id	author	title	date	pages	extension	mime	words	sentences	flesch	summary	cache	txt
cord-312336-784izxqd	Fouret, Julien	Sequencing the Genome of Indian Flying Fox, Natural Reservoir of Nipah Virus, Using Hybrid Assembly and Conservative Secondary Scaffolding	2020-07-29		.txt	text/plain	7527	389	53	medius genome, assembled by this method, has a length of 1,985 Mb and consists of 33,613 contigs and 16,113 scaffolds with an NG50 of 19 Mb. At least 22.5% of the assembled sequences is covered by interspersed repeats already described in other species and 19,823 coding genes are annotated. Then, we improve the assembly using secondary scaffolding methods, AGOUTI (gene-based) and Ragout (reference-assisted), using RNA seq data obtained with an Illumina 75 bp paired-end sequencing. medius with a length of 1,985 Mb, consisting of 33,613 contigs and 16,113 scaffolds with a NG50 of 19 Mb. Identified repeat elements covered 22.5% of the assembled sequences and 19,823 coding genes were annotated, thus providing the first genome sequence of this bat species and making it available for further studies and better understanding of the mechanisms of Nipah virus emergence.	./cache/cord-312336-784izxqd.txt	./txt/cord-312336-784izxqd.txt