id sid tid token lemma pos work_kv3srcrerrazfgb2arzc4pde5q 1 1 PATACSDB PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 1 2 --- --- : work_kv3srcrerrazfgb2arzc4pde5q 1 3 the the DT work_kv3srcrerrazfgb2arzc4pde5q 1 4 database database NN work_kv3srcrerrazfgb2arzc4pde5q 1 5 of of IN work_kv3srcrerrazfgb2arzc4pde5q 1 6 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 1 7 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 1 8 attenuators attenuator NNS work_kv3srcrerrazfgb2arzc4pde5q 1 9 in in IN work_kv3srcrerrazfgb2arzc4pde5q 1 10 coding code VBG work_kv3srcrerrazfgb2arzc4pde5q 1 11 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 1 12 Submitted submit VBD work_kv3srcrerrazfgb2arzc4pde5q 1 13 2 2 CD work_kv3srcrerrazfgb2arzc4pde5q 1 14 December December NNP work_kv3srcrerrazfgb2arzc4pde5q 1 15 2015 2015 CD work_kv3srcrerrazfgb2arzc4pde5q 1 16 Accepted accept VBD work_kv3srcrerrazfgb2arzc4pde5q 1 17 17 17 CD work_kv3srcrerrazfgb2arzc4pde5q 1 18 January January NNP work_kv3srcrerrazfgb2arzc4pde5q 1 19 2016 2016 CD work_kv3srcrerrazfgb2arzc4pde5q 1 20 Published publish VBD work_kv3srcrerrazfgb2arzc4pde5q 1 21 3 3 CD work_kv3srcrerrazfgb2arzc4pde5q 1 22 February February NNP work_kv3srcrerrazfgb2arzc4pde5q 1 23 2016 2016 CD work_kv3srcrerrazfgb2arzc4pde5q 1 24 Corresponding Corresponding NNP work_kv3srcrerrazfgb2arzc4pde5q 1 25 author author NN work_kv3srcrerrazfgb2arzc4pde5q 1 26 Pawel Pawel NNP work_kv3srcrerrazfgb2arzc4pde5q 1 27 Szczesny Szczesny NNP work_kv3srcrerrazfgb2arzc4pde5q 1 28 , , , work_kv3srcrerrazfgb2arzc4pde5q 1 29 szczesny@ibb.waw.pl szczesny@ibb.waw.pl NN work_kv3srcrerrazfgb2arzc4pde5q 1 30 Academic academic JJ work_kv3srcrerrazfgb2arzc4pde5q 1 31 editor editor NN work_kv3srcrerrazfgb2arzc4pde5q 1 32 Tak Tak NNP work_kv3srcrerrazfgb2arzc4pde5q 1 33 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 1 34 Wah Wah NNP work_kv3srcrerrazfgb2arzc4pde5q 1 35 Lam Lam NNP work_kv3srcrerrazfgb2arzc4pde5q 1 36 Additional Additional NNP work_kv3srcrerrazfgb2arzc4pde5q 1 37 Information Information NNP work_kv3srcrerrazfgb2arzc4pde5q 1 38 and and CC work_kv3srcrerrazfgb2arzc4pde5q 1 39 Declarations declaration NNS work_kv3srcrerrazfgb2arzc4pde5q 1 40 can can MD work_kv3srcrerrazfgb2arzc4pde5q 1 41 be be VB work_kv3srcrerrazfgb2arzc4pde5q 1 42 found find VBN work_kv3srcrerrazfgb2arzc4pde5q 1 43 on on IN work_kv3srcrerrazfgb2arzc4pde5q 1 44 page page NN work_kv3srcrerrazfgb2arzc4pde5q 1 45 5 5 CD work_kv3srcrerrazfgb2arzc4pde5q 1 46 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 1 47 10.7717 10.7717 CD work_kv3srcrerrazfgb2arzc4pde5q 1 48 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 1 49 peerj peerj NNP work_kv3srcrerrazfgb2arzc4pde5q 1 50 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 1 51 cs.45 cs.45 NNP work_kv3srcrerrazfgb2arzc4pde5q 1 52 Copyright copyright NN work_kv3srcrerrazfgb2arzc4pde5q 1 53 2016 2016 CD work_kv3srcrerrazfgb2arzc4pde5q 1 54 Habich Habich NNP work_kv3srcrerrazfgb2arzc4pde5q 1 55 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 1 56 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 1 57 . . . work_kv3srcrerrazfgb2arzc4pde5q 2 1 Distributed distribute VBN work_kv3srcrerrazfgb2arzc4pde5q 2 2 under under IN work_kv3srcrerrazfgb2arzc4pde5q 2 3 Creative Creative NNP work_kv3srcrerrazfgb2arzc4pde5q 2 4 Commons Commons NNP work_kv3srcrerrazfgb2arzc4pde5q 2 5 CC CC NNP work_kv3srcrerrazfgb2arzc4pde5q 2 6 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 2 7 BY BY NNP work_kv3srcrerrazfgb2arzc4pde5q 2 8 4.0 4.0 CD work_kv3srcrerrazfgb2arzc4pde5q 2 9 OPEN open JJ work_kv3srcrerrazfgb2arzc4pde5q 2 10 ACCESS access NN work_kv3srcrerrazfgb2arzc4pde5q 2 11 PATACSDB PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 2 12 — — : work_kv3srcrerrazfgb2arzc4pde5q 2 13 the the DT work_kv3srcrerrazfgb2arzc4pde5q 2 14 database database NN work_kv3srcrerrazfgb2arzc4pde5q 2 15 of of IN work_kv3srcrerrazfgb2arzc4pde5q 2 16 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 2 17 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 2 18 attenuators attenuator NNS work_kv3srcrerrazfgb2arzc4pde5q 2 19 in in IN work_kv3srcrerrazfgb2arzc4pde5q 2 20 coding code VBG work_kv3srcrerrazfgb2arzc4pde5q 2 21 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 2 22 Malgorzata Malgorzata NNP work_kv3srcrerrazfgb2arzc4pde5q 2 23 Habich1 Habich1 NNP work_kv3srcrerrazfgb2arzc4pde5q 2 24 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 25 Sergej Sergej NNP work_kv3srcrerrazfgb2arzc4pde5q 2 26 Djuranovic2 Djuranovic2 NNP work_kv3srcrerrazfgb2arzc4pde5q 2 27 and and CC work_kv3srcrerrazfgb2arzc4pde5q 2 28 Pawel Pawel NNP work_kv3srcrerrazfgb2arzc4pde5q 2 29 Szczesny1 Szczesny1 NNP work_kv3srcrerrazfgb2arzc4pde5q 2 30 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 31 3 3 CD work_kv3srcrerrazfgb2arzc4pde5q 2 32 1 1 CD work_kv3srcrerrazfgb2arzc4pde5q 2 33 Institute Institute NNP work_kv3srcrerrazfgb2arzc4pde5q 2 34 of of IN work_kv3srcrerrazfgb2arzc4pde5q 2 35 Biochemistry Biochemistry NNP work_kv3srcrerrazfgb2arzc4pde5q 2 36 and and CC work_kv3srcrerrazfgb2arzc4pde5q 2 37 Biophysics Biophysics NNP work_kv3srcrerrazfgb2arzc4pde5q 2 38 Polish Polish NNP work_kv3srcrerrazfgb2arzc4pde5q 2 39 Academy Academy NNP work_kv3srcrerrazfgb2arzc4pde5q 2 40 of of IN work_kv3srcrerrazfgb2arzc4pde5q 2 41 Sciences Sciences NNPS work_kv3srcrerrazfgb2arzc4pde5q 2 42 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 43 Department Department NNP work_kv3srcrerrazfgb2arzc4pde5q 2 44 of of IN work_kv3srcrerrazfgb2arzc4pde5q 2 45 Bioinformatics Bioinformatics NNP work_kv3srcrerrazfgb2arzc4pde5q 2 46 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 47 Warsaw Warsaw NNP work_kv3srcrerrazfgb2arzc4pde5q 2 48 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 49 Poland Poland NNP work_kv3srcrerrazfgb2arzc4pde5q 2 50 2 2 CD work_kv3srcrerrazfgb2arzc4pde5q 2 51 Department Department NNP work_kv3srcrerrazfgb2arzc4pde5q 2 52 of of IN work_kv3srcrerrazfgb2arzc4pde5q 2 53 Cell Cell NNP work_kv3srcrerrazfgb2arzc4pde5q 2 54 Biology Biology NNP work_kv3srcrerrazfgb2arzc4pde5q 2 55 and and CC work_kv3srcrerrazfgb2arzc4pde5q 2 56 Physiology Physiology NNP work_kv3srcrerrazfgb2arzc4pde5q 2 57 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 58 Washington Washington NNP work_kv3srcrerrazfgb2arzc4pde5q 2 59 University University NNP work_kv3srcrerrazfgb2arzc4pde5q 2 60 School School NNP work_kv3srcrerrazfgb2arzc4pde5q 2 61 of of IN work_kv3srcrerrazfgb2arzc4pde5q 2 62 Medicine Medicine NNP work_kv3srcrerrazfgb2arzc4pde5q 2 63 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 64 Saint Saint NNP work_kv3srcrerrazfgb2arzc4pde5q 2 65 Louis Louis NNP work_kv3srcrerrazfgb2arzc4pde5q 2 66 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 67 MO MO NNP work_kv3srcrerrazfgb2arzc4pde5q 2 68 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 69 United United NNP work_kv3srcrerrazfgb2arzc4pde5q 2 70 States States NNP work_kv3srcrerrazfgb2arzc4pde5q 2 71 of of IN work_kv3srcrerrazfgb2arzc4pde5q 2 72 America America NNP work_kv3srcrerrazfgb2arzc4pde5q 2 73 3 3 CD work_kv3srcrerrazfgb2arzc4pde5q 2 74 Faculty Faculty NNP work_kv3srcrerrazfgb2arzc4pde5q 2 75 of of IN work_kv3srcrerrazfgb2arzc4pde5q 2 76 Biology Biology NNP work_kv3srcrerrazfgb2arzc4pde5q 2 77 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 78 Institute Institute NNP work_kv3srcrerrazfgb2arzc4pde5q 2 79 of of IN work_kv3srcrerrazfgb2arzc4pde5q 2 80 Experimental Experimental NNP work_kv3srcrerrazfgb2arzc4pde5q 2 81 Plant Plant NNP work_kv3srcrerrazfgb2arzc4pde5q 2 82 Biology Biology NNP work_kv3srcrerrazfgb2arzc4pde5q 2 83 and and CC work_kv3srcrerrazfgb2arzc4pde5q 2 84 Biotechnology Biotechnology NNP work_kv3srcrerrazfgb2arzc4pde5q 2 85 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 86 University University NNP work_kv3srcrerrazfgb2arzc4pde5q 2 87 of of IN work_kv3srcrerrazfgb2arzc4pde5q 2 88 Warsaw Warsaw NNP work_kv3srcrerrazfgb2arzc4pde5q 2 89 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 90 Warsaw Warsaw NNP work_kv3srcrerrazfgb2arzc4pde5q 2 91 , , , work_kv3srcrerrazfgb2arzc4pde5q 2 92 Poland Poland NNP work_kv3srcrerrazfgb2arzc4pde5q 2 93 ABSTRACT ABSTRACT NNP work_kv3srcrerrazfgb2arzc4pde5q 2 94 Recent recent JJ work_kv3srcrerrazfgb2arzc4pde5q 2 95 additions addition NNS work_kv3srcrerrazfgb2arzc4pde5q 2 96 to to IN work_kv3srcrerrazfgb2arzc4pde5q 2 97 the the DT work_kv3srcrerrazfgb2arzc4pde5q 2 98 repertoire repertoire NN work_kv3srcrerrazfgb2arzc4pde5q 2 99 of of IN work_kv3srcrerrazfgb2arzc4pde5q 2 100 gene gene NN work_kv3srcrerrazfgb2arzc4pde5q 2 101 expression expression NN work_kv3srcrerrazfgb2arzc4pde5q 2 102 regulatory regulatory JJ work_kv3srcrerrazfgb2arzc4pde5q 2 103 mechanisms mechanism NNS work_kv3srcrerrazfgb2arzc4pde5q 2 104 are be VBP work_kv3srcrerrazfgb2arzc4pde5q 2 105 polyadenylate polyadenylate JJ work_kv3srcrerrazfgb2arzc4pde5q 2 106 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 2 107 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 2 108 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 2 109 tracks track VBZ work_kv3srcrerrazfgb2arzc4pde5q 2 110 encoding encode VBG work_kv3srcrerrazfgb2arzc4pde5q 2 111 for for IN work_kv3srcrerrazfgb2arzc4pde5q 2 112 poly poly NN work_kv3srcrerrazfgb2arzc4pde5q 2 113 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 2 114 lysine lysine NN work_kv3srcrerrazfgb2arzc4pde5q 2 115 runs run NNS work_kv3srcrerrazfgb2arzc4pde5q 2 116 in in IN work_kv3srcrerrazfgb2arzc4pde5q 2 117 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 2 118 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 2 119 . . . work_kv3srcrerrazfgb2arzc4pde5q 3 1 Such such JJ work_kv3srcrerrazfgb2arzc4pde5q 3 2 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 3 3 stall stall VBP work_kv3srcrerrazfgb2arzc4pde5q 3 4 the the DT work_kv3srcrerrazfgb2arzc4pde5q 3 5 translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 3 6 apparatus apparatus NN work_kv3srcrerrazfgb2arzc4pde5q 3 7 and and CC work_kv3srcrerrazfgb2arzc4pde5q 3 8 induce induce NN work_kv3srcrerrazfgb2arzc4pde5q 3 9 frameshifting frameshifte VBG work_kv3srcrerrazfgb2arzc4pde5q 3 10 independently independently RB work_kv3srcrerrazfgb2arzc4pde5q 3 11 of of IN work_kv3srcrerrazfgb2arzc4pde5q 3 12 the the DT work_kv3srcrerrazfgb2arzc4pde5q 3 13 effects effect NNS work_kv3srcrerrazfgb2arzc4pde5q 3 14 of of IN work_kv3srcrerrazfgb2arzc4pde5q 3 15 charged charge VBN work_kv3srcrerrazfgb2arzc4pde5q 3 16 nascent nascent JJ work_kv3srcrerrazfgb2arzc4pde5q 3 17 poly poly NNP work_kv3srcrerrazfgb2arzc4pde5q 3 18 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 3 19 lysine lysine JJ work_kv3srcrerrazfgb2arzc4pde5q 3 20 sequence sequence NN work_kv3srcrerrazfgb2arzc4pde5q 3 21 on on IN work_kv3srcrerrazfgb2arzc4pde5q 3 22 the the DT work_kv3srcrerrazfgb2arzc4pde5q 3 23 ribosome ribosome JJ work_kv3srcrerrazfgb2arzc4pde5q 3 24 exit exit NN work_kv3srcrerrazfgb2arzc4pde5q 3 25 channel channel NN work_kv3srcrerrazfgb2arzc4pde5q 3 26 . . . work_kv3srcrerrazfgb2arzc4pde5q 4 1 As as IN work_kv3srcrerrazfgb2arzc4pde5q 4 2 such such JJ work_kv3srcrerrazfgb2arzc4pde5q 4 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 4 4 they -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 4 5 substantially substantially RB work_kv3srcrerrazfgb2arzc4pde5q 4 6 influence influence VBP work_kv3srcrerrazfgb2arzc4pde5q 4 7 the the DT work_kv3srcrerrazfgb2arzc4pde5q 4 8 stability stability NN work_kv3srcrerrazfgb2arzc4pde5q 4 9 of of IN work_kv3srcrerrazfgb2arzc4pde5q 4 10 mRNA mRNA NNP work_kv3srcrerrazfgb2arzc4pde5q 4 11 and and CC work_kv3srcrerrazfgb2arzc4pde5q 4 12 the the DT work_kv3srcrerrazfgb2arzc4pde5q 4 13 amount amount NN work_kv3srcrerrazfgb2arzc4pde5q 4 14 of of IN work_kv3srcrerrazfgb2arzc4pde5q 4 15 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 4 16 produced produce VBN work_kv3srcrerrazfgb2arzc4pde5q 4 17 from from IN work_kv3srcrerrazfgb2arzc4pde5q 4 18 a a DT work_kv3srcrerrazfgb2arzc4pde5q 4 19 given give VBN work_kv3srcrerrazfgb2arzc4pde5q 4 20 transcript transcript NN work_kv3srcrerrazfgb2arzc4pde5q 4 21 . . . work_kv3srcrerrazfgb2arzc4pde5q 5 1 Single single JJ work_kv3srcrerrazfgb2arzc4pde5q 5 2 base base NN work_kv3srcrerrazfgb2arzc4pde5q 5 3 changes change NNS work_kv3srcrerrazfgb2arzc4pde5q 5 4 in in IN work_kv3srcrerrazfgb2arzc4pde5q 5 5 these these DT work_kv3srcrerrazfgb2arzc4pde5q 5 6 regions region NNS work_kv3srcrerrazfgb2arzc4pde5q 5 7 are be VBP work_kv3srcrerrazfgb2arzc4pde5q 5 8 enough enough JJ work_kv3srcrerrazfgb2arzc4pde5q 5 9 to to TO work_kv3srcrerrazfgb2arzc4pde5q 5 10 exert exert VB work_kv3srcrerrazfgb2arzc4pde5q 5 11 a a DT work_kv3srcrerrazfgb2arzc4pde5q 5 12 measurable measurable JJ work_kv3srcrerrazfgb2arzc4pde5q 5 13 response response NN work_kv3srcrerrazfgb2arzc4pde5q 5 14 on on IN work_kv3srcrerrazfgb2arzc4pde5q 5 15 both both DT work_kv3srcrerrazfgb2arzc4pde5q 5 16 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 5 17 and and CC work_kv3srcrerrazfgb2arzc4pde5q 5 18 mRNA mRNA NNP work_kv3srcrerrazfgb2arzc4pde5q 5 19 abundance abundance NN work_kv3srcrerrazfgb2arzc4pde5q 5 20 ; ; : work_kv3srcrerrazfgb2arzc4pde5q 5 21 this this DT work_kv3srcrerrazfgb2arzc4pde5q 5 22 makes make VBZ work_kv3srcrerrazfgb2arzc4pde5q 5 23 each each DT work_kv3srcrerrazfgb2arzc4pde5q 5 24 of of IN work_kv3srcrerrazfgb2arzc4pde5q 5 25 these these DT work_kv3srcrerrazfgb2arzc4pde5q 5 26 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 5 27 a a DT work_kv3srcrerrazfgb2arzc4pde5q 5 28 potentially potentially RB work_kv3srcrerrazfgb2arzc4pde5q 5 29 interesting interesting JJ work_kv3srcrerrazfgb2arzc4pde5q 5 30 case case NN work_kv3srcrerrazfgb2arzc4pde5q 5 31 study study NN work_kv3srcrerrazfgb2arzc4pde5q 5 32 for for IN work_kv3srcrerrazfgb2arzc4pde5q 5 33 the the DT work_kv3srcrerrazfgb2arzc4pde5q 5 34 effects effect NNS work_kv3srcrerrazfgb2arzc4pde5q 5 35 of of IN work_kv3srcrerrazfgb2arzc4pde5q 5 36 synonymous synonymous JJ work_kv3srcrerrazfgb2arzc4pde5q 5 37 mutation mutation NN work_kv3srcrerrazfgb2arzc4pde5q 5 38 , , , work_kv3srcrerrazfgb2arzc4pde5q 5 39 gene gene NN work_kv3srcrerrazfgb2arzc4pde5q 5 40 dosage dosage NN work_kv3srcrerrazfgb2arzc4pde5q 5 41 balance balance NN work_kv3srcrerrazfgb2arzc4pde5q 5 42 and and CC work_kv3srcrerrazfgb2arzc4pde5q 5 43 natural natural JJ work_kv3srcrerrazfgb2arzc4pde5q 5 44 frameshifting frameshifting NN work_kv3srcrerrazfgb2arzc4pde5q 5 45 . . . work_kv3srcrerrazfgb2arzc4pde5q 6 1 Here here RB work_kv3srcrerrazfgb2arzc4pde5q 6 2 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 6 3 present present VBP work_kv3srcrerrazfgb2arzc4pde5q 6 4 PATACSDB PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 6 5 , , , work_kv3srcrerrazfgb2arzc4pde5q 6 6 a a DT work_kv3srcrerrazfgb2arzc4pde5q 6 7 resource resource NN work_kv3srcrerrazfgb2arzc4pde5q 6 8 that that WDT work_kv3srcrerrazfgb2arzc4pde5q 6 9 contain contain VBP work_kv3srcrerrazfgb2arzc4pde5q 6 10 a a DT work_kv3srcrerrazfgb2arzc4pde5q 6 11 comprehensive comprehensive JJ work_kv3srcrerrazfgb2arzc4pde5q 6 12 list list NN work_kv3srcrerrazfgb2arzc4pde5q 6 13 of of IN work_kv3srcrerrazfgb2arzc4pde5q 6 14 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 6 15 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 6 16 from from IN work_kv3srcrerrazfgb2arzc4pde5q 6 17 over over IN work_kv3srcrerrazfgb2arzc4pde5q 6 18 250 250 CD work_kv3srcrerrazfgb2arzc4pde5q 6 19 eukaryotic eukaryotic JJ work_kv3srcrerrazfgb2arzc4pde5q 6 20 genomes genome NNS work_kv3srcrerrazfgb2arzc4pde5q 6 21 . . . work_kv3srcrerrazfgb2arzc4pde5q 7 1 Our -PRON- PRP$ work_kv3srcrerrazfgb2arzc4pde5q 7 2 data data NN work_kv3srcrerrazfgb2arzc4pde5q 7 3 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 7 4 based base VBN work_kv3srcrerrazfgb2arzc4pde5q 7 5 on on IN work_kv3srcrerrazfgb2arzc4pde5q 7 6 the the DT work_kv3srcrerrazfgb2arzc4pde5q 7 7 Ensembl Ensembl NNP work_kv3srcrerrazfgb2arzc4pde5q 7 8 genomic genomic JJ work_kv3srcrerrazfgb2arzc4pde5q 7 9 database database NN work_kv3srcrerrazfgb2arzc4pde5q 7 10 of of IN work_kv3srcrerrazfgb2arzc4pde5q 7 11 coding code VBG work_kv3srcrerrazfgb2arzc4pde5q 7 12 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 7 13 and and CC work_kv3srcrerrazfgb2arzc4pde5q 7 14 filtered filter VBN work_kv3srcrerrazfgb2arzc4pde5q 7 15 with with IN work_kv3srcrerrazfgb2arzc4pde5q 7 16 algorithm algorithm NN work_kv3srcrerrazfgb2arzc4pde5q 7 17 of of IN work_kv3srcrerrazfgb2arzc4pde5q 7 18 12A-1 12a-1 CD work_kv3srcrerrazfgb2arzc4pde5q 7 19 which which WDT work_kv3srcrerrazfgb2arzc4pde5q 7 20 selects select VBZ work_kv3srcrerrazfgb2arzc4pde5q 7 21 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 7 22 of of IN work_kv3srcrerrazfgb2arzc4pde5q 7 23 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 7 24 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 7 25 with with IN work_kv3srcrerrazfgb2arzc4pde5q 7 26 a a DT work_kv3srcrerrazfgb2arzc4pde5q 7 27 minimal minimal JJ work_kv3srcrerrazfgb2arzc4pde5q 7 28 length length NN work_kv3srcrerrazfgb2arzc4pde5q 7 29 of of IN work_kv3srcrerrazfgb2arzc4pde5q 7 30 12 12 CD work_kv3srcrerrazfgb2arzc4pde5q 7 31 A a NN work_kv3srcrerrazfgb2arzc4pde5q 7 32 ’s ’s NN work_kv3srcrerrazfgb2arzc4pde5q 7 33 allowing allow VBG work_kv3srcrerrazfgb2arzc4pde5q 7 34 for for IN work_kv3srcrerrazfgb2arzc4pde5q 7 35 one one CD work_kv3srcrerrazfgb2arzc4pde5q 7 36 mismatched mismatch VBN work_kv3srcrerrazfgb2arzc4pde5q 7 37 base base NN work_kv3srcrerrazfgb2arzc4pde5q 7 38 . . . work_kv3srcrerrazfgb2arzc4pde5q 8 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 8 2 PATACSDB PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 8 3 database database NN work_kv3srcrerrazfgb2arzc4pde5q 8 4 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 8 5 accessible accessible JJ work_kv3srcrerrazfgb2arzc4pde5q 8 6 at at IN work_kv3srcrerrazfgb2arzc4pde5q 8 7 : : : work_kv3srcrerrazfgb2arzc4pde5q 8 8 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NNP work_kv3srcrerrazfgb2arzc4pde5q 8 9 . . . work_kv3srcrerrazfgb2arzc4pde5q 9 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 9 2 source source NN work_kv3srcrerrazfgb2arzc4pde5q 9 3 code code NN work_kv3srcrerrazfgb2arzc4pde5q 9 4 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 9 5 available available JJ work_kv3srcrerrazfgb2arzc4pde5q 9 6 at at IN work_kv3srcrerrazfgb2arzc4pde5q 9 7 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 9 8 , , , work_kv3srcrerrazfgb2arzc4pde5q 9 9 and and CC work_kv3srcrerrazfgb2arzc4pde5q 9 10 it -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 9 11 includes include VBZ work_kv3srcrerrazfgb2arzc4pde5q 9 12 the the DT work_kv3srcrerrazfgb2arzc4pde5q 9 13 scripts script NNS work_kv3srcrerrazfgb2arzc4pde5q 9 14 with with IN work_kv3srcrerrazfgb2arzc4pde5q 9 15 which which WDT work_kv3srcrerrazfgb2arzc4pde5q 9 16 the the DT work_kv3srcrerrazfgb2arzc4pde5q 9 17 database database NN work_kv3srcrerrazfgb2arzc4pde5q 9 18 can can MD work_kv3srcrerrazfgb2arzc4pde5q 9 19 be be VB work_kv3srcrerrazfgb2arzc4pde5q 9 20 recreated recreate VBN work_kv3srcrerrazfgb2arzc4pde5q 9 21 . . . work_kv3srcrerrazfgb2arzc4pde5q 10 1 Subjects Subjects NNP work_kv3srcrerrazfgb2arzc4pde5q 10 2 Bioinformatics Bioinformatics NNPS work_kv3srcrerrazfgb2arzc4pde5q 10 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 10 4 Databases database VBZ work_kv3srcrerrazfgb2arzc4pde5q 10 5 Keywords Keywords NNPS work_kv3srcrerrazfgb2arzc4pde5q 10 6 Ribosome Ribosome NNP work_kv3srcrerrazfgb2arzc4pde5q 10 7 stalling stalling NN work_kv3srcrerrazfgb2arzc4pde5q 10 8 , , , work_kv3srcrerrazfgb2arzc4pde5q 10 9 Gene gene NN work_kv3srcrerrazfgb2arzc4pde5q 10 10 regulation regulation NN work_kv3srcrerrazfgb2arzc4pde5q 10 11 , , , work_kv3srcrerrazfgb2arzc4pde5q 10 12 Eukaryotic eukaryotic JJ work_kv3srcrerrazfgb2arzc4pde5q 10 13 genomes genome NNS work_kv3srcrerrazfgb2arzc4pde5q 10 14 , , , work_kv3srcrerrazfgb2arzc4pde5q 10 15 mRNA mRNA NFP work_kv3srcrerrazfgb2arzc4pde5q 10 16 stability stability NN work_kv3srcrerrazfgb2arzc4pde5q 10 17 , , , work_kv3srcrerrazfgb2arzc4pde5q 10 18 Translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 10 19 BACKGROUND background NN work_kv3srcrerrazfgb2arzc4pde5q 10 20 The the DT work_kv3srcrerrazfgb2arzc4pde5q 10 21 classical classical JJ work_kv3srcrerrazfgb2arzc4pde5q 10 22 view view NN work_kv3srcrerrazfgb2arzc4pde5q 10 23 of of IN work_kv3srcrerrazfgb2arzc4pde5q 10 24 the the DT work_kv3srcrerrazfgb2arzc4pde5q 10 25 genetic genetic JJ work_kv3srcrerrazfgb2arzc4pde5q 10 26 information information NN work_kv3srcrerrazfgb2arzc4pde5q 10 27 flow flow NN work_kv3srcrerrazfgb2arzc4pde5q 10 28 inside inside IN work_kv3srcrerrazfgb2arzc4pde5q 10 29 living living NN work_kv3srcrerrazfgb2arzc4pde5q 10 30 cells cell NNS work_kv3srcrerrazfgb2arzc4pde5q 10 31 — — : work_kv3srcrerrazfgb2arzc4pde5q 10 32 the the DT work_kv3srcrerrazfgb2arzc4pde5q 10 33 transcription transcription NN work_kv3srcrerrazfgb2arzc4pde5q 10 34 from from IN work_kv3srcrerrazfgb2arzc4pde5q 10 35 DNA DNA NNP work_kv3srcrerrazfgb2arzc4pde5q 10 36 to to IN work_kv3srcrerrazfgb2arzc4pde5q 10 37 RNA RNA NNP work_kv3srcrerrazfgb2arzc4pde5q 10 38 and and CC work_kv3srcrerrazfgb2arzc4pde5q 10 39 finally finally RB work_kv3srcrerrazfgb2arzc4pde5q 10 40 translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 10 41 of of IN work_kv3srcrerrazfgb2arzc4pde5q 10 42 mRNA mRNA NNS work_kv3srcrerrazfgb2arzc4pde5q 10 43 into into IN work_kv3srcrerrazfgb2arzc4pde5q 10 44 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 10 45 — — : work_kv3srcrerrazfgb2arzc4pde5q 10 46 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 10 47 a a DT work_kv3srcrerrazfgb2arzc4pde5q 10 48 subject subject NN work_kv3srcrerrazfgb2arzc4pde5q 10 49 of of IN work_kv3srcrerrazfgb2arzc4pde5q 10 50 continous continous JJ work_kv3srcrerrazfgb2arzc4pde5q 10 51 modification modification NN work_kv3srcrerrazfgb2arzc4pde5q 10 52 for for IN work_kv3srcrerrazfgb2arzc4pde5q 10 53 both both DT work_kv3srcrerrazfgb2arzc4pde5q 10 54 direction direction NN work_kv3srcrerrazfgb2arzc4pde5q 10 55 of of IN work_kv3srcrerrazfgb2arzc4pde5q 10 56 the the DT work_kv3srcrerrazfgb2arzc4pde5q 10 57 flow flow NN work_kv3srcrerrazfgb2arzc4pde5q 10 58 and and CC work_kv3srcrerrazfgb2arzc4pde5q 10 59 the the DT work_kv3srcrerrazfgb2arzc4pde5q 10 60 number number NN work_kv3srcrerrazfgb2arzc4pde5q 10 61 of of IN work_kv3srcrerrazfgb2arzc4pde5q 10 62 players player NNS work_kv3srcrerrazfgb2arzc4pde5q 10 63 involved involve VBN work_kv3srcrerrazfgb2arzc4pde5q 10 64 . . . work_kv3srcrerrazfgb2arzc4pde5q 11 1 After after IN work_kv3srcrerrazfgb2arzc4pde5q 11 2 decades decade NNS work_kv3srcrerrazfgb2arzc4pde5q 11 3 of of IN work_kv3srcrerrazfgb2arzc4pde5q 11 4 research research NN work_kv3srcrerrazfgb2arzc4pde5q 11 5 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 11 6 keep keep VBP work_kv3srcrerrazfgb2arzc4pde5q 11 7 accumulating accumulate VBG work_kv3srcrerrazfgb2arzc4pde5q 11 8 evidences evidence NNS work_kv3srcrerrazfgb2arzc4pde5q 11 9 of of IN work_kv3srcrerrazfgb2arzc4pde5q 11 10 several several JJ work_kv3srcrerrazfgb2arzc4pde5q 11 11 control control NN work_kv3srcrerrazfgb2arzc4pde5q 11 12 points point NNS work_kv3srcrerrazfgb2arzc4pde5q 11 13 at at IN work_kv3srcrerrazfgb2arzc4pde5q 11 14 different different JJ work_kv3srcrerrazfgb2arzc4pde5q 11 15 levels level NNS work_kv3srcrerrazfgb2arzc4pde5q 11 16 of of IN work_kv3srcrerrazfgb2arzc4pde5q 11 17 these these DT work_kv3srcrerrazfgb2arzc4pde5q 11 18 processes process NNS work_kv3srcrerrazfgb2arzc4pde5q 11 19 . . . work_kv3srcrerrazfgb2arzc4pde5q 12 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 12 2 past past JJ work_kv3srcrerrazfgb2arzc4pde5q 12 3 studies study NNS work_kv3srcrerrazfgb2arzc4pde5q 12 4 were be VBD work_kv3srcrerrazfgb2arzc4pde5q 12 5 focused focus VBN work_kv3srcrerrazfgb2arzc4pde5q 12 6 on on IN work_kv3srcrerrazfgb2arzc4pde5q 12 7 transcriptional transcriptional JJ work_kv3srcrerrazfgb2arzc4pde5q 12 8 regulation regulation NN work_kv3srcrerrazfgb2arzc4pde5q 12 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 12 10 but but CC work_kv3srcrerrazfgb2arzc4pde5q 12 11 more more RBR work_kv3srcrerrazfgb2arzc4pde5q 12 12 recently recently RB work_kv3srcrerrazfgb2arzc4pde5q 12 13 the the DT work_kv3srcrerrazfgb2arzc4pde5q 12 14 regulation regulation NN work_kv3srcrerrazfgb2arzc4pde5q 12 15 of of IN work_kv3srcrerrazfgb2arzc4pde5q 12 16 gene gene NN work_kv3srcrerrazfgb2arzc4pde5q 12 17 expression expression NN work_kv3srcrerrazfgb2arzc4pde5q 12 18 at at IN work_kv3srcrerrazfgb2arzc4pde5q 12 19 the the DT work_kv3srcrerrazfgb2arzc4pde5q 12 20 level level NN work_kv3srcrerrazfgb2arzc4pde5q 12 21 of of IN work_kv3srcrerrazfgb2arzc4pde5q 12 22 translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 12 23 drew draw VBD work_kv3srcrerrazfgb2arzc4pde5q 12 24 researchers researcher NNS work_kv3srcrerrazfgb2arzc4pde5q 12 25 ’ ’ POS work_kv3srcrerrazfgb2arzc4pde5q 12 26 attention attention NN work_kv3srcrerrazfgb2arzc4pde5q 12 27 . . . work_kv3srcrerrazfgb2arzc4pde5q 13 1 Translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 13 2 regulation regulation NN work_kv3srcrerrazfgb2arzc4pde5q 13 3 generally generally RB work_kv3srcrerrazfgb2arzc4pde5q 13 4 controls control VBZ work_kv3srcrerrazfgb2arzc4pde5q 13 5 the the DT work_kv3srcrerrazfgb2arzc4pde5q 13 6 amount amount NN work_kv3srcrerrazfgb2arzc4pde5q 13 7 of of IN work_kv3srcrerrazfgb2arzc4pde5q 13 8 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 13 9 synthesised synthesise VBN work_kv3srcrerrazfgb2arzc4pde5q 13 10 from from IN work_kv3srcrerrazfgb2arzc4pde5q 13 11 a a DT work_kv3srcrerrazfgb2arzc4pde5q 13 12 given give VBN work_kv3srcrerrazfgb2arzc4pde5q 13 13 mRNA mrna NN work_kv3srcrerrazfgb2arzc4pde5q 13 14 through through IN work_kv3srcrerrazfgb2arzc4pde5q 13 15 several several JJ work_kv3srcrerrazfgb2arzc4pde5q 13 16 mechanisms mechanism NNS work_kv3srcrerrazfgb2arzc4pde5q 13 17 , , , work_kv3srcrerrazfgb2arzc4pde5q 13 18 targeting target VBG work_kv3srcrerrazfgb2arzc4pde5q 13 19 recruitment recruitment NN work_kv3srcrerrazfgb2arzc4pde5q 13 20 of of IN work_kv3srcrerrazfgb2arzc4pde5q 13 21 ribosomes ribosome NNS work_kv3srcrerrazfgb2arzc4pde5q 13 22 to to IN work_kv3srcrerrazfgb2arzc4pde5q 13 23 How how WRB work_kv3srcrerrazfgb2arzc4pde5q 13 24 to to TO work_kv3srcrerrazfgb2arzc4pde5q 13 25 cite cite VB work_kv3srcrerrazfgb2arzc4pde5q 13 26 this this DT work_kv3srcrerrazfgb2arzc4pde5q 13 27 article article NN work_kv3srcrerrazfgb2arzc4pde5q 13 28 Habich Habich NNP work_kv3srcrerrazfgb2arzc4pde5q 13 29 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 13 30 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 13 31 . . . work_kv3srcrerrazfgb2arzc4pde5q 14 1 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 14 2 2016 2016 CD work_kv3srcrerrazfgb2arzc4pde5q 14 3 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 14 4 , , , work_kv3srcrerrazfgb2arzc4pde5q 14 5 PATACSDB PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 14 6 — — : work_kv3srcrerrazfgb2arzc4pde5q 14 7 the the DT work_kv3srcrerrazfgb2arzc4pde5q 14 8 database database NN work_kv3srcrerrazfgb2arzc4pde5q 14 9 of of IN work_kv3srcrerrazfgb2arzc4pde5q 14 10 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 14 11 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 14 12 attenuators attenuator NNS work_kv3srcrerrazfgb2arzc4pde5q 14 13 in in IN work_kv3srcrerrazfgb2arzc4pde5q 14 14 coding code VBG work_kv3srcrerrazfgb2arzc4pde5q 14 15 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 14 16 . . . work_kv3srcrerrazfgb2arzc4pde5q 15 1 PeerJ PeerJ NNP work_kv3srcrerrazfgb2arzc4pde5q 15 2 Comput comput NN work_kv3srcrerrazfgb2arzc4pde5q 15 3 . . . work_kv3srcrerrazfgb2arzc4pde5q 16 1 Sci Sci NNP work_kv3srcrerrazfgb2arzc4pde5q 16 2 . . . work_kv3srcrerrazfgb2arzc4pde5q 17 1 2 2 LS work_kv3srcrerrazfgb2arzc4pde5q 17 2 : : : work_kv3srcrerrazfgb2arzc4pde5q 17 3 e45 e45 CD work_kv3srcrerrazfgb2arzc4pde5q 17 4 ; ; : work_kv3srcrerrazfgb2arzc4pde5q 17 5 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 17 6 10.7717 10.7717 CD work_kv3srcrerrazfgb2arzc4pde5q 17 7 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 17 8 peerj peerj NNP work_kv3srcrerrazfgb2arzc4pde5q 17 9 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 17 10 cs.45 cs.45 NNP work_kv3srcrerrazfgb2arzc4pde5q 17 11 mailto:szczesny@ibb.waw.pl mailto:szczesny@ibb.waw.pl XX work_kv3srcrerrazfgb2arzc4pde5q 17 12 https://peerj.com/academic-boards/editors/ https://peerj.com/academic-boards/editors/ NNP work_kv3srcrerrazfgb2arzc4pde5q 17 13 https://peerj.com/academic-boards/editors/ https://peerj.com/academic-boards/editors/ NNP work_kv3srcrerrazfgb2arzc4pde5q 17 14 http://dx.doi.org/10.7717/peerj-cs.45 http://dx.doi.org/10.7717/peerj-cs.45 RB work_kv3srcrerrazfgb2arzc4pde5q 17 15 http://dx.doi.org/10.7717/peerj-cs.45 http://dx.doi.org/10.7717/peerj-cs.45 RB work_kv3srcrerrazfgb2arzc4pde5q 17 16 http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/ ADD work_kv3srcrerrazfgb2arzc4pde5q 17 17 http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/ ADD work_kv3srcrerrazfgb2arzc4pde5q 17 18 https://peerj.com/computer-science/ https://peerj.com/computer-science/ NNP work_kv3srcrerrazfgb2arzc4pde5q 17 19 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NNP work_kv3srcrerrazfgb2arzc4pde5q 17 20 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NNP work_kv3srcrerrazfgb2arzc4pde5q 17 21 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 22 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 23 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 24 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 25 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 26 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 27 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 28 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 29 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 30 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 31 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 32 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 33 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 34 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 35 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 36 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 37 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 38 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 39 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 40 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 41 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 42 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 43 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 44 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 45 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 46 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 47 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 48 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 49 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 50 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NN work_kv3srcrerrazfgb2arzc4pde5q 17 51 http://sysbio.ibb.waw.pl/patacsdb http://sysbio.ibb.waw.pl/patacsdb NNP work_kv3srcrerrazfgb2arzc4pde5q 17 52 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 53 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 54 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 55 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 56 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 57 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 58 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 59 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 60 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 61 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 62 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 63 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 64 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 65 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 66 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 67 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 68 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 69 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 70 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 71 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 72 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 73 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 74 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 75 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 76 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 77 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 78 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 79 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 80 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 81 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 82 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 83 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 84 http://github.com/habich/PATACSDB http://github.com/habich/PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 17 85 http://dx.doi.org/10.7717/peerj-cs.45 http://dx.doi.org/10.7717/peerj-cs.45 IN work_kv3srcrerrazfgb2arzc4pde5q 17 86 the the DT work_kv3srcrerrazfgb2arzc4pde5q 17 87 transcript transcript NN work_kv3srcrerrazfgb2arzc4pde5q 17 88 , , , work_kv3srcrerrazfgb2arzc4pde5q 17 89 elongation elongation NN work_kv3srcrerrazfgb2arzc4pde5q 17 90 speed speed NN work_kv3srcrerrazfgb2arzc4pde5q 17 91 , , , work_kv3srcrerrazfgb2arzc4pde5q 17 92 termination termination NN work_kv3srcrerrazfgb2arzc4pde5q 17 93 and and CC work_kv3srcrerrazfgb2arzc4pde5q 17 94 as as IN work_kv3srcrerrazfgb2arzc4pde5q 17 95 a a DT work_kv3srcrerrazfgb2arzc4pde5q 17 96 proxy proxy NN work_kv3srcrerrazfgb2arzc4pde5q 17 97 to to IN work_kv3srcrerrazfgb2arzc4pde5q 17 98 all all PDT work_kv3srcrerrazfgb2arzc4pde5q 17 99 these these DT work_kv3srcrerrazfgb2arzc4pde5q 17 100 processes process NNS work_kv3srcrerrazfgb2arzc4pde5q 17 101 mRNA mrna VBP work_kv3srcrerrazfgb2arzc4pde5q 17 102 stability stability NN work_kv3srcrerrazfgb2arzc4pde5q 17 103 . . . work_kv3srcrerrazfgb2arzc4pde5q 18 1 Ribosome ribosome JJ work_kv3srcrerrazfgb2arzc4pde5q 18 2 stalling stalling NN work_kv3srcrerrazfgb2arzc4pde5q 18 3 — — : work_kv3srcrerrazfgb2arzc4pde5q 18 4 the the DT work_kv3srcrerrazfgb2arzc4pde5q 18 5 pausing pausing NN work_kv3srcrerrazfgb2arzc4pde5q 18 6 of of IN work_kv3srcrerrazfgb2arzc4pde5q 18 7 ribosome ribosome NN work_kv3srcrerrazfgb2arzc4pde5q 18 8 during during IN work_kv3srcrerrazfgb2arzc4pde5q 18 9 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 18 10 cycle cycle NN work_kv3srcrerrazfgb2arzc4pde5q 18 11 — — : work_kv3srcrerrazfgb2arzc4pde5q 18 12 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 18 13 recognized recognize VBN work_kv3srcrerrazfgb2arzc4pde5q 18 14 by by IN work_kv3srcrerrazfgb2arzc4pde5q 18 15 components component NNS work_kv3srcrerrazfgb2arzc4pde5q 18 16 of of IN work_kv3srcrerrazfgb2arzc4pde5q 18 17 several several JJ work_kv3srcrerrazfgb2arzc4pde5q 18 18 mRNA mRNA NNP work_kv3srcrerrazfgb2arzc4pde5q 18 19 surveillance surveillance NN work_kv3srcrerrazfgb2arzc4pde5q 18 20 pathways pathway NNS work_kv3srcrerrazfgb2arzc4pde5q 18 21 . . . work_kv3srcrerrazfgb2arzc4pde5q 19 1 As as IN work_kv3srcrerrazfgb2arzc4pde5q 19 2 a a DT work_kv3srcrerrazfgb2arzc4pde5q 19 3 result result NN work_kv3srcrerrazfgb2arzc4pde5q 19 4 of of IN work_kv3srcrerrazfgb2arzc4pde5q 19 5 the the DT work_kv3srcrerrazfgb2arzc4pde5q 19 6 im- im- JJ work_kv3srcrerrazfgb2arzc4pde5q 19 7 peded pede VBN work_kv3srcrerrazfgb2arzc4pde5q 19 8 rate rate NN work_kv3srcrerrazfgb2arzc4pde5q 19 9 of of IN work_kv3srcrerrazfgb2arzc4pde5q 19 10 ribosome ribosome NN work_kv3srcrerrazfgb2arzc4pde5q 19 11 along along IN work_kv3srcrerrazfgb2arzc4pde5q 19 12 the the DT work_kv3srcrerrazfgb2arzc4pde5q 19 13 mRNA mrna NN work_kv3srcrerrazfgb2arzc4pde5q 19 14 , , , work_kv3srcrerrazfgb2arzc4pde5q 19 15 the the DT work_kv3srcrerrazfgb2arzc4pde5q 19 16 transcript transcript NN work_kv3srcrerrazfgb2arzc4pde5q 19 17 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 19 18 endonucleolytically endonucleolytically RB work_kv3srcrerrazfgb2arzc4pde5q 19 19 cleaved cleave VBN work_kv3srcrerrazfgb2arzc4pde5q 19 20 and and CC work_kv3srcrerrazfgb2arzc4pde5q 19 21 nascent nascent JJ work_kv3srcrerrazfgb2arzc4pde5q 19 22 albeit albeit IN work_kv3srcrerrazfgb2arzc4pde5q 19 23 incomplete incomplete JJ work_kv3srcrerrazfgb2arzc4pde5q 19 24 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 19 25 product product NN work_kv3srcrerrazfgb2arzc4pde5q 19 26 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 19 27 degraded degrade VBN work_kv3srcrerrazfgb2arzc4pde5q 19 28 by by IN work_kv3srcrerrazfgb2arzc4pde5q 19 29 proteasome proteasome NN work_kv3srcrerrazfgb2arzc4pde5q 19 30 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 19 31 Shoemaker Shoemaker NNP work_kv3srcrerrazfgb2arzc4pde5q 19 32 & & CC work_kv3srcrerrazfgb2arzc4pde5q 19 33 Green Green NNP work_kv3srcrerrazfgb2arzc4pde5q 19 34 , , , work_kv3srcrerrazfgb2arzc4pde5q 19 35 2012 2012 CD work_kv3srcrerrazfgb2arzc4pde5q 19 36 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 19 37 . . . work_kv3srcrerrazfgb2arzc4pde5q 20 1 Over over IN work_kv3srcrerrazfgb2arzc4pde5q 20 2 the the DT work_kv3srcrerrazfgb2arzc4pde5q 20 3 years year NNS work_kv3srcrerrazfgb2arzc4pde5q 20 4 , , , work_kv3srcrerrazfgb2arzc4pde5q 20 5 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 20 6 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 20 7 got get VBN work_kv3srcrerrazfgb2arzc4pde5q 20 8 to to TO work_kv3srcrerrazfgb2arzc4pde5q 20 9 know know VB work_kv3srcrerrazfgb2arzc4pde5q 20 10 that that IN work_kv3srcrerrazfgb2arzc4pde5q 20 11 certain certain JJ work_kv3srcrerrazfgb2arzc4pde5q 20 12 sequence sequence NN work_kv3srcrerrazfgb2arzc4pde5q 20 13 features feature NNS work_kv3srcrerrazfgb2arzc4pde5q 20 14 can can MD work_kv3srcrerrazfgb2arzc4pde5q 20 15 trigger trigger VB work_kv3srcrerrazfgb2arzc4pde5q 20 16 ribo- ribo- VBN work_kv3srcrerrazfgb2arzc4pde5q 20 17 some some DT work_kv3srcrerrazfgb2arzc4pde5q 20 18 stalling stalling NN work_kv3srcrerrazfgb2arzc4pde5q 20 19 . . . work_kv3srcrerrazfgb2arzc4pde5q 21 1 These these DT work_kv3srcrerrazfgb2arzc4pde5q 21 2 are be VBP work_kv3srcrerrazfgb2arzc4pde5q 21 3 damaged damaged JJ work_kv3srcrerrazfgb2arzc4pde5q 21 4 bases basis NNS work_kv3srcrerrazfgb2arzc4pde5q 21 5 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 21 6 Cruz Cruz NNP work_kv3srcrerrazfgb2arzc4pde5q 21 7 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 21 8 Vera Vera NNP work_kv3srcrerrazfgb2arzc4pde5q 21 9 et et FW work_kv3srcrerrazfgb2arzc4pde5q 21 10 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 21 11 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 21 12 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 13 2004 2004 CD work_kv3srcrerrazfgb2arzc4pde5q 21 14 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 21 15 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 16 stable stable JJ work_kv3srcrerrazfgb2arzc4pde5q 21 17 stem stem NN work_kv3srcrerrazfgb2arzc4pde5q 21 18 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 21 19 loop loop NN work_kv3srcrerrazfgb2arzc4pde5q 21 20 structures structure NNS work_kv3srcrerrazfgb2arzc4pde5q 21 21 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 21 22 Doma Doma NNP work_kv3srcrerrazfgb2arzc4pde5q 21 23 & & CC work_kv3srcrerrazfgb2arzc4pde5q 21 24 Parker Parker NNP work_kv3srcrerrazfgb2arzc4pde5q 21 25 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 26 2006 2006 CD work_kv3srcrerrazfgb2arzc4pde5q 21 27 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 21 28 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 29 rare rare JJ work_kv3srcrerrazfgb2arzc4pde5q 21 30 codons codon NNS work_kv3srcrerrazfgb2arzc4pde5q 21 31 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 21 32 Letzring letzre VBG work_kv3srcrerrazfgb2arzc4pde5q 21 33 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 34 Dean Dean NNP work_kv3srcrerrazfgb2arzc4pde5q 21 35 & & CC work_kv3srcrerrazfgb2arzc4pde5q 21 36 Grayhack Grayhack NNP work_kv3srcrerrazfgb2arzc4pde5q 21 37 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 38 2010 2010 CD work_kv3srcrerrazfgb2arzc4pde5q 21 39 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 21 40 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 41 mRNAs mrnas ADD work_kv3srcrerrazfgb2arzc4pde5q 21 42 lacking lack VBG work_kv3srcrerrazfgb2arzc4pde5q 21 43 stop stop VB work_kv3srcrerrazfgb2arzc4pde5q 21 44 codons codon NNS work_kv3srcrerrazfgb2arzc4pde5q 21 45 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 21 46 so so RB work_kv3srcrerrazfgb2arzc4pde5q 21 47 called call VBN work_kv3srcrerrazfgb2arzc4pde5q 21 48 non non JJ work_kv3srcrerrazfgb2arzc4pde5q 21 49 - - JJ work_kv3srcrerrazfgb2arzc4pde5q 21 50 stop stop VB work_kv3srcrerrazfgb2arzc4pde5q 21 51 mRNAs mrnas ADD work_kv3srcrerrazfgb2arzc4pde5q 21 52 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 21 53 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 21 54 Dimitrova Dimitrova NNP work_kv3srcrerrazfgb2arzc4pde5q 21 55 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 21 56 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 21 57 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 21 58 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 59 2009 2009 CD work_kv3srcrerrazfgb2arzc4pde5q 21 60 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 21 61 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 62 runs run NNS work_kv3srcrerrazfgb2arzc4pde5q 21 63 of of IN work_kv3srcrerrazfgb2arzc4pde5q 21 64 codons codon NNS work_kv3srcrerrazfgb2arzc4pde5q 21 65 that that WDT work_kv3srcrerrazfgb2arzc4pde5q 21 66 encode encode VBP work_kv3srcrerrazfgb2arzc4pde5q 21 67 consecutive consecutive JJ work_kv3srcrerrazfgb2arzc4pde5q 21 68 basic basic JJ work_kv3srcrerrazfgb2arzc4pde5q 21 69 aminoacids aminoacid NNS work_kv3srcrerrazfgb2arzc4pde5q 21 70 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 21 71 Kuroha Kuroha NNP work_kv3srcrerrazfgb2arzc4pde5q 21 72 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 21 73 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 21 74 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 21 75 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 76 2010 2010 CD work_kv3srcrerrazfgb2arzc4pde5q 21 77 ; ; : work_kv3srcrerrazfgb2arzc4pde5q 21 78 Brandman Brandman NNP work_kv3srcrerrazfgb2arzc4pde5q 21 79 et et FW work_kv3srcrerrazfgb2arzc4pde5q 21 80 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 21 81 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 21 82 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 83 2012 2012 CD work_kv3srcrerrazfgb2arzc4pde5q 21 84 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 21 85 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 86 or or CC work_kv3srcrerrazfgb2arzc4pde5q 21 87 finally finally RB work_kv3srcrerrazfgb2arzc4pde5q 21 88 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 89 runs run NNS work_kv3srcrerrazfgb2arzc4pde5q 21 90 of of IN work_kv3srcrerrazfgb2arzc4pde5q 21 91 adenines adenine NNS work_kv3srcrerrazfgb2arzc4pde5q 21 92 encoding encode VBG work_kv3srcrerrazfgb2arzc4pde5q 21 93 poly poly NN work_kv3srcrerrazfgb2arzc4pde5q 21 94 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 21 95 lysine lysine NN work_kv3srcrerrazfgb2arzc4pde5q 21 96 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 21 97 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 21 98 Koutmou Koutmou NNP work_kv3srcrerrazfgb2arzc4pde5q 21 99 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 21 100 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 21 101 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 21 102 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 103 2015 2015 CD work_kv3srcrerrazfgb2arzc4pde5q 21 104 ; ; : work_kv3srcrerrazfgb2arzc4pde5q 21 105 Arthur Arthur NNP work_kv3srcrerrazfgb2arzc4pde5q 21 106 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 21 107 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 21 108 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 21 109 , , , work_kv3srcrerrazfgb2arzc4pde5q 21 110 2015 2015 CD work_kv3srcrerrazfgb2arzc4pde5q 21 111 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 21 112 . . . work_kv3srcrerrazfgb2arzc4pde5q 22 1 We -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 22 2 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 22 3 recently recently RB work_kv3srcrerrazfgb2arzc4pde5q 22 4 shown show VBN work_kv3srcrerrazfgb2arzc4pde5q 22 5 that that IN work_kv3srcrerrazfgb2arzc4pde5q 22 6 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 22 7 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 22 8 trigger trigger VBP work_kv3srcrerrazfgb2arzc4pde5q 22 9 a a DT work_kv3srcrerrazfgb2arzc4pde5q 22 10 response response NN work_kv3srcrerrazfgb2arzc4pde5q 22 11 in in IN work_kv3srcrerrazfgb2arzc4pde5q 22 12 a a DT work_kv3srcrerrazfgb2arzc4pde5q 22 13 different different JJ work_kv3srcrerrazfgb2arzc4pde5q 22 14 manner manner NN work_kv3srcrerrazfgb2arzc4pde5q 22 15 than than IN work_kv3srcrerrazfgb2arzc4pde5q 22 16 runs run NNS work_kv3srcrerrazfgb2arzc4pde5q 22 17 of of IN work_kv3srcrerrazfgb2arzc4pde5q 22 18 basic basic JJ work_kv3srcrerrazfgb2arzc4pde5q 22 19 aminoacids aminoacid NNS work_kv3srcrerrazfgb2arzc4pde5q 22 20 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 22 21 Arthur Arthur NNP work_kv3srcrerrazfgb2arzc4pde5q 22 22 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 22 23 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 22 24 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 22 25 , , , work_kv3srcrerrazfgb2arzc4pde5q 22 26 2015 2015 CD work_kv3srcrerrazfgb2arzc4pde5q 22 27 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 22 28 . . . work_kv3srcrerrazfgb2arzc4pde5q 23 1 In in IN work_kv3srcrerrazfgb2arzc4pde5q 23 2 addition addition NN work_kv3srcrerrazfgb2arzc4pde5q 23 3 to to IN work_kv3srcrerrazfgb2arzc4pde5q 23 4 stalling stall VBG work_kv3srcrerrazfgb2arzc4pde5q 23 5 , , , work_kv3srcrerrazfgb2arzc4pde5q 23 6 they -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 23 7 occasionally occasionally RB work_kv3srcrerrazfgb2arzc4pde5q 23 8 lead lead VBP work_kv3srcrerrazfgb2arzc4pde5q 23 9 to to IN work_kv3srcrerrazfgb2arzc4pde5q 23 10 ribosome ribosome VB work_kv3srcrerrazfgb2arzc4pde5q 23 11 sliding slide VBG work_kv3srcrerrazfgb2arzc4pde5q 23 12 on on IN work_kv3srcrerrazfgb2arzc4pde5q 23 13 mRNA mRNA NNP work_kv3srcrerrazfgb2arzc4pde5q 23 14 transcript transcript NNP work_kv3srcrerrazfgb2arzc4pde5q 23 15 which which WDT work_kv3srcrerrazfgb2arzc4pde5q 23 16 results result VBZ work_kv3srcrerrazfgb2arzc4pde5q 23 17 in in IN work_kv3srcrerrazfgb2arzc4pde5q 23 18 production production NN work_kv3srcrerrazfgb2arzc4pde5q 23 19 of of IN work_kv3srcrerrazfgb2arzc4pde5q 23 20 additional additional JJ work_kv3srcrerrazfgb2arzc4pde5q 23 21 frameshifted frameshifted JJ work_kv3srcrerrazfgb2arzc4pde5q 23 22 product product NN work_kv3srcrerrazfgb2arzc4pde5q 23 23 next next RB work_kv3srcrerrazfgb2arzc4pde5q 23 24 to to IN work_kv3srcrerrazfgb2arzc4pde5q 23 25 the the DT work_kv3srcrerrazfgb2arzc4pde5q 23 26 known known JJ work_kv3srcrerrazfgb2arzc4pde5q 23 27 and and CC work_kv3srcrerrazfgb2arzc4pde5q 23 28 well well RB work_kv3srcrerrazfgb2arzc4pde5q 23 29 annotated annotate VBN work_kv3srcrerrazfgb2arzc4pde5q 23 30 gene gene NN work_kv3srcrerrazfgb2arzc4pde5q 23 31 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 23 32 product product NN work_kv3srcrerrazfgb2arzc4pde5q 23 33 . . . work_kv3srcrerrazfgb2arzc4pde5q 24 1 As as IN work_kv3srcrerrazfgb2arzc4pde5q 24 2 such such JJ work_kv3srcrerrazfgb2arzc4pde5q 24 3 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 24 4 track track NN work_kv3srcrerrazfgb2arzc4pde5q 24 5 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 24 6 may may MD work_kv3srcrerrazfgb2arzc4pde5q 24 7 support support VB work_kv3srcrerrazfgb2arzc4pde5q 24 8 programed programed JJ work_kv3srcrerrazfgb2arzc4pde5q 24 9 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 24 10 frameshifts frameshift NNS work_kv3srcrerrazfgb2arzc4pde5q 24 11 in in IN work_kv3srcrerrazfgb2arzc4pde5q 24 12 such such JJ work_kv3srcrerrazfgb2arzc4pde5q 24 13 mRNA mrna JJ work_kv3srcrerrazfgb2arzc4pde5q 24 14 transcripts transcript NNS work_kv3srcrerrazfgb2arzc4pde5q 24 15 giving give VBG work_kv3srcrerrazfgb2arzc4pde5q 24 16 rise rise NN work_kv3srcrerrazfgb2arzc4pde5q 24 17 to to IN work_kv3srcrerrazfgb2arzc4pde5q 24 18 alternative alternative JJ work_kv3srcrerrazfgb2arzc4pde5q 24 19 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 24 20 products product NNS work_kv3srcrerrazfgb2arzc4pde5q 24 21 from from IN work_kv3srcrerrazfgb2arzc4pde5q 24 22 those those DT work_kv3srcrerrazfgb2arzc4pde5q 24 23 genes gene NNS work_kv3srcrerrazfgb2arzc4pde5q 24 24 . . . work_kv3srcrerrazfgb2arzc4pde5q 25 1 This this DT work_kv3srcrerrazfgb2arzc4pde5q 25 2 feature feature NN work_kv3srcrerrazfgb2arzc4pde5q 25 3 of of IN work_kv3srcrerrazfgb2arzc4pde5q 25 4 polyA polya JJ work_kv3srcrerrazfgb2arzc4pde5q 25 5 track track NN work_kv3srcrerrazfgb2arzc4pde5q 25 6 genes gene NNS work_kv3srcrerrazfgb2arzc4pde5q 25 7 resembles resemble NNS work_kv3srcrerrazfgb2arzc4pde5q 25 8 programmed program VBD work_kv3srcrerrazfgb2arzc4pde5q 25 9 frameshifting frameshifte VBG work_kv3srcrerrazfgb2arzc4pde5q 25 10 observed observe VBN work_kv3srcrerrazfgb2arzc4pde5q 25 11 in in IN work_kv3srcrerrazfgb2arzc4pde5q 25 12 viral viral JJ work_kv3srcrerrazfgb2arzc4pde5q 25 13 genes gene NNS work_kv3srcrerrazfgb2arzc4pde5q 25 14 with with IN work_kv3srcrerrazfgb2arzc4pde5q 25 15 slippery slippery JJ work_kv3srcrerrazfgb2arzc4pde5q 25 16 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 25 17 however however RB work_kv3srcrerrazfgb2arzc4pde5q 25 18 without without IN work_kv3srcrerrazfgb2arzc4pde5q 25 19 a a DT work_kv3srcrerrazfgb2arzc4pde5q 25 20 need need NN work_kv3srcrerrazfgb2arzc4pde5q 25 21 for for IN work_kv3srcrerrazfgb2arzc4pde5q 25 22 additional additional JJ work_kv3srcrerrazfgb2arzc4pde5q 25 23 mRNA mRNA NNS work_kv3srcrerrazfgb2arzc4pde5q 25 24 structures structure NNS work_kv3srcrerrazfgb2arzc4pde5q 25 25 that that WDT work_kv3srcrerrazfgb2arzc4pde5q 25 26 induces induce VBZ work_kv3srcrerrazfgb2arzc4pde5q 25 27 ribosome ribosome VBP work_kv3srcrerrazfgb2arzc4pde5q 25 28 stalling stall VBG work_kv3srcrerrazfgb2arzc4pde5q 25 29 in in IN work_kv3srcrerrazfgb2arzc4pde5q 25 30 known know VBN work_kv3srcrerrazfgb2arzc4pde5q 25 31 viral viral JJ work_kv3srcrerrazfgb2arzc4pde5q 25 32 transcripts transcript NNS work_kv3srcrerrazfgb2arzc4pde5q 25 33 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 25 34 Chen Chen NNP work_kv3srcrerrazfgb2arzc4pde5q 25 35 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 25 36 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 25 37 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 25 38 , , , work_kv3srcrerrazfgb2arzc4pde5q 25 39 2014 2014 CD work_kv3srcrerrazfgb2arzc4pde5q 25 40 ; ; : work_kv3srcrerrazfgb2arzc4pde5q 25 41 Yan Yan NNP work_kv3srcrerrazfgb2arzc4pde5q 25 42 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 25 43 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 25 44 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 25 45 , , , work_kv3srcrerrazfgb2arzc4pde5q 25 46 2015 2015 CD work_kv3srcrerrazfgb2arzc4pde5q 25 47 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 25 48 . . . work_kv3srcrerrazfgb2arzc4pde5q 26 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 26 2 ultimate ultimate JJ work_kv3srcrerrazfgb2arzc4pde5q 26 3 control control NN work_kv3srcrerrazfgb2arzc4pde5q 26 4 over over IN work_kv3srcrerrazfgb2arzc4pde5q 26 5 the the DT work_kv3srcrerrazfgb2arzc4pde5q 26 6 production production NN work_kv3srcrerrazfgb2arzc4pde5q 26 7 and and CC work_kv3srcrerrazfgb2arzc4pde5q 26 8 stability stability NN work_kv3srcrerrazfgb2arzc4pde5q 26 9 of of IN work_kv3srcrerrazfgb2arzc4pde5q 26 10 alternative alternative JJ work_kv3srcrerrazfgb2arzc4pde5q 26 11 transcripts transcript NNS work_kv3srcrerrazfgb2arzc4pde5q 26 12 from from IN work_kv3srcrerrazfgb2arzc4pde5q 26 13 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 26 14 track track NN work_kv3srcrerrazfgb2arzc4pde5q 26 15 genes gene NNS work_kv3srcrerrazfgb2arzc4pde5q 26 16 in in IN work_kv3srcrerrazfgb2arzc4pde5q 26 17 Eukaryotes eukaryote NNS work_kv3srcrerrazfgb2arzc4pde5q 26 18 would would MD work_kv3srcrerrazfgb2arzc4pde5q 26 19 be be VB work_kv3srcrerrazfgb2arzc4pde5q 26 20 based base VBN work_kv3srcrerrazfgb2arzc4pde5q 26 21 on on IN work_kv3srcrerrazfgb2arzc4pde5q 26 22 mRNA mRNA NNP work_kv3srcrerrazfgb2arzc4pde5q 26 23 surveillance surveillance NN work_kv3srcrerrazfgb2arzc4pde5q 26 24 mechanisms mechanism NNS work_kv3srcrerrazfgb2arzc4pde5q 26 25 , , , work_kv3srcrerrazfgb2arzc4pde5q 26 26 mainly mainly RB work_kv3srcrerrazfgb2arzc4pde5q 26 27 non non JJ work_kv3srcrerrazfgb2arzc4pde5q 26 28 - - JJ work_kv3srcrerrazfgb2arzc4pde5q 26 29 sense sense NN work_kv3srcrerrazfgb2arzc4pde5q 26 30 mediated mediate VBN work_kv3srcrerrazfgb2arzc4pde5q 26 31 mRNA mRNA NNS work_kv3srcrerrazfgb2arzc4pde5q 26 32 decay decay NNP work_kv3srcrerrazfgb2arzc4pde5q 26 33 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 26 34 NMD NMD NNP work_kv3srcrerrazfgb2arzc4pde5q 26 35 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 26 36 or or CC work_kv3srcrerrazfgb2arzc4pde5q 26 37 if if IN work_kv3srcrerrazfgb2arzc4pde5q 26 38 the the DT work_kv3srcrerrazfgb2arzc4pde5q 26 39 kinetic kinetic JJ work_kv3srcrerrazfgb2arzc4pde5q 26 40 stall stall NN work_kv3srcrerrazfgb2arzc4pde5q 26 41 persists persist VBZ work_kv3srcrerrazfgb2arzc4pde5q 26 42 by by IN work_kv3srcrerrazfgb2arzc4pde5q 26 43 no no DT work_kv3srcrerrazfgb2arzc4pde5q 26 44 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 26 45 go go VB work_kv3srcrerrazfgb2arzc4pde5q 26 46 mRNA mRNA NFP work_kv3srcrerrazfgb2arzc4pde5q 26 47 decay decay NN work_kv3srcrerrazfgb2arzc4pde5q 26 48 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 26 49 NGD NGD NNP work_kv3srcrerrazfgb2arzc4pde5q 26 50 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 26 51 . . . work_kv3srcrerrazfgb2arzc4pde5q 27 1 PolyA polya JJ work_kv3srcrerrazfgb2arzc4pde5q 27 2 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 27 3 are be VBP work_kv3srcrerrazfgb2arzc4pde5q 27 4 highly highly RB work_kv3srcrerrazfgb2arzc4pde5q 27 5 conserved conserve VBN work_kv3srcrerrazfgb2arzc4pde5q 27 6 in in IN work_kv3srcrerrazfgb2arzc4pde5q 27 7 genes gene NNS work_kv3srcrerrazfgb2arzc4pde5q 27 8 among among IN work_kv3srcrerrazfgb2arzc4pde5q 27 9 Eukaryotes Eukaryotes NNPS work_kv3srcrerrazfgb2arzc4pde5q 27 10 and and CC work_kv3srcrerrazfgb2arzc4pde5q 27 11 it -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 27 12 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 27 13 likely likely JJ work_kv3srcrerrazfgb2arzc4pde5q 27 14 that that IN work_kv3srcrerrazfgb2arzc4pde5q 27 15 they -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 27 16 represent represent VBP work_kv3srcrerrazfgb2arzc4pde5q 27 17 a a DT work_kv3srcrerrazfgb2arzc4pde5q 27 18 universal universal JJ work_kv3srcrerrazfgb2arzc4pde5q 27 19 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 27 20 attenuators attenuator NNS work_kv3srcrerrazfgb2arzc4pde5q 27 21 or or CC work_kv3srcrerrazfgb2arzc4pde5q 27 22 programed programed JJ work_kv3srcrerrazfgb2arzc4pde5q 27 23 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 27 24 frameshift frameshift NN work_kv3srcrerrazfgb2arzc4pde5q 27 25 signals signal NNS work_kv3srcrerrazfgb2arzc4pde5q 27 26 . . . work_kv3srcrerrazfgb2arzc4pde5q 28 1 Intrinsically intrinsically RB work_kv3srcrerrazfgb2arzc4pde5q 28 2 this this DT work_kv3srcrerrazfgb2arzc4pde5q 28 3 novel novel NN work_kv3srcrerrazfgb2arzc4pde5q 28 4 RNA RNA NNP work_kv3srcrerrazfgb2arzc4pde5q 28 5 motif motif NN work_kv3srcrerrazfgb2arzc4pde5q 28 6 plays play VBZ work_kv3srcrerrazfgb2arzc4pde5q 28 7 an an DT work_kv3srcrerrazfgb2arzc4pde5q 28 8 important important JJ work_kv3srcrerrazfgb2arzc4pde5q 28 9 role role NN work_kv3srcrerrazfgb2arzc4pde5q 28 10 in in IN work_kv3srcrerrazfgb2arzc4pde5q 28 11 balancing balance VBG work_kv3srcrerrazfgb2arzc4pde5q 28 12 gene gene NN work_kv3srcrerrazfgb2arzc4pde5q 28 13 dosage dosage NN work_kv3srcrerrazfgb2arzc4pde5q 28 14 and and CC work_kv3srcrerrazfgb2arzc4pde5q 28 15 homeostasis homeostasis NN work_kv3srcrerrazfgb2arzc4pde5q 28 16 of of IN work_kv3srcrerrazfgb2arzc4pde5q 28 17 cellular cellular JJ work_kv3srcrerrazfgb2arzc4pde5q 28 18 environment environment NN work_kv3srcrerrazfgb2arzc4pde5q 28 19 . . . work_kv3srcrerrazfgb2arzc4pde5q 29 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 29 2 level level NN work_kv3srcrerrazfgb2arzc4pde5q 29 3 of of IN work_kv3srcrerrazfgb2arzc4pde5q 29 4 attenuation attenuation NN work_kv3srcrerrazfgb2arzc4pde5q 29 5 , , , work_kv3srcrerrazfgb2arzc4pde5q 29 6 frameshifting frameshifting NN work_kv3srcrerrazfgb2arzc4pde5q 29 7 and and CC work_kv3srcrerrazfgb2arzc4pde5q 29 8 exact exact JJ work_kv3srcrerrazfgb2arzc4pde5q 29 9 role role NN work_kv3srcrerrazfgb2arzc4pde5q 29 10 of of IN work_kv3srcrerrazfgb2arzc4pde5q 29 11 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 29 12 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 29 13 in in IN work_kv3srcrerrazfgb2arzc4pde5q 29 14 organisms organism NNS work_kv3srcrerrazfgb2arzc4pde5q 29 15 homeostasis homeostasis NN work_kv3srcrerrazfgb2arzc4pde5q 29 16 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 29 17 still still RB work_kv3srcrerrazfgb2arzc4pde5q 29 18 to to TO work_kv3srcrerrazfgb2arzc4pde5q 29 19 be be VB work_kv3srcrerrazfgb2arzc4pde5q 29 20 elucidated elucidate VBN work_kv3srcrerrazfgb2arzc4pde5q 29 21 . . . work_kv3srcrerrazfgb2arzc4pde5q 30 1 PATACSDB PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 30 2 server server NN work_kv3srcrerrazfgb2arzc4pde5q 30 3 While while IN work_kv3srcrerrazfgb2arzc4pde5q 30 4 there there EX work_kv3srcrerrazfgb2arzc4pde5q 30 5 are be VBP work_kv3srcrerrazfgb2arzc4pde5q 30 6 several several JJ work_kv3srcrerrazfgb2arzc4pde5q 30 7 resources resource NNS work_kv3srcrerrazfgb2arzc4pde5q 30 8 devoted devote VBN work_kv3srcrerrazfgb2arzc4pde5q 30 9 to to IN work_kv3srcrerrazfgb2arzc4pde5q 30 10 polyadenylation polyadenylation NN work_kv3srcrerrazfgb2arzc4pde5q 30 11 signals signal NNS work_kv3srcrerrazfgb2arzc4pde5q 30 12 in in IN work_kv3srcrerrazfgb2arzc4pde5q 30 13 genomic genomic JJ work_kv3srcrerrazfgb2arzc4pde5q 30 14 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 30 15 , , , work_kv3srcrerrazfgb2arzc4pde5q 30 16 these these DT work_kv3srcrerrazfgb2arzc4pde5q 30 17 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 30 18 different different JJ work_kv3srcrerrazfgb2arzc4pde5q 30 19 sequence sequence NN work_kv3srcrerrazfgb2arzc4pde5q 30 20 signature signature NN work_kv3srcrerrazfgb2arzc4pde5q 30 21 and and CC work_kv3srcrerrazfgb2arzc4pde5q 30 22 refer refer VB work_kv3srcrerrazfgb2arzc4pde5q 30 23 to to IN work_kv3srcrerrazfgb2arzc4pde5q 30 24 the the DT work_kv3srcrerrazfgb2arzc4pde5q 30 25 processing processing NN work_kv3srcrerrazfgb2arzc4pde5q 30 26 of of IN work_kv3srcrerrazfgb2arzc4pde5q 30 27 mRNA mRNA NNS work_kv3srcrerrazfgb2arzc4pde5q 30 28 , , , work_kv3srcrerrazfgb2arzc4pde5q 30 29 not not RB work_kv3srcrerrazfgb2arzc4pde5q 30 30 translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 30 31 . . . work_kv3srcrerrazfgb2arzc4pde5q 31 1 No no DT work_kv3srcrerrazfgb2arzc4pde5q 31 2 genomic genomic JJ work_kv3srcrerrazfgb2arzc4pde5q 31 3 database database NN work_kv3srcrerrazfgb2arzc4pde5q 31 4 reports report VBZ work_kv3srcrerrazfgb2arzc4pde5q 31 5 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 31 6 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 31 7 in in IN work_kv3srcrerrazfgb2arzc4pde5q 31 8 coding code VBG work_kv3srcrerrazfgb2arzc4pde5q 31 9 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 31 10 , , , work_kv3srcrerrazfgb2arzc4pde5q 31 11 therefore therefore RB work_kv3srcrerrazfgb2arzc4pde5q 31 12 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 31 13 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 31 14 designed design VBN work_kv3srcrerrazfgb2arzc4pde5q 31 15 PATACSDB PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 31 16 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 31 17 PolyA PolyA NNP work_kv3srcrerrazfgb2arzc4pde5q 31 18 Translational Translational NNP work_kv3srcrerrazfgb2arzc4pde5q 31 19 Attenuators Attenuators NNPS work_kv3srcrerrazfgb2arzc4pde5q 31 20 in in IN work_kv3srcrerrazfgb2arzc4pde5q 31 21 Coding Coding NNP work_kv3srcrerrazfgb2arzc4pde5q 31 22 Sequences Sequences NNPS work_kv3srcrerrazfgb2arzc4pde5q 31 23 DataBase DataBase NNP work_kv3srcrerrazfgb2arzc4pde5q 31 24 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 31 25 , , , work_kv3srcrerrazfgb2arzc4pde5q 31 26 a a DT work_kv3srcrerrazfgb2arzc4pde5q 31 27 resource resource NN work_kv3srcrerrazfgb2arzc4pde5q 31 28 devoted devote VBN work_kv3srcrerrazfgb2arzc4pde5q 31 29 to to IN work_kv3srcrerrazfgb2arzc4pde5q 31 30 collection collection NN work_kv3srcrerrazfgb2arzc4pde5q 31 31 of of IN work_kv3srcrerrazfgb2arzc4pde5q 31 32 such such JJ work_kv3srcrerrazfgb2arzc4pde5q 31 33 features feature NNS work_kv3srcrerrazfgb2arzc4pde5q 31 34 among among IN work_kv3srcrerrazfgb2arzc4pde5q 31 35 eukaryotic eukaryotic JJ work_kv3srcrerrazfgb2arzc4pde5q 31 36 organisms organism NNS work_kv3srcrerrazfgb2arzc4pde5q 31 37 . . . work_kv3srcrerrazfgb2arzc4pde5q 32 1 In in IN work_kv3srcrerrazfgb2arzc4pde5q 32 2 concordance concordance NN work_kv3srcrerrazfgb2arzc4pde5q 32 3 with with IN work_kv3srcrerrazfgb2arzc4pde5q 32 4 our -PRON- PRP$ work_kv3srcrerrazfgb2arzc4pde5q 32 5 experimental experimental JJ work_kv3srcrerrazfgb2arzc4pde5q 32 6 data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 32 7 from from IN work_kv3srcrerrazfgb2arzc4pde5q 32 8 the the DT work_kv3srcrerrazfgb2arzc4pde5q 32 9 controlled control VBN work_kv3srcrerrazfgb2arzc4pde5q 32 10 expression expression NN work_kv3srcrerrazfgb2arzc4pde5q 32 11 of of IN work_kv3srcrerrazfgb2arzc4pde5q 32 12 reporter reporter NN work_kv3srcrerrazfgb2arzc4pde5q 32 13 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 32 14 or or CC work_kv3srcrerrazfgb2arzc4pde5q 32 15 natural natural JJ work_kv3srcrerrazfgb2arzc4pde5q 32 16 gene gene NN work_kv3srcrerrazfgb2arzc4pde5q 32 17 expression expression NN work_kv3srcrerrazfgb2arzc4pde5q 32 18 profiles profile NNS work_kv3srcrerrazfgb2arzc4pde5q 32 19 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 32 20 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 32 21 designed design VBN work_kv3srcrerrazfgb2arzc4pde5q 32 22 a a DT work_kv3srcrerrazfgb2arzc4pde5q 32 23 12A-1 12a-1 CD work_kv3srcrerrazfgb2arzc4pde5q 32 24 pattern pattern NN work_kv3srcrerrazfgb2arzc4pde5q 32 25 , , , work_kv3srcrerrazfgb2arzc4pde5q 32 26 that that WDT work_kv3srcrerrazfgb2arzc4pde5q 32 27 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 32 28 pattern pattern NN work_kv3srcrerrazfgb2arzc4pde5q 32 29 of of IN work_kv3srcrerrazfgb2arzc4pde5q 32 30 twelve twelve CD work_kv3srcrerrazfgb2arzc4pde5q 32 31 adenines adenine NNS work_kv3srcrerrazfgb2arzc4pde5q 32 32 in in IN work_kv3srcrerrazfgb2arzc4pde5q 32 33 coding code VBG work_kv3srcrerrazfgb2arzc4pde5q 32 34 region region NN work_kv3srcrerrazfgb2arzc4pde5q 32 35 allowing allow VBG work_kv3srcrerrazfgb2arzc4pde5q 32 36 for for IN work_kv3srcrerrazfgb2arzc4pde5q 32 37 one one CD work_kv3srcrerrazfgb2arzc4pde5q 32 38 mismatch mismatch NN work_kv3srcrerrazfgb2arzc4pde5q 32 39 . . . work_kv3srcrerrazfgb2arzc4pde5q 33 1 Based base VBN work_kv3srcrerrazfgb2arzc4pde5q 33 2 on on IN work_kv3srcrerrazfgb2arzc4pde5q 33 3 our -PRON- PRP$ work_kv3srcrerrazfgb2arzc4pde5q 33 4 experiments experiment NNS work_kv3srcrerrazfgb2arzc4pde5q 33 5 , , , work_kv3srcrerrazfgb2arzc4pde5q 33 6 this this DT work_kv3srcrerrazfgb2arzc4pde5q 33 7 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 33 8 a a DT work_kv3srcrerrazfgb2arzc4pde5q 33 9 minimal minimal JJ work_kv3srcrerrazfgb2arzc4pde5q 33 10 pattern pattern NN work_kv3srcrerrazfgb2arzc4pde5q 33 11 that that WDT work_kv3srcrerrazfgb2arzc4pde5q 33 12 should should MD work_kv3srcrerrazfgb2arzc4pde5q 33 13 result result VB work_kv3srcrerrazfgb2arzc4pde5q 33 14 in in IN work_kv3srcrerrazfgb2arzc4pde5q 33 15 reduction reduction NN work_kv3srcrerrazfgb2arzc4pde5q 33 16 of of IN work_kv3srcrerrazfgb2arzc4pde5q 33 17 expression expression NN work_kv3srcrerrazfgb2arzc4pde5q 33 18 by by IN work_kv3srcrerrazfgb2arzc4pde5q 33 19 roughly roughly RB work_kv3srcrerrazfgb2arzc4pde5q 33 20 30 30 CD work_kv3srcrerrazfgb2arzc4pde5q 33 21 % % NN work_kv3srcrerrazfgb2arzc4pde5q 33 22 , , , work_kv3srcrerrazfgb2arzc4pde5q 33 23 a a DT work_kv3srcrerrazfgb2arzc4pde5q 33 24 magnitude magnitude NN work_kv3srcrerrazfgb2arzc4pde5q 33 25 that that WDT work_kv3srcrerrazfgb2arzc4pde5q 33 26 can can MD work_kv3srcrerrazfgb2arzc4pde5q 33 27 potentially potentially RB work_kv3srcrerrazfgb2arzc4pde5q 33 28 have have VB work_kv3srcrerrazfgb2arzc4pde5q 33 29 a a DT work_kv3srcrerrazfgb2arzc4pde5q 33 30 measurable measurable JJ work_kv3srcrerrazfgb2arzc4pde5q 33 31 biological biological JJ work_kv3srcrerrazfgb2arzc4pde5q 33 32 impact impact NN work_kv3srcrerrazfgb2arzc4pde5q 33 33 in in IN work_kv3srcrerrazfgb2arzc4pde5q 33 34 human human JJ work_kv3srcrerrazfgb2arzc4pde5q 33 35 cells cell NNS work_kv3srcrerrazfgb2arzc4pde5q 33 36 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 33 37 Arthur Arthur NNP work_kv3srcrerrazfgb2arzc4pde5q 33 38 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 33 39 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 33 40 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 33 41 , , , work_kv3srcrerrazfgb2arzc4pde5q 33 42 2015 2015 CD work_kv3srcrerrazfgb2arzc4pde5q 33 43 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 33 44 . . . work_kv3srcrerrazfgb2arzc4pde5q 34 1 We -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 34 2 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 34 3 extrapolated extrapolate VBN work_kv3srcrerrazfgb2arzc4pde5q 34 4 this this DT work_kv3srcrerrazfgb2arzc4pde5q 34 5 pattern pattern NN work_kv3srcrerrazfgb2arzc4pde5q 34 6 to to IN work_kv3srcrerrazfgb2arzc4pde5q 34 7 other other JJ work_kv3srcrerrazfgb2arzc4pde5q 34 8 organisms organism NNS work_kv3srcrerrazfgb2arzc4pde5q 34 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 34 10 Habich Habich NNP work_kv3srcrerrazfgb2arzc4pde5q 34 11 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 34 12 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 34 13 . . . work_kv3srcrerrazfgb2arzc4pde5q 35 1 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 35 2 2016 2016 CD work_kv3srcrerrazfgb2arzc4pde5q 35 3 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 35 4 , , , work_kv3srcrerrazfgb2arzc4pde5q 35 5 PeerJ PeerJ NNP work_kv3srcrerrazfgb2arzc4pde5q 35 6 Comput Comput NNP work_kv3srcrerrazfgb2arzc4pde5q 35 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 36 1 Sci Sci NNP work_kv3srcrerrazfgb2arzc4pde5q 36 2 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 36 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 36 4 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 36 5 10.7717 10.7717 CD work_kv3srcrerrazfgb2arzc4pde5q 36 6 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 36 7 peerj peerj NNP work_kv3srcrerrazfgb2arzc4pde5q 36 8 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 36 9 cs.45 cs.45 NNP work_kv3srcrerrazfgb2arzc4pde5q 36 10 2/7 2/7 CD work_kv3srcrerrazfgb2arzc4pde5q 36 11 https://peerj.com/computer-science/ https://peerj.com/computer-science/ CD work_kv3srcrerrazfgb2arzc4pde5q 36 12 http://dx.doi.org/10.7717/peerj-cs.45 http://dx.doi.org/10.7717/peerj-cs.45 NNP work_kv3srcrerrazfgb2arzc4pde5q 36 13 Table table NN work_kv3srcrerrazfgb2arzc4pde5q 36 14 1 1 CD work_kv3srcrerrazfgb2arzc4pde5q 36 15 Summary Summary NNP work_kv3srcrerrazfgb2arzc4pde5q 36 16 of of IN work_kv3srcrerrazfgb2arzc4pde5q 36 17 the the DT work_kv3srcrerrazfgb2arzc4pde5q 36 18 content content NN work_kv3srcrerrazfgb2arzc4pde5q 36 19 of of IN work_kv3srcrerrazfgb2arzc4pde5q 36 20 PATACSDB PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 36 21 . . . work_kv3srcrerrazfgb2arzc4pde5q 37 1 Feature feature NN work_kv3srcrerrazfgb2arzc4pde5q 37 2 Value value NN work_kv3srcrerrazfgb2arzc4pde5q 37 3 Total total JJ work_kv3srcrerrazfgb2arzc4pde5q 37 4 number number NN work_kv3srcrerrazfgb2arzc4pde5q 37 5 of of IN work_kv3srcrerrazfgb2arzc4pde5q 37 6 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 37 7 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 37 8 carrying carry VBG work_kv3srcrerrazfgb2arzc4pde5q 37 9 transcripts transcript NNS work_kv3srcrerrazfgb2arzc4pde5q 37 10 197,964 197,964 CD work_kv3srcrerrazfgb2arzc4pde5q 37 11 Highest high JJS work_kv3srcrerrazfgb2arzc4pde5q 37 12 percentage percentage NN work_kv3srcrerrazfgb2arzc4pde5q 37 13 of of IN work_kv3srcrerrazfgb2arzc4pde5q 37 14 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 37 15 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 37 16 carrying carry VBG work_kv3srcrerrazfgb2arzc4pde5q 37 17 transcripts transcript NNS work_kv3srcrerrazfgb2arzc4pde5q 37 18 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 19 first first RB work_kv3srcrerrazfgb2arzc4pde5q 37 20 5 5 CD work_kv3srcrerrazfgb2arzc4pde5q 37 21 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 22 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 23 berghei berghei VBD work_kv3srcrerrazfgb2arzc4pde5q 37 24 68.259 68.259 CD work_kv3srcrerrazfgb2arzc4pde5q 37 25 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 26 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 27 yoelii yoelii NN work_kv3srcrerrazfgb2arzc4pde5q 37 28 17× 17× CD work_kv3srcrerrazfgb2arzc4pde5q 37 29 64.957 64.957 CD work_kv3srcrerrazfgb2arzc4pde5q 37 30 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 31 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 32 falciparum falciparum NN work_kv3srcrerrazfgb2arzc4pde5q 37 33 63.539 63.539 CD work_kv3srcrerrazfgb2arzc4pde5q 37 34 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 35 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 36 chabaudi chabaudi NN work_kv3srcrerrazfgb2arzc4pde5q 37 37 63.372 63.372 CD work_kv3srcrerrazfgb2arzc4pde5q 37 38 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 39 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 40 reichenowi reichenowi NN work_kv3srcrerrazfgb2arzc4pde5q 37 41 62.933 62.933 CD work_kv3srcrerrazfgb2arzc4pde5q 37 42 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 43 Lowest low JJS work_kv3srcrerrazfgb2arzc4pde5q 37 44 percentage percentage NN work_kv3srcrerrazfgb2arzc4pde5q 37 45 of of IN work_kv3srcrerrazfgb2arzc4pde5q 37 46 polyA polya NN work_kv3srcrerrazfgb2arzc4pde5q 37 47 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 37 48 carrying carry VBG work_kv3srcrerrazfgb2arzc4pde5q 37 49 transcripts transcript NNS work_kv3srcrerrazfgb2arzc4pde5q 37 50 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 51 first first RB work_kv3srcrerrazfgb2arzc4pde5q 37 52 5 5 CD work_kv3srcrerrazfgb2arzc4pde5q 37 53 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 54 Pythium pythium NN work_kv3srcrerrazfgb2arzc4pde5q 37 55 vexans vexan NNS work_kv3srcrerrazfgb2arzc4pde5q 37 56 0.025 0.025 CD work_kv3srcrerrazfgb2arzc4pde5q 37 57 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 58 Saprolegnia Saprolegnia NNP work_kv3srcrerrazfgb2arzc4pde5q 37 59 diclina diclina NN work_kv3srcrerrazfgb2arzc4pde5q 37 60 vs. vs. CC work_kv3srcrerrazfgb2arzc4pde5q 37 61 20 20 CD work_kv3srcrerrazfgb2arzc4pde5q 37 62 0.038 0.038 CD work_kv3srcrerrazfgb2arzc4pde5q 37 63 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 64 Leishmania Leishmania NNP work_kv3srcrerrazfgb2arzc4pde5q 37 65 major major JJ work_kv3srcrerrazfgb2arzc4pde5q 37 66 0.048 0.048 CD work_kv3srcrerrazfgb2arzc4pde5q 37 67 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 68 Phytophthora Phytophthora NNP work_kv3srcrerrazfgb2arzc4pde5q 37 69 sojae sojae NN work_kv3srcrerrazfgb2arzc4pde5q 37 70 0.058 0.058 CD work_kv3srcrerrazfgb2arzc4pde5q 37 71 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 72 Salpingoeca Salpingoeca NNP work_kv3srcrerrazfgb2arzc4pde5q 37 73 rosetta rosetta NN work_kv3srcrerrazfgb2arzc4pde5q 37 74 0.060 0.060 CD work_kv3srcrerrazfgb2arzc4pde5q 37 75 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 76 Median median JJ work_kv3srcrerrazfgb2arzc4pde5q 37 77 and and CC work_kv3srcrerrazfgb2arzc4pde5q 37 78 average average JJ work_kv3srcrerrazfgb2arzc4pde5q 37 79 percentage percentage NN work_kv3srcrerrazfgb2arzc4pde5q 37 80 of of IN work_kv3srcrerrazfgb2arzc4pde5q 37 81 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 37 82 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 37 83 carrying carry VBG work_kv3srcrerrazfgb2arzc4pde5q 37 84 transcripts transcript NNS work_kv3srcrerrazfgb2arzc4pde5q 37 85 2.0 2.0 CD work_kv3srcrerrazfgb2arzc4pde5q 37 86 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 87 and and CC work_kv3srcrerrazfgb2arzc4pde5q 37 88 7.6 7.6 CD work_kv3srcrerrazfgb2arzc4pde5q 37 89 % % NN work_kv3srcrerrazfgb2arzc4pde5q 37 90 respectively respectively RB work_kv3srcrerrazfgb2arzc4pde5q 37 91 The the DT work_kv3srcrerrazfgb2arzc4pde5q 37 92 longest long JJS work_kv3srcrerrazfgb2arzc4pde5q 37 93 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 37 94 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 37 95 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 96 first first RB work_kv3srcrerrazfgb2arzc4pde5q 37 97 10 10 CD work_kv3srcrerrazfgb2arzc4pde5q 37 98 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 99 132 132 CD work_kv3srcrerrazfgb2arzc4pde5q 37 100 nt nt RB work_kv3srcrerrazfgb2arzc4pde5q 37 101 — — : work_kv3srcrerrazfgb2arzc4pde5q 37 102 CDO62875 CDO62875 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 103 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 104 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 105 reichenowi reichenowi NN work_kv3srcrerrazfgb2arzc4pde5q 37 106 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 107 131 131 CD work_kv3srcrerrazfgb2arzc4pde5q 37 108 nt nt RB work_kv3srcrerrazfgb2arzc4pde5q 37 109 — — : work_kv3srcrerrazfgb2arzc4pde5q 37 110 CDO63348 CDO63348 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 111 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 112 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 113 reichenowi reichenowi NN work_kv3srcrerrazfgb2arzc4pde5q 37 114 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 115 111 111 CD work_kv3srcrerrazfgb2arzc4pde5q 37 116 nt nt RB work_kv3srcrerrazfgb2arzc4pde5q 37 117 — — : work_kv3srcrerrazfgb2arzc4pde5q 37 118 ETW31025 ETW31025 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 119 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 120 Plasmodium plasmodium NN work_kv3srcrerrazfgb2arzc4pde5q 37 121 falciparum falciparum NN work_kv3srcrerrazfgb2arzc4pde5q 37 122 fch fch CC work_kv3srcrerrazfgb2arzc4pde5q 37 123 4 4 CD work_kv3srcrerrazfgb2arzc4pde5q 37 124 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 125 109 109 CD work_kv3srcrerrazfgb2arzc4pde5q 37 126 nt nt RB work_kv3srcrerrazfgb2arzc4pde5q 37 127 — — : work_kv3srcrerrazfgb2arzc4pde5q 37 128 ETW57402 ETW57402 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 129 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 130 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 131 falciparum falciparum NNP work_kv3srcrerrazfgb2arzc4pde5q 37 132 palo palo NNP work_kv3srcrerrazfgb2arzc4pde5q 37 133 alto alto NNP work_kv3srcrerrazfgb2arzc4pde5q 37 134 uganda uganda NNP work_kv3srcrerrazfgb2arzc4pde5q 37 135 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 136 107 107 CD work_kv3srcrerrazfgb2arzc4pde5q 37 137 nt nt RB work_kv3srcrerrazfgb2arzc4pde5q 37 138 — — : work_kv3srcrerrazfgb2arzc4pde5q 37 139 ETW41820 ETW41820 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 140 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 141 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 142 falciparum falciparum NN work_kv3srcrerrazfgb2arzc4pde5q 37 143 nf135 nf135 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 144 5 5 CD work_kv3srcrerrazfgb2arzc4pde5q 37 145 c10 c10 NN work_kv3srcrerrazfgb2arzc4pde5q 37 146 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 147 107 107 CD work_kv3srcrerrazfgb2arzc4pde5q 37 148 nt nt RB work_kv3srcrerrazfgb2arzc4pde5q 37 149 — — : work_kv3srcrerrazfgb2arzc4pde5q 37 150 ETW15539 ETW15539 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 151 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 152 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 153 falciparum falciparum NNP work_kv3srcrerrazfgb2arzc4pde5q 37 154 vietnam vietnam NNP work_kv3srcrerrazfgb2arzc4pde5q 37 155 oak oak NNP work_kv3srcrerrazfgb2arzc4pde5q 37 156 knoll knoll NNP work_kv3srcrerrazfgb2arzc4pde5q 37 157 fvo fvo NNP work_kv3srcrerrazfgb2arzc4pde5q 37 158 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 159 97 97 CD work_kv3srcrerrazfgb2arzc4pde5q 37 160 nt nt RB work_kv3srcrerrazfgb2arzc4pde5q 37 161 — — : work_kv3srcrerrazfgb2arzc4pde5q 37 162 CDO66404 CDO66404 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 163 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 164 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 165 reichenowi reichenowi NN work_kv3srcrerrazfgb2arzc4pde5q 37 166 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 167 95 95 CD work_kv3srcrerrazfgb2arzc4pde5q 37 168 nt nt RB work_kv3srcrerrazfgb2arzc4pde5q 37 169 — — : work_kv3srcrerrazfgb2arzc4pde5q 37 170 EUT78604 EUT78604 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 171 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 172 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 173 falciparum falciparum NN work_kv3srcrerrazfgb2arzc4pde5q 37 174 santa santa NNP work_kv3srcrerrazfgb2arzc4pde5q 37 175 lucia lucia NNP work_kv3srcrerrazfgb2arzc4pde5q 37 176 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 177 89 89 CD work_kv3srcrerrazfgb2arzc4pde5q 37 178 nt nt RB work_kv3srcrerrazfgb2arzc4pde5q 37 179 — — : work_kv3srcrerrazfgb2arzc4pde5q 37 180 ETW44841 ETW44841 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 181 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 182 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 183 falciparum falciparum NN work_kv3srcrerrazfgb2arzc4pde5q 37 184 nf135 nf135 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 185 5 5 CD work_kv3srcrerrazfgb2arzc4pde5q 37 186 c10 c10 NN work_kv3srcrerrazfgb2arzc4pde5q 37 187 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 188 88 88 CD work_kv3srcrerrazfgb2arzc4pde5q 37 189 nt nt RB work_kv3srcrerrazfgb2arzc4pde5q 37 190 — — : work_kv3srcrerrazfgb2arzc4pde5q 37 191 ETW48723 ETW48723 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 192 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 37 193 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 37 194 falciparum falciparum NN work_kv3srcrerrazfgb2arzc4pde5q 37 195 malips096 malips096 NNP work_kv3srcrerrazfgb2arzc4pde5q 37 196 e11 e11 NN work_kv3srcrerrazfgb2arzc4pde5q 37 197 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 37 198 because because IN work_kv3srcrerrazfgb2arzc4pde5q 37 199 without without IN work_kv3srcrerrazfgb2arzc4pde5q 37 200 further further JJ work_kv3srcrerrazfgb2arzc4pde5q 37 201 experimental experimental JJ work_kv3srcrerrazfgb2arzc4pde5q 37 202 work work NN work_kv3srcrerrazfgb2arzc4pde5q 37 203 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 37 204 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 37 205 no no DT work_kv3srcrerrazfgb2arzc4pde5q 37 206 way way NN work_kv3srcrerrazfgb2arzc4pde5q 37 207 to to TO work_kv3srcrerrazfgb2arzc4pde5q 37 208 define define VB work_kv3srcrerrazfgb2arzc4pde5q 37 209 the the DT work_kv3srcrerrazfgb2arzc4pde5q 37 210 minimal minimal JJ work_kv3srcrerrazfgb2arzc4pde5q 37 211 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 37 212 pattern pattern NN work_kv3srcrerrazfgb2arzc4pde5q 37 213 in in IN work_kv3srcrerrazfgb2arzc4pde5q 37 214 other other JJ work_kv3srcrerrazfgb2arzc4pde5q 37 215 organisms organism NNS work_kv3srcrerrazfgb2arzc4pde5q 37 216 . . . work_kv3srcrerrazfgb2arzc4pde5q 38 1 We -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 38 2 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 38 3 analyzed analyze VBN work_kv3srcrerrazfgb2arzc4pde5q 38 4 eukaryotic eukaryotic JJ work_kv3srcrerrazfgb2arzc4pde5q 38 5 Ensembl Ensembl NNP work_kv3srcrerrazfgb2arzc4pde5q 38 6 genomes genome NNS work_kv3srcrerrazfgb2arzc4pde5q 38 7 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 38 8 Flicek Flicek NNP work_kv3srcrerrazfgb2arzc4pde5q 38 9 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 38 10 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 38 11 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 38 12 , , , work_kv3srcrerrazfgb2arzc4pde5q 38 13 2014 2014 CD work_kv3srcrerrazfgb2arzc4pde5q 38 14 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 38 15 for for IN work_kv3srcrerrazfgb2arzc4pde5q 38 16 the the DT work_kv3srcrerrazfgb2arzc4pde5q 38 17 presence presence NN work_kv3srcrerrazfgb2arzc4pde5q 38 18 of of IN work_kv3srcrerrazfgb2arzc4pde5q 38 19 this this DT work_kv3srcrerrazfgb2arzc4pde5q 38 20 pattern pattern NN work_kv3srcrerrazfgb2arzc4pde5q 38 21 in in IN work_kv3srcrerrazfgb2arzc4pde5q 38 22 coding code VBG work_kv3srcrerrazfgb2arzc4pde5q 38 23 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 38 24 , , , work_kv3srcrerrazfgb2arzc4pde5q 38 25 using use VBG work_kv3srcrerrazfgb2arzc4pde5q 38 26 only only RB work_kv3srcrerrazfgb2arzc4pde5q 38 27 these these DT work_kv3srcrerrazfgb2arzc4pde5q 38 28 entries entry NNS work_kv3srcrerrazfgb2arzc4pde5q 38 29 for for IN work_kv3srcrerrazfgb2arzc4pde5q 38 30 which which WDT work_kv3srcrerrazfgb2arzc4pde5q 38 31 coding code VBG work_kv3srcrerrazfgb2arzc4pde5q 38 32 sequence sequence NN work_kv3srcrerrazfgb2arzc4pde5q 38 33 matched match VBD work_kv3srcrerrazfgb2arzc4pde5q 38 34 reported report VBN work_kv3srcrerrazfgb2arzc4pde5q 38 35 translated translate VBN work_kv3srcrerrazfgb2arzc4pde5q 38 36 sequence sequence NN work_kv3srcrerrazfgb2arzc4pde5q 38 37 . . . work_kv3srcrerrazfgb2arzc4pde5q 39 1 This this DT work_kv3srcrerrazfgb2arzc4pde5q 39 2 was be VBD work_kv3srcrerrazfgb2arzc4pde5q 39 3 done do VBN work_kv3srcrerrazfgb2arzc4pde5q 39 4 not not RB work_kv3srcrerrazfgb2arzc4pde5q 39 5 only only RB work_kv3srcrerrazfgb2arzc4pde5q 39 6 on on IN work_kv3srcrerrazfgb2arzc4pde5q 39 7 standard standard JJ work_kv3srcrerrazfgb2arzc4pde5q 39 8 Ensembl Ensembl NNP work_kv3srcrerrazfgb2arzc4pde5q 39 9 genomes genome NNS work_kv3srcrerrazfgb2arzc4pde5q 39 10 but but CC work_kv3srcrerrazfgb2arzc4pde5q 39 11 additional additional JJ work_kv3srcrerrazfgb2arzc4pde5q 39 12 eukaryotic eukaryotic JJ work_kv3srcrerrazfgb2arzc4pde5q 39 13 databases database NNS work_kv3srcrerrazfgb2arzc4pde5q 39 14 like like IN work_kv3srcrerrazfgb2arzc4pde5q 39 15 Ensembl Ensembl NNP work_kv3srcrerrazfgb2arzc4pde5q 39 16 Protists Protists NNPS work_kv3srcrerrazfgb2arzc4pde5q 39 17 and and CC work_kv3srcrerrazfgb2arzc4pde5q 39 18 Ensembl Ensembl NNP work_kv3srcrerrazfgb2arzc4pde5q 39 19 Metazoa Metazoa NNP work_kv3srcrerrazfgb2arzc4pde5q 39 20 . . . work_kv3srcrerrazfgb2arzc4pde5q 40 1 As as IN work_kv3srcrerrazfgb2arzc4pde5q 40 2 a a DT work_kv3srcrerrazfgb2arzc4pde5q 40 3 result result NN work_kv3srcrerrazfgb2arzc4pde5q 40 4 , , , work_kv3srcrerrazfgb2arzc4pde5q 40 5 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 40 6 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 40 7 identified identify VBN work_kv3srcrerrazfgb2arzc4pde5q 40 8 197,964 197,964 CD work_kv3srcrerrazfgb2arzc4pde5q 40 9 genes gene NNS work_kv3srcrerrazfgb2arzc4pde5q 40 10 in in IN work_kv3srcrerrazfgb2arzc4pde5q 40 11 254 254 CD work_kv3srcrerrazfgb2arzc4pde5q 40 12 genomes genome NNS work_kv3srcrerrazfgb2arzc4pde5q 40 13 that that WDT work_kv3srcrerrazfgb2arzc4pde5q 40 14 carry carry VBP work_kv3srcrerrazfgb2arzc4pde5q 40 15 446,206 446,206 CD work_kv3srcrerrazfgb2arzc4pde5q 40 16 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 40 17 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 40 18 . . . work_kv3srcrerrazfgb2arzc4pde5q 41 1 PolyA PolyA NNP work_kv3srcrerrazfgb2arzc4pde5q 41 2 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 41 3 across across IN work_kv3srcrerrazfgb2arzc4pde5q 41 4 eukaryotic eukaryotic JJ work_kv3srcrerrazfgb2arzc4pde5q 41 5 organisms organism NNS work_kv3srcrerrazfgb2arzc4pde5q 41 6 In in IN work_kv3srcrerrazfgb2arzc4pde5q 41 7 the the DT work_kv3srcrerrazfgb2arzc4pde5q 41 8 previous previous JJ work_kv3srcrerrazfgb2arzc4pde5q 41 9 studies study NNS work_kv3srcrerrazfgb2arzc4pde5q 41 10 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 41 11 Koutmou Koutmou NNP work_kv3srcrerrazfgb2arzc4pde5q 41 12 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 41 13 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 41 14 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 41 15 , , , work_kv3srcrerrazfgb2arzc4pde5q 41 16 2015 2015 CD work_kv3srcrerrazfgb2arzc4pde5q 41 17 ; ; : work_kv3srcrerrazfgb2arzc4pde5q 41 18 Arthur Arthur NNP work_kv3srcrerrazfgb2arzc4pde5q 41 19 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 41 20 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 41 21 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 41 22 , , , work_kv3srcrerrazfgb2arzc4pde5q 41 23 2015 2015 CD work_kv3srcrerrazfgb2arzc4pde5q 41 24 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 41 25 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 41 26 focused focus VBD work_kv3srcrerrazfgb2arzc4pde5q 41 27 mainly mainly RB work_kv3srcrerrazfgb2arzc4pde5q 41 28 on on IN work_kv3srcrerrazfgb2arzc4pde5q 41 29 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 41 30 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 41 31 from from IN work_kv3srcrerrazfgb2arzc4pde5q 41 32 human human NN work_kv3srcrerrazfgb2arzc4pde5q 41 33 and and CC work_kv3srcrerrazfgb2arzc4pde5q 41 34 yeast yeast NN work_kv3srcrerrazfgb2arzc4pde5q 41 35 genomes genome NNS work_kv3srcrerrazfgb2arzc4pde5q 41 36 , , , work_kv3srcrerrazfgb2arzc4pde5q 41 37 using use VBG work_kv3srcrerrazfgb2arzc4pde5q 41 38 the the DT work_kv3srcrerrazfgb2arzc4pde5q 41 39 NCBI NCBI NNP work_kv3srcrerrazfgb2arzc4pde5q 41 40 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 41 41 Pruitt Pruitt NNP work_kv3srcrerrazfgb2arzc4pde5q 41 42 et et FW work_kv3srcrerrazfgb2arzc4pde5q 41 43 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 41 44 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 41 45 , , , work_kv3srcrerrazfgb2arzc4pde5q 41 46 2014 2014 CD work_kv3srcrerrazfgb2arzc4pde5q 41 47 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 41 48 database database NN work_kv3srcrerrazfgb2arzc4pde5q 41 49 and and CC work_kv3srcrerrazfgb2arzc4pde5q 41 50 SGD SGD NNP work_kv3srcrerrazfgb2arzc4pde5q 41 51 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 41 52 Cherry Cherry NNP work_kv3srcrerrazfgb2arzc4pde5q 41 53 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 41 54 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 41 55 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 41 56 , , , work_kv3srcrerrazfgb2arzc4pde5q 41 57 1998 1998 CD work_kv3srcrerrazfgb2arzc4pde5q 41 58 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 41 59 as as IN work_kv3srcrerrazfgb2arzc4pde5q 41 60 data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 41 61 sources source NNS work_kv3srcrerrazfgb2arzc4pde5q 41 62 , , , work_kv3srcrerrazfgb2arzc4pde5q 41 63 respectively respectively RB work_kv3srcrerrazfgb2arzc4pde5q 41 64 . . . work_kv3srcrerrazfgb2arzc4pde5q 42 1 Overall overall RB work_kv3srcrerrazfgb2arzc4pde5q 42 2 there there EX work_kv3srcrerrazfgb2arzc4pde5q 42 3 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 42 4 a a DT work_kv3srcrerrazfgb2arzc4pde5q 42 5 good good JJ work_kv3srcrerrazfgb2arzc4pde5q 42 6 agreement agreement NN work_kv3srcrerrazfgb2arzc4pde5q 42 7 between between IN work_kv3srcrerrazfgb2arzc4pde5q 42 8 our -PRON- PRP$ work_kv3srcrerrazfgb2arzc4pde5q 42 9 previous previous JJ work_kv3srcrerrazfgb2arzc4pde5q 42 10 analysis analysis NN work_kv3srcrerrazfgb2arzc4pde5q 42 11 and and CC work_kv3srcrerrazfgb2arzc4pde5q 42 12 this this DT work_kv3srcrerrazfgb2arzc4pde5q 42 13 study study NN work_kv3srcrerrazfgb2arzc4pde5q 42 14 for for IN work_kv3srcrerrazfgb2arzc4pde5q 42 15 high high JJ work_kv3srcrerrazfgb2arzc4pde5q 42 16 eukaryotes eukaryote NNS work_kv3srcrerrazfgb2arzc4pde5q 42 17 , , , work_kv3srcrerrazfgb2arzc4pde5q 42 18 while while IN work_kv3srcrerrazfgb2arzc4pde5q 42 19 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 42 20 see see VBP work_kv3srcrerrazfgb2arzc4pde5q 42 21 some some DT work_kv3srcrerrazfgb2arzc4pde5q 42 22 discrepancies discrepancy NNS work_kv3srcrerrazfgb2arzc4pde5q 42 23 for for IN work_kv3srcrerrazfgb2arzc4pde5q 42 24 lower low JJR work_kv3srcrerrazfgb2arzc4pde5q 42 25 eukaryotes eukaryote NNS work_kv3srcrerrazfgb2arzc4pde5q 42 26 such such JJ work_kv3srcrerrazfgb2arzc4pde5q 42 27 as as IN work_kv3srcrerrazfgb2arzc4pde5q 42 28 yeast yeast NN work_kv3srcrerrazfgb2arzc4pde5q 42 29 . . . work_kv3srcrerrazfgb2arzc4pde5q 43 1 For for IN work_kv3srcrerrazfgb2arzc4pde5q 43 2 example example NN work_kv3srcrerrazfgb2arzc4pde5q 43 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 43 4 in in IN work_kv3srcrerrazfgb2arzc4pde5q 43 5 the the DT work_kv3srcrerrazfgb2arzc4pde5q 43 6 previous previous JJ work_kv3srcrerrazfgb2arzc4pde5q 43 7 study study NN work_kv3srcrerrazfgb2arzc4pde5q 43 8 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 43 9 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 43 10 underestimated underestimate VBN work_kv3srcrerrazfgb2arzc4pde5q 43 11 the the DT work_kv3srcrerrazfgb2arzc4pde5q 43 12 number number NN work_kv3srcrerrazfgb2arzc4pde5q 43 13 of of IN work_kv3srcrerrazfgb2arzc4pde5q 43 14 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 43 15 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 43 16 carrying carry VBG work_kv3srcrerrazfgb2arzc4pde5q 43 17 genes gene NNS work_kv3srcrerrazfgb2arzc4pde5q 43 18 in in IN work_kv3srcrerrazfgb2arzc4pde5q 43 19 yeast yeast NN work_kv3srcrerrazfgb2arzc4pde5q 43 20 by by IN work_kv3srcrerrazfgb2arzc4pde5q 43 21 an an DT work_kv3srcrerrazfgb2arzc4pde5q 43 22 order order NN work_kv3srcrerrazfgb2arzc4pde5q 43 23 of of IN work_kv3srcrerrazfgb2arzc4pde5q 43 24 magnitude magnitude NN work_kv3srcrerrazfgb2arzc4pde5q 43 25 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 43 26 29 29 CD work_kv3srcrerrazfgb2arzc4pde5q 43 27 vs. vs. NN work_kv3srcrerrazfgb2arzc4pde5q 43 28 369)—a 369)—a CD work_kv3srcrerrazfgb2arzc4pde5q 43 29 result result NN work_kv3srcrerrazfgb2arzc4pde5q 43 30 of of IN work_kv3srcrerrazfgb2arzc4pde5q 43 31 different different JJ work_kv3srcrerrazfgb2arzc4pde5q 43 32 data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 43 33 source source NN work_kv3srcrerrazfgb2arzc4pde5q 43 34 . . . work_kv3srcrerrazfgb2arzc4pde5q 44 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 44 2 percentage percentage NN work_kv3srcrerrazfgb2arzc4pde5q 44 3 of of IN work_kv3srcrerrazfgb2arzc4pde5q 44 4 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 44 5 carrying carrying NN work_kv3srcrerrazfgb2arzc4pde5q 44 6 transcripts transcript NNS work_kv3srcrerrazfgb2arzc4pde5q 44 7 varies vary VBZ work_kv3srcrerrazfgb2arzc4pde5q 44 8 from from IN work_kv3srcrerrazfgb2arzc4pde5q 44 9 organism organism NN work_kv3srcrerrazfgb2arzc4pde5q 44 10 to to IN work_kv3srcrerrazfgb2arzc4pde5q 44 11 organism organism NN work_kv3srcrerrazfgb2arzc4pde5q 44 12 and and CC work_kv3srcrerrazfgb2arzc4pde5q 44 13 exceeds exceed VBZ work_kv3srcrerrazfgb2arzc4pde5q 44 14 60 60 CD work_kv3srcrerrazfgb2arzc4pde5q 44 15 % % NN work_kv3srcrerrazfgb2arzc4pde5q 44 16 for for IN work_kv3srcrerrazfgb2arzc4pde5q 44 17 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 44 18 species specie NNS work_kv3srcrerrazfgb2arzc4pde5q 44 19 , , , work_kv3srcrerrazfgb2arzc4pde5q 44 20 well well RB work_kv3srcrerrazfgb2arzc4pde5q 44 21 known know VBN work_kv3srcrerrazfgb2arzc4pde5q 44 22 for for IN work_kv3srcrerrazfgb2arzc4pde5q 44 23 their -PRON- PRP$ work_kv3srcrerrazfgb2arzc4pde5q 44 24 AT AT NNP work_kv3srcrerrazfgb2arzc4pde5q 44 25 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 44 26 rich rich JJ work_kv3srcrerrazfgb2arzc4pde5q 44 27 genome genome NN work_kv3srcrerrazfgb2arzc4pde5q 44 28 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 44 29 see see VB work_kv3srcrerrazfgb2arzc4pde5q 44 30 Table table NN work_kv3srcrerrazfgb2arzc4pde5q 44 31 1 1 CD work_kv3srcrerrazfgb2arzc4pde5q 44 32 for for IN work_kv3srcrerrazfgb2arzc4pde5q 44 33 summary summary NN work_kv3srcrerrazfgb2arzc4pde5q 44 34 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 44 35 . . . work_kv3srcrerrazfgb2arzc4pde5q 45 1 However however RB work_kv3srcrerrazfgb2arzc4pde5q 45 2 , , , work_kv3srcrerrazfgb2arzc4pde5q 45 3 the the DT work_kv3srcrerrazfgb2arzc4pde5q 45 4 distribution distribution NN work_kv3srcrerrazfgb2arzc4pde5q 45 5 of of IN work_kv3srcrerrazfgb2arzc4pde5q 45 6 lengths length NNS work_kv3srcrerrazfgb2arzc4pde5q 45 7 of of IN work_kv3srcrerrazfgb2arzc4pde5q 45 8 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 45 9 tracks track NNS work_kv3srcrerrazfgb2arzc4pde5q 45 10 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 45 11 quite quite RB work_kv3srcrerrazfgb2arzc4pde5q 45 12 similar similar JJ work_kv3srcrerrazfgb2arzc4pde5q 45 13 across across IN work_kv3srcrerrazfgb2arzc4pde5q 45 14 Habich Habich NNP work_kv3srcrerrazfgb2arzc4pde5q 45 15 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 45 16 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 45 17 . . . work_kv3srcrerrazfgb2arzc4pde5q 46 1 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 46 2 2016 2016 CD work_kv3srcrerrazfgb2arzc4pde5q 46 3 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 46 4 , , , work_kv3srcrerrazfgb2arzc4pde5q 46 5 PeerJ PeerJ NNP work_kv3srcrerrazfgb2arzc4pde5q 46 6 Comput Comput NNP work_kv3srcrerrazfgb2arzc4pde5q 46 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 47 1 Sci Sci NNP work_kv3srcrerrazfgb2arzc4pde5q 47 2 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 47 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 47 4 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 47 5 10.7717 10.7717 CD work_kv3srcrerrazfgb2arzc4pde5q 47 6 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 47 7 peerj peerj NNP work_kv3srcrerrazfgb2arzc4pde5q 47 8 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 47 9 cs.45 cs.45 NNP work_kv3srcrerrazfgb2arzc4pde5q 47 10 3/7 3/7 CD work_kv3srcrerrazfgb2arzc4pde5q 47 11 https://peerj.com/computer-science/ https://peerj.com/computer-science/ UH work_kv3srcrerrazfgb2arzc4pde5q 47 12 http://dx.doi.org/10.7717/peerj-cs.45 http://dx.doi.org/10.7717/peerj-cs.45 RB work_kv3srcrerrazfgb2arzc4pde5q 47 13 Figure figure NN work_kv3srcrerrazfgb2arzc4pde5q 47 14 1 1 CD work_kv3srcrerrazfgb2arzc4pde5q 47 15 Distribution distribution NN work_kv3srcrerrazfgb2arzc4pde5q 47 16 of of IN work_kv3srcrerrazfgb2arzc4pde5q 47 17 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 47 18 lengths length NNS work_kv3srcrerrazfgb2arzc4pde5q 47 19 vs. vs. FW work_kv3srcrerrazfgb2arzc4pde5q 47 20 AT at NN work_kv3srcrerrazfgb2arzc4pde5q 47 21 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 47 22 ratio ratio NN work_kv3srcrerrazfgb2arzc4pde5q 47 23 of of IN work_kv3srcrerrazfgb2arzc4pde5q 47 24 analyzed analyze VBN work_kv3srcrerrazfgb2arzc4pde5q 47 25 genomes genome NNS work_kv3srcrerrazfgb2arzc4pde5q 47 26 . . . work_kv3srcrerrazfgb2arzc4pde5q 48 1 Data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 48 2 for for IN work_kv3srcrerrazfgb2arzc4pde5q 48 3 lengths length NNS work_kv3srcrerrazfgb2arzc4pde5q 48 4 of of IN work_kv3srcrerrazfgb2arzc4pde5q 48 5 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 48 6 were be VBD work_kv3srcrerrazfgb2arzc4pde5q 48 7 divided divide VBN work_kv3srcrerrazfgb2arzc4pde5q 48 8 into into IN work_kv3srcrerrazfgb2arzc4pde5q 48 9 16 16 CD work_kv3srcrerrazfgb2arzc4pde5q 48 10 bins bin NNS work_kv3srcrerrazfgb2arzc4pde5q 48 11 distributed distribute VBN work_kv3srcrerrazfgb2arzc4pde5q 48 12 evenly evenly RB work_kv3srcrerrazfgb2arzc4pde5q 48 13 across across IN work_kv3srcrerrazfgb2arzc4pde5q 48 14 spectrum spectrum NN work_kv3srcrerrazfgb2arzc4pde5q 48 15 of of IN work_kv3srcrerrazfgb2arzc4pde5q 48 16 AT AT NNP work_kv3srcrerrazfgb2arzc4pde5q 48 17 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 48 18 richness richness NN work_kv3srcrerrazfgb2arzc4pde5q 48 19 of of IN work_kv3srcrerrazfgb2arzc4pde5q 48 20 analyzed analyze VBN work_kv3srcrerrazfgb2arzc4pde5q 48 21 genomes genome NNS work_kv3srcrerrazfgb2arzc4pde5q 48 22 . . . work_kv3srcrerrazfgb2arzc4pde5q 49 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 49 2 width width NN work_kv3srcrerrazfgb2arzc4pde5q 49 3 of of IN work_kv3srcrerrazfgb2arzc4pde5q 49 4 a a DT work_kv3srcrerrazfgb2arzc4pde5q 49 5 box box NN work_kv3srcrerrazfgb2arzc4pde5q 49 6 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 49 7 proportional proportional JJ work_kv3srcrerrazfgb2arzc4pde5q 49 8 to to IN work_kv3srcrerrazfgb2arzc4pde5q 49 9 the the DT work_kv3srcrerrazfgb2arzc4pde5q 49 10 number number NN work_kv3srcrerrazfgb2arzc4pde5q 49 11 of of IN work_kv3srcrerrazfgb2arzc4pde5q 49 12 observances observance NNS work_kv3srcrerrazfgb2arzc4pde5q 49 13 in in IN work_kv3srcrerrazfgb2arzc4pde5q 49 14 a a DT work_kv3srcrerrazfgb2arzc4pde5q 49 15 particular particular JJ work_kv3srcrerrazfgb2arzc4pde5q 49 16 bin bin NN work_kv3srcrerrazfgb2arzc4pde5q 49 17 . . . work_kv3srcrerrazfgb2arzc4pde5q 50 1 Lines line NNS work_kv3srcrerrazfgb2arzc4pde5q 50 2 denote denote VBP work_kv3srcrerrazfgb2arzc4pde5q 50 3 1.5∗IQR 1.5∗IQR NNP work_kv3srcrerrazfgb2arzc4pde5q 50 4 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 50 5 interquantile interquantile NNP work_kv3srcrerrazfgb2arzc4pde5q 50 6 range range NNP work_kv3srcrerrazfgb2arzc4pde5q 50 7 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 50 8 . . . work_kv3srcrerrazfgb2arzc4pde5q 51 1 Outliers outlier NNS work_kv3srcrerrazfgb2arzc4pde5q 51 2 were be VBD work_kv3srcrerrazfgb2arzc4pde5q 51 3 removed remove VBN work_kv3srcrerrazfgb2arzc4pde5q 51 4 for for IN work_kv3srcrerrazfgb2arzc4pde5q 51 5 clarity clarity NN work_kv3srcrerrazfgb2arzc4pde5q 51 6 . . . work_kv3srcrerrazfgb2arzc4pde5q 52 1 Data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 52 2 start start VBP work_kv3srcrerrazfgb2arzc4pde5q 52 3 at at IN work_kv3srcrerrazfgb2arzc4pde5q 52 4 length length NN work_kv3srcrerrazfgb2arzc4pde5q 52 5 of of IN work_kv3srcrerrazfgb2arzc4pde5q 52 6 12 12 CD work_kv3srcrerrazfgb2arzc4pde5q 52 7 , , , work_kv3srcrerrazfgb2arzc4pde5q 52 8 as as IN work_kv3srcrerrazfgb2arzc4pde5q 52 9 this this DT work_kv3srcrerrazfgb2arzc4pde5q 52 10 was be VBD work_kv3srcrerrazfgb2arzc4pde5q 52 11 the the DT work_kv3srcrerrazfgb2arzc4pde5q 52 12 length length NN work_kv3srcrerrazfgb2arzc4pde5q 52 13 of of IN work_kv3srcrerrazfgb2arzc4pde5q 52 14 the the DT work_kv3srcrerrazfgb2arzc4pde5q 52 15 minimal minimal JJ work_kv3srcrerrazfgb2arzc4pde5q 52 16 pattern pattern NN work_kv3srcrerrazfgb2arzc4pde5q 52 17 used use VBD work_kv3srcrerrazfgb2arzc4pde5q 52 18 . . . work_kv3srcrerrazfgb2arzc4pde5q 53 1 whole whole JJ work_kv3srcrerrazfgb2arzc4pde5q 53 2 observed observed JJ work_kv3srcrerrazfgb2arzc4pde5q 53 3 spectrum spectrum NN work_kv3srcrerrazfgb2arzc4pde5q 53 4 of of IN work_kv3srcrerrazfgb2arzc4pde5q 53 5 AT AT NNP work_kv3srcrerrazfgb2arzc4pde5q 53 6 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 53 7 content content NN work_kv3srcrerrazfgb2arzc4pde5q 53 8 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 53 9 Fig fig NN work_kv3srcrerrazfgb2arzc4pde5q 53 10 . . . work_kv3srcrerrazfgb2arzc4pde5q 54 1 1 1 LS work_kv3srcrerrazfgb2arzc4pde5q 54 2 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 54 3 . . . work_kv3srcrerrazfgb2arzc4pde5q 55 1 It -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 55 2 might may MD work_kv3srcrerrazfgb2arzc4pde5q 55 3 be be VB work_kv3srcrerrazfgb2arzc4pde5q 55 4 that that IN work_kv3srcrerrazfgb2arzc4pde5q 55 5 the the DT work_kv3srcrerrazfgb2arzc4pde5q 55 6 single single JJ work_kv3srcrerrazfgb2arzc4pde5q 55 7 Plasmodium Plasmodium NNP work_kv3srcrerrazfgb2arzc4pde5q 55 8 genus genus NN work_kv3srcrerrazfgb2arzc4pde5q 55 9 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 55 10 skewing skew VBG work_kv3srcrerrazfgb2arzc4pde5q 55 11 the the DT work_kv3srcrerrazfgb2arzc4pde5q 55 12 distribution distribution NN work_kv3srcrerrazfgb2arzc4pde5q 55 13 , , , work_kv3srcrerrazfgb2arzc4pde5q 55 14 as as IN work_kv3srcrerrazfgb2arzc4pde5q 55 15 the the DT work_kv3srcrerrazfgb2arzc4pde5q 55 16 species species NN work_kv3srcrerrazfgb2arzc4pde5q 55 17 distribution distribution NN work_kv3srcrerrazfgb2arzc4pde5q 55 18 of of IN work_kv3srcrerrazfgb2arzc4pde5q 55 19 genomic genomic JJ work_kv3srcrerrazfgb2arzc4pde5q 55 20 databases database NNS work_kv3srcrerrazfgb2arzc4pde5q 55 21 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 55 22 heavily heavily RB work_kv3srcrerrazfgb2arzc4pde5q 55 23 biased biased JJ work_kv3srcrerrazfgb2arzc4pde5q 55 24 . . . work_kv3srcrerrazfgb2arzc4pde5q 56 1 In in IN work_kv3srcrerrazfgb2arzc4pde5q 56 2 humans human NNS work_kv3srcrerrazfgb2arzc4pde5q 56 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 56 4 only only RB work_kv3srcrerrazfgb2arzc4pde5q 56 5 around around IN work_kv3srcrerrazfgb2arzc4pde5q 56 6 1 1 CD work_kv3srcrerrazfgb2arzc4pde5q 56 7 % % NN work_kv3srcrerrazfgb2arzc4pde5q 56 8 of of IN work_kv3srcrerrazfgb2arzc4pde5q 56 9 transcripts transcript NNS work_kv3srcrerrazfgb2arzc4pde5q 56 10 coming come VBG work_kv3srcrerrazfgb2arzc4pde5q 56 11 from from IN work_kv3srcrerrazfgb2arzc4pde5q 56 12 ca ca NN work_kv3srcrerrazfgb2arzc4pde5q 56 13 . . . work_kv3srcrerrazfgb2arzc4pde5q 57 1 2 2 CD work_kv3srcrerrazfgb2arzc4pde5q 57 2 % % NN work_kv3srcrerrazfgb2arzc4pde5q 57 3 of of IN work_kv3srcrerrazfgb2arzc4pde5q 57 4 genes gene NNS work_kv3srcrerrazfgb2arzc4pde5q 57 5 carry carry VBP work_kv3srcrerrazfgb2arzc4pde5q 57 6 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 57 7 track track NN work_kv3srcrerrazfgb2arzc4pde5q 57 8 and and CC work_kv3srcrerrazfgb2arzc4pde5q 57 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 57 10 as as IN work_kv3srcrerrazfgb2arzc4pde5q 57 11 such such JJ work_kv3srcrerrazfgb2arzc4pde5q 57 12 , , , work_kv3srcrerrazfgb2arzc4pde5q 57 13 are be VBP work_kv3srcrerrazfgb2arzc4pde5q 57 14 subjects subject NNS work_kv3srcrerrazfgb2arzc4pde5q 57 15 of of IN work_kv3srcrerrazfgb2arzc4pde5q 57 16 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 57 17 attenuation attenuation NN work_kv3srcrerrazfgb2arzc4pde5q 57 18 . . . work_kv3srcrerrazfgb2arzc4pde5q 58 1 This this DT work_kv3srcrerrazfgb2arzc4pde5q 58 2 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 58 3 close close JJ work_kv3srcrerrazfgb2arzc4pde5q 58 4 to to IN work_kv3srcrerrazfgb2arzc4pde5q 58 5 a a DT work_kv3srcrerrazfgb2arzc4pde5q 58 6 median median NN work_kv3srcrerrazfgb2arzc4pde5q 58 7 across across IN work_kv3srcrerrazfgb2arzc4pde5q 58 8 all all DT work_kv3srcrerrazfgb2arzc4pde5q 58 9 analyzed analyze VBN work_kv3srcrerrazfgb2arzc4pde5q 58 10 genomes genome NNS work_kv3srcrerrazfgb2arzc4pde5q 58 11 . . . work_kv3srcrerrazfgb2arzc4pde5q 59 1 Furthermore furthermore RB work_kv3srcrerrazfgb2arzc4pde5q 59 2 , , , work_kv3srcrerrazfgb2arzc4pde5q 59 3 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 59 4 did do VBD work_kv3srcrerrazfgb2arzc4pde5q 59 5 not not RB work_kv3srcrerrazfgb2arzc4pde5q 59 6 find find VB work_kv3srcrerrazfgb2arzc4pde5q 59 7 any any DT work_kv3srcrerrazfgb2arzc4pde5q 59 8 correlation correlation NN work_kv3srcrerrazfgb2arzc4pde5q 59 9 between between IN work_kv3srcrerrazfgb2arzc4pde5q 59 10 organismal organismal JJ work_kv3srcrerrazfgb2arzc4pde5q 59 11 complexity complexity NN work_kv3srcrerrazfgb2arzc4pde5q 59 12 and and CC work_kv3srcrerrazfgb2arzc4pde5q 59 13 number number NN work_kv3srcrerrazfgb2arzc4pde5q 59 14 of of IN work_kv3srcrerrazfgb2arzc4pde5q 59 15 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 59 16 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 59 17 affected affect VBN work_kv3srcrerrazfgb2arzc4pde5q 59 18 genes gene NNS work_kv3srcrerrazfgb2arzc4pde5q 59 19 . . . work_kv3srcrerrazfgb2arzc4pde5q 60 1 This this DT work_kv3srcrerrazfgb2arzc4pde5q 60 2 might may MD work_kv3srcrerrazfgb2arzc4pde5q 60 3 indicate indicate VB work_kv3srcrerrazfgb2arzc4pde5q 60 4 that that IN work_kv3srcrerrazfgb2arzc4pde5q 60 5 such such PDT work_kv3srcrerrazfgb2arzc4pde5q 60 6 a a DT work_kv3srcrerrazfgb2arzc4pde5q 60 7 feature feature NN work_kv3srcrerrazfgb2arzc4pde5q 60 8 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 60 9 a a DT work_kv3srcrerrazfgb2arzc4pde5q 60 10 constituent constituent NN work_kv3srcrerrazfgb2arzc4pde5q 60 11 element element NN work_kv3srcrerrazfgb2arzc4pde5q 60 12 of of IN work_kv3srcrerrazfgb2arzc4pde5q 60 13 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 60 14 machinery machinery NN work_kv3srcrerrazfgb2arzc4pde5q 60 15 , , , work_kv3srcrerrazfgb2arzc4pde5q 60 16 unrelated unrelated JJ work_kv3srcrerrazfgb2arzc4pde5q 60 17 to to IN work_kv3srcrerrazfgb2arzc4pde5q 60 18 external external JJ work_kv3srcrerrazfgb2arzc4pde5q 60 19 factors factor NNS work_kv3srcrerrazfgb2arzc4pde5q 60 20 and and CC work_kv3srcrerrazfgb2arzc4pde5q 60 21 regulatory regulatory JJ work_kv3srcrerrazfgb2arzc4pde5q 60 22 mechanisms mechanism NNS work_kv3srcrerrazfgb2arzc4pde5q 60 23 . . . work_kv3srcrerrazfgb2arzc4pde5q 61 1 Software software NN work_kv3srcrerrazfgb2arzc4pde5q 61 2 architecture architecture NN work_kv3srcrerrazfgb2arzc4pde5q 61 3 The the DT work_kv3srcrerrazfgb2arzc4pde5q 61 4 main main JJ work_kv3srcrerrazfgb2arzc4pde5q 61 5 table table NN work_kv3srcrerrazfgb2arzc4pde5q 61 6 consists consist VBZ work_kv3srcrerrazfgb2arzc4pde5q 61 7 of of IN work_kv3srcrerrazfgb2arzc4pde5q 61 8 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 61 9 common common JJ work_kv3srcrerrazfgb2arzc4pde5q 61 10 name name NN work_kv3srcrerrazfgb2arzc4pde5q 61 11 , , , work_kv3srcrerrazfgb2arzc4pde5q 61 12 gene gene NN work_kv3srcrerrazfgb2arzc4pde5q 61 13 and and CC work_kv3srcrerrazfgb2arzc4pde5q 61 14 transcripts transcript VBZ work_kv3srcrerrazfgb2arzc4pde5q 61 15 Ensembl Ensembl NNP work_kv3srcrerrazfgb2arzc4pde5q 61 16 ids ids NNP work_kv3srcrerrazfgb2arzc4pde5q 61 17 , , , work_kv3srcrerrazfgb2arzc4pde5q 61 18 location location NN work_kv3srcrerrazfgb2arzc4pde5q 61 19 of of IN work_kv3srcrerrazfgb2arzc4pde5q 61 20 the the DT work_kv3srcrerrazfgb2arzc4pde5q 61 21 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 61 22 track track NN work_kv3srcrerrazfgb2arzc4pde5q 61 23 expressed express VBN work_kv3srcrerrazfgb2arzc4pde5q 61 24 as as IN work_kv3srcrerrazfgb2arzc4pde5q 61 25 percentage percentage NN work_kv3srcrerrazfgb2arzc4pde5q 61 26 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 61 27 allows allow VBZ work_kv3srcrerrazfgb2arzc4pde5q 61 28 for for IN work_kv3srcrerrazfgb2arzc4pde5q 61 29 quick quick JJ work_kv3srcrerrazfgb2arzc4pde5q 61 30 identification identification NN work_kv3srcrerrazfgb2arzc4pde5q 61 31 of of IN work_kv3srcrerrazfgb2arzc4pde5q 61 32 cases case NNS work_kv3srcrerrazfgb2arzc4pde5q 61 33 where where WRB work_kv3srcrerrazfgb2arzc4pde5q 61 34 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 61 35 track track NN work_kv3srcrerrazfgb2arzc4pde5q 61 36 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 61 37 either either CC work_kv3srcrerrazfgb2arzc4pde5q 61 38 at at IN work_kv3srcrerrazfgb2arzc4pde5q 61 39 the the DT work_kv3srcrerrazfgb2arzc4pde5q 61 40 end end NN work_kv3srcrerrazfgb2arzc4pde5q 61 41 or or CC work_kv3srcrerrazfgb2arzc4pde5q 61 42 at at IN work_kv3srcrerrazfgb2arzc4pde5q 61 43 the the DT work_kv3srcrerrazfgb2arzc4pde5q 61 44 beginning beginning NN work_kv3srcrerrazfgb2arzc4pde5q 61 45 of of IN work_kv3srcrerrazfgb2arzc4pde5q 61 46 the the DT work_kv3srcrerrazfgb2arzc4pde5q 61 47 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 61 48 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 61 49 and and CC work_kv3srcrerrazfgb2arzc4pde5q 61 50 , , , work_kv3srcrerrazfgb2arzc4pde5q 61 51 finally finally RB work_kv3srcrerrazfgb2arzc4pde5q 61 52 , , , work_kv3srcrerrazfgb2arzc4pde5q 61 53 the the DT work_kv3srcrerrazfgb2arzc4pde5q 61 54 identified identify VBN work_kv3srcrerrazfgb2arzc4pde5q 61 55 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 61 56 track track NN work_kv3srcrerrazfgb2arzc4pde5q 61 57 with with IN work_kv3srcrerrazfgb2arzc4pde5q 61 58 a a DT work_kv3srcrerrazfgb2arzc4pde5q 61 59 context context NN work_kv3srcrerrazfgb2arzc4pde5q 61 60 of of IN work_kv3srcrerrazfgb2arzc4pde5q 61 61 surrounding surround VBG work_kv3srcrerrazfgb2arzc4pde5q 61 62 sequence sequence NN work_kv3srcrerrazfgb2arzc4pde5q 61 63 . . . work_kv3srcrerrazfgb2arzc4pde5q 62 1 All all DT work_kv3srcrerrazfgb2arzc4pde5q 62 2 columns column NNS work_kv3srcrerrazfgb2arzc4pde5q 62 3 are be VBP work_kv3srcrerrazfgb2arzc4pde5q 62 4 sortable sortable JJ work_kv3srcrerrazfgb2arzc4pde5q 62 5 . . . work_kv3srcrerrazfgb2arzc4pde5q 63 1 By by IN work_kv3srcrerrazfgb2arzc4pde5q 63 2 default default NN work_kv3srcrerrazfgb2arzc4pde5q 63 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 63 4 the the DT work_kv3srcrerrazfgb2arzc4pde5q 63 5 table table NN work_kv3srcrerrazfgb2arzc4pde5q 63 6 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 63 7 alphabetically alphabetically RB work_kv3srcrerrazfgb2arzc4pde5q 63 8 sorted sort VBN work_kv3srcrerrazfgb2arzc4pde5q 63 9 by by IN work_kv3srcrerrazfgb2arzc4pde5q 63 10 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 63 11 name name NN work_kv3srcrerrazfgb2arzc4pde5q 63 12 . . . work_kv3srcrerrazfgb2arzc4pde5q 64 1 Sorting sort VBG work_kv3srcrerrazfgb2arzc4pde5q 64 2 gene gene NN work_kv3srcrerrazfgb2arzc4pde5q 64 3 and and CC work_kv3srcrerrazfgb2arzc4pde5q 64 4 transcript transcript NN work_kv3srcrerrazfgb2arzc4pde5q 64 5 IDs IDs NNP work_kv3srcrerrazfgb2arzc4pde5q 64 6 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 64 7 also also RB work_kv3srcrerrazfgb2arzc4pde5q 64 8 alphabetical alphabetical JJ work_kv3srcrerrazfgb2arzc4pde5q 64 9 . . . work_kv3srcrerrazfgb2arzc4pde5q 65 1 Location location NN work_kv3srcrerrazfgb2arzc4pde5q 65 2 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 65 3 sorted sort VBN work_kv3srcrerrazfgb2arzc4pde5q 65 4 numerically numerically RB work_kv3srcrerrazfgb2arzc4pde5q 65 5 . . . work_kv3srcrerrazfgb2arzc4pde5q 66 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 66 2 rows row NNS work_kv3srcrerrazfgb2arzc4pde5q 66 3 with with IN work_kv3srcrerrazfgb2arzc4pde5q 66 4 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 66 5 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 66 6 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 66 7 sortable sortable JJ work_kv3srcrerrazfgb2arzc4pde5q 66 8 by by IN work_kv3srcrerrazfgb2arzc4pde5q 66 9 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 66 10 track track NN work_kv3srcrerrazfgb2arzc4pde5q 66 11 length length NN work_kv3srcrerrazfgb2arzc4pde5q 66 12 , , , work_kv3srcrerrazfgb2arzc4pde5q 66 13 so so CC work_kv3srcrerrazfgb2arzc4pde5q 66 14 the the DT work_kv3srcrerrazfgb2arzc4pde5q 66 15 user user NN work_kv3srcrerrazfgb2arzc4pde5q 66 16 can can MD work_kv3srcrerrazfgb2arzc4pde5q 66 17 quickly quickly RB work_kv3srcrerrazfgb2arzc4pde5q 66 18 identify identify VB work_kv3srcrerrazfgb2arzc4pde5q 66 19 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 66 20 with with IN work_kv3srcrerrazfgb2arzc4pde5q 66 21 the the DT work_kv3srcrerrazfgb2arzc4pde5q 66 22 longest long JJS work_kv3srcrerrazfgb2arzc4pde5q 66 23 track track NN work_kv3srcrerrazfgb2arzc4pde5q 66 24 in in IN work_kv3srcrerrazfgb2arzc4pde5q 66 25 particular particular JJ work_kv3srcrerrazfgb2arzc4pde5q 66 26 organism organism NN work_kv3srcrerrazfgb2arzc4pde5q 66 27 . . . work_kv3srcrerrazfgb2arzc4pde5q 67 1 Obviously obviously RB work_kv3srcrerrazfgb2arzc4pde5q 67 2 , , , work_kv3srcrerrazfgb2arzc4pde5q 67 3 due due IN work_kv3srcrerrazfgb2arzc4pde5q 67 4 to to IN work_kv3srcrerrazfgb2arzc4pde5q 67 5 the the DT work_kv3srcrerrazfgb2arzc4pde5q 67 6 used use VBN work_kv3srcrerrazfgb2arzc4pde5q 67 7 pattern pattern NN work_kv3srcrerrazfgb2arzc4pde5q 67 8 , , , work_kv3srcrerrazfgb2arzc4pde5q 67 9 the the DT work_kv3srcrerrazfgb2arzc4pde5q 67 10 shortest short JJS work_kv3srcrerrazfgb2arzc4pde5q 67 11 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 67 12 tracks track VBZ work_kv3srcrerrazfgb2arzc4pde5q 67 13 Habich Habich NNP work_kv3srcrerrazfgb2arzc4pde5q 67 14 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 67 15 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 67 16 . . . work_kv3srcrerrazfgb2arzc4pde5q 68 1 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 68 2 2016 2016 CD work_kv3srcrerrazfgb2arzc4pde5q 68 3 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 68 4 , , , work_kv3srcrerrazfgb2arzc4pde5q 68 5 PeerJ PeerJ NNP work_kv3srcrerrazfgb2arzc4pde5q 68 6 Comput Comput NNP work_kv3srcrerrazfgb2arzc4pde5q 68 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 69 1 Sci Sci NNP work_kv3srcrerrazfgb2arzc4pde5q 69 2 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 69 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 69 4 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 69 5 10.7717 10.7717 CD work_kv3srcrerrazfgb2arzc4pde5q 69 6 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 69 7 peerj peerj NNP work_kv3srcrerrazfgb2arzc4pde5q 69 8 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 69 9 cs.45 cs.45 NNP work_kv3srcrerrazfgb2arzc4pde5q 69 10 4/7 4/7 CD work_kv3srcrerrazfgb2arzc4pde5q 69 11 https://peerj.com/computer-science/ https://peerj.com/computer-science/ NNS work_kv3srcrerrazfgb2arzc4pde5q 69 12 http://dx.doi.org/10.7717/peerj-cs.45 http://dx.doi.org/10.7717/peerj-cs.45 NN work_kv3srcrerrazfgb2arzc4pde5q 69 13 have have VB work_kv3srcrerrazfgb2arzc4pde5q 69 14 length length NN work_kv3srcrerrazfgb2arzc4pde5q 69 15 of of IN work_kv3srcrerrazfgb2arzc4pde5q 69 16 12 12 CD work_kv3srcrerrazfgb2arzc4pde5q 69 17 nucleotides nucleotide NNS work_kv3srcrerrazfgb2arzc4pde5q 69 18 . . . work_kv3srcrerrazfgb2arzc4pde5q 70 1 To to TO work_kv3srcrerrazfgb2arzc4pde5q 70 2 facilitate facilitate VB work_kv3srcrerrazfgb2arzc4pde5q 70 3 quick quick JJ work_kv3srcrerrazfgb2arzc4pde5q 70 4 interaction interaction NN work_kv3srcrerrazfgb2arzc4pde5q 70 5 with with IN work_kv3srcrerrazfgb2arzc4pde5q 70 6 tables table NNS work_kv3srcrerrazfgb2arzc4pde5q 70 7 , , , work_kv3srcrerrazfgb2arzc4pde5q 70 8 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 70 9 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 70 10 used use VBN work_kv3srcrerrazfgb2arzc4pde5q 70 11 Bootstrap Bootstrap NNP work_kv3srcrerrazfgb2arzc4pde5q 70 12 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 70 13 table table NN work_kv3srcrerrazfgb2arzc4pde5q 70 14 library library NN work_kv3srcrerrazfgb2arzc4pde5q 70 15 that that WDT work_kv3srcrerrazfgb2arzc4pde5q 70 16 allows allow VBZ work_kv3srcrerrazfgb2arzc4pde5q 70 17 for for IN work_kv3srcrerrazfgb2arzc4pde5q 70 18 easy easy JJ work_kv3srcrerrazfgb2arzc4pde5q 70 19 and and CC work_kv3srcrerrazfgb2arzc4pde5q 70 20 intuitive intuitive JJ work_kv3srcrerrazfgb2arzc4pde5q 70 21 sorting sort VBG work_kv3srcrerrazfgb2arzc4pde5q 70 22 and and CC work_kv3srcrerrazfgb2arzc4pde5q 70 23 searching search VBG work_kv3srcrerrazfgb2arzc4pde5q 70 24 through through IN work_kv3srcrerrazfgb2arzc4pde5q 70 25 all all DT work_kv3srcrerrazfgb2arzc4pde5q 70 26 fields field NNS work_kv3srcrerrazfgb2arzc4pde5q 70 27 in in IN work_kv3srcrerrazfgb2arzc4pde5q 70 28 particular particular JJ work_kv3srcrerrazfgb2arzc4pde5q 70 29 genome genome NN work_kv3srcrerrazfgb2arzc4pde5q 70 30 . . . work_kv3srcrerrazfgb2arzc4pde5q 71 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 71 2 project project NN work_kv3srcrerrazfgb2arzc4pde5q 71 3 was be VBD work_kv3srcrerrazfgb2arzc4pde5q 71 4 created create VBN work_kv3srcrerrazfgb2arzc4pde5q 71 5 using use VBG work_kv3srcrerrazfgb2arzc4pde5q 71 6 Python Python NNP work_kv3srcrerrazfgb2arzc4pde5q 71 7 2.7 2.7 CD work_kv3srcrerrazfgb2arzc4pde5q 71 8 . . . work_kv3srcrerrazfgb2arzc4pde5q 72 1 To to TO work_kv3srcrerrazfgb2arzc4pde5q 72 2 parse parse VB work_kv3srcrerrazfgb2arzc4pde5q 72 3 biological biological JJ work_kv3srcrerrazfgb2arzc4pde5q 72 4 data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 72 5 , , , work_kv3srcrerrazfgb2arzc4pde5q 72 6 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 72 7 used use VBD work_kv3srcrerrazfgb2arzc4pde5q 72 8 Biopython Biopython NNP work_kv3srcrerrazfgb2arzc4pde5q 72 9 1.65 1.65 CD work_kv3srcrerrazfgb2arzc4pde5q 72 10 . . . work_kv3srcrerrazfgb2arzc4pde5q 73 1 To to TO work_kv3srcrerrazfgb2arzc4pde5q 73 2 compare compare VB work_kv3srcrerrazfgb2arzc4pde5q 73 3 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 73 4 and and CC work_kv3srcrerrazfgb2arzc4pde5q 73 5 cdna cdna VBZ work_kv3srcrerrazfgb2arzc4pde5q 73 6 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 73 7 , , , work_kv3srcrerrazfgb2arzc4pde5q 73 8 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 73 9 used use VBD work_kv3srcrerrazfgb2arzc4pde5q 73 10 local local JJ work_kv3srcrerrazfgb2arzc4pde5q 73 11 version version NN work_kv3srcrerrazfgb2arzc4pde5q 73 12 of of IN work_kv3srcrerrazfgb2arzc4pde5q 73 13 NCBI NCBI NNP work_kv3srcrerrazfgb2arzc4pde5q 73 14 blast+ blast+ NNP work_kv3srcrerrazfgb2arzc4pde5q 73 15 software software NN work_kv3srcrerrazfgb2arzc4pde5q 73 16 v. v. CC work_kv3srcrerrazfgb2arzc4pde5q 73 17 2.2.31 2.2.31 CD work_kv3srcrerrazfgb2arzc4pde5q 73 18 . . . work_kv3srcrerrazfgb2arzc4pde5q 74 1 To to TO work_kv3srcrerrazfgb2arzc4pde5q 74 2 run run VB work_kv3srcrerrazfgb2arzc4pde5q 74 3 the the DT work_kv3srcrerrazfgb2arzc4pde5q 74 4 web web NN work_kv3srcrerrazfgb2arzc4pde5q 74 5 service service NN work_kv3srcrerrazfgb2arzc4pde5q 74 6 , , , work_kv3srcrerrazfgb2arzc4pde5q 74 7 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 74 8 used use VBD work_kv3srcrerrazfgb2arzc4pde5q 74 9 Flask Flask NNP work_kv3srcrerrazfgb2arzc4pde5q 74 10 v.0.10.1 v.0.10.1 NN work_kv3srcrerrazfgb2arzc4pde5q 74 11 . . . work_kv3srcrerrazfgb2arzc4pde5q 75 1 We -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 75 2 used use VBD work_kv3srcrerrazfgb2arzc4pde5q 75 3 SQLite3 SQLite3 NNS work_kv3srcrerrazfgb2arzc4pde5q 75 4 database database NN work_kv3srcrerrazfgb2arzc4pde5q 75 5 engine engine NN work_kv3srcrerrazfgb2arzc4pde5q 75 6 and and CC work_kv3srcrerrazfgb2arzc4pde5q 75 7 SQLAlchemy sqlalchemy NN work_kv3srcrerrazfgb2arzc4pde5q 75 8 for for IN work_kv3srcrerrazfgb2arzc4pde5q 75 9 database database NN work_kv3srcrerrazfgb2arzc4pde5q 75 10 access access NN work_kv3srcrerrazfgb2arzc4pde5q 75 11 . . . work_kv3srcrerrazfgb2arzc4pde5q 76 1 To to TO work_kv3srcrerrazfgb2arzc4pde5q 76 2 query query VB work_kv3srcrerrazfgb2arzc4pde5q 76 3 the the DT work_kv3srcrerrazfgb2arzc4pde5q 76 4 Ensembl Ensembl NNP work_kv3srcrerrazfgb2arzc4pde5q 76 5 database database NN work_kv3srcrerrazfgb2arzc4pde5q 76 6 , , , work_kv3srcrerrazfgb2arzc4pde5q 76 7 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 76 8 used use VBD work_kv3srcrerrazfgb2arzc4pde5q 76 9 mysql mysql NNP work_kv3srcrerrazfgb2arzc4pde5q 76 10 client client NN work_kv3srcrerrazfgb2arzc4pde5q 76 11 . . . work_kv3srcrerrazfgb2arzc4pde5q 77 1 We -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 77 2 also also RB work_kv3srcrerrazfgb2arzc4pde5q 77 3 used use VBD work_kv3srcrerrazfgb2arzc4pde5q 77 4 two two CD work_kv3srcrerrazfgb2arzc4pde5q 77 5 other other JJ work_kv3srcrerrazfgb2arzc4pde5q 77 6 Python Python NNP work_kv3srcrerrazfgb2arzc4pde5q 77 7 libraries library NNS work_kv3srcrerrazfgb2arzc4pde5q 77 8 : : : work_kv3srcrerrazfgb2arzc4pde5q 77 9 xmltodict xmltodict NN work_kv3srcrerrazfgb2arzc4pde5q 77 10 and and CC work_kv3srcrerrazfgb2arzc4pde5q 77 11 requests request NNS work_kv3srcrerrazfgb2arzc4pde5q 77 12 . . . work_kv3srcrerrazfgb2arzc4pde5q 78 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 78 2 most most RBS work_kv3srcrerrazfgb2arzc4pde5q 78 3 difficult difficult JJ work_kv3srcrerrazfgb2arzc4pde5q 78 4 task task NN work_kv3srcrerrazfgb2arzc4pde5q 78 5 was be VBD work_kv3srcrerrazfgb2arzc4pde5q 78 6 to to TO work_kv3srcrerrazfgb2arzc4pde5q 78 7 ensure ensure VB work_kv3srcrerrazfgb2arzc4pde5q 78 8 short short JJ work_kv3srcrerrazfgb2arzc4pde5q 78 9 pageload pageload NN work_kv3srcrerrazfgb2arzc4pde5q 78 10 times time NNS work_kv3srcrerrazfgb2arzc4pde5q 78 11 given give VBN work_kv3srcrerrazfgb2arzc4pde5q 78 12 the the DT work_kv3srcrerrazfgb2arzc4pde5q 78 13 large large JJ work_kv3srcrerrazfgb2arzc4pde5q 78 14 dataset dataset NN work_kv3srcrerrazfgb2arzc4pde5q 78 15 on on IN work_kv3srcrerrazfgb2arzc4pde5q 78 16 which which WDT work_kv3srcrerrazfgb2arzc4pde5q 78 17 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 78 18 worked work VBD work_kv3srcrerrazfgb2arzc4pde5q 78 19 . . . work_kv3srcrerrazfgb2arzc4pde5q 79 1 To to TO work_kv3srcrerrazfgb2arzc4pde5q 79 2 solve solve VB work_kv3srcrerrazfgb2arzc4pde5q 79 3 this this DT work_kv3srcrerrazfgb2arzc4pde5q 79 4 problem problem NN work_kv3srcrerrazfgb2arzc4pde5q 79 5 , , , work_kv3srcrerrazfgb2arzc4pde5q 79 6 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 79 7 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 79 8 created create VBN work_kv3srcrerrazfgb2arzc4pde5q 79 9 additional additional JJ work_kv3srcrerrazfgb2arzc4pde5q 79 10 tables table NNS work_kv3srcrerrazfgb2arzc4pde5q 79 11 in in IN work_kv3srcrerrazfgb2arzc4pde5q 79 12 database database NN work_kv3srcrerrazfgb2arzc4pde5q 79 13 which which WDT work_kv3srcrerrazfgb2arzc4pde5q 79 14 contain contain VBP work_kv3srcrerrazfgb2arzc4pde5q 79 15 metadata metadata NN work_kv3srcrerrazfgb2arzc4pde5q 79 16 with with IN work_kv3srcrerrazfgb2arzc4pde5q 79 17 the the DT work_kv3srcrerrazfgb2arzc4pde5q 79 18 heaviest heavy JJS work_kv3srcrerrazfgb2arzc4pde5q 79 19 queries query NNS work_kv3srcrerrazfgb2arzc4pde5q 79 20 . . . work_kv3srcrerrazfgb2arzc4pde5q 80 1 This this DT work_kv3srcrerrazfgb2arzc4pde5q 80 2 solution solution NN work_kv3srcrerrazfgb2arzc4pde5q 80 3 decreased decrease VBD work_kv3srcrerrazfgb2arzc4pde5q 80 4 time time NN work_kv3srcrerrazfgb2arzc4pde5q 80 5 of of IN work_kv3srcrerrazfgb2arzc4pde5q 80 6 loading loading NN work_kv3srcrerrazfgb2arzc4pde5q 80 7 more more JJR work_kv3srcrerrazfgb2arzc4pde5q 80 8 than than IN work_kv3srcrerrazfgb2arzc4pde5q 80 9 20 20 CD work_kv3srcrerrazfgb2arzc4pde5q 80 10 times time NNS work_kv3srcrerrazfgb2arzc4pde5q 80 11 . . . work_kv3srcrerrazfgb2arzc4pde5q 81 1 We -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 81 2 have have VBP work_kv3srcrerrazfgb2arzc4pde5q 81 3 designed design VBN work_kv3srcrerrazfgb2arzc4pde5q 81 4 a a DT work_kv3srcrerrazfgb2arzc4pde5q 81 5 two two CD work_kv3srcrerrazfgb2arzc4pde5q 81 6 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 81 7 step step NN work_kv3srcrerrazfgb2arzc4pde5q 81 8 architecture architecture NN work_kv3srcrerrazfgb2arzc4pde5q 81 9 . . . work_kv3srcrerrazfgb2arzc4pde5q 82 1 In in IN work_kv3srcrerrazfgb2arzc4pde5q 82 2 the the DT work_kv3srcrerrazfgb2arzc4pde5q 82 3 first first JJ work_kv3srcrerrazfgb2arzc4pde5q 82 4 step step NN work_kv3srcrerrazfgb2arzc4pde5q 82 5 , , , work_kv3srcrerrazfgb2arzc4pde5q 82 6 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 82 7 analyse analyse VBP work_kv3srcrerrazfgb2arzc4pde5q 82 8 data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 82 9 from from IN work_kv3srcrerrazfgb2arzc4pde5q 82 10 the the DT work_kv3srcrerrazfgb2arzc4pde5q 82 11 Ensembl Ensembl NNP work_kv3srcrerrazfgb2arzc4pde5q 82 12 database database NN work_kv3srcrerrazfgb2arzc4pde5q 82 13 and and CC work_kv3srcrerrazfgb2arzc4pde5q 82 14 create create VB work_kv3srcrerrazfgb2arzc4pde5q 82 15 our -PRON- PRP$ work_kv3srcrerrazfgb2arzc4pde5q 82 16 database database NN work_kv3srcrerrazfgb2arzc4pde5q 82 17 with with IN work_kv3srcrerrazfgb2arzc4pde5q 82 18 12A-1 12a-1 CD work_kv3srcrerrazfgb2arzc4pde5q 82 19 pattern pattern NN work_kv3srcrerrazfgb2arzc4pde5q 82 20 . . . work_kv3srcrerrazfgb2arzc4pde5q 83 1 In in IN work_kv3srcrerrazfgb2arzc4pde5q 83 2 the the DT work_kv3srcrerrazfgb2arzc4pde5q 83 3 second second JJ work_kv3srcrerrazfgb2arzc4pde5q 83 4 step step NN work_kv3srcrerrazfgb2arzc4pde5q 83 5 , , , work_kv3srcrerrazfgb2arzc4pde5q 83 6 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 83 7 use use VBP work_kv3srcrerrazfgb2arzc4pde5q 83 8 created create VBN work_kv3srcrerrazfgb2arzc4pde5q 83 9 database database NN work_kv3srcrerrazfgb2arzc4pde5q 83 10 to to TO work_kv3srcrerrazfgb2arzc4pde5q 83 11 provide provide VB work_kv3srcrerrazfgb2arzc4pde5q 83 12 information information NN work_kv3srcrerrazfgb2arzc4pde5q 83 13 to to IN work_kv3srcrerrazfgb2arzc4pde5q 83 14 the the DT work_kv3srcrerrazfgb2arzc4pde5q 83 15 web web NN work_kv3srcrerrazfgb2arzc4pde5q 83 16 service service NN work_kv3srcrerrazfgb2arzc4pde5q 83 17 . . . work_kv3srcrerrazfgb2arzc4pde5q 84 1 This this DT work_kv3srcrerrazfgb2arzc4pde5q 84 2 architecture architecture NN work_kv3srcrerrazfgb2arzc4pde5q 84 3 allows allow VBZ work_kv3srcrerrazfgb2arzc4pde5q 84 4 one one PRP work_kv3srcrerrazfgb2arzc4pde5q 84 5 to to TO work_kv3srcrerrazfgb2arzc4pde5q 84 6 separate separate VB work_kv3srcrerrazfgb2arzc4pde5q 84 7 obtaining obtain VBG work_kv3srcrerrazfgb2arzc4pde5q 84 8 data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 84 9 and and CC work_kv3srcrerrazfgb2arzc4pde5q 84 10 running run VBG work_kv3srcrerrazfgb2arzc4pde5q 84 11 the the DT work_kv3srcrerrazfgb2arzc4pde5q 84 12 web web NN work_kv3srcrerrazfgb2arzc4pde5q 84 13 service service NN work_kv3srcrerrazfgb2arzc4pde5q 84 14 , , , work_kv3srcrerrazfgb2arzc4pde5q 84 15 thus thus RB work_kv3srcrerrazfgb2arzc4pde5q 84 16 , , , work_kv3srcrerrazfgb2arzc4pde5q 84 17 during during IN work_kv3srcrerrazfgb2arzc4pde5q 84 18 analysis analysis NN work_kv3srcrerrazfgb2arzc4pde5q 84 19 of of IN work_kv3srcrerrazfgb2arzc4pde5q 84 20 new new JJ work_kv3srcrerrazfgb2arzc4pde5q 84 21 version version NN work_kv3srcrerrazfgb2arzc4pde5q 84 22 of of IN work_kv3srcrerrazfgb2arzc4pde5q 84 23 Ensembl Ensembl NNP work_kv3srcrerrazfgb2arzc4pde5q 84 24 data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 84 25 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 84 26 still still RB work_kv3srcrerrazfgb2arzc4pde5q 84 27 can can MD work_kv3srcrerrazfgb2arzc4pde5q 84 28 provide provide VB work_kv3srcrerrazfgb2arzc4pde5q 84 29 data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 84 30 about about IN work_kv3srcrerrazfgb2arzc4pde5q 84 31 old old JJ work_kv3srcrerrazfgb2arzc4pde5q 84 32 version version NN work_kv3srcrerrazfgb2arzc4pde5q 84 33 , , , work_kv3srcrerrazfgb2arzc4pde5q 84 34 and and CC work_kv3srcrerrazfgb2arzc4pde5q 84 35 changes change NNS work_kv3srcrerrazfgb2arzc4pde5q 84 36 between between IN work_kv3srcrerrazfgb2arzc4pde5q 84 37 versions version NNS work_kv3srcrerrazfgb2arzc4pde5q 84 38 can can MD work_kv3srcrerrazfgb2arzc4pde5q 84 39 be be VB work_kv3srcrerrazfgb2arzc4pde5q 84 40 effected effect VBN work_kv3srcrerrazfgb2arzc4pde5q 84 41 in in IN work_kv3srcrerrazfgb2arzc4pde5q 84 42 seconds second NNS work_kv3srcrerrazfgb2arzc4pde5q 84 43 without without IN work_kv3srcrerrazfgb2arzc4pde5q 84 44 the the DT work_kv3srcrerrazfgb2arzc4pde5q 84 45 notice notice NN work_kv3srcrerrazfgb2arzc4pde5q 84 46 of of IN work_kv3srcrerrazfgb2arzc4pde5q 84 47 the the DT work_kv3srcrerrazfgb2arzc4pde5q 84 48 user user NN work_kv3srcrerrazfgb2arzc4pde5q 84 49 . . . work_kv3srcrerrazfgb2arzc4pde5q 85 1 In in IN work_kv3srcrerrazfgb2arzc4pde5q 85 2 the the DT work_kv3srcrerrazfgb2arzc4pde5q 85 3 future future NN work_kv3srcrerrazfgb2arzc4pde5q 85 4 , , , work_kv3srcrerrazfgb2arzc4pde5q 85 5 we -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 85 6 will will MD work_kv3srcrerrazfgb2arzc4pde5q 85 7 work work VB work_kv3srcrerrazfgb2arzc4pde5q 85 8 on on IN work_kv3srcrerrazfgb2arzc4pde5q 85 9 parallelization parallelization NN work_kv3srcrerrazfgb2arzc4pde5q 85 10 process process NN work_kv3srcrerrazfgb2arzc4pde5q 85 11 of of IN work_kv3srcrerrazfgb2arzc4pde5q 85 12 Ensembl Ensembl NNP work_kv3srcrerrazfgb2arzc4pde5q 85 13 data data NN work_kv3srcrerrazfgb2arzc4pde5q 85 14 analysis analysis NN work_kv3srcrerrazfgb2arzc4pde5q 85 15 to to TO work_kv3srcrerrazfgb2arzc4pde5q 85 16 speed speed VB work_kv3srcrerrazfgb2arzc4pde5q 85 17 up up RP work_kv3srcrerrazfgb2arzc4pde5q 85 18 the the DT work_kv3srcrerrazfgb2arzc4pde5q 85 19 first first JJ work_kv3srcrerrazfgb2arzc4pde5q 85 20 step step NN work_kv3srcrerrazfgb2arzc4pde5q 85 21 . . . work_kv3srcrerrazfgb2arzc4pde5q 86 1 It -PRON- PRP work_kv3srcrerrazfgb2arzc4pde5q 86 2 is be VBZ work_kv3srcrerrazfgb2arzc4pde5q 86 3 likely likely JJ work_kv3srcrerrazfgb2arzc4pde5q 86 4 that that IN work_kv3srcrerrazfgb2arzc4pde5q 86 5 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 86 6 segments segment NNS work_kv3srcrerrazfgb2arzc4pde5q 86 7 are be VBP work_kv3srcrerrazfgb2arzc4pde5q 86 8 not not RB work_kv3srcrerrazfgb2arzc4pde5q 86 9 the the DT work_kv3srcrerrazfgb2arzc4pde5q 86 10 only only JJ work_kv3srcrerrazfgb2arzc4pde5q 86 11 sequence sequence NN work_kv3srcrerrazfgb2arzc4pde5q 86 12 determinants determinant NNS work_kv3srcrerrazfgb2arzc4pde5q 86 13 of of IN work_kv3srcrerrazfgb2arzc4pde5q 86 14 translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 86 15 efficiency efficiency NN work_kv3srcrerrazfgb2arzc4pde5q 86 16 in in IN work_kv3srcrerrazfgb2arzc4pde5q 86 17 coding code VBG work_kv3srcrerrazfgb2arzc4pde5q 86 18 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 86 19 , , , work_kv3srcrerrazfgb2arzc4pde5q 86 20 and and CC work_kv3srcrerrazfgb2arzc4pde5q 86 21 further further JJ work_kv3srcrerrazfgb2arzc4pde5q 86 22 studies study NNS work_kv3srcrerrazfgb2arzc4pde5q 86 23 will will MD work_kv3srcrerrazfgb2arzc4pde5q 86 24 discover discover VB work_kv3srcrerrazfgb2arzc4pde5q 86 25 more more JJR work_kv3srcrerrazfgb2arzc4pde5q 86 26 of of IN work_kv3srcrerrazfgb2arzc4pde5q 86 27 such such JJ work_kv3srcrerrazfgb2arzc4pde5q 86 28 motifs motif NNS work_kv3srcrerrazfgb2arzc4pde5q 86 29 or or CC work_kv3srcrerrazfgb2arzc4pde5q 86 30 different different JJ work_kv3srcrerrazfgb2arzc4pde5q 86 31 lengths length NNS work_kv3srcrerrazfgb2arzc4pde5q 86 32 of of IN work_kv3srcrerrazfgb2arzc4pde5q 86 33 minimal minimal JJ work_kv3srcrerrazfgb2arzc4pde5q 86 34 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 86 35 pattern pattern NN work_kv3srcrerrazfgb2arzc4pde5q 86 36 for for IN work_kv3srcrerrazfgb2arzc4pde5q 86 37 a a DT work_kv3srcrerrazfgb2arzc4pde5q 86 38 particular particular JJ work_kv3srcrerrazfgb2arzc4pde5q 86 39 organism organism NN work_kv3srcrerrazfgb2arzc4pde5q 86 40 . . . work_kv3srcrerrazfgb2arzc4pde5q 87 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 87 2 design design NN work_kv3srcrerrazfgb2arzc4pde5q 87 3 of of IN work_kv3srcrerrazfgb2arzc4pde5q 87 4 the the DT work_kv3srcrerrazfgb2arzc4pde5q 87 5 PATACSDB PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 87 6 engine engine NN work_kv3srcrerrazfgb2arzc4pde5q 87 7 allows allow VBZ work_kv3srcrerrazfgb2arzc4pde5q 87 8 for for IN work_kv3srcrerrazfgb2arzc4pde5q 87 9 easy easy JJ work_kv3srcrerrazfgb2arzc4pde5q 87 10 modification modification NN work_kv3srcrerrazfgb2arzc4pde5q 87 11 towards towards IN work_kv3srcrerrazfgb2arzc4pde5q 87 12 finding find VBG work_kv3srcrerrazfgb2arzc4pde5q 87 13 and and CC work_kv3srcrerrazfgb2arzc4pde5q 87 14 cataloguing cataloguing NN work_kv3srcrerrazfgb2arzc4pde5q 87 15 of of IN work_kv3srcrerrazfgb2arzc4pde5q 87 16 novel novel JJ work_kv3srcrerrazfgb2arzc4pde5q 87 17 sequence sequence NN work_kv3srcrerrazfgb2arzc4pde5q 87 18 patterns pattern NNS work_kv3srcrerrazfgb2arzc4pde5q 87 19 . . . work_kv3srcrerrazfgb2arzc4pde5q 88 1 ADDITIONAL additional JJ work_kv3srcrerrazfgb2arzc4pde5q 88 2 INFORMATION information NN work_kv3srcrerrazfgb2arzc4pde5q 88 3 AND and CC work_kv3srcrerrazfgb2arzc4pde5q 88 4 DECLARATIONS declaration NNS work_kv3srcrerrazfgb2arzc4pde5q 88 5 Funding fund VBG work_kv3srcrerrazfgb2arzc4pde5q 88 6 The the DT work_kv3srcrerrazfgb2arzc4pde5q 88 7 authors author NNS work_kv3srcrerrazfgb2arzc4pde5q 88 8 received receive VBD work_kv3srcrerrazfgb2arzc4pde5q 88 9 no no DT work_kv3srcrerrazfgb2arzc4pde5q 88 10 funding funding NN work_kv3srcrerrazfgb2arzc4pde5q 88 11 for for IN work_kv3srcrerrazfgb2arzc4pde5q 88 12 this this DT work_kv3srcrerrazfgb2arzc4pde5q 88 13 work work NN work_kv3srcrerrazfgb2arzc4pde5q 88 14 . . . work_kv3srcrerrazfgb2arzc4pde5q 89 1 Competing compete VBG work_kv3srcrerrazfgb2arzc4pde5q 89 2 Interests interest NNS work_kv3srcrerrazfgb2arzc4pde5q 89 3 The the DT work_kv3srcrerrazfgb2arzc4pde5q 89 4 authors author NNS work_kv3srcrerrazfgb2arzc4pde5q 89 5 declare declare VBP work_kv3srcrerrazfgb2arzc4pde5q 89 6 there there EX work_kv3srcrerrazfgb2arzc4pde5q 89 7 are be VBP work_kv3srcrerrazfgb2arzc4pde5q 89 8 no no DT work_kv3srcrerrazfgb2arzc4pde5q 89 9 competing compete VBG work_kv3srcrerrazfgb2arzc4pde5q 89 10 interests interest NNS work_kv3srcrerrazfgb2arzc4pde5q 89 11 . . . work_kv3srcrerrazfgb2arzc4pde5q 90 1 Author author NN work_kv3srcrerrazfgb2arzc4pde5q 90 2 Contributions Contributions NNPS work_kv3srcrerrazfgb2arzc4pde5q 90 3 • • NNP work_kv3srcrerrazfgb2arzc4pde5q 90 4 Malgorzata Malgorzata NNP work_kv3srcrerrazfgb2arzc4pde5q 90 5 Habich Habich NNP work_kv3srcrerrazfgb2arzc4pde5q 90 6 conceived conceive VBD work_kv3srcrerrazfgb2arzc4pde5q 90 7 and and CC work_kv3srcrerrazfgb2arzc4pde5q 90 8 designed design VBD work_kv3srcrerrazfgb2arzc4pde5q 90 9 the the DT work_kv3srcrerrazfgb2arzc4pde5q 90 10 experiments experiment NNS work_kv3srcrerrazfgb2arzc4pde5q 90 11 , , , work_kv3srcrerrazfgb2arzc4pde5q 90 12 performed perform VBD work_kv3srcrerrazfgb2arzc4pde5q 90 13 the the DT work_kv3srcrerrazfgb2arzc4pde5q 90 14 experi- experi- NN work_kv3srcrerrazfgb2arzc4pde5q 90 15 ments ment NNS work_kv3srcrerrazfgb2arzc4pde5q 90 16 , , , work_kv3srcrerrazfgb2arzc4pde5q 90 17 analyzed analyze VBD work_kv3srcrerrazfgb2arzc4pde5q 90 18 the the DT work_kv3srcrerrazfgb2arzc4pde5q 90 19 data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 90 20 , , , work_kv3srcrerrazfgb2arzc4pde5q 90 21 contributed contribute VBD work_kv3srcrerrazfgb2arzc4pde5q 90 22 reagents reagent NNS work_kv3srcrerrazfgb2arzc4pde5q 90 23 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 90 24 materials material NNS work_kv3srcrerrazfgb2arzc4pde5q 90 25 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 90 26 analysis analysis NN work_kv3srcrerrazfgb2arzc4pde5q 90 27 tools tool NNS work_kv3srcrerrazfgb2arzc4pde5q 90 28 , , , work_kv3srcrerrazfgb2arzc4pde5q 90 29 wrote write VBD work_kv3srcrerrazfgb2arzc4pde5q 90 30 the the DT work_kv3srcrerrazfgb2arzc4pde5q 90 31 paper paper NN work_kv3srcrerrazfgb2arzc4pde5q 90 32 , , , work_kv3srcrerrazfgb2arzc4pde5q 90 33 performed perform VBD work_kv3srcrerrazfgb2arzc4pde5q 90 34 the the DT work_kv3srcrerrazfgb2arzc4pde5q 90 35 computation computation NN work_kv3srcrerrazfgb2arzc4pde5q 90 36 work work NN work_kv3srcrerrazfgb2arzc4pde5q 90 37 , , , work_kv3srcrerrazfgb2arzc4pde5q 90 38 reviewed review VBN work_kv3srcrerrazfgb2arzc4pde5q 90 39 drafts draft NNS work_kv3srcrerrazfgb2arzc4pde5q 90 40 of of IN work_kv3srcrerrazfgb2arzc4pde5q 90 41 the the DT work_kv3srcrerrazfgb2arzc4pde5q 90 42 paper paper NN work_kv3srcrerrazfgb2arzc4pde5q 90 43 . . . work_kv3srcrerrazfgb2arzc4pde5q 91 1 • • NNP work_kv3srcrerrazfgb2arzc4pde5q 91 2 Sergej Sergej NNP work_kv3srcrerrazfgb2arzc4pde5q 91 3 Djuranovic Djuranovic NNP work_kv3srcrerrazfgb2arzc4pde5q 91 4 conceived conceive VBD work_kv3srcrerrazfgb2arzc4pde5q 91 5 and and CC work_kv3srcrerrazfgb2arzc4pde5q 91 6 designed design VBD work_kv3srcrerrazfgb2arzc4pde5q 91 7 the the DT work_kv3srcrerrazfgb2arzc4pde5q 91 8 experiments experiment NNS work_kv3srcrerrazfgb2arzc4pde5q 91 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 91 10 wrote write VBD work_kv3srcrerrazfgb2arzc4pde5q 91 11 the the DT work_kv3srcrerrazfgb2arzc4pde5q 91 12 paper paper NN work_kv3srcrerrazfgb2arzc4pde5q 91 13 , , , work_kv3srcrerrazfgb2arzc4pde5q 91 14 reviewed review VBN work_kv3srcrerrazfgb2arzc4pde5q 91 15 drafts draft NNS work_kv3srcrerrazfgb2arzc4pde5q 91 16 of of IN work_kv3srcrerrazfgb2arzc4pde5q 91 17 the the DT work_kv3srcrerrazfgb2arzc4pde5q 91 18 paper paper NN work_kv3srcrerrazfgb2arzc4pde5q 91 19 . . . work_kv3srcrerrazfgb2arzc4pde5q 92 1 • • NNP work_kv3srcrerrazfgb2arzc4pde5q 92 2 Pawel Pawel NNP work_kv3srcrerrazfgb2arzc4pde5q 92 3 Szczesny Szczesny NNP work_kv3srcrerrazfgb2arzc4pde5q 92 4 conceived conceive VBD work_kv3srcrerrazfgb2arzc4pde5q 92 5 and and CC work_kv3srcrerrazfgb2arzc4pde5q 92 6 designed design VBD work_kv3srcrerrazfgb2arzc4pde5q 92 7 the the DT work_kv3srcrerrazfgb2arzc4pde5q 92 8 experiments experiment NNS work_kv3srcrerrazfgb2arzc4pde5q 92 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 92 10 performed perform VBD work_kv3srcrerrazfgb2arzc4pde5q 92 11 the the DT work_kv3srcrerrazfgb2arzc4pde5q 92 12 experiments experiment NNS work_kv3srcrerrazfgb2arzc4pde5q 92 13 , , , work_kv3srcrerrazfgb2arzc4pde5q 92 14 contributed contribute VBN work_kv3srcrerrazfgb2arzc4pde5q 92 15 reagents reagent NNS work_kv3srcrerrazfgb2arzc4pde5q 92 16 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 92 17 materials material NNS work_kv3srcrerrazfgb2arzc4pde5q 92 18 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 92 19 analysis analysis NN work_kv3srcrerrazfgb2arzc4pde5q 92 20 tools tool NNS work_kv3srcrerrazfgb2arzc4pde5q 92 21 , , , work_kv3srcrerrazfgb2arzc4pde5q 92 22 wrote write VBD work_kv3srcrerrazfgb2arzc4pde5q 92 23 the the DT work_kv3srcrerrazfgb2arzc4pde5q 92 24 paper paper NN work_kv3srcrerrazfgb2arzc4pde5q 92 25 , , , work_kv3srcrerrazfgb2arzc4pde5q 92 26 reviewed review VBN work_kv3srcrerrazfgb2arzc4pde5q 92 27 drafts draft NNS work_kv3srcrerrazfgb2arzc4pde5q 92 28 of of IN work_kv3srcrerrazfgb2arzc4pde5q 92 29 the the DT work_kv3srcrerrazfgb2arzc4pde5q 92 30 paper paper NN work_kv3srcrerrazfgb2arzc4pde5q 92 31 . . . work_kv3srcrerrazfgb2arzc4pde5q 93 1 Habich Habich NNP work_kv3srcrerrazfgb2arzc4pde5q 93 2 et et FW work_kv3srcrerrazfgb2arzc4pde5q 93 3 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 93 4 . . . work_kv3srcrerrazfgb2arzc4pde5q 94 1 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 94 2 2016 2016 CD work_kv3srcrerrazfgb2arzc4pde5q 94 3 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 94 4 , , , work_kv3srcrerrazfgb2arzc4pde5q 94 5 PeerJ PeerJ NNP work_kv3srcrerrazfgb2arzc4pde5q 94 6 Comput Comput NNP work_kv3srcrerrazfgb2arzc4pde5q 94 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 95 1 Sci Sci NNP work_kv3srcrerrazfgb2arzc4pde5q 95 2 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 95 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 95 4 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 95 5 10.7717 10.7717 CD work_kv3srcrerrazfgb2arzc4pde5q 95 6 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 95 7 peerj peerj NNP work_kv3srcrerrazfgb2arzc4pde5q 95 8 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 95 9 cs.45 cs.45 NNP work_kv3srcrerrazfgb2arzc4pde5q 95 10 5/7 5/7 CD work_kv3srcrerrazfgb2arzc4pde5q 95 11 https://peerj.com/computer-science/ https://peerj.com/computer-science/ CD work_kv3srcrerrazfgb2arzc4pde5q 95 12 http://dx.doi.org/10.7717/peerj-cs.45 http://dx.doi.org/10.7717/peerj-cs.45 NNP work_kv3srcrerrazfgb2arzc4pde5q 95 13 Data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 95 14 Availability availability NN work_kv3srcrerrazfgb2arzc4pde5q 95 15 The the DT work_kv3srcrerrazfgb2arzc4pde5q 95 16 following follow VBG work_kv3srcrerrazfgb2arzc4pde5q 95 17 information information NN work_kv3srcrerrazfgb2arzc4pde5q 95 18 was be VBD work_kv3srcrerrazfgb2arzc4pde5q 95 19 supplied supply VBN work_kv3srcrerrazfgb2arzc4pde5q 95 20 regarding regard VBG work_kv3srcrerrazfgb2arzc4pde5q 95 21 data datum NNS work_kv3srcrerrazfgb2arzc4pde5q 95 22 availability availability NN work_kv3srcrerrazfgb2arzc4pde5q 95 23 : : : work_kv3srcrerrazfgb2arzc4pde5q 95 24 https://github.com/habich/PATACSDB/. https://github.com/habich/patacsdb/. ADD work_kv3srcrerrazfgb2arzc4pde5q 96 1 REFERENCES REFERENCES NNP work_kv3srcrerrazfgb2arzc4pde5q 96 2 Arthur Arthur NNP work_kv3srcrerrazfgb2arzc4pde5q 96 3 L L NNP work_kv3srcrerrazfgb2arzc4pde5q 96 4 , , , work_kv3srcrerrazfgb2arzc4pde5q 96 5 Pavlovic Pavlovic NNP work_kv3srcrerrazfgb2arzc4pde5q 96 6 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 96 7 Djuranovic Djuranovic NNP work_kv3srcrerrazfgb2arzc4pde5q 96 8 S S NNP work_kv3srcrerrazfgb2arzc4pde5q 96 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 96 10 Smith Smith NNP work_kv3srcrerrazfgb2arzc4pde5q 96 11 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 96 12 Koutmou Koutmou NNP work_kv3srcrerrazfgb2arzc4pde5q 96 13 K K NNP work_kv3srcrerrazfgb2arzc4pde5q 96 14 , , , work_kv3srcrerrazfgb2arzc4pde5q 96 15 Green Green NNP work_kv3srcrerrazfgb2arzc4pde5q 96 16 R R NNP work_kv3srcrerrazfgb2arzc4pde5q 96 17 , , , work_kv3srcrerrazfgb2arzc4pde5q 96 18 Szczesny Szczesny NNP work_kv3srcrerrazfgb2arzc4pde5q 96 19 P P NNP work_kv3srcrerrazfgb2arzc4pde5q 96 20 , , , work_kv3srcrerrazfgb2arzc4pde5q 96 21 Djuranovic Djuranovic NNP work_kv3srcrerrazfgb2arzc4pde5q 96 22 S. S. NNP work_kv3srcrerrazfgb2arzc4pde5q 96 23 2015 2015 CD work_kv3srcrerrazfgb2arzc4pde5q 96 24 . . . work_kv3srcrerrazfgb2arzc4pde5q 97 1 Translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 97 2 control control NN work_kv3srcrerrazfgb2arzc4pde5q 97 3 by by IN work_kv3srcrerrazfgb2arzc4pde5q 97 4 lysine lysine NN work_kv3srcrerrazfgb2arzc4pde5q 97 5 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 97 6 encoding encode VBG work_kv3srcrerrazfgb2arzc4pde5q 97 7 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 97 8 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 97 9 rich rich JJ work_kv3srcrerrazfgb2arzc4pde5q 97 10 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 97 11 . . . work_kv3srcrerrazfgb2arzc4pde5q 98 1 Science Science NNP work_kv3srcrerrazfgb2arzc4pde5q 98 2 Advances Advances NNP work_kv3srcrerrazfgb2arzc4pde5q 98 3 1(6):e1500154 1(6):e1500154 CD work_kv3srcrerrazfgb2arzc4pde5q 98 4 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 98 5 10.1126 10.1126 CD work_kv3srcrerrazfgb2arzc4pde5q 98 6 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 98 7 sciadv.1500154 sciadv.1500154 NNP work_kv3srcrerrazfgb2arzc4pde5q 98 8 . . . work_kv3srcrerrazfgb2arzc4pde5q 99 1 Brandman Brandman NNP work_kv3srcrerrazfgb2arzc4pde5q 99 2 O O NNP work_kv3srcrerrazfgb2arzc4pde5q 99 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 4 Stewart Stewart NNP work_kv3srcrerrazfgb2arzc4pde5q 99 5 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 99 6 Ornstein Ornstein NNP work_kv3srcrerrazfgb2arzc4pde5q 99 7 J J NNP work_kv3srcrerrazfgb2arzc4pde5q 99 8 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 9 Wong Wong NNP work_kv3srcrerrazfgb2arzc4pde5q 99 10 D D NNP work_kv3srcrerrazfgb2arzc4pde5q 99 11 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 12 Larson Larson NNP work_kv3srcrerrazfgb2arzc4pde5q 99 13 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 99 14 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 15 Williams Williams NNP work_kv3srcrerrazfgb2arzc4pde5q 99 16 CC CC NNP work_kv3srcrerrazfgb2arzc4pde5q 99 17 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 18 Li Li NNP work_kv3srcrerrazfgb2arzc4pde5q 99 19 G G NNP work_kv3srcrerrazfgb2arzc4pde5q 99 20 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 99 21 W W NNP work_kv3srcrerrazfgb2arzc4pde5q 99 22 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 23 Zhou Zhou NNP work_kv3srcrerrazfgb2arzc4pde5q 99 24 S S NNP work_kv3srcrerrazfgb2arzc4pde5q 99 25 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 26 King King NNP work_kv3srcrerrazfgb2arzc4pde5q 99 27 D D NNP work_kv3srcrerrazfgb2arzc4pde5q 99 28 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 29 Shen Shen NNP work_kv3srcrerrazfgb2arzc4pde5q 99 30 PS PS NNP work_kv3srcrerrazfgb2arzc4pde5q 99 31 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 32 Weibezahn Weibezahn NNP work_kv3srcrerrazfgb2arzc4pde5q 99 33 J J NNP work_kv3srcrerrazfgb2arzc4pde5q 99 34 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 35 Dunn Dunn NNP work_kv3srcrerrazfgb2arzc4pde5q 99 36 JG JG NNP work_kv3srcrerrazfgb2arzc4pde5q 99 37 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 38 Rouskin Rouskin NNP work_kv3srcrerrazfgb2arzc4pde5q 99 39 S S NNP work_kv3srcrerrazfgb2arzc4pde5q 99 40 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 41 Inada Inada NNP work_kv3srcrerrazfgb2arzc4pde5q 99 42 T T NNP work_kv3srcrerrazfgb2arzc4pde5q 99 43 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 44 Frost Frost NNP work_kv3srcrerrazfgb2arzc4pde5q 99 45 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 99 46 , , , work_kv3srcrerrazfgb2arzc4pde5q 99 47 Weissman Weissman NNP work_kv3srcrerrazfgb2arzc4pde5q 99 48 JS JS NNP work_kv3srcrerrazfgb2arzc4pde5q 99 49 . . . work_kv3srcrerrazfgb2arzc4pde5q 100 1 2012 2012 CD work_kv3srcrerrazfgb2arzc4pde5q 100 2 . . . work_kv3srcrerrazfgb2arzc4pde5q 101 1 A a DT work_kv3srcrerrazfgb2arzc4pde5q 101 2 ribosome ribosome NN work_kv3srcrerrazfgb2arzc4pde5q 101 3 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 101 4 bound bind VBN work_kv3srcrerrazfgb2arzc4pde5q 101 5 quality quality NN work_kv3srcrerrazfgb2arzc4pde5q 101 6 control control NN work_kv3srcrerrazfgb2arzc4pde5q 101 7 complex complex NN work_kv3srcrerrazfgb2arzc4pde5q 101 8 triggers trigger VBZ work_kv3srcrerrazfgb2arzc4pde5q 101 9 degradation degradation NN work_kv3srcrerrazfgb2arzc4pde5q 101 10 of of IN work_kv3srcrerrazfgb2arzc4pde5q 101 11 nascent nascent JJ work_kv3srcrerrazfgb2arzc4pde5q 101 12 peptides peptide NNS work_kv3srcrerrazfgb2arzc4pde5q 101 13 and and CC work_kv3srcrerrazfgb2arzc4pde5q 101 14 signals signal VBZ work_kv3srcrerrazfgb2arzc4pde5q 101 15 translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 101 16 stress stress NN work_kv3srcrerrazfgb2arzc4pde5q 101 17 . . . work_kv3srcrerrazfgb2arzc4pde5q 102 1 Cell cell NN work_kv3srcrerrazfgb2arzc4pde5q 102 2 151:1042–1054 151:1042–1054 CD work_kv3srcrerrazfgb2arzc4pde5q 102 3 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 102 4 10.1016 10.1016 CD work_kv3srcrerrazfgb2arzc4pde5q 102 5 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 102 6 j.cell.2012.10.044 j.cell.2012.10.044 NN work_kv3srcrerrazfgb2arzc4pde5q 102 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 103 1 Chen Chen NNP work_kv3srcrerrazfgb2arzc4pde5q 103 2 J J NNP work_kv3srcrerrazfgb2arzc4pde5q 103 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 103 4 Petrov Petrov NNP work_kv3srcrerrazfgb2arzc4pde5q 103 5 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 103 6 , , , work_kv3srcrerrazfgb2arzc4pde5q 103 7 Johansson Johansson NNP work_kv3srcrerrazfgb2arzc4pde5q 103 8 M M NNP work_kv3srcrerrazfgb2arzc4pde5q 103 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 103 10 Tsai Tsai NNP work_kv3srcrerrazfgb2arzc4pde5q 103 11 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 103 12 , , , work_kv3srcrerrazfgb2arzc4pde5q 103 13 O’Leary O’Leary NNP work_kv3srcrerrazfgb2arzc4pde5q 103 14 SE SE NNP work_kv3srcrerrazfgb2arzc4pde5q 103 15 , , , work_kv3srcrerrazfgb2arzc4pde5q 103 16 Puglisi Puglisi NNP work_kv3srcrerrazfgb2arzc4pde5q 103 17 J. J. NNP work_kv3srcrerrazfgb2arzc4pde5q 104 1 2014 2014 CD work_kv3srcrerrazfgb2arzc4pde5q 104 2 . . . work_kv3srcrerrazfgb2arzc4pde5q 105 1 Dynamic dynamic JJ work_kv3srcrerrazfgb2arzc4pde5q 105 2 pathways pathway NNS work_kv3srcrerrazfgb2arzc4pde5q 105 3 of of IN work_kv3srcrerrazfgb2arzc4pde5q 105 4 −1 −1 NNP work_kv3srcrerrazfgb2arzc4pde5q 105 5 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 105 6 frameshifting frameshifting NN work_kv3srcrerrazfgb2arzc4pde5q 105 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 106 1 Nature nature NN work_kv3srcrerrazfgb2arzc4pde5q 106 2 512:328–332 512:328–332 CD work_kv3srcrerrazfgb2arzc4pde5q 106 3 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 106 4 10.1038 10.1038 CD work_kv3srcrerrazfgb2arzc4pde5q 106 5 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 106 6 nature13428 nature13428 NNP work_kv3srcrerrazfgb2arzc4pde5q 106 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 107 1 Cherry Cherry NNP work_kv3srcrerrazfgb2arzc4pde5q 107 2 JM JM NNP work_kv3srcrerrazfgb2arzc4pde5q 107 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 107 4 Adler Adler NNP work_kv3srcrerrazfgb2arzc4pde5q 107 5 C C NNP work_kv3srcrerrazfgb2arzc4pde5q 107 6 , , , work_kv3srcrerrazfgb2arzc4pde5q 107 7 Ball Ball NNP work_kv3srcrerrazfgb2arzc4pde5q 107 8 C C NNP work_kv3srcrerrazfgb2arzc4pde5q 107 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 107 10 Chervitz Chervitz NNP work_kv3srcrerrazfgb2arzc4pde5q 107 11 SA SA NNP work_kv3srcrerrazfgb2arzc4pde5q 107 12 , , , work_kv3srcrerrazfgb2arzc4pde5q 107 13 Dwight Dwight NNP work_kv3srcrerrazfgb2arzc4pde5q 107 14 SS SS NNP work_kv3srcrerrazfgb2arzc4pde5q 107 15 , , , work_kv3srcrerrazfgb2arzc4pde5q 107 16 Hester Hester NNP work_kv3srcrerrazfgb2arzc4pde5q 107 17 ET ET NNP work_kv3srcrerrazfgb2arzc4pde5q 107 18 , , , work_kv3srcrerrazfgb2arzc4pde5q 107 19 Jia Jia NNP work_kv3srcrerrazfgb2arzc4pde5q 107 20 Y Y NNP work_kv3srcrerrazfgb2arzc4pde5q 107 21 , , , work_kv3srcrerrazfgb2arzc4pde5q 107 22 Juvik Juvik NNP work_kv3srcrerrazfgb2arzc4pde5q 107 23 G G NNP work_kv3srcrerrazfgb2arzc4pde5q 107 24 , , , work_kv3srcrerrazfgb2arzc4pde5q 107 25 Roe Roe NNP work_kv3srcrerrazfgb2arzc4pde5q 107 26 T T NNP work_kv3srcrerrazfgb2arzc4pde5q 107 27 , , , work_kv3srcrerrazfgb2arzc4pde5q 107 28 Schroeder Schroeder NNP work_kv3srcrerrazfgb2arzc4pde5q 107 29 M M NNP work_kv3srcrerrazfgb2arzc4pde5q 107 30 , , , work_kv3srcrerrazfgb2arzc4pde5q 107 31 Weng Weng NNP work_kv3srcrerrazfgb2arzc4pde5q 107 32 S S NNP work_kv3srcrerrazfgb2arzc4pde5q 107 33 , , , work_kv3srcrerrazfgb2arzc4pde5q 107 34 Botstein Botstein NNP work_kv3srcrerrazfgb2arzc4pde5q 107 35 D. D. NNP work_kv3srcrerrazfgb2arzc4pde5q 107 36 1998 1998 CD work_kv3srcrerrazfgb2arzc4pde5q 107 37 . . . work_kv3srcrerrazfgb2arzc4pde5q 108 1 SGD SGD NNP work_kv3srcrerrazfgb2arzc4pde5q 108 2 : : : work_kv3srcrerrazfgb2arzc4pde5q 108 3 Saccharomyces saccharomyce NNS work_kv3srcrerrazfgb2arzc4pde5q 108 4 genome genome JJ work_kv3srcrerrazfgb2arzc4pde5q 108 5 database database NN work_kv3srcrerrazfgb2arzc4pde5q 108 6 . . . work_kv3srcrerrazfgb2arzc4pde5q 109 1 Nucleic Nucleic NNP work_kv3srcrerrazfgb2arzc4pde5q 109 2 Acids Acids NNPS work_kv3srcrerrazfgb2arzc4pde5q 109 3 Research Research NNP work_kv3srcrerrazfgb2arzc4pde5q 109 4 26:73–79 26:73–79 CD work_kv3srcrerrazfgb2arzc4pde5q 109 5 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 109 6 10.1093 10.1093 CD work_kv3srcrerrazfgb2arzc4pde5q 109 7 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 109 8 nar/26.1.73 nar/26.1.73 FW work_kv3srcrerrazfgb2arzc4pde5q 109 9 . . . work_kv3srcrerrazfgb2arzc4pde5q 110 1 Cruz Cruz NNP work_kv3srcrerrazfgb2arzc4pde5q 110 2 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 110 3 Vera Vera NNP work_kv3srcrerrazfgb2arzc4pde5q 110 4 LR LR NNP work_kv3srcrerrazfgb2arzc4pde5q 110 5 , , , work_kv3srcrerrazfgb2arzc4pde5q 110 6 Magos Magos NNP work_kv3srcrerrazfgb2arzc4pde5q 110 7 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 110 8 Castro Castro NNP work_kv3srcrerrazfgb2arzc4pde5q 110 9 MA MA NNP work_kv3srcrerrazfgb2arzc4pde5q 110 10 , , , work_kv3srcrerrazfgb2arzc4pde5q 110 11 Zamora Zamora NNP work_kv3srcrerrazfgb2arzc4pde5q 110 12 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 110 13 Romo Romo NNP work_kv3srcrerrazfgb2arzc4pde5q 110 14 E E NNP work_kv3srcrerrazfgb2arzc4pde5q 110 15 , , , work_kv3srcrerrazfgb2arzc4pde5q 110 16 Guarneros Guarneros NNP work_kv3srcrerrazfgb2arzc4pde5q 110 17 G. G. NNP work_kv3srcrerrazfgb2arzc4pde5q 110 18 2004 2004 CD work_kv3srcrerrazfgb2arzc4pde5q 110 19 . . . work_kv3srcrerrazfgb2arzc4pde5q 111 1 Ribosome Ribosome VBN work_kv3srcrerrazfgb2arzc4pde5q 111 2 stalling stalling NN work_kv3srcrerrazfgb2arzc4pde5q 111 3 and and CC work_kv3srcrerrazfgb2arzc4pde5q 111 4 peptidyl peptidyl JJ work_kv3srcrerrazfgb2arzc4pde5q 111 5 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 111 6 tRNA trna JJ work_kv3srcrerrazfgb2arzc4pde5q 111 7 drop drop NN work_kv3srcrerrazfgb2arzc4pde5q 111 8 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 111 9 off off NN work_kv3srcrerrazfgb2arzc4pde5q 111 10 during during IN work_kv3srcrerrazfgb2arzc4pde5q 111 11 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 111 12 delay delay NN work_kv3srcrerrazfgb2arzc4pde5q 111 13 at at IN work_kv3srcrerrazfgb2arzc4pde5q 111 14 AGA aga JJ work_kv3srcrerrazfgb2arzc4pde5q 111 15 codons codon NNS work_kv3srcrerrazfgb2arzc4pde5q 111 16 . . . work_kv3srcrerrazfgb2arzc4pde5q 112 1 Nucleic Nucleic NNP work_kv3srcrerrazfgb2arzc4pde5q 112 2 Acids Acids NNPS work_kv3srcrerrazfgb2arzc4pde5q 112 3 Research Research NNP work_kv3srcrerrazfgb2arzc4pde5q 112 4 32:4462–4468 32:4462–4468 NNP work_kv3srcrerrazfgb2arzc4pde5q 112 5 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 112 6 10.1093 10.1093 NNP work_kv3srcrerrazfgb2arzc4pde5q 112 7 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 112 8 nar nar NNP work_kv3srcrerrazfgb2arzc4pde5q 112 9 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 112 10 gkh784 gkh784 NNP work_kv3srcrerrazfgb2arzc4pde5q 112 11 . . . work_kv3srcrerrazfgb2arzc4pde5q 113 1 Dimitrova Dimitrova NNP work_kv3srcrerrazfgb2arzc4pde5q 113 2 LN LN NNP work_kv3srcrerrazfgb2arzc4pde5q 113 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 113 4 Kuroha Kuroha NNP work_kv3srcrerrazfgb2arzc4pde5q 113 5 K K NNP work_kv3srcrerrazfgb2arzc4pde5q 113 6 , , , work_kv3srcrerrazfgb2arzc4pde5q 113 7 Tatematsu Tatematsu NNP work_kv3srcrerrazfgb2arzc4pde5q 113 8 T T NNP work_kv3srcrerrazfgb2arzc4pde5q 113 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 113 10 Inada Inada NNP work_kv3srcrerrazfgb2arzc4pde5q 113 11 T. T. NNP work_kv3srcrerrazfgb2arzc4pde5q 113 12 2009 2009 CD work_kv3srcrerrazfgb2arzc4pde5q 113 13 . . . work_kv3srcrerrazfgb2arzc4pde5q 114 1 Nascent nascent JJ work_kv3srcrerrazfgb2arzc4pde5q 114 2 peptide peptide NN work_kv3srcrerrazfgb2arzc4pde5q 114 3 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 114 4 dependent dependent JJ work_kv3srcrerrazfgb2arzc4pde5q 114 5 translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 114 6 arrest arrest NN work_kv3srcrerrazfgb2arzc4pde5q 114 7 leads lead VBZ work_kv3srcrerrazfgb2arzc4pde5q 114 8 to to IN work_kv3srcrerrazfgb2arzc4pde5q 114 9 Not4p not4p NN work_kv3srcrerrazfgb2arzc4pde5q 114 10 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 114 11 mediated mediate VBN work_kv3srcrerrazfgb2arzc4pde5q 114 12 protein protein NN work_kv3srcrerrazfgb2arzc4pde5q 114 13 degradation degradation NN work_kv3srcrerrazfgb2arzc4pde5q 114 14 by by IN work_kv3srcrerrazfgb2arzc4pde5q 114 15 the the DT work_kv3srcrerrazfgb2arzc4pde5q 114 16 proteasome proteasome NN work_kv3srcrerrazfgb2arzc4pde5q 114 17 . . . work_kv3srcrerrazfgb2arzc4pde5q 115 1 The the DT work_kv3srcrerrazfgb2arzc4pde5q 115 2 Journal Journal NNP work_kv3srcrerrazfgb2arzc4pde5q 115 3 of of IN work_kv3srcrerrazfgb2arzc4pde5q 115 4 Biological Biological NNP work_kv3srcrerrazfgb2arzc4pde5q 115 5 Chemistry Chemistry NNP work_kv3srcrerrazfgb2arzc4pde5q 115 6 284:10343–10352 284:10343–10352 CD work_kv3srcrerrazfgb2arzc4pde5q 115 7 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 115 8 10.1074 10.1074 CD work_kv3srcrerrazfgb2arzc4pde5q 115 9 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 115 10 jbc jbc NNP work_kv3srcrerrazfgb2arzc4pde5q 115 11 . . . work_kv3srcrerrazfgb2arzc4pde5q 115 12 M808840200 M808840200 NNP work_kv3srcrerrazfgb2arzc4pde5q 115 13 . . . work_kv3srcrerrazfgb2arzc4pde5q 116 1 Doma Doma NNP work_kv3srcrerrazfgb2arzc4pde5q 116 2 MK MK NNP work_kv3srcrerrazfgb2arzc4pde5q 116 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 116 4 Parker Parker NNP work_kv3srcrerrazfgb2arzc4pde5q 116 5 R. R. NNP work_kv3srcrerrazfgb2arzc4pde5q 116 6 2006 2006 CD work_kv3srcrerrazfgb2arzc4pde5q 116 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 117 1 Endonucleolytic endonucleolytic JJ work_kv3srcrerrazfgb2arzc4pde5q 117 2 cleavage cleavage NN work_kv3srcrerrazfgb2arzc4pde5q 117 3 of of IN work_kv3srcrerrazfgb2arzc4pde5q 117 4 eukaryotic eukaryotic JJ work_kv3srcrerrazfgb2arzc4pde5q 117 5 mRNAs mRNAs '' work_kv3srcrerrazfgb2arzc4pde5q 117 6 with with IN work_kv3srcrerrazfgb2arzc4pde5q 117 7 stalls stall NNS work_kv3srcrerrazfgb2arzc4pde5q 117 8 in in IN work_kv3srcrerrazfgb2arzc4pde5q 117 9 translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 117 10 elongation elongation NN work_kv3srcrerrazfgb2arzc4pde5q 117 11 . . . work_kv3srcrerrazfgb2arzc4pde5q 118 1 Nature nature NN work_kv3srcrerrazfgb2arzc4pde5q 118 2 440:561–564 440:561–564 CD work_kv3srcrerrazfgb2arzc4pde5q 118 3 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 118 4 10.1038 10.1038 CD work_kv3srcrerrazfgb2arzc4pde5q 118 5 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 118 6 nature04530 nature04530 NNP work_kv3srcrerrazfgb2arzc4pde5q 118 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 119 1 Flicek Flicek NNP work_kv3srcrerrazfgb2arzc4pde5q 119 2 P P NNP work_kv3srcrerrazfgb2arzc4pde5q 119 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 4 Amode Amode NNP work_kv3srcrerrazfgb2arzc4pde5q 119 5 MR MR NNP work_kv3srcrerrazfgb2arzc4pde5q 119 6 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 7 Barrell Barrell NNP work_kv3srcrerrazfgb2arzc4pde5q 119 8 D D NNP work_kv3srcrerrazfgb2arzc4pde5q 119 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 10 Beal Beal NNP work_kv3srcrerrazfgb2arzc4pde5q 119 11 K K NNP work_kv3srcrerrazfgb2arzc4pde5q 119 12 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 13 Billis Billis NNP work_kv3srcrerrazfgb2arzc4pde5q 119 14 K K NNP work_kv3srcrerrazfgb2arzc4pde5q 119 15 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 16 Brent Brent NNP work_kv3srcrerrazfgb2arzc4pde5q 119 17 S S NNP work_kv3srcrerrazfgb2arzc4pde5q 119 18 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 19 Carvalho Carvalho NNP work_kv3srcrerrazfgb2arzc4pde5q 119 20 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 119 21 Silva Silva NNP work_kv3srcrerrazfgb2arzc4pde5q 119 22 D D NNP work_kv3srcrerrazfgb2arzc4pde5q 119 23 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 24 Clapham Clapham NNP work_kv3srcrerrazfgb2arzc4pde5q 119 25 P P NNP work_kv3srcrerrazfgb2arzc4pde5q 119 26 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 27 Coates Coates NNP work_kv3srcrerrazfgb2arzc4pde5q 119 28 G g NN work_kv3srcrerrazfgb2arzc4pde5q 119 29 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 30 Fitzgerald Fitzgerald NNP work_kv3srcrerrazfgb2arzc4pde5q 119 31 S S NNP work_kv3srcrerrazfgb2arzc4pde5q 119 32 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 33 Gil Gil NNP work_kv3srcrerrazfgb2arzc4pde5q 119 34 L L NNP work_kv3srcrerrazfgb2arzc4pde5q 119 35 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 36 Girón Girón NNP work_kv3srcrerrazfgb2arzc4pde5q 119 37 CG CG NNP work_kv3srcrerrazfgb2arzc4pde5q 119 38 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 39 Gordon Gordon NNP work_kv3srcrerrazfgb2arzc4pde5q 119 40 L L NNP work_kv3srcrerrazfgb2arzc4pde5q 119 41 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 42 Hourlier Hourlier NNP work_kv3srcrerrazfgb2arzc4pde5q 119 43 T T NNP work_kv3srcrerrazfgb2arzc4pde5q 119 44 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 45 Hunt Hunt NNP work_kv3srcrerrazfgb2arzc4pde5q 119 46 S S NNP work_kv3srcrerrazfgb2arzc4pde5q 119 47 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 48 Johnson Johnson NNP work_kv3srcrerrazfgb2arzc4pde5q 119 49 N N NNP work_kv3srcrerrazfgb2arzc4pde5q 119 50 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 51 Juettemann Juettemann NNP work_kv3srcrerrazfgb2arzc4pde5q 119 52 T T NNP work_kv3srcrerrazfgb2arzc4pde5q 119 53 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 54 Kähäri kähäri NN work_kv3srcrerrazfgb2arzc4pde5q 119 55 AK AK NNP work_kv3srcrerrazfgb2arzc4pde5q 119 56 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 57 Keenan Keenan NNP work_kv3srcrerrazfgb2arzc4pde5q 119 58 S S NNP work_kv3srcrerrazfgb2arzc4pde5q 119 59 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 60 Kulesha Kulesha NNP work_kv3srcrerrazfgb2arzc4pde5q 119 61 E E NNP work_kv3srcrerrazfgb2arzc4pde5q 119 62 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 63 Martin Martin NNP work_kv3srcrerrazfgb2arzc4pde5q 119 64 FJ FJ NNP work_kv3srcrerrazfgb2arzc4pde5q 119 65 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 66 Maurel Maurel NNP work_kv3srcrerrazfgb2arzc4pde5q 119 67 T T NNP work_kv3srcrerrazfgb2arzc4pde5q 119 68 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 69 McLaren McLaren NNP work_kv3srcrerrazfgb2arzc4pde5q 119 70 WM WM NNP work_kv3srcrerrazfgb2arzc4pde5q 119 71 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 72 Murphy Murphy NNP work_kv3srcrerrazfgb2arzc4pde5q 119 73 DN DN NNP work_kv3srcrerrazfgb2arzc4pde5q 119 74 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 75 Nag Nag NNP work_kv3srcrerrazfgb2arzc4pde5q 119 76 R R NNP work_kv3srcrerrazfgb2arzc4pde5q 119 77 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 78 Overduin Overduin NNP work_kv3srcrerrazfgb2arzc4pde5q 119 79 B B NNP work_kv3srcrerrazfgb2arzc4pde5q 119 80 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 81 Pignatelli Pignatelli NNP work_kv3srcrerrazfgb2arzc4pde5q 119 82 M M NNP work_kv3srcrerrazfgb2arzc4pde5q 119 83 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 84 Pritchard Pritchard NNP work_kv3srcrerrazfgb2arzc4pde5q 119 85 B B NNP work_kv3srcrerrazfgb2arzc4pde5q 119 86 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 87 Pritchard Pritchard NNP work_kv3srcrerrazfgb2arzc4pde5q 119 88 E E NNP work_kv3srcrerrazfgb2arzc4pde5q 119 89 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 90 Riat Riat NNP work_kv3srcrerrazfgb2arzc4pde5q 119 91 HS HS NNP work_kv3srcrerrazfgb2arzc4pde5q 119 92 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 93 Ruffier Ruffier NNP work_kv3srcrerrazfgb2arzc4pde5q 119 94 M M NNP work_kv3srcrerrazfgb2arzc4pde5q 119 95 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 96 Sheppard Sheppard NNP work_kv3srcrerrazfgb2arzc4pde5q 119 97 D D NNP work_kv3srcrerrazfgb2arzc4pde5q 119 98 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 99 Taylor Taylor NNP work_kv3srcrerrazfgb2arzc4pde5q 119 100 K K NNP work_kv3srcrerrazfgb2arzc4pde5q 119 101 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 102 Thormann Thormann NNP work_kv3srcrerrazfgb2arzc4pde5q 119 103 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 119 104 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 105 Trevanion Trevanion NNP work_kv3srcrerrazfgb2arzc4pde5q 119 106 SJ SJ NNP work_kv3srcrerrazfgb2arzc4pde5q 119 107 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 108 Vullo Vullo NNP work_kv3srcrerrazfgb2arzc4pde5q 119 109 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 119 110 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 111 Wilder Wilder NNP work_kv3srcrerrazfgb2arzc4pde5q 119 112 SP SP NNP work_kv3srcrerrazfgb2arzc4pde5q 119 113 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 114 Wilson Wilson NNP work_kv3srcrerrazfgb2arzc4pde5q 119 115 M M NNP work_kv3srcrerrazfgb2arzc4pde5q 119 116 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 117 Zadissa Zadissa NNP work_kv3srcrerrazfgb2arzc4pde5q 119 118 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 119 119 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 120 Aken Aken NNP work_kv3srcrerrazfgb2arzc4pde5q 119 121 BL BL NNP work_kv3srcrerrazfgb2arzc4pde5q 119 122 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 123 Birney Birney NNP work_kv3srcrerrazfgb2arzc4pde5q 119 124 E E NNP work_kv3srcrerrazfgb2arzc4pde5q 119 125 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 126 Cunningham Cunningham NNP work_kv3srcrerrazfgb2arzc4pde5q 119 127 F F NNP work_kv3srcrerrazfgb2arzc4pde5q 119 128 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 129 Harrow Harrow NNP work_kv3srcrerrazfgb2arzc4pde5q 119 130 J J NNP work_kv3srcrerrazfgb2arzc4pde5q 119 131 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 132 Herrero Herrero NNP work_kv3srcrerrazfgb2arzc4pde5q 119 133 J J NNP work_kv3srcrerrazfgb2arzc4pde5q 119 134 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 135 Hubbard Hubbard NNP work_kv3srcrerrazfgb2arzc4pde5q 119 136 TJP TJP NNP work_kv3srcrerrazfgb2arzc4pde5q 119 137 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 138 Kinsella Kinsella NNP work_kv3srcrerrazfgb2arzc4pde5q 119 139 R R NNP work_kv3srcrerrazfgb2arzc4pde5q 119 140 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 141 Muffato Muffato NNP work_kv3srcrerrazfgb2arzc4pde5q 119 142 M M NNP work_kv3srcrerrazfgb2arzc4pde5q 119 143 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 144 Parker Parker NNP work_kv3srcrerrazfgb2arzc4pde5q 119 145 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 119 146 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 147 Spudich Spudich NNP work_kv3srcrerrazfgb2arzc4pde5q 119 148 G G NNP work_kv3srcrerrazfgb2arzc4pde5q 119 149 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 150 Yates Yates NNP work_kv3srcrerrazfgb2arzc4pde5q 119 151 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 119 152 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 153 Zerbino Zerbino NNP work_kv3srcrerrazfgb2arzc4pde5q 119 154 DR DR NNP work_kv3srcrerrazfgb2arzc4pde5q 119 155 , , , work_kv3srcrerrazfgb2arzc4pde5q 119 156 Searle Searle NNP work_kv3srcrerrazfgb2arzc4pde5q 119 157 SMJ SMJ NNP work_kv3srcrerrazfgb2arzc4pde5q 119 158 . . . work_kv3srcrerrazfgb2arzc4pde5q 120 1 2014 2014 CD work_kv3srcrerrazfgb2arzc4pde5q 120 2 . . . work_kv3srcrerrazfgb2arzc4pde5q 121 1 Ensembl Ensembl NNP work_kv3srcrerrazfgb2arzc4pde5q 121 2 . . . work_kv3srcrerrazfgb2arzc4pde5q 122 1 Nucleic Nucleic NNP work_kv3srcrerrazfgb2arzc4pde5q 122 2 Acids Acids NNPS work_kv3srcrerrazfgb2arzc4pde5q 122 3 Research Research NNP work_kv3srcrerrazfgb2arzc4pde5q 122 4 42 42 CD work_kv3srcrerrazfgb2arzc4pde5q 122 5 : : : work_kv3srcrerrazfgb2arzc4pde5q 122 6 D749–D755 D749–D755 NNP work_kv3srcrerrazfgb2arzc4pde5q 122 7 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 122 8 10.1093 10.1093 NNP work_kv3srcrerrazfgb2arzc4pde5q 122 9 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 122 10 nar nar NNP work_kv3srcrerrazfgb2arzc4pde5q 122 11 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 122 12 gkt1196 gkt1196 VB work_kv3srcrerrazfgb2arzc4pde5q 122 13 . . . work_kv3srcrerrazfgb2arzc4pde5q 123 1 Koutmou Koutmou NNP work_kv3srcrerrazfgb2arzc4pde5q 123 2 KS KS NNP work_kv3srcrerrazfgb2arzc4pde5q 123 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 123 4 Schuller Schuller NNP work_kv3srcrerrazfgb2arzc4pde5q 123 5 AP AP NNP work_kv3srcrerrazfgb2arzc4pde5q 123 6 , , , work_kv3srcrerrazfgb2arzc4pde5q 123 7 Brunelle Brunelle NNP work_kv3srcrerrazfgb2arzc4pde5q 123 8 JL JL NNP work_kv3srcrerrazfgb2arzc4pde5q 123 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 123 10 Radhakrishnan Radhakrishnan NNP work_kv3srcrerrazfgb2arzc4pde5q 123 11 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 123 12 , , , work_kv3srcrerrazfgb2arzc4pde5q 123 13 Djuranovic Djuranovic NNP work_kv3srcrerrazfgb2arzc4pde5q 123 14 S S NNP work_kv3srcrerrazfgb2arzc4pde5q 123 15 , , , work_kv3srcrerrazfgb2arzc4pde5q 123 16 Green Green NNP work_kv3srcrerrazfgb2arzc4pde5q 123 17 R. R. NNP work_kv3srcrerrazfgb2arzc4pde5q 123 18 2015 2015 CD work_kv3srcrerrazfgb2arzc4pde5q 123 19 . . . work_kv3srcrerrazfgb2arzc4pde5q 124 1 Ribosomes ribosome NNS work_kv3srcrerrazfgb2arzc4pde5q 124 2 slide slide VBP work_kv3srcrerrazfgb2arzc4pde5q 124 3 on on IN work_kv3srcrerrazfgb2arzc4pde5q 124 4 lysine lysine NN work_kv3srcrerrazfgb2arzc4pde5q 124 5 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 124 6 encoding encoding NN work_kv3srcrerrazfgb2arzc4pde5q 124 7 homopolymeric homopolymeric JJ work_kv3srcrerrazfgb2arzc4pde5q 124 8 A a DT work_kv3srcrerrazfgb2arzc4pde5q 124 9 stretches stretch NNS work_kv3srcrerrazfgb2arzc4pde5q 124 10 . . . work_kv3srcrerrazfgb2arzc4pde5q 125 1 eLife elife NN work_kv3srcrerrazfgb2arzc4pde5q 125 2 4 4 CD work_kv3srcrerrazfgb2arzc4pde5q 125 3 : : : work_kv3srcrerrazfgb2arzc4pde5q 125 4 e05534 e05534 JJ work_kv3srcrerrazfgb2arzc4pde5q 125 5 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 125 6 10.7554 10.7554 CD work_kv3srcrerrazfgb2arzc4pde5q 125 7 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 125 8 eLife.05534 eLife.05534 NNP work_kv3srcrerrazfgb2arzc4pde5q 125 9 . . . work_kv3srcrerrazfgb2arzc4pde5q 126 1 Kuroha Kuroha NNP work_kv3srcrerrazfgb2arzc4pde5q 126 2 K K NNP work_kv3srcrerrazfgb2arzc4pde5q 126 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 126 4 Akamatsu Akamatsu NNP work_kv3srcrerrazfgb2arzc4pde5q 126 5 M M NNP work_kv3srcrerrazfgb2arzc4pde5q 126 6 , , , work_kv3srcrerrazfgb2arzc4pde5q 126 7 Dimitrova Dimitrova NNP work_kv3srcrerrazfgb2arzc4pde5q 126 8 L L NNP work_kv3srcrerrazfgb2arzc4pde5q 126 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 126 10 Ito Ito NNP work_kv3srcrerrazfgb2arzc4pde5q 126 11 T T NNP work_kv3srcrerrazfgb2arzc4pde5q 126 12 , , , work_kv3srcrerrazfgb2arzc4pde5q 126 13 Kato Kato NNP work_kv3srcrerrazfgb2arzc4pde5q 126 14 Y Y NNP work_kv3srcrerrazfgb2arzc4pde5q 126 15 , , , work_kv3srcrerrazfgb2arzc4pde5q 126 16 Shirahige Shirahige NNP work_kv3srcrerrazfgb2arzc4pde5q 126 17 K K NNP work_kv3srcrerrazfgb2arzc4pde5q 126 18 , , , work_kv3srcrerrazfgb2arzc4pde5q 126 19 Inada Inada NNP work_kv3srcrerrazfgb2arzc4pde5q 126 20 T. T. NNP work_kv3srcrerrazfgb2arzc4pde5q 126 21 2010 2010 CD work_kv3srcrerrazfgb2arzc4pde5q 126 22 . . . work_kv3srcrerrazfgb2arzc4pde5q 127 1 Receptor receptor NN work_kv3srcrerrazfgb2arzc4pde5q 127 2 for for IN work_kv3srcrerrazfgb2arzc4pde5q 127 3 activated activate VBN work_kv3srcrerrazfgb2arzc4pde5q 127 4 C c NN work_kv3srcrerrazfgb2arzc4pde5q 127 5 kinase kinase VBD work_kv3srcrerrazfgb2arzc4pde5q 127 6 1 1 CD work_kv3srcrerrazfgb2arzc4pde5q 127 7 stimulates stimulate VBZ work_kv3srcrerrazfgb2arzc4pde5q 127 8 nascent nascent JJ work_kv3srcrerrazfgb2arzc4pde5q 127 9 polypeptide polypeptide NN work_kv3srcrerrazfgb2arzc4pde5q 127 10 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 127 11 dependent dependent JJ work_kv3srcrerrazfgb2arzc4pde5q 127 12 translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 127 13 arrest arrest NN work_kv3srcrerrazfgb2arzc4pde5q 127 14 . . . work_kv3srcrerrazfgb2arzc4pde5q 128 1 EMBO EMBO NNP work_kv3srcrerrazfgb2arzc4pde5q 128 2 Reports report VBZ work_kv3srcrerrazfgb2arzc4pde5q 128 3 11:956–961 11:956–961 CD work_kv3srcrerrazfgb2arzc4pde5q 128 4 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 128 5 10.1038 10.1038 CD work_kv3srcrerrazfgb2arzc4pde5q 128 6 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 128 7 embor.2010.169 embor.2010.169 CD work_kv3srcrerrazfgb2arzc4pde5q 128 8 . . . work_kv3srcrerrazfgb2arzc4pde5q 129 1 Letzring letzre VBG work_kv3srcrerrazfgb2arzc4pde5q 129 2 DP DP NNP work_kv3srcrerrazfgb2arzc4pde5q 129 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 129 4 Dean Dean NNP work_kv3srcrerrazfgb2arzc4pde5q 129 5 KM KM NNP work_kv3srcrerrazfgb2arzc4pde5q 129 6 , , , work_kv3srcrerrazfgb2arzc4pde5q 129 7 Grayhack Grayhack NNP work_kv3srcrerrazfgb2arzc4pde5q 129 8 EJ EJ NNP work_kv3srcrerrazfgb2arzc4pde5q 129 9 . . . work_kv3srcrerrazfgb2arzc4pde5q 130 1 2010 2010 CD work_kv3srcrerrazfgb2arzc4pde5q 130 2 . . . work_kv3srcrerrazfgb2arzc4pde5q 131 1 Control control NN work_kv3srcrerrazfgb2arzc4pde5q 131 2 of of IN work_kv3srcrerrazfgb2arzc4pde5q 131 3 translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 131 4 efficiency efficiency NN work_kv3srcrerrazfgb2arzc4pde5q 131 5 in in IN work_kv3srcrerrazfgb2arzc4pde5q 131 6 yeast yeast NN work_kv3srcrerrazfgb2arzc4pde5q 131 7 by by IN work_kv3srcrerrazfgb2arzc4pde5q 131 8 codon codon NNP work_kv3srcrerrazfgb2arzc4pde5q 131 9 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 131 10 anticodon anticodon NNP work_kv3srcrerrazfgb2arzc4pde5q 131 11 interactions interaction NNS work_kv3srcrerrazfgb2arzc4pde5q 131 12 . . . work_kv3srcrerrazfgb2arzc4pde5q 132 1 RNA RNA NNP work_kv3srcrerrazfgb2arzc4pde5q 132 2 16:2516–2528 16:2516–2528 CD work_kv3srcrerrazfgb2arzc4pde5q 132 3 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 132 4 10.1261 10.1261 CD work_kv3srcrerrazfgb2arzc4pde5q 132 5 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 132 6 rna.2411710 rna.2411710 NN work_kv3srcrerrazfgb2arzc4pde5q 132 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 133 1 Pruitt Pruitt NNP work_kv3srcrerrazfgb2arzc4pde5q 133 2 KD KD NNP work_kv3srcrerrazfgb2arzc4pde5q 133 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 4 Brown Brown NNP work_kv3srcrerrazfgb2arzc4pde5q 133 5 GR GR NNP work_kv3srcrerrazfgb2arzc4pde5q 133 6 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 7 Hiatt Hiatt NNP work_kv3srcrerrazfgb2arzc4pde5q 133 8 SM SM NNP work_kv3srcrerrazfgb2arzc4pde5q 133 9 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 10 Thibaud Thibaud NNP work_kv3srcrerrazfgb2arzc4pde5q 133 11 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 133 12 Nissen Nissen NNP work_kv3srcrerrazfgb2arzc4pde5q 133 13 F F NNP work_kv3srcrerrazfgb2arzc4pde5q 133 14 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 15 Astashyn Astashyn NNP work_kv3srcrerrazfgb2arzc4pde5q 133 16 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 133 17 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 18 Ermolaeva Ermolaeva NNP work_kv3srcrerrazfgb2arzc4pde5q 133 19 O O NNP work_kv3srcrerrazfgb2arzc4pde5q 133 20 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 21 Farrell Farrell NNP work_kv3srcrerrazfgb2arzc4pde5q 133 22 CM CM NNP work_kv3srcrerrazfgb2arzc4pde5q 133 23 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 24 Hart Hart NNP work_kv3srcrerrazfgb2arzc4pde5q 133 25 J J NNP work_kv3srcrerrazfgb2arzc4pde5q 133 26 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 27 Landrum Landrum NNP work_kv3srcrerrazfgb2arzc4pde5q 133 28 MJ MJ NNP work_kv3srcrerrazfgb2arzc4pde5q 133 29 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 30 McGarvey McGarvey NNP work_kv3srcrerrazfgb2arzc4pde5q 133 31 KM KM NNP work_kv3srcrerrazfgb2arzc4pde5q 133 32 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 33 Murphy Murphy NNP work_kv3srcrerrazfgb2arzc4pde5q 133 34 MR MR NNP work_kv3srcrerrazfgb2arzc4pde5q 133 35 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 36 O’Leary O’Leary NNP work_kv3srcrerrazfgb2arzc4pde5q 133 37 NA NA NNP work_kv3srcrerrazfgb2arzc4pde5q 133 38 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 39 Pujar Pujar NNP work_kv3srcrerrazfgb2arzc4pde5q 133 40 S S NNP work_kv3srcrerrazfgb2arzc4pde5q 133 41 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 42 Rajput Rajput NNP work_kv3srcrerrazfgb2arzc4pde5q 133 43 B B NNP work_kv3srcrerrazfgb2arzc4pde5q 133 44 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 45 Rangwala Rangwala NNP work_kv3srcrerrazfgb2arzc4pde5q 133 46 SH SH NNP work_kv3srcrerrazfgb2arzc4pde5q 133 47 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 48 Riddick Riddick NNP work_kv3srcrerrazfgb2arzc4pde5q 133 49 LD LD NNP work_kv3srcrerrazfgb2arzc4pde5q 133 50 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 51 Shkeda Shkeda NNP work_kv3srcrerrazfgb2arzc4pde5q 133 52 A A NNP work_kv3srcrerrazfgb2arzc4pde5q 133 53 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 54 Sun Sun NNP work_kv3srcrerrazfgb2arzc4pde5q 133 55 H H NNP work_kv3srcrerrazfgb2arzc4pde5q 133 56 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 57 Tamez Tamez NNP work_kv3srcrerrazfgb2arzc4pde5q 133 58 P P NNP work_kv3srcrerrazfgb2arzc4pde5q 133 59 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 60 Tully Tully NNP work_kv3srcrerrazfgb2arzc4pde5q 133 61 RE RE NNP work_kv3srcrerrazfgb2arzc4pde5q 133 62 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 63 Wallin Wallin NNP work_kv3srcrerrazfgb2arzc4pde5q 133 64 C C NNP work_kv3srcrerrazfgb2arzc4pde5q 133 65 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 66 Webb Webb NNP work_kv3srcrerrazfgb2arzc4pde5q 133 67 D D NNP work_kv3srcrerrazfgb2arzc4pde5q 133 68 , , , work_kv3srcrerrazfgb2arzc4pde5q 133 69 Habich Habich NNP work_kv3srcrerrazfgb2arzc4pde5q 133 70 et et NNP work_kv3srcrerrazfgb2arzc4pde5q 133 71 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 133 72 . . . work_kv3srcrerrazfgb2arzc4pde5q 134 1 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 134 2 2016 2016 CD work_kv3srcrerrazfgb2arzc4pde5q 134 3 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 134 4 , , , work_kv3srcrerrazfgb2arzc4pde5q 134 5 PeerJ PeerJ NNP work_kv3srcrerrazfgb2arzc4pde5q 134 6 Comput Comput NNP work_kv3srcrerrazfgb2arzc4pde5q 134 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 135 1 Sci Sci NNP work_kv3srcrerrazfgb2arzc4pde5q 135 2 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 135 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 135 4 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 135 5 10.7717 10.7717 CD work_kv3srcrerrazfgb2arzc4pde5q 135 6 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 135 7 peerj peerj NNP work_kv3srcrerrazfgb2arzc4pde5q 135 8 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 135 9 cs.45 cs.45 NNP work_kv3srcrerrazfgb2arzc4pde5q 135 10 6/7 6/7 CD work_kv3srcrerrazfgb2arzc4pde5q 135 11 https://peerj.com/computer-science/ https://peerj.com/computer-science/ CD work_kv3srcrerrazfgb2arzc4pde5q 135 12 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 13 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 14 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 15 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 16 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 17 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 18 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 19 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 20 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 21 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 22 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 23 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 24 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 25 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 26 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 27 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 28 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 29 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 30 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 31 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 32 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 33 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 34 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 35 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 36 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 37 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 38 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 39 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 40 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 41 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 42 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 43 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 44 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 45 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 46 https://github.com/habich/PATACSDB/ https://github.com/habich/PATACSDB/ NNP work_kv3srcrerrazfgb2arzc4pde5q 135 47 http://dx.doi.org/10.1126/sciadv.1500154 http://dx.doi.org/10.1126/sciadv.1500154 ADD work_kv3srcrerrazfgb2arzc4pde5q 135 48 http://dx.doi.org/10.1016/j.cell.2012.10.044 http://dx.doi.org/10.1016/j.cell.2012.10.044 FW work_kv3srcrerrazfgb2arzc4pde5q 135 49 http://dx.doi.org/10.1038/nature13428 http://dx.doi.org/10.1038/nature13428 NNP work_kv3srcrerrazfgb2arzc4pde5q 135 50 http://dx.doi.org/10.1093/nar/26.1.73 http://dx.doi.org/10.1093/nar/26.1.73 FW work_kv3srcrerrazfgb2arzc4pde5q 135 51 http://dx.doi.org/10.1093/nar/gkh784 http://dx.doi.org/10.1093/nar/gkh784 NNP work_kv3srcrerrazfgb2arzc4pde5q 135 52 http://dx.doi.org/10.1074/jbc.M808840200 http://dx.doi.org/10.1074/jbc.m808840200 NN work_kv3srcrerrazfgb2arzc4pde5q 135 53 http://dx.doi.org/10.1038/nature04530 http://dx.doi.org/10.1038/nature04530 NNP work_kv3srcrerrazfgb2arzc4pde5q 135 54 http://dx.doi.org/10.1093/nar/gkt1196 http://dx.doi.org/10.1093/nar/gkt1196 NNP work_kv3srcrerrazfgb2arzc4pde5q 135 55 http://dx.doi.org/10.7554/eLife.05534 http://dx.doi.org/10.7554/eLife.05534 NNP work_kv3srcrerrazfgb2arzc4pde5q 135 56 http://dx.doi.org/10.1038/embor.2010.169 http://dx.doi.org/10.1038/embor.2010.169 UH work_kv3srcrerrazfgb2arzc4pde5q 135 57 http://dx.doi.org/10.1261/rna.2411710 http://dx.doi.org/10.1261/rna.2411710 NN work_kv3srcrerrazfgb2arzc4pde5q 135 58 http://dx.doi.org/10.7717/peerj-cs.45 http://dx.doi.org/10.7717/peerj-cs.45 DT work_kv3srcrerrazfgb2arzc4pde5q 135 59 Weber Weber NNP work_kv3srcrerrazfgb2arzc4pde5q 135 60 J J NNP work_kv3srcrerrazfgb2arzc4pde5q 135 61 , , , work_kv3srcrerrazfgb2arzc4pde5q 135 62 Wu Wu NNP work_kv3srcrerrazfgb2arzc4pde5q 135 63 W W NNP work_kv3srcrerrazfgb2arzc4pde5q 135 64 , , , work_kv3srcrerrazfgb2arzc4pde5q 135 65 DiCuccio DiCuccio NNP work_kv3srcrerrazfgb2arzc4pde5q 135 66 M M NNP work_kv3srcrerrazfgb2arzc4pde5q 135 67 , , , work_kv3srcrerrazfgb2arzc4pde5q 135 68 Kitts Kitts NNP work_kv3srcrerrazfgb2arzc4pde5q 135 69 P P NNP work_kv3srcrerrazfgb2arzc4pde5q 135 70 , , , work_kv3srcrerrazfgb2arzc4pde5q 135 71 Maglott Maglott NNP work_kv3srcrerrazfgb2arzc4pde5q 135 72 DR DR NNP work_kv3srcrerrazfgb2arzc4pde5q 135 73 , , , work_kv3srcrerrazfgb2arzc4pde5q 135 74 Murphy Murphy NNP work_kv3srcrerrazfgb2arzc4pde5q 135 75 TD TD NNP work_kv3srcrerrazfgb2arzc4pde5q 135 76 , , , work_kv3srcrerrazfgb2arzc4pde5q 135 77 Ostell Ostell NNP work_kv3srcrerrazfgb2arzc4pde5q 135 78 JM JM NNP work_kv3srcrerrazfgb2arzc4pde5q 135 79 . . . work_kv3srcrerrazfgb2arzc4pde5q 136 1 2014 2014 CD work_kv3srcrerrazfgb2arzc4pde5q 136 2 . . . work_kv3srcrerrazfgb2arzc4pde5q 137 1 RefSeq refseq NN work_kv3srcrerrazfgb2arzc4pde5q 137 2 : : : work_kv3srcrerrazfgb2arzc4pde5q 137 3 an an DT work_kv3srcrerrazfgb2arzc4pde5q 137 4 update update NN work_kv3srcrerrazfgb2arzc4pde5q 137 5 on on IN work_kv3srcrerrazfgb2arzc4pde5q 137 6 mammalian mammalian JJ work_kv3srcrerrazfgb2arzc4pde5q 137 7 reference reference NN work_kv3srcrerrazfgb2arzc4pde5q 137 8 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 137 9 . . . work_kv3srcrerrazfgb2arzc4pde5q 138 1 Nucleic Nucleic NNP work_kv3srcrerrazfgb2arzc4pde5q 138 2 Acids Acids NNPS work_kv3srcrerrazfgb2arzc4pde5q 138 3 Research Research NNP work_kv3srcrerrazfgb2arzc4pde5q 138 4 42 42 CD work_kv3srcrerrazfgb2arzc4pde5q 138 5 : : : work_kv3srcrerrazfgb2arzc4pde5q 138 6 D756–D763 D756–D763 NNP work_kv3srcrerrazfgb2arzc4pde5q 138 7 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 138 8 10.1093 10.1093 NNP work_kv3srcrerrazfgb2arzc4pde5q 138 9 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 138 10 nar nar NNP work_kv3srcrerrazfgb2arzc4pde5q 138 11 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 138 12 gkt1114 gkt1114 NNP work_kv3srcrerrazfgb2arzc4pde5q 138 13 . . . work_kv3srcrerrazfgb2arzc4pde5q 139 1 Shoemaker Shoemaker NNP work_kv3srcrerrazfgb2arzc4pde5q 139 2 CJ CJ NNP work_kv3srcrerrazfgb2arzc4pde5q 139 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 139 4 Green Green NNP work_kv3srcrerrazfgb2arzc4pde5q 139 5 R. R. NNP work_kv3srcrerrazfgb2arzc4pde5q 139 6 2012 2012 CD work_kv3srcrerrazfgb2arzc4pde5q 139 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 140 1 Translation translation NN work_kv3srcrerrazfgb2arzc4pde5q 140 2 drives drive VBZ work_kv3srcrerrazfgb2arzc4pde5q 140 3 mRNA mrna IN work_kv3srcrerrazfgb2arzc4pde5q 140 4 quality quality NN work_kv3srcrerrazfgb2arzc4pde5q 140 5 control control NN work_kv3srcrerrazfgb2arzc4pde5q 140 6 . . . work_kv3srcrerrazfgb2arzc4pde5q 141 1 Nature Nature NNP work_kv3srcrerrazfgb2arzc4pde5q 141 2 Structural Structural NNP work_kv3srcrerrazfgb2arzc4pde5q 141 3 & & CC work_kv3srcrerrazfgb2arzc4pde5q 141 4 Molecular Molecular NNP work_kv3srcrerrazfgb2arzc4pde5q 141 5 Biology Biology NNP work_kv3srcrerrazfgb2arzc4pde5q 141 6 19:594–601 19:594–601 CD work_kv3srcrerrazfgb2arzc4pde5q 141 7 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 141 8 10.1038 10.1038 CD work_kv3srcrerrazfgb2arzc4pde5q 141 9 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 141 10 nsmb.2301 nsmb.2301 NN work_kv3srcrerrazfgb2arzc4pde5q 141 11 . . . work_kv3srcrerrazfgb2arzc4pde5q 142 1 Yan Yan NNP work_kv3srcrerrazfgb2arzc4pde5q 142 2 S S NNP work_kv3srcrerrazfgb2arzc4pde5q 142 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 142 4 Wen Wen NNP work_kv3srcrerrazfgb2arzc4pde5q 142 5 J J NNP work_kv3srcrerrazfgb2arzc4pde5q 142 6 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 142 7 D D NNP work_kv3srcrerrazfgb2arzc4pde5q 142 8 , , , work_kv3srcrerrazfgb2arzc4pde5q 142 9 Bustamante Bustamante NNP work_kv3srcrerrazfgb2arzc4pde5q 142 10 C C NNP work_kv3srcrerrazfgb2arzc4pde5q 142 11 , , , work_kv3srcrerrazfgb2arzc4pde5q 142 12 Tinoco Tinoco NNP work_kv3srcrerrazfgb2arzc4pde5q 142 13 Jr Jr NNP work_kv3srcrerrazfgb2arzc4pde5q 142 14 I. I. NNP work_kv3srcrerrazfgb2arzc4pde5q 143 1 2015 2015 CD work_kv3srcrerrazfgb2arzc4pde5q 143 2 . . . work_kv3srcrerrazfgb2arzc4pde5q 144 1 Ribosome ribosome JJ work_kv3srcrerrazfgb2arzc4pde5q 144 2 excursions excursion NNS work_kv3srcrerrazfgb2arzc4pde5q 144 3 during during IN work_kv3srcrerrazfgb2arzc4pde5q 144 4 mRNA mRNA NNP work_kv3srcrerrazfgb2arzc4pde5q 144 5 translocation translocation NNP work_kv3srcrerrazfgb2arzc4pde5q 144 6 mediate mediate VBP work_kv3srcrerrazfgb2arzc4pde5q 144 7 broad broad JJ work_kv3srcrerrazfgb2arzc4pde5q 144 8 branching branching NN work_kv3srcrerrazfgb2arzc4pde5q 144 9 of of IN work_kv3srcrerrazfgb2arzc4pde5q 144 10 frameshift frameshift NN work_kv3srcrerrazfgb2arzc4pde5q 144 11 pathways pathway NNS work_kv3srcrerrazfgb2arzc4pde5q 144 12 . . . work_kv3srcrerrazfgb2arzc4pde5q 145 1 Cell cell NN work_kv3srcrerrazfgb2arzc4pde5q 145 2 160:870–881 160:870–881 CD work_kv3srcrerrazfgb2arzc4pde5q 145 3 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 145 4 10.1016 10.1016 CD work_kv3srcrerrazfgb2arzc4pde5q 145 5 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 145 6 j.cell.2015.02.003 j.cell.2015.02.003 NN work_kv3srcrerrazfgb2arzc4pde5q 145 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 146 1 Habich Habich NNP work_kv3srcrerrazfgb2arzc4pde5q 146 2 et et FW work_kv3srcrerrazfgb2arzc4pde5q 146 3 al al NNP work_kv3srcrerrazfgb2arzc4pde5q 146 4 . . . work_kv3srcrerrazfgb2arzc4pde5q 147 1 ( ( -LRB- work_kv3srcrerrazfgb2arzc4pde5q 147 2 2016 2016 CD work_kv3srcrerrazfgb2arzc4pde5q 147 3 ) ) -RRB- work_kv3srcrerrazfgb2arzc4pde5q 147 4 , , , work_kv3srcrerrazfgb2arzc4pde5q 147 5 PeerJ PeerJ NNP work_kv3srcrerrazfgb2arzc4pde5q 147 6 Comput Comput NNP work_kv3srcrerrazfgb2arzc4pde5q 147 7 . . . work_kv3srcrerrazfgb2arzc4pde5q 148 1 Sci Sci NNP work_kv3srcrerrazfgb2arzc4pde5q 148 2 . . NNP work_kv3srcrerrazfgb2arzc4pde5q 148 3 , , , work_kv3srcrerrazfgb2arzc4pde5q 148 4 DOI DOI NNP work_kv3srcrerrazfgb2arzc4pde5q 148 5 10.7717 10.7717 CD work_kv3srcrerrazfgb2arzc4pde5q 148 6 / / SYM work_kv3srcrerrazfgb2arzc4pde5q 148 7 peerj peerj NNP work_kv3srcrerrazfgb2arzc4pde5q 148 8 - - HYPH work_kv3srcrerrazfgb2arzc4pde5q 148 9 cs.45 cs.45 NNP work_kv3srcrerrazfgb2arzc4pde5q 148 10 7/7 7/7 CD work_kv3srcrerrazfgb2arzc4pde5q 148 11 https://peerj.com/computer-science/ https://peerj.com/computer-science/ NNP work_kv3srcrerrazfgb2arzc4pde5q 148 12 http://dx.doi.org/10.1093/nar/gkt1114 http://dx.doi.org/10.1093/nar/gkt1114 NNP work_kv3srcrerrazfgb2arzc4pde5q 148 13 http://dx.doi.org/10.1038/nsmb.2301 http://dx.doi.org/10.1038/nsmb.2301 NN work_kv3srcrerrazfgb2arzc4pde5q 148 14 http://dx.doi.org/10.1016/j.cell.2015.02.003 http://dx.doi.org/10.1016/j.cell.2015.02.003 NNP work_kv3srcrerrazfgb2arzc4pde5q 148 15 http://dx.doi.org/10.7717/peerj-cs.45 http://dx.doi.org/10.7717/peerj-cs.45 DT work_kv3srcrerrazfgb2arzc4pde5q 148 16 PATACSDB PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 148 17 --- --- : work_kv3srcrerrazfgb2arzc4pde5q 148 18 the the DT work_kv3srcrerrazfgb2arzc4pde5q 148 19 database database NN work_kv3srcrerrazfgb2arzc4pde5q 148 20 of of IN work_kv3srcrerrazfgb2arzc4pde5q 148 21 polyA polyA NNP work_kv3srcrerrazfgb2arzc4pde5q 148 22 translational translational JJ work_kv3srcrerrazfgb2arzc4pde5q 148 23 attenuators attenuator NNS work_kv3srcrerrazfgb2arzc4pde5q 148 24 in in IN work_kv3srcrerrazfgb2arzc4pde5q 148 25 coding code VBG work_kv3srcrerrazfgb2arzc4pde5q 148 26 sequences sequence NNS work_kv3srcrerrazfgb2arzc4pde5q 148 27 Background Background NNP work_kv3srcrerrazfgb2arzc4pde5q 148 28 PATACSDB PATACSDB NNP work_kv3srcrerrazfgb2arzc4pde5q 148 29 server server NN work_kv3srcrerrazfgb2arzc4pde5q 148 30 PolyA PolyA NNP work_kv3srcrerrazfgb2arzc4pde5q 148 31 tracks track VBZ work_kv3srcrerrazfgb2arzc4pde5q 148 32 across across IN work_kv3srcrerrazfgb2arzc4pde5q 148 33 eukaryotic eukaryotic JJ work_kv3srcrerrazfgb2arzc4pde5q 148 34 organisms organism NNS work_kv3srcrerrazfgb2arzc4pde5q 148 35 Software Software NNP work_kv3srcrerrazfgb2arzc4pde5q 148 36 architecture architecture NN work_kv3srcrerrazfgb2arzc4pde5q 148 37 References reference NNS