently presently RB cord-347472-n6811ens 303 3 designed design VBN cord-347472-n6811ens 303 4 , , , cord-347472-n6811ens 303 5 the the DT cord-347472-n6811ens 303 6 RNaseP RNaseP NNP cord-347472-n6811ens 303 7 probe probe NN cord-347472-n6811ens 303 8 does do VBZ cord-347472-n6811ens 303 9 not not RB cord-347472-n6811ens 303 10 inform inform VB cord-347472-n6811ens 303 11 about about IN cord-347472-n6811ens 303 12 the the DT cord-347472-n6811ens 303 13 presence presence NN cord-347472-n6811ens 303 14 of of IN cord-347472-n6811ens 303 15 intact intact JJ cord-347472-n6811ens 303 16 specimen specimen NN cord-347472-n6811ens 303 17 RNA RNA NNP cord-347472-n6811ens 303 18 nor nor CC cord-347472-n6811ens 303 19 does do VBZ cord-347472-n6811ens 303 20 it -PRON- PRP cord-347472-n6811ens 303 21 control control VB cord-347472-n6811ens 303 22 for for IN cord-347472-n6811ens 303 23 successful successful JJ cord-347472-n6811ens 303 24 reverse reverse NN cord-347472-n6811ens 303 25 transcription transcription NN cord-347472-n6811ens 303 26 . . . cord-347472-n6811ens 304 1 This this DT cord-347472-n6811ens 304 2 has have VBZ cord-347472-n6811ens 304 3 the the DT cord-347472-n6811ens 304 4 potential potential NN cord-347472-n6811ens 304 5 to to TO cord-347472-n6811ens 304 6 adversely adversely RB cord-347472-n6811ens 304 7 affect affect VB cord-347472-n6811ens 304 8 clinical clinical JJ cord-347472-n6811ens 304 9 decision decision NN cord-347472-n6811ens 304 10 making making NN cord-347472-n6811ens 304 11 . . . cord-347472-n6811ens 305 1 The the DT cord-347472-n6811ens 305 2 2019-nCoVEUA-01 2019-ncoveua-01 CD cord-347472-n6811ens 305 3 Rev2 Rev2 NNP cord-347472-n6811ens 305 4 assay assay NN cord-347472-n6811ens 305 5 certainly certainly RB cord-347472-n6811ens 305 6 detects detect VBZ cord-347472-n6811ens 305 7 viral viral JJ cord-347472-n6811ens 305 8 load load NN cord-347472-n6811ens 305 9 from from IN cord-347472-n6811ens 305 10 controls control NNS cord-347472-n6811ens 305 11 and and CC cord-347472-n6811ens 305 12 patient patient NN cord-347472-n6811ens 305 13 samples sample NNS cord-347472-n6811ens 305 14 ( ( -LRB- cord-347472-n6811ens 305 15 our -PRON- PRP$ cord-347472-n6811ens 305 16 facility facility NN cord-347472-n6811ens 305 17 has have VBZ cord-347472-n6811ens 305 18 recently recently RB cord-347472-n6811ens 305 19 completely completely RB cord-347472-n6811ens 305 20 proficiency proficiency NN cord-347472-n6811ens 305 21 testing testing NN cord-347472-n6811ens 305 22 to to IN cord-347472-n6811ens 305 23 that that DT cord-347472-n6811ens 305 24 end end NN cord-347472-n6811ens 305 25 ) ) -RRB- cord-347472-n6811ens 305 26 , , , cord-347472-n6811ens 305 27 but but CC cord-347472-n6811ens 305 28 this this DT cord-347472-n6811ens 305 29 assay assay NN cord-347472-n6811ens 305 30 has have VBZ cord-347472-n6811ens 305 31 the the DT cord-347472-n6811ens 305 32 potential potential NN cord-347472-n6811ens 305 33 to to TO cord-347472-n6811ens 305 34 return return VB cord-347472-n6811ens 305 35 false false JJ cord-347472-n6811ens 305 36 negative negative JJ cord-347472-n6811ens 305 37 results result NNS cord-347472-n6811ens 305 38 . . . cord-347472-n6811ens 306 1 I -PRON- PRP cord-347472-n6811ens 306 2 suggest suggest VBP cord-347472-n6811ens 306 3 that that IN cord-347472-n6811ens 306 4 the the DT cord-347472-n6811ens 306 5 " " `` cord-347472-n6811ens 306 6 2019-nCoV 2019-ncov CD cord-347472-n6811ens 306 7 rRT rRT NNP cord-347472-n6811ens 306 8 - - HYPH cord-347472-n6811ens 306 9 PCR PCR NNP cord-347472-n6811ens 306 10 Diagnostic Diagnostic NNP cord-347472-n6811ens 306 11 Panel Panel NNP cord-347472-n6811ens 306 12 Results Results NNP cord-347472-n6811ens 306 13 Interpretation Interpretation NNP cord-347472-n6811ens 306 14 Guide Guide NNP cord-347472-n6811ens 306 15 " " '' cord-347472-n6811ens 306 16 be be VB cord-347472-n6811ens 306 17 updated update VBN cord-347472-n6811ens 306 18 to to TO cord-347472-n6811ens 306 19 reflect reflect VB cord-347472-n6811ens 306 20 this this DT cord-347472-n6811ens 306 21 fact fact NN cord-347472-n6811ens 306 22 , , , cord-347472-n6811ens 306 23 and and CC cord-347472-n6811ens 306 24 that that IN cord-347472-n6811ens 306 25 a a DT cord-347472-n6811ens 306 26 re re NN cord-347472-n6811ens 306 27 - - NN cord-347472-n6811ens 306 28 design design NN cord-347472-n6811ens 306 29 of of IN cord-347472-n6811ens 306 30 the the DT cord-347472-n6811ens 306 31 RNaseP RNaseP NNP cord-347472-n6811ens 306 32 probe probe NN cord-347472-n6811ens 306 33 ( ( -LRB- cord-347472-n6811ens 306 34 to to TO cord-347472-n6811ens 306 35 generate generate VB cord-347472-n6811ens 306 36 a a DT cord-347472-n6811ens 306 37 transcript transcript NN cord-347472-n6811ens 306 38 - - HYPH cord-347472-n6811ens 306 39 specific specific JJ cord-347472-n6811ens 306 40 amplicon amplicon NN cord-347472-n6811ens 306 41 that that WDT cord-347472-n6811ens 306 42 will will MD cord-347472-n6811ens 306 43 be be VB cord-347472-n6811ens 306 44 insensitive insensitive JJ cord-347472-n6811ens 306 45 to to IN cord-347472-n6811ens 306 46 DNA DNA NNP cord-347472-n6811ens 306 47 ) ) -RRB- cord-347472-n6811ens 306 48 be be VB cord-347472-n6811ens 306 49 undertaken undertake VBN cord-347472-n6811ens 306 50 post post JJ cord-347472-n6811ens 306 51 haste haste NN cord-347472-n6811ens 306 52 . . . cord-347472-n6811ens 307 1 I -PRON- PRP cord-347472-n6811ens 307 2 am be VBP cord-347472-n6811ens 307 3 including include VBG cord-347472-n6811ens 307 4 annotations annotation NNS cord-347472-n6811ens 307 5 of of IN cord-347472-n6811ens 307 6 Genbank Genbank NNP cord-347472-n6811ens 307 7 files file NNS cord-347472-n6811ens 307 8 for for IN cord-347472-n6811ens 307 9 both both CC cord-347472-n6811ens 307 10 RNA RNA NNP cord-347472-n6811ens 307 11 ( ( -LRB- cord-347472-n6811ens 307 12 CDS CDS NNP cord-347472-n6811ens 307 13 ) ) -RRB- cord-347472-n6811ens 307 14 and and CC cord-347472-n6811ens 307 15 genomic genomic JJ cord-347472-n6811ens 307 16 sequences sequence NNS cord-347472-n6811ens 307 17 on on IN cord-347472-n6811ens 307 18 the the DT cord-347472-n6811ens 307 19 following following JJ cord-347472-n6811ens 307 20 page page NN cord-347472-n6811ens 307 21 . . . cord-347472-n6811ens 308 1 Thank thank VBP cord-347472-n6811ens 308 2 you -PRON- PRP cord-347472-n6811ens 308 3 for for IN cord-347472-n6811ens 308 4 your -PRON- PRP$ cord-347472-n6811ens 308 5 work work NN cord-347472-n6811ens 308 6 on on IN cord-347472-n6811ens 308 7 the the DT cord-347472-n6811ens 308 8 rapid rapid JJ cord-347472-n6811ens 308 9 development development NN cord-347472-n6811ens 308 10 of of IN cord-347472-n6811ens 308 11 this this DT cord-347472-n6811ens 308 12 assay assay NN cord-347472-n6811ens 308 13 ; ; : cord-347472-n6811ens 308 14 my -PRON- PRP$ cord-347472-n6811ens 308 15 goal goal NN cord-347472-n6811ens 308 16 in in IN cord-347472-n6811ens 308 17 providing provide VBG cord-347472-n6811ens 308 18 this this DT cord-347472-n6811ens 308 19 feedback feedback NN cord-347472-n6811ens 308 20 is be VBZ cord-347472-n6811ens 308 21 to to TO cord-347472-n6811ens 308 22 help help VB cord-347472-n6811ens 308 23 improve improve VB cord-347472-n6811ens 308 24 upon upon IN cord-347472-n6811ens 308 25 your -PRON- PRP$ cord-347472-n6811ens 308 26 significant significant JJ cord-347472-n6811ens 308 27 efforts effort NNS cord-347472-n6811ens 308 28 and and CC cord-347472-n6811ens 308 29 ensure ensure VB cord-347472-n6811ens 308 30 that that IN cord-347472-n6811ens 308 31 reported report VBD cord-347472-n6811ens 308 32 results result NNS cord-347472-n6811ens 308 33 reflect reflect VBP cord-347472-n6811ens 308 34 patient patient JJ cord-347472-n6811ens 308 35 disease disease NN cord-347472-n6811ens 308 36 state state NN cord-347472-n6811ens 308 37 . . . cord-347472-n6811ens 309 1 Adam Adam NNP cord-347472-n6811ens 309 2 Rosebrock Rosebrock NNP cord-347472-n6811ens 309 3 , , , cord-347472-n6811ens 309 4 PhD phd NN cord-347472-n6811ens 309 5 CDC CDC NNP cord-347472-n6811ens 309 6 's 's POS cord-347472-n6811ens 309 7 response response NN cord-347472-n6811ens 309 8 , , , cord-347472-n6811ens 309 9 received receive VBD cord-347472-n6811ens 309 10 April April NNP cord-347472-n6811ens 309 11 25 25 CD cord-347472-n6811ens 309 12 , , , cord-347472-n6811ens 309 13 2020 2020 CD cord-347472-n6811ens 309 14 . . . cord-347472-n6811ens 310 1 To to TO cord-347472-n6811ens 310 2 protect protect VB cord-347472-n6811ens 310 3 the the DT cord-347472-n6811ens 310 4 email email NN cord-347472-n6811ens 310 5 addresses address NNS cord-347472-n6811ens 310 6 of of IN cord-347472-n6811ens 310 7 those those DT cord-347472-n6811ens 310 8 carbon carbon NN cord-347472-n6811ens 310 9 copied copy VBN cord-347472-n6811ens 310 10 , , , cord-347472-n6811ens 310 11 CDC CDC NNP cord-347472-n6811ens 310 12 - - HYPH cord-347472-n6811ens 310 13 internal internal JJ cord-347472-n6811ens 310 14 email email NN cord-347472-n6811ens 310 15 addresses address NNS cord-347472-n6811ens 310 16 have have VBP cord-347472-n6811ens 310 17 been be VBN cord-347472-n6811ens 310 18 redacted redact VBN cord-347472-n6811ens 310 19 . . . cord-347472-n6811ens 311 1 This this DT cord-347472-n6811ens 311 2 email email NN cord-347472-n6811ens 311 3 is be VBZ cord-347472-n6811ens 311 4 being be VBG cord-347472-n6811ens 311 5 presented present VBN cord-347472-n6811ens 311 6 in in IN cord-347472-n6811ens 311 7 full full JJ cord-347472-n6811ens 311 8 and and CC cord-347472-n6811ens 311 9 unedited unedited JJ cord-347472-n6811ens 311 10 . . . cord-347472-n6811ens 312 1 It -PRON- PRP cord-347472-n6811ens 312 2 is be VBZ cord-347472-n6811ens 312 3 internally internally RB cord-347472-n6811ens 312 4 ambiguous ambiguous JJ cord-347472-n6811ens 312 5 . . . cord-347472-n6811ens 313 1 The the DT cord-347472-n6811ens 313 2 first first JJ cord-347472-n6811ens 313 3 paragraph paragraph NN cord-347472-n6811ens 313 4 correctly correctly RB cord-347472-n6811ens 313 5 notes note VBZ cord-347472-n6811ens 313 6 that that IN cord-347472-n6811ens 313 7 my -PRON- PRP$ cord-347472-n6811ens 313 8 email email NN cord-347472-n6811ens 313 9 5 5 CD cord-347472-n6811ens 313 10 reflected reflect VBN cord-347472-n6811ens 313 11 concerns concern NNS cord-347472-n6811ens 313 12 about about IN cord-347472-n6811ens 313 13 false false JJ cord-347472-n6811ens 313 14 negative negative JJ cord-347472-n6811ens 313 15 potential potential NN cord-347472-n6811ens 313 16 . . . cord-347472-n6811ens 314 1 This this DT cord-347472-n6811ens 314 2 is be VBZ cord-347472-n6811ens 314 3 contradicted contradict VBN cord-347472-n6811ens 314 4 in in IN cord-347472-n6811ens 314 5 the the DT cord-347472-n6811ens 314 6 second second JJ cord-347472-n6811ens 314 7 paragraph paragraph NN cord-347472-n6811ens 314 8 as as IN cord-347472-n6811ens 314 9 " " `` cord-347472-n6811ens 314 10 false false JJ cord-347472-n6811ens 314 11 - - HYPH cord-347472-n6811ens 314 12 positive positive JJ cord-347472-n6811ens 314 13 results result NNS cord-347472-n6811ens 314 14 " " '' cord-347472-n6811ens 314 15 , , , cord-347472-n6811ens 314 16 which which WDT cord-347472-n6811ens 314 17 I -PRON- PRP cord-347472-n6811ens 314 18 hope hope VBP cord-347472-n6811ens 314 19 to to TO cord-347472-n6811ens 314 20 be be VB cord-347472-n6811ens 314 21 a a DT cord-347472-n6811ens 314 22 typo typo NN cord-347472-n6811ens 314 23 by by IN cord-347472-n6811ens 314 24 the the DT cord-347472-n6811ens 314 25 CDC CDC NNP cord-347472-n6811ens 314 26 . . . cord-347472-n6811ens 315 1 Given give VBN cord-347472-n6811ens 315 2 the the DT cord-347472-n6811ens 315 3 importance importance NN cord-347472-n6811ens 315 4 of of IN cord-347472-n6811ens 315 5 this this DT cord-347472-n6811ens 315 6 communication communication NN cord-347472-n6811ens 315 7 in in IN cord-347472-n6811ens 315 8 the the DT cord-347472-n6811ens 315 9 context context NN cord-347472-n6811ens 315 10 of of IN cord-347472-n6811ens 315 11 CDC CDC NNP cord-347472-n6811ens 315 12 's 's POS cord-347472-n6811ens 315 13 response response NN cord-347472-n6811ens 315 14 , , , cord-347472-n6811ens 315 15 I -PRON- PRP cord-347472-n6811ens 315 16 am be VBP cord-347472-n6811ens 315 17 including include VBG cord-347472-n6811ens 315 18 a a DT cord-347472-n6811ens 315 19 contact contact NN cord-347472-n6811ens 315 20 - - HYPH cord-347472-n6811ens 315 21 info info NN cord-347472-n6811ens 315 22 redacted redact VBN cord-347472-n6811ens 315 23 version version NN cord-347472-n6811ens 315 24 of of IN cord-347472-n6811ens 315 25 this this DT cord-347472-n6811ens 315 26 email email NN cord-347472-n6811ens 315 27 in in IN cord-347472-n6811ens 315 28 spite spite NN cord-347472-n6811ens 315 29 of of IN cord-347472-n6811ens 315 30 the the DT cord-347472-n6811ens 315 31 " " `` cord-347472-n6811ens 315 32 do do VBP cord-347472-n6811ens 315 33 not not RB cord-347472-n6811ens 315 34 distribute distribute VB cord-347472-n6811ens 315 35 " " `` cord-347472-n6811ens 315 36 message message NN cord-347472-n6811ens 315 37 . . . cord-347472-n6811ens 316 1 No no DT cord-347472-n6811ens 316 2 patient patient JJ cord-347472-n6811ens 316 3 identifying identify VBG cord-347472-n6811ens 316 4 information information NN cord-347472-n6811ens 316 5 is be VBZ cord-347472-n6811ens 316 6 present present JJ cord-347472-n6811ens 316 7 , , , cord-347472-n6811ens 316 8 and and CC cord-347472-n6811ens 316 9 this this DT cord-347472-n6811ens 316 10 represents represent VBZ cord-347472-n6811ens 316 11 US US NNP cord-347472-n6811ens 316 12 government government NN cord-347472-n6811ens 316 13 work work NN cord-347472-n6811ens 316 14 product product NN cord-347472-n6811ens 316 15 ( ( -LRB- cord-347472-n6811ens 316 16 from from IN cord-347472-n6811ens 316 17 the the DT cord-347472-n6811ens 316 18 CDC CDC NNP cord-347472-n6811ens 316 19 ) ) -RRB- cord-347472-n6811ens 316 20 and and CC cord-347472-n6811ens 316 21 that that DT cord-347472-n6811ens 316 22 of of IN cord-347472-n6811ens 316 23 a a DT cord-347472-n6811ens 316 24 NY NY NNP cord-347472-n6811ens 316 25 state state NN cord-347472-n6811ens 316 26 , , , cord-347472-n6811ens 316 27 federally federally RB cord-347472-n6811ens 316 28 grant grant VB cord-347472-n6811ens 316 29 funded fund VBN cord-347472-n6811ens 316 30 employee employee NN cord-347472-n6811ens 316 31 ( ( -LRB- cord-347472-n6811ens 316 32 the the DT cord-347472-n6811ens 316 33 recipient recipient NN cord-347472-n6811ens 316 34 ) ) -RRB- cord-347472-n6811ens 316 35 . . . cord-347472-n6811ens 317 1 Dear dear JJ cord-347472-n6811ens 317 2 Adam Adam NNP cord-347472-n6811ens 317 3 Rosebrock Rosebrock NNP cord-347472-n6811ens 317 4 , , , cord-347472-n6811ens 317 5 Our -PRON- PRP$ cord-347472-n6811ens 317 6 apologies apology NNS cord-347472-n6811ens 317 7 for for IN cord-347472-n6811ens 317 8 the the DT cord-347472-n6811ens 317 9 delayed delay VBN cord-347472-n6811ens 317 10 response response NN cord-347472-n6811ens 317 11 to to IN cord-347472-n6811ens 317 12 your -PRON- PRP$ cord-347472-n6811ens 317 13 email email NN cord-347472-n6811ens 317 14 . . . cord-347472-n6811ens 318 1 As as IN cord-347472-n6811ens 318 2 you -PRON- PRP cord-347472-n6811ens 318 3 can can MD cord-347472-n6811ens 318 4 imagine imagine VB cord-347472-n6811ens 318 5 we -PRON- PRP cord-347472-n6811ens 318 6 are be VBP cord-347472-n6811ens 318 7 currently currently RB cord-347472-n6811ens 318 8 experiencing experience VBG cord-347472-n6811ens 318 9 a a DT cord-347472-n6811ens 318 10 high high JJ cord-347472-n6811ens 318 11 volume volume NN cord-347472-n6811ens 318 12 of of IN cord-347472-n6811ens 318 13 inquiries inquiry NNS cord-347472-n6811ens 318 14 , , , cord-347472-n6811ens 318 15 but but CC cord-347472-n6811ens 318 16 patient patient JJ cord-347472-n6811ens 318 17 care care NN cord-347472-n6811ens 318 18 is be VBZ cord-347472-n6811ens 318 19 a a DT cord-347472-n6811ens 318 20 top top JJ cord-347472-n6811ens 318 21 priority priority NN cord-347472-n6811ens 318 22 and and CC cord-347472-n6811ens 318 23 we -PRON- PRP cord-347472-n6811ens 318 24 want want VBP cord-347472-n6811ens 318 25 to to TO cord-347472-n6811ens 318 26 thank thank VB cord-347472-n6811ens 318 27 you -PRON- PRP cord-347472-n6811ens 318 28 for for IN cord-347472-n6811ens 318 29 reaching reach VBG cord-347472-n6811ens 318 30 out out RP cord-347472-n6811ens 318 31 to to IN cord-347472-n6811ens 318 32 us -PRON- PRP cord-347472-n6811ens 318 33 about about IN cord-347472-n6811ens 318 34 your -PRON- PRP$ cord-347472-n6811ens 318 35 concerns concern NNS cord-347472-n6811ens 318 36 for for IN cord-347472-n6811ens 318 37 the the DT cord-347472-n6811ens 318 38 2019-nCov 2019-ncov CD cord-347472-n6811ens 318 39 assay assay NN cord-347472-n6811ens 318 40 and and CC cord-347472-n6811ens 318 41 the the DT cord-347472-n6811ens 318 42 potential potential NN cord-347472-n6811ens 318 43 for for IN cord-347472-n6811ens 318 44 false false JJ cord-347472-n6811ens 318 45 negatives negative NNS cord-347472-n6811ens 318 46 . . . cord-347472-n6811ens 319 1 The the DT cord-347472-n6811ens 319 2 assay assay NN cord-347472-n6811ens 319 3 RNaseP RNaseP NNP cord-347472-n6811ens 319 4 control control NN cord-347472-n6811ens 319 5 serves serve VBZ cord-347472-n6811ens 319 6 as as IN cord-347472-n6811ens 319 7 an an DT cord-347472-n6811ens 319 8 extraction extraction NN cord-347472-n6811ens 319 9 ( ( -LRB- cord-347472-n6811ens 319 10 total total JJ cord-347472-n6811ens 319 11 nucleic nucleic JJ cord-347472-n6811ens 319 12 acid acid NN cord-347472-n6811ens 319 13 ) ) -RRB- cord-347472-n6811ens 319 14 and and CC cord-347472-n6811ens 319 15 amplification amplification NN cord-347472-n6811ens 319 16 control control NN cord-347472-n6811ens 319 17 . . . cord-347472-n6811ens 320 1 The the DT cord-347472-n6811ens 320 2 assay assay NN cord-347472-n6811ens 320 3 positive positive JJ cord-347472-n6811ens 320 4 control control NN cord-347472-n6811ens 320 5 serves serve VBZ cord-347472-n6811ens 320 6 as as IN cord-347472-n6811ens 320 7 a a DT cord-347472-n6811ens 320 8 control control NN cord-347472-n6811ens 320 9 for for IN cord-347472-n6811ens 320 10 Reverse Reverse NNP cord-347472-n6811ens 320 11 Transcriptase Transcriptase NNP cord-347472-n6811ens 320 12 function function NN cord-347472-n6811ens 320 13 . . . cord-347472-n6811ens 321 1 Although although IN cord-347472-n6811ens 321 2 there there EX cord-347472-n6811ens 321 3 is be VBZ cord-347472-n6811ens 321 4 a a DT cord-347472-n6811ens 321 5 theoretical theoretical JJ cord-347472-n6811ens 321 6 possibility possibility NN cord-347472-n6811ens 321 7 that that WDT cord-347472-n6811ens 321 8 extracted extract VBD cord-347472-n6811ens 321 9 RNA RNA NNP cord-347472-n6811ens 321 10 might may MD cord-347472-n6811ens 321 11 be be VB cord-347472-n6811ens 321 12 degraded degrade VBN cord-347472-n6811ens 321 13 in in IN cord-347472-n6811ens 321 14 individual individual JJ cord-347472-n6811ens 321 15 samples sample NNS cord-347472-n6811ens 321 16 , , , cord-347472-n6811ens 321 17 this this DT cord-347472-n6811ens 321 18 assay assay NN cord-347472-n6811ens 321 19 design design NN cord-347472-n6811ens 321 20 has have VBZ cord-347472-n6811ens 321 21 been be VBN cord-347472-n6811ens 321 22 authorized authorize VBN cord-347472-n6811ens 321 23 by by IN cord-347472-n6811ens 321 24 FDA FDA NNP cord-347472-n6811ens 321 25 . . . cord-347472-n6811ens 322 1 In in IN cord-347472-n6811ens 322 2 addition addition NN cord-347472-n6811ens 322 3 , , , cord-347472-n6811ens 322 4 CDC CDC NNP cord-347472-n6811ens 322 5 has have VBZ cord-347472-n6811ens 322 6 not not RB cord-347472-n6811ens 322 7 received receive VBN cord-347472-n6811ens 322 8 feedback feedback NN cord-347472-n6811ens 322 9 that that IN cord-347472-n6811ens 322 10 the the DT cord-347472-n6811ens 323 1 CDC CDC NNP cord-347472-n6811ens 323 2 EUA EUA NNP cord-347472-n6811ens 323 3 COVID-19 COVID-19 NNP cord-347472-n6811ens 323 4 assay assay NN cord-347472-n6811ens 323 5 produces produce VBZ cord-347472-n6811ens 323 6 false false JJ cord-347472-n6811ens 323 7 - - HYPH cord-347472-n6811ens 323 8 positive positive JJ cord-347472-n6811ens 323 9 results result NNS cord-347472-n6811ens 323 10 when when WRB cord-347472-n6811ens 323 11 used use VBN cord-347472-n6811ens 323 12 according accord VBG cord-347472-n6811ens 323 13 to to IN cord-347472-n6811ens 323 14 the the DT cord-347472-n6811ens 323 15 IFU IFU NNP cord-347472-n6811ens 323 16 . . . cord-347472-n6811ens 324 1 The the DT cord-347472-n6811ens 324 2 CDC CDC NNP cord-347472-n6811ens 324 3 notes note NNS cord-347472-n6811ens 324 4 on on IN cord-347472-n6811ens 324 5 its -PRON- PRP$ cord-347472-n6811ens 324 6 website website NN cord-347472-n6811ens 324 7 and and CC cord-347472-n6811ens 324 8 in in IN cord-347472-n6811ens 324 9 its -PRON- PRP$ cord-347472-n6811ens 324 10 advice advice NN cord-347472-n6811ens 324 11 to to IN cord-347472-n6811ens 324 12 both both DT cord-347472-n6811ens 324 13 physicians physician NNS cord-347472-n6811ens 324 14 and and CC cord-347472-n6811ens 324 15 patients patient NNS cord-347472-n6811ens 324 16 that that IN cord-347472-n6811ens 324 17 the the DT cord-347472-n6811ens 324 18 RT RT NNP cord-347472-n6811ens 324 19 - - HYPH cord-347472-n6811ens 324 20 PCR PCR NNP cord-347472-n6811ens 324 21 may may MD cord-347472-n6811ens 324 22 come come VB cord-347472-n6811ens 324 23 back back RB cord-347472-n6811ens 324 24 negative negative JJ cord-347472-n6811ens 324 25 if if IN cord-347472-n6811ens 324 26 viral viral JJ cord-347472-n6811ens 324 27 titers titer NNS cord-347472-n6811ens 324 28 have have VBP cord-347472-n6811ens 324 29 n't not RB cord-347472-n6811ens 324 30 yet yet RB cord-347472-n6811ens 324 31 reached reach VBN cord-347472-n6811ens 324 32 the the DT cord-347472-n6811ens 324 33 levels level NNS cord-347472-n6811ens 324 34 of of IN cord-347472-n6811ens 324 35 detection detection NN cord-347472-n6811ens 324 36 , , , cord-347472-n6811ens 324 37 or or CC cord-347472-n6811ens 324 38 potentially potentially RB cord-347472-n6811ens 324 39 if if IN cord-347472-n6811ens 324 40 the the DT cord-347472-n6811ens 324 41 RNA RNA NNP cord-347472-n6811ens 324 42 has have VBZ cord-347472-n6811ens 324 43 degraded degrade VBN cord-347472-n6811ens 324 44 as as IN cord-347472-n6811ens 324 45 is be VBZ cord-347472-n6811ens 324 46 your -PRON- PRP$ cord-347472-n6811ens 324 47 concern concern NN cord-347472-n6811ens 324 48 , , , cord-347472-n6811ens 324 49 and and CC cord-347472-n6811ens 324 50 to to TO cord-347472-n6811ens 324 51 always always RB cord-347472-n6811ens 324 52 factor factor VB cord-347472-n6811ens 324 53 in in IN cord-347472-n6811ens 324 54 the the DT cord-347472-n6811ens 324 55 patient patient NN cord-347472-n6811ens 324 56 's 's POS cord-347472-n6811ens 324 57 symptoms symptom NNS cord-347472-n6811ens 324 58 when when WRB cord-347472-n6811ens 324 59 making make VBG cord-347472-n6811ens 324 60 a a DT cord-347472-n6811ens 324 61 diagnosis diagnosis NN cord-347472-n6811ens 324 62 . . . cord-347472-n6811ens 325 1 I -PRON- PRP cord-347472-n6811ens 325 2 believe believe VBP cord-347472-n6811ens 325 3 we -PRON- PRP cord-347472-n6811ens 325 4 can can MD cord-347472-n6811ens 325 5 all all RB cord-347472-n6811ens 325 6 agree agree VB cord-347472-n6811ens 325 7 that that IN cord-347472-n6811ens 325 8 in in IN cord-347472-n6811ens 325 9 this this DT cord-347472-n6811ens 325 10 pandemic pandemic NN cord-347472-n6811ens 325 11 it -PRON- PRP cord-347472-n6811ens 325 12 is be VBZ cord-347472-n6811ens 325 13 better well JJR cord-347472-n6811ens 325 14 to to TO cord-347472-n6811ens 325 15 err err VB cord-347472-n6811ens 325 16 on on IN cord-347472-n6811ens 325 17 the the DT cord-347472-n6811ens 325 18 side side NN cord-347472-n6811ens 325 19 of of IN cord-347472-n6811ens 325 20 caution caution NN cord-347472-n6811ens 325 21 . . . cord-347472-n6811ens 326 1 I -PRON- PRP cord-347472-n6811ens 326 2 hope hope VBP cord-347472-n6811ens 326 3 this this DT cord-347472-n6811ens 326 4 response response NN cord-347472-n6811ens 326 5 answers answer VBZ cord-347472-n6811ens 326 6 some some DT cord-347472-n6811ens 326 7 of of IN cord-347472-n6811ens 326 8 your -PRON- PRP$ cord-347472-n6811ens 326 9 concerns concern NNS cord-347472-n6811ens 326 10 , , , cord-347472-n6811ens 326 11 and and CC cord-347472-n6811ens 326 12 have have VBP cord-347472-n6811ens 326 13 a a DT cord-347472-n6811ens 326 14 wonderful wonderful JJ cord-347472-n6811ens 326 15 day day NN cord-347472-n6811ens 326 16 ! ! . cord-347472-n6811ens 327 1 This this DT cord-347472-n6811ens 327 2 e e NN cord-347472-n6811ens 327 3 - - NN cord-347472-n6811ens 327 4 mail mail NN cord-347472-n6811ens 327 5 message message NN cord-347472-n6811ens 327 6 , , , cord-347472-n6811ens 327 7 including include VBG cord-347472-n6811ens 327 8 any any DT cord-347472-n6811ens 327 9 attachments attachment NNS cord-347472-n6811ens 327 10 , , , cord-347472-n6811ens 327 11 is be VBZ cord-347472-n6811ens 327 12 for for IN cord-347472-n6811ens 327 13 the the DT cord-347472-n6811ens 327 14 sole sole JJ cord-347472-n6811ens 327 15 use use NN cord-347472-n6811ens 327 16 of of IN cord-347472-n6811ens 327 17 the the DT cord-347472-n6811ens 327 18 intended intended JJ cord-347472-n6811ens 327 19 recipient(s recipient(s NNP cord-347472-n6811ens 327 20 ) ) -RRB- cord-347472-n6811ens 327 21 and and CC cord-347472-n6811ens 327 22 may may MD cord-347472-n6811ens 327 23 contain contain VB cord-347472-n6811ens 327 24 confidential confidential JJ cord-347472-n6811ens 327 25 and and CC cord-347472-n6811ens 327 26 privileged privileged JJ cord-347472-n6811ens 327 27 information information NN cord-347472-n6811ens 327 28 . . . cord-347472-n6811ens 328 1 Any any DT cord-347472-n6811ens 328 2 unauthorized unauthorized JJ cord-347472-n6811ens 328 3 review review NN cord-347472-n6811ens 328 4 , , , cord-347472-n6811ens 328 5 use use NN cord-347472-n6811ens 328 6 , , , cord-347472-n6811ens 328 7 disclosure disclosure NN cord-347472-n6811ens 328 8 or or CC cord-347472-n6811ens 328 9 distribution distribution NN cord-347472-n6811ens 328 10 is be VBZ cord-347472-n6811ens 328 11 prohibited prohibit VBN cord-347472-n6811ens 328 12 . . . cord-347472-n6811ens 329 1 If if IN cord-347472-n6811ens 329 2 you -PRON- PRP cord-347472-n6811ens 329 3 are be VBP cord-347472-n6811ens 329 4 not not RB cord-347472-n6811ens 329 5 the the DT cord-347472-n6811ens 329 6 intended intend VBN cord-347472-n6811ens 329 7 recipient recipient NN cord-347472-n6811ens 329 8 , , , cord-347472-n6811ens 329 9 please please UH cord-347472-n6811ens 329 10 contact contact VB cord-347472-n6811ens 329 11 the the DT cord-347472-n6811ens 329 12 sender sender NN cord-347472-n6811ens 329 13 by by IN cord-347472-n6811ens 329 14 e e NN cord-347472-n6811ens 329 15 - - NN cord-347472-n6811ens 329 16 mail mail NN cord-347472-n6811ens 329 17 and and CC cord-347472-n6811ens 329 18 destroy destroy VB cord-347472-n6811ens 329 19 all all DT cord-347472-n6811ens 329 20 copies copy NNS cord-347472-n6811ens 329 21 of of IN cord-347472-n6811ens 329 22 the the DT cord-347472-n6811ens 329 23 original original JJ cord-347472-n6811ens 329 24 . . . cord-347472-n6811ens 330 1 Virological virological JJ cord-347472-n6811ens 330 2 assessment assessment NN cord-347472-n6811ens 330 3 of of IN cord-347472-n6811ens 330 4 hospitalized hospitalize VBN cord-347472-n6811ens 330 5 patients patient NNS cord-347472-n6811ens 330 6 with with IN cord-347472-n6811ens 330 7 COVID-2019 COVID-2019 NNP cord-347472-n6811ens 330 8 Revision Revision NNP cord-347472-n6811ens 330 9 : : : cord-347472-n6811ens 330 10 03 03 CD cord-347472-n6811ens 330 11 , , , cord-347472-n6811ens 330 12 Centers Centers NNPS cord-347472-n6811ens 330 13 for for IN cord-347472-n6811ens 330 14 Disease Disease NNP cord-347472-n6811ens 330 15 Control Control NNP cord-347472-n6811ens 330 16 and and CC cord-347472-n6811ens 330 17 Prevention Prevention NNP cord-347472-n6811ens 330 18 : : : cord-347472-n6811ens 330 19 Division division NN cord-347472-n6811ens 330 20 of of IN cord-347472-n6811ens 330 21 Viral Viral NNP cord-347472-n6811ens 330 22 Diseases Diseases NNPS cord-347472-n6811ens 330 23 Acknowledgments acknowledgment NNS cord-347472-n6811ens 331 1 : : : cord-347472-n6811ens 331 2 APR APR NNP cord-347472-n6811ens 331 3 would would MD cord-347472-n6811ens 331 4 like like VB cord-347472-n6811ens 331 5 to to TO cord-347472-n6811ens 331 6 thank thank VB cord-347472-n6811ens 331 7 Amy Amy NNP cord-347472-n6811ens 331 8 A. A. NNP cord-347472-n6811ens 331 9 Caudy Caudy NNP cord-347472-n6811ens 331 10 for for IN cord-347472-n6811ens 331 11 technical technical JJ cord-347472-n6811ens 331 12 discussion discussion NN cord-347472-n6811ens 331 13 and and CC cord-347472-n6811ens 331 14 critical critical JJ cord-347472-n6811ens 331 15 reading reading NN cord-347472-n6811ens 331 16 of of IN cord-347472-n6811ens 331 17 the the DT cord-347472-n6811ens 331 18 manuscript manuscript NN cord-347472-n6811ens 331 19 , , , cord-347472-n6811ens 331 20 Bruce Bruce NNP cord-347472-n6811ens 331 21 Futcher Futcher NNP cord-347472-n6811ens 331 22 for for IN cord-347472-n6811ens 331 23 discussion discussion NN cord-347472-n6811ens 331 24 , , , cord-347472-n6811ens 331 25 and and CC cord-347472-n6811ens 331 26 Richard Richard NNP cord-347472-n6811ens 331 27 Kew Kew NNP cord-347472-n6811ens 331 28 and and CC cord-347472-n6811ens 331 29 Karen Karen NNP cord-347472-n6811ens 331 30 Bai Bai NNP