Carrel name: journal-travelMedInfectDis-cord Creating study carrel named journal-travelMedInfectDis-cord Initializing database file: cache/cord-029965-bt87kai8.json key: cord-029965-bt87kai8 authors: Patel, Shailesh Kumar; Singh, Rohit; Rana, Jigyasa; Tiwari, Ruchi; Natesan, Senthilkumar; Harapan, Harapan; Arteaga-Livias, Kovy; Bonilla-Aldana, D. Katterine; Rodríguez-Morales, Alfonso J.; Dhama, Kuldeep title: The kidney and COVID-19 patients – important considerations date: 2020-08-01 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101831 sha: doc_id: 29965 cord_uid: bt87kai8 file: cache/cord-006968-1gua1abq.json key: cord-006968-1gua1abq authors: Tada, Yuki; Okabe, Nobuhiko; Kimura, Mikio title: Travelers' risk of malaria by destination country: A study from Japan date: 2008-09-23 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2008.08.002 sha: doc_id: 6968 cord_uid: 1gua1abq file: cache/cord-254717-1hwdd7nq.json key: cord-254717-1hwdd7nq authors: Al-Tawfiq, Jaffar A.; Al-Homoud, Ali H.; Memish, Ziad A. title: Remdesivir as a possible therapeutic option for the COVID-19 date: 2020-03-05 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101615 sha: doc_id: 254717 cord_uid: 1hwdd7nq file: cache/cord-259106-nrg1960d.json key: cord-259106-nrg1960d authors: Vasquez-Chavesta, Angie Z.; Morán-Mariños, Cristian; Rodrigo-Gallardo, Paola K.; Toro-Huamanchumo, Carlos J. title: COVID-19 and dengue: Pushing the peruvian health care system over the edge date: 2020-06-26 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101808 sha: doc_id: 259106 cord_uid: nrg1960d file: cache/cord-255560-c8s9f12f.json key: cord-255560-c8s9f12f authors: Arab-Mazar, Zahra; Sah, Ranjit; Rabaan, Ali A.; Dhama, Kuldeep; Rodriguez-Morales, Alfonso J. title: Mapping the incidence of the COVID-19 hotspot in Iran – Implications for Travellers date: 2020-03-14 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101630 sha: doc_id: 255560 cord_uid: c8s9f12f file: cache/cord-257099-8k28vkgf.json key: cord-257099-8k28vkgf authors: Fan, Jingchun; Liu, Xiaodong; Shao, Guojun; Qi, Junpin; Li, Yi; Pan, Weimin; Hambly, Brett D.; Bao, Shisan title: The epidemiology of reverse transmission of COVID-19 in Gansu Province, China date: 2020-05-12 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101741 sha: doc_id: 257099 cord_uid: 8k28vkgf parallel: Warning: No more processes: Decreasing number of running jobs to 62. parallel: Warning: Raising ulimit -u or /etc/security/limits.conf may help. file: cache/cord-259966-szkiilb1.json key: cord-259966-szkiilb1 authors: Gautret, Philippe; Angelo, Kristina M.; Asgeirsson, Hilmir; Duvignaud, Alexandre; van Genderen, Perry J.J.; Bottieau, Emmanuel; Chen, Lin H.; Parker, Salim; Connor, Bradley A.; Barnett, Elizabeth D.; Libman, Michael; Hamer, Davidson H. title: International mass gatherings and travel-associated illness: A GeoSentinel cross-sectional, observational study date: 2019-11-09 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2019.101504 sha: doc_id: 259966 cord_uid: szkiilb1 file: cache/cord-260256-aczn39lf.json key: cord-260256-aczn39lf authors: Wehrens, Erik; Bangura, James S.; Falama, Abdul M.; Kamara, Kelfala B.B.; Dubbink, Jan H.; Bolkan, Håkon A.; Grobusch, Martin P. title: Primum non nocere: Potential indirect adverse effects of COVID-19 containment strategies in the African region date: 2020-04-29 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101727 sha: doc_id: 260256 cord_uid: aczn39lf file: cache/cord-261303-xjbz9fw9.json key: cord-261303-xjbz9fw9 authors: Ahmed, Qanta A.; Memish, Ziad A. title: From the “Madding Crowd” to mass gatherings-religion, sport, culture and public health date: 2018-06-04 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2018.06.001 sha: doc_id: 261303 cord_uid: xjbz9fw9 file: cache/cord-262454-bccrvapy.json key: cord-262454-bccrvapy authors: Szente Fonseca, Silvia Nunes; Queiroz de Sousa, Anastasio; Wolkoff, Alexandre Giandoni; Moreira, Marcelo Sampaio; Pinto, Bruno Castro; Valente Takeda, Christianne Fernandes; Rebouças, Eduardo; Vasconcellos Abdon, Ana Paula; Nascimento, Anderson L.A.; Risch, Harvey A. title: Risk of Hospitalization for Covid-19 Outpatients Treated with Various Drug Regimens in Brazil: Comparative Analysis date: 2020-10-31 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101906 sha: doc_id: 262454 cord_uid: bccrvapy file: cache/cord-263968-v9sncm4l.json key: cord-263968-v9sncm4l authors: Ahmed, Anwar E. title: Incidence of coronavirus disease (COVID-19) and countries affected by malarial infections date: 2020-04-22 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101693 sha: doc_id: 263968 cord_uid: v9sncm4l file: cache/cord-264127-t7w407it.json key: cord-264127-t7w407it authors: Fakhar-e-Alam Kulyar, Muhammad; Bhutta, Zeeshan Ahmad; Shabbir, Samina; Akhtar, Muhammad title: Psychosocial impact of COVID-19 outbreak on international students living in Hubei province, China date: 2020-04-26 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101712 sha: doc_id: 264127 cord_uid: t7w407it file: cache/cord-264655-v0v7zsaw.json key: cord-264655-v0v7zsaw authors: Kuwahara, Keisuke; Kuroda, Ai; Fukuda, Yoshiharu title: COVID-19: Active measures to support community-dwelling older adults date: 2020-03-20 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101638 sha: doc_id: 264655 cord_uid: v0v7zsaw file: cache/cord-266313-b518n9dx.json /data-disk/reader-compute/reader-cord/bin/json2txt-carrel.sh: fork: retry: No child processes key: cord-266313-b518n9dx authors: Cao, Yu-chen; Deng, Qi-xin; Dai, Shi-xue title: Remdesivir for severe acute respiratory syndrome coronavirus 2 causing COVID-19: An evaluation of the evidence date: 2020-04-02 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101647 sha: doc_id: 266313 cord_uid: b518n9dx file: cache/cord-268519-t15yvy5s.json key: cord-268519-t15yvy5s authors: Pothen, Lucie; Yildiz, Halil; De Greef, Julien; Penaloza, Andrea; Beauloye, Christophe; Belkhir, Leila; Yombi, Jean Cyr title: Safety use of hydroxychloroquine and its combination with azithromycin in the context of Sars-CoV-2 outbreak: Clinical experience in a Belgian tertiary center date: 2020-06-12 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101788 sha: doc_id: 268519 cord_uid: t15yvy5s file: cache/cord-268971-4ue58ebz.json key: cord-268971-4ue58ebz authors: Virk, Abinash; Fischer, Philip R. title: Travel medicine: an American view of the Australian perspective date: 2005-03-03 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2004.11.008 sha: doc_id: 268971 cord_uid: 4ue58ebz file: cache/cord-269759-1n1oo6wc.json key: cord-269759-1n1oo6wc authors: Villamil-Gómez, Wilmer E.; Sánchez, Álvaro; Gelis, Libardo; Silvera, Luz Alba; Barbosa, Juliana; Otero-Nader, Octavio; Bonilla-Salgado, Carlos David; Rodríguez-Morales, Alfonso J. title: Fatal human coronavirus 229E (HCoV-229E) and RSV–Related pneumonia in an AIDS patient from Colombia date: 2020-02-06 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101573 sha: doc_id: 269759 cord_uid: 1n1oo6wc file: cache/cord-270684-e7xnugdd.json key: cord-270684-e7xnugdd authors: Iken, Oluwatomi; Abakporo, Uzoma; Ayobami, Olaniyi; Attoye, Timothy title: COVID-19: Travel health and the implications for sub -Saharan Africa date: 2020-04-09 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101645 sha: doc_id: 270684 cord_uid: e7xnugdd file: cache/cord-271004-gtmo5ixs.json key: cord-271004-gtmo5ixs authors: Al-Tawfiq, Jaffar A.; Rabaan, Ali A.; Hinedi, Kareem title: Influenza is more common than Middle East Respiratory Syndrome Coronavirus (MERS-CoV) among hospitalized adult Saudi patients date: 2017-10-12 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2017.10.004 sha: doc_id: 271004 cord_uid: gtmo5ixs file: cache/cord-273930-4asx0dq3.json key: cord-273930-4asx0dq3 authors: Ortiz-Martínez, Yeimer; Cabeza-Ruiz, Luis Daniel; Vásquez-Lozano, Sergio Humberto; Villamil-Gómez, Wilmer E.; Rodriguez-Morales, Alfonso J. title: Pericarditis in a young internal medicine resident with COVID-19 in Colombia date: 2020-08-28 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101863 sha: doc_id: 273930 cord_uid: 4asx0dq3 file: cache/cord-275605-mbiojk39.json key: cord-275605-mbiojk39 authors: Benkouiten, Samir; Al-Tawfiq, Jaffar A.; Memish, Ziad A.; Albarrak, Ali; Gautret, Philippe title: Clinical respiratory infections and pneumonia during the Hajj pilgrimage: A systematic review date: 2018-12-04 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2018.12.002 sha: doc_id: 275605 cord_uid: mbiojk39 file: cache/cord-276839-kxfxybq4.json key: cord-276839-kxfxybq4 authors: Dursun, Zehra Beştepe; Kilic, Aysegul Ulu-; Alabay, Selma; Benli, Ali Ramazan; Çelik, İlhami title: COVID-19 among Turkish citizens returning from abroad date: 2020-09-01 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101860 sha: doc_id: 276839 cord_uid: kxfxybq4 file: cache/cord-277353-qilq1q7h.json key: cord-277353-qilq1q7h authors: Taniguchi, Kiyosu; Yoshida, Makiko; Sunagawa, Tomimasa; Tada, Yuki; Okabe, Nobuhiko title: Imported infectious diseases and surveillance in Japan date: 2008-09-11 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2008.07.001 sha: doc_id: 277353 cord_uid: qilq1q7h file: cache/cord-281551-0aj2zwx8.json key: cord-281551-0aj2zwx8 authors: Schlagenhauf, Patricia; Grobusch, Martin P.; Maier, Julian D.; Gautret, Philippe title: Repurposing antimalarials and other drugs for COVID-19 date: 2020-04-02 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101658 sha: doc_id: 281551 cord_uid: 0aj2zwx8 file: cache/cord-284028-l0r7f9sr.json key: cord-284028-l0r7f9sr authors: Lee, Chi-Wei; Tsai, Yen-Shuo; Wong, Tai-Wai; Lau, Chor-Chiu title: A loophole in international quarantine procedures disclosed during the SARS crisis date: 2004-12-30 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2004.10.002 sha: doc_id: 284028 cord_uid: l0r7f9sr file: cache/cord-284477-3mspnc8q.json key: cord-284477-3mspnc8q authors: Kassem, Issmat I. title: Refugees besieged: The lurking threat of COVID-19 in Syrian war refugee camps date: 2020-05-05 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101736 sha: doc_id: 284477 cord_uid: 3mspnc8q file: cache/cord-286029-rafcdzhm.json key: cord-286029-rafcdzhm authors: Bogaards, Johannes Antonie; Putter, Hein; Jan Weverling, Gerrit; ter Meulen, Jan; Goudsmit, Jaap title: The potential of targeted antibody prophylaxis in SARS outbreak control: A mathematic analysis() date: 2006-05-05 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2006.01.007 sha: doc_id: 286029 cord_uid: rafcdzhm file: cache/cord-286654-sox98pp3.json key: cord-286654-sox98pp3 authors: Gautret, Philippe; Benkouiten, Samir; Griffiths, Karolina; Sridhar, Shruti title: The inevitable Hajj cough: Surveillance data in French pilgrims, 2012–2014 date: 2015-10-03 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2015.09.008 sha: doc_id: 286654 cord_uid: sox98pp3 file: cache/cord-287159-bjccnp7u.json key: cord-287159-bjccnp7u authors: Yavarian, Jila; Shafiei Jandaghi, Nazanin Zahra; Naseri, Maryam; Hemmati, Peyman; Dadras, Mohhamadnasr; Gouya, Mohammad Mehdi; Mokhtari Azad, Talat title: Influenza virus but not MERS coronavirus circulation in Iran, 2013–2016: Comparison between pilgrims and general population date: 2017-10-12 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2017.10.007 sha: doc_id: 287159 cord_uid: bjccnp7u file: cache/cord-288270-x1j0r9jk.json key: cord-288270-x1j0r9jk authors: Daw, Mohamed A. title: Preliminary epidemiological analysis of suspected cases of corona virus infection in Libya date: 2020-03-20 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101634 sha: doc_id: 288270 cord_uid: x1j0r9jk file: cache/cord-291025-u5z8zji3.json key: cord-291025-u5z8zji3 authors: Karami, Parisa; Naghavi, Maliheh; Feyzi, Abdolamir; Aghamohammadi, Mehdi; Novin, Mohammad Sadegh; Mobaien, Ahmadreza; Qorbanisani, Mohamad; Karami, Aida; Norooznezhad, Amir Hossein title: Mortality of a pregnant patient diagnosed with COVID-19: A case report with clinical, radiological, and histopathological findings date: 2020-04-11 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101665 sha: doc_id: 291025 cord_uid: u5z8zji3 file: cache/cord-292513-7mhd4wzk.json key: cord-292513-7mhd4wzk authors: Yi-Fong Su, Vincent; Yen, Yung-Feng; Yang, Kuang-Yao; Su, Wei-Juin; Chou, Kun-Ta; Chen, Yuh-Min; Perng, Diahn-Warng title: Masks and medical care: Two keys to Taiwan's success in preventing COVID-19 spread date: 2020-06-04 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101780 sha: doc_id: 292513 cord_uid: 7mhd4wzk file: cache/cord-295601-jdtmtjx5.json key: cord-295601-jdtmtjx5 authors: Kabir, Mahvish; Afzal, Muhammad Sohail; Khan, Aisha; Ahmed, Haroon title: COVID-19 pandemic and economic cost; impact on forcibly displaced people date: 2020-04-06 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101661 sha: doc_id: 295601 cord_uid: jdtmtjx5 file: cache/cord-297954-87w2itin.json key: cord-297954-87w2itin authors: Memish, Ziad A.; Al-Tawfiq, Jaffar A.; Alhakeem, Rafat F.; Assiri, Abdullah; Alharby, Khalid D.; Almahallawi, Maher S.; Alkhallawi, Mohammed title: Middle East respiratory syndrome coronavirus (MERS-CoV): A cluster analysis with implications for global management of suspected cases date: 2015-07-15 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2015.06.012 sha: doc_id: 297954 cord_uid: 87w2itin file: cache/cord-302735-zal2gr28.json key: cord-302735-zal2gr28 authors: Priyanka; Choudhary, Om Prakash; Singh, Indraj; Patra, Gautam title: Aerosol transmission of SARS-CoV-2: The unresolved paradox date: 2020-09-04 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101869 sha: doc_id: 302735 cord_uid: zal2gr28 file: cache/cord-302784-jkjdglns.json key: cord-302784-jkjdglns authors: Alotaibi, Badriah; Bieh, Kingsley; Yassin, Yara; Mushi, Abdulaziz; Maashi, Fuad; Awam, Amnah; Mohamed, Gamal; Hassan, Amir; Yezli, Saber title: Management of hospitalized drug sensitive pulmonary tuberculosis patients during the Hajj mass gathering: A cross sectional study date: 2019-07-13 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2019.07.007 sha: doc_id: 302784 cord_uid: jkjdglns file: cache/cord-307460-v6xgkg1p.json key: cord-307460-v6xgkg1p authors: Hsu, Yu-Lung; Lin, Hsiao-Chuan; Wei, Hsiu-Mei; Lai, Huan-Cheng; Hwang, Kao-Pin title: Temperature and the difference in impact of SARS CoV-2 infection (COVID-19) between tropical and non-tropical regions in Taiwan date: 2020-06-13 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101790 sha: doc_id: 307460 cord_uid: v6xgkg1p file: cache/cord-307464-66eqh79t.json key: cord-307464-66eqh79t authors: Hwang, Grace M.; Mahoney, Paula J.; James, John H.; Lin, Gene C.; Berro, Andre D.; Keybl, Meredith A.; Goedecke, D. Michael; Mathieu, Jennifer J.; Wilson, Todd title: A model-based tool to predict the propagation of infectious disease via airports date: 2012-01-13 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2011.12.003 sha: doc_id: 307464 cord_uid: 66eqh79t file: cache/cord-310149-8idvf79g.json key: cord-310149-8idvf79g authors: Antinori, Spinello; Torre, Alessandro; Antinori, Carolina; Bonazzetti, Cecilia; Sollima, Salvatore; Ridolfo, Anna Lisa; Galli, Massimo title: SARS-COV-2 infection: Across the border into the family date: 2020-06-09 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101784 sha: doc_id: 310149 cord_uid: 8idvf79g parallel: Warning: No more processes: Decreasing number of running jobs to 61. parallel: Warning: Raising ulimit -u or /etc/security/limits.conf may help. file: cache/cord-311011-xzfnzbcf.json key: cord-311011-xzfnzbcf authors: Chen, Juan; Feng, Zhan-hui; Ye, Lan; Cheng, Yong-ran; Zhou, Meng-Yun; Li, Yafei; Du, Chong; Wang, Liansheng; Wang, Ming-Wei title: Travel rush during Chinese Spring Festival and the 2019-nCoV date: 2020-04-22 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101686 sha: doc_id: 311011 cord_uid: xzfnzbcf file: cache/cord-311979-l1iw6449.json key: cord-311979-l1iw6449 authors: Cimolai, Nevio title: More data are required for incubation period, infectivity, and quarantine duration for COVID-19 date: 2020-04-27 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101713 sha: doc_id: 311979 cord_uid: l1iw6449 parallel: Warning: No more processes: Decreasing number of running jobs to 60. parallel: Warning: Raising ulimit -u or /etc/security/limits.conf may help. file: cache/cord-312691-ynh84b98.json key: cord-312691-ynh84b98 authors: Mohd, Hamzah A.; Memish, Ziad A.; Alfaraj, Sarah H.; McClish, Donna; Altuwaijri, Talal; Alanazi, Marzouqah S.; Aloqiel, Saleh A.; Alenzi, Ahmed M.; Bafaqeeh, Fahad; Mohamed, Amal M.; Aldosari, Kamel; Ghazal, Sameeh title: Predictors of MERS-CoV infection: A large case control study of patients presenting with ILI at a MERS-CoV referral hospital in Saudi Arabia date: 2016-09-24 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2016.09.008 sha: doc_id: 312691 cord_uid: ynh84b98 file: cache/cord-313546-rlq4v0ca.json key: cord-313546-rlq4v0ca authors: Bielecki, Michel; Gerardo Crameri, Giovanni Andrea; Schlagenhauf, Patricia; Buehrer, Thomas Werner; Deuel, Jeremy Werner title: Body temperature screening to identify SARS-CoV-2 infected young adult travellers is ineffective date: 2020-08-05 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101832 sha: doc_id: 313546 cord_uid: rlq4v0ca file: cache/cord-314421-j5psma9i.json key: cord-314421-j5psma9i authors: Ahmed, Qanta A.; Memish, Ziad A. title: The cancellation of mass gatherings (MGs)? Decision making in the time of COVID-19 date: 2020-03-14 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101631 sha: doc_id: 314421 cord_uid: j5psma9i file: cache/cord-314609-83t1je92.json key: cord-314609-83t1je92 authors: Daw, Mohamed A. title: Corona virus infection in Syria, Libya and Yemen; an alarming devastating threat date: 2020-04-02 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101652 sha: doc_id: 314609 cord_uid: 83t1je92 file: cache/cord-314607-bcocsjij.json /data-disk/reader-compute/reader-cord/bin/json2txt-carrel.sh: fork: retry: No child processes key: cord-314607-bcocsjij authors: Memish, Ziad A.; Assiri, Abdullah M.; Alshehri, Mohammed; Hussain, Raheela; Alomar, Ibrahim title: The prevalance of respiratory viruses among healthcare workers serving pilgrims in Makkah during the 2009 influenza A (H1N1) pandemic date: 2011-12-23 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2011.11.002 sha: doc_id: 314607 cord_uid: bcocsjij file: cache/cord-316097-608qex0d.json key: cord-316097-608qex0d authors: Al-Tawfiq, Jaffar A. title: Asymptomatic coronavirus infection: MERS-CoV and SARS-CoV-2 (COVID-19) date: 2020-02-27 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101608 sha: doc_id: 316097 cord_uid: 608qex0d file: cache/cord-320893-bgn04zh3.json key: cord-320893-bgn04zh3 authors: Mubarak, Naeem; Zin, Che Suraya title: Religious tourism and mass religious gatherings — The potential link in the spread of COVID-19. Current perspective and future implications date: 2020-06-09 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101786 sha: doc_id: 320893 cord_uid: bgn04zh3 file: cache/cord-321720-5sfwyn9g.json key: cord-321720-5sfwyn9g authors: Hanscheid, Thomas; Valadas, Emília; Grobusch, Martin P. title: Coronavirus 2019-nCoV: Is the genie already out of the bottle? date: 2020-02-07 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101577 sha: doc_id: 321720 cord_uid: 5sfwyn9g file: cache/cord-323622-229kub7c.json key: cord-323622-229kub7c authors: Ou, Xueting; Zhou, Liyang; Huang, Huanliang; Lin, Yuebao; Pan, Xingfei; Chen, Dexiong title: A severe case with co-infection of SARS-CoV-2 and common respiratory pathogens date: 2020-04-16 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101672 sha: doc_id: 323622 cord_uid: 229kub7c file: cache/cord-324345-j43rpvwk.json key: cord-324345-j43rpvwk authors: Leong, Hoe Nam; Lim, Hong Huay title: SARS – My personal battle date: 2010-11-19 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2010.10.007 sha: doc_id: 324345 cord_uid: j43rpvwk file: cache/cord-327063-ea7a1xfl.json key: cord-327063-ea7a1xfl authors: Dhama, Kuldeep; Patel, Shailesh Kumar; Sharun, Khan; Pathak, Mamta; Tiwari, Ruchi; Yatoo, Mohd Iqbal; Malik, Yashpal Singh; Sah, Ranjit; Rabaan, Ali A.; Panwar, Parmod Kumar; Singh, Karam Pal; Michalak, Izabela; Chaicumpa, Wanpen; Martinez-Pulgarin, Dayron F.; Bonilla-Aldana, D. Katterine; Rodriguez-Morales, Alfonso J. title: SARS-CoV-2 jumping the species barrier: zoonotic lessons from SARS, MERS and recent advances to combat this pandemic virus date: 2020-08-02 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101830 sha: doc_id: 327063 cord_uid: ea7a1xfl file: cache/cord-325069-wxdkao69.json /data-disk/reader-compute/reader-cord/bin/json2txt-carrel.sh: fork: retry: No child processes /data-disk/reader-compute/reader-cord/bin/json2txt-carrel.sh: fork: retry: Resource temporarily unavailable key: cord-325069-wxdkao69 authors: Khatri, Priyanka; Singh, Shweta R; Belani, Neeta Kesu; Yeong, Yin Leng; Lohan, Rahul; Lim, Yee Wei; Teo, Winnie ZY title: YouTube as source of information on 2019 novel coronavirus outbreak: a cross sectional study of English and Mandarin content date: 2020-03-20 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101636 sha: doc_id: 325069 cord_uid: wxdkao69 file: cache/cord-328056-y5x80tuw.json key: cord-328056-y5x80tuw authors: Popescu, Corneliu P.; Fischer, Philip R. title: Hydroxychloroquine-azithromycin for COVID-19 – Warranted or dangerous? date: 2020-05-30 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101764 sha: doc_id: 328056 cord_uid: y5x80tuw file: cache/cord-337713-uuo1oeyc.json key: cord-337713-uuo1oeyc authors: Ollarves-Carrero, Maria Fernanda; Rodriguez-Morales, Andrea G.; Bonilla-Aldana, D. Katterine; Rodriguez-Morales, Alfonso J. title: Anosmia in a healthcare worker with COVID-19 in Madrid, Spain date: 2020-04-13 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101666 sha: doc_id: 337713 cord_uid: uuo1oeyc file: cache/cord-335007-27a3h2lo.json key: cord-335007-27a3h2lo authors: Dreyer, Nancy A.; Reynolds, Matthew; DeFilippo Mack, Christina; Brinkley, Emma; Petruski-Ivleva, Natalia; Hawaldar, Kalyani; Toovey, Stephen; Morris, Jonathan title: Self-reported symptoms from exposure to Covid-19 provide support to clinical diagnosis, triage and prognosis: An exploratory analysis date: 2020-11-03 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101909 sha: doc_id: 335007 cord_uid: 27a3h2lo file: cache/cord-340094-u3x4g8ul.json key: cord-340094-u3x4g8ul authors: D’Alò, Gian Loreto; Modica, Domenico Cicciarella; Maurici, Massimo; Mozzetti, Cinzia; Messina, Alessandra; Distefano, Alessandra; Pica, Francesca; De Filippis, Patrizia title: Microbial contamination of the surface of mobile phones and implications for the containment of the Covid-19 pandemic date: 2020-09-02 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101870 sha: doc_id: 340094 cord_uid: u3x4g8ul file: cache/cord-340942-oatf59k0.json key: cord-340942-oatf59k0 authors: Magalhães, Jurandy Júnior Ferraz de; Mendes, Renata Pessoa Germano; Silva, Caroline Targino Alves da; Silva, Severino Jefferson Ribeiro da; Guarines, Klarissa Miranda; Pena, Lindomar title: Epidemiological and clinical characteristics of the first 557 successive patients with COVID-19 in Pernambuco state, Northeast Brazil date: 2020-09-21 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101884 sha: doc_id: 340942 cord_uid: oatf59k0 file: cache/cord-339444-f8lfob47.json key: cord-339444-f8lfob47 authors: Bigna, Jean Joel; Kamtchum-Tatuene, Joseph; Noubiap, Jean Jacques title: Claims about the safety and efficacy of early treatment of COVID-19 with hydroxychloroquine and azithromycin must be supported by real evidence date: 2020-09-25 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101886 sha: doc_id: 339444 cord_uid: f8lfob47 file: cache/cord-341101-5yvjbr5q.json key: cord-341101-5yvjbr5q authors: Hashem, Anwar M.; Alghamdi, Badrah S.; Algaissi, Abdullah A.; Alshehri, Fahad S.; Bukhari, Abdullah; Alfaleh, Mohamed A.; Memish, Ziad A. title: Therapeutic use of chloroquine and hydroxychloroquine in COVID-19 and other viral infections: A narrative review date: 2020-05-06 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101735 sha: doc_id: 341101 cord_uid: 5yvjbr5q file: cache/cord-353507-n01ce0x3.json key: cord-353507-n01ce0x3 authors: Dao, Thi Loi; Nguyen, The Diep; Hoang, Van Thuan title: Controlling the COVID-19 pandemic: Useful lessons from Vietnam date: 2020-07-10 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101822 sha: doc_id: 353507 cord_uid: n01ce0x3 file: cache/cord-341187-jqesw4e8.json key: cord-341187-jqesw4e8 authors: Yu, Xinhua title: Modeling Return of the Epidemic: Impact of Population Structure, Asymptomatic Infection, Case Importation and Personal Contacts date: 2020-08-27 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101858 sha: doc_id: 341187 cord_uid: jqesw4e8 file: cache/cord-338136-nbtkl5cx.json /data-disk/reader-compute/reader-cord/bin/json2txt-carrel.sh: fork: retry: No child processes key: cord-338136-nbtkl5cx authors: Clemente, Nuria Sanchez; Ramond, Anna; Turchi Martelli, Celina Maria; Brickley, Elizabeth B. title: Geographies of risk: Emerging infectious diseases and travel health data date: 2020-06-25 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2020.101806 sha: doc_id: 338136 cord_uid: nbtkl5cx Reading metadata file and updating bibliogrpahics === updating bibliographic database Building study carrel named journal-travelMedInfectDis-cord /data-disk/reader-compute/reader-cord/bin/map.sh: fork: retry: No child processes parallel: Warning: No more processes: Decreasing number of running jobs to 62. parallel: Warning: Raising ulimit -u or /etc/security/limits.conf may help. parallel: Warning: No more processes: Decreasing number of running jobs to 62. parallel: Warning: Raising ulimit -u or /etc/security/limits.conf may help. parallel: Warning: No more processes: Decreasing number of running jobs to 62. parallel: Warning: Raising ulimit -u or /etc/security/limits.conf may help. parallel: Warning: No more processes: Decreasing number of running jobs to 62. parallel: Warning: Raising ulimit -u or /etc/security/limits.conf may help. parallel: Warning: No more processes: Decreasing number of running jobs to 61. parallel: Warning: Raising ulimit -u or /etc/security/limits.conf may help. parallel: Warning: No more processes: Decreasing number of running jobs to 60. parallel: Warning: Raising ulimit -u or /etc/security/limits.conf may help. /data-disk/reader-compute/reader-cord/bin/cordpos2carrel.sh: fork: retry: No child processes /data-disk/reader-compute/reader-cord/bin/cordpos2carrel.sh: fork: retry: No child processes /data-disk/reader-compute/reader-cord/bin/txt2urls.sh: fork: retry: Resource temporarily unavailable /data-disk/reader-compute/reader-cord/bin/cordpos2carrel.sh: fork: retry: No child processes /data-disk/reader-compute/reader-cord/bin/txt2urls.sh: fork: retry: No child processes === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59064 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59308 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59036 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59143 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59071 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59517 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59094 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59160 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59089 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59074 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59102 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59550 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59693 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59509 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60445 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59067 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59195 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59892 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59337 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59662 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 61259 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59386 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 61546 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60269 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60677 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59333 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60449 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60712 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60390 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60408 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 59864 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60644 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60932 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 62389 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60850 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60490 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 60641 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 62232 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === OMP: Error #34: System unable to allocate necessary resources for OMP thread: OMP: System error #11: Resource temporarily unavailable OMP: Hint Try decreasing the value of OMP_NUM_THREADS. /data-disk/reader-compute/reader-cord/bin/file2bib.sh: line 39: 61301 Aborted $FILE2BIB "$FILE" > "$OUTPUT" === file2bib.sh === id: cord-260256-aczn39lf author: Wehrens, Erik title: Primum non nocere: Potential indirect adverse effects of COVID-19 containment strategies in the African region date: 2020-04-29 pages: extension: .txt txt: ./txt/cord-260256-aczn39lf.txt cache: ./cache/cord-260256-aczn39lf.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 2 resourceName b'cord-260256-aczn39lf.txt' === file2bib.sh === id: cord-273930-4asx0dq3 author: Ortiz-Martínez, Yeimer title: Pericarditis in a young internal medicine resident with COVID-19 in Colombia date: 2020-08-28 pages: extension: .txt txt: ./txt/cord-273930-4asx0dq3.txt cache: ./cache/cord-273930-4asx0dq3.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 3 resourceName b'cord-273930-4asx0dq3.txt' === file2bib.sh === id: cord-268971-4ue58ebz author: Virk, Abinash title: Travel medicine: an American view of the Australian perspective date: 2005-03-03 pages: extension: .txt txt: ./txt/cord-268971-4ue58ebz.txt cache: ./cache/cord-268971-4ue58ebz.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 3 resourceName b'cord-268971-4ue58ebz.txt' === file2bib.sh === id: cord-029965-bt87kai8 author: Patel, Shailesh Kumar title: The kidney and COVID-19 patients – important considerations date: 2020-08-01 pages: extension: .txt txt: ./txt/cord-029965-bt87kai8.txt cache: ./cache/cord-029965-bt87kai8.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 3 resourceName b'cord-029965-bt87kai8.txt' === file2bib.sh === id: cord-284477-3mspnc8q author: Kassem, Issmat I. title: Refugees besieged: The lurking threat of COVID-19 in Syrian war refugee camps date: 2020-05-05 pages: extension: .txt txt: ./txt/cord-284477-3mspnc8q.txt cache: ./cache/cord-284477-3mspnc8q.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 3 resourceName b'cord-284477-3mspnc8q.txt' === file2bib.sh === id: cord-264655-v0v7zsaw author: Kuwahara, Keisuke title: COVID-19: Active measures to support community-dwelling older adults date: 2020-03-20 pages: extension: .txt txt: ./txt/cord-264655-v0v7zsaw.txt cache: ./cache/cord-264655-v0v7zsaw.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 2 resourceName b'cord-264655-v0v7zsaw.txt' === file2bib.sh === id: cord-295601-jdtmtjx5 author: Kabir, Mahvish title: COVID-19 pandemic and economic cost; impact on forcibly displaced people date: 2020-04-06 pages: extension: .txt txt: ./txt/cord-295601-jdtmtjx5.txt cache: ./cache/cord-295601-jdtmtjx5.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 2 resourceName b'cord-295601-jdtmtjx5.txt' === file2bib.sh === id: cord-302735-zal2gr28 author: Priyanka title: Aerosol transmission of SARS-CoV-2: The unresolved paradox date: 2020-09-04 pages: extension: .txt txt: ./txt/cord-302735-zal2gr28.txt cache: ./cache/cord-302735-zal2gr28.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 2 resourceName b'cord-302735-zal2gr28.txt' === file2bib.sh === id: cord-316097-608qex0d author: Al-Tawfiq, Jaffar A. title: Asymptomatic coronavirus infection: MERS-CoV and SARS-CoV-2 (COVID-19) date: 2020-02-27 pages: extension: .txt txt: ./txt/cord-316097-608qex0d.txt cache: ./cache/cord-316097-608qex0d.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 2 resourceName b'cord-316097-608qex0d.txt' === file2bib.sh === id: cord-281551-0aj2zwx8 author: Schlagenhauf, Patricia title: Repurposing antimalarials and other drugs for COVID-19 date: 2020-04-02 pages: extension: .txt txt: ./txt/cord-281551-0aj2zwx8.txt cache: ./cache/cord-281551-0aj2zwx8.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 2 resourceName b'cord-281551-0aj2zwx8.txt' === file2bib.sh === id: cord-297954-87w2itin author: Memish, Ziad A. title: Middle East respiratory syndrome coronavirus (MERS-CoV): A cluster analysis with implications for global management of suspected cases date: 2015-07-15 pages: extension: .txt txt: ./txt/cord-297954-87w2itin.txt cache: ./cache/cord-297954-87w2itin.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 3 resourceName b'cord-297954-87w2itin.txt' === file2bib.sh === id: cord-277353-qilq1q7h author: Taniguchi, Kiyosu title: Imported infectious diseases and surveillance in Japan date: 2008-09-11 pages: extension: .txt txt: ./txt/cord-277353-qilq1q7h.txt cache: ./cache/cord-277353-qilq1q7h.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 4 resourceName b'cord-277353-qilq1q7h.txt' === file2bib.sh === id: cord-353507-n01ce0x3 author: Dao, Thi Loi title: Controlling the COVID-19 pandemic: Useful lessons from Vietnam date: 2020-07-10 pages: extension: .txt txt: ./txt/cord-353507-n01ce0x3.txt cache: ./cache/cord-353507-n01ce0x3.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 2 resourceName b'cord-353507-n01ce0x3.txt' === file2bib.sh === id: cord-271004-gtmo5ixs author: Al-Tawfiq, Jaffar A. title: Influenza is more common than Middle East Respiratory Syndrome Coronavirus (MERS-CoV) among hospitalized adult Saudi patients date: 2017-10-12 pages: extension: .txt txt: ./txt/cord-271004-gtmo5ixs.txt cache: ./cache/cord-271004-gtmo5ixs.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 3 resourceName b'cord-271004-gtmo5ixs.txt' === file2bib.sh === id: cord-335007-27a3h2lo author: Dreyer, Nancy A. title: Self-reported symptoms from exposure to Covid-19 provide support to clinical diagnosis, triage and prognosis: An exploratory analysis date: 2020-11-03 pages: extension: .txt txt: ./txt/cord-335007-27a3h2lo.txt cache: ./cache/cord-335007-27a3h2lo.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 2 resourceName b'cord-335007-27a3h2lo.txt' === file2bib.sh === id: cord-262454-bccrvapy author: Szente Fonseca, Silvia Nunes title: Risk of Hospitalization for Covid-19 Outpatients Treated with Various Drug Regimens in Brazil: Comparative Analysis date: 2020-10-31 pages: extension: .txt txt: ./txt/cord-262454-bccrvapy.txt cache: ./cache/cord-262454-bccrvapy.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 3 resourceName b'cord-262454-bccrvapy.txt' === file2bib.sh === id: cord-302784-jkjdglns author: Alotaibi, Badriah title: Management of hospitalized drug sensitive pulmonary tuberculosis patients during the Hajj mass gathering: A cross sectional study date: 2019-07-13 pages: extension: .txt txt: ./txt/cord-302784-jkjdglns.txt cache: ./cache/cord-302784-jkjdglns.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 3 resourceName b'cord-302784-jkjdglns.txt' === file2bib.sh === /data-disk/reader-compute/reader-cord/bin/file2bib.sh: fork: retry: No child processes id: cord-338136-nbtkl5cx author: Clemente, Nuria Sanchez title: Geographies of risk: Emerging infectious diseases and travel health data date: 2020-06-25 pages: extension: .txt txt: ./txt/cord-338136-nbtkl5cx.txt cache: ./cache/cord-338136-nbtkl5cx.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 2 resourceName b'cord-338136-nbtkl5cx.txt' === file2bib.sh === id: cord-266313-b518n9dx author: Cao, Yu-chen title: Remdesivir for severe acute respiratory syndrome coronavirus 2 causing COVID-19: An evaluation of the evidence date: 2020-04-02 pages: extension: .txt txt: ./txt/cord-266313-b518n9dx.txt cache: ./cache/cord-266313-b518n9dx.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 3 resourceName b'cord-266313-b518n9dx.txt' === file2bib.sh === id: cord-307464-66eqh79t author: Hwang, Grace M. title: A model-based tool to predict the propagation of infectious disease via airports date: 2012-01-13 pages: extension: .txt txt: ./txt/cord-307464-66eqh79t.txt cache: ./cache/cord-307464-66eqh79t.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 3 resourceName b'cord-307464-66eqh79t.txt' === file2bib.sh === id: cord-340942-oatf59k0 author: Magalhães, Jurandy Júnior Ferraz de title: Epidemiological and clinical characteristics of the first 557 successive patients with COVID-19 in Pernambuco state, Northeast Brazil date: 2020-09-21 pages: extension: .txt txt: ./txt/cord-340942-oatf59k0.txt cache: ./cache/cord-340942-oatf59k0.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 4 resourceName b'cord-340942-oatf59k0.txt' === file2bib.sh === id: cord-341187-jqesw4e8 author: Yu, Xinhua title: Modeling Return of the Epidemic: Impact of Population Structure, Asymptomatic Infection, Case Importation and Personal Contacts date: 2020-08-27 pages: extension: .txt txt: ./txt/cord-341187-jqesw4e8.txt cache: ./cache/cord-341187-jqesw4e8.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 4 resourceName b'cord-341187-jqesw4e8.txt' === file2bib.sh === id: cord-341101-5yvjbr5q author: Hashem, Anwar M. title: Therapeutic use of chloroquine and hydroxychloroquine in COVID-19 and other viral infections: A narrative review date: 2020-05-06 pages: extension: .txt txt: ./txt/cord-341101-5yvjbr5q.txt cache: ./cache/cord-341101-5yvjbr5q.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 4 resourceName b'cord-341101-5yvjbr5q.txt' === file2bib.sh === id: cord-327063-ea7a1xfl author: Dhama, Kuldeep title: SARS-CoV-2 jumping the species barrier: zoonotic lessons from SARS, MERS and recent advances to combat this pandemic virus date: 2020-08-02 pages: extension: .txt txt: ./txt/cord-327063-ea7a1xfl.txt cache: ./cache/cord-327063-ea7a1xfl.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 4 resourceName b'cord-327063-ea7a1xfl.txt' Que is empty; done journal-travelMedInfectDis-cord === reduce.pl bib === === reduce.pl bib === id = cord-029965-bt87kai8 author = Patel, Shailesh Kumar title = The kidney and COVID-19 patients – important considerations date = 2020-08-01 pages = extension = .txt mime = text/plain words = 1049 sentences = 78 flesch = 48 summary = The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) primarily affects the lungs, however, this virus can also affect other organs such as intestine, kidney, heart, and brain [1] [2] [3] . Studies reporting albuminuria and haematuria in the COVID-19 patients along with the detection of viral RNA from the urine samples further support the potential tropism of the SARS-CoV-2 for the renal tissues [4, 12] . Therefore, along with clinical management for pneumonia, potential intervention to protect the kidneys from the virus tropism and cytokine storm must be considered to minimize the mortalities associated with acute renal failure (Figure 1 ). Clinical Characteristics of 138 Hospitalized Patients With 2019 Novel Coronavirus-Infected Pneumonia in Wuhan Coronavirus Disease 19 Infection Does Not Result in Acute Kidney Injury: An Analysis of 116 Hospitalized Patients from Wuhan, China cache = ./cache/cord-029965-bt87kai8.txt txt = ./txt/cord-029965-bt87kai8.txt === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === id = cord-262454-bccrvapy author = Szente Fonseca, Silvia Nunes title = Risk of Hospitalization for Covid-19 Outpatients Treated with Various Drug Regimens in Brazil: Comparative Analysis date = 2020-10-31 pages = extension = .txt mime = text/plain words = 4700 sentences = 249 flesch = 53 summary = With all that, we developed a protocol for early recognition and treatment of high-risk patients (in our population, age greater than 40 years because of generally poorer health standards, or with comorbidities) who would come to our outpatient network of emergency rooms with influenza-like symptoms: fever, cough, myalgia and headache, among others, and receive early treatment, provided to patients at the first doctor visit, using physician discretion from among HCQ, azithromycin, ivermectin, oseltamivir, zinc sulfate, nitazoxanide and prednisone (the last starting on day-6 of symptoms). On March 28, 2020, the FDA issued an emergency use authorization for remdesivir and HCQ for patients in both clinical trials and with severe hospitalized disease (31) . We found early outpatient use of HCQ and prednisone, both as individual prescriptions and used together, to lower the risk of hospitalization in symptomatic high-risk COVID-19 patients presenting for primary care at the emergency rooms of our large HMO in Brazil. cache = ./cache/cord-262454-bccrvapy.txt txt = ./txt/cord-262454-bccrvapy.txt === reduce.pl bib === id = cord-260256-aczn39lf author = Wehrens, Erik title = Primum non nocere: Potential indirect adverse effects of COVID-19 containment strategies in the African region date = 2020-04-29 pages = extension = .txt mime = text/plain words = 418 sentences = 30 flesch = 55 summary = Dear Editor: With the COVID-19 pandemic spreading in sub-Saharan Africa [1] , governments and health authorities are stepping up containment measures. In Sierra Leone, measurements taken include training of healthcare professionals, establishing testing facilities, information campaigns and a partial lockdown. In many ways, there are parallels with the early phase of the West African Ebola outbreak 2013-2016 -including a steep decrease in in-and outpatients across health facilities [2] . In Sierra Leone, which ranks amongst the countries with the highest maternal and child mortality rates worldwide, the rapid decrease of patients presenting to healthcare facilities in this evolving crisis might herald a massive indirect COVID-19-related death toll. Counting indirect crisis-related deaths in the context of a low-resilience health system: the case of maternal and neonatal health during the Ebola epidemic in Sierra Leone Stability issues of RT-PCR testing of SARS-CoV-2 for hospitalized patients clinically diagnosed with COVID-19 cache = ./cache/cord-260256-aczn39lf.txt txt = ./txt/cord-260256-aczn39lf.txt === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === id = cord-268971-4ue58ebz author = Virk, Abinash title = Travel medicine: an American view of the Australian perspective date = 2005-03-03 pages = extension = .txt mime = text/plain words = 1200 sentences = 71 flesch = 45 summary = In the United States, most generalists do not have ready access to some pre-travel vaccines (typhoid and Japanese encephalitis since they would not frequently be used in a typical primary care practice, yellow fever due to certification requirements), and most pre-travel care is provided in specialty clinics mostly staffed by infectious disease physicians. 3 North American primary care providers not specifically trained in travel medicine would be more likely to limit their travel medicine advice to travelers going to settings where vaccination beyond hepatitis A is not needed. In addition, the American Committee on Clinical Tropical Medicine and Travelers, Health (http:// www.astmh.org/subgroup/acctmth.asp) provides a forum for education, certification, networking, and communication for practitioners of travel medicine. Notable differences, however, center on the use of both infectious disease specialists and nurses in North American pre-travel consultations rather than primary care physicians and on the non-union of aviation medicine and travel medicine in the United States. cache = ./cache/cord-268971-4ue58ebz.txt txt = ./txt/cord-268971-4ue58ebz.txt === reduce.pl bib === id = cord-264655-v0v7zsaw author = Kuwahara, Keisuke title = COVID-19: Active measures to support community-dwelling older adults date = 2020-03-20 pages = extension = .txt mime = text/plain words = 515 sentences = 38 flesch = 56 summary = The coronavirus disease 2019 (COVID-19) has rapidly spread around the world [1] , posing enormous health, economic, and social challenges to societies. Social distancing (e.g., cancellation of large gathering, school closures) is an essential part of public health measure for infection control [3] . In line with this, many social events and activities have been cancelled or scaled-down in many countries including Japan, wherein there is already a high number of reported COVID-19 cases [1] . First, communities may not have enough knowledge on whether maintaining, scaling-down, or cancelling social gatherings during the outbreak while minimising health risk. Cancelling social gatherings and scaling down elderly care services can put community-dwelling adults, especially older adults, at an increased risk and severity of social isolation. 3 Although recent technological advances may help detect and provide care for groups at high risk of social isolation, community-dwelling older adults may not have access to smartphones or internet services [5] . cache = ./cache/cord-264655-v0v7zsaw.txt txt = ./txt/cord-264655-v0v7zsaw.txt === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === id = cord-273930-4asx0dq3 author = Ortiz-Martínez, Yeimer title = Pericarditis in a young internal medicine resident with COVID-19 in Colombia date = 2020-08-28 pages = extension = .txt mime = text/plain words = 756 sentences = 46 flesch = 53 summary = As previously stated [1] COVID-19 may also present in them with a broad and changing spectrum of clinical disease, including cardiovascular conditions, as is the case of the pericarditis. During his hospital course, the patient presented severe chest pain that was difficult to relieve, requiring high doses of morphine, with the subsequent change to oxycodone with clinical improvement. Despite the use of PPE by the HCW, including those on training, as the case described, SARS-CoV-2 infection risk is evident, and transmission may occur. Our case also presented with, a still considered novel, clinical manifestation of COVID-19. Although cardiovascular conditions have been reported widely in COVID-19 so far [3, 4] , there is a lack of cases presenting with pericarditis, especially without other significant complications. In the case of COVID-19, this consequence requires more detailed studies to understand their pathophysiology, but especially their clinical course and implications. cache = ./cache/cord-273930-4asx0dq3.txt txt = ./txt/cord-273930-4asx0dq3.txt === reduce.pl bib === === reduce.pl bib === id = cord-266313-b518n9dx author = Cao, Yu-chen title = Remdesivir for severe acute respiratory syndrome coronavirus 2 causing COVID-19: An evaluation of the evidence date = 2020-04-02 pages = extension = .txt mime = text/plain words = 5542 sentences = 262 flesch = 48 summary = China has also taken immediate action to put remdesivir into clinical trials with the purpose of applying it into clinical therapeutics for Corona Virus Disease 2019 (COVID-19). When we set our sights on the broad-spectrum antiviral drugs, we found that a drug unlisted, remdesivir, has demonstrated strength in trials related to MERS-CoV and Ebola virus infection. This article starts from the structure, immunogenicity, and pathogenesis of infection of the SARS-CoV-2, and then analyzes the feasibility of conducting trials and putting into clinical use of COVID-19 from the pharmacological characteristics and successful cases of remdesivir. Remdesivir (GS-5734) is a nucleoside analogues drug (Fig. 3B ) with extensive antiviral activity and effective treatment of lethal Ebola and Nipah virus infections in nonhuman primates [21] . The need of treatment on COVID-19 is urgent, so if the results of clinical trials prove it has the potential to benefit the treatment, according to China's "Compassionate Use", remdesivir will be more immediately used in patients with severe illness. cache = ./cache/cord-266313-b518n9dx.txt txt = ./txt/cord-266313-b518n9dx.txt === reduce.pl bib === id = cord-284477-3mspnc8q author = Kassem, Issmat I. title = Refugees besieged: The lurking threat of COVID-19 in Syrian war refugee camps date = 2020-05-05 pages = extension = .txt mime = text/plain words = 1060 sentences = 58 flesch = 54 summary = Travel Medicine and Infectious Disease requires that all authors sign a declaration of conflicting interests. For example, Lebanon, a country that hosts an estimated 1.5 million Syrian refugees (distributed in makeshift camps and other dwellings) is currently facing a very severe economic crisis, civil unrest (decreased after the pandemic), and a COVID-19 outbreak. In that regard, the UNCHR has appealed for urgent funding to combat COVID-19 in refugee camps, but the results of this initiative remain to be seen [5] . The health of refugees is intimately linked to that of their hosting communities and beyond, which is more reason to protect the camps from COVID-19. First report of the plasmid-borne colistin resistance gene (mcr-1) in Proteus mirabilis isolated from domestic and sewer waters in Syrian refugee camps coli isolated from domestic and sewer waters in Syrian refugee camps in Lebanon cache = ./cache/cord-284477-3mspnc8q.txt txt = ./txt/cord-284477-3mspnc8q.txt === reduce.pl bib === id = cord-281551-0aj2zwx8 author = Schlagenhauf, Patricia title = Repurposing antimalarials and other drugs for COVID-19 date = 2020-04-02 pages = extension = .txt mime = text/plain words = 1433 sentences = 80 flesch = 50 summary = A French paper reporting on the use of drug combinations in infected patients highlighted the possibility that hydroxychloroquine is effective in the treatment of COVID-19 patients [4] particularly in combination with azithromycin. For instance, teicoplanin was proposed as a potential treatment in COVID-19 patients and has already shown inhibitory effects on cell entry of Ebola virus, SARS-CoV and MERS-CoV in the past. However, it has to be acknowledged that in this and other cases, it is a long, expensive and time-consuming way, even if there is an accelerated avenue to expedite promising developments, from in vitro assays indicative of antiviral effects to the initiation steps of safety and efficacy assessments in humans, Finding compounds that can block the entry of the virus into the cell could be an important approach to find potential therapies for COVID-19. In vitro antiviral activity and projection of optimized dosing design of hydroxychloroquine for the treatment of Severe Acute Respiratory Syndrome coronavirus 2 (SARS-CoV-2) cache = ./cache/cord-281551-0aj2zwx8.txt txt = ./txt/cord-281551-0aj2zwx8.txt === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === id = cord-277353-qilq1q7h author = Taniguchi, Kiyosu title = Imported infectious diseases and surveillance in Japan date = 2008-09-11 pages = extension = .txt mime = text/plain words = 2054 sentences = 104 flesch = 42 summary = Shigellosis ranked as the most common imported disease, followed by amebiasis, malaria, enterohemorrhagic Escherichia coli infection and the acquired immunodeficiency syndrome, typhoid fever, dengue fever, hepatitis A, giardiasis, cholera, and paratyphoid fever. Current National Epidemiological Surveillance for Infectious Diseases (NESID) in Japan requires that all notifiable diseases should be reported with the presumptive place of infection. Shigellosis ranked as the most common imported infection, followed by amebiasis, malaria, enterohemorrhagic Escherichia coli (EHEC) infection and the acquired immunodeficiency syndromes (AIDS), typhoid fever, dengue fever, hepatitis A, giardiasis, cholera, and paratyphoid fever. Although the outbreak among group tours to endemic countries was reported to account for the increase of imported diseases, 11 investigation of attributable events or causes were not always made in a timely manner. In this study it was not difficult to overview the situation of imported infectious diseases because the current Japanese surveillance system requires the presumptive place of infection including the specified country if possible. cache = ./cache/cord-277353-qilq1q7h.txt txt = ./txt/cord-277353-qilq1q7h.txt === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === id = cord-271004-gtmo5ixs author = Al-Tawfiq, Jaffar A. title = Influenza is more common than Middle East Respiratory Syndrome Coronavirus (MERS-CoV) among hospitalized adult Saudi patients date = 2017-10-12 pages = extension = .txt mime = text/plain words = 2639 sentences = 163 flesch = 55 summary = title: Influenza is more common than Middle East Respiratory Syndrome Coronavirus (MERS-CoV) among hospitalized adult Saudi patients BACKGROUND: Since the initial description of Middle East Respiratory Syndrome Coronavirus (MERS-CoV), we adopted a systematic process of screening patients admitted with community acquired pneumonia. An observational, laboratory-based study of outbreaks of middle East respiratory syndrome coronavirus in Jeddah and Riyadh, kingdom of Saudi Arabia Epidemiological, demographic, and clinical characteristics of 47 cases of Middle East respiratory syndrome coronavirus disease from Saudi Arabia: a descriptive study Hospital-Associated outbreak of Middle East respiratory syndrome coronavirus: a serologic, epidemiologic, and clinical description Screening for Middle East respiratory syndrome coronavirus infection in hospital patients and their healthcare worker and family contacts: a prospective descriptive study Middle East Respiratory Syndrome-Coronavirus (MERS-CoV): a case-controlstudy of hospitalized patients The critical care response to a hospital outbreak of Middle East respiratory syndrome coronavirus (MERS-CoV) infection: an observational study cache = ./cache/cord-271004-gtmo5ixs.txt txt = ./txt/cord-271004-gtmo5ixs.txt === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === id = cord-302784-jkjdglns author = Alotaibi, Badriah title = Management of hospitalized drug sensitive pulmonary tuberculosis patients during the Hajj mass gathering: A cross sectional study date = 2019-07-13 pages = extension = .txt mime = text/plain words = 4553 sentences = 221 flesch = 52 summary = title: Management of hospitalized drug sensitive pulmonary tuberculosis patients during the Hajj mass gathering: A cross sectional study This study documents the management of drug-sensitive TB patients during Hajj and explores the compliance of healthcare providers with the KSA TB management guidelines in the Ministry of Health (MOH) hospitals in Makkah during the mass gathering. The management of TB patients was documented using a specifically designed data collection form which included patients' demographics data, underlying health conditions and TB risk factors as well as clinical data including various aspects of TB management such as patients' screening, infection prevention and control (IPC), TB diagnosis and treatment and case notification and outcome. The result showed high level of compliance with the assessed TB management guidelines indices for systematic screening of TB suspects as well as IPC and surveillance, but low compliance scores were obtained for prompt TB diagnosis and use of standardized treatment regimen for drug-susceptible TB. cache = ./cache/cord-302784-jkjdglns.txt txt = ./txt/cord-302784-jkjdglns.txt === reduce.pl bib === id = cord-295601-jdtmtjx5 author = Kabir, Mahvish title = COVID-19 pandemic and economic cost; impact on forcibly displaced people date = 2020-04-06 pages = extension = .txt mime = text/plain words = 564 sentences = 40 flesch = 63 summary = authors: Kabir, Mahvish; Afzal, Muhammad Sohail; Khan, Aisha; Ahmed, Haroon title: COVID-19 pandemic and economic cost; impact on forcibly displaced people Travel Medicine and Infectious Disease journal homepage: www.elsevier.com/locate/tmaid COVID-19 pandemic and economic cost; impact on forcibly displaced people Dear Editor, The current outbreak of COVID-19 is estimated to cost $1 trillion to world's economy during year 2020. People in refugee camps are already fighting for basic necessities of life and are currently under high risk of acquiring COVID-19. These refugee camps are mainly monitored and run by UNHCR. Data analysis revealed that 15 top economies of the world are badly hit by this COVID-19 outbreak. This economic crunch will have an effect on donation programs of these countries in coming months. This will further worsen the situation for these displaced people including 37 million children living in these camps [5, 6] . cache = ./cache/cord-295601-jdtmtjx5.txt txt = ./txt/cord-295601-jdtmtjx5.txt === reduce.pl bib === === reduce.pl bib === id = cord-302735-zal2gr28 author = Priyanka title = Aerosol transmission of SARS-CoV-2: The unresolved paradox date = 2020-09-04 pages = extension = .txt mime = text/plain words = 218 sentences = 25 flesch = 59 summary = key: cord-302735-zal2gr28 title: Aerosol transmission of SARS-CoV-2: The unresolved paradox cord_uid: zal2gr28 The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the aetiological agent 18 of coronavirus disease 2019 , has led to a global pandemic defying the 19 geographical borders and putting the lives of billions at risk. The commonly evident 20 symptoms include fever, altered sense of smell and/or taste, cough, sputum expectoration, 21 sore throat, dyspnoea, fatigue and myalgia; whereas the uncommon symptoms include 22 confusion, dizziness, headache, conjunctivitis, rhinorrhoea, nasal congestion, hemoptysis, 23 chest pain, bronchial breath sounds, tachypnoea, crackles/rales on auscultation, cutaneous The transmission of respiratory pathogens have been associated with three primary modes 30 known as "contact," "droplet," and "airborne" transmission. These modes are also being 31 speculated in the context of SARS-CoV-2, but the existing research-based literature and the 32 consequent guidance from the leading public health agencies are still paradoxical. Viable 117 SARS-CoV-2 in the air of a hospital room 1 with COVID-19 patients. Aerosol transmission of SARS-CoV-2? cache = ./cache/cord-302735-zal2gr28.txt txt = ./txt/cord-302735-zal2gr28.txt === reduce.pl bib === id = cord-307464-66eqh79t author = Hwang, Grace M. title = A model-based tool to predict the propagation of infectious disease via airports date = 2012-01-13 pages = extension = .txt mime = text/plain words = 5981 sentences = 263 flesch = 46 summary = Influenza transmission; Susceptible-exposedinfectious-recovered (SEIR) disease-spread modeling; Public health aviation screening; Pandemic response; Points of entry Summary Epidemics of novel or re-emerging infectious diseases have quickly spread globally via air travel, as highlighted by pandemic H1N1 influenza in 2009 (pH1N1). We used a traditional Susceptible-Exposed-Infectious-Recovered (SEIR) model 20, 21 and an illustrative scheduled-flight dataset, to demonstrate how public health authorities could prioritize the allocation of responseresources in the U.S. at point of entry in response to a novel disease that was spreading rapidly outside of North America. To characterize possible patterns and rates of spread for an emerging infectious disease that could enter North America from various geographic points of origin, a prototypical novel pandemic influenza virus was simulated as an example of a human-to-human transmissible disease that is known to spread rapidly via air travel. cache = ./cache/cord-307464-66eqh79t.txt txt = ./txt/cord-307464-66eqh79t.txt === reduce.pl bib === === reduce.pl bib === id = cord-297954-87w2itin author = Memish, Ziad A. title = Middle East respiratory syndrome coronavirus (MERS-CoV): A cluster analysis with implications for global management of suspected cases date = 2015-07-15 pages = extension = .txt mime = text/plain words = 1864 sentences = 105 flesch = 60 summary = title: Middle East respiratory syndrome coronavirus (MERS-CoV): A cluster analysis with implications for global management of suspected cases Since the initial description of the Middle East respiratory syndrome (MERS) in September 2012, a total of 1038 cases of MERS-CoV including 460 deaths have been reported from Saudi Arabia. Contact screening showed positive test in 1 of 56 (1.8%) household contacts, and 3 of 250 (1.2%) HCWs. Summary Since the initial description of the Middle East respiratory syndrome (MERS) in September 2012, a total of 1038 cases of MERS-CoV including 460 deaths have been reported from Saudi Arabia. Since Middle East respiratory syndrome (MERS) was described in September 2012, a total of 1038 cases of MERS-CoV including 460 deaths have been reported from Saudi Arabia [1] . Screening for Middle East respiratory syndrome coronavirus infection in hospital patients and their healthcare worker and family contacts: a prospective descriptive study cache = ./cache/cord-297954-87w2itin.txt txt = ./txt/cord-297954-87w2itin.txt === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === id = cord-327063-ea7a1xfl author = Dhama, Kuldeep title = SARS-CoV-2 jumping the species barrier: zoonotic lessons from SARS, MERS and recent advances to combat this pandemic virus date = 2020-08-02 pages = extension = .txt mime = text/plain words = 11048 sentences = 600 flesch = 48 summary = The present review presents a comprehensive overview of COVID-19 and SARS-CoV-2, with emphasis on the role of animals and their jumping the cross-species barriers, experiences learned from SARSand MERS-CoVs, zoonotic links, and spillover events, transmission to humans and rapid spread, and highlights the new advances in diagnosis, vaccine and therapies, preventive and control measures, one health concept along with recent research developments to counter this pandemic disease. Further research exploring the SARS-CoV-2 associated zoonosis and mechanisms accounting for its initial transmission from animals to humans, will lead to sort out the spread of this virus as well as design and develop appropriate prevention and control strategies to counter COVID-19. The present comprehensive manuscript presents an overview on COVID-19, an emerging SARS-CoV-2 infectious disease while focusing mainly on the events and circumstantial evidences with regards to this virus jumping the species barriers, sharing a few lessons learned from SARS-and MERS-CoVs, zoonotic spillover events (zoonosis), acquiring transmission ability to infect humans, and adopting appropriate preventive and control measures [42] . cache = ./cache/cord-327063-ea7a1xfl.txt txt = ./txt/cord-327063-ea7a1xfl.txt === reduce.pl bib === id = cord-316097-608qex0d author = Al-Tawfiq, Jaffar A. title = Asymptomatic coronavirus infection: MERS-CoV and SARS-CoV-2 (COVID-19) date = 2020-02-27 pages = extension = .txt mime = text/plain words = 600 sentences = 44 flesch = 50 summary = title: Asymptomatic coronavirus infection: MERS-CoV and SARS-CoV-2 (COVID-19) A recent review in this journal showed that an increase in the rate of asymptomatic individuals with the Middle East Respiratory Syndrome Coronavirus (MERS-CoV) increased from 0% to 28.6% [1] . The increase in the number of cases is alarming and brought the fear of having viral transmission from asymptomatic individuals. The contribution of asymptomatic persons with MERS-CoV or SARS-CoV-2 to the transmission is not well characterized. Those asymptomatic cases may play a role in the transmission and thus pose a significant infection control challenge. However, the contribution of asymptomatic cases in the transmission of these viruses is not well known and deserve further studies to examine the extent of occurrence and the role in transmission. Asymptomatic Middle East Respiratory Syndrome Coronavirus (MERS-CoV) infection: extent and implications for infection control: a systematic review Transmission of 2019-nCoV infection from an asymptomatic contact in Germany cache = ./cache/cord-316097-608qex0d.txt txt = ./txt/cord-316097-608qex0d.txt === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === === reduce.pl bib === id = cord-335007-27a3h2lo author = Dreyer, Nancy A. title = Self-reported symptoms from exposure to Covid-19 provide support to clinical diagnosis, triage and prognosis: An exploratory analysis date = 2020-11-03 pages = extension = .txt mime = text/plain words = 2058 sentences = 113 flesch = 44 summary = title: Self-reported symptoms from exposure to Covid-19 provide support to clinical diagnosis, triage and prognosis: An exploratory analysis We identify factors indicating COVID-19 positivity in non-hospitalized patients and prognosticators of moderate-to-severe disease. METHODS: Appeals conducted in April-June 2020 in social media, collaborating medical societies and patient advocacy groups recruited 20,476 participants ≥18 years who believed they had COVID-19 exposure. Volunteers consented on-line and reported height, weight, concomitant illnesses, medication and supplement use, residential, occupational or community COVID-19 exposure, symptoms and symptom severity on a 4-point scale. We build on these models using community-driven research to characterize symptoms indicative of a positive COVID-19 viral test result and identify risk factors for development of serious symptoms of COVID-19 infection outside the hospital setting. Anosmia and ageusia were the most likely symptoms indicative of a positive test results, and participants reporting either of these had more symptoms and of greater severity [8] . cache = ./cache/cord-335007-27a3h2lo.txt txt = ./txt/cord-335007-27a3h2lo.txt === reduce.pl bib === id = cord-340942-oatf59k0 author = Magalhães, Jurandy Júnior Ferraz de title = Epidemiological and clinical characteristics of the first 557 successive patients with COVID-19 in Pernambuco state, Northeast Brazil date = 2020-09-21 pages = extension = .txt mime = text/plain words = 3949 sentences = 225 flesch = 59 summary = METHODS: In this retrospective study, we describe the demographics, epidemiology and clinical features of the first 557 consecutive patients positive for SARS-CoV-2 living in Pernambuco state, Northeast Brazil. Here, we describe for the first time the clinical, epidemiological and demographic features of the first 557 laboratory-confirmed COVID-19 cases in Pernambuco state, Northeast Brazil, who were diagnosed between March 12 and April 22, 2020. Patient epidemiological information, demographic and clinical characteristics, including medical history, signs and symptoms, laboratory findings, underlying co-morbidities, and date of disease onset were obtained from electronic medical records of the Pernambuco Central Public Health Laboratory (LACEN) and analyzed. Regarding the distribution of COVID-19 cases in the different household income ranges (Fig. 1B) , we found that SARS-CoV-2 infections occurred in neighborhoods with greater purchasing power. Here, we described for the first time the epidemiological and clinical characteristics of the first 557 consecutive patients diagnosed with SARS-CoV-2 in the state of Pernambuco between 12 March and April 22, 2020. cache = ./cache/cord-340942-oatf59k0.txt txt = ./txt/cord-340942-oatf59k0.txt === reduce.pl bib === === reduce.pl bib === id = cord-353507-n01ce0x3 author = Dao, Thi Loi title = Controlling the COVID-19 pandemic: Useful lessons from Vietnam date = 2020-07-10 pages = extension = .txt mime = text/plain words = 744 sentences = 54 flesch = 60 summary = title: Controlling the COVID-19 pandemic: Useful lessons from Vietnam Vietnam faces a high risk of a severe COVID-19 outbreak, as the country has a nearly 1,500 km border with China and a large population of nearly 100 million people. Despite limited resources of middle-income country, Vietnam has managed to take the control of the outbreak since the first cases were confirmed more than five months ago. Vietnam is one of the best countries conducting intensive surveillance and lockdown operation for all newly COVID-19-confirmed cases. People in the close contact with the confirmed case, named F1, must undertake testing and government-run quarantine. Multiples effective measures have been key to fight the COVID-19 pandemic in Vietnam to date. An adaptive model of health system organization and responses helped Vietnam to successfully halt the Covid-19 pandemic: What lessons can be learned from a resource-constrained country cache = ./cache/cord-353507-n01ce0x3.txt txt = ./txt/cord-353507-n01ce0x3.txt === reduce.pl bib === id = cord-341101-5yvjbr5q author = Hashem, Anwar M. title = Therapeutic use of chloroquine and hydroxychloroquine in COVID-19 and other viral infections: A narrative review date = 2020-05-06 pages = extension = .txt mime = text/plain words = 4823 sentences = 275 flesch = 43 summary = While approved specific antiviral drugs against SARS-CoV-2 are still lacking, a large number of existing drugs are being explored as a possible treatment for COVID-19 infected patients. In general, studies showed no significant effect of CQ on CoVs including SARS-CoV and feline infectious peritonitis virus (FIPV) replication or clinical scores in mice and cats, respectively [105, 110] . There are very limited published clinical trials that studied the possible antiviral effect of CQ or HCQ in CoV and non-CoV infected patients (Table 5 ). Anti-malaria drug chloroquine is highly effective in treating avian influenza A H5N1 virus infection in an animal model In vitro antiviral activity and projection of optimized dosing design of hydroxychloroquine for the treatment of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Hydroxychloroquine, a less toxic derivative of chloroquine, is effective in inhibiting SARS-CoV-2 infection in vitro cache = ./cache/cord-341101-5yvjbr5q.txt txt = ./txt/cord-341101-5yvjbr5q.txt === reduce.pl bib === id = cord-341187-jqesw4e8 author = Yu, Xinhua title = Modeling Return of the Epidemic: Impact of Population Structure, Asymptomatic Infection, Case Importation and Personal Contacts date = 2020-08-27 pages = extension = .txt mime = text/plain words = 3797 sentences = 217 flesch = 47 summary = title: Modeling Return of the Epidemic: Impact of Population Structure, Asymptomatic Infection, Case Importation and Personal Contacts J o u r n a l P r e -p r o o f 7 We investigate the impact of population structure, case importation, asymptomatic cases, and the number of contacts on a possible second wave of epidemic through mathematical modelling. Methods: we built a modified Susceptible-exposed-Infectious-Removed (SEIR) model with parameters mirroring those of the COVID-19 pandemic and reported simulated characteristics of epidemics for incidence, hospitalizations and deaths under different scenarios. Methods: we built a modified Susceptible-exposed-Infectious-Removed (SEIR) model with parameters mirroring those of the COVID-19 pandemic and reported simulated characteristics of epidemics for incidence, hospitalizations and deaths under different scenarios. Epidemic model simulation has been used extensively to estimate essential epidemic parameters, In this study, we will build a modified Susceptible-Exposed-Infectious-Removed (SEIR) model [27] to simulate the COVID-19 pandemic and investigate the impact of population structure, asymptomatic cases, case importation, and the number of contacts on the epidemic progression. cache = ./cache/cord-341187-jqesw4e8.txt txt = ./txt/cord-341187-jqesw4e8.txt === reduce.pl bib === id = cord-338136-nbtkl5cx author = Clemente, Nuria Sanchez title = Geographies of risk: Emerging infectious diseases and travel health data date = 2020-06-25 pages = extension = .txt mime = text/plain words = 1149 sentences = 60 flesch = 42 summary = Reflecting on the findings of Petridou and colleagues, 1 describing imported ZIKV cases to the UK between 2016-2018, confirmed at the Rare and Imported Pathogens Laboratory, we look back to the 2015-2017 Zika virus (ZIKV) pandemic and reflect on some of the opportunities and limitations presented by data obtained from returning travellers in enhancing understanding of emerging infectious diseases. Given travellers' well-defined temporal windows of potential exposure, improved recollections of risk behaviors, and access to well-resourced travel clinic laboratories, travel health data are uniquely positioned to provide insights into the pathogenesis of emergent infectious diseases. While travel health data has the opportunity to build on this foundation and provide novel insights about emerging infectious agents, the fastest progress will be made through meaningful bi-directional international partnerships built on respectful collaboration, commitments to capacity building, and cooperative efforts to bolster surveillance. Travel Medicine and Infectious Disease requires that all authors sign a declaration of conflicting interests. Travel Medicine and Infectious Disease requires that all authors sign a declaration of conflicting interests. cache = ./cache/cord-338136-nbtkl5cx.txt txt = ./txt/cord-338136-nbtkl5cx.txt ===== Reducing email addresses cord-295601-jdtmtjx5 Creating transaction Updating adr table ===== Reducing keywords cord-029965-bt87kai8 cord-006968-1gua1abq cord-254717-1hwdd7nq cord-259106-nrg1960d cord-260256-aczn39lf cord-262454-bccrvapy cord-259966-szkiilb1 cord-257099-8k28vkgf cord-264655-v0v7zsaw cord-255560-c8s9f12f cord-261303-xjbz9fw9 cord-268971-4ue58ebz cord-269759-1n1oo6wc cord-264127-t7w407it cord-268519-t15yvy5s cord-266313-b518n9dx cord-271004-gtmo5ixs cord-275605-mbiojk39 cord-281551-0aj2zwx8 cord-263968-v9sncm4l cord-273930-4asx0dq3 cord-270684-e7xnugdd cord-276839-kxfxybq4 cord-284477-3mspnc8q cord-286654-sox98pp3 cord-284028-l0r7f9sr cord-287159-bjccnp7u cord-277353-qilq1q7h cord-286029-rafcdzhm cord-291025-u5z8zji3 cord-288270-x1j0r9jk cord-292513-7mhd4wzk cord-302784-jkjdglns cord-295601-jdtmtjx5 cord-307460-v6xgkg1p cord-302735-zal2gr28 cord-297954-87w2itin cord-307464-66eqh79t cord-313546-rlq4v0ca cord-310149-8idvf79g cord-312691-ynh84b98 cord-311979-l1iw6449 cord-314421-j5psma9i cord-320893-bgn04zh3 cord-321720-5sfwyn9g cord-314609-83t1je92 cord-311011-xzfnzbcf cord-323622-229kub7c cord-316097-608qex0d cord-324345-j43rpvwk cord-314607-bcocsjij cord-328056-y5x80tuw cord-327063-ea7a1xfl cord-337713-uuo1oeyc cord-325069-wxdkao69 cord-335007-27a3h2lo cord-340094-u3x4g8ul cord-353507-n01ce0x3 cord-340942-oatf59k0 cord-341101-5yvjbr5q cord-339444-f8lfob47 cord-341187-jqesw4e8 cord-338136-nbtkl5cx Creating transaction Updating wrd table ===== Reducing urls cord-259106-nrg1960d cord-268971-4ue58ebz cord-275605-mbiojk39 cord-266313-b518n9dx cord-287159-bjccnp7u cord-284028-l0r7f9sr cord-291025-u5z8zji3 cord-292513-7mhd4wzk cord-307464-66eqh79t cord-314421-j5psma9i cord-340094-u3x4g8ul cord-325069-wxdkao69 cord-302784-jkjdglns cord-341187-jqesw4e8 cord-340942-oatf59k0 Creating transaction Updating url table ===== Reducing named entities cord-029965-bt87kai8 cord-006968-1gua1abq cord-254717-1hwdd7nq cord-259966-szkiilb1 cord-259106-nrg1960d cord-260256-aczn39lf cord-257099-8k28vkgf cord-263968-v9sncm4l cord-261303-xjbz9fw9 cord-268971-4ue58ebz cord-262454-bccrvapy cord-268519-t15yvy5s cord-266313-b518n9dx cord-264655-v0v7zsaw cord-270684-e7xnugdd cord-264127-t7w407it cord-255560-c8s9f12f cord-271004-gtmo5ixs cord-269759-1n1oo6wc cord-273930-4asx0dq3 cord-276839-kxfxybq4 cord-275605-mbiojk39 cord-277353-qilq1q7h cord-281551-0aj2zwx8 cord-287159-bjccnp7u cord-284477-3mspnc8q cord-284028-l0r7f9sr cord-292513-7mhd4wzk cord-286654-sox98pp3 cord-288270-x1j0r9jk cord-286029-rafcdzhm cord-291025-u5z8zji3 cord-295601-jdtmtjx5 cord-307460-v6xgkg1p cord-302784-jkjdglns cord-302735-zal2gr28 cord-297954-87w2itin cord-307464-66eqh79t cord-313546-rlq4v0ca cord-312691-ynh84b98 cord-310149-8idvf79g cord-311011-xzfnzbcf cord-314421-j5psma9i cord-311979-l1iw6449 cord-314609-83t1je92 cord-321720-5sfwyn9g cord-323622-229kub7c cord-320893-bgn04zh3 cord-316097-608qex0d cord-324345-j43rpvwk cord-314607-bcocsjij cord-327063-ea7a1xfl cord-325069-wxdkao69 cord-328056-y5x80tuw cord-337713-uuo1oeyc cord-339444-f8lfob47 cord-335007-27a3h2lo cord-340094-u3x4g8ul cord-353507-n01ce0x3 cord-340942-oatf59k0 cord-341187-jqesw4e8 cord-338136-nbtkl5cx cord-341101-5yvjbr5q Creating transaction Updating ent table ===== Reducing parts of speech cord-029965-bt87kai8 cord-259106-nrg1960d cord-255560-c8s9f12f cord-260256-aczn39lf cord-254717-1hwdd7nq cord-264655-v0v7zsaw cord-006968-1gua1abq cord-259966-szkiilb1 cord-257099-8k28vkgf cord-263968-v9sncm4l cord-264127-t7w407it cord-262454-bccrvapy cord-268519-t15yvy5s cord-269759-1n1oo6wc cord-268971-4ue58ebz cord-273930-4asx0dq3 cord-271004-gtmo5ixs cord-261303-xjbz9fw9 cord-270684-e7xnugdd cord-266313-b518n9dx cord-276839-kxfxybq4 cord-284477-3mspnc8q cord-277353-qilq1q7h cord-281551-0aj2zwx8 cord-295601-jdtmtjx5 cord-275605-mbiojk39 cord-286654-sox98pp3 cord-287159-bjccnp7u cord-284028-l0r7f9sr cord-292513-7mhd4wzk cord-288270-x1j0r9jk cord-286029-rafcdzhm cord-302735-zal2gr28 cord-307460-v6xgkg1p cord-302784-jkjdglns cord-297954-87w2itin cord-310149-8idvf79g cord-291025-u5z8zji3 cord-311979-l1iw6449 cord-311011-xzfnzbcf cord-307464-66eqh79t cord-314609-83t1je92 cord-321720-5sfwyn9g cord-314421-j5psma9i cord-323622-229kub7c cord-316097-608qex0d cord-328056-y5x80tuw cord-324345-j43rpvwk cord-337713-uuo1oeyc cord-314607-bcocsjij cord-340094-u3x4g8ul cord-339444-f8lfob47 cord-335007-27a3h2lo cord-353507-n01ce0x3 cord-325069-wxdkao69 cord-313546-rlq4v0ca cord-312691-ynh84b98 cord-320893-bgn04zh3 cord-338136-nbtkl5cx cord-340942-oatf59k0 cord-341187-jqesw4e8 cord-341101-5yvjbr5q cord-327063-ea7a1xfl Creating transaction Updating pos table Building ./etc/reader.txt cord-327063-ea7a1xfl cord-262454-bccrvapy cord-340942-oatf59k0 cord-327063-ea7a1xfl cord-271004-gtmo5ixs cord-312691-ynh84b98 number of items: 63 sum of words: 62,714 average size in words: 2,613 average readability score: 51 nouns: patients; cases; study; disease; infection; influenza; pilgrims; coronavirus; virus; health; outbreak; risk; symptoms; data; transmission; infections; time; countries; pandemic; case; number; days; people; control; treatment; diseases; studies; travel; rate; epidemic; population; travelers; hospital; care; fever; years; gatherings; syndrome; information; results; model; cough; use; patient; measures; age; pneumonia; authors; viruses; healthcare verbs: reported; included; used; showed; infect; based; associated; found; confirmed; increased; provides; travel; returning; testing; followed; occur; presenting; emerging; considered; developed; take; identified; caused; spreading; imported; reduce; required; related; gave; defined; treating; known; hospitalized; affects; leading; suspected; controlled; performed; suggested; need; make; compare; recommended; remains; received; detect; acquired; indicate; admitted; become adjectives: respiratory; clinical; severe; infectious; high; public; viral; human; acute; covid-19; novel; international; first; asymptomatic; global; early; symptomatic; common; medical; many; different; positive; non; new; higher; available; potential; possible; large; current; mass; significant; low; pre; religious; infected; recent; key; specific; previous; effective; epidemiological; antiviral; important; similar; lower; initial; general; young; local adverbs: also; however; well; even; especially; significantly; still; respectively; therefore; furthermore; already; particularly; just; recently; now; much; yet; highly; first; almost; previously; often; approximately; less; prior; later; worldwide; far; similarly; rapidly; mainly; least; frequently; alone; nevertheless; hence; currently; rather; statistically; relatively; likely; initially; finally; clinically; specifically; globally; moreover; immediately; eventually; clearly pronouns: we; it; their; our; its; they; i; my; them; she; her; he; me; his; you; us; themselves; itself; myself; one; yr; your; yro1; u; ours; himself; herself; a104d0245d5300da286463398a1bacecd71a174e proper nouns: SARS; Hajj; COVID-19; MERS; CoV-2; CoV; TB; China; Coronavirus; Health; Saudi; East; Middle; Arabia; H1N1; Wuhan; Fig; HCQ; World; remdesivir; March; Disease; Med; U.S.; CQ; Syndrome; Respiratory; Iran; sha; Organization; Umrah; Ebola; April; A; YouTube; KSA; Infectious; Brazil; Table; United; ILI; States; Influenza; America; ACE2; RNA; PCR; Medicine; CoVs; Africa keywords: covid-19; sars; hajj; mers; hcq; china; umrah; respiratory; pilgrim; patient; libya; iran; hiv; ebola; east; disease; zikv; world; virus; vietnam; unhcr; u.s.; traveler; travel; temperature; study; spring; social; singapore; sierra; religious; refugee; point; period; participant; outbreak; mass; march; mandarin; ksa; kong; jean; japanese; influenza; infectious; ili; human; hong; health; h1n1 one topic; one dimension: covid file(s): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7395611/ titles(s): The kidney and COVID-19 patients – important considerations three topics; one dimension: cov; cases; covid file(s): https://api.elsevier.com/content/article/pii/S1477893920303264, https://www.sciencedirect.com/science/article/pii/S1477893918301315, https://www.sciencedirect.com/science/article/pii/S1477893920304026?v=s5 titles(s): SARS-CoV-2 jumping the species barrier: zoonotic lessons from SARS, MERS and recent advances to combat this pandemic virus | From the “Madding Crowd” to mass gatherings-religion, sport, culture and public health | Risk of Hospitalization for Covid-19 Outpatients Treated with Various Drug Regimens in Brazil: Comparative Analysis five topics; three dimensions: sars cov covid; cases disease health; hajj pilgrims respiratory; covid patients risk; virus covid patients file(s): https://api.elsevier.com/content/article/pii/S1477893920303264, https://www.sciencedirect.com/science/article/pii/S1477893918301315, https://doi.org/10.1016/j.tmaid.2018.12.002, https://www.sciencedirect.com/science/article/pii/S1477893920304026?v=s5, https://www.ncbi.nlm.nih.gov/pubmed/32387694/ titles(s): SARS-CoV-2 jumping the species barrier: zoonotic lessons from SARS, MERS and recent advances to combat this pandemic virus | From the “Madding Crowd” to mass gatherings-religion, sport, culture and public health | Clinical respiratory infections and pneumonia during the Hajj pilgrimage: A systematic review | Risk of Hospitalization for Covid-19 Outpatients Treated with Various Drug Regimens in Brazil: Comparative Analysis | Therapeutic use of chloroquine and hydroxychloroquine in COVID-19 and other viral infections: A narrative review Type: cord title: journal-travelMedInfectDis-cord date: 2021-05-30 time: 16:05 username: emorgan patron: Eric Morgan email: emorgan@nd.edu input: facet_journal:"Travel Med Infect Dis" ==== make-pages.sh htm files ==== make-pages.sh complex files ==== make-pages.sh named enities ==== making bibliographics id: cord-263968-v9sncm4l author: Ahmed, Anwar E. title: Incidence of coronavirus disease (COVID-19) and countries affected by malarial infections date: 2020-04-22 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.sciencedirect.com/science/article/pii/S1477893920301617 doi: 10.1016/j.tmaid.2020.101693 id: cord-261303-xjbz9fw9 author: Ahmed, Qanta A. title: From the “Madding Crowd” to mass gatherings-religion, sport, culture and public health date: 2018-06-04 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: Human behavior has long engaged in collective behavior assembling in crowds. The Christian pilgrimage to the Holy Land has been recorded since the 4th century, while the Hajj, Islam's great pilgrimage, has existed for fourteen centuries, of which a body of literature devoted to the travelogues of the Hajj has been recorded for over ten centuries. Football is a sport played worldwide by more than 1.5 million teams and in 300,000 clubs. Most however play outside of the officially organized sphere: more than 4 percent of the global population plays football, including 270 million amateur players. Assembling for specific events is a uniquely human behavior, though the formal study of crowds did not begin until the mid-Twentieth Century. Today Mass Gathering Medicine focuses on the public health challenges to hosting events attended by a large enough number of people, at a specific site, for a defined period of time, likely to strain both the planning and response to the mass gathering of a community, state, or nation. All of us can recall attending a mass gathering, whether it be watching one's favorite rock group in performance or assembling for religious pilgrimage. Certainly, the event itself is transporting and transforming and the unison of behaviors and activities can be enormously enriching, uplifting and overwhelming, just as much as they may be at times dangerous and high risk. This review seeks to draw contrasts and comparisons between sporting gatherings and religious gatherings with a chief focus on Hajj, among the largest of all mass gatherings today. We will find there are some powerful similarities as well as stark differences. Each bequeaths a legacy which can inform the other and, as we make our observations, we join with you and the legions of other investigators who continue to remain fascinated and enthralled by mass gatherings which are among the most beloved and beholden events of modern humanity. url: https://www.sciencedirect.com/science/article/pii/S1477893918301315 doi: 10.1016/j.tmaid.2018.06.001 id: cord-314421-j5psma9i author: Ahmed, Qanta A. title: The cancellation of mass gatherings (MGs)? Decision making in the time of COVID-19 date: 2020-03-14 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: Our recommendation, as experts who have monitored health hazards at the Hajj for over 15 years, especially if the situation with COVID-19 continues to escalate globally is that Hajj 2020 will be at risk of being suspended and a means for Muslims to fulfill their rights in the future either personally or even by proxy need to be announced. The same holds true for the Summer 2020 Olympics in Japan and for many other MGs and large gatherings. Decisions in the time of COVID-19 will be closely followed and will be a blueprint for other mass gatherings. url: https://api.elsevier.com/content/article/pii/S1477893920300995 doi: 10.1016/j.tmaid.2020.101631 id: cord-254717-1hwdd7nq author: Al-Tawfiq, Jaffar A. title: Remdesivir as a possible therapeutic option for the COVID-19 date: 2020-03-05 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.ncbi.nlm.nih.gov/pubmed/32145386/ doi: 10.1016/j.tmaid.2020.101615 id: cord-271004-gtmo5ixs author: Al-Tawfiq, Jaffar A. title: Influenza is more common than Middle East Respiratory Syndrome Coronavirus (MERS-CoV) among hospitalized adult Saudi patients date: 2017-10-12 words: 2639.0 sentences: 163.0 pages: flesch: 55.0 cache: ./cache/cord-271004-gtmo5ixs.txt txt: ./txt/cord-271004-gtmo5ixs.txt summary: title: Influenza is more common than Middle East Respiratory Syndrome Coronavirus (MERS-CoV) among hospitalized adult Saudi patients BACKGROUND: Since the initial description of Middle East Respiratory Syndrome Coronavirus (MERS-CoV), we adopted a systematic process of screening patients admitted with community acquired pneumonia. An observational, laboratory-based study of outbreaks of middle East respiratory syndrome coronavirus in Jeddah and Riyadh, kingdom of Saudi Arabia Epidemiological, demographic, and clinical characteristics of 47 cases of Middle East respiratory syndrome coronavirus disease from Saudi Arabia: a descriptive study Hospital-Associated outbreak of Middle East respiratory syndrome coronavirus: a serologic, epidemiologic, and clinical description Screening for Middle East respiratory syndrome coronavirus infection in hospital patients and their healthcare worker and family contacts: a prospective descriptive study Middle East Respiratory Syndrome-Coronavirus (MERS-CoV): a case-controlstudy of hospitalized patients The critical care response to a hospital outbreak of Middle East respiratory syndrome coronavirus (MERS-CoV) infection: an observational study abstract: BACKGROUND: Since the initial description of Middle East Respiratory Syndrome Coronavirus (MERS-CoV), we adopted a systematic process of screening patients admitted with community acquired pneumonia. Here, we report the result of the surveillance activity in a general hospital in Saudi Arabia over a four year period. MATERIALS AND METHODS: All admitted patients with community acquired pneumonia from 2012 to 2016 were tested for MERS-CoV. In addition, testing for influenza viruses was carried out starting April 2015. RESULTS: During the study period, a total of 2657 patients were screened for MERS-CoV and only 20 (0.74%) tested positive. From January 2015 to December 2016, a total of 1644 patients were tested for both MERS-CoV and influenza. None of the patients tested positive for MERS-CoV and 271 (16.4%) were positive for influenza. The detected influenza viruses were Influenza A (107, 6.5%), pandemic 2009 H1N1 (n = 120, 7.3%), and Influenza B (n = 44, 2.7%). Pandemic H1N1 was the most common influenza in 2015 with a peak in peaked October to December and influenza A other than H1N1 was more common in 2016 with a peak in August and then October to December. CONCLUSIONS: MERS-CoV was a rare cause of community acquired pneumonia and other viral causes including influenza were much more common. Thus, admitted patients are potentially manageable with Oseltamivir or Zanamivir therapy. url: https://www.ncbi.nlm.nih.gov/pubmed/29031867/ doi: 10.1016/j.tmaid.2017.10.004 id: cord-316097-608qex0d author: Al-Tawfiq, Jaffar A. title: Asymptomatic coronavirus infection: MERS-CoV and SARS-CoV-2 (COVID-19) date: 2020-02-27 words: 600.0 sentences: 44.0 pages: flesch: 50.0 cache: ./cache/cord-316097-608qex0d.txt txt: ./txt/cord-316097-608qex0d.txt summary: title: Asymptomatic coronavirus infection: MERS-CoV and SARS-CoV-2 (COVID-19) A recent review in this journal showed that an increase in the rate of asymptomatic individuals with the Middle East Respiratory Syndrome Coronavirus (MERS-CoV) increased from 0% to 28.6% [1] . The increase in the number of cases is alarming and brought the fear of having viral transmission from asymptomatic individuals. The contribution of asymptomatic persons with MERS-CoV or SARS-CoV-2 to the transmission is not well characterized. Those asymptomatic cases may play a role in the transmission and thus pose a significant infection control challenge. However, the contribution of asymptomatic cases in the transmission of these viruses is not well known and deserve further studies to examine the extent of occurrence and the role in transmission. Asymptomatic Middle East Respiratory Syndrome Coronavirus (MERS-CoV) infection: extent and implications for infection control: a systematic review Transmission of 2019-nCoV infection from an asymptomatic contact in Germany abstract: nan url: https://www.ncbi.nlm.nih.gov/pubmed/32114075/ doi: 10.1016/j.tmaid.2020.101608 id: cord-302784-jkjdglns author: Alotaibi, Badriah title: Management of hospitalized drug sensitive pulmonary tuberculosis patients during the Hajj mass gathering: A cross sectional study date: 2019-07-13 words: 4553.0 sentences: 221.0 pages: flesch: 52.0 cache: ./cache/cord-302784-jkjdglns.txt txt: ./txt/cord-302784-jkjdglns.txt summary: title: Management of hospitalized drug sensitive pulmonary tuberculosis patients during the Hajj mass gathering: A cross sectional study This study documents the management of drug-sensitive TB patients during Hajj and explores the compliance of healthcare providers with the KSA TB management guidelines in the Ministry of Health (MOH) hospitals in Makkah during the mass gathering. The management of TB patients was documented using a specifically designed data collection form which included patients'' demographics data, underlying health conditions and TB risk factors as well as clinical data including various aspects of TB management such as patients'' screening, infection prevention and control (IPC), TB diagnosis and treatment and case notification and outcome. The result showed high level of compliance with the assessed TB management guidelines indices for systematic screening of TB suspects as well as IPC and surveillance, but low compliance scores were obtained for prompt TB diagnosis and use of standardized treatment regimen for drug-susceptible TB. abstract: BACKGROUND: To document the management of drug-sensitive TB patients during the Hajj and assess compliance with the Saudi TB management guidelines. METHOD: The study was conducted in hospitals in Makkah during the 2016 and 2017 Hajj seasons. Structured questionnaire was used to collect data on relevant indices on TB management and a scoring system was developed to assess compliance with guidelines. RESULTS: Data was collected from 31 TB cases, 65.4% (17/26) were Saudi residents. Sputum culture was the only diagnostic test applied in 67.7% (21/31) of patients. Most (96.8%, 30/31) confirmed TB cases were isolated, but only 12.9% (4/28) were tested for HIV and merely 37% (10/27) received the recommended four 1st-line anti-TB drugs. Guideline compliance scores were highest for infection prevention and control and surveillance (9.6/10) and identifying TB suspects (7.2/10). The least scores were obtained for treating TB (5.0/10) and diagnosing TB (3.0/10). CONCLUSIONS: Healthcare providers training and supervision are paramount to improve their knowledge and skill and ensure their compliance with existing TB management guidelines. However, there may be a need for the introduction of an international policy/guideline for TB control and management during mass gatherings such as the Hajj to guide providers’ choices and facilitate monitoring. url: https://doi.org/10.1016/j.tmaid.2019.07.007 doi: 10.1016/j.tmaid.2019.07.007 id: cord-310149-8idvf79g author: Antinori, Spinello title: SARS-COV-2 infection: Across the border into the family date: 2020-06-09 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.sciencedirect.com/science/article/pii/S147789392030274X?v=s5 doi: 10.1016/j.tmaid.2020.101784 id: cord-255560-c8s9f12f author: Arab-Mazar, Zahra title: Mapping the incidence of the COVID-19 hotspot in Iran – Implications for Travellers date: 2020-03-14 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://doi.org/10.1016/j.tmaid.2020.101630 doi: 10.1016/j.tmaid.2020.101630 id: cord-275605-mbiojk39 author: Benkouiten, Samir title: Clinical respiratory infections and pneumonia during the Hajj pilgrimage: A systematic review date: 2018-12-04 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: BACKGROUND: The Islamic Hajj pilgrimage to Mecca is one of the world's largest annual mass gatherings. Inevitable overcrowding during the pilgrims' stay greatly increases the risk of acquiring and spreading infectious diseases, especially respiratory diseases. METHOD: The MEDLINE/PubMed and Scopus databases were searched for all relevant papers published prior to February 2018 that evaluated the prevalence of clinical symptoms of respiratory infections, including pneumonia, among Hajj pilgrims, as well as their influenza and pneumococcal vaccination status. RESULTS: A total of 61 papers were included in the review. Both cohort- and hospital-based studies provide complementary data, and both are therefore necessary to provide a complete picture of the total burden of respiratory diseases during the Hajj. Respiratory symptoms have been common among Hajj pilgrims over the last 15 years. In cohorts of pilgrims, cough ranged from 1.9% to 91.5%. However, the prevalence rates of the most common symptoms (cough, sore throat, and subjective fever) of influenza-like illness (ILI) varied widely across the included studies. These studies have shown variable results, with overall rates of ILI ranging from 8% to 78.2%. These differences might result from differences in study design, study period, and rates of vaccination against seasonal influenza that ranged from 1.1% to 100% among study participants. Moreover, the definition of ILI was inconsistent across studies. In hospitalized Hajj pilgrims, the prevalence of pneumonia, that remains a major concern in critically ill patients, ranged from 0.2% to 54.8%. CONCLUSIONS: Large multinational follow-up studies are recommended for clinic-based syndromic surveillance, in conjunction with microbiological surveillance. Matched cohorts ensure better comparability across studies. However, study design and data collection procedures should be standardized to facilitate reporting and to achieve comparability between studies. Furthermore, the definition of ILI, and of most common symptoms used to define respiratory infections (e.g., upper respiratory tract infection), need to be precisely defined and consistently used. Future studies need to address potential effect of influenza and pneumococcal vaccine in the context of the Hajj pilgrimage. url: https://doi.org/10.1016/j.tmaid.2018.12.002 doi: 10.1016/j.tmaid.2018.12.002 id: cord-313546-rlq4v0ca author: Bielecki, Michel title: Body temperature screening to identify SARS-CoV-2 infected young adult travellers is ineffective date: 2020-08-05 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://doi.org/10.1016/j.tmaid.2020.101832 doi: 10.1016/j.tmaid.2020.101832 id: cord-339444-f8lfob47 author: Bigna, Jean Joel title: Claims about the safety and efficacy of early treatment of COVID-19 with hydroxychloroquine and azithromycin must be supported by real evidence date: 2020-09-25 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.ncbi.nlm.nih.gov/pubmed/32980540/ doi: 10.1016/j.tmaid.2020.101886 id: cord-286029-rafcdzhm author: Bogaards, Johannes Antonie title: The potential of targeted antibody prophylaxis in SARS outbreak control: A mathematic analysis() date: 2006-05-05 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: BACKGROUND: Severe acute respiratory syndrome (SARS) coronavirus-like viruses continue to circulate in animal reservoirs. If new mutants of SARS coronavirus do initiate another epidemic, administration of prophylactic antibodies to risk groups may supplement the stringent isolation procedures that contained the first SARS outbreak. METHOD: We developed a mathematical model to investigate the effects of hospital admission and targeted antibody prophylaxis on the reproduction number R, defined as the number of secondary cases generated by an index case, during different SARS outbreak scenarios. RESULTS: Assuming a basic reproduction number R(0)=3, admission of patients to hospital within 4.3 days of symptom onset is necessary to achieve outbreak control without the need to further reduce community-based transmission. Control may be enhanced by providing pre-exposure prophylaxis to contacts of hospitalized patients, and through contact tracing and provision of post-exposure prophylaxis. Antibody prophylaxis may also be employed to reduce R below one and thereby restrict outbreak size and duration. CONCLUSIONS: Patient isolation alone can be sufficient to control SARS outbreaks provided that the time from onset to admission is short. Antibody prophylaxis as supplemental measure generally allows for containment of higher R(0) values and restricts both the size and duration of an outbreak. url: https://api.elsevier.com/content/article/pii/S1477893906000202 doi: 10.1016/j.tmaid.2006.01.007 id: cord-266313-b518n9dx author: Cao, Yu-chen title: Remdesivir for severe acute respiratory syndrome coronavirus 2 causing COVID-19: An evaluation of the evidence date: 2020-04-02 words: 5542.0 sentences: 262.0 pages: flesch: 48.0 cache: ./cache/cord-266313-b518n9dx.txt txt: ./txt/cord-266313-b518n9dx.txt summary: China has also taken immediate action to put remdesivir into clinical trials with the purpose of applying it into clinical therapeutics for Corona Virus Disease 2019 (COVID-19). When we set our sights on the broad-spectrum antiviral drugs, we found that a drug unlisted, remdesivir, has demonstrated strength in trials related to MERS-CoV and Ebola virus infection. This article starts from the structure, immunogenicity, and pathogenesis of infection of the SARS-CoV-2, and then analyzes the feasibility of conducting trials and putting into clinical use of COVID-19 from the pharmacological characteristics and successful cases of remdesivir. Remdesivir (GS-5734) is a nucleoside analogues drug (Fig. 3B ) with extensive antiviral activity and effective treatment of lethal Ebola and Nipah virus infections in nonhuman primates [21] . The need of treatment on COVID-19 is urgent, so if the results of clinical trials prove it has the potential to benefit the treatment, according to China''s "Compassionate Use", remdesivir will be more immediately used in patients with severe illness. abstract: The novel coronavirus infection that initially found at the end of 2019 has attracted great attention. So far, the number of infectious cases has increased globally to more than 100 thousand and the outbreak has been defined as a pandemic situation, but there are still no “specific drug” available. Relevant reports have pointed out the novel coronavirus has 80% homology with SARS. In the difficulty where new synthesized drug cannot be applied immediately to patients, “conventional drug in new use” becomes a feasible solution. The first medication experience of the recovered patients in the US has led remdesivir to be the “specific drug”. China has also taken immediate action to put remdesivir into clinical trials with the purpose of applying it into clinical therapeutics for Corona Virus Disease 2019 (COVID-19). We started from the structure, immunogenicity, and pathogenesis of coronavirus infections of the novel coronavirus. Further, we analyzed the pharmacological actions and previous trials of remdesivir to identify the feasibility of conducting experiments on COVID-19. url: https://www.ncbi.nlm.nih.gov/pubmed/32247927/ doi: 10.1016/j.tmaid.2020.101647 id: cord-311011-xzfnzbcf author: Chen, Juan title: Travel rush during Chinese Spring Festival and the 2019-nCoV date: 2020-04-22 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://doi.org/10.1016/j.tmaid.2020.101686 doi: 10.1016/j.tmaid.2020.101686 id: cord-311979-l1iw6449 author: Cimolai, Nevio title: More data are required for incubation period, infectivity, and quarantine duration for COVID-19 date: 2020-04-27 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://api.elsevier.com/content/article/pii/S1477893920301812 doi: 10.1016/j.tmaid.2020.101713 id: cord-338136-nbtkl5cx author: Clemente, Nuria Sanchez title: Geographies of risk: Emerging infectious diseases and travel health data date: 2020-06-25 words: 1149.0 sentences: 60.0 pages: flesch: 42.0 cache: ./cache/cord-338136-nbtkl5cx.txt txt: ./txt/cord-338136-nbtkl5cx.txt summary: Reflecting on the findings of Petridou and colleagues, 1 describing imported ZIKV cases to the UK between 2016-2018, confirmed at the Rare and Imported Pathogens Laboratory, we look back to the 2015-2017 Zika virus (ZIKV) pandemic and reflect on some of the opportunities and limitations presented by data obtained from returning travellers in enhancing understanding of emerging infectious diseases. Given travellers'' well-defined temporal windows of potential exposure, improved recollections of risk behaviors, and access to well-resourced travel clinic laboratories, travel health data are uniquely positioned to provide insights into the pathogenesis of emergent infectious diseases. While travel health data has the opportunity to build on this foundation and provide novel insights about emerging infectious agents, the fastest progress will be made through meaningful bi-directional international partnerships built on respectful collaboration, commitments to capacity building, and cooperative efforts to bolster surveillance. Travel Medicine and Infectious Disease requires that all authors sign a declaration of conflicting interests. Travel Medicine and Infectious Disease requires that all authors sign a declaration of conflicting interests. abstract: nan url: https://doi.org/10.1016/j.tmaid.2020.101806 doi: 10.1016/j.tmaid.2020.101806 id: cord-353507-n01ce0x3 author: Dao, Thi Loi title: Controlling the COVID-19 pandemic: Useful lessons from Vietnam date: 2020-07-10 words: 744.0 sentences: 54.0 pages: flesch: 60.0 cache: ./cache/cord-353507-n01ce0x3.txt txt: ./txt/cord-353507-n01ce0x3.txt summary: title: Controlling the COVID-19 pandemic: Useful lessons from Vietnam Vietnam faces a high risk of a severe COVID-19 outbreak, as the country has a nearly 1,500 km border with China and a large population of nearly 100 million people. Despite limited resources of middle-income country, Vietnam has managed to take the control of the outbreak since the first cases were confirmed more than five months ago. Vietnam is one of the best countries conducting intensive surveillance and lockdown operation for all newly COVID-19-confirmed cases. People in the close contact with the confirmed case, named F1, must undertake testing and government-run quarantine. Multiples effective measures have been key to fight the COVID-19 pandemic in Vietnam to date. An adaptive model of health system organization and responses helped Vietnam to successfully halt the Covid-19 pandemic: What lessons can be learned from a resource-constrained country abstract: nan url: https://api.elsevier.com/content/article/pii/S1477893920303185 doi: 10.1016/j.tmaid.2020.101822 id: cord-288270-x1j0r9jk author: Daw, Mohamed A. title: Preliminary epidemiological analysis of suspected cases of corona virus infection in Libya date: 2020-03-20 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://doi.org/10.1016/j.tmaid.2020.101634 doi: 10.1016/j.tmaid.2020.101634 id: cord-314609-83t1je92 author: Daw, Mohamed A. title: Corona virus infection in Syria, Libya and Yemen; an alarming devastating threat date: 2020-04-02 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.ncbi.nlm.nih.gov/pubmed/32247929/ doi: 10.1016/j.tmaid.2020.101652 id: cord-327063-ea7a1xfl author: Dhama, Kuldeep title: SARS-CoV-2 jumping the species barrier: zoonotic lessons from SARS, MERS and recent advances to combat this pandemic virus date: 2020-08-02 words: 11048.0 sentences: 600.0 pages: flesch: 48.0 cache: ./cache/cord-327063-ea7a1xfl.txt txt: ./txt/cord-327063-ea7a1xfl.txt summary: The present review presents a comprehensive overview of COVID-19 and SARS-CoV-2, with emphasis on the role of animals and their jumping the cross-species barriers, experiences learned from SARSand MERS-CoVs, zoonotic links, and spillover events, transmission to humans and rapid spread, and highlights the new advances in diagnosis, vaccine and therapies, preventive and control measures, one health concept along with recent research developments to counter this pandemic disease. Further research exploring the SARS-CoV-2 associated zoonosis and mechanisms accounting for its initial transmission from animals to humans, will lead to sort out the spread of this virus as well as design and develop appropriate prevention and control strategies to counter COVID-19. The present comprehensive manuscript presents an overview on COVID-19, an emerging SARS-CoV-2 infectious disease while focusing mainly on the events and circumstantial evidences with regards to this virus jumping the species barriers, sharing a few lessons learned from SARS-and MERS-CoVs, zoonotic spillover events (zoonosis), acquiring transmission ability to infect humans, and adopting appropriate preventive and control measures [42] . abstract: Coronavirus Disease 2019 (COVID-19), caused by SARS-CoV-2 (Severe Acute Respiratory Syndrome - Coronavirus-2) of the family Coronaviridae, appeared in China in December 2019. This disease was declared as posing Public Health International Emergency by World Health Organization on January 30, 2020, attained the status of a very high-risk category on February 29, and now having a pandemic status (March 11). COVID-19 has presently spread to more than 215 countries/territories while killing nearly 0.62 million humans out of cumulative confirmed infected asymptomatic or symptomatic cases accounting to almost 15 million as of July 22, 2020, within a short period of just a few months. Researchers worldwide are pacing with high efforts to counter the spread of this virus and to design effective vaccines and therapeutics/drugs. Few of the studies have shown the potential of the animal-human interface and zoonotic links in the origin of SARS-CoV-2. Exploring the possible zoonosis and revealing the factors responsible for its initial transmission from animals to humans will pave ways to design and implement effective preventive and control strategies to counter the COVID-19. The present review presents a comprehensive overview of COVID-19 and SARS-CoV-2, with emphasis on the role of animals and their jumping the cross-species barriers, experiences learned from SARS- and MERS-CoVs, zoonotic links, and spillover events, transmission to humans and rapid spread, and highlights the new advances in diagnosis, vaccine and therapies, preventive and control measures, one health concept along with recent research developments to counter this pandemic disease. url: https://api.elsevier.com/content/article/pii/S1477893920303264 doi: 10.1016/j.tmaid.2020.101830 id: cord-335007-27a3h2lo author: Dreyer, Nancy A. title: Self-reported symptoms from exposure to Covid-19 provide support to clinical diagnosis, triage and prognosis: An exploratory analysis date: 2020-11-03 words: 2058.0 sentences: 113.0 pages: flesch: 44.0 cache: ./cache/cord-335007-27a3h2lo.txt txt: ./txt/cord-335007-27a3h2lo.txt summary: title: Self-reported symptoms from exposure to Covid-19 provide support to clinical diagnosis, triage and prognosis: An exploratory analysis We identify factors indicating COVID-19 positivity in non-hospitalized patients and prognosticators of moderate-to-severe disease. METHODS: Appeals conducted in April-June 2020 in social media, collaborating medical societies and patient advocacy groups recruited 20,476 participants ≥18 years who believed they had COVID-19 exposure. Volunteers consented on-line and reported height, weight, concomitant illnesses, medication and supplement use, residential, occupational or community COVID-19 exposure, symptoms and symptom severity on a 4-point scale. We build on these models using community-driven research to characterize symptoms indicative of a positive COVID-19 viral test result and identify risk factors for development of serious symptoms of COVID-19 infection outside the hospital setting. Anosmia and ageusia were the most likely symptoms indicative of a positive test results, and participants reporting either of these had more symptoms and of greater severity [8] . abstract: BACKGROUND: Symptomatic COVID-19 is prevalent in the community. We identify factors indicating COVID-19 positivity in non-hospitalized patients and prognosticators of moderate-to-severe disease. METHODS: Appeals conducted in April-June 2020 in social media, collaborating medical societies and patient advocacy groups recruited 20,476 participants ≥18 years who believed they had COVID-19 exposure. Volunteers consented on-line and reported height, weight, concomitant illnesses, medication and supplement use, residential, occupational or community COVID-19 exposure, symptoms and symptom severity on a 4-point scale. Of the 12,117 curated analytic population 2,279 reported a COVID-19 viral test result: 865 positive (COVID+) and 1,414 negative (COVID-). RESULTS: The triad of anosmia, ageusia and fever best distinguished COVID+ from COVID-participants (OR 6.07, 95% CI: 4.39 to 8.47). COVID+ subjects with BMI≥30, concomitant respiratory disorders or an organ transplant had increased risk of moderate-to- severe dyspnoea. Race and anti-autoimmunity medication did not affect moderate-to-severe dyspnea risk. CONCLUSIONS: The triad of anosmia, ageusia and fever differentiates COVID-19. Elevated risks of severe symptoms outside the hospital were most evident among the obese and those with pulmonary comorbidity. Race and use of medication for autoimmune disease did not predict severe disease. These findings should facilitate rapid COVID-19 diagnosis and triage in settings without testing. TRIAL REGISTRATION: Clinicaltrials.gov NCT04368065, EU PAS register EUPAS36240. url: https://www.sciencedirect.com/science/article/pii/S1477893920304051?v=s5 doi: 10.1016/j.tmaid.2020.101909 id: cord-276839-kxfxybq4 author: Dursun, Zehra Beştepe title: COVID-19 among Turkish citizens returning from abroad date: 2020-09-01 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.ncbi.nlm.nih.gov/pubmed/32889103/ doi: 10.1016/j.tmaid.2020.101860 id: cord-340094-u3x4g8ul author: D’Alò, Gian Loreto title: Microbial contamination of the surface of mobile phones and implications for the containment of the Covid-19 pandemic date: 2020-09-02 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://api.elsevier.com/content/article/pii/S1477893920303665 doi: 10.1016/j.tmaid.2020.101870 id: cord-264127-t7w407it author: Fakhar-e-Alam Kulyar, Muhammad title: Psychosocial impact of COVID-19 outbreak on international students living in Hubei province, China date: 2020-04-26 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.sciencedirect.com/science/article/pii/S1477893920301800 doi: 10.1016/j.tmaid.2020.101712 id: cord-257099-8k28vkgf author: Fan, Jingchun title: The epidemiology of reverse transmission of COVID-19 in Gansu Province, China date: 2020-05-12 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: BACKGROUND: The transmission of COVID-19 is about to come under control within China, however, an emerging challenge to the Chinese authorities is reverse transmission due to COVID-19 patients/carriers evacuating from overseas to China. METHODS: We analysed the epidemiological characteristics of 311 Chinese citizens evacuated from Iran. All confirmed COVID-19 cases amongst the returnees were displayed by the spatial distribution pattern of the extent of COVID-19 infection. RESULTS: Characteristics that differed significantly amongst these returnees compared to the original infected cohorts in Gansu were mean age, occupation and sex. Differences observed between infected patients and non-patients amongst returnees were age, sex, race, occupation, the use of facemasks, and residential situation in Iran. The clinical features that were significantly related to infection were chill, shortness of breath, chest pain and nausea. Spatial distribution pattern analysis indicated that infected returnees had resided within Iranian provinces that had experienced high levels of COVID-19. The spatial distribution of the original homes of these returnees before departure for Iran demonstrated that returnees will largely return to northwest China, to regions that have only experienced low levels of infection within China. CONCLUSION: Blocking the reverse transmission of COVID-19 is critical in preventing a secondary outbreak of COVID-19. url: https://api.elsevier.com/content/article/pii/S1477893920302209 doi: 10.1016/j.tmaid.2020.101741 id: cord-259966-szkiilb1 author: Gautret, Philippe title: International mass gatherings and travel-associated illness: A GeoSentinel cross-sectional, observational study date: 2019-11-09 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: BACKGROUND: Travelers to international mass gatherings may be exposed to conditions which increase their risk of acquiring infectious diseases. Most existing data come from single clinical sites seeing returning travelers, or relate to single events. METHODS: Investigators evaluated ill travelers returning from a mass gathering, and presenting to a GeoSentinel site between August 2015 and April 2019, and collected data on the nature of the event and the relation between final diagnoses and the mass gathering. RESULTS: Of 296 ill travelers, 51% were female and the median age was 54 years (range: 1–88). Over 82% returned from a religious mass gathering, most frequently Umrah or Hajj. Only 3% returned from the Olympics in Brazil or South Korea. Other mass gatherings included other sporting events, cultural or entertainment events, and conferences. Respiratory diseases accounted for almost 80% of all diagnoses, with vaccine preventable illnesses such as influenza and pneumonia accounting for 26% and 20% of all diagnoses respectively. This was followed by gastrointestinal illnesses, accounting for 4.5%. Sixty-three percent of travelers reported having a pre-travel encounter with a healthcare provider. CONCLUSIONS: Despite this surveillance being limited to patients presenting to GeoSentinel sites, our findings highlight the importance of respiratory diseases at mass gatherings, the need for pre-travel consultations before mass gatherings, and consideration of vaccination against influenza and pneumococcal disease. url: https://www.sciencedirect.com/science/article/pii/S147789391930208X doi: 10.1016/j.tmaid.2019.101504 id: cord-286654-sox98pp3 author: Gautret, Philippe title: The inevitable Hajj cough: Surveillance data in French pilgrims, 2012–2014 date: 2015-10-03 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: BACKGROUND: Respiratory tract infections are the most common infection affecting Hajj pilgrims, and the ‘‘Hajj cough’’ is considered by pilgrims almost de rigueur. METHODS: French pilgrims were recruited between January 2012–December 2014 and information on demographics, medical history, compliance with preventive measures and health problems during travel were collected. RESULTS: A total of 382 pilgrims were included with 39.3% aged ≥65 years and 55.1% suffering from a chronic disease, most frequently hypertension and diabetes. The prevalence of cough was 80.9% and a high proportion presented with associated sore throat (91.0%), rhinitis (78.7%) and hoarseness (63.0%). Myalgia was reported in 48.3% of cases and subjective fever in 47.3%. The incubation time of respiratory symptoms was 7.7 days (range 0–25 days) and 51.9% of pilgrims presenting with a cough during their stay were still symptomatic on return. Among pilgrims with a cough, 69.4% took antibiotics. The prevalence of cough was significantly higher among females than men, but age, chronic conditions and preventive measures had no significant effect. CONCLUSIONS: The Hajj cough is highly common, likely a result of crowded conditions at religious places. Pilgrims should be advised to carry symptomatic relief for the Hajj cough such as cough suppressant, soothing throat lozenges and paracetamol. Use of antibiotics should be discouraged. url: https://www.sciencedirect.com/science/article/pii/S1477893915001519 doi: 10.1016/j.tmaid.2015.09.008 id: cord-321720-5sfwyn9g author: Hanscheid, Thomas title: Coronavirus 2019-nCoV: Is the genie already out of the bottle? date: 2020-02-07 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.ncbi.nlm.nih.gov/pubmed/32044388/ doi: 10.1016/j.tmaid.2020.101577 id: cord-341101-5yvjbr5q author: Hashem, Anwar M. title: Therapeutic use of chloroquine and hydroxychloroquine in COVID-19 and other viral infections: A narrative review date: 2020-05-06 words: 4823.0 sentences: 275.0 pages: flesch: 43.0 cache: ./cache/cord-341101-5yvjbr5q.txt txt: ./txt/cord-341101-5yvjbr5q.txt summary: While approved specific antiviral drugs against SARS-CoV-2 are still lacking, a large number of existing drugs are being explored as a possible treatment for COVID-19 infected patients. In general, studies showed no significant effect of CQ on CoVs including SARS-CoV and feline infectious peritonitis virus (FIPV) replication or clinical scores in mice and cats, respectively [105, 110] . There are very limited published clinical trials that studied the possible antiviral effect of CQ or HCQ in CoV and non-CoV infected patients (Table 5 ). Anti-malaria drug chloroquine is highly effective in treating avian influenza A H5N1 virus infection in an animal model In vitro antiviral activity and projection of optimized dosing design of hydroxychloroquine for the treatment of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Hydroxychloroquine, a less toxic derivative of chloroquine, is effective in inhibiting SARS-CoV-2 infection in vitro abstract: The rapidly spreading Coronavirus Disease (COVID-19) pandemic, caused by the severe acute respiratory syndrome coronavirus (SARS-CoV-2), represents an unprecedented serious challenge to the global public health community. The extremely rapid international spread of the disease with significant morbidity and mortality made finding possible therapeutic interventions a global priority. While approved specific antiviral drugs against SARS-CoV-2 are still lacking, a large number of existing drugs are being explored as a possible treatment for COVID-19 infected patients. Recent publications have re-examined the use of Chloroquine (CQ) and/or Hydroxychloroquine (HCQ) as a potential therapeutic option for these patients. In an attempt to explore the evidence that supports their use in COVID-19 patients, we comprehensively reviewed the previous studies which used CQ or HCQ as an antiviral treatment. Both CQ and HCQ demonstrated promising in vitro results, however, such data have not yet been translated into meaningful in vivo studies. While few clinical trials have suggested some beneficial effects of CQ and HCQ in COVID-19 patients, most of the reported data are still preliminary. Given the current uncertainty, it is worth being mindful of the potential risks and strictly rational the use of these drugs in COVID-19 patients until further high quality randomized clinical trials are available to clarify their role in the treatment or prevention of COVID-19. url: https://www.ncbi.nlm.nih.gov/pubmed/32387694/ doi: 10.1016/j.tmaid.2020.101735 id: cord-307460-v6xgkg1p author: Hsu, Yu-Lung title: Temperature and the difference in impact of SARS CoV-2 infection (COVID-19) between tropical and non-tropical regions in Taiwan date: 2020-06-13 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.ncbi.nlm.nih.gov/pubmed/32544431/ doi: 10.1016/j.tmaid.2020.101790 id: cord-307464-66eqh79t author: Hwang, Grace M. title: A model-based tool to predict the propagation of infectious disease via airports date: 2012-01-13 words: 5981.0 sentences: 263.0 pages: flesch: 46.0 cache: ./cache/cord-307464-66eqh79t.txt txt: ./txt/cord-307464-66eqh79t.txt summary: Influenza transmission; Susceptible-exposedinfectious-recovered (SEIR) disease-spread modeling; Public health aviation screening; Pandemic response; Points of entry Summary Epidemics of novel or re-emerging infectious diseases have quickly spread globally via air travel, as highlighted by pandemic H1N1 influenza in 2009 (pH1N1). We used a traditional Susceptible-Exposed-Infectious-Recovered (SEIR) model 20, 21 and an illustrative scheduled-flight dataset, to demonstrate how public health authorities could prioritize the allocation of responseresources in the U.S. at point of entry in response to a novel disease that was spreading rapidly outside of North America. To characterize possible patterns and rates of spread for an emerging infectious disease that could enter North America from various geographic points of origin, a prototypical novel pandemic influenza virus was simulated as an example of a human-to-human transmissible disease that is known to spread rapidly via air travel. abstract: Epidemics of novel or re-emerging infectious diseases have quickly spread globally via air travel, as highlighted by pandemic H1N1 influenza in 2009 (pH1N1). Federal, state, and local public health responders must be able to plan for and respond to these events at aviation points of entry. The emergence of a novel influenza virus and its spread to the United States were simulated for February 2009 from 55 international metropolitan areas using three basic reproduction numbers (R(0)): 1.53, 1.70, and 1.90. Empirical data from the pH1N1 virus were used to validate our SEIR model. Time to entry to the U.S. during the early stages of a prototypical novel communicable disease was predicted based on the aviation network patterns and the epidemiology of the disease. For example, approximately 96% of origins (R(0) of 1.53) propagated a disease into the U.S. in under 75 days, 90% of these origins propagated a disease in under 50 days. An R(0) of 1.53 reproduced the pH1NI observations. The ability to anticipate the rate and location of disease introduction into the U.S. provides greater opportunity to plan responses based on the scenario as it is unfolding. This simulation tool can aid public health officials to assess risk and leverage resources efficiently. url: https://www.ncbi.nlm.nih.gov/pubmed/22245113/ doi: 10.1016/j.tmaid.2011.12.003 id: cord-270684-e7xnugdd author: Iken, Oluwatomi title: COVID-19: Travel health and the implications for sub -Saharan Africa date: 2020-04-09 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://doi.org/10.1016/j.tmaid.2020.101645 doi: 10.1016/j.tmaid.2020.101645 id: cord-295601-jdtmtjx5 author: Kabir, Mahvish title: COVID-19 pandemic and economic cost; impact on forcibly displaced people date: 2020-04-06 words: 564.0 sentences: 40.0 pages: flesch: 63.0 cache: ./cache/cord-295601-jdtmtjx5.txt txt: ./txt/cord-295601-jdtmtjx5.txt summary: authors: Kabir, Mahvish; Afzal, Muhammad Sohail; Khan, Aisha; Ahmed, Haroon title: COVID-19 pandemic and economic cost; impact on forcibly displaced people Travel Medicine and Infectious Disease journal homepage: www.elsevier.com/locate/tmaid COVID-19 pandemic and economic cost; impact on forcibly displaced people Dear Editor, The current outbreak of COVID-19 is estimated to cost $1 trillion to world''s economy during year 2020. People in refugee camps are already fighting for basic necessities of life and are currently under high risk of acquiring COVID-19. These refugee camps are mainly monitored and run by UNHCR. Data analysis revealed that 15 top economies of the world are badly hit by this COVID-19 outbreak. This economic crunch will have an effect on donation programs of these countries in coming months. This will further worsen the situation for these displaced people including 37 million children living in these camps [5, 6] . abstract: nan url: https://www.sciencedirect.com/science/article/pii/S1477893920301290 doi: 10.1016/j.tmaid.2020.101661 id: cord-291025-u5z8zji3 author: Karami, Parisa title: Mortality of a pregnant patient diagnosed with COVID-19: A case report with clinical, radiological, and histopathological findings date: 2020-04-11 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: This report highlights details on a pregnant case of COVID-19 who unfortunately did not survive. This 27-year-old woman at her 30 and 3/7 weeks’ gestation was referred to our center with fever, myalgia, and cough. The laboratory investigations showed leukopenia and lymphopenia as well as increased creatinine and CRP levels. The first chest X-ray (faint bilateral patchy opacities) and CT scan (some faint subpleural ground-glass opacities associated with pleural thickening) were not typical for initial COVID-19 pulmonary infection, however, the treatment for COVID-19 was started. Due to respiratory distress, she was intubated and put under mechanical ventilation. After a while, the fetus was born with Apgar score of 0 and did not react to the neonatal cardiopulmonary resuscitation protocol. Finally, due to deterioration in the clinical and imaging findings, the patient was expired as a result of multi-organ failure. Following the death, autopsy was performed and the histopathologic evaluations of the lungs showed evidence of viral pneumonia (viral cytopathic effect and a mild increase in alveolar wall thickness) and ARDS (hyaline membrane). Also, reverse transcription-polymerase chain reaction (RT-PCR) confirmed SARS-CoV-2 infection in the lungs. To our knowledge, this is the first report of maternal death with confirmed COVID-19 infection. url: https://www.sciencedirect.com/science/article/pii/S1477893920301332 doi: 10.1016/j.tmaid.2020.101665 id: cord-284477-3mspnc8q author: Kassem, Issmat I. title: Refugees besieged: The lurking threat of COVID-19 in Syrian war refugee camps date: 2020-05-05 words: 1060.0 sentences: 58.0 pages: flesch: 54.0 cache: ./cache/cord-284477-3mspnc8q.txt txt: ./txt/cord-284477-3mspnc8q.txt summary: Travel Medicine and Infectious Disease requires that all authors sign a declaration of conflicting interests. For example, Lebanon, a country that hosts an estimated 1.5 million Syrian refugees (distributed in makeshift camps and other dwellings) is currently facing a very severe economic crisis, civil unrest (decreased after the pandemic), and a COVID-19 outbreak. In that regard, the UNCHR has appealed for urgent funding to combat COVID-19 in refugee camps, but the results of this initiative remain to be seen [5] . The health of refugees is intimately linked to that of their hosting communities and beyond, which is more reason to protect the camps from COVID-19. First report of the plasmid-borne colistin resistance gene (mcr-1) in Proteus mirabilis isolated from domestic and sewer waters in Syrian refugee camps coli isolated from domestic and sewer waters in Syrian refugee camps in Lebanon abstract: nan url: https://doi.org/10.1016/j.tmaid.2020.101736 doi: 10.1016/j.tmaid.2020.101736 id: cord-325069-wxdkao69 author: Khatri, Priyanka title: YouTube as source of information on 2019 novel coronavirus outbreak: a cross sectional study of English and Mandarin content date: 2020-03-20 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: BACKGROUND: The current 2019 novel coronavirus outbreak is rapidly evolving. YouTube has been recognized as a popular source of information in previous disease outbreaks. We analyzed the content on YouTube about n-CoV in English and Mandarin languages. METHODS: YouTube was searched using the terms ‘2019 novel coronavirus’, ‘Wuhan virus’ and ‘武汉病毒’ (Mandarin for Wuhan virus) on 1st and 2nd February 2020. First 50 videos in each group were analyzed. Videos in other languages, duplicate videos, those without an audio and duration >15 min were excluded .72 videos in English and 42 in Mandarin were reviewed. 2 reviewers classified the videos as useful, misleading or news based on pre specified criterion. Inter-observer agreement was evaluated with kappa coefficient. Modified DISCERN index for reliability and medical information and content index (MICI) score were used for content analysis. RESULTS: These videos attracted cumulative 21,288,856 views. 67% of English and 50% Mandarin videos had useful information. The viewership of misleading Mandarin videos was higher than the useful ones. WHO accounted for only 4% of useful videos. Mean DISCERN score for reliability was 3.12/5 and 3.25/5 for English and Mandarin videos respectively. Mean cumulative MICI score of useful videos was low (6.71/25 for English and 6.28/25 for Mandarin). CONCLUSIONS: YouTube viewership during 2019 n-CoV outbreak is higher than previous outbreaks. The medical content of videos is suboptimal International health agencies are underrepresented. Given its popularity, YouTube should be considered as important platform for information dissemination. url: https://doi.org/10.1016/j.tmaid.2020.101636 doi: 10.1016/j.tmaid.2020.101636 id: cord-264655-v0v7zsaw author: Kuwahara, Keisuke title: COVID-19: Active measures to support community-dwelling older adults date: 2020-03-20 words: 515.0 sentences: 38.0 pages: flesch: 56.0 cache: ./cache/cord-264655-v0v7zsaw.txt txt: ./txt/cord-264655-v0v7zsaw.txt summary: The coronavirus disease 2019 (COVID-19) has rapidly spread around the world [1] , posing enormous health, economic, and social challenges to societies. Social distancing (e.g., cancellation of large gathering, school closures) is an essential part of public health measure for infection control [3] . In line with this, many social events and activities have been cancelled or scaled-down in many countries including Japan, wherein there is already a high number of reported COVID-19 cases [1] . First, communities may not have enough knowledge on whether maintaining, scaling-down, or cancelling social gatherings during the outbreak while minimising health risk. Cancelling social gatherings and scaling down elderly care services can put community-dwelling adults, especially older adults, at an increased risk and severity of social isolation. 3 Although recent technological advances may help detect and provide care for groups at high risk of social isolation, community-dwelling older adults may not have access to smartphones or internet services [5] . abstract: nan url: https://www.ncbi.nlm.nih.gov/pubmed/32205272/ doi: 10.1016/j.tmaid.2020.101638 id: cord-284028-l0r7f9sr author: Lee, Chi-Wei title: A loophole in international quarantine procedures disclosed during the SARS crisis date: 2004-12-30 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: This study describes a loophole in the international quarantine system during the recent Asian severe acute respiratory syndrome (SARS) outbreak. Specifically, that of travelers disguising symptoms of respiratory tract infection at international airports, in order to board aircraft to return to their home countries—notwithstanding the infection risks this involves to others. High medical fees for treatment to non-residents in epidemic areas were found to be the main cause for this behaviour. This phenomenon revealed a loophole in the control mechanisms of international quarantine procedures, letting travelers carrying a highly contagious virus slip by undetected and causing possible multi-country outbreaks of communicable diseases. Clinical evidence collected from medical records at medical centers can highlight this oversight. url: https://www.sciencedirect.com/science/article/pii/S1477893904001267 doi: 10.1016/j.tmaid.2004.10.002 id: cord-324345-j43rpvwk author: Leong, Hoe Nam title: SARS – My personal battle date: 2010-11-19 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: It isn’t every day that a doctor becomes a patient. It is more peculiar when it occurs with an unknown mysterious epidemic respiratory illness that kills. Severe acute respiratory syndrome (SARS) gripped the world in 2003, spreading via air-links and throwing the global economy into disarray. As a practicing physician in Singapore, one of the first countries affected, I describe my first-hand account of my battle with this illness, how I acquired this illness in Singapore, and eventually quarantine in Frankfurt am Main, Germany. url: https://doi.org/10.1016/j.tmaid.2010.10.007 doi: 10.1016/j.tmaid.2010.10.007 id: cord-340942-oatf59k0 author: Magalhães, Jurandy Júnior Ferraz de title: Epidemiological and clinical characteristics of the first 557 successive patients with COVID-19 in Pernambuco state, Northeast Brazil date: 2020-09-21 words: 3949.0 sentences: 225.0 pages: flesch: 59.0 cache: ./cache/cord-340942-oatf59k0.txt txt: ./txt/cord-340942-oatf59k0.txt summary: METHODS: In this retrospective study, we describe the demographics, epidemiology and clinical features of the first 557 consecutive patients positive for SARS-CoV-2 living in Pernambuco state, Northeast Brazil. Here, we describe for the first time the clinical, epidemiological and demographic features of the first 557 laboratory-confirmed COVID-19 cases in Pernambuco state, Northeast Brazil, who were diagnosed between March 12 and April 22, 2020. Patient epidemiological information, demographic and clinical characteristics, including medical history, signs and symptoms, laboratory findings, underlying co-morbidities, and date of disease onset were obtained from electronic medical records of the Pernambuco Central Public Health Laboratory (LACEN) and analyzed. Regarding the distribution of COVID-19 cases in the different household income ranges (Fig. 1B) , we found that SARS-CoV-2 infections occurred in neighborhoods with greater purchasing power. Here, we described for the first time the epidemiological and clinical characteristics of the first 557 consecutive patients diagnosed with SARS-CoV-2 in the state of Pernambuco between 12 March and April 22, 2020. abstract: BACKGROUND: South America is the current epicenter of COVID-19 pandemic. Yet, the epidemiological and clinical features of the disease have not been described in Brazil, the third most affected country in the world. METHODS: In this retrospective study, we describe the demographics, epidemiology and clinical features of the first 557 consecutive patients positive for SARS-CoV-2 living in Pernambuco state, Northeast Brazil. RESULTS: The first COVID-19 cases occurred in the high income population. The age of infected patients ranged from 27 days to 97 years with a median of 47 years. The ratio of males to female in the SARS-CoV-2-infected group was 0.83:1. The most common symptom was cough (74.51%), followed by fever (66.79%), dyspnea (56.01%), sore throat (28.19%) and O(2) saturation <95% (24.42%). 86.44% of the lethal cases were patients older than 51 years. The median time from illness onset to diagnosis was 4.0 days (range 0–39 days) Severe patients diagnosed after 14 days of symptoms onset had higher viral load than patients with mild disease. CONCLUSIONS: Our study provides important information about COVID-19 in the tropics and will assist physicians and health officials to face the current pandemics as SARS-CoV-2 continues to spread in the human population. url: https://www.ncbi.nlm.nih.gov/pubmed/32971239/ doi: 10.1016/j.tmaid.2020.101884 id: cord-297954-87w2itin author: Memish, Ziad A. title: Middle East respiratory syndrome coronavirus (MERS-CoV): A cluster analysis with implications for global management of suspected cases date: 2015-07-15 words: 1864.0 sentences: 105.0 pages: flesch: 60.0 cache: ./cache/cord-297954-87w2itin.txt txt: ./txt/cord-297954-87w2itin.txt summary: title: Middle East respiratory syndrome coronavirus (MERS-CoV): A cluster analysis with implications for global management of suspected cases Since the initial description of the Middle East respiratory syndrome (MERS) in September 2012, a total of 1038 cases of MERS-CoV including 460 deaths have been reported from Saudi Arabia. Contact screening showed positive test in 1 of 56 (1.8%) household contacts, and 3 of 250 (1.2%) HCWs. Summary Since the initial description of the Middle East respiratory syndrome (MERS) in September 2012, a total of 1038 cases of MERS-CoV including 460 deaths have been reported from Saudi Arabia. Since Middle East respiratory syndrome (MERS) was described in September 2012, a total of 1038 cases of MERS-CoV including 460 deaths have been reported from Saudi Arabia [1] . Screening for Middle East respiratory syndrome coronavirus infection in hospital patients and their healthcare worker and family contacts: a prospective descriptive study abstract: Since the initial description of the Middle East respiratory syndrome (MERS) in September 2012, a total of 1038 cases of MERS-CoV including 460 deaths have been reported from Saudi Arabia. From August 24, 2013 to September 3, 2013, a total of 397 patients and contacts were tested for MERS-CoV. Of those tested, there were 18 (4.5%) MERS-CoV cases reported in Al-Madinah al-Munawwarah with one large cluster. In this report, we describe the outcome, epidemiology and clinical characteristics of this cluster of which 4 cases involved healthcare workers. Fourteen cases appeared to be linked to one cluster involving healthcare workers (HCWs), family and patient contacts. Of the 18 cases, five (including 2 HCWs) were community acquired, two were household contacts, and 11 were healthcare associated (including 4 HCWs). All except 4 cases were symptomatic and the case fatality rate was 39% (7 of 18). The outbreak resulted in human to human transmission of an estimated 6 cases. Contact screening showed positive test in 1 of 56 (1.8%) household contacts, and 3 of 250 (1.2%) HCWs. url: https://www.sciencedirect.com/science/article/pii/S1477893915001131 doi: 10.1016/j.tmaid.2015.06.012 id: cord-314607-bcocsjij author: Memish, Ziad A. title: The prevalance of respiratory viruses among healthcare workers serving pilgrims in Makkah during the 2009 influenza A (H1N1) pandemic date: 2011-12-23 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: Despite the high risk of acquiring respiratory infections, healthcare workers who treat pilgrims at Hajj have not been studied in previous research on respiratory diseases during Hajj. The objective of this study was to determine the prevalence of different respiratory viruses among healthcare workers who treated pilgrims during Hajj 2009, the year of the influenza A H1N1 pandemic. A cross-sectional study was performed just before and after Hajj (25–29 November, 2009). Nasal and throat swabs were tested for 18 respiratory virus types and subtypes. A total of 184 healthcare workers were examined. Most were men (85%) with an average age of 41 years. Before the Hajj, rates of seasonal influenza vaccination were higher (51%) than rates of pandemic influenza A H1N1 vaccination (22%). After the Hajj, participants reported high rates of maintaining hand hygiene (98%), cough etiquette (89%), and wearing a face mask (90%). Among all the viruses tested, only two were detected: rhinovirus was detected in 12.6% and Coronavirus 229E in 0.6%. Rhinovirus was detected in 21% of those who had respiratory symptoms during Hajj. Influenza A (including H1N1), influenza B. respiratory syncytial virus, other coronaviruses, parainfluenza viruses, human metapneumovirus, adenovirus, and human bocavirus were not detected. The finding of high rates of rhinovirus infection corresponds to their frequent occurrence in adults. None of the participants had influenza A H1N1 2009, possibly because it was also infrequent among the 2009 pilgrims. url: https://www.ncbi.nlm.nih.gov/pubmed/22197024/ doi: 10.1016/j.tmaid.2011.11.002 id: cord-312691-ynh84b98 author: Mohd, Hamzah A. title: Predictors of MERS-CoV infection: A large case control study of patients presenting with ILI at a MERS-CoV referral hospital in Saudi Arabia date: 2016-09-24 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: BACKGROUND: A case control study to better characterize the clinical features, laboratory, and radiological abnormalities associated with MERS-CoV infection in order to help with early identification of this syndrome from other respiratory infections. METHODS: Eighty patients admitted to a hospital in Riyadh, diagnosed with MERS-CoV infection based on RT-PCR were matched on age, sex, and the presence of a co-morbid condition on a basis of 1:2 to other patients admitted with respiratory symptoms and tested negative for MERS-CoV on RT-PCR. RESULTS: None of the reported MERS-CoV presenting symptoms was significantly associated with being infected with MERS-CoV. On the other hand, WBC count was significantly lower in patients with confirmed MERS-CoV infection (median 5.7 vs 9.3, P: 0.0004). Neutrophil count was as well significantly lower in MERS-CoV patients (median 3.7 vs 6.7, P: 0.0001). Both AST, and ALT values were significantly higher in MERS-CoV infected group (AST median 42 vs 36, P: 0.03, and ALT median 33 vs 28, P: 0.003). Overall our MERS-CoV mortality rate was (10%) below the national figure of (40%). CONCLUSIONS: None of the presenting symptoms are specific for MERS-CoV infection. And out of all the investigations WBC, neutrophil counts, AST and ALT values have some predictive utility. url: https://api.elsevier.com/content/article/pii/S1477893916301260 doi: 10.1016/j.tmaid.2016.09.008 id: cord-320893-bgn04zh3 author: Mubarak, Naeem title: Religious tourism and mass religious gatherings — The potential link in the spread of COVID-19. Current perspective and future implications date: 2020-06-09 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.sciencedirect.com/science/article/pii/S1477893920302763?v=s5 doi: 10.1016/j.tmaid.2020.101786 id: cord-337713-uuo1oeyc author: Ollarves-Carrero, Maria Fernanda title: Anosmia in a healthcare worker with COVID-19 in Madrid, Spain date: 2020-04-13 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://doi.org/10.1016/j.tmaid.2020.101666 doi: 10.1016/j.tmaid.2020.101666 id: cord-273930-4asx0dq3 author: Ortiz-Martínez, Yeimer title: Pericarditis in a young internal medicine resident with COVID-19 in Colombia date: 2020-08-28 words: 756.0 sentences: 46.0 pages: flesch: 53.0 cache: ./cache/cord-273930-4asx0dq3.txt txt: ./txt/cord-273930-4asx0dq3.txt summary: As previously stated [1] COVID-19 may also present in them with a broad and changing spectrum of clinical disease, including cardiovascular conditions, as is the case of the pericarditis. During his hospital course, the patient presented severe chest pain that was difficult to relieve, requiring high doses of morphine, with the subsequent change to oxycodone with clinical improvement. Despite the use of PPE by the HCW, including those on training, as the case described, SARS-CoV-2 infection risk is evident, and transmission may occur. Our case also presented with, a still considered novel, clinical manifestation of COVID-19. Although cardiovascular conditions have been reported widely in COVID-19 so far [3, 4] , there is a lack of cases presenting with pericarditis, especially without other significant complications. In the case of COVID-19, this consequence requires more detailed studies to understand their pathophysiology, but especially their clinical course and implications. abstract: nan url: https://doi.org/10.1016/j.tmaid.2020.101863 doi: 10.1016/j.tmaid.2020.101863 id: cord-323622-229kub7c author: Ou, Xueting title: A severe case with co-infection of SARS-CoV-2 and common respiratory pathogens date: 2020-04-16 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.ncbi.nlm.nih.gov/pubmed/32305630/ doi: 10.1016/j.tmaid.2020.101672 id: cord-029965-bt87kai8 author: Patel, Shailesh Kumar title: The kidney and COVID-19 patients – important considerations date: 2020-08-01 words: 1049.0 sentences: 78.0 pages: flesch: 48.0 cache: ./cache/cord-029965-bt87kai8.txt txt: ./txt/cord-029965-bt87kai8.txt summary: The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) primarily affects the lungs, however, this virus can also affect other organs such as intestine, kidney, heart, and brain [1] [2] [3] . Studies reporting albuminuria and haematuria in the COVID-19 patients along with the detection of viral RNA from the urine samples further support the potential tropism of the SARS-CoV-2 for the renal tissues [4, 12] . Therefore, along with clinical management for pneumonia, potential intervention to protect the kidneys from the virus tropism and cytokine storm must be considered to minimize the mortalities associated with acute renal failure (Figure 1 ). Clinical Characteristics of 138 Hospitalized Patients With 2019 Novel Coronavirus-Infected Pneumonia in Wuhan Coronavirus Disease 19 Infection Does Not Result in Acute Kidney Injury: An Analysis of 116 Hospitalized Patients from Wuhan, China abstract: nan url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7395611/ doi: 10.1016/j.tmaid.2020.101831 id: cord-328056-y5x80tuw author: Popescu, Corneliu P. title: Hydroxychloroquine-azithromycin for COVID-19 – Warranted or dangerous? date: 2020-05-30 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.ncbi.nlm.nih.gov/pubmed/32485391/ doi: 10.1016/j.tmaid.2020.101764 id: cord-268519-t15yvy5s author: Pothen, Lucie title: Safety use of hydroxychloroquine and its combination with azithromycin in the context of Sars-CoV-2 outbreak: Clinical experience in a Belgian tertiary center date: 2020-06-12 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://api.elsevier.com/content/article/pii/S1477893920302787 doi: 10.1016/j.tmaid.2020.101788 id: cord-302735-zal2gr28 author: Priyanka title: Aerosol transmission of SARS-CoV-2: The unresolved paradox date: 2020-09-04 words: 218.0 sentences: 25.0 pages: flesch: 59.0 cache: ./cache/cord-302735-zal2gr28.txt txt: ./txt/cord-302735-zal2gr28.txt summary: key: cord-302735-zal2gr28 title: Aerosol transmission of SARS-CoV-2: The unresolved paradox cord_uid: zal2gr28 The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the aetiological agent 18 of coronavirus disease 2019 , has led to a global pandemic defying the 19 geographical borders and putting the lives of billions at risk. The commonly evident 20 symptoms include fever, altered sense of smell and/or taste, cough, sputum expectoration, 21 sore throat, dyspnoea, fatigue and myalgia; whereas the uncommon symptoms include 22 confusion, dizziness, headache, conjunctivitis, rhinorrhoea, nasal congestion, hemoptysis, 23 chest pain, bronchial breath sounds, tachypnoea, crackles/rales on auscultation, cutaneous The transmission of respiratory pathogens have been associated with three primary modes 30 known as "contact," "droplet," and "airborne" transmission. These modes are also being 31 speculated in the context of SARS-CoV-2, but the existing research-based literature and the 32 consequent guidance from the leading public health agencies are still paradoxical. Viable 117 SARS-CoV-2 in the air of a hospital room 1 with COVID-19 patients. Aerosol transmission of SARS-CoV-2? abstract: nan url: https://api.elsevier.com/content/article/pii/S1477893920303653 doi: 10.1016/j.tmaid.2020.101869 id: cord-281551-0aj2zwx8 author: Schlagenhauf, Patricia title: Repurposing antimalarials and other drugs for COVID-19 date: 2020-04-02 words: 1433.0 sentences: 80.0 pages: flesch: 50.0 cache: ./cache/cord-281551-0aj2zwx8.txt txt: ./txt/cord-281551-0aj2zwx8.txt summary: A French paper reporting on the use of drug combinations in infected patients highlighted the possibility that hydroxychloroquine is effective in the treatment of COVID-19 patients [4] particularly in combination with azithromycin. For instance, teicoplanin was proposed as a potential treatment in COVID-19 patients and has already shown inhibitory effects on cell entry of Ebola virus, SARS-CoV and MERS-CoV in the past. However, it has to be acknowledged that in this and other cases, it is a long, expensive and time-consuming way, even if there is an accelerated avenue to expedite promising developments, from in vitro assays indicative of antiviral effects to the initiation steps of safety and efficacy assessments in humans, Finding compounds that can block the entry of the virus into the cell could be an important approach to find potential therapies for COVID-19. In vitro antiviral activity and projection of optimized dosing design of hydroxychloroquine for the treatment of Severe Acute Respiratory Syndrome coronavirus 2 (SARS-CoV-2) abstract: nan url: https://api.elsevier.com/content/article/pii/S1477893920301265 doi: 10.1016/j.tmaid.2020.101658 id: cord-262454-bccrvapy author: Szente Fonseca, Silvia Nunes title: Risk of Hospitalization for Covid-19 Outpatients Treated with Various Drug Regimens in Brazil: Comparative Analysis date: 2020-10-31 words: 4700.0 sentences: 249.0 pages: flesch: 53.0 cache: ./cache/cord-262454-bccrvapy.txt txt: ./txt/cord-262454-bccrvapy.txt summary: With all that, we developed a protocol for early recognition and treatment of high-risk patients (in our population, age greater than 40 years because of generally poorer health standards, or with comorbidities) who would come to our outpatient network of emergency rooms with influenza-like symptoms: fever, cough, myalgia and headache, among others, and receive early treatment, provided to patients at the first doctor visit, using physician discretion from among HCQ, azithromycin, ivermectin, oseltamivir, zinc sulfate, nitazoxanide and prednisone (the last starting on day-6 of symptoms). On March 28, 2020, the FDA issued an emergency use authorization for remdesivir and HCQ for patients in both clinical trials and with severe hospitalized disease (31) . We found early outpatient use of HCQ and prednisone, both as individual prescriptions and used together, to lower the risk of hospitalization in symptomatic high-risk COVID-19 patients presenting for primary care at the emergency rooms of our large HMO in Brazil. abstract: BACKGROUND: For the past few months, HMOs have faced crowded emergency rooms and insufficient hospital and intensive-care-unit beds, all from the worst pandemic of this century, COVID-19. METHODS: In a large HMO in Brazil, our approach was to allow treating physicians to prescribe antiviral medications immediately at presentation, and prednisone starting on day-6 of symptoms to treat pulmonary inflammation. We implemented this COVID-19 protocol for outpatients and studied 717 consecutive SARS-CoV-2-positive patients age 40 years or older presenting at our emergency rooms. RESULTS: Use of hydroxychloroquine (HCQ), prednisone or both significantly reduced hospitalization risk by 50-60%. Ivermectin, azithromycin and oseltamivir did not substantially reduce risk further. Hospitalization risk was doubled for people with type-2 diabetes or obesity, increased by two-thirds for people with heart disease, and by 75% for each decade of age over age 40. Similar magnitudes of reduced risk with HCQ and prednisone use were seen for mortality risk, though were not significant because of only 11 deaths among the 717 patients. No cardiac arrhythmias requiring medication termination were observed for any of the medications. CONCLUSIONS: This work adds to the growing literature of studies that have found substantial benefit for use of HCQ combined with other agents in the early outpatient treatment of COVID-19, and adds the possibility of steroid use to enhance treatment efficacy. url: https://www.sciencedirect.com/science/article/pii/S1477893920304026?v=s5 doi: 10.1016/j.tmaid.2020.101906 id: cord-006968-1gua1abq author: Tada, Yuki title: Travelers' risk of malaria by destination country: A study from Japan date: 2008-09-23 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: BACKGROUND: Country-specific information on the incidence of malaria in travelers provides the most reliable data on which to base the pre-travel risk assessment. Some such studies have been conducted among Western travelers; however, to our knowledge, there have been no reports on Japanese travelers. METHODS: Malaria cases that were diagnosed between April 1999 and December 2005 and were reported to the national infectious disease surveillance body were used as the numerators after grouped into countries of disease acquisition. The denominators, the numbers of Japanese travelers visiting individual countries were derived from the recipient countries and obtained through a Japanese organization. RESULTS: In addition to the well-documented high risks in sub-Saharan countries, our study showed that travelers to Papua New Guinea were exposed to a significantly high risk of malaria. In Asia, Myanmar had the highest risk. Generally, malaria incidence rates among Japanese travelers were lower than those previously reported on Western travelers. However, the rates were rather comparable to the data obtained recently. CONCLUSIONS: These malaria incidence data in travelers should be taken into consideration for pre-travel risk assessment. They need to be constantly updated, and at the same time, limitations in data interpretation that are inherent in various study methodologies should also be clarified. url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7106141/ doi: 10.1016/j.tmaid.2008.08.002 id: cord-277353-qilq1q7h author: Taniguchi, Kiyosu title: Imported infectious diseases and surveillance in Japan date: 2008-09-11 words: 2054.0 sentences: 104.0 pages: flesch: 42.0 cache: ./cache/cord-277353-qilq1q7h.txt txt: ./txt/cord-277353-qilq1q7h.txt summary: Shigellosis ranked as the most common imported disease, followed by amebiasis, malaria, enterohemorrhagic Escherichia coli infection and the acquired immunodeficiency syndrome, typhoid fever, dengue fever, hepatitis A, giardiasis, cholera, and paratyphoid fever. Current National Epidemiological Surveillance for Infectious Diseases (NESID) in Japan requires that all notifiable diseases should be reported with the presumptive place of infection. Shigellosis ranked as the most common imported infection, followed by amebiasis, malaria, enterohemorrhagic Escherichia coli (EHEC) infection and the acquired immunodeficiency syndromes (AIDS), typhoid fever, dengue fever, hepatitis A, giardiasis, cholera, and paratyphoid fever. Although the outbreak among group tours to endemic countries was reported to account for the increase of imported diseases, 11 investigation of attributable events or causes were not always made in a timely manner. In this study it was not difficult to overview the situation of imported infectious diseases because the current Japanese surveillance system requires the presumptive place of infection including the specified country if possible. abstract: Surveillance of imported infectious diseases is important because of the need for early detection of outbreaks of international concern as well as information of risk to the travelers. This paper attempts to review how the Japanese surveillance system deals with imported infectious diseases and reviews the trend of these diseases. The cases of acquired infection overseas were extracted from the surveillance data in 1999–2008. The incidence and rate of imported cases of a series of infectious diseases with more than one imported case were observed by the year of diagnosis and place of acquired infection. During the period 10,030 cases that could be considered to be imported infectious diseases were identified. Shigellosis ranked as the most common imported disease, followed by amebiasis, malaria, enterohemorrhagic Escherichia coli infection and the acquired immunodeficiency syndrome, typhoid fever, dengue fever, hepatitis A, giardiasis, cholera, and paratyphoid fever. The annual trends of these diseases always fluctuated but not every change was investigated. The study reveals that the situation of imported infectious diseases can be identified in the current Japanese surveillance system with epidemiologic features of both temporal and geographic distribution of cases of imported infectious diseases. However, further timely investigation for unusual increase in infectious diseases is needed. url: https://www.sciencedirect.com/science/article/pii/S1477893908001038 doi: 10.1016/j.tmaid.2008.07.001 id: cord-259106-nrg1960d author: Vasquez-Chavesta, Angie Z. title: COVID-19 and dengue: Pushing the peruvian health care system over the edge date: 2020-06-26 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://doi.org/10.1016/j.tmaid.2020.101808 doi: 10.1016/j.tmaid.2020.101808 id: cord-269759-1n1oo6wc author: Villamil-Gómez, Wilmer E. title: Fatal human coronavirus 229E (HCoV-229E) and RSV–Related pneumonia in an AIDS patient from Colombia date: 2020-02-06 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://api.elsevier.com/content/article/pii/S1477893920300235 doi: 10.1016/j.tmaid.2020.101573 id: cord-268971-4ue58ebz author: Virk, Abinash title: Travel medicine: an American view of the Australian perspective date: 2005-03-03 words: 1200.0 sentences: 71.0 pages: flesch: 45.0 cache: ./cache/cord-268971-4ue58ebz.txt txt: ./txt/cord-268971-4ue58ebz.txt summary: In the United States, most generalists do not have ready access to some pre-travel vaccines (typhoid and Japanese encephalitis since they would not frequently be used in a typical primary care practice, yellow fever due to certification requirements), and most pre-travel care is provided in specialty clinics mostly staffed by infectious disease physicians. 3 North American primary care providers not specifically trained in travel medicine would be more likely to limit their travel medicine advice to travelers going to settings where vaccination beyond hepatitis A is not needed. In addition, the American Committee on Clinical Tropical Medicine and Travelers, Health (http:// www.astmh.org/subgroup/acctmth.asp) provides a forum for education, certification, networking, and communication for practitioners of travel medicine. Notable differences, however, center on the use of both infectious disease specialists and nurses in North American pre-travel consultations rather than primary care physicians and on the non-union of aviation medicine and travel medicine in the United States. abstract: nan url: https://www.ncbi.nlm.nih.gov/pubmed/17292009/ doi: 10.1016/j.tmaid.2004.11.008 id: cord-260256-aczn39lf author: Wehrens, Erik title: Primum non nocere: Potential indirect adverse effects of COVID-19 containment strategies in the African region date: 2020-04-29 words: 418.0 sentences: 30.0 pages: flesch: 55.0 cache: ./cache/cord-260256-aczn39lf.txt txt: ./txt/cord-260256-aczn39lf.txt summary: Dear Editor: With the COVID-19 pandemic spreading in sub-Saharan Africa [1] , governments and health authorities are stepping up containment measures. In Sierra Leone, measurements taken include training of healthcare professionals, establishing testing facilities, information campaigns and a partial lockdown. In many ways, there are parallels with the early phase of the West African Ebola outbreak 2013-2016 -including a steep decrease in in-and outpatients across health facilities [2] . In Sierra Leone, which ranks amongst the countries with the highest maternal and child mortality rates worldwide, the rapid decrease of patients presenting to healthcare facilities in this evolving crisis might herald a massive indirect COVID-19-related death toll. Counting indirect crisis-related deaths in the context of a low-resilience health system: the case of maternal and neonatal health during the Ebola epidemic in Sierra Leone Stability issues of RT-PCR testing of SARS-CoV-2 for hospitalized patients clinically diagnosed with COVID-19 abstract: nan url: https://www.sciencedirect.com/science/article/pii/S1477893920302052?v=s5 doi: 10.1016/j.tmaid.2020.101727 id: cord-287159-bjccnp7u author: Yavarian, Jila title: Influenza virus but not MERS coronavirus circulation in Iran, 2013–2016: Comparison between pilgrims and general population date: 2017-10-12 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: BACKGROUND: The pilgrimage to Mecca and Karbala bring many Muslims to a confined area. Respiratory tract infections are the most common diseases transmitted during mass gatherings in Hajj, Umrah and Karbala. The aim of this study was to determine and compare the prevalence of Middle East respiratory syndrome coronavirus (MERS-CoV) and influenza virus infections among Iranian general population and pilgrims with severe acute respiratory infections (SARI) returning from Mecca and Karbala during 2013–2016. METHODS: During 2013–2016, a total of 42351 throat swabs were examined for presence of influenza viruses and MERS-CoV in Iranian general population and pilgrims returning from Mecca and Karbala with SARI by using one step RT-PCR kit. RESULTS: None of the patients had MERS-CoV but influenza viruses were detected in 12.7% with high circulation of influenza A/H1N1 (47.1%). CONCLUSION: This study showed the prevalence of influenza infections among Iranian pilgrims and general population and suggests continuing surveillance, infection control and appropriate vaccination especially nowadays that the risk of influenza pandemic threatens the world, meanwhile accurate screening for MERS-CoV is also recommended. url: https://www.ncbi.nlm.nih.gov/pubmed/29031546/ doi: 10.1016/j.tmaid.2017.10.007 id: cord-292513-7mhd4wzk author: Yi-Fong Su, Vincent title: Masks and medical care: Two keys to Taiwan's success in preventing COVID-19 spread date: 2020-06-04 words: nan sentences: nan pages: flesch: nan cache: txt: summary: abstract: nan url: https://www.sciencedirect.com/science/article/pii/S1477893920302702?v=s5 doi: 10.1016/j.tmaid.2020.101780 id: cord-341187-jqesw4e8 author: Yu, Xinhua title: Modeling Return of the Epidemic: Impact of Population Structure, Asymptomatic Infection, Case Importation and Personal Contacts date: 2020-08-27 words: 3797.0 sentences: 217.0 pages: flesch: 47.0 cache: ./cache/cord-341187-jqesw4e8.txt txt: ./txt/cord-341187-jqesw4e8.txt summary: title: Modeling Return of the Epidemic: Impact of Population Structure, Asymptomatic Infection, Case Importation and Personal Contacts J o u r n a l P r e -p r o o f 7 We investigate the impact of population structure, case importation, asymptomatic cases, and the number of contacts on a possible second wave of epidemic through mathematical modelling. Methods: we built a modified Susceptible-exposed-Infectious-Removed (SEIR) model with parameters mirroring those of the COVID-19 pandemic and reported simulated characteristics of epidemics for incidence, hospitalizations and deaths under different scenarios. Methods: we built a modified Susceptible-exposed-Infectious-Removed (SEIR) model with parameters mirroring those of the COVID-19 pandemic and reported simulated characteristics of epidemics for incidence, hospitalizations and deaths under different scenarios. Epidemic model simulation has been used extensively to estimate essential epidemic parameters, In this study, we will build a modified Susceptible-Exposed-Infectious-Removed (SEIR) model [27] to simulate the COVID-19 pandemic and investigate the impact of population structure, asymptomatic cases, case importation, and the number of contacts on the epidemic progression. abstract: BACKGROUND: Proactive interventions have halted the pandemic of coronavirus infected disease in some regions. However, without reaching herd immunity, the return of epidemic is possible. We investigate the impact of population structure, case importation, asymptomatic cases, and the number of contacts on a possible second wave of epidemic through mathematical modelling. METHODS: we built a modified Susceptible-exposed-Infectious-Removed (SEIR) model with parameters mirroring those of the COVID-19 pandemic and reported simulated characteristics of epidemics for incidence, hospitalizations and deaths under different scenarios. RESULTS: A larger percent of elderly people leads to higher number of hospitalizations, while a large percent of prior infection will effectively curb the epidemic. The number of imported cases and the speed of importation have small impact on the epidemic progression. However, a higher percent of asymptomatic cases slows the epidemic down and reduces the number of hospitalizations and deaths at the epidemic peak. Finally, reducing the number of contacts among young people alone has moderate effects on themselves, but little effects on the elderly population. However, reducing the number of contacts among elderly people alone can mitigate the epidemic significantly in both age groups, even though young people remain active within themselves. CONCLUSION: Reducing the number of contacts among high risk populations alone can mitigate the burden of epidemic in the whole society. Interventions targeting high risk groups may be more effective in containing or mitigating the epidemic. url: https://doi.org/10.1016/j.tmaid.2020.101858 doi: 10.1016/j.tmaid.2020.101858 ==== make-pages.sh questions [ERIC WAS HERE] ==== make-pages.sh search /data-disk/reader-compute/reader-cord/bin/make-pages.sh: line 77: /data-disk/reader-compute/reader-cord/tmp/search.htm: No such file or directory Traceback (most recent call last): File "/data-disk/reader-compute/reader-cord/bin/tsv2htm-search.py", line 51, in with open( TEMPLATE, 'r' ) as handle : htm = handle.read() FileNotFoundError: [Errno 2] No such file or directory: '/data-disk/reader-compute/reader-cord/tmp/search.htm' ==== make-pages.sh topic modeling corpus Zipping study carrel