id	author	title	date	pages	extension	mime	words	sentences	flesch	summary	cache	txt
work_knwdputcjze7viktx5uhxwuuke	Andrew E. Webb	VESPA: Very large-scale Evolutionary and Selective Pressure Analyses	2017	16	.pdf	application/pdf	6223	765	62	VESPA provides flexible software for simplifying these processes along with downstream selective pressure variation analyses. Keywords Selective pressure analysis, Protein molecular evolution, Large-scale comparative VESPA helps automation by preparing input data files and processing results but program For three of the five phases (data preparation, homology searching, and selective pressure analysis assessment) the functions invoked in both the basic and advanced options are identical. output files for each homologous gene family detailing the results of the codeML analysis. A tarball of the data and results of the VESPA analysis of 18 gene families (i.e., input sequences, alignments, trees, codeml output, VESPA summary at each phase) have been Table 3 Comparison of the results from 18 gene families from the Selectome database analysed in VESPA. positive selection following VESPA analysis using the alternative alignments, it should be VESPA could be used to perform a selective pressure analysis on protein-coding transcripts	./cache/work_knwdputcjze7viktx5uhxwuuke.pdf	./txt/work_knwdputcjze7viktx5uhxwuuke.txt