id author title date pages extension mime words sentences flesch summary cache txt cord-346280-7sw30bsz Ramos Venancio, D. B. Biomathematical models for genetic diversity analyses in complete genomes of SARS-CoV-2 2020-10-02 .txt text/plain 4036 254 52 In this work, we evaluated the levels of genetic diversity in 38 complete genomes of SARS-CoV-2, publicly available on the National Center for Biotechnology Information (NCBI) platform and from six countries in South America (Brazil, Chile, Peru, Colombia, Uruguay and Venezuela with 16, 11, 1, 1, 1, 7 haplotypes, respectively), all with an extension of 29,906 bp and Phred values [≥] 40. The specific methodologies for Paired FST estimators, Molecular Variance (AMOVA), Genetic Distance, mismatch, demographic and spatial expansion analyses, molecular diversity and evolutionary divergence time analyses, were obtained using 20,000 random permutation. This stage is the most used in the LaBECom protocols because it allows to know the genetic structure of populations measuring their variances, this methodology, first defined by Cockerham in 1969 and and, later adapted by other researchers, is essentially similar to other approaches based on analyses of gene frequency variance, but takes into account the number of mutations between haplotypes. ./cache/cord-346280-7sw30bsz.txt ./txt/cord-346280-7sw30bsz.txt