id	author	title	date	pages	extension	mime	words	sentences	flesch	summary	cache	txt
work_r6pcfgi7a5ejnbnkrndajtj3t4	Bruno Contrino	DOSCHEDA: a web application for interactive chemoproteomics data analysis	2017	11	.pdf	application/pdf	3953	441	51	experiments, to filter peptide intensities based on linear correlations between replicates, iTRAQ, Proteomics, Quantitative Chemical biology, Drug dose-response, Protein drug profiling (2017), DOSCHEDA: a web application for interactive chemoproteomics data analysis. and protein quantification, such as Proteome Discoverer (https://www.thermofisher.com/), (Down Stream Chemoproteomics Data Analysis), which includes: (i) an open-source code data-input routine which enables the user to import different file types (.txt, .xlsx, .csv), DOSCHEDA processes the data based on a series of pipelines developed and integrated When peptide intensities and two replicates are available, DOSCHEDA implements The user should initially run the exploratory data analysis in DOSCHEDA up to the DOSCHEDA generates a variety of different plots depending on the user's data input, as DOSCHEDA Down Stream Chemoproteomics Data Analysis Supplemental information for this article can be found online at http://dx.doi.org/10.7717/ MSstats: an R package for statistical analysis of quantitative mass spectrometry-based http://dx.doi.org/10.7717/peerj-cs.129#supplemental-information http://dx.doi.org/10.7717/peerj-cs.129#supplemental-information	./cache/work_r6pcfgi7a5ejnbnkrndajtj3t4.pdf	./txt/work_r6pcfgi7a5ejnbnkrndajtj3t4.txt