id sid tid token lemma pos cord-048471-7jszm1nd 1 1 key key JJ cord-048471-7jszm1nd 1 2 : : : cord-048471-7jszm1nd 1 3 cord-048471 cord-048471 NN cord-048471-7jszm1nd 1 4 - - HYPH cord-048471-7jszm1nd 1 5 7jszm1nd 7jszm1nd CD cord-048471-7jszm1nd 1 6 authors author NNS cord-048471-7jszm1nd 1 7 : : : cord-048471-7jszm1nd 1 8 Salim Salim NNP cord-048471-7jszm1nd 1 9 , , , cord-048471-7jszm1nd 1 10 Omar Omar NNP cord-048471-7jszm1nd 1 11 ; ; : cord-048471-7jszm1nd 1 12 Clarke Clarke NNP cord-048471-7jszm1nd 1 13 , , , cord-048471-7jszm1nd 1 14 Ian Ian NNP cord-048471-7jszm1nd 1 15 N. N. NNP cord-048471-7jszm1nd 1 16 ; ; : cord-048471-7jszm1nd 1 17 Lambden Lambden NNP cord-048471-7jszm1nd 1 18 , , , cord-048471-7jszm1nd 1 19 Paul Paul NNP cord-048471-7jszm1nd 1 20 R. R. NNP cord-048471-7jszm1nd 1 21 title title NN cord-048471-7jszm1nd 1 22 : : : cord-048471-7jszm1nd 1 23 Functional Functional NNP cord-048471-7jszm1nd 1 24 Analysis Analysis NNP cord-048471-7jszm1nd 1 25 of of IN cord-048471-7jszm1nd 1 26 the the DT cord-048471-7jszm1nd 1 27 5′ 5′ CD cord-048471-7jszm1nd 1 28 Genomic Genomic NNP cord-048471-7jszm1nd 1 29 Sequence sequence NN cord-048471-7jszm1nd 1 30 of of IN cord-048471-7jszm1nd 1 31 a a DT cord-048471-7jszm1nd 1 32 Bovine Bovine NNP cord-048471-7jszm1nd 1 33 Norovirus Norovirus NNP cord-048471-7jszm1nd 1 34 date date NN cord-048471-7jszm1nd 1 35 : : : cord-048471-7jszm1nd 1 36 2008 2008 CD cord-048471-7jszm1nd 1 37 - - SYM cord-048471-7jszm1nd 1 38 05 05 CD cord-048471-7jszm1nd 1 39 - - SYM cord-048471-7jszm1nd 1 40 14 14 CD cord-048471-7jszm1nd 1 41 journal journal NN cord-048471-7jszm1nd 1 42 : : : cord-048471-7jszm1nd 2 1 PLoS PLoS NNP cord-048471-7jszm1nd 3 1 One one CD cord-048471-7jszm1nd 3 2 DOI doi NN cord-048471-7jszm1nd 3 3 : : : cord-048471-7jszm1nd 3 4 10.1371 10.1371 CD cord-048471-7jszm1nd 3 5 / / SYM cord-048471-7jszm1nd 3 6 journal.pone.0002169 journal.pone.0002169 NN cord-048471-7jszm1nd 3 7 sha sha NNP cord-048471-7jszm1nd 3 8 : : : cord-048471-7jszm1nd 3 9 702d0144bdeae0782bbebcbe41d432fa7ae41415 702d0144bdeae0782bbebcbe41d432fa7ae41415 CD cord-048471-7jszm1nd 3 10 doc_id doc_id CD cord-048471-7jszm1nd 3 11 : : : cord-048471-7jszm1nd 3 12 48471 48471 CD cord-048471-7jszm1nd 3 13 cord_uid cord_uid NNS cord-048471-7jszm1nd 3 14 : : : cord-048471-7jszm1nd 4 1 7jszm1nd 7jszm1nd CD cord-048471-7jszm1nd 5 1 BACKGROUND background NN cord-048471-7jszm1nd 5 2 : : : cord-048471-7jszm1nd 6 1 Jena Jena NNP cord-048471-7jszm1nd 6 2 Virus Virus NNP cord-048471-7jszm1nd 6 3 ( ( -LRB- cord-048471-7jszm1nd 6 4 JV JV NNP cord-048471-7jszm1nd 6 5 ) ) -RRB- cord-048471-7jszm1nd 6 6 , , , cord-048471-7jszm1nd 6 7 a a DT cord-048471-7jszm1nd 6 8 bovine bovine JJ cord-048471-7jszm1nd 6 9 Norovirus norovirus NN cord-048471-7jszm1nd 6 10 , , , cord-048471-7jszm1nd 6 11 causes cause VBZ cord-048471-7jszm1nd 6 12 enteric enteric JJ cord-048471-7jszm1nd 6 13 disease disease NN cord-048471-7jszm1nd 6 14 in in IN cord-048471-7jszm1nd 6 15 cattle cattle NNS cord-048471-7jszm1nd 6 16 and and CC cord-048471-7jszm1nd 6 17 represents represent VBZ cord-048471-7jszm1nd 6 18 a a DT cord-048471-7jszm1nd 6 19 potential potential JJ cord-048471-7jszm1nd 6 20 model model NN cord-048471-7jszm1nd 6 21 for for IN cord-048471-7jszm1nd 6 22 the the DT cord-048471-7jszm1nd 6 23 study study NN cord-048471-7jszm1nd 6 24 of of IN cord-048471-7jszm1nd 6 25 enteric enteric JJ cord-048471-7jszm1nd 6 26 norovirus norovirus NN cord-048471-7jszm1nd 6 27 infection infection NN cord-048471-7jszm1nd 6 28 and and CC cord-048471-7jszm1nd 6 29 pathogenesis pathogenesis NN cord-048471-7jszm1nd 6 30 . . . cord-048471-7jszm1nd 7 1 The the DT cord-048471-7jszm1nd 7 2 positive positive JJ cord-048471-7jszm1nd 7 3 sense sense NN cord-048471-7jszm1nd 7 4 RNA RNA NNP cord-048471-7jszm1nd 7 5 genome genome NN cord-048471-7jszm1nd 7 6 of of IN cord-048471-7jszm1nd 7 7 JV JV NNP cord-048471-7jszm1nd 7 8 is be VBZ cord-048471-7jszm1nd 7 9 organised organise VBN cord-048471-7jszm1nd 7 10 into into IN cord-048471-7jszm1nd 7 11 ORF1 ORF1 NNP cord-048471-7jszm1nd 7 12 ( ( -LRB- cord-048471-7jszm1nd 7 13 non non JJ cord-048471-7jszm1nd 7 14 - - JJ cord-048471-7jszm1nd 7 15 structural structural JJ cord-048471-7jszm1nd 7 16 proteins protein NNS cord-048471-7jszm1nd 7 17 ) ) -RRB- cord-048471-7jszm1nd 7 18 , , , cord-048471-7jszm1nd 7 19 ORF2 ORF2 NNP cord-048471-7jszm1nd 7 20 ( ( -LRB- cord-048471-7jszm1nd 7 21 major major JJ cord-048471-7jszm1nd 7 22 capsid capsid NN cord-048471-7jszm1nd 7 23 protein protein NN cord-048471-7jszm1nd 7 24 ) ) -RRB- cord-048471-7jszm1nd 7 25 and and CC cord-048471-7jszm1nd 7 26 ORF3 ORF3 NNP cord-048471-7jszm1nd 7 27 ( ( -LRB- cord-048471-7jszm1nd 7 28 minor minor JJ cord-048471-7jszm1nd 7 29 capsid capsid NN cord-048471-7jszm1nd 7 30 protein protein NN cord-048471-7jszm1nd 7 31 ) ) -RRB- cord-048471-7jszm1nd 7 32 . . . cord-048471-7jszm1nd 8 1 The the DT cord-048471-7jszm1nd 8 2 lack lack NN cord-048471-7jszm1nd 8 3 of of IN cord-048471-7jszm1nd 8 4 a a DT cord-048471-7jszm1nd 8 5 cell cell NN cord-048471-7jszm1nd 8 6 culture culture NN cord-048471-7jszm1nd 8 7 system system NN cord-048471-7jszm1nd 8 8 for for IN cord-048471-7jszm1nd 8 9 studying study VBG cord-048471-7jszm1nd 8 10 JV JV NNP cord-048471-7jszm1nd 8 11 replication replication NN cord-048471-7jszm1nd 8 12 has have VBZ cord-048471-7jszm1nd 8 13 meant mean VBN cord-048471-7jszm1nd 8 14 that that IN cord-048471-7jszm1nd 8 15 work work NN cord-048471-7jszm1nd 8 16 to to IN cord-048471-7jszm1nd 8 17 date date NN cord-048471-7jszm1nd 8 18 has have VBZ cord-048471-7jszm1nd 8 19 relied rely VBN cord-048471-7jszm1nd 8 20 upon upon IN cord-048471-7jszm1nd 8 21 in in FW cord-048471-7jszm1nd 8 22 vitro vitro FW cord-048471-7jszm1nd 8 23 systems system NNS cord-048471-7jszm1nd 8 24 to to TO cord-048471-7jszm1nd 8 25 study study VB cord-048471-7jszm1nd 8 26 non non JJ cord-048471-7jszm1nd 8 27 - - JJ cord-048471-7jszm1nd 8 28 structural structural JJ cord-048471-7jszm1nd 8 29 protein protein NN cord-048471-7jszm1nd 8 30 synthesis synthesis NN cord-048471-7jszm1nd 8 31 and and CC cord-048471-7jszm1nd 8 32 processing processing NN cord-048471-7jszm1nd 8 33 . . . cord-048471-7jszm1nd 9 1 PRINCIPAL principal NN cord-048471-7jszm1nd 9 2 FINDINGS finding NNS cord-048471-7jszm1nd 9 3 : : : cord-048471-7jszm1nd 10 1 Only only RB cord-048471-7jszm1nd 10 2 two two CD cord-048471-7jszm1nd 10 3 of of IN cord-048471-7jszm1nd 10 4 the the DT cord-048471-7jszm1nd 10 5 three three CD cord-048471-7jszm1nd 10 6 major major JJ cord-048471-7jszm1nd 10 7 ORF1 ORF1 NNP cord-048471-7jszm1nd 10 8 proteins protein NNS cord-048471-7jszm1nd 10 9 were be VBD cord-048471-7jszm1nd 10 10 identified identify VBN cord-048471-7jszm1nd 10 11 ( ( -LRB- cord-048471-7jszm1nd 10 12 p110 p110 NNP cord-048471-7jszm1nd 10 13 and and CC cord-048471-7jszm1nd 10 14 2C 2C NNP cord-048471-7jszm1nd 10 15 ) ) -RRB- cord-048471-7jszm1nd 10 16 following follow VBG cord-048471-7jszm1nd 10 17 in in IN cord-048471-7jszm1nd 10 18 vitro vitro FW cord-048471-7jszm1nd 10 19 translation translation NN cord-048471-7jszm1nd 10 20 of of IN cord-048471-7jszm1nd 10 21 JV JV NNP cord-048471-7jszm1nd 10 22 RNA RNA NNP cord-048471-7jszm1nd 10 23 , , , cord-048471-7jszm1nd 10 24 the the DT cord-048471-7jszm1nd 10 25 N n CD cord-048471-7jszm1nd 10 26 - - HYPH cord-048471-7jszm1nd 10 27 term term NN cord-048471-7jszm1nd 10 28 protein protein NN cord-048471-7jszm1nd 10 29 was be VBD cord-048471-7jszm1nd 10 30 not not RB cord-048471-7jszm1nd 10 31 detected detect VBN cord-048471-7jszm1nd 10 32 . . . cord-048471-7jszm1nd 11 1 The the DT cord-048471-7jszm1nd 11 2 N n CD cord-048471-7jszm1nd 11 3 - - HYPH cord-048471-7jszm1nd 11 4 term term NN cord-048471-7jszm1nd 11 5 encoding encode VBG cord-048471-7jszm1nd 11 6 genomic genomic JJ cord-048471-7jszm1nd 11 7 sequence sequence NN cord-048471-7jszm1nd 11 8 ( ( -LRB- cord-048471-7jszm1nd 11 9 5′GS 5′gs CD cord-048471-7jszm1nd 11 10 ) ) -RRB- cord-048471-7jszm1nd 11 11 was be VBD cord-048471-7jszm1nd 11 12 tested test VBN cord-048471-7jszm1nd 11 13 for for IN cord-048471-7jszm1nd 11 14 IRES IRES NNP cord-048471-7jszm1nd 11 15 - - HYPH cord-048471-7jszm1nd 11 16 like like JJ cord-048471-7jszm1nd 11 17 function function NN cord-048471-7jszm1nd 11 18 in in IN cord-048471-7jszm1nd 11 19 a a DT cord-048471-7jszm1nd 11 20 bi bi JJ cord-048471-7jszm1nd 11 21 - - JJ cord-048471-7jszm1nd 11 22 cistronic cistronic JJ cord-048471-7jszm1nd 11 23 system system NN cord-048471-7jszm1nd 11 24 and and CC cord-048471-7jszm1nd 11 25 displayed display VBD cord-048471-7jszm1nd 11 26 no no DT cord-048471-7jszm1nd 11 27 evidence evidence NN cord-048471-7jszm1nd 11 28 of of IN cord-048471-7jszm1nd 11 29 IRES IRES NNP cord-048471-7jszm1nd 11 30 - - HYPH cord-048471-7jszm1nd 11 31 like like JJ cord-048471-7jszm1nd 11 32 activity activity NN cord-048471-7jszm1nd 11 33 . . . cord-048471-7jszm1nd 12 1 The the DT cord-048471-7jszm1nd 12 2 site site NN cord-048471-7jszm1nd 12 3 of of IN cord-048471-7jszm1nd 12 4 translation translation NN cord-048471-7jszm1nd 12 5 initiation initiation NN cord-048471-7jszm1nd 12 6 in in IN cord-048471-7jszm1nd 12 7 JV JV NNP cord-048471-7jszm1nd 12 8 was be VBD cord-048471-7jszm1nd 12 9 determined determine VBN cord-048471-7jszm1nd 12 10 to to TO cord-048471-7jszm1nd 12 11 be be VB cord-048471-7jszm1nd 12 12 at at IN cord-048471-7jszm1nd 12 13 the the DT cord-048471-7jszm1nd 12 14 predicted predict VBN cord-048471-7jszm1nd 12 15 nucleotide nucleotide JJ cord-048471-7jszm1nd 12 16 22 22 CD cord-048471-7jszm1nd 12 17 . . . cord-048471-7jszm1nd 13 1 Following follow VBG cord-048471-7jszm1nd 13 2 the the DT cord-048471-7jszm1nd 13 3 insertion insertion NN cord-048471-7jszm1nd 13 4 of of IN cord-048471-7jszm1nd 13 5 an an DT cord-048471-7jszm1nd 13 6 epitope epitope NN cord-048471-7jszm1nd 13 7 within within IN cord-048471-7jszm1nd 13 8 the the DT cord-048471-7jszm1nd 13 9 5′GS 5′gs CD cord-048471-7jszm1nd 14 1 the the DT cord-048471-7jszm1nd 14 2 JV JV NNP cord-048471-7jszm1nd 14 3 N N NNP cord-048471-7jszm1nd 14 4 - - HYPH cord-048471-7jszm1nd 14 5 term term NN cord-048471-7jszm1nd 14 6 protein protein NN cord-048471-7jszm1nd 14 7 was be VBD cord-048471-7jszm1nd 14 8 identified identify VBN cord-048471-7jszm1nd 14 9 in in IN cord-048471-7jszm1nd 14 10 vitro vitro FW cord-048471-7jszm1nd 14 11 and and CC cord-048471-7jszm1nd 14 12 within within IN cord-048471-7jszm1nd 14 13 RNA RNA NNP cord-048471-7jszm1nd 14 14 transfected transfecte VBN cord-048471-7jszm1nd 14 15 cells cell NNS cord-048471-7jszm1nd 14 16 . . . cord-048471-7jszm1nd 15 1 CONCLUSIONS conclusion NNS cord-048471-7jszm1nd 15 2 : : : cord-048471-7jszm1nd 16 1 The the DT cord-048471-7jszm1nd 16 2 in in IN cord-048471-7jszm1nd 16 3 vitro vitro FW cord-048471-7jszm1nd 16 4 transcription transcription NN cord-048471-7jszm1nd 16 5 / / SYM cord-048471-7jszm1nd 16 6 translation translation NN cord-048471-7jszm1nd 16 7 system system NN cord-048471-7jszm1nd 16 8 is be VBZ cord-048471-7jszm1nd 16 9 currently currently RB cord-048471-7jszm1nd 16 10 the the DT cord-048471-7jszm1nd 16 11 best good JJS cord-048471-7jszm1nd 16 12 system system NN cord-048471-7jszm1nd 16 13 for for IN cord-048471-7jszm1nd 16 14 analysing analyse VBG cord-048471-7jszm1nd 16 15 protein protein NN cord-048471-7jszm1nd 16 16 synthesis synthesis NN cord-048471-7jszm1nd 16 17 and and CC cord-048471-7jszm1nd 16 18 processing processing NN cord-048471-7jszm1nd 16 19 in in IN cord-048471-7jszm1nd 16 20 JV JV NNP cord-048471-7jszm1nd 16 21 . . . cord-048471-7jszm1nd 17 1 Unlike unlike IN cord-048471-7jszm1nd 17 2 similarly similarly RB cord-048471-7jszm1nd 17 3 studied study VBN cord-048471-7jszm1nd 17 4 human human JJ cord-048471-7jszm1nd 17 5 noroviruses noroviruse NNS cord-048471-7jszm1nd 17 6 JV JV NNP cord-048471-7jszm1nd 17 7 initially initially RB cord-048471-7jszm1nd 17 8 did do VBD cord-048471-7jszm1nd 17 9 not not RB cord-048471-7jszm1nd 17 10 appear appear VB cord-048471-7jszm1nd 17 11 to to TO cord-048471-7jszm1nd 17 12 express express VB cord-048471-7jszm1nd 17 13 the the DT cord-048471-7jszm1nd 17 14 N n CD cord-048471-7jszm1nd 17 15 - - HYPH cord-048471-7jszm1nd 17 16 terminal terminal NN cord-048471-7jszm1nd 17 17 protein protein NN cord-048471-7jszm1nd 17 18 , , , cord-048471-7jszm1nd 17 19 presenting present VBG cord-048471-7jszm1nd 17 20 the the DT cord-048471-7jszm1nd 17 21 possibility possibility NN cord-048471-7jszm1nd 17 22 that that IN cord-048471-7jszm1nd 17 23 the the DT cord-048471-7jszm1nd 17 24 encoding encoding NN cord-048471-7jszm1nd 17 25 RNA RNA NNP cord-048471-7jszm1nd 17 26 sequence sequence NN cord-048471-7jszm1nd 17 27 had have VBD cord-048471-7jszm1nd 17 28 a a DT cord-048471-7jszm1nd 17 29 regulatory regulatory JJ cord-048471-7jszm1nd 17 30 function function NN cord-048471-7jszm1nd 17 31 , , , cord-048471-7jszm1nd 17 32 most most RBS cord-048471-7jszm1nd 17 33 likely likely RB cord-048471-7jszm1nd 17 34 involved involve VBN cord-048471-7jszm1nd 17 35 in in IN cord-048471-7jszm1nd 17 36 translation translation NN cord-048471-7jszm1nd 17 37 initiation initiation NN cord-048471-7jszm1nd 17 38 in in IN cord-048471-7jszm1nd 17 39 an an DT cord-048471-7jszm1nd 17 40 IRES IRES NNP cord-048471-7jszm1nd 17 41 - - HYPH cord-048471-7jszm1nd 17 42 like like JJ cord-048471-7jszm1nd 17 43 manner manner NN cord-048471-7jszm1nd 17 44 . . . cord-048471-7jszm1nd 18 1 This this DT cord-048471-7jszm1nd 18 2 was be VBD cord-048471-7jszm1nd 18 3 not not RB cord-048471-7jszm1nd 18 4 the the DT cord-048471-7jszm1nd 18 5 case case NN cord-048471-7jszm1nd 18 6 and and CC cord-048471-7jszm1nd 18 7 , , , cord-048471-7jszm1nd 18 8 following follow VBG cord-048471-7jszm1nd 18 9 determination determination NN cord-048471-7jszm1nd 18 10 of of IN cord-048471-7jszm1nd 18 11 the the DT cord-048471-7jszm1nd 18 12 site site NN cord-048471-7jszm1nd 18 13 of of IN cord-048471-7jszm1nd 18 14 translation translation NN cord-048471-7jszm1nd 18 15 initiation initiation NN cord-048471-7jszm1nd 19 1 the the DT cord-048471-7jszm1nd 19 2 N n CD cord-048471-7jszm1nd 19 3 - - HYPH cord-048471-7jszm1nd 19 4 term term NN cord-048471-7jszm1nd 19 5 protein protein NN cord-048471-7jszm1nd 19 6 was be VBD cord-048471-7jszm1nd 19 7 detected detect VBN cord-048471-7jszm1nd 19 8 using use VBG cord-048471-7jszm1nd 19 9 an an DT cord-048471-7jszm1nd 19 10 epitope epitope NN cord-048471-7jszm1nd 19 11 tag tag NN cord-048471-7jszm1nd 19 12 , , , cord-048471-7jszm1nd 19 13 both both CC cord-048471-7jszm1nd 19 14 in in IN cord-048471-7jszm1nd 19 15 vitro vitro FW cord-048471-7jszm1nd 19 16 and and CC cord-048471-7jszm1nd 19 17 in in IN cord-048471-7jszm1nd 19 18 vivo vivo NNP cord-048471-7jszm1nd 19 19 . . . cord-048471-7jszm1nd 20 1 Although although IN cord-048471-7jszm1nd 20 2 slightly slightly RB cord-048471-7jszm1nd 20 3 larger large JJR cord-048471-7jszm1nd 20 4 than than IN cord-048471-7jszm1nd 20 5 predicted predict VBD cord-048471-7jszm1nd 20 6 the the DT cord-048471-7jszm1nd 20 7 N n CD cord-048471-7jszm1nd 20 8 - - HYPH cord-048471-7jszm1nd 20 9 term term NN cord-048471-7jszm1nd 20 10 protein protein NN cord-048471-7jszm1nd 20 11 was be VBD cord-048471-7jszm1nd 20 12 detected detect VBN cord-048471-7jszm1nd 20 13 in in IN cord-048471-7jszm1nd 20 14 a a DT cord-048471-7jszm1nd 20 15 processed process VBN cord-048471-7jszm1nd 20 16 form form NN cord-048471-7jszm1nd 20 17 in in IN cord-048471-7jszm1nd 20 18 vivo vivo NN cord-048471-7jszm1nd 20 19 , , , cord-048471-7jszm1nd 20 20 thus thus RB cord-048471-7jszm1nd 20 21 not not RB cord-048471-7jszm1nd 20 22 only only RB cord-048471-7jszm1nd 20 23 demonstrating demonstrate VBG cord-048471-7jszm1nd 20 24 initial initial JJ cord-048471-7jszm1nd 20 25 translation translation NN cord-048471-7jszm1nd 20 26 of of IN cord-048471-7jszm1nd 20 27 the the DT cord-048471-7jszm1nd 20 28 ORF1 ORF1 NNP cord-048471-7jszm1nd 20 29 polyprotein polyprotein NN cord-048471-7jszm1nd 20 30 but but CC cord-048471-7jszm1nd 20 31 also also RB cord-048471-7jszm1nd 20 32 activity activity NN cord-048471-7jszm1nd 20 33 of of IN cord-048471-7jszm1nd 20 34 the the DT cord-048471-7jszm1nd 20 35 viral viral JJ cord-048471-7jszm1nd 20 36 protease protease NN cord-048471-7jszm1nd 20 37 . . . cord-048471-7jszm1nd 21 1 These these DT cord-048471-7jszm1nd 21 2 findings finding NNS cord-048471-7jszm1nd 21 3 indicate indicate VBP cord-048471-7jszm1nd 21 4 that that IN cord-048471-7jszm1nd 21 5 the the DT cord-048471-7jszm1nd 21 6 block block NN cord-048471-7jszm1nd 21 7 to to IN cord-048471-7jszm1nd 21 8 noroviral noroviral NNP cord-048471-7jszm1nd 21 9 replication replication NN cord-048471-7jszm1nd 21 10 in in IN cord-048471-7jszm1nd 21 11 cultured cultured JJ cord-048471-7jszm1nd 21 12 cells cell NNS cord-048471-7jszm1nd 21 13 lies lie VBZ cord-048471-7jszm1nd 21 14 elsewhere elsewhere RB cord-048471-7jszm1nd 21 15 . . . cord-048471-7jszm1nd 22 1 Jena Jena NNP cord-048471-7jszm1nd 22 2 virus virus NN cord-048471-7jszm1nd 22 3 , , , cord-048471-7jszm1nd 22 4 a a DT cord-048471-7jszm1nd 22 5 bovine bovine JJ cord-048471-7jszm1nd 22 6 norovirus norovirus NN cord-048471-7jszm1nd 22 7 , , , cord-048471-7jszm1nd 22 8 is be VBZ cord-048471-7jszm1nd 22 9 a a DT cord-048471-7jszm1nd 22 10 member member NN cord-048471-7jszm1nd 22 11 of of IN cord-048471-7jszm1nd 22 12 the the DT cord-048471-7jszm1nd 22 13 Caliciviridae Caliciviridae NNP cord-048471-7jszm1nd 22 14 family family NN cord-048471-7jszm1nd 22 15 of of IN cord-048471-7jszm1nd 22 16 positive positive JJ cord-048471-7jszm1nd 22 17 sense sense NN cord-048471-7jszm1nd 22 18 RNA RNA NNP cord-048471-7jszm1nd 22 19 viruses virus NNS cord-048471-7jszm1nd 22 20 and and CC cord-048471-7jszm1nd 22 21 was be VBD cord-048471-7jszm1nd 22 22 first first RB cord-048471-7jszm1nd 22 23 isolated isolate VBN cord-048471-7jszm1nd 22 24 from from IN cord-048471-7jszm1nd 22 25 the the DT cord-048471-7jszm1nd 22 26 diarrhoeic diarrhoeic JJ cord-048471-7jszm1nd 22 27 stools stool NNS cord-048471-7jszm1nd 22 28 of of IN cord-048471-7jszm1nd 22 29 newborn newborn JJ cord-048471-7jszm1nd 22 30 calves calf NNS cord-048471-7jszm1nd 22 31 [ [ -LRB- cord-048471-7jszm1nd 22 32 1 1 CD cord-048471-7jszm1nd 22 33 , , , cord-048471-7jszm1nd 22 34 2 2 CD cord-048471-7jszm1nd 22 35 ] ] -RRB- cord-048471-7jszm1nd 22 36 . . . cord-048471-7jszm1nd 23 1 JV JV NNP cord-048471-7jszm1nd 23 2 is be VBZ cord-048471-7jszm1nd 23 3 a a DT cord-048471-7jszm1nd 23 4 type type NN cord-048471-7jszm1nd 23 5 I -PRON- PRP cord-048471-7jszm1nd 23 6 genogroup genogroup NN cord-048471-7jszm1nd 23 7 III III NNP cord-048471-7jszm1nd 24 1 ( ( -LRB- cord-048471-7jszm1nd 24 2 GIII GIII NNP cord-048471-7jszm1nd 24 3 ) ) -RRB- cord-048471-7jszm1nd 24 4 norovirus norovirus NN cord-048471-7jszm1nd 24 5 which which WDT cord-048471-7jszm1nd 24 6 is be VBZ cord-048471-7jszm1nd 24 7 closely closely RB cord-048471-7jszm1nd 24 8 related related JJ cord-048471-7jszm1nd 24 9 to to IN cord-048471-7jszm1nd 24 10 the the DT cord-048471-7jszm1nd 24 11 type type NN cord-048471-7jszm1nd 24 12 II II NNP cord-048471-7jszm1nd 24 13 GIII GIII NNP cord-048471-7jszm1nd 24 14 bovine bovine JJ cord-048471-7jszm1nd 24 15 noroviruses noroviruse NNS cord-048471-7jszm1nd 24 16 Newbury Newbury NNP cord-048471-7jszm1nd 24 17 agent agent NN cord-048471-7jszm1nd 24 18 2 2 CD cord-048471-7jszm1nd 24 19 and and CC cord-048471-7jszm1nd 24 20 Dumfries Dumfries NNP cord-048471-7jszm1nd 24 21 [ [ -LRB- cord-048471-7jszm1nd 24 22 3 3 CD cord-048471-7jszm1nd 24 23 , , , cord-048471-7jszm1nd 24 24 4 4 CD cord-048471-7jszm1nd 24 25 ] ] -RRB- cord-048471-7jszm1nd 24 26 . . . cord-048471-7jszm1nd 25 1 The the DT cord-048471-7jszm1nd 25 2 GIII GIII NNP cord-048471-7jszm1nd 25 3 noroviruses noroviruse NNS cord-048471-7jszm1nd 25 4 are be VBP cord-048471-7jszm1nd 25 5 responsible responsible JJ cord-048471-7jszm1nd 25 6 for for IN cord-048471-7jszm1nd 25 7 causing cause VBG cord-048471-7jszm1nd 25 8 enteric enteric JJ cord-048471-7jszm1nd 25 9 disease disease NN cord-048471-7jszm1nd 25 10 in in IN cord-048471-7jszm1nd 25 11 cattle cattle NNS cord-048471-7jszm1nd 25 12 [ [ -LRB- cord-048471-7jszm1nd 25 13 2 2 CD cord-048471-7jszm1nd 25 14 , , , cord-048471-7jszm1nd 25 15 5 5 CD cord-048471-7jszm1nd 25 16 ] ] -RRB- cord-048471-7jszm1nd 25 17 and and CC cord-048471-7jszm1nd 25 18 , , , cord-048471-7jszm1nd 25 19 thus thus RB cord-048471-7jszm1nd 25 20 , , , cord-048471-7jszm1nd 25 21 likely likely RB cord-048471-7jszm1nd 25 22 share share VBP cord-048471-7jszm1nd 25 23 a a DT cord-048471-7jszm1nd 25 24 similar similar JJ cord-048471-7jszm1nd 25 25 tissue tissue NN cord-048471-7jszm1nd 25 26 tropism tropism NN cord-048471-7jszm1nd 25 27 to to IN cord-048471-7jszm1nd 25 28 the the DT cord-048471-7jszm1nd 25 29 human human NN cord-048471-7jszm1nd 25 30 - - HYPH cord-048471-7jszm1nd 25 31 associated associate VBN cord-048471-7jszm1nd 25 32 enteric enteric JJ cord-048471-7jszm1nd 25 33 noroviruses noroviruse NNS cord-048471-7jszm1nd 25 34 . . . cord-048471-7jszm1nd 26 1 Like like IN cord-048471-7jszm1nd 26 2 human human JJ cord-048471-7jszm1nd 26 3 noroviruses noroviruse NNS cord-048471-7jszm1nd 26 4 [ [ -LRB- cord-048471-7jszm1nd 26 5 6 6 CD cord-048471-7jszm1nd 26 6 ] ] -RRB- cord-048471-7jszm1nd 26 7 bovine bovine JJ cord-048471-7jszm1nd 26 8 noroviruses noroviruse NNS cord-048471-7jszm1nd 26 9 have have VBP cord-048471-7jszm1nd 26 10 a a DT cord-048471-7jszm1nd 26 11 high high JJ cord-048471-7jszm1nd 26 12 seroprevalence seroprevalence NN cord-048471-7jszm1nd 26 13 [ [ -LRB- cord-048471-7jszm1nd 26 14 4 4 CD cord-048471-7jszm1nd 26 15 ] ] -RRB- cord-048471-7jszm1nd 26 16 . . . cord-048471-7jszm1nd 27 1 JV JV NNP cord-048471-7jszm1nd 27 2 is be VBZ cord-048471-7jszm1nd 27 3 therefore therefore RB cord-048471-7jszm1nd 27 4 a a DT cord-048471-7jszm1nd 27 5 potentially potentially RB cord-048471-7jszm1nd 27 6 useful useful JJ cord-048471-7jszm1nd 27 7 model model NN cord-048471-7jszm1nd 27 8 for for IN cord-048471-7jszm1nd 27 9 studying study VBG cord-048471-7jszm1nd 27 10 the the DT cord-048471-7jszm1nd 27 11 molecular molecular JJ cord-048471-7jszm1nd 27 12 biology biology NN cord-048471-7jszm1nd 27 13 of of IN cord-048471-7jszm1nd 27 14 enteric enteric JJ cord-048471-7jszm1nd 27 15 norovirus norovirus NN cord-048471-7jszm1nd 27 16 pathogenesis pathogenesis NN cord-048471-7jszm1nd 27 17 and and CC cord-048471-7jszm1nd 27 18 replication replication NN cord-048471-7jszm1nd 27 19 . . . cord-048471-7jszm1nd 28 1 The the DT cord-048471-7jszm1nd 28 2 7.3 7.3 CD cord-048471-7jszm1nd 28 3 kb kb NNP cord-048471-7jszm1nd 28 4 polyadenylated polyadenylate VBD cord-048471-7jszm1nd 28 5 RNA RNA NNP cord-048471-7jszm1nd 28 6 genome genome NN cord-048471-7jszm1nd 28 7 of of IN cord-048471-7jszm1nd 28 8 JV JV NNP cord-048471-7jszm1nd 28 9 has have VBZ cord-048471-7jszm1nd 28 10 been be VBN cord-048471-7jszm1nd 28 11 characterised characterise VBN cord-048471-7jszm1nd 28 12 previously previously RB cord-048471-7jszm1nd 28 13 [ [ -LRB- cord-048471-7jszm1nd 28 14 7 7 CD cord-048471-7jszm1nd 28 15 ] ] -RRB- cord-048471-7jszm1nd 28 16 and and CC cord-048471-7jszm1nd 28 17 , , , cord-048471-7jszm1nd 28 18 like like IN cord-048471-7jszm1nd 28 19 other other JJ cord-048471-7jszm1nd 28 20 noroviruses noroviruse NNS cord-048471-7jszm1nd 28 21 , , , cord-048471-7jszm1nd 28 22 is be VBZ cord-048471-7jszm1nd 28 23 organised organise VBN cord-048471-7jszm1nd 28 24 into into IN cord-048471-7jszm1nd 28 25 3 3 CD cord-048471-7jszm1nd 28 26 open open JJ cord-048471-7jszm1nd 28 27 reading reading NN cord-048471-7jszm1nd 28 28 frames frame NNS cord-048471-7jszm1nd 28 29 ( ( -LRB- cord-048471-7jszm1nd 28 30 ORFs ORFs NNP cord-048471-7jszm1nd 28 31 ) ) -RRB- cord-048471-7jszm1nd 28 32 . . . cord-048471-7jszm1nd 29 1 ORF1 ORF1 NNP cord-048471-7jszm1nd 29 2 encodes encode VBZ cord-048471-7jszm1nd 29 3 the the DT cord-048471-7jszm1nd 29 4 non non JJ cord-048471-7jszm1nd 29 5 - - JJ cord-048471-7jszm1nd 29 6 structural structural JJ cord-048471-7jszm1nd 29 7 proteins protein NNS cord-048471-7jszm1nd 29 8 in in IN cord-048471-7jszm1nd 29 9 the the DT cord-048471-7jszm1nd 29 10 form form NN cord-048471-7jszm1nd 29 11 of of IN cord-048471-7jszm1nd 29 12 a a DT cord-048471-7jszm1nd 29 13 large large JJ cord-048471-7jszm1nd 29 14 185 185 CD cord-048471-7jszm1nd 29 15 kDa kDa NNP cord-048471-7jszm1nd 29 16 polyprotein polyprotein NNP cord-048471-7jszm1nd 29 17 , , , cord-048471-7jszm1nd 29 18 which which WDT cord-048471-7jszm1nd 29 19 is be VBZ cord-048471-7jszm1nd 29 20 subsequently subsequently RB cord-048471-7jszm1nd 29 21 cleaved cleave VBN cord-048471-7jszm1nd 29 22 into into IN cord-048471-7jszm1nd 29 23 functional functional JJ cord-048471-7jszm1nd 29 24 replication replication NN cord-048471-7jszm1nd 29 25 proteins protein NNS cord-048471-7jszm1nd 29 26 by by IN cord-048471-7jszm1nd 29 27 the the DT cord-048471-7jszm1nd 29 28 viral viral NN cord-048471-7jszm1nd 29 29 encoded encode VBN cord-048471-7jszm1nd 29 30 3C 3c NN cord-048471-7jszm1nd 29 31 - - HYPH cord-048471-7jszm1nd 29 32 like like JJ cord-048471-7jszm1nd 29 33 protease protease NN cord-048471-7jszm1nd 29 34 . . . cord-048471-7jszm1nd 30 1 ORF2 ORF2 NNP cord-048471-7jszm1nd 30 2 encodes encode VBZ cord-048471-7jszm1nd 30 3 the the DT cord-048471-7jszm1nd 30 4 structural structural JJ cord-048471-7jszm1nd 30 5 capsid capsid NN cord-048471-7jszm1nd 30 6 protein protein NN cord-048471-7jszm1nd 30 7 ( ( -LRB- cord-048471-7jszm1nd 30 8 56 56 CD cord-048471-7jszm1nd 30 9 kDa kDa NNPS cord-048471-7jszm1nd 30 10 ) ) -RRB- cord-048471-7jszm1nd 30 11 and and CC cord-048471-7jszm1nd 30 12 ORF3 ORF3 NNP cord-048471-7jszm1nd 30 13 encodes encode VBZ cord-048471-7jszm1nd 30 14 a a DT cord-048471-7jszm1nd 30 15 small small JJ cord-048471-7jszm1nd 30 16 basic basic JJ cord-048471-7jszm1nd 30 17 protein protein NN cord-048471-7jszm1nd 30 18 , , , cord-048471-7jszm1nd 30 19 which which WDT cord-048471-7jszm1nd 30 20 has have VBZ cord-048471-7jszm1nd 30 21 been be VBN cord-048471-7jszm1nd 30 22 shown show VBN cord-048471-7jszm1nd 30 23 to to TO cord-048471-7jszm1nd 30 24 function function VB cord-048471-7jszm1nd 30 25 as as IN cord-048471-7jszm1nd 30 26 a a DT cord-048471-7jszm1nd 30 27 minor minor JJ cord-048471-7jszm1nd 30 28 capsid capsid NN cord-048471-7jszm1nd 30 29 component component NN cord-048471-7jszm1nd 30 30 [ [ -LRB- cord-048471-7jszm1nd 30 31 8 8 CD cord-048471-7jszm1nd 30 32 ] ] -RRB- cord-048471-7jszm1nd 30 33 . . . cord-048471-7jszm1nd 31 1 JV JV NNP cord-048471-7jszm1nd 31 2 ORF1 ORF1 NNP cord-048471-7jszm1nd 31 3 is be VBZ cord-048471-7jszm1nd 31 4 consistent consistent JJ cord-048471-7jszm1nd 31 5 with with IN cord-048471-7jszm1nd 31 6 other other JJ cord-048471-7jszm1nd 31 7 caliciviruses caliciviruse NNS cord-048471-7jszm1nd 31 8 in in IN cord-048471-7jszm1nd 31 9 that that IN cord-048471-7jszm1nd 31 10 it -PRON- PRP cord-048471-7jszm1nd 31 11 encodes encode VBZ cord-048471-7jszm1nd 31 12 a a DT cord-048471-7jszm1nd 31 13 39 39 CD cord-048471-7jszm1nd 31 14 kDa kDa NNP cord-048471-7jszm1nd 31 15 2C 2c NN cord-048471-7jszm1nd 31 16 - - HYPH cord-048471-7jszm1nd 31 17 like like JJ cord-048471-7jszm1nd 31 18 nucleoside nucleoside NN cord-048471-7jszm1nd 31 19 triphosphatase triphosphatase NN cord-048471-7jszm1nd 31 20 ( ( -LRB- cord-048471-7jszm1nd 31 21 NTPase NTPase NNP cord-048471-7jszm1nd 31 22 ) ) -RRB- cord-048471-7jszm1nd 31 23 , , , cord-048471-7jszm1nd 31 24 a a DT cord-048471-7jszm1nd 31 25 3C 3c NN cord-048471-7jszm1nd 31 26 - - HYPH cord-048471-7jszm1nd 31 27 like like JJ cord-048471-7jszm1nd 31 28 protease protease NN cord-048471-7jszm1nd 31 29 and and CC cord-048471-7jszm1nd 31 30 a a DT cord-048471-7jszm1nd 31 31 56 56 CD cord-048471-7jszm1nd 31 32 kDa kDa NNP cord-048471-7jszm1nd 31 33 3D 3D NNP cord-048471-7jszm1nd 31 34 - - HYPH cord-048471-7jszm1nd 31 35 like like JJ cord-048471-7jszm1nd 31 36 RNA RNA NNP cord-048471-7jszm1nd 31 37 - - HYPH cord-048471-7jszm1nd 31 38 dependent dependent JJ cord-048471-7jszm1nd 31 39 RNA RNA NNP cord-048471-7jszm1nd 31 40 polymerase polymerase NN cord-048471-7jszm1nd 31 41 [ [ -LRB- cord-048471-7jszm1nd 31 42 7 7 CD cord-048471-7jszm1nd 31 43 , , , cord-048471-7jszm1nd 31 44 [ [ -LRB- cord-048471-7jszm1nd 31 45 9 9 CD cord-048471-7jszm1nd 31 46 ] ] -RRB- cord-048471-7jszm1nd 31 47 [ [ -LRB- cord-048471-7jszm1nd 31 48 10 10 CD cord-048471-7jszm1nd 31 49 ] ] -RRB- cord-048471-7jszm1nd 31 50 [ [ -LRB- cord-048471-7jszm1nd 31 51 11 11 CD cord-048471-7jszm1nd 31 52 ] ] -RRB- cord-048471-7jszm1nd 31 53 [ [ -LRB- cord-048471-7jszm1nd 31 54 12 12 CD cord-048471-7jszm1nd 31 55 ] ] -RRB- cord-048471-7jszm1nd 31 56 [ [ -LRB- cord-048471-7jszm1nd 31 57 13 13 CD cord-048471-7jszm1nd 31 58 ] ] -RRB- cord-048471-7jszm1nd 31 59 . . . cord-048471-7jszm1nd 32 1 However however RB cord-048471-7jszm1nd 32 2 , , , cord-048471-7jszm1nd 32 3 the the DT cord-048471-7jszm1nd 32 4 genomic genomic JJ cord-048471-7jszm1nd 32 5 sequence sequence NN cord-048471-7jszm1nd 32 6 within within IN cord-048471-7jszm1nd 32 7 the the DT cord-048471-7jszm1nd 32 8 59 59 CD cord-048471-7jszm1nd 32 9 region region NN cord-048471-7jszm1nd 32 10 of of IN cord-048471-7jszm1nd 32 11 JV JV NNP cord-048471-7jszm1nd 32 12 ORF1 ORF1 NNP cord-048471-7jszm1nd 32 13 ( ( -LRB- cord-048471-7jszm1nd 32 14 59GS 59gs CD cord-048471-7jszm1nd 32 15 ) ) -RRB- cord-048471-7jszm1nd 32 16 displays display VBZ cord-048471-7jszm1nd 32 17 a a DT cord-048471-7jszm1nd 32 18 high high JJ cord-048471-7jszm1nd 32 19 level level NN cord-048471-7jszm1nd 32 20 of of IN cord-048471-7jszm1nd 32 21 divergence divergence NN cord-048471-7jszm1nd 32 22 . . . cord-048471-7jszm1nd 33 1 This this DT cord-048471-7jszm1nd 33 2 divergence divergence NN cord-048471-7jszm1nd 33 3 is be VBZ cord-048471-7jszm1nd 33 4 mainly mainly RB cord-048471-7jszm1nd 33 5 attributed attribute VBN cord-048471-7jszm1nd 33 6 to to IN cord-048471-7jszm1nd 33 7 the the DT cord-048471-7jszm1nd 33 8 presence presence NN cord-048471-7jszm1nd 33 9 of of IN cord-048471-7jszm1nd 33 10 several several JJ cord-048471-7jszm1nd 33 11 proline proline NN cord-048471-7jszm1nd 33 12 - - HYPH cord-048471-7jszm1nd 33 13 encoding encode VBG cord-048471-7jszm1nd 33 14 polypyrimidine polypyrimidine JJ cord-048471-7jszm1nd 33 15 tracts tract NNS cord-048471-7jszm1nd 33 16 within within IN cord-048471-7jszm1nd 33 17 the the DT cord-048471-7jszm1nd 33 18 region region NN cord-048471-7jszm1nd 33 19 predicted predict VBD cord-048471-7jszm1nd 33 20 to to TO cord-048471-7jszm1nd 33 21 encode encode VB cord-048471-7jszm1nd 33 22 a a DT cord-048471-7jszm1nd 33 23 35 35 CD cord-048471-7jszm1nd 33 24 kDa kDa NNP cord-048471-7jszm1nd 33 25 Nterminal Nterminal NNP cord-048471-7jszm1nd 33 26 protein protein NN cord-048471-7jszm1nd 33 27 [ [ -LRB- cord-048471-7jszm1nd 33 28 7 7 CD cord-048471-7jszm1nd 33 29 ] ] -RRB- cord-048471-7jszm1nd 33 30 . . . cord-048471-7jszm1nd 34 1 The the DT cord-048471-7jszm1nd 34 2 predicted predict VBN cord-048471-7jszm1nd 34 3 size size NN cord-048471-7jszm1nd 34 4 of of IN cord-048471-7jszm1nd 34 5 N n CD cord-048471-7jszm1nd 34 6 - - HYPH cord-048471-7jszm1nd 34 7 terminal terminal NN cord-048471-7jszm1nd 34 8 proteins protein NNS cord-048471-7jszm1nd 34 9 relative relative JJ cord-048471-7jszm1nd 34 10 to to IN cord-048471-7jszm1nd 34 11 the the DT cord-048471-7jszm1nd 34 12 size size NN cord-048471-7jszm1nd 34 13 of of IN cord-048471-7jszm1nd 34 14 the the DT cord-048471-7jszm1nd 34 15 respective respective JJ cord-048471-7jszm1nd 34 16 2C 2c NN cord-048471-7jszm1nd 34 17 proteins protein NNS cord-048471-7jszm1nd 34 18 differs differ VBZ cord-048471-7jszm1nd 34 19 within within IN cord-048471-7jszm1nd 34 20 the the DT cord-048471-7jszm1nd 34 21 norovirus norovirus NN cord-048471-7jszm1nd 34 22 genus genus NN cord-048471-7jszm1nd 34 23 . . . cord-048471-7jszm1nd 35 1 Within within IN cord-048471-7jszm1nd 35 2 the the DT cord-048471-7jszm1nd 35 3 GI GI NNP cord-048471-7jszm1nd 35 4 noroviruses noroviruse NNS cord-048471-7jszm1nd 35 5 , , , cord-048471-7jszm1nd 35 6 such such JJ cord-048471-7jszm1nd 35 7 as as IN cord-048471-7jszm1nd 35 8 Southampton Southampton NNP cord-048471-7jszm1nd 35 9 virus virus NN cord-048471-7jszm1nd 35 10 , , , cord-048471-7jszm1nd 35 11 the the DT cord-048471-7jszm1nd 35 12 N n CD cord-048471-7jszm1nd 35 13 - - HYPH cord-048471-7jszm1nd 35 14 terminal terminal NN cord-048471-7jszm1nd 35 15 protein protein NN cord-048471-7jszm1nd 35 16 ( ( -LRB- cord-048471-7jszm1nd 35 17 44.8 44.8 CD cord-048471-7jszm1nd 35 18 kDa kDa NNPS cord-048471-7jszm1nd 35 19 ) ) -RRB- cord-048471-7jszm1nd 35 20 is be VBZ cord-048471-7jszm1nd 35 21 larger large JJR cord-048471-7jszm1nd 35 22 in in IN cord-048471-7jszm1nd 35 23 size size NN cord-048471-7jszm1nd 35 24 compared compare VBN cord-048471-7jszm1nd 35 25 to to IN cord-048471-7jszm1nd 35 26 the the DT cord-048471-7jszm1nd 35 27 2C 2C NNP cord-048471-7jszm1nd 35 28 protein protein NNP cord-048471-7jszm1nd 35 29 ( ( -LRB- cord-048471-7jszm1nd 35 30 39.6 39.6 CD cord-048471-7jszm1nd 35 31 kDa kDa NNPS cord-048471-7jszm1nd 35 32 ) ) -RRB- cord-048471-7jszm1nd 35 33 . . . cord-048471-7jszm1nd 36 1 This this DT cord-048471-7jszm1nd 36 2 is be VBZ cord-048471-7jszm1nd 36 3 in in IN cord-048471-7jszm1nd 36 4 contrast contrast NN cord-048471-7jszm1nd 36 5 to to IN cord-048471-7jszm1nd 36 6 the the DT cord-048471-7jszm1nd 36 7 GII GII NNP cord-048471-7jszm1nd 36 8 noroviruses noroviruse NNS cord-048471-7jszm1nd 36 9 , , , cord-048471-7jszm1nd 36 10 such such JJ cord-048471-7jszm1nd 36 11 as as IN cord-048471-7jszm1nd 36 12 Lordsdale Lordsdale NNP cord-048471-7jszm1nd 36 13 virus virus NN cord-048471-7jszm1nd 36 14 and and CC cord-048471-7jszm1nd 36 15 Camberwell Camberwell NNP cord-048471-7jszm1nd 36 16 virus virus NN cord-048471-7jszm1nd 36 17 , , , cord-048471-7jszm1nd 36 18 in in IN cord-048471-7jszm1nd 36 19 that that DT cord-048471-7jszm1nd 36 20 the the DT cord-048471-7jszm1nd 36 21 N n CD cord-048471-7jszm1nd 36 22 - - HYPH cord-048471-7jszm1nd 36 23 terminal terminal NN cord-048471-7jszm1nd 36 24 protein protein NN cord-048471-7jszm1nd 36 25 is be VBZ cord-048471-7jszm1nd 36 26 smaller small JJR cord-048471-7jszm1nd 36 27 in in IN cord-048471-7jszm1nd 36 28 size size NN cord-048471-7jszm1nd 36 29 compared compare VBN cord-048471-7jszm1nd 36 30 to to IN cord-048471-7jszm1nd 36 31 the the DT cord-048471-7jszm1nd 36 32 2C 2C NNP cord-048471-7jszm1nd 36 33 protein protein NNP cord-048471-7jszm1nd 36 34 [ [ -LRB- cord-048471-7jszm1nd 36 35 11 11 CD cord-048471-7jszm1nd 36 36 , , , cord-048471-7jszm1nd 36 37 14 14 CD cord-048471-7jszm1nd 36 38 ] ] -RRB- cord-048471-7jszm1nd 36 39 . . . cord-048471-7jszm1nd 37 1 This this DT cord-048471-7jszm1nd 37 2 is be VBZ cord-048471-7jszm1nd 37 3 also also RB cord-048471-7jszm1nd 37 4 the the DT cord-048471-7jszm1nd 37 5 case case NN cord-048471-7jszm1nd 37 6 for for IN cord-048471-7jszm1nd 37 7 Jena Jena NNP cord-048471-7jszm1nd 37 8 virus virus NN cord-048471-7jszm1nd 37 9 in in IN cord-048471-7jszm1nd 37 10 which which WDT cord-048471-7jszm1nd 37 11 the the DT cord-048471-7jszm1nd 37 12 predicted predict VBN cord-048471-7jszm1nd 37 13 JV JV NNP cord-048471-7jszm1nd 37 14 N N NNP cord-048471-7jszm1nd 37 15 - - HYPH cord-048471-7jszm1nd 37 16 terminal terminal NN cord-048471-7jszm1nd 37 17 protein protein NN cord-048471-7jszm1nd 37 18 ( ( -LRB- cord-048471-7jszm1nd 37 19 35 35 CD cord-048471-7jszm1nd 37 20 kDa kDa NNS cord-048471-7jszm1nd 37 21 ) ) -RRB- cord-048471-7jszm1nd 37 22 is be VBZ cord-048471-7jszm1nd 37 23 smaller small JJR cord-048471-7jszm1nd 37 24 than than IN cord-048471-7jszm1nd 37 25 the the DT cord-048471-7jszm1nd 37 26 JV JV NNP cord-048471-7jszm1nd 37 27 2C 2c NN cord-048471-7jszm1nd 37 28 protein protein NN cord-048471-7jszm1nd 37 29 ( ( -LRB- cord-048471-7jszm1nd 37 30 39 39 CD cord-048471-7jszm1nd 37 31 kDa kDa NNS cord-048471-7jszm1nd 37 32 ) ) -RRB- cord-048471-7jszm1nd 37 33 [ [ -LRB- cord-048471-7jszm1nd 37 34 7 7 CD cord-048471-7jszm1nd 37 35 ] ] -RRB- cord-048471-7jszm1nd 37 36 . . . cord-048471-7jszm1nd 38 1 The the DT cord-048471-7jszm1nd 38 2 norovirus norovirus NN cord-048471-7jszm1nd 38 3 N n CD cord-048471-7jszm1nd 38 4 - - HYPH cord-048471-7jszm1nd 38 5 terminal terminal JJ cord-048471-7jszm1nd 38 6 protein protein NN cord-048471-7jszm1nd 38 7 varies vary VBZ cord-048471-7jszm1nd 38 8 in in IN cord-048471-7jszm1nd 38 9 relative relative JJ cord-048471-7jszm1nd 38 10 size size NN cord-048471-7jszm1nd 38 11 across across IN cord-048471-7jszm1nd 38 12 the the DT cord-048471-7jszm1nd 38 13 genus genus NN cord-048471-7jszm1nd 38 14 , , , cord-048471-7jszm1nd 38 15 and and CC cord-048471-7jszm1nd 38 16 the the DT cord-048471-7jszm1nd 38 17 encoding encoding NN cord-048471-7jszm1nd 38 18 sequence sequence NN cord-048471-7jszm1nd 38 19 bears bear VBZ cord-048471-7jszm1nd 38 20 no no DT cord-048471-7jszm1nd 38 21 similarity similarity NN cord-048471-7jszm1nd 38 22 to to IN cord-048471-7jszm1nd 38 23 other other JJ cord-048471-7jszm1nd 38 24 cellular cellular JJ cord-048471-7jszm1nd 38 25 or or CC cord-048471-7jszm1nd 38 26 viral viral JJ cord-048471-7jszm1nd 38 27 proteins protein NNS cord-048471-7jszm1nd 38 28 . . . cord-048471-7jszm1nd 39 1 Alignment alignment NN cord-048471-7jszm1nd 39 2 of of IN cord-048471-7jszm1nd 39 3 the the DT cord-048471-7jszm1nd 39 4 N n CD cord-048471-7jszm1nd 39 5 - - HYPH cord-048471-7jszm1nd 39 6 term term NN cord-048471-7jszm1nd 39 7 protein protein NN cord-048471-7jszm1nd 39 8 sequences sequence NNS cord-048471-7jszm1nd 39 9 of of IN cord-048471-7jszm1nd 39 10 various various JJ cord-048471-7jszm1nd 39 11 noroviruses noroviruse NNS cord-048471-7jszm1nd 39 12 indicates indicate VBZ cord-048471-7jszm1nd 39 13 little little JJ cord-048471-7jszm1nd 39 14 similarity similarity NN cord-048471-7jszm1nd 39 15 between between IN cord-048471-7jszm1nd 39 16 genogroups genogroup NNS cord-048471-7jszm1nd 39 17 within within IN cord-048471-7jszm1nd 39 18 the the DT cord-048471-7jszm1nd 39 19 first first JJ cord-048471-7jszm1nd 39 20 180 180 CD cord-048471-7jszm1nd 39 21 residues residue NNS cord-048471-7jszm1nd 39 22 , , , cord-048471-7jszm1nd 39 23 however however RB cord-048471-7jszm1nd 39 24 towards towards IN cord-048471-7jszm1nd 39 25 the the DT cord-048471-7jszm1nd 39 26 Cterminal Cterminal NNP cord-048471-7jszm1nd 39 27 end end NN cord-048471-7jszm1nd 39 28 of of IN cord-048471-7jszm1nd 39 29 the the DT cord-048471-7jszm1nd 39 30 protein protein NN cord-048471-7jszm1nd 39 31 similarity similarity NN cord-048471-7jszm1nd 39 32 between between IN cord-048471-7jszm1nd 39 33 the the DT cord-048471-7jszm1nd 39 34 amino amino NN cord-048471-7jszm1nd 39 35 acid acid NN cord-048471-7jszm1nd 39 36 residues residue NNS cord-048471-7jszm1nd 39 37 increases increase NNS cord-048471-7jszm1nd 39 38 . . . cord-048471-7jszm1nd 40 1 Recent recent JJ cord-048471-7jszm1nd 40 2 studies study NNS cord-048471-7jszm1nd 40 3 investigating investigate VBG cord-048471-7jszm1nd 40 4 the the DT cord-048471-7jszm1nd 40 5 functions function NNS cord-048471-7jszm1nd 40 6 of of IN cord-048471-7jszm1nd 40 7 the the DT cord-048471-7jszm1nd 40 8 Norwalk Norwalk NNP cord-048471-7jszm1nd 40 9 virus virus NN cord-048471-7jszm1nd 40 10 N n CD cord-048471-7jszm1nd 40 11 - - HYPH cord-048471-7jszm1nd 40 12 terminal terminal NN cord-048471-7jszm1nd 40 13 protein protein NN cord-048471-7jszm1nd 40 14 have have VBP cord-048471-7jszm1nd 40 15 successfully successfully RB cord-048471-7jszm1nd 40 16 demonstrated demonstrate VBN cord-048471-7jszm1nd 40 17 association association NN cord-048471-7jszm1nd 40 18 with with IN cord-048471-7jszm1nd 40 19 the the DT cord-048471-7jszm1nd 40 20 Golgi Golgi NNP cord-048471-7jszm1nd 40 21 apparatus apparatus NN cord-048471-7jszm1nd 40 22 in in IN cord-048471-7jszm1nd 40 23 transfected transfecte VBN cord-048471-7jszm1nd 40 24 cells cell NNS cord-048471-7jszm1nd 40 25 [ [ -LRB- cord-048471-7jszm1nd 40 26 15 15 CD cord-048471-7jszm1nd 40 27 ] ] -RRB- cord-048471-7jszm1nd 40 28 . . . cord-048471-7jszm1nd 41 1 In in IN cord-048471-7jszm1nd 41 2 addition addition NN cord-048471-7jszm1nd 41 3 this this DT cord-048471-7jszm1nd 41 4 study study NN cord-048471-7jszm1nd 41 5 also also RB cord-048471-7jszm1nd 41 6 identified identify VBD cord-048471-7jszm1nd 41 7 a a DT cord-048471-7jszm1nd 41 8 picornaviral picornaviral JJ cord-048471-7jszm1nd 41 9 2B 2B NNP cord-048471-7jszm1nd 41 10 like like IN cord-048471-7jszm1nd 41 11 region region NN cord-048471-7jszm1nd 41 12 within within IN cord-048471-7jszm1nd 41 13 the the DT cord-048471-7jszm1nd 41 14 N n CD cord-048471-7jszm1nd 41 15 - - HYPH cord-048471-7jszm1nd 41 16 terminal terminal NN cord-048471-7jszm1nd 41 17 protein protein NN cord-048471-7jszm1nd 41 18 , , , cord-048471-7jszm1nd 41 19 suggesting suggest VBG cord-048471-7jszm1nd 41 20 that that IN cord-048471-7jszm1nd 41 21 the the DT cord-048471-7jszm1nd 41 22 protein protein NN cord-048471-7jszm1nd 41 23 is be VBZ cord-048471-7jszm1nd 41 24 involved involve VBN cord-048471-7jszm1nd 41 25 with with IN cord-048471-7jszm1nd 41 26 host host NN cord-048471-7jszm1nd 41 27 cell cell NN cord-048471-7jszm1nd 41 28 membrane membrane NN cord-048471-7jszm1nd 41 29 interactions interaction NNS cord-048471-7jszm1nd 41 30 , , , cord-048471-7jszm1nd 41 31 reinforcing reinforce VBG cord-048471-7jszm1nd 41 32 other other JJ cord-048471-7jszm1nd 41 33 findings finding NNS cord-048471-7jszm1nd 41 34 that that WDT cord-048471-7jszm1nd 41 35 have have VBP cord-048471-7jszm1nd 41 36 suggested suggest VBN cord-048471-7jszm1nd 41 37 that that IN cord-048471-7jszm1nd 41 38 the the DT cord-048471-7jszm1nd 41 39 Norwalk Norwalk NNP cord-048471-7jszm1nd 41 40 virus virus NN cord-048471-7jszm1nd 41 41 N n CD cord-048471-7jszm1nd 41 42 - - HYPH cord-048471-7jszm1nd 41 43 terminal terminal NN cord-048471-7jszm1nd 41 44 protein protein NN cord-048471-7jszm1nd 41 45 disrupts disrupt VBZ cord-048471-7jszm1nd 41 46 intracellular intracellular JJ cord-048471-7jszm1nd 41 47 protein protein NN cord-048471-7jszm1nd 41 48 trafficking trafficking NN cord-048471-7jszm1nd 41 49 , , , cord-048471-7jszm1nd 41 50 including include VBG cord-048471-7jszm1nd 41 51 proteins protein NNS cord-048471-7jszm1nd 41 52 destined destine VBN cord-048471-7jszm1nd 41 53 for for IN cord-048471-7jszm1nd 41 54 the the DT cord-048471-7jszm1nd 41 55 host host NN cord-048471-7jszm1nd 41 56 cell cell NN cord-048471-7jszm1nd 41 57 membrane membrane NN cord-048471-7jszm1nd 41 58 [ [ -LRB- cord-048471-7jszm1nd 41 59 16 16 CD cord-048471-7jszm1nd 41 60 ] ] -RRB- cord-048471-7jszm1nd 41 61 . . . cord-048471-7jszm1nd 42 1 A a DT cord-048471-7jszm1nd 42 2 3C 3c NN cord-048471-7jszm1nd 42 3 protease protease NN cord-048471-7jszm1nd 42 4 - - HYPH cord-048471-7jszm1nd 42 5 mediated mediate VBN cord-048471-7jszm1nd 42 6 cleavage cleavage NN cord-048471-7jszm1nd 42 7 event event NN cord-048471-7jszm1nd 42 8 within within IN cord-048471-7jszm1nd 42 9 the the DT cord-048471-7jszm1nd 42 10 N n CD cord-048471-7jszm1nd 42 11 - - HYPH cord-048471-7jszm1nd 42 12 terminal terminal NN cord-048471-7jszm1nd 42 13 protein protein NN cord-048471-7jszm1nd 42 14 ( ( -LRB- cord-048471-7jszm1nd 42 15 37 37 CD cord-048471-7jszm1nd 42 16 kDa kDa NNS cord-048471-7jszm1nd 42 17 ) ) -RRB- cord-048471-7jszm1nd 42 18 was be VBD cord-048471-7jszm1nd 42 19 described describe VBN cord-048471-7jszm1nd 42 20 for for IN cord-048471-7jszm1nd 42 21 Camberwell Camberwell NNP cord-048471-7jszm1nd 42 22 virus virus NN cord-048471-7jszm1nd 42 23 , , , cord-048471-7jszm1nd 42 24 a a DT cord-048471-7jszm1nd 42 25 genogroup genogroup NN cord-048471-7jszm1nd 42 26 2 2 CD cord-048471-7jszm1nd 42 27 norovirus norovirus NN cord-048471-7jszm1nd 42 28 , , , cord-048471-7jszm1nd 42 29 yielding yield VBG cord-048471-7jszm1nd 42 30 proteins protein NNS cord-048471-7jszm1nd 42 31 of of IN cord-048471-7jszm1nd 42 32 22 22 CD cord-048471-7jszm1nd 42 33 kDa kDa NNS cord-048471-7jszm1nd 42 34 and and CC cord-048471-7jszm1nd 42 35 15 15 CD cord-048471-7jszm1nd 42 36 kDa kDa NNPS cord-048471-7jszm1nd 42 37 [ [ -LRB- cord-048471-7jszm1nd 42 38 17 17 CD cord-048471-7jszm1nd 42 39 ] ] -RRB- cord-048471-7jszm1nd 42 40 . . . cord-048471-7jszm1nd 43 1 Based base VBN cord-048471-7jszm1nd 43 2 on on IN cord-048471-7jszm1nd 43 3 these these DT cord-048471-7jszm1nd 43 4 observations observation NNS cord-048471-7jszm1nd 43 5 and and CC cord-048471-7jszm1nd 43 6 location location NN cord-048471-7jszm1nd 43 7 within within IN cord-048471-7jszm1nd 43 8 the the DT cord-048471-7jszm1nd 43 9 genome genome NN cord-048471-7jszm1nd 43 10 it -PRON- PRP cord-048471-7jszm1nd 43 11 was be VBD cord-048471-7jszm1nd 43 12 hypothesised hypothesise VBN cord-048471-7jszm1nd 43 13 that that IN cord-048471-7jszm1nd 43 14 the the DT cord-048471-7jszm1nd 43 15 Nterminal Nterminal NNP cord-048471-7jszm1nd 43 16 protein protein NN cord-048471-7jszm1nd 43 17 of of IN cord-048471-7jszm1nd 43 18 noroviruses noroviruses NNP cord-048471-7jszm1nd 43 19 corresponds correspond VBZ cord-048471-7jszm1nd 43 20 to to IN cord-048471-7jszm1nd 43 21 the the DT cord-048471-7jszm1nd 43 22 2AB 2ab CD cord-048471-7jszm1nd 43 23 region region NN cord-048471-7jszm1nd 43 24 in in IN cord-048471-7jszm1nd 43 25 picornaviruses picornavirus NNS cord-048471-7jszm1nd 43 26 . . . cord-048471-7jszm1nd 44 1 Another another DT cord-048471-7jszm1nd 44 2 possibility possibility NN cord-048471-7jszm1nd 44 3 is be VBZ cord-048471-7jszm1nd 44 4 that that IN cord-048471-7jszm1nd 44 5 the the DT cord-048471-7jszm1nd 44 6 N n CD cord-048471-7jszm1nd 44 7 - - HYPH cord-048471-7jszm1nd 44 8 term term NN cord-048471-7jszm1nd 44 9 encoding encode VBG cord-048471-7jszm1nd 44 10 RNA RNA NNP cord-048471-7jszm1nd 44 11 itself -PRON- PRP cord-048471-7jszm1nd 44 12 serves serve VBZ cord-048471-7jszm1nd 44 13 to to TO cord-048471-7jszm1nd 44 14 function function VB cord-048471-7jszm1nd 44 15 as as IN cord-048471-7jszm1nd 44 16 a a DT cord-048471-7jszm1nd 44 17 translational translational JJ cord-048471-7jszm1nd 44 18 enhancer enhancer NN cord-048471-7jszm1nd 44 19 by by IN cord-048471-7jszm1nd 44 20 interacting interact VBG cord-048471-7jszm1nd 44 21 with with IN cord-048471-7jszm1nd 44 22 cellular cellular JJ cord-048471-7jszm1nd 44 23 proteins protein NNS cord-048471-7jszm1nd 44 24 involved involve VBN cord-048471-7jszm1nd 44 25 in in IN cord-048471-7jszm1nd 44 26 translation translation NN cord-048471-7jszm1nd 44 27 . . . cord-048471-7jszm1nd 45 1 Indeed indeed RB cord-048471-7jszm1nd 45 2 , , , cord-048471-7jszm1nd 45 3 this this DT cord-048471-7jszm1nd 45 4 phenomenon phenomenon NN cord-048471-7jszm1nd 45 5 has have VBZ cord-048471-7jszm1nd 45 6 been be VBN cord-048471-7jszm1nd 45 7 previously previously RB cord-048471-7jszm1nd 45 8 reported report VBN cord-048471-7jszm1nd 45 9 for for IN cord-048471-7jszm1nd 45 10 Norwalk Norwalk NNP cord-048471-7jszm1nd 45 11 virus virus NN cord-048471-7jszm1nd 45 12 , , , cord-048471-7jszm1nd 45 13 within within IN cord-048471-7jszm1nd 45 14 which which WDT cord-048471-7jszm1nd 45 15 a a DT cord-048471-7jszm1nd 45 16 double double JJ cord-048471-7jszm1nd 45 17 stem stem NN cord-048471-7jszm1nd 45 18 loop loop NN cord-048471-7jszm1nd 45 19 structure structure NN cord-048471-7jszm1nd 45 20 has have VBZ cord-048471-7jszm1nd 45 21 been be VBN cord-048471-7jszm1nd 45 22 predicted predict VBN cord-048471-7jszm1nd 45 23 at at IN cord-048471-7jszm1nd 45 24 the the DT cord-048471-7jszm1nd 45 25 59 59 CD cord-048471-7jszm1nd 45 26 end end NN cord-048471-7jszm1nd 45 27 of of IN cord-048471-7jszm1nd 45 28 the the DT cord-048471-7jszm1nd 45 29 genomic genomic JJ cord-048471-7jszm1nd 45 30 RNA RNA NNP cord-048471-7jszm1nd 45 31 [ [ -LRB- cord-048471-7jszm1nd 45 32 18 18 CD cord-048471-7jszm1nd 45 33 ] ] -RRB- cord-048471-7jszm1nd 45 34 . . . cord-048471-7jszm1nd 46 1 It -PRON- PRP cord-048471-7jszm1nd 46 2 was be VBD cord-048471-7jszm1nd 46 3 subsequently subsequently RB cord-048471-7jszm1nd 46 4 demonstrated demonstrate VBN cord-048471-7jszm1nd 46 5 that that IN cord-048471-7jszm1nd 46 6 elements element NNS cord-048471-7jszm1nd 46 7 within within IN cord-048471-7jszm1nd 46 8 the the DT cord-048471-7jszm1nd 46 9 59 59 CD cord-048471-7jszm1nd 46 10 end end NN cord-048471-7jszm1nd 46 11 of of IN cord-048471-7jszm1nd 46 12 Norwalk Norwalk NNP cord-048471-7jszm1nd 46 13 virus virus NN cord-048471-7jszm1nd 46 14 bind bind VBP cord-048471-7jszm1nd 46 15 specifically specifically RB cord-048471-7jszm1nd 46 16 with with IN cord-048471-7jszm1nd 46 17 cellular cellular JJ cord-048471-7jszm1nd 46 18 proteins protein NNS cord-048471-7jszm1nd 46 19 such such JJ cord-048471-7jszm1nd 46 20 as as IN cord-048471-7jszm1nd 46 21 La La NNP cord-048471-7jszm1nd 46 22 , , , cord-048471-7jszm1nd 46 23 PTB PTB NNP cord-048471-7jszm1nd 46 24 and and CC cord-048471-7jszm1nd 46 25 PCBP2 PCBP2 NNP cord-048471-7jszm1nd 46 26 [ [ -LRB- cord-048471-7jszm1nd 46 27 19 19 CD cord-048471-7jszm1nd 46 28 ] ] -RRB- cord-048471-7jszm1nd 46 29 which which WDT cord-048471-7jszm1nd 46 30 have have VBP cord-048471-7jszm1nd 46 31 all all DT cord-048471-7jszm1nd 46 32 been be VBN cord-048471-7jszm1nd 46 33 implicated implicate VBN cord-048471-7jszm1nd 46 34 in in IN cord-048471-7jszm1nd 46 35 IRES IRES NNP cord-048471-7jszm1nd 46 36 - - HYPH cord-048471-7jszm1nd 46 37 mediated mediate VBN cord-048471-7jszm1nd 46 38 cap cap NN cord-048471-7jszm1nd 46 39 - - HYPH cord-048471-7jszm1nd 46 40 independent independent JJ cord-048471-7jszm1nd 46 41 translation translation NN cord-048471-7jszm1nd 46 42 in in IN cord-048471-7jszm1nd 46 43 the the DT cord-048471-7jszm1nd 46 44 closely closely RB cord-048471-7jszm1nd 46 45 related relate VBN cord-048471-7jszm1nd 46 46 picornaviruses picornavirus NNS cord-048471-7jszm1nd 46 47 [ [ -LRB- cord-048471-7jszm1nd 46 48 20 20 CD cord-048471-7jszm1nd 46 49 ] ] -RRB- cord-048471-7jszm1nd 46 50 [ [ -LRB- cord-048471-7jszm1nd 46 51 21 21 CD cord-048471-7jszm1nd 46 52 ] ] -RRB- cord-048471-7jszm1nd 47 1 [ [ -LRB- cord-048471-7jszm1nd 47 2 22 22 CD cord-048471-7jszm1nd 47 3 ] ] -RRB- cord-048471-7jszm1nd 47 4 [ [ -LRB- cord-048471-7jszm1nd 47 5 23 23 CD cord-048471-7jszm1nd 47 6 ] ] -RRB- cord-048471-7jszm1nd 47 7 . . . cord-048471-7jszm1nd 48 1 In in IN cord-048471-7jszm1nd 48 2 this this DT cord-048471-7jszm1nd 48 3 study study NN cord-048471-7jszm1nd 48 4 the the DT cord-048471-7jszm1nd 48 5 role role NN cord-048471-7jszm1nd 48 6 of of IN cord-048471-7jszm1nd 48 7 the the DT cord-048471-7jszm1nd 48 8 JV JV NNP cord-048471-7jszm1nd 48 9 59GS 59gs CD cord-048471-7jszm1nd 48 10 was be VBD cord-048471-7jszm1nd 48 11 investigated investigate VBN cord-048471-7jszm1nd 48 12 , , , cord-048471-7jszm1nd 48 13 including include VBG cord-048471-7jszm1nd 48 14 its -PRON- PRP$ cord-048471-7jszm1nd 48 15 potential potential NN cord-048471-7jszm1nd 48 16 to to IN cord-048471-7jszm1nd 48 17 direct direct JJ cord-048471-7jszm1nd 48 18 capindependent capindependent JJ cord-048471-7jszm1nd 48 19 translation translation NN cord-048471-7jszm1nd 48 20 initiation initiation NN cord-048471-7jszm1nd 48 21 . . . cord-048471-7jszm1nd 49 1 The the DT cord-048471-7jszm1nd 49 2 precise precise JJ cord-048471-7jszm1nd 49 3 location location NN cord-048471-7jszm1nd 49 4 of of IN cord-048471-7jszm1nd 49 5 translation translation NN cord-048471-7jszm1nd 49 6 initiation initiation NN cord-048471-7jszm1nd 49 7 in in IN cord-048471-7jszm1nd 49 8 JV JV NNP cord-048471-7jszm1nd 49 9 was be VBD cord-048471-7jszm1nd 49 10 also also RB cord-048471-7jszm1nd 49 11 investigated investigate VBN cord-048471-7jszm1nd 49 12 . . . cord-048471-7jszm1nd 50 1 Previous previous JJ cord-048471-7jszm1nd 50 2 studies study NNS cord-048471-7jszm1nd 50 3 of of IN cord-048471-7jszm1nd 50 4 norovirus norovirus NNP cord-048471-7jszm1nd 50 5 polyprotein polyprotein NNP cord-048471-7jszm1nd 50 6 processing processing NN cord-048471-7jszm1nd 50 7 have have VBP cord-048471-7jszm1nd 50 8 yielded yield VBN cord-048471-7jszm1nd 50 9 three three CD cord-048471-7jszm1nd 50 10 major major JJ cord-048471-7jszm1nd 50 11 products product NNS cord-048471-7jszm1nd 50 12 following follow VBG cord-048471-7jszm1nd 50 13 in in IN cord-048471-7jszm1nd 50 14 vitro vitro FW cord-048471-7jszm1nd 50 15 transcription transcription NN cord-048471-7jszm1nd 50 16 and and CC cord-048471-7jszm1nd 50 17 translation translation NN cord-048471-7jszm1nd 50 18 , , , cord-048471-7jszm1nd 50 19 representing represent VBG cord-048471-7jszm1nd 50 20 the the DT cord-048471-7jszm1nd 50 21 uncleaved uncleaved JJ cord-048471-7jszm1nd 50 22 3ABCD 3ABCD NNP cord-048471-7jszm1nd 50 23 , , , cord-048471-7jszm1nd 50 24 N n CD cord-048471-7jszm1nd 50 25 - - HYPH cord-048471-7jszm1nd 50 26 term term NN cord-048471-7jszm1nd 50 27 and and CC cord-048471-7jszm1nd 50 28 2C 2c NN cord-048471-7jszm1nd 50 29 proteins protein NNS cord-048471-7jszm1nd 50 30 . . . cord-048471-7jszm1nd 51 1 However however RB cord-048471-7jszm1nd 51 2 , , , cord-048471-7jszm1nd 51 3 initial initial JJ cord-048471-7jszm1nd 51 4 analysis analysis NN cord-048471-7jszm1nd 51 5 of of IN cord-048471-7jszm1nd 51 6 JV JV NNP cord-048471-7jszm1nd 51 7 polyprotein polyprotein NN cord-048471-7jszm1nd 51 8 processing processing NN cord-048471-7jszm1nd 51 9 indicated indicate VBD cord-048471-7jszm1nd 51 10 that that IN cord-048471-7jszm1nd 51 11 only only RB cord-048471-7jszm1nd 51 12 two two CD cord-048471-7jszm1nd 51 13 major major JJ cord-048471-7jszm1nd 51 14 proteins protein NNS cord-048471-7jszm1nd 51 15 are be VBP cord-048471-7jszm1nd 51 16 synthesised synthesise VBN cord-048471-7jszm1nd 51 17 initially initially RB cord-048471-7jszm1nd 51 18 which which WDT cord-048471-7jszm1nd 51 19 , , , cord-048471-7jszm1nd 51 20 based base VBN cord-048471-7jszm1nd 51 21 on on IN cord-048471-7jszm1nd 51 22 molecular molecular JJ cord-048471-7jszm1nd 51 23 weight weight NN cord-048471-7jszm1nd 51 24 predictions prediction NNS cord-048471-7jszm1nd 51 25 , , , cord-048471-7jszm1nd 51 26 are be VBP cord-048471-7jszm1nd 51 27 the the DT cord-048471-7jszm1nd 51 28 3ABCD 3abcd CD cord-048471-7jszm1nd 51 29 ( ( -LRB- cord-048471-7jszm1nd 51 30 110 110 CD cord-048471-7jszm1nd 51 31 kDa kDa NNPS cord-048471-7jszm1nd 51 32 ) ) -RRB- cord-048471-7jszm1nd 51 33 and and CC cord-048471-7jszm1nd 51 34 the the DT cord-048471-7jszm1nd 51 35 2C 2C NNP cord-048471-7jszm1nd 51 36 ( ( -LRB- cord-048471-7jszm1nd 51 37 39 39 CD cord-048471-7jszm1nd 51 38 kDa kDa NNPS cord-048471-7jszm1nd 51 39 ) ) -RRB- cord-048471-7jszm1nd 51 40 . . . cord-048471-7jszm1nd 52 1 The the DT cord-048471-7jszm1nd 52 2 lack lack NN cord-048471-7jszm1nd 52 3 of of IN cord-048471-7jszm1nd 52 4 an an DT cord-048471-7jszm1nd 52 5 N n CD cord-048471-7jszm1nd 52 6 - - HYPH cord-048471-7jszm1nd 52 7 terminal terminal NN cord-048471-7jszm1nd 52 8 protein protein NN cord-048471-7jszm1nd 52 9 encoded encode VBN cord-048471-7jszm1nd 52 10 by by IN cord-048471-7jszm1nd 52 11 the the DT cord-048471-7jszm1nd 52 12 JV JV NNP cord-048471-7jszm1nd 52 13 59GS 59gs CD cord-048471-7jszm1nd 52 14 , , , cord-048471-7jszm1nd 52 15 predicted predict VBD cord-048471-7jszm1nd 52 16 to to TO cord-048471-7jszm1nd 52 17 be be VB cord-048471-7jszm1nd 52 18 35.3 35.3 CD cord-048471-7jszm1nd 52 19 kDa kDa NNS cord-048471-7jszm1nd 52 20 , , , cord-048471-7jszm1nd 52 21 is be VBZ cord-048471-7jszm1nd 52 22 unique unique JJ cord-048471-7jszm1nd 52 23 among among IN cord-048471-7jszm1nd 52 24 the the DT cord-048471-7jszm1nd 52 25 noroviruses noroviruse NNS cord-048471-7jszm1nd 52 26 that that WDT cord-048471-7jszm1nd 52 27 have have VBP cord-048471-7jszm1nd 52 28 been be VBN cord-048471-7jszm1nd 52 29 studied study VBN cord-048471-7jszm1nd 52 30 in in IN cord-048471-7jszm1nd 52 31 this this DT cord-048471-7jszm1nd 52 32 way way NN cord-048471-7jszm1nd 52 33 . . . cord-048471-7jszm1nd 53 1 The the DT cord-048471-7jszm1nd 53 2 in in IN cord-048471-7jszm1nd 53 3 vitro vitro FW cord-048471-7jszm1nd 53 4 transcription transcription NN cord-048471-7jszm1nd 53 5 and and CC cord-048471-7jszm1nd 53 6 translation translation NN cord-048471-7jszm1nd 53 7 profile profile NN cord-048471-7jszm1nd 53 8 for for IN cord-048471-7jszm1nd 53 9 JV JV NNP cord-048471-7jszm1nd 53 10 was be VBD cord-048471-7jszm1nd 53 11 therefore therefore RB cord-048471-7jszm1nd 53 12 studied study VBN cord-048471-7jszm1nd 53 13 in in IN cord-048471-7jszm1nd 53 14 more more JJR cord-048471-7jszm1nd 53 15 detail detail NN cord-048471-7jszm1nd 53 16 . . . cord-048471-7jszm1nd 54 1 As as IN cord-048471-7jszm1nd 54 2 initial initial JJ cord-048471-7jszm1nd 54 3 experiments experiment NNS cord-048471-7jszm1nd 54 4 had have VBD cord-048471-7jszm1nd 54 5 analysed analyse VBN cord-048471-7jszm1nd 54 6 TNTH TNTH NNP cord-048471-7jszm1nd 54 7 reactions reaction NNS cord-048471-7jszm1nd 54 8 following follow VBG cord-048471-7jszm1nd 54 9 a a DT cord-048471-7jszm1nd 54 10 1 1 CD cord-048471-7jszm1nd 54 11 hr hr NN cord-048471-7jszm1nd 54 12 incubation incubation NN cord-048471-7jszm1nd 54 13 , , , cord-048471-7jszm1nd 54 14 reaction reaction NN cord-048471-7jszm1nd 54 15 aliquots aliquot NNS cord-048471-7jszm1nd 54 16 were be VBD cord-048471-7jszm1nd 54 17 harvested harvest VBN cord-048471-7jszm1nd 54 18 at at IN cord-048471-7jszm1nd 54 19 time time NN cord-048471-7jszm1nd 54 20 points point NNS cord-048471-7jszm1nd 54 21 before before RB cord-048471-7jszm1nd 54 22 and and CC cord-048471-7jszm1nd 54 23 after after IN cord-048471-7jszm1nd 54 24 the the DT cord-048471-7jszm1nd 54 25 recommended recommend VBN cord-048471-7jszm1nd 54 26 1 1 CD cord-048471-7jszm1nd 54 27 hr hr NN cord-048471-7jszm1nd 54 28 incubation incubation NN cord-048471-7jszm1nd 54 29 . . . cord-048471-7jszm1nd 55 1 The the DT cord-048471-7jszm1nd 55 2 results result NNS cord-048471-7jszm1nd 55 3 in in IN cord-048471-7jszm1nd 55 4 Figure figure NN cord-048471-7jszm1nd 55 5 1 1 CD cord-048471-7jszm1nd 55 6 show show VBP cord-048471-7jszm1nd 55 7 that that IN cord-048471-7jszm1nd 55 8 there there EX cord-048471-7jszm1nd 55 9 are be VBP cord-048471-7jszm1nd 55 10 no no DT cord-048471-7jszm1nd 55 11 major major JJ cord-048471-7jszm1nd 55 12 reaction reaction NN cord-048471-7jszm1nd 55 13 products product NNS cord-048471-7jszm1nd 55 14 synthesised synthesise VBN cord-048471-7jszm1nd 55 15 prior prior RB cord-048471-7jszm1nd 55 16 to to IN cord-048471-7jszm1nd 55 17 the the DT cord-048471-7jszm1nd 55 18 1 1 CD cord-048471-7jszm1nd 55 19 hr hr NN cord-048471-7jszm1nd 55 20 time time NN cord-048471-7jszm1nd 55 21 point point NN cord-048471-7jszm1nd 55 22 , , , cord-048471-7jszm1nd 55 23 at at IN cord-048471-7jszm1nd 55 24 which which WDT cord-048471-7jszm1nd 55 25 time time NN cord-048471-7jszm1nd 55 26 the the DT cord-048471-7jszm1nd 55 27 3ABCD 3abcd CD cord-048471-7jszm1nd 55 28 / / SYM cord-048471-7jszm1nd 55 29 p110 p110 NNP cord-048471-7jszm1nd 55 30 and and CC cord-048471-7jszm1nd 55 31 2C 2C NNP cord-048471-7jszm1nd 55 32 / / SYM cord-048471-7jszm1nd 55 33 p39 p39 NN cord-048471-7jszm1nd 55 34 proteins protein NNS cord-048471-7jszm1nd 55 35 are be VBP cord-048471-7jszm1nd 55 36 clearly clearly RB cord-048471-7jszm1nd 55 37 visible visible JJ cord-048471-7jszm1nd 55 38 . . . cord-048471-7jszm1nd 56 1 Extended extend VBN cord-048471-7jszm1nd 56 2 incubation incubation NN cord-048471-7jszm1nd 56 3 past past IN cord-048471-7jszm1nd 56 4 the the DT cord-048471-7jszm1nd 56 5 1 1 CD cord-048471-7jszm1nd 56 6 hr hr NN cord-048471-7jszm1nd 56 7 point point NN cord-048471-7jszm1nd 56 8 resulted result VBD cord-048471-7jszm1nd 56 9 in in IN cord-048471-7jszm1nd 56 10 further further JJ cord-048471-7jszm1nd 56 11 proteolytic proteolytic JJ cord-048471-7jszm1nd 56 12 cleavage cleavage NN cord-048471-7jszm1nd 56 13 of of IN cord-048471-7jszm1nd 56 14 p110 p110 NN cord-048471-7jszm1nd 56 15 that that WDT cord-048471-7jszm1nd 56 16 coincided coincide VBD cord-048471-7jszm1nd 56 17 with with IN cord-048471-7jszm1nd 56 18 the the DT cord-048471-7jszm1nd 56 19 appearance appearance NN cord-048471-7jszm1nd 56 20 of of IN cord-048471-7jszm1nd 56 21 proteins protein NNS cord-048471-7jszm1nd 56 22 of of IN cord-048471-7jszm1nd 56 23 the the DT cord-048471-7jszm1nd 56 24 following following JJ cord-048471-7jszm1nd 56 25 sizes size NNS cord-048471-7jszm1nd 56 26 : : : cord-048471-7jszm1nd 56 27 86 86 CD cord-048471-7jszm1nd 56 28 kDa kDa NNS cord-048471-7jszm1nd 56 29 , , , cord-048471-7jszm1nd 56 30 55 55 CD cord-048471-7jszm1nd 56 31 kDa kDa NNS cord-048471-7jszm1nd 56 32 , , , cord-048471-7jszm1nd 56 33 and and CC cord-048471-7jszm1nd 56 34 51 51 CD cord-048471-7jszm1nd 56 35 kDa kDa NNS cord-048471-7jszm1nd 56 36 . . . cord-048471-7jszm1nd 57 1 In in IN cord-048471-7jszm1nd 57 2 addition addition NN cord-048471-7jszm1nd 57 3 proteins protein NNS cord-048471-7jszm1nd 57 4 of of IN cord-048471-7jszm1nd 57 5 29 29 CD cord-048471-7jszm1nd 57 6 kDa kDa NNS cord-048471-7jszm1nd 57 7 , , , cord-048471-7jszm1nd 57 8 22 22 CD cord-048471-7jszm1nd 57 9 kDa kDa NNS cord-048471-7jszm1nd 57 10 and and CC cord-048471-7jszm1nd 57 11 20 20 CD cord-048471-7jszm1nd 57 12 kDa kDa NNS cord-048471-7jszm1nd 57 13 were be VBD cord-048471-7jszm1nd 57 14 also also RB cord-048471-7jszm1nd 57 15 visible visible JJ cord-048471-7jszm1nd 57 16 at at IN cord-048471-7jszm1nd 57 17 the the DT cord-048471-7jszm1nd 57 18 24 24 CD cord-048471-7jszm1nd 57 19 hr hr NN cord-048471-7jszm1nd 57 20 time time NN cord-048471-7jszm1nd 57 21 point point NN cord-048471-7jszm1nd 57 22 ( ( -LRB- cord-048471-7jszm1nd 57 23 Figure figure NN cord-048471-7jszm1nd 57 24 1 1 CD cord-048471-7jszm1nd 57 25 , , , cord-048471-7jszm1nd 57 26 lane lane NN cord-048471-7jszm1nd 57 27 7 7 CD cord-048471-7jszm1nd 57 28 ) ) -RRB- cord-048471-7jszm1nd 57 29 . . . cord-048471-7jszm1nd 58 1 The the DT cord-048471-7jszm1nd 58 2 only only JJ cord-048471-7jszm1nd 58 3 protein protein NN cord-048471-7jszm1nd 58 4 that that WDT cord-048471-7jszm1nd 58 5 was be VBD cord-048471-7jszm1nd 58 6 consistently consistently RB cord-048471-7jszm1nd 58 7 visible visible JJ cord-048471-7jszm1nd 58 8 following follow VBG cord-048471-7jszm1nd 58 9 the the DT cord-048471-7jszm1nd 58 10 1 1 CD cord-048471-7jszm1nd 58 11 hr hr NN cord-048471-7jszm1nd 58 12 time time NN cord-048471-7jszm1nd 58 13 point point NN cord-048471-7jszm1nd 58 14 was be VBD cord-048471-7jszm1nd 58 15 the the DT cord-048471-7jszm1nd 58 16 2C 2C NNP cord-048471-7jszm1nd 58 17 / / SYM cord-048471-7jszm1nd 58 18 p39 p39 NN cord-048471-7jszm1nd 58 19 protein protein NN cord-048471-7jszm1nd 58 20 . . . cord-048471-7jszm1nd 59 1 Despite despite IN cord-048471-7jszm1nd 59 2 prolonged prolonged JJ cord-048471-7jszm1nd 59 3 incubation incubation NN cord-048471-7jszm1nd 59 4 there there EX cord-048471-7jszm1nd 59 5 was be VBD cord-048471-7jszm1nd 59 6 no no DT cord-048471-7jszm1nd 59 7 indication indication NN cord-048471-7jszm1nd 59 8 that that IN cord-048471-7jszm1nd 59 9 the the DT cord-048471-7jszm1nd 59 10 N n CD cord-048471-7jszm1nd 59 11 - - HYPH cord-048471-7jszm1nd 59 12 terminal terminal NN cord-048471-7jszm1nd 59 13 / / SYM cord-048471-7jszm1nd 59 14 p35 p35 CD cord-048471-7jszm1nd 59 15 protein protein NN cord-048471-7jszm1nd 59 16 was be VBD cord-048471-7jszm1nd 59 17 synthesised synthesise VBN cord-048471-7jszm1nd 59 18 . . . cord-048471-7jszm1nd 60 1 A a DT cord-048471-7jszm1nd 60 2 comprehensive comprehensive JJ cord-048471-7jszm1nd 60 3 study study NN cord-048471-7jszm1nd 60 4 of of IN cord-048471-7jszm1nd 60 5 polyprotein polyprotein JJ cord-048471-7jszm1nd 60 6 processing processing NN cord-048471-7jszm1nd 60 7 within within IN cord-048471-7jszm1nd 60 8 the the DT cord-048471-7jszm1nd 60 9 murine murine JJ cord-048471-7jszm1nd 60 10 norovirus norovirus NN cord-048471-7jszm1nd 60 11 ( ( -LRB- cord-048471-7jszm1nd 60 12 MNV MNV NNP cord-048471-7jszm1nd 60 13 ) ) -RRB- cord-048471-7jszm1nd 60 14 suggests suggest VBZ cord-048471-7jszm1nd 60 15 likely likely JJ cord-048471-7jszm1nd 60 16 identities identity NNS cord-048471-7jszm1nd 60 17 for for IN cord-048471-7jszm1nd 60 18 the the DT cord-048471-7jszm1nd 60 19 equivalent equivalent JJ cord-048471-7jszm1nd 60 20 proteins protein NNS cord-048471-7jszm1nd 60 21 in in IN cord-048471-7jszm1nd 60 22 the the DT cord-048471-7jszm1nd 60 23 similar similar JJ cord-048471-7jszm1nd 60 24 profile profile NN cord-048471-7jszm1nd 60 25 for for IN cord-048471-7jszm1nd 60 26 JV JV NNP cord-048471-7jszm1nd 60 27 [ [ -LRB- cord-048471-7jszm1nd 60 28 12 12 CD cord-048471-7jszm1nd 60 29 ] ] -RRB- cord-048471-7jszm1nd 60 30 . . . cord-048471-7jszm1nd 61 1 Using use VBG cord-048471-7jszm1nd 61 2 region region NN cord-048471-7jszm1nd 61 3 specific specific JJ cord-048471-7jszm1nd 61 4 antisera antisera NN cord-048471-7jszm1nd 61 5 the the DT cord-048471-7jszm1nd 61 6 authors author NNS cord-048471-7jszm1nd 61 7 were be VBD cord-048471-7jszm1nd 61 8 able able JJ cord-048471-7jszm1nd 61 9 to to TO cord-048471-7jszm1nd 61 10 identify identify VB cord-048471-7jszm1nd 61 11 p110 p110 NNS cord-048471-7jszm1nd 61 12 as as IN cord-048471-7jszm1nd 61 13 the the DT cord-048471-7jszm1nd 61 14 3ABCD 3abcd CD cord-048471-7jszm1nd 61 15 uncleaved uncleaved JJ cord-048471-7jszm1nd 61 16 precursor precursor NN cord-048471-7jszm1nd 61 17 , , , cord-048471-7jszm1nd 61 18 p90 p90 NN cord-048471-7jszm1nd 61 19 as as IN cord-048471-7jszm1nd 61 20 the the DT cord-048471-7jszm1nd 61 21 3BCD 3BCD NNP cord-048471-7jszm1nd 61 22 , , , cord-048471-7jszm1nd 61 23 p57.5 p57.5 XX cord-048471-7jszm1nd 61 24 as as IN cord-048471-7jszm1nd 61 25 the the DT cord-048471-7jszm1nd 61 26 3D 3d JJ cord-048471-7jszm1nd 61 27 - - HYPH cord-048471-7jszm1nd 61 28 like like JJ cord-048471-7jszm1nd 61 29 polymerase polymerase NN cord-048471-7jszm1nd 61 30 , , , cord-048471-7jszm1nd 61 31 p52 p52 NN cord-048471-7jszm1nd 61 32 as as IN cord-048471-7jszm1nd 61 33 a a DT cord-048471-7jszm1nd 61 34 3ABC 3abc NN cord-048471-7jszm1nd 61 35 precursor precursor NN cord-048471-7jszm1nd 61 36 and and CC cord-048471-7jszm1nd 61 37 p40 p40 NN cord-048471-7jszm1nd 61 38 as as IN cord-048471-7jszm1nd 61 39 the the DT cord-048471-7jszm1nd 61 40 2Clike 2clike JJ cord-048471-7jszm1nd 61 41 NTPase NTPase NNP cord-048471-7jszm1nd 61 42 , , , cord-048471-7jszm1nd 61 43 which which WDT cord-048471-7jszm1nd 61 44 was be VBD cord-048471-7jszm1nd 61 45 determined determine VBN cord-048471-7jszm1nd 61 46 by by IN cord-048471-7jszm1nd 61 47 mutagenesis mutagenesis NN cord-048471-7jszm1nd 61 48 and and CC cord-048471-7jszm1nd 61 49 microsequencing microsequence VBG cord-048471-7jszm1nd 61 50 experiments experiment NNS cord-048471-7jszm1nd 61 51 . . . cord-048471-7jszm1nd 62 1 The the DT cord-048471-7jszm1nd 62 2 19 19 CD cord-048471-7jszm1nd 62 3 kDa kDa NNP cord-048471-7jszm1nd 62 4 protein protein NN cord-048471-7jszm1nd 62 5 was be VBD cord-048471-7jszm1nd 62 6 identified identify VBN cord-048471-7jszm1nd 62 7 as as IN cord-048471-7jszm1nd 62 8 the the DT cord-048471-7jszm1nd 62 9 3C 3c NN cord-048471-7jszm1nd 62 10 - - HYPH cord-048471-7jszm1nd 62 11 like like JJ cord-048471-7jszm1nd 62 12 protease protease NN cord-048471-7jszm1nd 62 13 . . . cord-048471-7jszm1nd 63 1 The the DT cord-048471-7jszm1nd 63 2 antisera antisera NN cord-048471-7jszm1nd 63 3 used use VBD cord-048471-7jszm1nd 63 4 to to TO cord-048471-7jszm1nd 63 5 detect detect VB cord-048471-7jszm1nd 63 6 the the DT cord-048471-7jszm1nd 63 7 MNV MNV NNP cord-048471-7jszm1nd 63 8 Nterm Nterm NNP cord-048471-7jszm1nd 63 9 protein protein NN cord-048471-7jszm1nd 63 10 recognised recognise VBD cord-048471-7jszm1nd 63 11 3 3 CD cord-048471-7jszm1nd 63 12 products product NNS cord-048471-7jszm1nd 63 13 ; ; : cord-048471-7jszm1nd 63 14 one one CD cord-048471-7jszm1nd 63 15 was be VBD cord-048471-7jszm1nd 63 16 the the DT cord-048471-7jszm1nd 63 17 predicted predict VBN cord-048471-7jszm1nd 63 18 molecular molecular JJ cord-048471-7jszm1nd 63 19 weight weight NN cord-048471-7jszm1nd 63 20 at at IN cord-048471-7jszm1nd 63 21 39 39 CD cord-048471-7jszm1nd 63 22 kDa kDa NNS cord-048471-7jszm1nd 63 23 and and CC cord-048471-7jszm1nd 63 24 the the DT cord-048471-7jszm1nd 63 25 other other JJ cord-048471-7jszm1nd 63 26 two two CD cord-048471-7jszm1nd 63 27 bands band NNS cord-048471-7jszm1nd 63 28 migrated migrate VBD cord-048471-7jszm1nd 63 29 as as IN cord-048471-7jszm1nd 63 30 a a DT cord-048471-7jszm1nd 63 31 45 45 CD cord-048471-7jszm1nd 63 32 kDa kDa NNS cord-048471-7jszm1nd 63 33 doublet doublet NN cord-048471-7jszm1nd 63 34 . . . cord-048471-7jszm1nd 64 1 The the DT cord-048471-7jszm1nd 64 2 59GS 59gs CD cord-048471-7jszm1nd 64 3 region region NN cord-048471-7jszm1nd 64 4 of of IN cord-048471-7jszm1nd 64 5 JV JV NNP cord-048471-7jszm1nd 64 6 is be VBZ cord-048471-7jszm1nd 64 7 highly highly RB cord-048471-7jszm1nd 64 8 divergent divergent JJ cord-048471-7jszm1nd 64 9 compared compare VBN cord-048471-7jszm1nd 64 10 to to IN cord-048471-7jszm1nd 64 11 other other JJ cord-048471-7jszm1nd 64 12 noroviruses noroviruse NNS cord-048471-7jszm1nd 64 13 , , , cord-048471-7jszm1nd 64 14 mainly mainly RB cord-048471-7jszm1nd 64 15 due due IN cord-048471-7jszm1nd 64 16 to to IN cord-048471-7jszm1nd 64 17 the the DT cord-048471-7jszm1nd 64 18 relatively relatively RB cord-048471-7jszm1nd 64 19 high high JJ cord-048471-7jszm1nd 64 20 cytosine cytosine NN cord-048471-7jszm1nd 64 21 content content NN cord-048471-7jszm1nd 64 22 ( ( -LRB- cord-048471-7jszm1nd 64 23 32 32 CD cord-048471-7jszm1nd 64 24 % % NN cord-048471-7jszm1nd 64 25 ) ) -RRB- cord-048471-7jszm1nd 64 26 , , , cord-048471-7jszm1nd 64 27 which which WDT cord-048471-7jszm1nd 64 28 contributes contribute VBZ cord-048471-7jszm1nd 64 29 to to IN cord-048471-7jszm1nd 64 30 an an DT cord-048471-7jszm1nd 64 31 overall overall JJ cord-048471-7jszm1nd 64 32 G g NN cord-048471-7jszm1nd 64 33 / / SYM cord-048471-7jszm1nd 64 34 C c NN cord-048471-7jszm1nd 64 35 content content NN cord-048471-7jszm1nd 64 36 of of IN cord-048471-7jszm1nd 64 37 58 58 CD cord-048471-7jszm1nd 64 38 % % NN cord-048471-7jszm1nd 64 39 . . . cord-048471-7jszm1nd 65 1 There there EX cord-048471-7jszm1nd 65 2 are be VBP cord-048471-7jszm1nd 65 3 many many JJ cord-048471-7jszm1nd 65 4 polypyrimidine polypyrimidine JJ cord-048471-7jszm1nd 65 5 tracts tract NNS cord-048471-7jszm1nd 65 6 within within IN cord-048471-7jszm1nd 65 7 the the DT cord-048471-7jszm1nd 65 8 sequence sequence NN cord-048471-7jszm1nd 65 9 , , , cord-048471-7jszm1nd 65 10 potentially potentially RB cord-048471-7jszm1nd 65 11 yielding yield VBG cord-048471-7jszm1nd 65 12 a a DT cord-048471-7jszm1nd 65 13 relatively relatively RB cord-048471-7jszm1nd 65 14 high high JJ cord-048471-7jszm1nd 65 15 degree degree NN cord-048471-7jszm1nd 65 16 of of IN cord-048471-7jszm1nd 65 17 RNA RNA NNP cord-048471-7jszm1nd 65 18 secondary secondary JJ cord-048471-7jszm1nd 65 19 structure structure NN cord-048471-7jszm1nd 65 20 . . . cord-048471-7jszm1nd 66 1 Previous previous JJ cord-048471-7jszm1nd 66 2 studies study NNS cord-048471-7jszm1nd 66 3 have have VBP cord-048471-7jszm1nd 66 4 described describe VBN cord-048471-7jszm1nd 66 5 potential potential JJ cord-048471-7jszm1nd 66 6 secondary secondary JJ cord-048471-7jszm1nd 66 7 RNA RNA NNP cord-048471-7jszm1nd 66 8 structure structure NN cord-048471-7jszm1nd 66 9 and and CC cord-048471-7jszm1nd 66 10 interaction interaction NN cord-048471-7jszm1nd 66 11 with with IN cord-048471-7jszm1nd 66 12 proteins protein NNS cord-048471-7jszm1nd 66 13 involved involve VBN cord-048471-7jszm1nd 66 14 with with IN cord-048471-7jszm1nd 66 15 IRESmediated iresmediate VBN cord-048471-7jszm1nd 66 16 translation translation NN cord-048471-7jszm1nd 66 17 within within IN cord-048471-7jszm1nd 66 18 the the DT cord-048471-7jszm1nd 66 19 59 59 CD cord-048471-7jszm1nd 66 20 genomic genomic JJ cord-048471-7jszm1nd 66 21 region region NN cord-048471-7jszm1nd 66 22 of of IN cord-048471-7jszm1nd 66 23 Norwalk Norwalk NNP cord-048471-7jszm1nd 66 24 virus virus NN cord-048471-7jszm1nd 66 25 [ [ -LRB- cord-048471-7jszm1nd 66 26 18 18 CD cord-048471-7jszm1nd 66 27 , , , cord-048471-7jszm1nd 66 28 24 24 CD cord-048471-7jszm1nd 66 29 ] ] -RRB- cord-048471-7jszm1nd 66 30 . . . cord-048471-7jszm1nd 67 1 It -PRON- PRP cord-048471-7jszm1nd 67 2 was be VBD cord-048471-7jszm1nd 67 3 of of IN cord-048471-7jszm1nd 67 4 interest interest NN cord-048471-7jszm1nd 67 5 therefore therefore RB cord-048471-7jszm1nd 67 6 , , , cord-048471-7jszm1nd 67 7 based base VBN cord-048471-7jszm1nd 67 8 on on IN cord-048471-7jszm1nd 67 9 these these DT cord-048471-7jszm1nd 67 10 findings finding NNS cord-048471-7jszm1nd 67 11 , , , cord-048471-7jszm1nd 67 12 to to TO cord-048471-7jszm1nd 67 13 ascertain ascertain VB cord-048471-7jszm1nd 67 14 whether whether IN cord-048471-7jszm1nd 67 15 or or CC cord-048471-7jszm1nd 67 16 not not RB cord-048471-7jszm1nd 67 17 the the DT cord-048471-7jszm1nd 67 18 59GS 59gs CD cord-048471-7jszm1nd 67 19 of of IN cord-048471-7jszm1nd 67 20 JV JV NNP cord-048471-7jszm1nd 67 21 possessed possess VBD cord-048471-7jszm1nd 67 22 IRES IRES NNP cord-048471-7jszm1nd 67 23 - - HYPH cord-048471-7jszm1nd 67 24 like like JJ cord-048471-7jszm1nd 67 25 properties property NNS cord-048471-7jszm1nd 67 26 within within IN cord-048471-7jszm1nd 67 27 the the DT cord-048471-7jszm1nd 67 28 context context NN cord-048471-7jszm1nd 67 29 of of IN cord-048471-7jszm1nd 67 30 a a DT cord-048471-7jszm1nd 67 31 ' ' `` cord-048471-7jszm1nd 67 32 Bi Bi NNP cord-048471-7jszm1nd 67 33 - - HYPH cord-048471-7jszm1nd 67 34 cistronic cistronic NNP cord-048471-7jszm1nd 67 35 ' ' POS cord-048471-7jszm1nd 67 36 expression expression NN cord-048471-7jszm1nd 67 37 system system NN cord-048471-7jszm1nd 67 38 , , , cord-048471-7jszm1nd 67 39 independently independently RB cord-048471-7jszm1nd 67 40 of of IN cord-048471-7jszm1nd 67 41 other other JJ cord-048471-7jszm1nd 67 42 viral viral JJ cord-048471-7jszm1nd 67 43 proteins protein NNS cord-048471-7jszm1nd 67 44 , , , cord-048471-7jszm1nd 67 45 including include VBG cord-048471-7jszm1nd 67 46 the the DT cord-048471-7jszm1nd 67 47 VPg VPg NNS cord-048471-7jszm1nd 67 48 which which WDT cord-048471-7jszm1nd 67 49 , , , cord-048471-7jszm1nd 67 50 in in IN cord-048471-7jszm1nd 67 51 other other JJ cord-048471-7jszm1nd 67 52 caliciviruses caliciviruse NNS cord-048471-7jszm1nd 67 53 , , , cord-048471-7jszm1nd 67 54 has have VBZ cord-048471-7jszm1nd 67 55 been be VBN cord-048471-7jszm1nd 67 56 shown show VBN cord-048471-7jszm1nd 67 57 to to TO cord-048471-7jszm1nd 67 58 be be VB cord-048471-7jszm1nd 67 59 associated associate VBN cord-048471-7jszm1nd 67 60 with with IN cord-048471-7jszm1nd 67 61 translation translation NN cord-048471-7jszm1nd 67 62 initiation initiation NN cord-048471-7jszm1nd 67 63 factors factor NNS cord-048471-7jszm1nd 67 64 [ [ -LRB- cord-048471-7jszm1nd 67 65 25 25 CD cord-048471-7jszm1nd 67 66 , , , cord-048471-7jszm1nd 67 67 26 26 CD cord-048471-7jszm1nd 67 68 ] ] -RRB- cord-048471-7jszm1nd 67 69 . . . cord-048471-7jszm1nd 68 1 Traditionally traditionally RB cord-048471-7jszm1nd 68 2 the the DT cord-048471-7jszm1nd 68 3 bi bi JJ cord-048471-7jszm1nd 68 4 - - HYPH cord-048471-7jszm1nd 68 5 cistronic cistronic JJ cord-048471-7jszm1nd 68 6 vector vector NN cord-048471-7jszm1nd 68 7 system system NN cord-048471-7jszm1nd 68 8 has have VBZ cord-048471-7jszm1nd 68 9 been be VBN cord-048471-7jszm1nd 68 10 used use VBN cord-048471-7jszm1nd 68 11 to to TO cord-048471-7jszm1nd 68 12 define define VB cord-048471-7jszm1nd 68 13 potential potential JJ cord-048471-7jszm1nd 68 14 IRES IRES NNP cord-048471-7jszm1nd 68 15 - - HYPH cord-048471-7jszm1nd 68 16 like like JJ cord-048471-7jszm1nd 68 17 sequences sequence NNS cord-048471-7jszm1nd 68 18 from from IN cord-048471-7jszm1nd 68 19 a a DT cord-048471-7jszm1nd 68 20 variety variety NN cord-048471-7jszm1nd 68 21 of of IN cord-048471-7jszm1nd 68 22 viral viral JJ cord-048471-7jszm1nd 68 23 and and CC cord-048471-7jszm1nd 68 24 cellular cellular JJ cord-048471-7jszm1nd 68 25 mRNAs mrna NNS cord-048471-7jszm1nd 68 26 , , , cord-048471-7jszm1nd 68 27 and and CC cord-048471-7jszm1nd 68 28 is be VBZ cord-048471-7jszm1nd 68 29 recognized recognize VBN cord-048471-7jszm1nd 68 30 as as IN cord-048471-7jszm1nd 68 31 being be VBG cord-048471-7jszm1nd 68 32 the the DT cord-048471-7jszm1nd 68 33 standard standard JJ cord-048471-7jszm1nd 68 34 test test NN cord-048471-7jszm1nd 68 35 for for IN cord-048471-7jszm1nd 68 36 this this DT cord-048471-7jszm1nd 68 37 function function NN cord-048471-7jszm1nd 68 38 [ [ -LRB- cord-048471-7jszm1nd 68 39 27 27 CD cord-048471-7jszm1nd 68 40 ] ] -RRB- cord-048471-7jszm1nd 68 41 . . . cord-048471-7jszm1nd 69 1 A a DT cord-048471-7jszm1nd 69 2 bi bi JJ cord-048471-7jszm1nd 69 3 - - HYPH cord-048471-7jszm1nd 69 4 cistronic cistronic JJ cord-048471-7jszm1nd 69 5 vector vector NN cord-048471-7jszm1nd 69 6 is be VBZ cord-048471-7jszm1nd 69 7 comprised comprise VBN cord-048471-7jszm1nd 69 8 of of IN cord-048471-7jszm1nd 69 9 a a DT cord-048471-7jszm1nd 69 10 59 59 CD cord-048471-7jszm1nd 69 11 and and CC cord-048471-7jszm1nd 69 12 39 39 CD cord-048471-7jszm1nd 69 13 cistron cistron NN cord-048471-7jszm1nd 69 14 ; ; : cord-048471-7jszm1nd 69 15 translation translation NN cord-048471-7jszm1nd 69 16 of of IN cord-048471-7jszm1nd 69 17 the the DT cord-048471-7jszm1nd 69 18 59 59 CD cord-048471-7jszm1nd 69 19 cistron cistron NN cord-048471-7jszm1nd 69 20 being be VBG cord-048471-7jszm1nd 69 21 cap cap NN cord-048471-7jszm1nd 69 22 - - HYPH cord-048471-7jszm1nd 69 23 dependent dependent JJ cord-048471-7jszm1nd 69 24 and and CC cord-048471-7jszm1nd 69 25 translation translation NN cord-048471-7jszm1nd 69 26 of of IN cord-048471-7jszm1nd 69 27 the the DT cord-048471-7jszm1nd 69 28 39 39 CD cord-048471-7jszm1nd 69 29 cistron cistron NN cord-048471-7jszm1nd 69 30 regulated regulate VBN cord-048471-7jszm1nd 69 31 by by IN cord-048471-7jszm1nd 69 32 the the DT cord-048471-7jszm1nd 69 33 putative putative JJ cord-048471-7jszm1nd 69 34 IRES IRES NNP cord-048471-7jszm1nd 69 35 - - HYPH cord-048471-7jszm1nd 69 36 like like JJ cord-048471-7jszm1nd 69 37 sequence sequence NN cord-048471-7jszm1nd 69 38 . . . cord-048471-7jszm1nd 70 1 Thus thus RB cord-048471-7jszm1nd 70 2 , , , cord-048471-7jszm1nd 70 3 if if IN cord-048471-7jszm1nd 70 4 the the DT cord-048471-7jszm1nd 70 5 39 39 CD cord-048471-7jszm1nd 70 6 cistron cistron NN cord-048471-7jszm1nd 70 7 is be VBZ cord-048471-7jszm1nd 70 8 translated translate VBN cord-048471-7jszm1nd 70 9 in in IN cord-048471-7jszm1nd 70 10 addition addition NN cord-048471-7jszm1nd 70 11 to to IN cord-048471-7jszm1nd 70 12 the the DT cord-048471-7jszm1nd 70 13 59 59 CD cord-048471-7jszm1nd 70 14 cistron cistron NN cord-048471-7jszm1nd 70 15 then then RB cord-048471-7jszm1nd 70 16 the the DT cord-048471-7jszm1nd 70 17 sequence sequence NN cord-048471-7jszm1nd 70 18 of of IN cord-048471-7jszm1nd 70 19 interest interest NN cord-048471-7jszm1nd 70 20 is be VBZ cord-048471-7jszm1nd 70 21 said say VBN cord-048471-7jszm1nd 70 22 to to TO cord-048471-7jszm1nd 70 23 have have VB cord-048471-7jszm1nd 70 24 IRES ire VBN cord-048471-7jszm1nd 70 25 - - HYPH cord-048471-7jszm1nd 70 26 like like JJ cord-048471-7jszm1nd 70 27 properties property NNS cord-048471-7jszm1nd 70 28 , , , cord-048471-7jszm1nd 70 29 as as IN cord-048471-7jszm1nd 70 30 translation translation NN cord-048471-7jszm1nd 70 31 is be VBZ cord-048471-7jszm1nd 70 32 initiating initiate VBG cord-048471-7jszm1nd 70 33 internally internally RB cord-048471-7jszm1nd 70 34 . . . cord-048471-7jszm1nd 71 1 To to TO cord-048471-7jszm1nd 71 2 test test VB cord-048471-7jszm1nd 71 3 for for IN cord-048471-7jszm1nd 71 4 IRES IRES NNP cord-048471-7jszm1nd 71 5 - - HYPH cord-048471-7jszm1nd 71 6 like like JJ cord-048471-7jszm1nd 71 7 function function NN cord-048471-7jszm1nd 71 8 in in IN cord-048471-7jszm1nd 71 9 JV JV NNP cord-048471-7jszm1nd 71 10 , , , cord-048471-7jszm1nd 71 11 bi bi NNP cord-048471-7jszm1nd 71 12 - - HYPH cord-048471-7jszm1nd 71 13 cistronic cistronic JJ cord-048471-7jszm1nd 71 14 constructs construct NNS cord-048471-7jszm1nd 71 15 were be VBD cord-048471-7jszm1nd 71 16 made make VBN cord-048471-7jszm1nd 71 17 with with IN cord-048471-7jszm1nd 71 18 a a DT cord-048471-7jszm1nd 71 19 cap cap NN cord-048471-7jszm1nd 71 20 dependent dependent JJ cord-048471-7jszm1nd 71 21 59 59 CD cord-048471-7jszm1nd 71 22 EGFP EGFP NNP cord-048471-7jszm1nd 71 23 cistron cistron NN cord-048471-7jszm1nd 71 24 and and CC cord-048471-7jszm1nd 71 25 a a DT cord-048471-7jszm1nd 71 26 39 39 CD cord-048471-7jszm1nd 71 27 lacZ lacZ NNP cord-048471-7jszm1nd 71 28 cistron cistron NN cord-048471-7jszm1nd 71 29 under under IN cord-048471-7jszm1nd 71 30 the the DT cord-048471-7jszm1nd 71 31 translational translational JJ cord-048471-7jszm1nd 71 32 control control NN cord-048471-7jszm1nd 71 33 of of IN cord-048471-7jszm1nd 71 34 either either CC cord-048471-7jszm1nd 71 35 the the DT cord-048471-7jszm1nd 71 36 JV JV NNP cord-048471-7jszm1nd 71 37 59GS 59gs CD cord-048471-7jszm1nd 71 38 ( ( -LRB- cord-048471-7jszm1nd 71 39 pEGFP pEGFP NNP cord-048471-7jszm1nd 71 40 - - HYPH cord-048471-7jszm1nd 71 41 C1/ C1/ NNP cord-048471-7jszm1nd 71 42 JV59GS JV59GS NNP cord-048471-7jszm1nd 71 43 / / SYM cord-048471-7jszm1nd 71 44 lacZ lacZ NNP cord-048471-7jszm1nd 71 45 ) ) -RRB- cord-048471-7jszm1nd 71 46 or or CC cord-048471-7jszm1nd 71 47 an an DT cord-048471-7jszm1nd 71 48 authentic authentic JJ cord-048471-7jszm1nd 71 49 EMCV EMCV NNP cord-048471-7jszm1nd 71 50 IRES IRES NNP cord-048471-7jszm1nd 71 51 ( ( -LRB- cord-048471-7jszm1nd 71 52 pEGFP pEGFP NNP cord-048471-7jszm1nd 71 53 - - HYPH cord-048471-7jszm1nd 71 54 C1 C1 NNP cord-048471-7jszm1nd 71 55 / / SYM cord-048471-7jszm1nd 71 56 IRES/ IRES/ NNP cord-048471-7jszm1nd 71 57 lacZ lacz POS cord-048471-7jszm1nd 71 58 ) ) -RRB- cord-048471-7jszm1nd 71 59 . . . cord-048471-7jszm1nd 72 1 CRFK CRFK NNP cord-048471-7jszm1nd 72 2 cells cell NNS cord-048471-7jszm1nd 72 3 were be VBD cord-048471-7jszm1nd 72 4 transfected transfecte VBN cord-048471-7jszm1nd 72 5 with with IN cord-048471-7jszm1nd 72 6 the the DT cord-048471-7jszm1nd 72 7 bi bi JJ cord-048471-7jszm1nd 72 8 - - HYPH cord-048471-7jszm1nd 72 9 cistronic cistronic JJ cord-048471-7jszm1nd 72 10 constructs construct NNS cord-048471-7jszm1nd 72 11 and and CC cord-048471-7jszm1nd 72 12 , , , cord-048471-7jszm1nd 72 13 following follow VBG cord-048471-7jszm1nd 72 14 incubation incubation NN cord-048471-7jszm1nd 72 15 , , , cord-048471-7jszm1nd 72 16 were be VBD cord-048471-7jszm1nd 72 17 assayed assay VBN cord-048471-7jszm1nd 72 18 for for IN cord-048471-7jszm1nd 72 19 EGFP EGFP NNP cord-048471-7jszm1nd 72 20 and and CC cord-048471-7jszm1nd 72 21 lacZ lacZ NNP cord-048471-7jszm1nd 72 22 expression expression NN cord-048471-7jszm1nd 72 23 . . . cord-048471-7jszm1nd 73 1 Both both DT cord-048471-7jszm1nd 73 2 constructs construct NNS cord-048471-7jszm1nd 73 3 were be VBD cord-048471-7jszm1nd 73 4 able able JJ cord-048471-7jszm1nd 73 5 to to TO cord-048471-7jszm1nd 73 6 direct direct VB cord-048471-7jszm1nd 73 7 translation translation NN cord-048471-7jszm1nd 73 8 of of IN cord-048471-7jszm1nd 73 9 the the DT cord-048471-7jszm1nd 73 10 EGFP EGFP NNP cord-048471-7jszm1nd 73 11 cistron cistron NN cord-048471-7jszm1nd 73 12 effectively effectively RB cord-048471-7jszm1nd 73 13 as as IN cord-048471-7jszm1nd 73 14 expected expect VBN cord-048471-7jszm1nd 73 15 ( ( -LRB- cord-048471-7jszm1nd 73 16 Figure figure NN cord-048471-7jszm1nd 73 17 2a 2a CD cord-048471-7jszm1nd 73 18 and and CC cord-048471-7jszm1nd 73 19 Figure2d Figure2d NNP cord-048471-7jszm1nd 73 20 ) ) -RRB- cord-048471-7jszm1nd 73 21 . . . cord-048471-7jszm1nd 74 1 The the DT cord-048471-7jszm1nd 74 2 use use NN cord-048471-7jszm1nd 74 3 of of IN cord-048471-7jszm1nd 74 4 an an DT cord-048471-7jszm1nd 74 5 authentic authentic JJ cord-048471-7jszm1nd 74 6 EMCV EMCV NNP cord-048471-7jszm1nd 74 7 IRES IRES NNP cord-048471-7jszm1nd 74 8 to to TO cord-048471-7jszm1nd 74 9 direct direct JJ cord-048471-7jszm1nd 74 10 translation translation NN cord-048471-7jszm1nd 74 11 of of IN cord-048471-7jszm1nd 74 12 the the DT cord-048471-7jszm1nd 74 13 lacZ lacZ NNP cord-048471-7jszm1nd 74 14 cistron cistron NN cord-048471-7jszm1nd 74 15 was be VBD cord-048471-7jszm1nd 74 16 also also RB cord-048471-7jszm1nd 74 17 effective effective JJ cord-048471-7jszm1nd 74 18 ( ( -LRB- cord-048471-7jszm1nd 74 19 Figure figure NN cord-048471-7jszm1nd 74 20 2e 2e CD cord-048471-7jszm1nd 74 21 ) ) -RRB- cord-048471-7jszm1nd 74 22 , , , cord-048471-7jszm1nd 74 23 with with IN cord-048471-7jszm1nd 74 24 levels level NNS cord-048471-7jszm1nd 74 25 of of IN cord-048471-7jszm1nd 74 26 b b NN cord-048471-7jszm1nd 74 27 - - HYPH cord-048471-7jszm1nd 74 28 galactosidase galactosidase NN cord-048471-7jszm1nd 74 29 activity activity NN cord-048471-7jszm1nd 74 30 comparable comparable JJ cord-048471-7jszm1nd 74 31 to to IN cord-048471-7jszm1nd 74 32 those those DT cord-048471-7jszm1nd 74 33 of of IN cord-048471-7jszm1nd 74 34 the the DT cord-048471-7jszm1nd 74 35 b b NN cord-048471-7jszm1nd 74 36 - - HYPH cord-048471-7jszm1nd 74 37 galactosidase galactosidase NN cord-048471-7jszm1nd 74 38 reporter reporter NN cord-048471-7jszm1nd 74 39 ( ( -LRB- cord-048471-7jszm1nd 74 40 Figure Figure NNP cord-048471-7jszm1nd 74 41 2f 2f NNP cord-048471-7jszm1nd 74 42 ) ) -RRB- cord-048471-7jszm1nd 74 43 . . . cord-048471-7jszm1nd 75 1 However however RB cord-048471-7jszm1nd 75 2 , , , cord-048471-7jszm1nd 75 3 no no DT cord-048471-7jszm1nd 75 4 b b NN cord-048471-7jszm1nd 75 5 - - HYPH cord-048471-7jszm1nd 75 6 galactosidase galactosidase NN cord-048471-7jszm1nd 75 7 activity activity NN cord-048471-7jszm1nd 75 8 was be VBD cord-048471-7jszm1nd 75 9 detected detect VBN cord-048471-7jszm1nd 75 10 from from IN cord-048471-7jszm1nd 75 11 cells cell NNS cord-048471-7jszm1nd 75 12 transfected transfecte VBN cord-048471-7jszm1nd 75 13 with with IN cord-048471-7jszm1nd 75 14 the the DT cord-048471-7jszm1nd 75 15 pEGFP pEGFP NNP cord-048471-7jszm1nd 75 16 - - HYPH cord-048471-7jszm1nd 75 17 C1 C1 NNP cord-048471-7jszm1nd 75 18 / / SYM cord-048471-7jszm1nd 75 19 JV59GS JV59GS NNP cord-048471-7jszm1nd 75 20 / / SYM cord-048471-7jszm1nd 75 21 lacZ lacZ -LRB- cord-048471-7jszm1nd 75 22 construct construct VB cord-048471-7jszm1nd 75 23 ( ( -LRB- cord-048471-7jszm1nd 75 24 Figure figure NN cord-048471-7jszm1nd 75 25 2b 2b CD cord-048471-7jszm1nd 75 26 ) ) -RRB- cord-048471-7jszm1nd 75 27 , , , cord-048471-7jszm1nd 75 28 demonstrating demonstrate VBG cord-048471-7jszm1nd 75 29 that that IN cord-048471-7jszm1nd 75 30 the the DT cord-048471-7jszm1nd 75 31 JV JV NNP cord-048471-7jszm1nd 75 32 59GS 59gs CD cord-048471-7jszm1nd 75 33 was be VBD cord-048471-7jszm1nd 75 34 unable unable JJ cord-048471-7jszm1nd 75 35 to to TO cord-048471-7jszm1nd 75 36 initiate initiate VB cord-048471-7jszm1nd 75 37 translation translation NN cord-048471-7jszm1nd 75 38 , , , cord-048471-7jszm1nd 75 39 and and CC cord-048471-7jszm1nd 75 40 therefore therefore RB cord-048471-7jszm1nd 75 41 , , , cord-048471-7jszm1nd 75 42 in in IN cord-048471-7jszm1nd 75 43 this this DT cord-048471-7jszm1nd 75 44 context context NN cord-048471-7jszm1nd 75 45 , , , cord-048471-7jszm1nd 75 46 did do VBD cord-048471-7jszm1nd 75 47 not not RB cord-048471-7jszm1nd 75 48 possess possess VB cord-048471-7jszm1nd 75 49 any any DT cord-048471-7jszm1nd 75 50 IRES ires JJ cord-048471-7jszm1nd 75 51 - - HYPH cord-048471-7jszm1nd 75 52 like like JJ cord-048471-7jszm1nd 75 53 functions function NNS cord-048471-7jszm1nd 75 54 . . . cord-048471-7jszm1nd 76 1 As as IN cord-048471-7jszm1nd 76 2 it -PRON- PRP cord-048471-7jszm1nd 76 3 was be VBD cord-048471-7jszm1nd 76 4 clear clear JJ cord-048471-7jszm1nd 76 5 that that IN cord-048471-7jszm1nd 76 6 the the DT cord-048471-7jszm1nd 76 7 JV JV NNP cord-048471-7jszm1nd 76 8 59GS 59gs CD cord-048471-7jszm1nd 76 9 did do VBD cord-048471-7jszm1nd 76 10 not not RB cord-048471-7jszm1nd 76 11 posses posse VBZ cord-048471-7jszm1nd 76 12 any any DT cord-048471-7jszm1nd 76 13 IRES IRES NNP cord-048471-7jszm1nd 76 14 - - HYPH cord-048471-7jszm1nd 76 15 like like JJ cord-048471-7jszm1nd 76 16 functions function NNS cord-048471-7jszm1nd 76 17 it -PRON- PRP cord-048471-7jszm1nd 76 18 was be VBD cord-048471-7jszm1nd 76 19 necessary necessary JJ cord-048471-7jszm1nd 76 20 to to TO cord-048471-7jszm1nd 76 21 determine determine VB cord-048471-7jszm1nd 76 22 the the DT cord-048471-7jszm1nd 76 23 location location NN cord-048471-7jszm1nd 76 24 of of IN cord-048471-7jszm1nd 76 25 translation translation NN cord-048471-7jszm1nd 76 26 initiation initiation NN cord-048471-7jszm1nd 76 27 within within IN cord-048471-7jszm1nd 76 28 ORF1 ORF1 NNP cord-048471-7jszm1nd 76 29 . . . cord-048471-7jszm1nd 77 1 This this DT cord-048471-7jszm1nd 77 2 was be VBD cord-048471-7jszm1nd 77 3 predicted predict VBN cord-048471-7jszm1nd 77 4 be be VB cord-048471-7jszm1nd 77 5 the the DT cord-048471-7jszm1nd 77 6 ATG ATG NNP cord-048471-7jszm1nd 77 7 encoding encode VBG cord-048471-7jszm1nd 77 8 methionine methionine NN cord-048471-7jszm1nd 77 9 at at IN cord-048471-7jszm1nd 77 10 nucleotide nucleotide JJ cord-048471-7jszm1nd 77 11 position position NN cord-048471-7jszm1nd 77 12 22 22 CD cord-048471-7jszm1nd 77 13 , , , cord-048471-7jszm1nd 77 14 as as IN cord-048471-7jszm1nd 77 15 it -PRON- PRP cord-048471-7jszm1nd 77 16 is be VBZ cord-048471-7jszm1nd 77 17 situated situate VBN cord-048471-7jszm1nd 77 18 in in IN cord-048471-7jszm1nd 77 19 a a DT cord-048471-7jszm1nd 77 20 favourable favourable JJ cord-048471-7jszm1nd 77 21 context context NN cord-048471-7jszm1nd 77 22 for for IN cord-048471-7jszm1nd 77 23 translation translation NN cord-048471-7jszm1nd 77 24 initiation initiation NN cord-048471-7jszm1nd 77 25 [ [ -LRB- cord-048471-7jszm1nd 77 26 7 7 CD cord-048471-7jszm1nd 77 27 ] ] -RRB- cord-048471-7jszm1nd 77 28 . . . cord-048471-7jszm1nd 78 1 To to TO cord-048471-7jszm1nd 78 2 investigate investigate VB cord-048471-7jszm1nd 78 3 this this DT cord-048471-7jszm1nd 78 4 multiple multiple JJ cord-048471-7jszm1nd 78 5 translation translation NN cord-048471-7jszm1nd 78 6 termination termination NN cord-048471-7jszm1nd 78 7 codons codon NNS cord-048471-7jszm1nd 78 8 ( ( -LRB- cord-048471-7jszm1nd 78 9 polySTOP polySTOP NNP cord-048471-7jszm1nd 78 10 ) ) -RRB- cord-048471-7jszm1nd 78 11 were be VBD cord-048471-7jszm1nd 78 12 inserted insert VBN cord-048471-7jszm1nd 78 13 into into IN cord-048471-7jszm1nd 78 14 the the DT cord-048471-7jszm1nd 78 15 JV JV NNP cord-048471-7jszm1nd 78 16 genome genome NN cord-048471-7jszm1nd 78 17 within within IN cord-048471-7jszm1nd 78 18 the the DT cord-048471-7jszm1nd 78 19 3B 3b NN cord-048471-7jszm1nd 78 20 - - HYPH cord-048471-7jszm1nd 78 21 encoding encode VBG cord-048471-7jszm1nd 78 22 region region NN cord-048471-7jszm1nd 78 23 , , , cord-048471-7jszm1nd 78 24 downstream downstream RB cord-048471-7jszm1nd 78 25 of of IN cord-048471-7jszm1nd 78 26 the the DT cord-048471-7jszm1nd 78 27 59GS 59gs CD cord-048471-7jszm1nd 78 28 , , , cord-048471-7jszm1nd 78 29 to to TO cord-048471-7jszm1nd 78 30 halt halt VB cord-048471-7jszm1nd 78 31 translation translation NN cord-048471-7jszm1nd 78 32 at at IN cord-048471-7jszm1nd 78 33 a a DT cord-048471-7jszm1nd 78 34 defined define VBN cord-048471-7jszm1nd 78 35 point point NN cord-048471-7jszm1nd 78 36 . . . cord-048471-7jszm1nd 79 1 In in IN cord-048471-7jszm1nd 79 2 vitro vitro FW cord-048471-7jszm1nd 79 3 transcription transcription NN cord-048471-7jszm1nd 79 4 and and CC cord-048471-7jszm1nd 79 5 translation translation NN cord-048471-7jszm1nd 79 6 of of IN cord-048471-7jszm1nd 79 7 this this DT cord-048471-7jszm1nd 79 8 construct construct NN cord-048471-7jszm1nd 79 9 would would MD cord-048471-7jszm1nd 79 10 , , , cord-048471-7jszm1nd 79 11 in in IN cord-048471-7jszm1nd 79 12 theory theory NN cord-048471-7jszm1nd 79 13 , , , cord-048471-7jszm1nd 79 14 yield yield VB cord-048471-7jszm1nd 79 15 a a DT cord-048471-7jszm1nd 79 16 product product NN cord-048471-7jszm1nd 79 17 whose whose WP$ cord-048471-7jszm1nd 79 18 size size NN cord-048471-7jszm1nd 79 19 would would MD cord-048471-7jszm1nd 79 20 relate relate VB cord-048471-7jszm1nd 79 21 to to IN cord-048471-7jszm1nd 79 22 the the DT cord-048471-7jszm1nd 79 23 initiation initiation NN cord-048471-7jszm1nd 79 24 codon codon NN cord-048471-7jszm1nd 79 25 used use VBN cord-048471-7jszm1nd 79 26 within within IN cord-048471-7jszm1nd 79 27 the the DT cord-048471-7jszm1nd 79 28 59GS 59gs CD cord-048471-7jszm1nd 79 29 ( ( -LRB- cord-048471-7jszm1nd 79 30 Figure figure NN cord-048471-7jszm1nd 79 31 3 3 CD cord-048471-7jszm1nd 79 32 ) ) -RRB- cord-048471-7jszm1nd 79 33 . . . cord-048471-7jszm1nd 80 1 To to TO cord-048471-7jszm1nd 80 2 address address VB cord-048471-7jszm1nd 80 3 the the DT cord-048471-7jszm1nd 80 4 unlikely unlikely JJ cord-048471-7jszm1nd 80 5 event event NN cord-048471-7jszm1nd 80 6 of of IN cord-048471-7jszm1nd 80 7 translation translation NN cord-048471-7jszm1nd 80 8 read read VBN cord-048471-7jszm1nd 80 9 - - HYPH cord-048471-7jszm1nd 80 10 through through NN cord-048471-7jszm1nd 80 11 or or CC cord-048471-7jszm1nd 80 12 re re NN cord-048471-7jszm1nd 80 13 - - NN cord-048471-7jszm1nd 80 14 initiation initiation NN cord-048471-7jszm1nd 80 15 downstream downstream RB cord-048471-7jszm1nd 80 16 of of IN cord-048471-7jszm1nd 80 17 the the DT cord-048471-7jszm1nd 80 18 polySTOP polystop NN cord-048471-7jszm1nd 80 19 , , , cord-048471-7jszm1nd 80 20 which which WDT cord-048471-7jszm1nd 80 21 would would MD cord-048471-7jszm1nd 80 22 result result VB cord-048471-7jszm1nd 80 23 in in IN cord-048471-7jszm1nd 80 24 subsequent subsequent JJ cord-048471-7jszm1nd 80 25 translation translation NN cord-048471-7jszm1nd 80 26 of of IN cord-048471-7jszm1nd 80 27 the the DT cord-048471-7jszm1nd 80 28 3C 3C NNP cord-048471-7jszm1nd 80 29 protease protease NN cord-048471-7jszm1nd 80 30 and and CC cord-048471-7jszm1nd 80 31 cleavage cleavage NN cord-048471-7jszm1nd 80 32 of of IN cord-048471-7jszm1nd 80 33 the the DT cord-048471-7jszm1nd 80 34 truncated truncated JJ cord-048471-7jszm1nd 80 35 ORF1 ORF1 NNP cord-048471-7jszm1nd 80 36 polyprotein polyprotein NN cord-048471-7jszm1nd 80 37 , , , cord-048471-7jszm1nd 80 38 a a DT cord-048471-7jszm1nd 80 39 mutation mutation NN cord-048471-7jszm1nd 80 40 was be VBD cord-048471-7jszm1nd 80 41 made make VBN cord-048471-7jszm1nd 80 42 within within IN cord-048471-7jszm1nd 80 43 the the DT cord-048471-7jszm1nd 80 44 active active JJ cord-048471-7jszm1nd 80 45 site site NN cord-048471-7jszm1nd 80 46 encoding encode VBG cord-048471-7jszm1nd 80 47 region region NN cord-048471-7jszm1nd 80 48 of of IN cord-048471-7jszm1nd 80 49 the the DT cord-048471-7jszm1nd 80 50 3C 3C NNP cord-048471-7jszm1nd 80 51 protease protease NN cord-048471-7jszm1nd 80 52 within within IN cord-048471-7jszm1nd 80 53 JV JV NNP cord-048471-7jszm1nd 80 54 ORF1 ORF1 NNP cord-048471-7jszm1nd 80 55 , , , cord-048471-7jszm1nd 80 56 to to TO cord-048471-7jszm1nd 80 57 prevent prevent VB cord-048471-7jszm1nd 80 58 any any DT cord-048471-7jszm1nd 80 59 viral viral JJ cord-048471-7jszm1nd 80 60 mediated mediate VBN cord-048471-7jszm1nd 80 61 cleavage cleavage NN cord-048471-7jszm1nd 80 62 of of IN cord-048471-7jszm1nd 80 63 ORF1 ORF1 NNP cord-048471-7jszm1nd 80 64 translation translation NN cord-048471-7jszm1nd 80 65 products product NNS cord-048471-7jszm1nd 80 66 ( ( -LRB- cord-048471-7jszm1nd 80 67 JV JV NNP cord-048471-7jszm1nd 80 68 3C 3C NNP cord-048471-7jszm1nd 80 69 mut mut NNP cord-048471-7jszm1nd 80 70 /polySTOP /polySTOP NNP cord-048471-7jszm1nd 80 71 ) ) -RRB- cord-048471-7jszm1nd 80 72 . . . cord-048471-7jszm1nd 81 1 A a DT cord-048471-7jszm1nd 81 2 point point NN cord-048471-7jszm1nd 81 3 mutation mutation NN cord-048471-7jszm1nd 81 4 of of IN cord-048471-7jszm1nd 81 5 the the DT cord-048471-7jszm1nd 81 6 critical critical JJ cord-048471-7jszm1nd 81 7 cysteine cysteine NN cord-048471-7jszm1nd 81 8 residue residue NN cord-048471-7jszm1nd 81 9 within within IN cord-048471-7jszm1nd 81 10 the the DT cord-048471-7jszm1nd 81 11 highly highly RB cord-048471-7jszm1nd 81 12 conserved conserve VBN cord-048471-7jszm1nd 81 13 GDCG GDCG NNP cord-048471-7jszm1nd 81 14 motif motif NN cord-048471-7jszm1nd 81 15 to to IN cord-048471-7jszm1nd 81 16 a a DT cord-048471-7jszm1nd 81 17 glycine glycine NN cord-048471-7jszm1nd 81 18 residue residue NN cord-048471-7jszm1nd 81 19 was be VBD cord-048471-7jszm1nd 81 20 performed perform VBN cord-048471-7jszm1nd 81 21 , , , cord-048471-7jszm1nd 81 22 and and CC cord-048471-7jszm1nd 81 23 this this DT cord-048471-7jszm1nd 81 24 approach approach NN cord-048471-7jszm1nd 81 25 has have VBZ cord-048471-7jszm1nd 81 26 been be VBN cord-048471-7jszm1nd 81 27 described describe VBN cord-048471-7jszm1nd 81 28 for for IN cord-048471-7jszm1nd 81 29 the the DT cord-048471-7jszm1nd 81 30 successful successful JJ cord-048471-7jszm1nd 81 31 inactivation inactivation NN cord-048471-7jszm1nd 81 32 of of IN cord-048471-7jszm1nd 81 33 other other JJ cord-048471-7jszm1nd 81 34 norovirus norovirus NN cord-048471-7jszm1nd 81 35 ' ' POS cord-048471-7jszm1nd 81 36 3C 3c NN cord-048471-7jszm1nd 81 37 activity activity NN cord-048471-7jszm1nd 81 38 [ [ -LRB- cord-048471-7jszm1nd 81 39 28 28 CD cord-048471-7jszm1nd 81 40 ] ] -RRB- cord-048471-7jszm1nd 81 41 . . . cord-048471-7jszm1nd 82 1 In in IN cord-048471-7jszm1nd 82 2 vitro vitro FW cord-048471-7jszm1nd 82 3 transcription transcription NN cord-048471-7jszm1nd 82 4 and and CC cord-048471-7jszm1nd 82 5 translation translation NN cord-048471-7jszm1nd 82 6 analysis analysis NN cord-048471-7jszm1nd 82 7 was be VBD cord-048471-7jszm1nd 82 8 performed perform VBN cord-048471-7jszm1nd 82 9 on on IN cord-048471-7jszm1nd 82 10 JV JV NNP cord-048471-7jszm1nd 82 11 wild wild JJ cord-048471-7jszm1nd 82 12 type type NN cord-048471-7jszm1nd 82 13 ( ( -LRB- cord-048471-7jszm1nd 82 14 Figure figure NN cord-048471-7jszm1nd 82 15 4 4 CD cord-048471-7jszm1nd 82 16 within within IN cord-048471-7jszm1nd 82 17 the the DT cord-048471-7jszm1nd 82 18 3C 3C NNP cord-048471-7jszm1nd 82 19 region region NN cord-048471-7jszm1nd 82 20 of of IN cord-048471-7jszm1nd 82 21 JV JV NNP cord-048471-7jszm1nd 82 22 successfully successfully RB cord-048471-7jszm1nd 82 23 inactivated inactivate VBD cord-048471-7jszm1nd 82 24 the the DT cord-048471-7jszm1nd 82 25 3C 3C NNP cord-048471-7jszm1nd 82 26 protease protease NN cord-048471-7jszm1nd 82 27 , , , cord-048471-7jszm1nd 82 28 thus thus RB cord-048471-7jszm1nd 82 29 a a DT cord-048471-7jszm1nd 82 30 large large JJ cord-048471-7jszm1nd 82 31 , , , cord-048471-7jszm1nd 82 32 .200kDa .200kDa NFP cord-048471-7jszm1nd 82 33 uncleaved uncleaved NNP cord-048471-7jszm1nd 82 34 polyprotein polyprotein NNP cord-048471-7jszm1nd 82 35 is be VBZ cord-048471-7jszm1nd 82 36 yielded yield VBN cord-048471-7jszm1nd 82 37 following follow VBG cord-048471-7jszm1nd 82 38 TNTH TNTH NNS cord-048471-7jszm1nd 82 39 . . . cord-048471-7jszm1nd 83 1 The the DT cord-048471-7jszm1nd 83 2 major major JJ cord-048471-7jszm1nd 83 3 product product NN cord-048471-7jszm1nd 83 4 generated generate VBN cord-048471-7jszm1nd 83 5 by by IN cord-048471-7jszm1nd 83 6 JV JV NNP cord-048471-7jszm1nd 83 7 3C 3C NNP cord-048471-7jszm1nd 83 8 mut mut NNP cord-048471-7jszm1nd 83 9 / / SYM cord-048471-7jszm1nd 83 10 polySTOP polySTOP NNP cord-048471-7jszm1nd 83 11 was be VBD cord-048471-7jszm1nd 83 12 calculated calculate VBN cord-048471-7jszm1nd 83 13 to to TO cord-048471-7jszm1nd 83 14 be be VB cord-048471-7jszm1nd 83 15 103kDa 103kDa VBN cord-048471-7jszm1nd 83 16 in in IN cord-048471-7jszm1nd 83 17 size size NN cord-048471-7jszm1nd 83 18 . . . cord-048471-7jszm1nd 84 1 Based base VBN cord-048471-7jszm1nd 84 2 on on IN cord-048471-7jszm1nd 84 3 computer computer NN cord-048471-7jszm1nd 84 4 predictions prediction NNS cord-048471-7jszm1nd 84 5 this this DT cord-048471-7jszm1nd 84 6 is be VBZ cord-048471-7jszm1nd 84 7 in in IN cord-048471-7jszm1nd 84 8 agreement agreement NN cord-048471-7jszm1nd 84 9 with with IN cord-048471-7jszm1nd 84 10 the the DT cord-048471-7jszm1nd 84 11 initiation initiation NN cord-048471-7jszm1nd 84 12 of of IN cord-048471-7jszm1nd 84 13 translation translation NN cord-048471-7jszm1nd 84 14 occurring occur VBG cord-048471-7jszm1nd 84 15 at at IN cord-048471-7jszm1nd 84 16 nucleotide nucleotide JJ cord-048471-7jszm1nd 84 17 22 22 CD cord-048471-7jszm1nd 84 18 , , , cord-048471-7jszm1nd 84 19 which which WDT cord-048471-7jszm1nd 84 20 demonstrates demonstrate VBZ cord-048471-7jszm1nd 84 21 that that IN cord-048471-7jszm1nd 84 22 the the DT cord-048471-7jszm1nd 84 23 JV JV NNP cord-048471-7jszm1nd 84 24 N N NNP cord-048471-7jszm1nd 84 25 - - HYPH cord-048471-7jszm1nd 84 26 term term NN cord-048471-7jszm1nd 84 27 protein protein NN cord-048471-7jszm1nd 84 28 is be VBZ cord-048471-7jszm1nd 84 29 translated translate VBN cord-048471-7jszm1nd 84 30 in in IN cord-048471-7jszm1nd 84 31 full full JJ cord-048471-7jszm1nd 84 32 in in IN cord-048471-7jszm1nd 84 33 vitro vitro FW cord-048471-7jszm1nd 84 34 . . . cord-048471-7jszm1nd 85 1 At at IN cord-048471-7jszm1nd 85 2 this this DT cord-048471-7jszm1nd 85 3 time time NN cord-048471-7jszm1nd 85 4 it -PRON- PRP cord-048471-7jszm1nd 85 5 is be VBZ cord-048471-7jszm1nd 85 6 not not RB cord-048471-7jszm1nd 85 7 possible possible JJ cord-048471-7jszm1nd 85 8 to to TO cord-048471-7jszm1nd 85 9 determine determine VB cord-048471-7jszm1nd 85 10 whether whether IN cord-048471-7jszm1nd 85 11 translation translation NN cord-048471-7jszm1nd 85 12 of of IN cord-048471-7jszm1nd 85 13 intracellular intracellular JJ cord-048471-7jszm1nd 85 14 VPgbound vpgbound JJ cord-048471-7jszm1nd 85 15 viral viral JJ cord-048471-7jszm1nd 85 16 RNA RNA NNP cord-048471-7jszm1nd 85 17 initiates initiate NNS cord-048471-7jszm1nd 85 18 at at IN cord-048471-7jszm1nd 85 19 nucleotide nucleotide JJ cord-048471-7jszm1nd 85 20 22 22 CD cord-048471-7jszm1nd 85 21 , , , cord-048471-7jszm1nd 85 22 although although IN cord-048471-7jszm1nd 85 23 it -PRON- PRP cord-048471-7jszm1nd 85 24 is be VBZ cord-048471-7jszm1nd 85 25 likely likely RB cord-048471-7jszm1nd 85 26 given give VBN cord-048471-7jszm1nd 85 27 the the DT cord-048471-7jszm1nd 85 28 favourable favourable JJ cord-048471-7jszm1nd 85 29 context context NN cord-048471-7jszm1nd 85 30 in in IN cord-048471-7jszm1nd 85 31 which which WDT cord-048471-7jszm1nd 85 32 the the DT cord-048471-7jszm1nd 85 33 initiation initiation NN cord-048471-7jszm1nd 85 34 codon codon NN cord-048471-7jszm1nd 85 35 is be VBZ cord-048471-7jszm1nd 85 36 situated situate VBN cord-048471-7jszm1nd 85 37 . . . cord-048471-7jszm1nd 86 1 As as IN cord-048471-7jszm1nd 86 2 the the DT cord-048471-7jszm1nd 86 3 JV JV NNP cord-048471-7jszm1nd 86 4 N N NNP cord-048471-7jszm1nd 86 5 - - HYPH cord-048471-7jszm1nd 86 6 term term NN cord-048471-7jszm1nd 86 7 was be VBD cord-048471-7jszm1nd 86 8 found find VBN cord-048471-7jszm1nd 86 9 to to TO cord-048471-7jszm1nd 86 10 be be VB cord-048471-7jszm1nd 86 11 translated translate VBN cord-048471-7jszm1nd 86 12 in in IN cord-048471-7jszm1nd 86 13 vitro vitro FW cord-048471-7jszm1nd 86 14 attempts attempt NNS cord-048471-7jszm1nd 86 15 were be VBD cord-048471-7jszm1nd 86 16 made make VBN cord-048471-7jszm1nd 86 17 to to TO cord-048471-7jszm1nd 86 18 express express VB cord-048471-7jszm1nd 86 19 and and CC cord-048471-7jszm1nd 86 20 purify purify VB cord-048471-7jszm1nd 86 21 the the DT cord-048471-7jszm1nd 86 22 protein protein NN cord-048471-7jszm1nd 86 23 in in IN cord-048471-7jszm1nd 86 24 bacteria bacteria NNS cord-048471-7jszm1nd 86 25 for for IN cord-048471-7jszm1nd 86 26 immunisation immunisation NN cord-048471-7jszm1nd 86 27 so so IN cord-048471-7jszm1nd 86 28 that that IN cord-048471-7jszm1nd 86 29 the the DT cord-048471-7jszm1nd 86 30 protein protein NN cord-048471-7jszm1nd 86 31 could could MD cord-048471-7jszm1nd 86 32 be be VB cord-048471-7jszm1nd 86 33 identified identify VBN cord-048471-7jszm1nd 86 34 by by IN cord-048471-7jszm1nd 86 35 radioimmune radioimmune JJ cord-048471-7jszm1nd 86 36 precipitation precipitation NN cord-048471-7jszm1nd 86 37 assay assay NN cord-048471-7jszm1nd 86 38 ( ( -LRB- cord-048471-7jszm1nd 86 39 RIPA RIPA NNP cord-048471-7jszm1nd 86 40 ) ) -RRB- cord-048471-7jszm1nd 86 41 , , , cord-048471-7jszm1nd 86 42 as as IN cord-048471-7jszm1nd 86 43 it -PRON- PRP cord-048471-7jszm1nd 86 44 was be VBD cord-048471-7jszm1nd 86 45 possible possible JJ cord-048471-7jszm1nd 86 46 that that IN cord-048471-7jszm1nd 86 47 the the DT cord-048471-7jszm1nd 86 48 Nterm Nterm NNP cord-048471-7jszm1nd 86 49 protein protein NN cord-048471-7jszm1nd 86 50 was be VBD cord-048471-7jszm1nd 86 51 migrating migrate VBG cord-048471-7jszm1nd 86 52 on on IN cord-048471-7jszm1nd 86 53 gels gel NNS cord-048471-7jszm1nd 86 54 aberrantly aberrantly RB cord-048471-7jszm1nd 86 55 and and CC cord-048471-7jszm1nd 86 56 possibly possibly RB cord-048471-7jszm1nd 86 57 comigrating comigrate VBG cord-048471-7jszm1nd 86 58 with with IN cord-048471-7jszm1nd 86 59 2C. 2c. CD cord-048471-7jszm1nd 86 60 Attempts attempt NNS cord-048471-7jszm1nd 86 61 to to TO cord-048471-7jszm1nd 86 62 express express VB cord-048471-7jszm1nd 86 63 the the DT cord-048471-7jszm1nd 86 64 protein protein NN cord-048471-7jszm1nd 86 65 in in IN cord-048471-7jszm1nd 86 66 bacteria bacteria NNS cord-048471-7jszm1nd 86 67 were be VBD cord-048471-7jszm1nd 86 68 unsuccessful unsuccessful JJ cord-048471-7jszm1nd 86 69 due due IN cord-048471-7jszm1nd 86 70 to to IN cord-048471-7jszm1nd 86 71 toxicity toxicity NN cord-048471-7jszm1nd 86 72 . . . cord-048471-7jszm1nd 87 1 Therefore therefore RB cord-048471-7jszm1nd 87 2 , , , cord-048471-7jszm1nd 87 3 the the DT cord-048471-7jszm1nd 87 4 14aa 14aa JJ cord-048471-7jszm1nd 87 5 V5 v5 NN cord-048471-7jszm1nd 87 6 epitope epitope NN cord-048471-7jszm1nd 87 7 encoding encode VBG cord-048471-7jszm1nd 87 8 sequence sequence NN cord-048471-7jszm1nd 87 9 was be VBD cord-048471-7jszm1nd 87 10 cloned clone VBN cord-048471-7jszm1nd 87 11 in in IN cord-048471-7jszm1nd 87 12 frame frame NN cord-048471-7jszm1nd 87 13 into into IN cord-048471-7jszm1nd 87 14 the the DT cord-048471-7jszm1nd 87 15 JV JV NNP cord-048471-7jszm1nd 87 16 cDNA cdna NN cord-048471-7jszm1nd 87 17 construct construct NN cord-048471-7jszm1nd 87 18 at at IN cord-048471-7jszm1nd 87 19 nucleotide nucleotide JJ cord-048471-7jszm1nd 87 20 position position NN cord-048471-7jszm1nd 87 21 123 123 CD cord-048471-7jszm1nd 87 22 ( ( -LRB- cord-048471-7jszm1nd 87 23 JV JV NNP cord-048471-7jszm1nd 87 24 V5 V5 NNP cord-048471-7jszm1nd 87 25 ) ) -RRB- cord-048471-7jszm1nd 87 26 . . . cord-048471-7jszm1nd 88 1 The the DT cord-048471-7jszm1nd 88 2 V5 V5 NNP cord-048471-7jszm1nd 88 3 epitope epitope NN cord-048471-7jszm1nd 88 4 originates originate VBZ cord-048471-7jszm1nd 88 5 from from IN cord-048471-7jszm1nd 88 6 the the DT cord-048471-7jszm1nd 88 7 P p NN cord-048471-7jszm1nd 88 8 and and CC cord-048471-7jszm1nd 88 9 V v NN cord-048471-7jszm1nd 88 10 proteins protein NNS cord-048471-7jszm1nd 88 11 of of IN cord-048471-7jszm1nd 88 12 the the DT cord-048471-7jszm1nd 88 13 SV5 SV5 NNP cord-048471-7jszm1nd 88 14 paramyxovirus paramyxovirus NNP cord-048471-7jszm1nd 88 15 [ [ -LRB- cord-048471-7jszm1nd 88 16 29 29 CD cord-048471-7jszm1nd 88 17 ] ] -RRB- cord-048471-7jszm1nd 88 18 , , , cord-048471-7jszm1nd 88 19 for for IN cord-048471-7jszm1nd 88 20 which which WDT cord-048471-7jszm1nd 88 21 a a DT cord-048471-7jszm1nd 88 22 commercially commercially RB cord-048471-7jszm1nd 88 23 available available JJ cord-048471-7jszm1nd 88 24 monoclonal monoclonal JJ cord-048471-7jszm1nd 88 25 antibody antibody NN cord-048471-7jszm1nd 88 26 is be VBZ cord-048471-7jszm1nd 88 27 used use VBN cord-048471-7jszm1nd 88 28 for for IN cord-048471-7jszm1nd 88 29 detection detection NN cord-048471-7jszm1nd 88 30 . . . cord-048471-7jszm1nd 89 1 Following follow VBG cord-048471-7jszm1nd 89 2 in in IN cord-048471-7jszm1nd 89 3 vitro vitro FW cord-048471-7jszm1nd 89 4 transcription transcription NN cord-048471-7jszm1nd 89 5 and and CC cord-048471-7jszm1nd 89 6 translation translation NN cord-048471-7jszm1nd 89 7 of of IN cord-048471-7jszm1nd 89 8 JV JV NNP cord-048471-7jszm1nd 89 9 V5 V5 NNP cord-048471-7jszm1nd 89 10 a a DT cord-048471-7jszm1nd 89 11 new new JJ cord-048471-7jszm1nd 89 12 product product NN cord-048471-7jszm1nd 89 13 , , , cord-048471-7jszm1nd 89 14 approximately approximately RB cord-048471-7jszm1nd 89 15 42 42 CD cord-048471-7jszm1nd 89 16 kDa kDa NNS cord-048471-7jszm1nd 89 17 in in IN cord-048471-7jszm1nd 89 18 size size NN cord-048471-7jszm1nd 89 19 , , , cord-048471-7jszm1nd 89 20 was be VBD cord-048471-7jszm1nd 89 21 visible visible JJ cord-048471-7jszm1nd 89 22 ( ( -LRB- cord-048471-7jszm1nd 89 23 Figure figure NN cord-048471-7jszm1nd 89 24 5 5 CD cord-048471-7jszm1nd 89 25 , , , cord-048471-7jszm1nd 89 26 lane lane NN cord-048471-7jszm1nd 89 27 2 2 CD cord-048471-7jszm1nd 89 28 ) ) -RRB- cord-048471-7jszm1nd 89 29 . . . cord-048471-7jszm1nd 90 1 This this DT cord-048471-7jszm1nd 90 2 product product NN cord-048471-7jszm1nd 90 3 was be VBD cord-048471-7jszm1nd 90 4 not not RB cord-048471-7jszm1nd 90 5 observed observe VBN cord-048471-7jszm1nd 90 6 in in IN cord-048471-7jszm1nd 90 7 any any DT cord-048471-7jszm1nd 90 8 prior prior JJ cord-048471-7jszm1nd 90 9 analyses analysis NNS cord-048471-7jszm1nd 90 10 of of IN cord-048471-7jszm1nd 90 11 JV JV NNP cord-048471-7jszm1nd 90 12 . . . cord-048471-7jszm1nd 91 1 To to TO cord-048471-7jszm1nd 91 2 confirm confirm VB cord-048471-7jszm1nd 91 3 that that IN cord-048471-7jszm1nd 91 4 this this DT cord-048471-7jszm1nd 91 5 protein protein NN cord-048471-7jszm1nd 91 6 was be VBD cord-048471-7jszm1nd 91 7 V5 V5 NNP cord-048471-7jszm1nd 91 8 / / SYM cord-048471-7jszm1nd 91 9 N n CD cord-048471-7jszm1nd 91 10 - - HYPH cord-048471-7jszm1nd 91 11 term term NN cord-048471-7jszm1nd 91 12 associated associate VBN cord-048471-7jszm1nd 92 1 the the DT cord-048471-7jszm1nd 92 2 TNTH TNTH NNP cord-048471-7jszm1nd 92 3 reaction reaction NN cord-048471-7jszm1nd 92 4 was be VBD cord-048471-7jszm1nd 92 5 subjected subject VBN cord-048471-7jszm1nd 92 6 to to IN cord-048471-7jszm1nd 92 7 RIPA RIPA NNP cord-048471-7jszm1nd 92 8 using use VBG cord-048471-7jszm1nd 92 9 the the DT cord-048471-7jszm1nd 92 10 anti anti JJ cord-048471-7jszm1nd 92 11 - - JJ cord-048471-7jszm1nd 92 12 V5 v5 JJ cord-048471-7jszm1nd 92 13 antibody antibody NN cord-048471-7jszm1nd 92 14 ( ( -LRB- cord-048471-7jszm1nd 92 15 Figure Figure NNP cord-048471-7jszm1nd 92 16 5 5 CD cord-048471-7jszm1nd 92 17 , , , cord-048471-7jszm1nd 92 18 lane lane NN cord-048471-7jszm1nd 92 19 3 3 CD cord-048471-7jszm1nd 92 20 ) ) -RRB- cord-048471-7jszm1nd 92 21 . . . cord-048471-7jszm1nd 93 1 This this DT cord-048471-7jszm1nd 93 2 confirmed confirm VBD cord-048471-7jszm1nd 93 3 expression expression NN cord-048471-7jszm1nd 93 4 of of IN cord-048471-7jszm1nd 93 5 the the DT cord-048471-7jszm1nd 93 6 N n CD cord-048471-7jszm1nd 93 7 - - HYPH cord-048471-7jszm1nd 93 8 term term NN cord-048471-7jszm1nd 93 9 protein protein NN cord-048471-7jszm1nd 93 10 in in IN cord-048471-7jszm1nd 93 11 vitro vitro FW cord-048471-7jszm1nd 93 12 . . . cord-048471-7jszm1nd 94 1 To to TO cord-048471-7jszm1nd 94 2 confirm confirm VB cord-048471-7jszm1nd 94 3 expression expression NN cord-048471-7jszm1nd 94 4 of of IN cord-048471-7jszm1nd 94 5 the the DT cord-048471-7jszm1nd 94 6 V5 V5 NNP cord-048471-7jszm1nd 94 7 / / SYM cord-048471-7jszm1nd 94 8 N n CD cord-048471-7jszm1nd 94 9 - - HYPH cord-048471-7jszm1nd 94 10 term term NN cord-048471-7jszm1nd 94 11 protein protein NN cord-048471-7jszm1nd 94 12 in in IN cord-048471-7jszm1nd 94 13 cell cell NN cord-048471-7jszm1nd 94 14 culture culture NN cord-048471-7jszm1nd 94 15 capped cap VBN cord-048471-7jszm1nd 94 16 RNA RNA NNP cord-048471-7jszm1nd 94 17 was be VBD cord-048471-7jszm1nd 94 18 synthesised synthesise VBN cord-048471-7jszm1nd 94 19 from from IN cord-048471-7jszm1nd 94 20 the the DT cord-048471-7jszm1nd 94 21 JV JV NNP cord-048471-7jszm1nd 94 22 V5 V5 NNP cord-048471-7jszm1nd 94 23 T7 T7 NNP cord-048471-7jszm1nd 94 24 cDNA cdna NN cord-048471-7jszm1nd 94 25 construct construct NN cord-048471-7jszm1nd 94 26 , , , cord-048471-7jszm1nd 94 27 which which WDT cord-048471-7jszm1nd 94 28 was be VBD cord-048471-7jszm1nd 94 29 used use VBN cord-048471-7jszm1nd 94 30 to to TO cord-048471-7jszm1nd 94 31 transfect transfect VB cord-048471-7jszm1nd 94 32 CRFK CRFK NNP cord-048471-7jszm1nd 94 33 cells cell NNS cord-048471-7jszm1nd 94 34 . . . cord-048471-7jszm1nd 95 1 As as IN cord-048471-7jszm1nd 95 2 there there EX cord-048471-7jszm1nd 95 3 is be VBZ cord-048471-7jszm1nd 95 4 currently currently RB cord-048471-7jszm1nd 95 5 no no DT cord-048471-7jszm1nd 95 6 host host NN cord-048471-7jszm1nd 95 7 cell cell NN cord-048471-7jszm1nd 95 8 line line NN cord-048471-7jszm1nd 95 9 in in IN cord-048471-7jszm1nd 95 10 which which WDT cord-048471-7jszm1nd 95 11 to to TO cord-048471-7jszm1nd 95 12 propagate propagate VB cord-048471-7jszm1nd 95 13 JV JV NNP cord-048471-7jszm1nd 95 14 the the DT cord-048471-7jszm1nd 95 15 CRFK CRFK NNP cord-048471-7jszm1nd 95 16 cell cell NN cord-048471-7jszm1nd 95 17 line line NN cord-048471-7jszm1nd 95 18 was be VBD cord-048471-7jszm1nd 95 19 used use VBN cord-048471-7jszm1nd 95 20 as as IN cord-048471-7jszm1nd 95 21 it -PRON- PRP cord-048471-7jszm1nd 95 22 has have VBZ cord-048471-7jszm1nd 95 23 been be VBN cord-048471-7jszm1nd 95 24 shown show VBN cord-048471-7jszm1nd 95 25 to to TO cord-048471-7jszm1nd 95 26 support support VB cord-048471-7jszm1nd 95 27 the the DT cord-048471-7jszm1nd 95 28 replication replication NN cord-048471-7jszm1nd 95 29 of of IN cord-048471-7jszm1nd 95 30 feline feline JJ cord-048471-7jszm1nd 95 31 calicivirus calicivirus NNP cord-048471-7jszm1nd 95 32 [ [ -LRB- cord-048471-7jszm1nd 95 33 30 30 CD cord-048471-7jszm1nd 95 34 ] ] -RRB- cord-048471-7jszm1nd 95 35 . . . cord-048471-7jszm1nd 96 1 Confocal confocal JJ cord-048471-7jszm1nd 96 2 immunofluorescence immunofluorescence NN cord-048471-7jszm1nd 96 3 of of IN cord-048471-7jszm1nd 96 4 transfected transfecte VBN cord-048471-7jszm1nd 96 5 cells cell NNS cord-048471-7jszm1nd 96 6 using use VBG cord-048471-7jszm1nd 96 7 the the DT cord-048471-7jszm1nd 96 8 anti anti JJ cord-048471-7jszm1nd 96 9 - - JJ cord-048471-7jszm1nd 96 10 V5 v5 JJ cord-048471-7jszm1nd 96 11 antibody antibody NN cord-048471-7jszm1nd 96 12 demonstrated demonstrate VBD cord-048471-7jszm1nd 96 13 expression expression NN cord-048471-7jszm1nd 96 14 of of IN cord-048471-7jszm1nd 96 15 the the DT cord-048471-7jszm1nd 96 16 V5 V5 NNP cord-048471-7jszm1nd 96 17 / / SYM cord-048471-7jszm1nd 96 18 Nterm Nterm NNP cord-048471-7jszm1nd 96 19 protein protein NN cord-048471-7jszm1nd 96 20 in in IN cord-048471-7jszm1nd 96 21 cultured cultured JJ cord-048471-7jszm1nd 96 22 cells cell NNS cord-048471-7jszm1nd 96 23 ( ( -LRB- cord-048471-7jszm1nd 96 24 Figure figure NN cord-048471-7jszm1nd 96 25 6 6 CD cord-048471-7jszm1nd 96 26 ) ) -RRB- cord-048471-7jszm1nd 96 27 . . . cord-048471-7jszm1nd 97 1 Expression expression NN cord-048471-7jszm1nd 97 2 of of IN cord-048471-7jszm1nd 97 3 the the DT cord-048471-7jszm1nd 97 4 V5/ v5/ NN cord-048471-7jszm1nd 98 1 Nterm Nterm NNP cord-048471-7jszm1nd 98 2 protein protein NN cord-048471-7jszm1nd 98 3 was be VBD cord-048471-7jszm1nd 98 4 diffuse diffuse JJ cord-048471-7jszm1nd 98 5 and and CC cord-048471-7jszm1nd 98 6 did do VBD cord-048471-7jszm1nd 98 7 not not RB cord-048471-7jszm1nd 98 8 co co VB cord-048471-7jszm1nd 98 9 - - VB cord-048471-7jszm1nd 98 10 localise localise VB cord-048471-7jszm1nd 98 11 with with IN cord-048471-7jszm1nd 98 12 the the DT cord-048471-7jszm1nd 98 13 Golgi/ Golgi/ NNP cord-048471-7jszm1nd 98 14 ER ER NNP cord-048471-7jszm1nd 98 15 / / SYM cord-048471-7jszm1nd 98 16 plasma plasma NN cord-048471-7jszm1nd 98 17 membrane membrane NN cord-048471-7jszm1nd 98 18 marker marker NN cord-048471-7jszm1nd 98 19 wheat wheat NN cord-048471-7jszm1nd 98 20 germ germ NNP cord-048471-7jszm1nd 98 21 agglutinin agglutinin NNP cord-048471-7jszm1nd 98 22 ( ( -LRB- cord-048471-7jszm1nd 98 23 WGA WGA NNP cord-048471-7jszm1nd 98 24 ) ) -RRB- cord-048471-7jszm1nd 98 25 and and CC cord-048471-7jszm1nd 98 26 therefore therefore RB cord-048471-7jszm1nd 98 27 displays display VBZ cord-048471-7jszm1nd 98 28 a a DT cord-048471-7jszm1nd 98 29 different different JJ cord-048471-7jszm1nd 98 30 pattern pattern NN cord-048471-7jszm1nd 98 31 of of IN cord-048471-7jszm1nd 98 32 cellular cellular JJ cord-048471-7jszm1nd 98 33 expression expression NN cord-048471-7jszm1nd 98 34 compared compare VBN cord-048471-7jszm1nd 98 35 to to IN cord-048471-7jszm1nd 98 36 Norwalk Norwalk NNP cord-048471-7jszm1nd 98 37 virus virus NN cord-048471-7jszm1nd 98 38 [ [ -LRB- cord-048471-7jszm1nd 98 39 15 15 CD cord-048471-7jszm1nd 98 40 ] ] -RRB- cord-048471-7jszm1nd 98 41 . . . cord-048471-7jszm1nd 99 1 Cells cell NNS cord-048471-7jszm1nd 99 2 transfected transfecte VBN cord-048471-7jszm1nd 99 3 with with IN cord-048471-7jszm1nd 99 4 the the DT cord-048471-7jszm1nd 99 5 wild wild JJ cord-048471-7jszm1nd 99 6 type type NN cord-048471-7jszm1nd 99 7 full full JJ cord-048471-7jszm1nd 99 8 length length NN cord-048471-7jszm1nd 99 9 JV JV NNP cord-048471-7jszm1nd 99 10 RNA RNA NNP cord-048471-7jszm1nd 99 11 were be VBD cord-048471-7jszm1nd 99 12 negative negative JJ cord-048471-7jszm1nd 99 13 for for IN cord-048471-7jszm1nd 99 14 fluorescence fluorescence NN cord-048471-7jszm1nd 99 15 ( ( -LRB- cord-048471-7jszm1nd 99 16 data datum NNS cord-048471-7jszm1nd 99 17 not not RB cord-048471-7jszm1nd 99 18 shown show VBN cord-048471-7jszm1nd 99 19 ) ) -RRB- cord-048471-7jszm1nd 99 20 . . . cord-048471-7jszm1nd 100 1 Lysates Lysates NNP cord-048471-7jszm1nd 100 2 of of IN cord-048471-7jszm1nd 100 3 cells cell NNS cord-048471-7jszm1nd 100 4 transfected transfecte VBN cord-048471-7jszm1nd 100 5 with with IN cord-048471-7jszm1nd 100 6 wild wild JJ cord-048471-7jszm1nd 100 7 type type NN cord-048471-7jszm1nd 100 8 JV JV NNP cord-048471-7jszm1nd 100 9 and and CC cord-048471-7jszm1nd 100 10 JV JV NNP cord-048471-7jszm1nd 100 11 / / SYM cord-048471-7jszm1nd 100 12 V5 V5 NNP cord-048471-7jszm1nd 100 13 RNA RNA NNP cord-048471-7jszm1nd 100 14 were be VBD cord-048471-7jszm1nd 100 15 subjected subject VBN cord-048471-7jszm1nd 100 16 to to IN cord-048471-7jszm1nd 100 17 western western JJ cord-048471-7jszm1nd 100 18 blot blot NN cord-048471-7jszm1nd 100 19 using use VBG cord-048471-7jszm1nd 100 20 the the DT cord-048471-7jszm1nd 100 21 anti anti JJ cord-048471-7jszm1nd 100 22 - - JJ cord-048471-7jszm1nd 100 23 V5 v5 JJ cord-048471-7jszm1nd 100 24 antibody antibody NN cord-048471-7jszm1nd 100 25 ( ( -LRB- cord-048471-7jszm1nd 100 26 Figure Figure NNP cord-048471-7jszm1nd 100 27 7 7 CD cord-048471-7jszm1nd 100 28 ) ) -RRB- cord-048471-7jszm1nd 100 29 . . . cord-048471-7jszm1nd 101 1 No no DT cord-048471-7jszm1nd 101 2 product product NN cord-048471-7jszm1nd 101 3 was be VBD cord-048471-7jszm1nd 101 4 present present JJ cord-048471-7jszm1nd 101 5 for for IN cord-048471-7jszm1nd 101 6 cells cell NNS cord-048471-7jszm1nd 101 7 transfected transfecte VBN cord-048471-7jszm1nd 101 8 with with IN cord-048471-7jszm1nd 101 9 wild wild JJ cord-048471-7jszm1nd 101 10 type type NN cord-048471-7jszm1nd 101 11 JV JV NNP cord-048471-7jszm1nd 101 12 RNA RNA NNP cord-048471-7jszm1nd 101 13 , , , cord-048471-7jszm1nd 101 14 but but CC cord-048471-7jszm1nd 101 15 a a DT cord-048471-7jszm1nd 101 16 protein protein NN cord-048471-7jszm1nd 101 17 of of IN cord-048471-7jszm1nd 101 18 approximately approximately RB cord-048471-7jszm1nd 101 19 42 42 CD cord-048471-7jszm1nd 101 20 kDa kDa NNS cord-048471-7jszm1nd 101 21 in in IN cord-048471-7jszm1nd 101 22 size size NN cord-048471-7jszm1nd 101 23 was be VBD cord-048471-7jszm1nd 101 24 visible visible JJ cord-048471-7jszm1nd 101 25 in in IN cord-048471-7jszm1nd 101 26 cells cell NNS cord-048471-7jszm1nd 101 27 that that WDT cord-048471-7jszm1nd 101 28 had have VBD cord-048471-7jszm1nd 101 29 been be VBN cord-048471-7jszm1nd 101 30 transfected transfecte VBN cord-048471-7jszm1nd 101 31 with with IN cord-048471-7jszm1nd 101 32 JV JV NNP cord-048471-7jszm1nd 101 33 / / SYM cord-048471-7jszm1nd 101 34 V5 V5 NNP cord-048471-7jszm1nd 101 35 RNA RNA NNP cord-048471-7jszm1nd 101 36 , , , cord-048471-7jszm1nd 101 37 confirming confirm VBG cord-048471-7jszm1nd 101 38 N n CD cord-048471-7jszm1nd 101 39 - - HYPH cord-048471-7jszm1nd 101 40 term term NN cord-048471-7jszm1nd 101 41 expression expression NN cord-048471-7jszm1nd 101 42 and and CC cord-048471-7jszm1nd 101 43 size size NN cord-048471-7jszm1nd 101 44 as as IN cord-048471-7jszm1nd 101 45 seen see VBN cord-048471-7jszm1nd 101 46 in in IN cord-048471-7jszm1nd 101 47 the the DT cord-048471-7jszm1nd 101 48 in in FW cord-048471-7jszm1nd 101 49 vitro vitro FW cord-048471-7jszm1nd 101 50 system system NN cord-048471-7jszm1nd 101 51 . . . cord-048471-7jszm1nd 102 1 In in IN cord-048471-7jszm1nd 102 2 addition addition NN cord-048471-7jszm1nd 102 3 , , , cord-048471-7jszm1nd 102 4 this this DT cord-048471-7jszm1nd 102 5 important important JJ cord-048471-7jszm1nd 102 6 observation observation NN cord-048471-7jszm1nd 102 7 also also RB cord-048471-7jszm1nd 102 8 confirms confirm VBZ cord-048471-7jszm1nd 102 9 for for IN cord-048471-7jszm1nd 102 10 the the DT cord-048471-7jszm1nd 102 11 first first JJ cord-048471-7jszm1nd 102 12 time time NN cord-048471-7jszm1nd 102 13 that that WDT cord-048471-7jszm1nd 102 14 the the DT cord-048471-7jszm1nd 102 15 JV JV NNP cord-048471-7jszm1nd 102 16 3C 3c NN cord-048471-7jszm1nd 102 17 protease protease NN cord-048471-7jszm1nd 102 18 was be VBD cord-048471-7jszm1nd 102 19 active active JJ cord-048471-7jszm1nd 102 20 in in IN cord-048471-7jszm1nd 102 21 cells cell NNS cord-048471-7jszm1nd 102 22 transfected transfecte VBN cord-048471-7jszm1nd 102 23 with with IN cord-048471-7jszm1nd 102 24 capped cap VBN cord-048471-7jszm1nd 102 25 RNA RNA NNP cord-048471-7jszm1nd 102 26 as as IN cord-048471-7jszm1nd 102 27 the the DT cord-048471-7jszm1nd 102 28 size size NN cord-048471-7jszm1nd 102 29 of of IN cord-048471-7jszm1nd 102 30 the the DT cord-048471-7jszm1nd 102 31 V5 V5 NNP cord-048471-7jszm1nd 102 32 / / SYM cord-048471-7jszm1nd 102 33 N n CD cord-048471-7jszm1nd 102 34 - - HYPH cord-048471-7jszm1nd 102 35 term term NN cord-048471-7jszm1nd 102 36 indicated indicate VBD cord-048471-7jszm1nd 102 37 successful successful JJ cord-048471-7jszm1nd 102 38 cleavage cleavage NN cord-048471-7jszm1nd 102 39 of of IN cord-048471-7jszm1nd 102 40 the the DT cord-048471-7jszm1nd 102 41 protein protein NN cord-048471-7jszm1nd 102 42 from from IN cord-048471-7jszm1nd 102 43 the the DT cord-048471-7jszm1nd 102 44 ORF1 ORF1 NNP cord-048471-7jszm1nd 102 45 polyprotein polyprotein NN cord-048471-7jszm1nd 102 46 . . . cord-048471-7jszm1nd 103 1 To to TO cord-048471-7jszm1nd 103 2 address address VB cord-048471-7jszm1nd 103 3 the the DT cord-048471-7jszm1nd 103 4 issue issue NN cord-048471-7jszm1nd 103 5 of of IN cord-048471-7jszm1nd 103 6 potential potential JJ cord-048471-7jszm1nd 103 7 rapid rapid JJ cord-048471-7jszm1nd 103 8 degradation degradation NN cord-048471-7jszm1nd 103 9 of of IN cord-048471-7jszm1nd 103 10 the the DT cord-048471-7jszm1nd 103 11 JV JV NNP cord-048471-7jszm1nd 103 12 Nterm Nterm NNP cord-048471-7jszm1nd 103 13 protein protein NN cord-048471-7jszm1nd 103 14 CRFK CRFK NNP cord-048471-7jszm1nd 103 15 cells cell NNS cord-048471-7jszm1nd 103 16 were be VBD cord-048471-7jszm1nd 103 17 transfected transfecte VBN cord-048471-7jszm1nd 103 18 with with IN cord-048471-7jszm1nd 103 19 JV JV NNP cord-048471-7jszm1nd 103 20 V5 V5 NNP cord-048471-7jszm1nd 103 21 RNA RNA NNP cord-048471-7jszm1nd 103 22 and and CC cord-048471-7jszm1nd 103 23 were be VBD cord-048471-7jszm1nd 103 24 harvested harvest VBN cord-048471-7jszm1nd 103 25 at at IN cord-048471-7jszm1nd 103 26 designated designate VBN cord-048471-7jszm1nd 103 27 time time NN cord-048471-7jszm1nd 103 28 points point NNS cord-048471-7jszm1nd 103 29 following follow VBG cord-048471-7jszm1nd 103 30 the the DT cord-048471-7jszm1nd 103 31 addition addition NN cord-048471-7jszm1nd 103 32 of of IN cord-048471-7jszm1nd 103 33 the the DT cord-048471-7jszm1nd 103 34 protein protein NN cord-048471-7jszm1nd 103 35 synthesis synthesis NN cord-048471-7jszm1nd 103 36 inhibitor inhibitor NN cord-048471-7jszm1nd 103 37 cycloheximide cycloheximide NNP cord-048471-7jszm1nd 103 38 . . . cord-048471-7jszm1nd 104 1 Cell cell NN cord-048471-7jszm1nd 104 2 lysates lysate NNS cord-048471-7jszm1nd 104 3 were be VBD cord-048471-7jszm1nd 104 4 analysed analyse VBN cord-048471-7jszm1nd 104 5 by by IN cord-048471-7jszm1nd 104 6 Western western JJ cord-048471-7jszm1nd 104 7 blot blot NN cord-048471-7jszm1nd 104 8 using use VBG cord-048471-7jszm1nd 104 9 the the DT cord-048471-7jszm1nd 104 10 anti anti JJ cord-048471-7jszm1nd 104 11 - - JJ cord-048471-7jszm1nd 104 12 V5 v5 JJ cord-048471-7jszm1nd 104 13 antibody antibody NN cord-048471-7jszm1nd 104 14 ( ( -LRB- cord-048471-7jszm1nd 104 15 Figure Figure NNP cord-048471-7jszm1nd 104 16 8 8 CD cord-048471-7jszm1nd 104 17 ) ) -RRB- cord-048471-7jszm1nd 104 18 . . . cord-048471-7jszm1nd 105 1 The the DT cord-048471-7jszm1nd 105 2 consistent consistent JJ cord-048471-7jszm1nd 105 3 appearance appearance NN cord-048471-7jszm1nd 105 4 of of IN cord-048471-7jszm1nd 105 5 the the DT cord-048471-7jszm1nd 105 6 N n CD cord-048471-7jszm1nd 105 7 - - HYPH cord-048471-7jszm1nd 105 8 term term NN cord-048471-7jszm1nd 105 9 / / SYM cord-048471-7jszm1nd 105 10 V5 v5 NN cord-048471-7jszm1nd 105 11 protein protein NN cord-048471-7jszm1nd 105 12 suggested suggest VBD cord-048471-7jszm1nd 105 13 that that IN cord-048471-7jszm1nd 105 14 it -PRON- PRP cord-048471-7jszm1nd 105 15 is be VBZ cord-048471-7jszm1nd 105 16 stable stable JJ cord-048471-7jszm1nd 105 17 and and CC cord-048471-7jszm1nd 105 18 insensitive insensitive JJ cord-048471-7jszm1nd 105 19 to to IN cord-048471-7jszm1nd 105 20 degradation degradation NN cord-048471-7jszm1nd 105 21 by by IN cord-048471-7jszm1nd 105 22 viral viral JJ cord-048471-7jszm1nd 105 23 and and CC cord-048471-7jszm1nd 105 24 host host NN cord-048471-7jszm1nd 105 25 cell cell NN cord-048471-7jszm1nd 105 26 proteases protease NNS cord-048471-7jszm1nd 105 27 . . . cord-048471-7jszm1nd 106 1 The the DT cord-048471-7jszm1nd 106 2 predicted predict VBN cord-048471-7jszm1nd 106 3 molecular molecular JJ cord-048471-7jszm1nd 106 4 weight weight NN cord-048471-7jszm1nd 106 5 of of IN cord-048471-7jszm1nd 106 6 the the DT cord-048471-7jszm1nd 106 7 JV JV NNP cord-048471-7jszm1nd 106 8 N N NNP cord-048471-7jszm1nd 106 9 - - HYPH cord-048471-7jszm1nd 106 10 term term NN cord-048471-7jszm1nd 106 11 is be VBZ cord-048471-7jszm1nd 106 12 35.3 35.3 CD cord-048471-7jszm1nd 106 13 kDa kDa NNP cord-048471-7jszm1nd 106 14 , , , cord-048471-7jszm1nd 106 15 based base VBN cord-048471-7jszm1nd 106 16 on on IN cord-048471-7jszm1nd 106 17 the the DT cord-048471-7jszm1nd 106 18 site site NN cord-048471-7jszm1nd 106 19 of of IN cord-048471-7jszm1nd 106 20 initiation initiation NN cord-048471-7jszm1nd 106 21 of of IN cord-048471-7jszm1nd 106 22 translation translation NN cord-048471-7jszm1nd 106 23 and and CC cord-048471-7jszm1nd 106 24 location location NN cord-048471-7jszm1nd 106 25 of of IN cord-048471-7jszm1nd 106 26 conserved conserved JJ cord-048471-7jszm1nd 106 27 cleavage cleavage NN cord-048471-7jszm1nd 106 28 sites site NNS cord-048471-7jszm1nd 106 29 . . . cord-048471-7jszm1nd 107 1 The the DT cord-048471-7jszm1nd 107 2 appearance appearance NN cord-048471-7jszm1nd 107 3 , , , cord-048471-7jszm1nd 107 4 therefore therefore RB cord-048471-7jszm1nd 107 5 , , , cord-048471-7jszm1nd 107 6 of of IN cord-048471-7jszm1nd 107 7 a a DT cord-048471-7jszm1nd 107 8 previously previously RB cord-048471-7jszm1nd 107 9 unseen unseen JJ cord-048471-7jszm1nd 107 10 42 42 CD cord-048471-7jszm1nd 107 11 kDa kDa NNS cord-048471-7jszm1nd 107 12 protein protein NN cord-048471-7jszm1nd 107 13 in in IN cord-048471-7jszm1nd 107 14 the the DT cord-048471-7jszm1nd 107 15 in in FW cord-048471-7jszm1nd 107 16 vitro vitro FW cord-048471-7jszm1nd 107 17 transcription transcription NN cord-048471-7jszm1nd 107 18 and and CC cord-048471-7jszm1nd 107 19 translation translation NN cord-048471-7jszm1nd 107 20 profile profile NN cord-048471-7jszm1nd 107 21 was be VBD cord-048471-7jszm1nd 107 22 unexpected unexpected JJ cord-048471-7jszm1nd 107 23 but but CC cord-048471-7jszm1nd 107 24 this this DT cord-048471-7jszm1nd 107 25 protein protein NN cord-048471-7jszm1nd 107 26 does do VBZ cord-048471-7jszm1nd 107 27 represent represent VB cord-048471-7jszm1nd 107 28 a a DT cord-048471-7jszm1nd 107 29 translation translation NN cord-048471-7jszm1nd 107 30 product product NN cord-048471-7jszm1nd 107 31 for for IN cord-048471-7jszm1nd 107 32 the the DT cord-048471-7jszm1nd 107 33 JV JV NNP cord-048471-7jszm1nd 107 34 59GS 59gs CD cord-048471-7jszm1nd 107 35 . . . cord-048471-7jszm1nd 108 1 To to IN cord-048471-7jszm1nd 108 2 date date NN cord-048471-7jszm1nd 108 3 , , , cord-048471-7jszm1nd 108 4 it -PRON- PRP cord-048471-7jszm1nd 108 5 has have VBZ cord-048471-7jszm1nd 108 6 not not RB cord-048471-7jszm1nd 108 7 been be VBN cord-048471-7jszm1nd 108 8 possible possible JJ cord-048471-7jszm1nd 108 9 to to TO cord-048471-7jszm1nd 108 10 explain explain VB cord-048471-7jszm1nd 108 11 the the DT cord-048471-7jszm1nd 108 12 difference difference NN cord-048471-7jszm1nd 108 13 in in IN cord-048471-7jszm1nd 108 14 the the DT cord-048471-7jszm1nd 108 15 predicted predict VBN cord-048471-7jszm1nd 108 16 and and CC cord-048471-7jszm1nd 108 17 observed observe VBD cord-048471-7jszm1nd 108 18 sizes size NNS cord-048471-7jszm1nd 108 19 for for IN cord-048471-7jszm1nd 108 20 the the DT cord-048471-7jszm1nd 108 21 JV JV NNP cord-048471-7jszm1nd 108 22 N N NNP cord-048471-7jszm1nd 108 23 - - HYPH cord-048471-7jszm1nd 108 24 term term NN cord-048471-7jszm1nd 108 25 , , , cord-048471-7jszm1nd 108 26 and and CC cord-048471-7jszm1nd 108 27 the the DT cord-048471-7jszm1nd 108 28 addition addition NN cord-048471-7jszm1nd 108 29 of of IN cord-048471-7jszm1nd 108 30 the the DT cord-048471-7jszm1nd 108 31 14 14 CD cord-048471-7jszm1nd 108 32 amino amino NN cord-048471-7jszm1nd 108 33 acid acid NN cord-048471-7jszm1nd 108 34 V5 v5 NN cord-048471-7jszm1nd 108 35 epitope epitope NN cord-048471-7jszm1nd 108 36 within within IN cord-048471-7jszm1nd 108 37 JV JV NNP cord-048471-7jszm1nd 108 38 N N NNP cord-048471-7jszm1nd 108 39 - - HYPH cord-048471-7jszm1nd 108 40 term term NN cord-048471-7jszm1nd 108 41 does do VBZ cord-048471-7jszm1nd 108 42 not not RB cord-048471-7jszm1nd 108 43 account account VB cord-048471-7jszm1nd 108 44 for for IN cord-048471-7jszm1nd 108 45 this this DT cord-048471-7jszm1nd 108 46 apparent apparent JJ cord-048471-7jszm1nd 108 47 large large JJ cord-048471-7jszm1nd 108 48 shift shift NN cord-048471-7jszm1nd 108 49 in in IN cord-048471-7jszm1nd 108 50 molecular molecular JJ cord-048471-7jszm1nd 108 51 weight weight NN cord-048471-7jszm1nd 108 52 . . . cord-048471-7jszm1nd 109 1 However however RB cord-048471-7jszm1nd 109 2 , , , cord-048471-7jszm1nd 109 3 a a DT cord-048471-7jszm1nd 109 4 recent recent JJ cord-048471-7jszm1nd 109 5 study study NN cord-048471-7jszm1nd 109 6 described describe VBD cord-048471-7jszm1nd 109 7 a a DT cord-048471-7jszm1nd 109 8 similar similar JJ cord-048471-7jszm1nd 109 9 anomaly anomaly NN cord-048471-7jszm1nd 109 10 when when WRB cord-048471-7jszm1nd 109 11 investigating investigate VBG cord-048471-7jszm1nd 109 12 proteolytic proteolytic JJ cord-048471-7jszm1nd 109 13 processing processing NN cord-048471-7jszm1nd 109 14 in in IN cord-048471-7jszm1nd 109 15 the the DT cord-048471-7jszm1nd 109 16 murine murine JJ cord-048471-7jszm1nd 109 17 norovirus norovirus NN cord-048471-7jszm1nd 109 18 MNV-1 MNV-1 NNP cord-048471-7jszm1nd 109 19 [ [ -LRB- cord-048471-7jszm1nd 109 20 12 12 CD cord-048471-7jszm1nd 109 21 ] ] -RRB- cord-048471-7jszm1nd 109 22 . . . cord-048471-7jszm1nd 110 1 The the DT cord-048471-7jszm1nd 110 2 predicted predict VBN cord-048471-7jszm1nd 110 3 molecular molecular JJ cord-048471-7jszm1nd 110 4 weight weight NN cord-048471-7jszm1nd 110 5 for for IN cord-048471-7jszm1nd 110 6 the the DT cord-048471-7jszm1nd 110 7 MNV-1 MNV-1 NNP cord-048471-7jszm1nd 110 8 N n CD cord-048471-7jszm1nd 110 9 - - HYPH cord-048471-7jszm1nd 110 10 term term NN cord-048471-7jszm1nd 110 11 protein protein NN cord-048471-7jszm1nd 110 12 was be VBD cord-048471-7jszm1nd 110 13 38.3 38.3 CD cord-048471-7jszm1nd 110 14 kDa kDa NNS cord-048471-7jszm1nd 110 15 . . . cord-048471-7jszm1nd 111 1 The the DT cord-048471-7jszm1nd 111 2 authors author NNS cord-048471-7jszm1nd 111 3 successfully successfully RB cord-048471-7jszm1nd 111 4 generated generate VBD cord-048471-7jszm1nd 111 5 antisera antisera NN cord-048471-7jszm1nd 111 6 against against IN cord-048471-7jszm1nd 111 7 the the DT cord-048471-7jszm1nd 111 8 MNV-1 MNV-1 NNP cord-048471-7jszm1nd 111 9 N n CD cord-048471-7jszm1nd 111 10 - - HYPH cord-048471-7jszm1nd 111 11 term term NN cord-048471-7jszm1nd 111 12 and and CC cord-048471-7jszm1nd 111 13 used use VBD cord-048471-7jszm1nd 111 14 it -PRON- PRP cord-048471-7jszm1nd 111 15 to to TO cord-048471-7jszm1nd 111 16 immunoprecipitate immunoprecipitate VB cord-048471-7jszm1nd 111 17 the the DT cord-048471-7jszm1nd 111 18 protein protein NN cord-048471-7jszm1nd 111 19 from from IN cord-048471-7jszm1nd 111 20 in in IN cord-048471-7jszm1nd 111 21 vitro vitro FW cord-048471-7jszm1nd 111 22 transcription transcription NN cord-048471-7jszm1nd 111 23 and and CC cord-048471-7jszm1nd 111 24 translation translation NN cord-048471-7jszm1nd 111 25 reactions reaction NNS cord-048471-7jszm1nd 111 26 and and CC cord-048471-7jszm1nd 111 27 observed observe VBD cord-048471-7jszm1nd 111 28 that that IN cord-048471-7jszm1nd 111 29 the the DT cord-048471-7jszm1nd 111 30 N n CD cord-048471-7jszm1nd 111 31 - - HYPH cord-048471-7jszm1nd 111 32 term term NN cord-048471-7jszm1nd 111 33 existed exist VBD cord-048471-7jszm1nd 111 34 as as IN cord-048471-7jszm1nd 111 35 a a DT cord-048471-7jszm1nd 111 36 45 45 CD cord-048471-7jszm1nd 111 37 kDa kDa NNS cord-048471-7jszm1nd 111 38 doublet doublet NN cord-048471-7jszm1nd 111 39 , , , cord-048471-7jszm1nd 111 40 in in IN cord-048471-7jszm1nd 111 41 addition addition NN cord-048471-7jszm1nd 111 42 to to IN cord-048471-7jszm1nd 111 43 the the DT cord-048471-7jszm1nd 111 44 predicted predict VBN cord-048471-7jszm1nd 111 45 size size NN cord-048471-7jszm1nd 111 46 of of IN cord-048471-7jszm1nd 111 47 38 38 CD cord-048471-7jszm1nd 111 48 kDa kDa NNS cord-048471-7jszm1nd 111 49 . . . cord-048471-7jszm1nd 112 1 However however RB cord-048471-7jszm1nd 112 2 , , , cord-048471-7jszm1nd 112 3 when when WRB cord-048471-7jszm1nd 112 4 MNV-1 MNV-1 NNP cord-048471-7jszm1nd 112 5 N n CD cord-048471-7jszm1nd 112 6 - - HYPH cord-048471-7jszm1nd 112 7 term term NN cord-048471-7jszm1nd 112 8 antisera antisera NN cord-048471-7jszm1nd 112 9 was be VBD cord-048471-7jszm1nd 112 10 used use VBN cord-048471-7jszm1nd 112 11 to to TO cord-048471-7jszm1nd 112 12 probe probe VB cord-048471-7jszm1nd 112 13 MNV-1-infected mnv-1-infected JJ cord-048471-7jszm1nd 112 14 cell cell NN cord-048471-7jszm1nd 112 15 lysates lysate NNS cord-048471-7jszm1nd 112 16 only only RB cord-048471-7jszm1nd 112 17 the the DT cord-048471-7jszm1nd 112 18 43 43 CD cord-048471-7jszm1nd 112 19 - - SYM cord-048471-7jszm1nd 112 20 45 45 CD cord-048471-7jszm1nd 112 21 kDa kDa NNS cord-048471-7jszm1nd 112 22 doublet doublet NN cord-048471-7jszm1nd 112 23 and and CC cord-048471-7jszm1nd 112 24 a a DT cord-048471-7jszm1nd 112 25 large large JJ cord-048471-7jszm1nd 112 26 115 115 CD cord-048471-7jszm1nd 112 27 kDa kDa NNS cord-048471-7jszm1nd 112 28 precursor precursor NN cord-048471-7jszm1nd 112 29 could could MD cord-048471-7jszm1nd 112 30 be be VB cord-048471-7jszm1nd 112 31 detected detect VBN cord-048471-7jszm1nd 112 32 , , , cord-048471-7jszm1nd 112 33 suggesting suggest VBG cord-048471-7jszm1nd 112 34 that that IN cord-048471-7jszm1nd 112 35 the the DT cord-048471-7jszm1nd 112 36 predicted predict VBN cord-048471-7jszm1nd 112 37 38 38 CD cord-048471-7jszm1nd 112 38 kDa kDa NNP cord-048471-7jszm1nd 112 39 form form NN cord-048471-7jszm1nd 112 40 of of IN cord-048471-7jszm1nd 112 41 the the DT cord-048471-7jszm1nd 112 42 N n CD cord-048471-7jszm1nd 112 43 - - HYPH cord-048471-7jszm1nd 112 44 term term NN cord-048471-7jszm1nd 112 45 is be VBZ cord-048471-7jszm1nd 112 46 not not RB cord-048471-7jszm1nd 112 47 generated generate VBN cord-048471-7jszm1nd 112 48 in in IN cord-048471-7jszm1nd 112 49 cell cell NN cord-048471-7jszm1nd 112 50 culture culture NN cord-048471-7jszm1nd 112 51 . . . cord-048471-7jszm1nd 113 1 Again again RB cord-048471-7jszm1nd 113 2 , , , cord-048471-7jszm1nd 113 3 it -PRON- PRP cord-048471-7jszm1nd 113 4 was be VBD cord-048471-7jszm1nd 113 5 not not RB cord-048471-7jszm1nd 113 6 possible possible JJ cord-048471-7jszm1nd 113 7 to to TO cord-048471-7jszm1nd 113 8 conclusively conclusively RB cord-048471-7jszm1nd 113 9 determine determine VB cord-048471-7jszm1nd 113 10 the the DT cord-048471-7jszm1nd 113 11 cause cause NN cord-048471-7jszm1nd 113 12 of of IN cord-048471-7jszm1nd 113 13 this this DT cord-048471-7jszm1nd 113 14 discrepancy discrepancy NN cord-048471-7jszm1nd 113 15 , , , cord-048471-7jszm1nd 113 16 but but CC cord-048471-7jszm1nd 113 17 it -PRON- PRP cord-048471-7jszm1nd 113 18 was be VBD cord-048471-7jszm1nd 113 19 speculated speculate VBN cord-048471-7jszm1nd 113 20 that that IN cord-048471-7jszm1nd 113 21 the the DT cord-048471-7jszm1nd 113 22 N n CD cord-048471-7jszm1nd 113 23 - - HYPH cord-048471-7jszm1nd 113 24 term term NN cord-048471-7jszm1nd 113 25 protein protein NN cord-048471-7jszm1nd 113 26 may may MD cord-048471-7jszm1nd 113 27 migrate migrate VB cord-048471-7jszm1nd 113 28 abnormally abnormally RB cord-048471-7jszm1nd 113 29 in in IN cord-048471-7jszm1nd 113 30 SDS SDS NNP cord-048471-7jszm1nd 113 31 - - HYPH cord-048471-7jszm1nd 113 32 PAGE PAGE NNP cord-048471-7jszm1nd 113 33 , , , cord-048471-7jszm1nd 113 34 or or CC cord-048471-7jszm1nd 113 35 may may MD cord-048471-7jszm1nd 113 36 be be VB cord-048471-7jszm1nd 113 37 proteolytically proteolytically RB cord-048471-7jszm1nd 113 38 processed process VBN cord-048471-7jszm1nd 113 39 at at IN cord-048471-7jszm1nd 113 40 a a DT cord-048471-7jszm1nd 113 41 previously previously RB cord-048471-7jszm1nd 113 42 unknown unknown JJ cord-048471-7jszm1nd 113 43 cleavage cleavage NN cord-048471-7jszm1nd 113 44 site site NN cord-048471-7jszm1nd 113 45 downstream downstream NN cord-048471-7jszm1nd 113 46 of of IN cord-048471-7jszm1nd 113 47 the the DT cord-048471-7jszm1nd 113 48 protein protein NN cord-048471-7jszm1nd 113 49 's 's POS cord-048471-7jszm1nd 113 50 predicted predict VBN cord-048471-7jszm1nd 113 51 C c NN cord-048471-7jszm1nd 113 52 - - HYPH cord-048471-7jszm1nd 113 53 terminus terminus NN cord-048471-7jszm1nd 113 54 . . . cord-048471-7jszm1nd 114 1 It -PRON- PRP cord-048471-7jszm1nd 114 2 is be VBZ cord-048471-7jszm1nd 114 3 also also RB cord-048471-7jszm1nd 114 4 possible possible JJ cord-048471-7jszm1nd 114 5 that that IN cord-048471-7jszm1nd 114 6 the the DT cord-048471-7jszm1nd 114 7 N n CD cord-048471-7jszm1nd 114 8 - - HYPH cord-048471-7jszm1nd 114 9 term term NN cord-048471-7jszm1nd 114 10 protein protein NN cord-048471-7jszm1nd 114 11 might may MD cord-048471-7jszm1nd 114 12 be be VB cord-048471-7jszm1nd 114 13 modified modify VBN cord-048471-7jszm1nd 114 14 in in IN cord-048471-7jszm1nd 114 15 some some DT cord-048471-7jszm1nd 114 16 way way NN cord-048471-7jszm1nd 114 17 leading lead VBG cord-048471-7jszm1nd 114 18 to to IN cord-048471-7jszm1nd 114 19 a a DT cord-048471-7jszm1nd 114 20 shift shift NN cord-048471-7jszm1nd 114 21 in in IN cord-048471-7jszm1nd 114 22 observed observed JJ cord-048471-7jszm1nd 114 23 molecular molecular JJ cord-048471-7jszm1nd 114 24 weight weight NN cord-048471-7jszm1nd 114 25 . . . cord-048471-7jszm1nd 115 1 At at IN cord-048471-7jszm1nd 115 2 this this DT cord-048471-7jszm1nd 115 3 time time NN cord-048471-7jszm1nd 115 4 the the DT cord-048471-7jszm1nd 115 5 same same JJ cord-048471-7jszm1nd 115 6 conclusions conclusion NNS cord-048471-7jszm1nd 115 7 would would MD cord-048471-7jszm1nd 115 8 seem seem VB cord-048471-7jszm1nd 115 9 appropriate appropriate JJ cord-048471-7jszm1nd 115 10 for for IN cord-048471-7jszm1nd 115 11 the the DT cord-048471-7jszm1nd 115 12 JV JV NNP cord-048471-7jszm1nd 115 13 N N NNP cord-048471-7jszm1nd 115 14 - - HYPH cord-048471-7jszm1nd 115 15 term term NN cord-048471-7jszm1nd 115 16 . . . cord-048471-7jszm1nd 116 1 In in IN cord-048471-7jszm1nd 116 2 addition addition NN cord-048471-7jszm1nd 116 3 , , , cord-048471-7jszm1nd 116 4 it -PRON- PRP cord-048471-7jszm1nd 116 5 is be VBZ cord-048471-7jszm1nd 116 6 not not RB cord-048471-7jszm1nd 116 7 known know VBN cord-048471-7jszm1nd 116 8 why why WRB cord-048471-7jszm1nd 116 9 the the DT cord-048471-7jszm1nd 116 10 JV JV NNP cord-048471-7jszm1nd 116 11 N N NNP cord-048471-7jszm1nd 116 12 - - HYPH cord-048471-7jszm1nd 116 13 term term NN cord-048471-7jszm1nd 116 14 was be VBD cord-048471-7jszm1nd 116 15 previously previously RB cord-048471-7jszm1nd 116 16 not not RB cord-048471-7jszm1nd 116 17 detected detect VBN cord-048471-7jszm1nd 116 18 in in RP cord-048471-7jszm1nd 116 19 in in IN cord-048471-7jszm1nd 116 20 vitro vitro FW cord-048471-7jszm1nd 116 21 transcription transcription NN cord-048471-7jszm1nd 116 22 and and CC cord-048471-7jszm1nd 116 23 translation translation NN cord-048471-7jszm1nd 116 24 studies study NNS cord-048471-7jszm1nd 116 25 prior prior RB cord-048471-7jszm1nd 116 26 to to IN cord-048471-7jszm1nd 116 27 the the DT cord-048471-7jszm1nd 116 28 insertion insertion NN cord-048471-7jszm1nd 116 29 of of IN cord-048471-7jszm1nd 116 30 the the DT cord-048471-7jszm1nd 116 31 V5 V5 NNP cord-048471-7jszm1nd 116 32 epitope epitope NN cord-048471-7jszm1nd 116 33 . . . cord-048471-7jszm1nd 117 1 It -PRON- PRP cord-048471-7jszm1nd 117 2 can can MD cord-048471-7jszm1nd 117 3 not not RB cord-048471-7jszm1nd 117 4 be be VB cord-048471-7jszm1nd 117 5 ruled rule VBN cord-048471-7jszm1nd 117 6 out out RP cord-048471-7jszm1nd 117 7 , , , cord-048471-7jszm1nd 117 8 however however RB cord-048471-7jszm1nd 117 9 , , , cord-048471-7jszm1nd 117 10 that that IN cord-048471-7jszm1nd 117 11 the the DT cord-048471-7jszm1nd 117 12 wild wild JJ cord-048471-7jszm1nd 117 13 type type NN cord-048471-7jszm1nd 117 14 JV JV NNP cord-048471-7jszm1nd 117 15 N N NNP cord-048471-7jszm1nd 117 16 - - HYPH cord-048471-7jszm1nd 117 17 term term NN cord-048471-7jszm1nd 117 18 aberrantly aberrantly RB cord-048471-7jszm1nd 117 19 co co VBD cord-048471-7jszm1nd 117 20 - - VBZ cord-048471-7jszm1nd 117 21 migrates migrate VBZ cord-048471-7jszm1nd 117 22 with with IN cord-048471-7jszm1nd 117 23 the the DT cord-048471-7jszm1nd 117 24 39 39 CD cord-048471-7jszm1nd 117 25 kDa kDa NNP cord-048471-7jszm1nd 117 26 JV JV NNP cord-048471-7jszm1nd 117 27 2C 2c NN cord-048471-7jszm1nd 117 28 protein protein NN cord-048471-7jszm1nd 117 29 in in IN cord-048471-7jszm1nd 117 30 SDS SDS NNP cord-048471-7jszm1nd 117 31 - - HYPH cord-048471-7jszm1nd 117 32 PAGE PAGE NNP cord-048471-7jszm1nd 117 33 . . . cord-048471-7jszm1nd 118 1 Indeed indeed RB cord-048471-7jszm1nd 118 2 , , , cord-048471-7jszm1nd 118 3 the the DT cord-048471-7jszm1nd 118 4 appearance appearance NN cord-048471-7jszm1nd 118 5 of of IN cord-048471-7jszm1nd 118 6 the the DT cord-048471-7jszm1nd 118 7 V5/ V5/ NNP cord-048471-7jszm1nd 118 8 N N NNP cord-048471-7jszm1nd 118 9 - - HYPH cord-048471-7jszm1nd 118 10 term term NN cord-048471-7jszm1nd 118 11 product product NN cord-048471-7jszm1nd 118 12 from from IN cord-048471-7jszm1nd 118 13 transfected transfecte VBN cord-048471-7jszm1nd 118 14 cell cell NN cord-048471-7jszm1nd 118 15 lysates lysate NNS cord-048471-7jszm1nd 118 16 would would MD cord-048471-7jszm1nd 118 17 appear appear VB cord-048471-7jszm1nd 118 18 to to TO cord-048471-7jszm1nd 118 19 be be VB cord-048471-7jszm1nd 118 20 one one CD cord-048471-7jszm1nd 118 21 of of IN cord-048471-7jszm1nd 118 22 a a DT cord-048471-7jszm1nd 118 23 doublet doublet NN cord-048471-7jszm1nd 118 24 ( ( -LRB- cord-048471-7jszm1nd 118 25 Figure figure NN cord-048471-7jszm1nd 118 26 8) 8) NN cord-048471-7jszm1nd 118 27 , , , cord-048471-7jszm1nd 118 28 also also RB cord-048471-7jszm1nd 118 29 analogous analogous JJ cord-048471-7jszm1nd 118 30 to to IN cord-048471-7jszm1nd 118 31 the the DT cord-048471-7jszm1nd 118 32 observed observed JJ cord-048471-7jszm1nd 118 33 appearance appearance NN cord-048471-7jszm1nd 118 34 of of IN cord-048471-7jszm1nd 118 35 the the DT cord-048471-7jszm1nd 118 36 MNV MNV NNP cord-048471-7jszm1nd 118 37 N n CD cord-048471-7jszm1nd 118 38 - - HYPH cord-048471-7jszm1nd 118 39 term term NN cord-048471-7jszm1nd 118 40 protein protein NN cord-048471-7jszm1nd 118 41 in in IN cord-048471-7jszm1nd 118 42 infected infected JJ cord-048471-7jszm1nd 118 43 cells cell NNS cord-048471-7jszm1nd 118 44 , , , cord-048471-7jszm1nd 118 45 suggesting suggest VBG cord-048471-7jszm1nd 118 46 the the DT cord-048471-7jszm1nd 118 47 likelihood likelihood NN cord-048471-7jszm1nd 118 48 of of IN cord-048471-7jszm1nd 118 49 a a DT cord-048471-7jszm1nd 118 50 further further JJ cord-048471-7jszm1nd 118 51 cleavage cleavage NN cord-048471-7jszm1nd 118 52 site site NN cord-048471-7jszm1nd 118 53 within within IN cord-048471-7jszm1nd 118 54 the the DT cord-048471-7jszm1nd 118 55 JV JV NNP cord-048471-7jszm1nd 118 56 N N NNP cord-048471-7jszm1nd 118 57 - - HYPH cord-048471-7jszm1nd 118 58 term term NN cord-048471-7jszm1nd 118 59 protein protein NN cord-048471-7jszm1nd 118 60 which which WDT cord-048471-7jszm1nd 118 61 has have VBZ cord-048471-7jszm1nd 118 62 yet yet RB cord-048471-7jszm1nd 118 63 to to TO cord-048471-7jszm1nd 118 64 be be VB cord-048471-7jszm1nd 118 65 elucidated elucidate VBN cord-048471-7jszm1nd 118 66 . . . cord-048471-7jszm1nd 119 1 Nevertheless nevertheless RB cord-048471-7jszm1nd 119 2 , , , cord-048471-7jszm1nd 119 3 these these DT cord-048471-7jszm1nd 119 4 studies study NNS cord-048471-7jszm1nd 119 5 clearly clearly RB cord-048471-7jszm1nd 119 6 demonstrate demonstrate VBP cord-048471-7jszm1nd 119 7 that that IN cord-048471-7jszm1nd 119 8 a a DT cord-048471-7jszm1nd 119 9 protein protein NN cord-048471-7jszm1nd 119 10 representative representative NN cord-048471-7jszm1nd 119 11 of of IN cord-048471-7jszm1nd 119 12 the the DT cord-048471-7jszm1nd 119 13 59GS 59gs CD cord-048471-7jszm1nd 119 14 of of IN cord-048471-7jszm1nd 119 15 JV JV NNP cord-048471-7jszm1nd 119 16 is be VBZ cord-048471-7jszm1nd 119 17 translated translate VBN cord-048471-7jszm1nd 119 18 both both CC cord-048471-7jszm1nd 119 19 in in IN cord-048471-7jszm1nd 119 20 vitro vitro FW cord-048471-7jszm1nd 119 21 and and CC cord-048471-7jszm1nd 119 22 in in IN cord-048471-7jszm1nd 119 23 vivo vivo NN cord-048471-7jszm1nd 119 24 and and CC cord-048471-7jszm1nd 119 25 is be VBZ cord-048471-7jszm1nd 119 26 proteolytically proteolytically RB cord-048471-7jszm1nd 119 27 processed process VBN cord-048471-7jszm1nd 119 28 from from IN cord-048471-7jszm1nd 119 29 the the DT cord-048471-7jszm1nd 119 30 ORF1 ORF1 NNP cord-048471-7jszm1nd 119 31 polyprotein polyprotein NN cord-048471-7jszm1nd 119 32 following follow VBG cord-048471-7jszm1nd 119 33 translation translation NN cord-048471-7jszm1nd 119 34 initiation initiation NN cord-048471-7jszm1nd 119 35 at at IN cord-048471-7jszm1nd 119 36 nucleotide nucleotide JJ cord-048471-7jszm1nd 119 37 22 22 CD cord-048471-7jszm1nd 119 38 . . . cord-048471-7jszm1nd 120 1 Human human JJ cord-048471-7jszm1nd 120 2 norovirus norovirus NN cord-048471-7jszm1nd 120 3 infection infection NN cord-048471-7jszm1nd 120 4 has have VBZ cord-048471-7jszm1nd 120 5 been be VBN cord-048471-7jszm1nd 120 6 shown show VBN cord-048471-7jszm1nd 120 7 to to TO cord-048471-7jszm1nd 120 8 be be VB cord-048471-7jszm1nd 120 9 the the DT cord-048471-7jszm1nd 120 10 leading leading JJ cord-048471-7jszm1nd 120 11 cause cause NN cord-048471-7jszm1nd 120 12 of of IN cord-048471-7jszm1nd 120 13 non non JJ cord-048471-7jszm1nd 120 14 - - JJ cord-048471-7jszm1nd 120 15 bacterial bacterial JJ cord-048471-7jszm1nd 120 16 gastroenteritis gastroenteritis NN cord-048471-7jszm1nd 120 17 [ [ -LRB- cord-048471-7jszm1nd 120 18 31 31 CD cord-048471-7jszm1nd 120 19 ] ] -RRB- cord-048471-7jszm1nd 120 20 , , , cord-048471-7jszm1nd 120 21 however however WRB cord-048471-7jszm1nd 120 22 there there EX cord-048471-7jszm1nd 120 23 is be VBZ cord-048471-7jszm1nd 120 24 currently currently RB cord-048471-7jszm1nd 121 1 no no DT cord-048471-7jszm1nd 121 2 cell cell NN cord-048471-7jszm1nd 121 3 culture culture NN cord-048471-7jszm1nd 121 4 system system NN cord-048471-7jszm1nd 121 5 available available JJ cord-048471-7jszm1nd 121 6 to to TO cord-048471-7jszm1nd 121 7 facilitate facilitate VB cord-048471-7jszm1nd 121 8 viral viral JJ cord-048471-7jszm1nd 121 9 replication replication NN cord-048471-7jszm1nd 121 10 and and CC cord-048471-7jszm1nd 121 11 ethical ethical JJ cord-048471-7jszm1nd 121 12 considerations consideration NNS cord-048471-7jszm1nd 121 13 have have VBP cord-048471-7jszm1nd 121 14 hindered hinder VBN cord-048471-7jszm1nd 121 15 progress progress NN cord-048471-7jszm1nd 121 16 in in IN cord-048471-7jszm1nd 121 17 establishing establish VBG cord-048471-7jszm1nd 121 18 a a DT cord-048471-7jszm1nd 121 19 permissive permissive JJ cord-048471-7jszm1nd 121 20 human human JJ cord-048471-7jszm1nd 121 21 organ organ NN cord-048471-7jszm1nd 121 22 culture culture NN cord-048471-7jszm1nd 121 23 system system NN cord-048471-7jszm1nd 121 24 . . . cord-048471-7jszm1nd 122 1 The the DT cord-048471-7jszm1nd 122 2 study study NN cord-048471-7jszm1nd 122 3 of of IN cord-048471-7jszm1nd 122 4 Jena Jena NNP cord-048471-7jszm1nd 122 5 virus virus NN cord-048471-7jszm1nd 122 6 offers offer VBZ cord-048471-7jszm1nd 122 7 a a DT cord-048471-7jszm1nd 122 8 potential potential JJ cord-048471-7jszm1nd 122 9 animal animal NN cord-048471-7jszm1nd 122 10 model model NN cord-048471-7jszm1nd 122 11 of of IN cord-048471-7jszm1nd 122 12 enteric enteric JJ cord-048471-7jszm1nd 122 13 noroviral noroviral JJ cord-048471-7jszm1nd 122 14 infection infection NN cord-048471-7jszm1nd 122 15 . . . cord-048471-7jszm1nd 123 1 However however RB cord-048471-7jszm1nd 123 2 , , , cord-048471-7jszm1nd 123 3 until until IN cord-048471-7jszm1nd 123 4 a a DT cord-048471-7jszm1nd 123 5 permissive permissive JJ cord-048471-7jszm1nd 123 6 bovine bovine JJ cord-048471-7jszm1nd 123 7 cell cell NN cord-048471-7jszm1nd 123 8 and/or and/or CC cord-048471-7jszm1nd 123 9 organ organ NN cord-048471-7jszm1nd 123 10 culture culture NN cord-048471-7jszm1nd 123 11 systems system NNS cord-048471-7jszm1nd 123 12 is be VBZ cord-048471-7jszm1nd 123 13 established establish VBN cord-048471-7jszm1nd 123 14 analysis analysis NN cord-048471-7jszm1nd 123 15 of of IN cord-048471-7jszm1nd 123 16 the the DT cord-048471-7jszm1nd 123 17 molecular molecular JJ cord-048471-7jszm1nd 123 18 mechanisms mechanism NNS cord-048471-7jszm1nd 123 19 underpinning underpin VBG cord-048471-7jszm1nd 123 20 viral viral JJ cord-048471-7jszm1nd 123 21 replication replication NN cord-048471-7jszm1nd 123 22 and and CC cord-048471-7jszm1nd 123 23 pathogenesis pathogenesis NN cord-048471-7jszm1nd 123 24 rely rely VBP cord-048471-7jszm1nd 123 25 upon upon IN cord-048471-7jszm1nd 123 26 in in FW cord-048471-7jszm1nd 123 27 vitro vitro FW cord-048471-7jszm1nd 123 28 systems system NNS cord-048471-7jszm1nd 123 29 , , , cord-048471-7jszm1nd 123 30 most most RBS cord-048471-7jszm1nd 123 31 notably notably RB cord-048471-7jszm1nd 123 32 polyprotein polyprotein JJ cord-048471-7jszm1nd 123 33 synthesis synthesis NN cord-048471-7jszm1nd 123 34 and and CC cord-048471-7jszm1nd 123 35 processing processing NN cord-048471-7jszm1nd 123 36 . . . cord-048471-7jszm1nd 124 1 Unlike unlike IN cord-048471-7jszm1nd 124 2 similarly similarly RB cord-048471-7jszm1nd 124 3 studied study VBN cord-048471-7jszm1nd 124 4 human human JJ cord-048471-7jszm1nd 124 5 noroviruses noroviruse NNS cord-048471-7jszm1nd 124 6 JV JV NNP cord-048471-7jszm1nd 124 7 initially initially RB cord-048471-7jszm1nd 124 8 did do VBD cord-048471-7jszm1nd 124 9 not not RB cord-048471-7jszm1nd 124 10 appear appear VB cord-048471-7jszm1nd 124 11 to to TO cord-048471-7jszm1nd 124 12 express express VB cord-048471-7jszm1nd 124 13 the the DT cord-048471-7jszm1nd 124 14 N n CD cord-048471-7jszm1nd 124 15 - - HYPH cord-048471-7jszm1nd 124 16 terminal terminal NN cord-048471-7jszm1nd 124 17 protein protein NN cord-048471-7jszm1nd 124 18 , , , cord-048471-7jszm1nd 124 19 presenting present VBG cord-048471-7jszm1nd 124 20 the the DT cord-048471-7jszm1nd 124 21 possibility possibility NN cord-048471-7jszm1nd 124 22 that that IN cord-048471-7jszm1nd 124 23 the the DT cord-048471-7jszm1nd 124 24 encoding encoding NN cord-048471-7jszm1nd 124 25 RNA RNA NNP cord-048471-7jszm1nd 124 26 sequence sequence NN cord-048471-7jszm1nd 124 27 had have VBD cord-048471-7jszm1nd 124 28 a a DT cord-048471-7jszm1nd 124 29 regulatory regulatory JJ cord-048471-7jszm1nd 124 30 function function NN cord-048471-7jszm1nd 124 31 itself -PRON- PRP cord-048471-7jszm1nd 124 32 , , , cord-048471-7jszm1nd 124 33 most most RBS cord-048471-7jszm1nd 124 34 likely likely RB cord-048471-7jszm1nd 124 35 involved involve VBN cord-048471-7jszm1nd 124 36 in in IN cord-048471-7jszm1nd 124 37 translation translation NN cord-048471-7jszm1nd 124 38 initiation initiation NN cord-048471-7jszm1nd 124 39 in in IN cord-048471-7jszm1nd 124 40 an an DT cord-048471-7jszm1nd 124 41 IRES IRES NNP cord-048471-7jszm1nd 124 42 - - HYPH cord-048471-7jszm1nd 124 43 like like JJ cord-048471-7jszm1nd 124 44 manner manner NN cord-048471-7jszm1nd 124 45 . . . cord-048471-7jszm1nd 125 1 This this DT cord-048471-7jszm1nd 125 2 was be VBD cord-048471-7jszm1nd 125 3 shown show VBN cord-048471-7jszm1nd 125 4 not not RB cord-048471-7jszm1nd 125 5 to to TO cord-048471-7jszm1nd 125 6 be be VB cord-048471-7jszm1nd 125 7 the the DT cord-048471-7jszm1nd 125 8 case case NN cord-048471-7jszm1nd 125 9 and and CC cord-048471-7jszm1nd 125 10 , , , cord-048471-7jszm1nd 125 11 following follow VBG cord-048471-7jszm1nd 125 12 determination determination NN cord-048471-7jszm1nd 125 13 of of IN cord-048471-7jszm1nd 125 14 the the DT cord-048471-7jszm1nd 125 15 site site NN cord-048471-7jszm1nd 125 16 of of IN cord-048471-7jszm1nd 125 17 translation translation NN cord-048471-7jszm1nd 125 18 initiation initiation NN cord-048471-7jszm1nd 125 19 at at IN cord-048471-7jszm1nd 125 20 the the DT cord-048471-7jszm1nd 125 21 predicted predict VBN cord-048471-7jszm1nd 125 22 nucleotide nucleotide JJ cord-048471-7jszm1nd 125 23 22 22 CD cord-048471-7jszm1nd 125 24 the the DT cord-048471-7jszm1nd 125 25 N n CD cord-048471-7jszm1nd 125 26 - - HYPH cord-048471-7jszm1nd 125 27 term term NN cord-048471-7jszm1nd 125 28 protein protein NN cord-048471-7jszm1nd 125 29 was be VBD cord-048471-7jszm1nd 125 30 detected detect VBN cord-048471-7jszm1nd 125 31 following follow VBG cord-048471-7jszm1nd 125 32 the the DT cord-048471-7jszm1nd 125 33 insertion insertion NN cord-048471-7jszm1nd 125 34 of of IN cord-048471-7jszm1nd 125 35 an an DT cord-048471-7jszm1nd 125 36 epitope epitope NN cord-048471-7jszm1nd 125 37 tag tag NN cord-048471-7jszm1nd 125 38 , , , cord-048471-7jszm1nd 125 39 both both CC cord-048471-7jszm1nd 125 40 in in IN cord-048471-7jszm1nd 125 41 vitro vitro FW cord-048471-7jszm1nd 125 42 and and CC cord-048471-7jszm1nd 125 43 in in IN cord-048471-7jszm1nd 125 44 vivo vivo NNP cord-048471-7jszm1nd 125 45 . . . cord-048471-7jszm1nd 126 1 Although although IN cord-048471-7jszm1nd 126 2 slightly slightly RB cord-048471-7jszm1nd 126 3 larger large JJR cord-048471-7jszm1nd 126 4 than than IN cord-048471-7jszm1nd 126 5 predicted predict VBD cord-048471-7jszm1nd 126 6 the the DT cord-048471-7jszm1nd 126 7 N n CD cord-048471-7jszm1nd 126 8 - - HYPH cord-048471-7jszm1nd 126 9 term term NN cord-048471-7jszm1nd 126 10 protein protein NN cord-048471-7jszm1nd 126 11 was be VBD cord-048471-7jszm1nd 126 12 detected detect VBN cord-048471-7jszm1nd 126 13 in in IN cord-048471-7jszm1nd 126 14 a a DT cord-048471-7jszm1nd 126 15 processed process VBN cord-048471-7jszm1nd 126 16 form form NN cord-048471-7jszm1nd 126 17 in in IN cord-048471-7jszm1nd 126 18 vivo vivo NN cord-048471-7jszm1nd 126 19 , , , cord-048471-7jszm1nd 126 20 thus thus RB cord-048471-7jszm1nd 126 21 not not RB cord-048471-7jszm1nd 126 22 only only RB cord-048471-7jszm1nd 126 23 demonstrating demonstrate VBG cord-048471-7jszm1nd 126 24 initial initial JJ cord-048471-7jszm1nd 126 25 translation translation NN cord-048471-7jszm1nd 126 26 of of IN cord-048471-7jszm1nd 126 27 the the DT cord-048471-7jszm1nd 126 28 ORF1 ORF1 NNP cord-048471-7jszm1nd 126 29 polyprotein polyprotein NN cord-048471-7jszm1nd 126 30 but but CC cord-048471-7jszm1nd 126 31 also also RB cord-048471-7jszm1nd 126 32 activity activity NN cord-048471-7jszm1nd 126 33 of of IN cord-048471-7jszm1nd 126 34 the the DT cord-048471-7jszm1nd 126 35 viral viral JJ cord-048471-7jszm1nd 126 36 encoded encode VBN cord-048471-7jszm1nd 126 37 protease protease NN cord-048471-7jszm1nd 126 38 . . . cord-048471-7jszm1nd 127 1 These these DT cord-048471-7jszm1nd 127 2 important important JJ cord-048471-7jszm1nd 127 3 findings finding NNS cord-048471-7jszm1nd 127 4 indicate indicate VBP cord-048471-7jszm1nd 127 5 that that IN cord-048471-7jszm1nd 127 6 the the DT cord-048471-7jszm1nd 127 7 block block NN cord-048471-7jszm1nd 127 8 to to IN cord-048471-7jszm1nd 127 9 replication replication NN cord-048471-7jszm1nd 127 10 of of IN cord-048471-7jszm1nd 127 11 enteric enteric JJ cord-048471-7jszm1nd 127 12 norovirus norovirus NN cord-048471-7jszm1nd 127 13 in in IN cord-048471-7jszm1nd 127 14 cultured cultured JJ cord-048471-7jszm1nd 127 15 cells cell NNS cord-048471-7jszm1nd 127 16 can can MD cord-048471-7jszm1nd 127 17 not not RB cord-048471-7jszm1nd 127 18 be be VB cord-048471-7jszm1nd 127 19 attributed attribute VBN cord-048471-7jszm1nd 127 20 to to IN cord-048471-7jszm1nd 127 21 a a DT cord-048471-7jszm1nd 127 22 failure failure NN cord-048471-7jszm1nd 127 23 to to TO cord-048471-7jszm1nd 127 24 synthesise synthesise VB cord-048471-7jszm1nd 127 25 and and CC cord-048471-7jszm1nd 127 26 process process VB cord-048471-7jszm1nd 127 27 the the DT cord-048471-7jszm1nd 127 28 non non JJ cord-048471-7jszm1nd 127 29 - - JJ cord-048471-7jszm1nd 127 30 structural structural JJ cord-048471-7jszm1nd 127 31 proteins protein NNS cord-048471-7jszm1nd 127 32 . . . cord-048471-7jszm1nd 128 1 The the DT cord-048471-7jszm1nd 128 2 detection detection NN cord-048471-7jszm1nd 128 3 of of IN cord-048471-7jszm1nd 128 4 processed process VBN cord-048471-7jszm1nd 128 5 and and CC cord-048471-7jszm1nd 128 6 active active JJ cord-048471-7jszm1nd 128 7 ORF1 ORF1 NNP cord-048471-7jszm1nd 128 8 proteins protein NNS cord-048471-7jszm1nd 128 9 in in IN cord-048471-7jszm1nd 128 10 transfected transfecte VBN cord-048471-7jszm1nd 128 11 cultured cultured JJ cord-048471-7jszm1nd 128 12 cells cell NNS cord-048471-7jszm1nd 128 13 , , , cord-048471-7jszm1nd 128 14 however however RB cord-048471-7jszm1nd 128 15 , , , cord-048471-7jszm1nd 128 16 highlights highlight VBZ cord-048471-7jszm1nd 128 17 the the DT cord-048471-7jszm1nd 128 18 potential potential NN cord-048471-7jszm1nd 128 19 for for IN cord-048471-7jszm1nd 128 20 the the DT cord-048471-7jszm1nd 128 21 development development NN cord-048471-7jszm1nd 128 22 of of IN cord-048471-7jszm1nd 128 23 cell cell NN cord-048471-7jszm1nd 128 24 and and CC cord-048471-7jszm1nd 128 25 bovine bovine JJ cord-048471-7jszm1nd 128 26 organ organ NN cord-048471-7jszm1nd 128 27 based base VBN cord-048471-7jszm1nd 128 28 systems system NNS cord-048471-7jszm1nd 128 29 to to TO cord-048471-7jszm1nd 128 30 facilitate facilitate VB cord-048471-7jszm1nd 128 31 the the DT cord-048471-7jszm1nd 128 32 replication replication NN cord-048471-7jszm1nd 128 33 of of IN cord-048471-7jszm1nd 128 34 Jena Jena NNP cord-048471-7jszm1nd 128 35 virus virus NN cord-048471-7jszm1nd 128 36 . . . cord-048471-7jszm1nd 129 1 The the DT cord-048471-7jszm1nd 129 2 pEGFP pEGFP NNP cord-048471-7jszm1nd 129 3 - - HYPH cord-048471-7jszm1nd 129 4 C1 c1 NN cord-048471-7jszm1nd 129 5 vector vector NN cord-048471-7jszm1nd 129 6 ( ( -LRB- cord-048471-7jszm1nd 129 7 Clontech Clontech NNP cord-048471-7jszm1nd 129 8 ) ) -RRB- cord-048471-7jszm1nd 129 9 comprises comprise VBZ cord-048471-7jszm1nd 129 10 of of IN cord-048471-7jszm1nd 129 11 an an DT cord-048471-7jszm1nd 129 12 EGFP EGFP NNP cord-048471-7jszm1nd 129 13 coding coding NN cord-048471-7jszm1nd 129 14 sequence sequence NN cord-048471-7jszm1nd 129 15 under under IN cord-048471-7jszm1nd 129 16 the the DT cord-048471-7jszm1nd 129 17 control control NN cord-048471-7jszm1nd 129 18 of of IN cord-048471-7jszm1nd 129 19 a a DT cord-048471-7jszm1nd 129 20 CMV CMV NNP cord-048471-7jszm1nd 129 21 promoter promoter NN cord-048471-7jszm1nd 129 22 and and CC cord-048471-7jszm1nd 129 23 a a DT cord-048471-7jszm1nd 129 24 Kozak Kozak NNP cord-048471-7jszm1nd 129 25 translation translation NN cord-048471-7jszm1nd 129 26 initiation initiation NN cord-048471-7jszm1nd 129 27 site site NN cord-048471-7jszm1nd 129 28 . . . cord-048471-7jszm1nd 130 1 Downstream downstream IN cord-048471-7jszm1nd 130 2 of of IN cord-048471-7jszm1nd 130 3 the the DT cord-048471-7jszm1nd 130 4 EGFP EGFP NNP cord-048471-7jszm1nd 130 5 sequence sequence NN cord-048471-7jszm1nd 130 6 is be VBZ cord-048471-7jszm1nd 130 7 the the DT cord-048471-7jszm1nd 130 8 multiple multiple JJ cord-048471-7jszm1nd 130 9 cloning cloning NN cord-048471-7jszm1nd 130 10 site site NN cord-048471-7jszm1nd 130 11 containing contain VBG cord-048471-7jszm1nd 130 12 unique unique JJ cord-048471-7jszm1nd 130 13 BglII bglii NN cord-048471-7jszm1nd 130 14 , , , cord-048471-7jszm1nd 130 15 SacI SacI NNP cord-048471-7jszm1nd 130 16 , , , cord-048471-7jszm1nd 130 17 HindIII HindIII NNP cord-048471-7jszm1nd 130 18 and and CC cord-048471-7jszm1nd 130 19 ApaI ApaI NNP cord-048471-7jszm1nd 130 20 restriction restriction NN cord-048471-7jszm1nd 130 21 sites site NNS cord-048471-7jszm1nd 130 22 . . . cord-048471-7jszm1nd 131 1 Contruction Contruction NNP cord-048471-7jszm1nd 131 2 of of IN cord-048471-7jszm1nd 131 3 pEGFP pEGFP NNP cord-048471-7jszm1nd 131 4 - - HYPH cord-048471-7jszm1nd 131 5 C1 C1 NNP cord-048471-7jszm1nd 131 6 / / SYM cord-048471-7jszm1nd 131 7 JV JV NNP cord-048471-7jszm1nd 131 8 59 59 CD cord-048471-7jszm1nd 131 9 GS GS NNP cord-048471-7jszm1nd 131 10 / / SYM cord-048471-7jszm1nd 131 11 lacZ lacZ NNP cord-048471-7jszm1nd 131 12 was be VBD cord-048471-7jszm1nd 131 13 as as IN cord-048471-7jszm1nd 131 14 follows follow VBZ cord-048471-7jszm1nd 131 15 ; ; : cord-048471-7jszm1nd 131 16 The the DT cord-048471-7jszm1nd 131 17 JV JV NNP cord-048471-7jszm1nd 131 18 59 59 CD cord-048471-7jszm1nd 131 19 GS GS NNP cord-048471-7jszm1nd 131 20 sequence sequence NN cord-048471-7jszm1nd 131 21 was be VBD cord-048471-7jszm1nd 131 22 amplified amplify VBN cord-048471-7jszm1nd 131 23 from from IN cord-048471-7jszm1nd 131 24 the the DT cord-048471-7jszm1nd 131 25 JV JV NNP cord-048471-7jszm1nd 131 26 full full JJ cord-048471-7jszm1nd 131 27 length length NN cord-048471-7jszm1nd 131 28 cDNA cdna NN cord-048471-7jszm1nd 131 29 clone clone NN cord-048471-7jszm1nd 131 30 [ [ -LRB- cord-048471-7jszm1nd 131 31 7 7 CD cord-048471-7jszm1nd 131 32 ] ] -RRB- cord-048471-7jszm1nd 131 33 using use VBG cord-048471-7jszm1nd 131 34 Bio Bio NNP cord-048471-7jszm1nd 131 35 - - HYPH cord-048471-7jszm1nd 131 36 X X NNP cord-048471-7jszm1nd 131 37 - - HYPH cord-048471-7jszm1nd 131 38 Act act NN cord-048471-7jszm1nd 131 39 DNA dna NN cord-048471-7jszm1nd 131 40 polymerase polymerase NN cord-048471-7jszm1nd 131 41 ( ( -LRB- cord-048471-7jszm1nd 131 42 Bioline Bioline NNP cord-048471-7jszm1nd 131 43 ) ) -RRB- cord-048471-7jszm1nd 131 44 with with IN cord-048471-7jszm1nd 131 45 the the DT cord-048471-7jszm1nd 131 46 primers primer NNS cord-048471-7jszm1nd 131 47 59 59 CD cord-048471-7jszm1nd 131 48 GS GS NNP cord-048471-7jszm1nd 131 49 F F NNP cord-048471-7jszm1nd 131 50 ( ( -LRB- cord-048471-7jszm1nd 131 51 59-AACTGCA 59-aactgca CD cord-048471-7jszm1nd 131 52 - - HYPH cord-048471-7jszm1nd 131 53 GATCTTAATAAGTGAATGAAGACTTTGACGAT-39 gatcttaataagtgaatgaagactttgacgat-39 NN cord-048471-7jszm1nd 131 54 ) ) -RRB- cord-048471-7jszm1nd 131 55 , , , cord-048471-7jszm1nd 131 56 containing contain VBG cord-048471-7jszm1nd 131 57 the the DT cord-048471-7jszm1nd 131 58 BglII BglII NNP cord-048471-7jszm1nd 131 59 restriction restriction NN cord-048471-7jszm1nd 131 60 site site NN cord-048471-7jszm1nd 131 61 ( ( -LRB- cord-048471-7jszm1nd 131 62 bold bold JJ cord-048471-7jszm1nd 131 63 ) ) -RRB- cord-048471-7jszm1nd 131 64 and and CC cord-048471-7jszm1nd 131 65 two two CD cord-048471-7jszm1nd 131 66 in in IN cord-048471-7jszm1nd 131 67 - - HYPH cord-048471-7jszm1nd 131 68 frame frame NN cord-048471-7jszm1nd 131 69 translation translation NN cord-048471-7jszm1nd 131 70 termination termination NN cord-048471-7jszm1nd 131 71 codons codon NNS cord-048471-7jszm1nd 131 72 ( ( -LRB- cord-048471-7jszm1nd 131 73 underlined underline VBN cord-048471-7jszm1nd 131 74 ) ) -RRB- cord-048471-7jszm1nd 131 75 to to TO cord-048471-7jszm1nd 131 76 ensure ensure VB cord-048471-7jszm1nd 131 77 that that DT cord-048471-7jszm1nd 131 78 translation translation NN cord-048471-7jszm1nd 131 79 of of IN cord-048471-7jszm1nd 131 80 the the DT cord-048471-7jszm1nd 131 81 EGFP EGFP NNP cord-048471-7jszm1nd 131 82 sequence sequence NN cord-048471-7jszm1nd 131 83 did do VBD cord-048471-7jszm1nd 131 84 not not RB cord-048471-7jszm1nd 131 85 carry carry VB cord-048471-7jszm1nd 131 86 over over RP cord-048471-7jszm1nd 131 87 to to IN cord-048471-7jszm1nd 131 88 the the DT cord-048471-7jszm1nd 131 89 59 59 CD cord-048471-7jszm1nd 131 90 GS GS NNP cord-048471-7jszm1nd 131 91 , , , cord-048471-7jszm1nd 131 92 and and CC cord-048471-7jszm1nd 131 93 59 59 CD cord-048471-7jszm1nd 131 94 GS gs NN cord-048471-7jszm1nd 131 95 R r NN cord-048471-7jszm1nd 131 96 ( ( -LRB- cord-048471-7jszm1nd 131 97 59-AACTGCAAGCTTCTGCAGGACACAATGAGG-39 59-AACTGCAAGCTTCTGCAGGACACAATGAGG-39 NNP cord-048471-7jszm1nd 131 98 ) ) -RRB- cord-048471-7jszm1nd 131 99 , , , cord-048471-7jszm1nd 131 100 containing contain VBG cord-048471-7jszm1nd 131 101 theHindIII thehindiii CD cord-048471-7jszm1nd 131 102 restriction restriction NN cord-048471-7jszm1nd 131 103 site site NN cord-048471-7jszm1nd 131 104 . . . cord-048471-7jszm1nd 132 1 The the DT cord-048471-7jszm1nd 132 2 JV JV NNP cord-048471-7jszm1nd 132 3 59 59 CD cord-048471-7jszm1nd 132 4 GS GS NNP cord-048471-7jszm1nd 132 5 amplicon amplicon NN cord-048471-7jszm1nd 132 6 was be VBD cord-048471-7jszm1nd 132 7 ligated ligate VBN cord-048471-7jszm1nd 132 8 to to IN cord-048471-7jszm1nd 132 9 the the DT cord-048471-7jszm1nd 132 10 pEGFP pEGFP NNP cord-048471-7jszm1nd 132 11 - - HYPH cord-048471-7jszm1nd 132 12 C1 c1 NN cord-048471-7jszm1nd 132 13 vector vector NN cord-048471-7jszm1nd 132 14 , , , cord-048471-7jszm1nd 132 15 following follow VBG cord-048471-7jszm1nd 132 16 restriction restriction NN cord-048471-7jszm1nd 132 17 enzyme enzyme NN cord-048471-7jszm1nd 132 18 digestion digestion NN cord-048471-7jszm1nd 132 19 of of IN cord-048471-7jszm1nd 132 20 both both DT cord-048471-7jszm1nd 132 21 amplicon amplicon NN cord-048471-7jszm1nd 132 22 and and CC cord-048471-7jszm1nd 132 23 vector vector NN cord-048471-7jszm1nd 132 24 with with IN cord-048471-7jszm1nd 132 25 BglII bglii NN cord-048471-7jszm1nd 132 26 and and CC cord-048471-7jszm1nd 132 27 HindIII hindiii NN cord-048471-7jszm1nd 132 28 restriction restriction NN cord-048471-7jszm1nd 132 29 enzymes enzyme NNS cord-048471-7jszm1nd 132 30 , , , cord-048471-7jszm1nd 132 31 and and CC cord-048471-7jszm1nd 132 32 the the DT cord-048471-7jszm1nd 132 33 ligated ligate VBN cord-048471-7jszm1nd 132 34 DNA dna NN cord-048471-7jszm1nd 132 35 used use VBN cord-048471-7jszm1nd 132 36 to to TO cord-048471-7jszm1nd 132 37 transform transform VB cord-048471-7jszm1nd 132 38 E.coli e.coli JJ cord-048471-7jszm1nd 132 39 Top10 Top10 NNP cord-048471-7jszm1nd 132 40 ( ( -LRB- cord-048471-7jszm1nd 132 41 Invitrogen Invitrogen NNP cord-048471-7jszm1nd 132 42 ) ) -RRB- cord-048471-7jszm1nd 132 43 . . . cord-048471-7jszm1nd 133 1 This this DT cord-048471-7jszm1nd 133 2 intermediate intermediate JJ cord-048471-7jszm1nd 133 3 construct construct NN cord-048471-7jszm1nd 133 4 was be VBD cord-048471-7jszm1nd 133 5 named name VBN cord-048471-7jszm1nd 133 6 pEGFP pEGFP NNP cord-048471-7jszm1nd 133 7 - - HYPH cord-048471-7jszm1nd 133 8 C1/ C1/ NNP cord-048471-7jszm1nd 133 9 JV JV NNP cord-048471-7jszm1nd 133 10 59 59 CD cord-048471-7jszm1nd 133 11 GS GS NNP cord-048471-7jszm1nd 133 12 . . . cord-048471-7jszm1nd 134 1 The the DT cord-048471-7jszm1nd 134 2 lacZ lacZ NNP cord-048471-7jszm1nd 134 3 coding code VBG cord-048471-7jszm1nd 134 4 sequence sequence NN cord-048471-7jszm1nd 134 5 was be VBD cord-048471-7jszm1nd 134 6 amplified amplify VBN cord-048471-7jszm1nd 134 7 from from IN cord-048471-7jszm1nd 134 8 the the DT cord-048471-7jszm1nd 134 9 pSVb psvb JJ cord-048471-7jszm1nd 134 10 - - HYPH cord-048471-7jszm1nd 134 11 Gal Gal NNP cord-048471-7jszm1nd 134 12 reporter reporter NN cord-048471-7jszm1nd 134 13 vector vector NN cord-048471-7jszm1nd 134 14 ( ( -LRB- cord-048471-7jszm1nd 134 15 Promega Promega NNP cord-048471-7jszm1nd 134 16 ) ) -RRB- cord-048471-7jszm1nd 134 17 using use VBG cord-048471-7jszm1nd 134 18 Bio Bio NNP cord-048471-7jszm1nd 134 19 - - HYPH cord-048471-7jszm1nd 134 20 X X NNP cord-048471-7jszm1nd 134 21 - - HYPH cord-048471-7jszm1nd 134 22 Act act NN cord-048471-7jszm1nd 134 23 DNA dna NN cord-048471-7jszm1nd 134 24 polymerase polymerase NN cord-048471-7jszm1nd 134 25 and and CC cord-048471-7jszm1nd 134 26 the the DT cord-048471-7jszm1nd 134 27 primers primer NNS cord-048471-7jszm1nd 134 28 lacZ lacz XX cord-048471-7jszm1nd 135 1 F F NNP cord-048471-7jszm1nd 135 2 ( ( -LRB- cord-048471-7jszm1nd 135 3 59-AACTGCAAGCTTGA 59-AACTGCAAGCTTGA NNP cord-048471-7jszm1nd 135 4 - - HYPH cord-048471-7jszm1nd 135 5 TATGGGGGATCCCGTCGTTTTACAACG-39 tatgggggatcccgtcgttttacaacg-39 CD cord-048471-7jszm1nd 135 6 ) ) -RRB- cord-048471-7jszm1nd 135 7 , , , cord-048471-7jszm1nd 135 8 containing contain VBG cord-048471-7jszm1nd 135 9 the the DT cord-048471-7jszm1nd 135 10 HindIII HindIII NNP cord-048471-7jszm1nd 135 11 restriction restriction NN cord-048471-7jszm1nd 135 12 site site NN cord-048471-7jszm1nd 135 13 ( ( -LRB- cord-048471-7jszm1nd 135 14 bold bold JJ cord-048471-7jszm1nd 135 15 ) ) -RRB- cord-048471-7jszm1nd 135 16 and and CC cord-048471-7jszm1nd 135 17 a a DT cord-048471-7jszm1nd 135 18 kozak kozak NNP cord-048471-7jszm1nd 135 19 translation translation NN cord-048471-7jszm1nd 135 20 initiation initiation NN cord-048471-7jszm1nd 135 21 site site NN cord-048471-7jszm1nd 135 22 ( ( -LRB- cord-048471-7jszm1nd 135 23 underlined underline VBN cord-048471-7jszm1nd 135 24 ) ) -RRB- cord-048471-7jszm1nd 135 25 , , , cord-048471-7jszm1nd 135 26 and and CC cord-048471-7jszm1nd 135 27 lacZ lacZ NNP cord-048471-7jszm1nd 135 28 R r NN cord-048471-7jszm1nd 135 29 ( ( -LRB- cord-048471-7jszm1nd 135 30 59-AACTGCGGGCCCTTAT 59-aactgcgggcccttat CD cord-048471-7jszm1nd 135 31 - - HYPH cord-048471-7jszm1nd 135 32 TATTTTTGACACCAGACCA-39 tatttttgacaccagacca-39 NN cord-048471-7jszm1nd 135 33 ) ) -RRB- cord-048471-7jszm1nd 135 34 containing contain VBG cord-048471-7jszm1nd 135 35 the the DT cord-048471-7jszm1nd 135 36 ApaI ApaI NNP cord-048471-7jszm1nd 135 37 restriction restriction NN cord-048471-7jszm1nd 135 38 site site NN cord-048471-7jszm1nd 135 39 ( ( -LRB- cord-048471-7jszm1nd 135 40 bold bold JJ cord-048471-7jszm1nd 135 41 ) ) -RRB- cord-048471-7jszm1nd 135 42 and and CC cord-048471-7jszm1nd 135 43 translation translation NN cord-048471-7jszm1nd 135 44 termination termination NN cord-048471-7jszm1nd 135 45 codons codon NNS cord-048471-7jszm1nd 135 46 ( ( -LRB- cord-048471-7jszm1nd 135 47 underlined underline VBN cord-048471-7jszm1nd 135 48 ) ) -RRB- cord-048471-7jszm1nd 135 49 . . . cord-048471-7jszm1nd 136 1 The the DT cord-048471-7jszm1nd 136 2 lacZ lacZ NNP cord-048471-7jszm1nd 136 3 amplicon amplicon NN cord-048471-7jszm1nd 136 4 was be VBD cord-048471-7jszm1nd 136 5 ligated ligate VBN cord-048471-7jszm1nd 136 6 to to IN cord-048471-7jszm1nd 136 7 the the DT cord-048471-7jszm1nd 136 8 pEGFP pEGFP NNP cord-048471-7jszm1nd 136 9 - - HYPH cord-048471-7jszm1nd 136 10 C1 C1 NNP cord-048471-7jszm1nd 136 11 / / SYM cord-048471-7jszm1nd 136 12 JV JV NNP cord-048471-7jszm1nd 136 13 59 59 CD cord-048471-7jszm1nd 136 14 GS GS NNP cord-048471-7jszm1nd 136 15 vector vector NN cord-048471-7jszm1nd 136 16 following follow VBG cord-048471-7jszm1nd 136 17 restriction restriction NN cord-048471-7jszm1nd 136 18 enzyme enzyme NN cord-048471-7jszm1nd 136 19 digest digest NN cord-048471-7jszm1nd 136 20 of of IN cord-048471-7jszm1nd 136 21 both both DT cord-048471-7jszm1nd 136 22 amplicon amplicon NN cord-048471-7jszm1nd 136 23 and and CC cord-048471-7jszm1nd 136 24 vector vector NN cord-048471-7jszm1nd 136 25 with with IN cord-048471-7jszm1nd 136 26 HindIII HindIII NNS cord-048471-7jszm1nd 136 27 and and CC cord-048471-7jszm1nd 136 28 ApaI ApaI NNP cord-048471-7jszm1nd 136 29 restriction restriction NN cord-048471-7jszm1nd 136 30 enzymes enzyme NNS cord-048471-7jszm1nd 136 31 , , , cord-048471-7jszm1nd 136 32 and and CC cord-048471-7jszm1nd 136 33 the the DT cord-048471-7jszm1nd 136 34 ligated ligate VBN cord-048471-7jszm1nd 136 35 DNA dna NN cord-048471-7jszm1nd 136 36 used use VBN cord-048471-7jszm1nd 136 37 to to TO cord-048471-7jszm1nd 136 38 transform transform VB cord-048471-7jszm1nd 136 39 E.coli E.coli NNS cord-048471-7jszm1nd 136 40 Top10 Top10 NNP cord-048471-7jszm1nd 136 41 . . . cord-048471-7jszm1nd 137 1 The the DT cord-048471-7jszm1nd 137 2 construct construct NN cord-048471-7jszm1nd 137 3 was be VBD cord-048471-7jszm1nd 137 4 verified verify VBN cord-048471-7jszm1nd 137 5 by by IN cord-048471-7jszm1nd 137 6 sequencing sequence VBG cord-048471-7jszm1nd 137 7 . . . cord-048471-7jszm1nd 138 1 Construction construction NN cord-048471-7jszm1nd 138 2 of of IN cord-048471-7jszm1nd 138 3 pEGFP pEGFP NNP cord-048471-7jszm1nd 138 4 - - HYPH cord-048471-7jszm1nd 138 5 C1 C1 NNP cord-048471-7jszm1nd 138 6 / / SYM cord-048471-7jszm1nd 138 7 IRES IRES NNP cord-048471-7jszm1nd 138 8 / / SYM cord-048471-7jszm1nd 138 9 lacZ lacZ NNP cord-048471-7jszm1nd 138 10 was be VBD cord-048471-7jszm1nd 138 11 as as IN cord-048471-7jszm1nd 138 12 follows follow VBZ cord-048471-7jszm1nd 138 13 ; ; : cord-048471-7jszm1nd 138 14 The the DT cord-048471-7jszm1nd 138 15 EMCV EMCV NNP cord-048471-7jszm1nd 138 16 IRES IRES NNP cord-048471-7jszm1nd 138 17 sequence sequence NN cord-048471-7jszm1nd 138 18 was be VBD cord-048471-7jszm1nd 138 19 amplified amplify VBN cord-048471-7jszm1nd 138 20 from from IN cord-048471-7jszm1nd 138 21 the the DT cord-048471-7jszm1nd 138 22 pIRES2-EGFP pires2-egfp CD cord-048471-7jszm1nd 138 23 vector vector NN cord-048471-7jszm1nd 138 24 ( ( -LRB- cord-048471-7jszm1nd 138 25 Clontech Clontech NNP cord-048471-7jszm1nd 138 26 ) ) -RRB- cord-048471-7jszm1nd 138 27 using use VBG cord-048471-7jszm1nd 138 28 Bio Bio NNP cord-048471-7jszm1nd 138 29 - - HYPH cord-048471-7jszm1nd 138 30 X X NNP cord-048471-7jszm1nd 138 31 - - HYPH cord-048471-7jszm1nd 138 32 Act act NN cord-048471-7jszm1nd 138 33 DNA dna NN cord-048471-7jszm1nd 138 34 polymerase polymerase NN cord-048471-7jszm1nd 138 35 and and CC cord-048471-7jszm1nd 138 36 the the DT cord-048471-7jszm1nd 138 37 primers primer NNS cord-048471-7jszm1nd 138 38 IRES IRES NNP cord-048471-7jszm1nd 138 39 Bgl Bgl NNP cord-048471-7jszm1nd 138 40 F F NNP cord-048471-7jszm1nd 138 41 ( ( -LRB- cord-048471-7jszm1nd 138 42 59-ACTCGAAGATCTTAA 59-actcgaagatcttaa CD cord-048471-7jszm1nd 138 43 - - HYPH cord-048471-7jszm1nd 138 44 TAGAGCTTCGAATTCTGCAGTCGA-39 tagagcttcgaattctgcagtcga-39 CD cord-048471-7jszm1nd 138 45 ) ) -RRB- cord-048471-7jszm1nd 138 46 , , , cord-048471-7jszm1nd 138 47 containing contain VBG cord-048471-7jszm1nd 138 48 the the DT cord-048471-7jszm1nd 138 49 BglII BglII NNP cord-048471-7jszm1nd 138 50 restriction restriction NN cord-048471-7jszm1nd 138 51 site site NN cord-048471-7jszm1nd 138 52 ( ( -LRB- cord-048471-7jszm1nd 138 53 bold bold JJ cord-048471-7jszm1nd 138 54 ) ) -RRB- cord-048471-7jszm1nd 138 55 and and CC cord-048471-7jszm1nd 138 56 translation translation NN cord-048471-7jszm1nd 138 57 termination termination NN cord-048471-7jszm1nd 138 58 codons codon NNS cord-048471-7jszm1nd 138 59 ( ( -LRB- cord-048471-7jszm1nd 138 60 underlined underline VBN cord-048471-7jszm1nd 138 61 ) ) -RRB- cord-048471-7jszm1nd 138 62 to to TO cord-048471-7jszm1nd 138 63 prevent prevent VB cord-048471-7jszm1nd 138 64 carry carry NN cord-048471-7jszm1nd 138 65 over over IN cord-048471-7jszm1nd 138 66 translation translation NN cord-048471-7jszm1nd 138 67 as as IN cord-048471-7jszm1nd 138 68 before before RB cord-048471-7jszm1nd 138 69 , , , cord-048471-7jszm1nd 138 70 and and CC cord-048471-7jszm1nd 138 71 IRES IRES NNP cord-048471-7jszm1nd 138 72 Sac Sac NNP cord-048471-7jszm1nd 138 73 R r NN cord-048471-7jszm1nd 138 74 ( ( -LRB- cord-048471-7jszm1nd 138 75 59-ACTCGAGAGCTCTGTGGCCATATTATCATC 59-actcgagagctctgtggccatattatcatc CD cord-048471-7jszm1nd 138 76 - - HYPH cord-048471-7jszm1nd 138 77 GTG-39 GTG-39 NNP cord-048471-7jszm1nd 138 78 ) ) -RRB- cord-048471-7jszm1nd 138 79 , , , cord-048471-7jszm1nd 138 80 containing contain VBG cord-048471-7jszm1nd 138 81 the the DT cord-048471-7jszm1nd 138 82 SacI SacI NNP cord-048471-7jszm1nd 138 83 restriction restriction NN cord-048471-7jszm1nd 138 84 site site NN cord-048471-7jszm1nd 138 85 ( ( -LRB- cord-048471-7jszm1nd 138 86 bold bold JJ cord-048471-7jszm1nd 138 87 ) ) -RRB- cord-048471-7jszm1nd 138 88 . . . cord-048471-7jszm1nd 139 1 The the DT cord-048471-7jszm1nd 139 2 IRES ires JJ cord-048471-7jszm1nd 139 3 amplicon amplicon NN cord-048471-7jszm1nd 139 4 was be VBD cord-048471-7jszm1nd 139 5 ligated ligate VBN cord-048471-7jszm1nd 139 6 to to IN cord-048471-7jszm1nd 139 7 the the DT cord-048471-7jszm1nd 139 8 pEGFP pEGFP NNP cord-048471-7jszm1nd 139 9 - - HYPH cord-048471-7jszm1nd 139 10 C1 c1 NN cord-048471-7jszm1nd 139 11 vector vector NN cord-048471-7jszm1nd 139 12 follwing follwe VBG cord-048471-7jszm1nd 139 13 restriction restriction NN cord-048471-7jszm1nd 139 14 Whole whole JJ cord-048471-7jszm1nd 139 15 cell cell NN cord-048471-7jszm1nd 139 16 lysate lysate NN cord-048471-7jszm1nd 139 17 was be VBD cord-048471-7jszm1nd 139 18 collected collect VBN cord-048471-7jszm1nd 139 19 at at IN cord-048471-7jszm1nd 139 20 the the DT cord-048471-7jszm1nd 139 21 following following JJ cord-048471-7jszm1nd 139 22 time time NN cord-048471-7jszm1nd 139 23 points point NNS cord-048471-7jszm1nd 139 24 following follow VBG cord-048471-7jszm1nd 139 25 CHX CHX NNP cord-048471-7jszm1nd 139 26 treatment treatment NN cord-048471-7jszm1nd 139 27 : : : cord-048471-7jszm1nd 139 28 0 0 CD cord-048471-7jszm1nd 139 29 hr hr NN cord-048471-7jszm1nd 139 30 , , , cord-048471-7jszm1nd 139 31 1 1 CD cord-048471-7jszm1nd 139 32 hr hr NN cord-048471-7jszm1nd 139 33 , , , cord-048471-7jszm1nd 139 34 3 3 CD cord-048471-7jszm1nd 139 35 hr hr NN cord-048471-7jszm1nd 139 36 , , , cord-048471-7jszm1nd 139 37 6 6 CD cord-048471-7jszm1nd 139 38 hr hr NN cord-048471-7jszm1nd 139 39 , , , cord-048471-7jszm1nd 139 40 12 12 CD cord-048471-7jszm1nd 139 41 hr hr NN cord-048471-7jszm1nd 139 42 , , , cord-048471-7jszm1nd 139 43 24 24 CD cord-048471-7jszm1nd 139 44 hr hr NN cord-048471-7jszm1nd 139 45 . . . cord-048471-7jszm1nd 140 1 Bradford Bradford NNP cord-048471-7jszm1nd 140 2 analysis analysis NN cord-048471-7jszm1nd 140 3 was be VBD cord-048471-7jszm1nd 140 4 performed perform VBN cord-048471-7jszm1nd 140 5 on on IN cord-048471-7jszm1nd 140 6 the the DT cord-048471-7jszm1nd 140 7 lysates lysate NNS cord-048471-7jszm1nd 140 8 to to TO cord-048471-7jszm1nd 140 9 ensure ensure VB cord-048471-7jszm1nd 140 10 equal equal JJ cord-048471-7jszm1nd 140 11 loading loading NN cord-048471-7jszm1nd 140 12 . . . cord-048471-7jszm1nd 141 1 Following follow VBG cord-048471-7jszm1nd 141 2 Western western JJ cord-048471-7jszm1nd 141 3 analysis analysis NN cord-048471-7jszm1nd 141 4 the the DT cord-048471-7jszm1nd 141 5 ECL ECL NNP cord-048471-7jszm1nd 141 6 treated treat VBD cord-048471-7jszm1nd 141 7 membrane membrane NN cord-048471-7jszm1nd 141 8 was be VBD cord-048471-7jszm1nd 141 9 exposed expose VBN cord-048471-7jszm1nd 141 10 to to TO cord-048471-7jszm1nd 141 11 film film VB cord-048471-7jszm1nd 141 12 for for IN cord-048471-7jszm1nd 141 13 1 1 CD cord-048471-7jszm1nd 141 14 min min NN cord-048471-7jszm1nd 141 15 . . . cord-048471-7jszm1nd 142 1 Molecular molecular JJ cord-048471-7jszm1nd 142 2 weight weight NN cord-048471-7jszm1nd 142 3 marker marker NN cord-048471-7jszm1nd 142 4 is be VBZ cord-048471-7jszm1nd 142 5 represented represent VBN cord-048471-7jszm1nd 142 6 in in IN cord-048471-7jszm1nd 142 7 lane lane NN cord-048471-7jszm1nd 142 8 1 1 CD cord-048471-7jszm1nd 142 9 . . . cord-048471-7jszm1nd 143 1 doi:10.1371 doi:10.1371 NNP cord-048471-7jszm1nd 144 1 /journal.pone.0002169.g008 /journal.pone.0002169.g008 NNP cord-048471-7jszm1nd 144 2 enzyme enzyme NN cord-048471-7jszm1nd 144 3 digest digest NN cord-048471-7jszm1nd 144 4 of of IN cord-048471-7jszm1nd 144 5 both both DT cord-048471-7jszm1nd 144 6 amplicon amplicon NN cord-048471-7jszm1nd 144 7 and and CC cord-048471-7jszm1nd 144 8 vector vector NN cord-048471-7jszm1nd 144 9 with with IN cord-048471-7jszm1nd 144 10 BgIII BgIII NNP cord-048471-7jszm1nd 144 11 and and CC cord-048471-7jszm1nd 144 12 SacI SacI NNP cord-048471-7jszm1nd 144 13 restriction restriction NN cord-048471-7jszm1nd 144 14 enzymes enzyme NNS cord-048471-7jszm1nd 144 15 , , , cord-048471-7jszm1nd 144 16 and and CC cord-048471-7jszm1nd 144 17 the the DT cord-048471-7jszm1nd 144 18 ligated ligate VBN cord-048471-7jszm1nd 144 19 DNA dna NN cord-048471-7jszm1nd 144 20 used use VBN cord-048471-7jszm1nd 144 21 to to TO cord-048471-7jszm1nd 144 22 transform transform VB cord-048471-7jszm1nd 144 23 E.coli E.coli NNS cord-048471-7jszm1nd 144 24 Top10 Top10 NNP cord-048471-7jszm1nd 144 25 . . . cord-048471-7jszm1nd 145 1 The the DT cord-048471-7jszm1nd 145 2 lacZ lacZ NNP cord-048471-7jszm1nd 145 3 amplicon amplicon NN cord-048471-7jszm1nd 145 4 described describe VBN cord-048471-7jszm1nd 145 5 previously previously RB cord-048471-7jszm1nd 145 6 was be VBD cord-048471-7jszm1nd 145 7 ligated ligate VBN cord-048471-7jszm1nd 145 8 to to IN cord-048471-7jszm1nd 145 9 the the DT cord-048471-7jszm1nd 145 10 intermediate intermediate JJ cord-048471-7jszm1nd 145 11 pEGFP pEGFP NNP cord-048471-7jszm1nd 145 12 - - HYPH cord-048471-7jszm1nd 145 13 C1 C1 NNP cord-048471-7jszm1nd 145 14 / / SYM cord-048471-7jszm1nd 145 15 IRES IRES NNP cord-048471-7jszm1nd 145 16 vector vector NN cord-048471-7jszm1nd 145 17 following follow VBG cord-048471-7jszm1nd 145 18 restriction restriction NN cord-048471-7jszm1nd 145 19 enzyme enzyme NN cord-048471-7jszm1nd 145 20 digest digest NN cord-048471-7jszm1nd 145 21 of of IN cord-048471-7jszm1nd 145 22 both both DT cord-048471-7jszm1nd 145 23 amplicon amplicon NN cord-048471-7jszm1nd 145 24 and and CC cord-048471-7jszm1nd 145 25 vector vector NN cord-048471-7jszm1nd 145 26 with with IN cord-048471-7jszm1nd 145 27 HindIII HindIII NNS cord-048471-7jszm1nd 145 28 and and CC cord-048471-7jszm1nd 145 29 ApaI ApaI NNP cord-048471-7jszm1nd 145 30 restriction restriction NN cord-048471-7jszm1nd 145 31 enzymes enzyme NNS cord-048471-7jszm1nd 145 32 , , , cord-048471-7jszm1nd 145 33 and and CC cord-048471-7jszm1nd 145 34 the the DT cord-048471-7jszm1nd 145 35 ligated ligate VBN cord-048471-7jszm1nd 145 36 DNA dna NN cord-048471-7jszm1nd 145 37 used use VBN cord-048471-7jszm1nd 145 38 to to TO cord-048471-7jszm1nd 145 39 transform transform VB cord-048471-7jszm1nd 145 40 E.coli E.coli NNS cord-048471-7jszm1nd 145 41 Top10 Top10 NNP cord-048471-7jszm1nd 145 42 . . . cord-048471-7jszm1nd 146 1 The the DT cord-048471-7jszm1nd 146 2 JV JV NNP cord-048471-7jszm1nd 146 3 3C 3c NN cord-048471-7jszm1nd 146 4 protease protease NN cord-048471-7jszm1nd 146 5 mutant mutant NN cord-048471-7jszm1nd 146 6 was be VBD cord-048471-7jszm1nd 146 7 created create VBN cord-048471-7jszm1nd 146 8 by by IN cord-048471-7jszm1nd 146 9 point point NN cord-048471-7jszm1nd 146 10 mutation mutation NN cord-048471-7jszm1nd 146 11 of of IN cord-048471-7jszm1nd 146 12 the the DT cord-048471-7jszm1nd 146 13 critical critical JJ cord-048471-7jszm1nd 146 14 TGT TGT NNP cord-048471-7jszm1nd 146 15 encoded encode VBD cord-048471-7jszm1nd 146 16 cysteine cysteine NN cord-048471-7jszm1nd 146 17 residue residue NN cord-048471-7jszm1nd 146 18 , , , cord-048471-7jszm1nd 146 19 within within IN cord-048471-7jszm1nd 146 20 the the DT cord-048471-7jszm1nd 146 21 GDCG GDCG NNP cord-048471-7jszm1nd 146 22 active active JJ cord-048471-7jszm1nd 146 23 site site NN cord-048471-7jszm1nd 146 24 motif motif NN cord-048471-7jszm1nd 146 25 , , , cord-048471-7jszm1nd 146 26 to to IN cord-048471-7jszm1nd 146 27 a a DT cord-048471-7jszm1nd 146 28 GGT ggt NN cord-048471-7jszm1nd 146 29 encoded encode VBN cord-048471-7jszm1nd 146 30 glycine glycine NN cord-048471-7jszm1nd 146 31 residue residue NN cord-048471-7jszm1nd 146 32 by by IN cord-048471-7jszm1nd 146 33 mutagenic mutagenic JJ cord-048471-7jszm1nd 146 34 overlap overlap NN cord-048471-7jszm1nd 146 35 PCR PCR NNP cord-048471-7jszm1nd 146 36 using use VBG cord-048471-7jszm1nd 146 37 Bio Bio NNP cord-048471-7jszm1nd 146 38 - - HYPH cord-048471-7jszm1nd 146 39 X X NNP cord-048471-7jszm1nd 146 40 - - HYPH cord-048471-7jszm1nd 146 41 Act act NN cord-048471-7jszm1nd 146 42 DNA dna NN cord-048471-7jszm1nd 146 43 polymerase polymerase NN cord-048471-7jszm1nd 146 44 . . . cord-048471-7jszm1nd 147 1 Three three CD cord-048471-7jszm1nd 147 2 rounds round NNS cord-048471-7jszm1nd 147 3 of of IN cord-048471-7jszm1nd 147 4 amplification amplification NN cord-048471-7jszm1nd 147 5 using use VBG cord-048471-7jszm1nd 147 6 the the DT cord-048471-7jszm1nd 147 7 JV JV NNP cord-048471-7jszm1nd 147 8 full full JJ cord-048471-7jszm1nd 147 9 length length NN cord-048471-7jszm1nd 147 10 cDNA cdna NN cord-048471-7jszm1nd 147 11 clone clone NN cord-048471-7jszm1nd 147 12 as as IN cord-048471-7jszm1nd 147 13 template template NN cord-048471-7jszm1nd 147 14 were be VBD cord-048471-7jszm1nd 147 15 used use VBN cord-048471-7jszm1nd 147 16 to to TO cord-048471-7jszm1nd 147 17 generate generate VB cord-048471-7jszm1nd 147 18 the the DT cord-048471-7jszm1nd 147 19 final final JJ cord-048471-7jszm1nd 147 20 mutant mutant JJ cord-048471-7jszm1nd 147 21 protease protease NN cord-048471-7jszm1nd 147 22 cassette cassette NN cord-048471-7jszm1nd 147 23 . . . cord-048471-7jszm1nd 148 1 Round round JJ cord-048471-7jszm1nd 148 2 1 1 CD cord-048471-7jszm1nd 148 3 used use VBD cord-048471-7jszm1nd 148 4 the the DT cord-048471-7jszm1nd 148 5 primers primer NNS cord-048471-7jszm1nd 148 6 JV JV NNP cord-048471-7jszm1nd 148 7 F1 F1 NNP cord-048471-7jszm1nd 148 8 ( ( -LRB- cord-048471-7jszm1nd 148 9 59-CGTCTCAGGGTTGATACT-39 59-CGTCTCAGGGTTGATACT-39 NNP cord-048471-7jszm1nd 148 10 ) ) -RRB- cord-048471-7jszm1nd 148 11 and and CC cord-048471-7jszm1nd 148 12 JV JV NNP cord-048471-7jszm1nd 148 13 Mut Mut NNP cord-048471-7jszm1nd 148 14 1 1 CD cord-048471-7jszm1nd 148 15 ( ( -LRB- cord-048471-7jszm1nd 148 16 59-GCAACCACCGTCACCAG-39 59-GCAACCACCGTCACCAG-39 NNP cord-048471-7jszm1nd 148 17 ) ) -RRB- cord-048471-7jszm1nd 148 18 , , , cord-048471-7jszm1nd 148 19 yielding yield VBG cord-048471-7jszm1nd 148 20 a a DT cord-048471-7jszm1nd 148 21 222 222 CD cord-048471-7jszm1nd 148 22 bp bp NNP cord-048471-7jszm1nd 148 23 amplicon amplicon NNP cord-048471-7jszm1nd 148 24 ( ( -LRB- cord-048471-7jszm1nd 148 25 point point NN cord-048471-7jszm1nd 148 26 mutation mutation NN cord-048471-7jszm1nd 148 27 nucleotide nucleotide NN cord-048471-7jszm1nd 148 28 shown show VBN cord-048471-7jszm1nd 148 29 in in IN cord-048471-7jszm1nd 148 30 bold bold JJ cord-048471-7jszm1nd 148 31 ) ) -RRB- cord-048471-7jszm1nd 148 32 . . . cord-048471-7jszm1nd 149 1 Round round JJ cord-048471-7jszm1nd 149 2 2 2 CD cord-048471-7jszm1nd 149 3 used use VBD cord-048471-7jszm1nd 149 4 the the DT cord-048471-7jszm1nd 149 5 primers primer NNS cord-048471-7jszm1nd 149 6 JV JV NNP cord-048471-7jszm1nd 149 7 Mut Mut NNP cord-048471-7jszm1nd 149 8 2 2 CD cord-048471-7jszm1nd 149 9 ( ( -LRB- cord-048471-7jszm1nd 149 10 59-CTGGTGACGGT 59-ctggtgacggt CD cord-048471-7jszm1nd 149 11 - - HYPH cord-048471-7jszm1nd 149 12 GGTTGC-39 ggttgc-39 NN cord-048471-7jszm1nd 149 13 ) ) -RRB- cord-048471-7jszm1nd 149 14 and and CC cord-048471-7jszm1nd 149 15 JV JV NNP cord-048471-7jszm1nd 149 16 R2 R2 NNP cord-048471-7jszm1nd 149 17 ( ( -LRB- cord-048471-7jszm1nd 149 18 59-TTCCTGGGAGGAACAAGTT-39 59-TTCCTGGGAGGAACAAGTT-39 NNP cord-048471-7jszm1nd 149 19 ) ) -RRB- cord-048471-7jszm1nd 149 20 , , , cord-048471-7jszm1nd 149 21 yielding yield VBG cord-048471-7jszm1nd 149 22 a a DT cord-048471-7jszm1nd 149 23 651 651 CD cord-048471-7jszm1nd 149 24 bp bp NNP cord-048471-7jszm1nd 149 25 amplicon amplicon NNP cord-048471-7jszm1nd 149 26 . . . cord-048471-7jszm1nd 150 1 Amplicons Amplicons NNP cord-048471-7jszm1nd 150 2 generated generate VBN cord-048471-7jszm1nd 150 3 in in IN cord-048471-7jszm1nd 150 4 rounds round NNS cord-048471-7jszm1nd 150 5 1 1 CD cord-048471-7jszm1nd 150 6 and and CC cord-048471-7jszm1nd 150 7 2 2 CD cord-048471-7jszm1nd 150 8 were be VBD cord-048471-7jszm1nd 150 9 pooled pool VBN cord-048471-7jszm1nd 150 10 to to TO cord-048471-7jszm1nd 150 11 serve serve VB cord-048471-7jszm1nd 150 12 as as IN cord-048471-7jszm1nd 150 13 template template NN cord-048471-7jszm1nd 150 14 for for IN cord-048471-7jszm1nd 150 15 round round JJ cord-048471-7jszm1nd 150 16 3 3 CD cord-048471-7jszm1nd 150 17 using use VBG cord-048471-7jszm1nd 150 18 the the DT cord-048471-7jszm1nd 150 19 primers primer NNS cord-048471-7jszm1nd 150 20 JV JV NNP cord-048471-7jszm1nd 150 21 NF NF NNP cord-048471-7jszm1nd 150 22 ( ( -LRB- cord-048471-7jszm1nd 150 23 59-ATGTCAACCACCACCAGC 59-atgtcaaccaccaccagc CD cord-048471-7jszm1nd 150 24 -39 -39 NN cord-048471-7jszm1nd 150 25 ) ) -RRB- cord-048471-7jszm1nd 150 26 and and CC cord-048471-7jszm1nd 150 27 JV JV NNP cord-048471-7jszm1nd 150 28 NR NR NNP cord-048471-7jszm1nd 150 29 ( ( -LRB- cord-048471-7jszm1nd 150 30 59-AAGGGCTCCGGTGAAGG-39 59-AAGGGCTCCGGTGAAGG-39 NNP cord-048471-7jszm1nd 150 31 ) ) -RRB- cord-048471-7jszm1nd 150 32 . . . cord-048471-7jszm1nd 151 1 This this DT cord-048471-7jszm1nd 151 2 cassette cassette NN cord-048471-7jszm1nd 151 3 contained contain VBD cord-048471-7jszm1nd 151 4 two two CD cord-048471-7jszm1nd 151 5 BclI BclI NNP cord-048471-7jszm1nd 151 6 restriction restriction NN cord-048471-7jszm1nd 151 7 sites site NNS cord-048471-7jszm1nd 151 8 flanking flank VBG cord-048471-7jszm1nd 151 9 the the DT cord-048471-7jszm1nd 151 10 3Cprotease 3cprotease CD cord-048471-7jszm1nd 151 11 active active JJ cord-048471-7jszm1nd 151 12 site site NN cord-048471-7jszm1nd 151 13 , , , cord-048471-7jszm1nd 151 14 as as IN cord-048471-7jszm1nd 151 15 also also RB cord-048471-7jszm1nd 151 16 found find VBN cord-048471-7jszm1nd 151 17 in in IN cord-048471-7jszm1nd 151 18 the the DT cord-048471-7jszm1nd 151 19 wild wild JJ cord-048471-7jszm1nd 151 20 - - HYPH cord-048471-7jszm1nd 151 21 type type NN cord-048471-7jszm1nd 151 22 full full JJ cord-048471-7jszm1nd 151 23 length length NN cord-048471-7jszm1nd 151 24 clone clone NN cord-048471-7jszm1nd 151 25 . . . cord-048471-7jszm1nd 152 1 Restriction restriction NN cord-048471-7jszm1nd 152 2 digest digest NN cord-048471-7jszm1nd 152 3 using use VBG cord-048471-7jszm1nd 152 4 BclI BclI NNP cord-048471-7jszm1nd 152 5 was be VBD cord-048471-7jszm1nd 152 6 used use VBN cord-048471-7jszm1nd 152 7 to to TO cord-048471-7jszm1nd 152 8 remove remove VB cord-048471-7jszm1nd 152 9 the the DT cord-048471-7jszm1nd 152 10 appropriate appropriate JJ cord-048471-7jszm1nd 152 11 wild wild JJ cord-048471-7jszm1nd 152 12 - - HYPH cord-048471-7jszm1nd 152 13 type type NN cord-048471-7jszm1nd 152 14 cassette cassette NN cord-048471-7jszm1nd 152 15 from from IN cord-048471-7jszm1nd 152 16 the the DT cord-048471-7jszm1nd 152 17 JV JV NNP cord-048471-7jszm1nd 152 18 full full JJ cord-048471-7jszm1nd 152 19 length length NN cord-048471-7jszm1nd 152 20 clone clone NN cord-048471-7jszm1nd 152 21 . . . cord-048471-7jszm1nd 153 1 The the DT cord-048471-7jszm1nd 153 2 mutant mutant JJ cord-048471-7jszm1nd 153 3 cassette cassette NN cord-048471-7jszm1nd 153 4 was be VBD cord-048471-7jszm1nd 153 5 also also RB cord-048471-7jszm1nd 153 6 digested digest VBN cord-048471-7jszm1nd 153 7 with with IN cord-048471-7jszm1nd 153 8 BclI BclI NNP cord-048471-7jszm1nd 153 9 prior prior RB cord-048471-7jszm1nd 153 10 to to IN cord-048471-7jszm1nd 153 11 ligation ligation NN cord-048471-7jszm1nd 153 12 to to IN cord-048471-7jszm1nd 153 13 the the DT cord-048471-7jszm1nd 153 14 BclI BclI NNP cord-048471-7jszm1nd 153 15 - - HYPH cord-048471-7jszm1nd 153 16 digested digest VBN cord-048471-7jszm1nd 153 17 JV JV NNP cord-048471-7jszm1nd 153 18 full full JJ cord-048471-7jszm1nd 153 19 length length NN cord-048471-7jszm1nd 153 20 clone clone NN cord-048471-7jszm1nd 153 21 . . . cord-048471-7jszm1nd 154 1 The the DT cord-048471-7jszm1nd 154 2 ligated ligate VBN cord-048471-7jszm1nd 154 3 DNA dna NN cord-048471-7jszm1nd 154 4 was be VBD cord-048471-7jszm1nd 154 5 used use VBN cord-048471-7jszm1nd 154 6 to to TO cord-048471-7jszm1nd 154 7 transform transform VB cord-048471-7jszm1nd 154 8 E.coli E.coli NNS cord-048471-7jszm1nd 154 9 Top10 Top10 NNP cord-048471-7jszm1nd 154 10 , , , cord-048471-7jszm1nd 154 11 and and CC cord-048471-7jszm1nd 154 12 was be VBD cord-048471-7jszm1nd 154 13 designated designate VBN cord-048471-7jszm1nd 154 14 JV JV NNP cord-048471-7jszm1nd 154 15 3C 3c NN cord-048471-7jszm1nd 154 16 mut mut NNP cord-048471-7jszm1nd 154 17 . . . cord-048471-7jszm1nd 155 1 Construction construction NN cord-048471-7jszm1nd 155 2 of of IN cord-048471-7jszm1nd 155 3 JV JV NNP cord-048471-7jszm1nd 155 4 3C 3C NNP cord-048471-7jszm1nd 155 5 mut mut NNP cord-048471-7jszm1nd 155 6 /polySTOP /polySTOP NNP cord-048471-7jszm1nd 155 7 was be VBD cord-048471-7jszm1nd 155 8 as as IN cord-048471-7jszm1nd 155 9 follows follow VBZ cord-048471-7jszm1nd 155 10 : : : cord-048471-7jszm1nd 155 11 complementary complementary JJ cord-048471-7jszm1nd 155 12 oligonucleotides oligonucleotide NNS cord-048471-7jszm1nd 155 13 with with IN cord-048471-7jszm1nd 155 14 three three CD cord-048471-7jszm1nd 155 15 translation translation NN cord-048471-7jszm1nd 155 16 termination termination NN cord-048471-7jszm1nd 155 17 codons codon NNS cord-048471-7jszm1nd 155 18 ( ( -LRB- cord-048471-7jszm1nd 155 19 underlined underline VBN cord-048471-7jszm1nd 155 20 ) ) -RRB- cord-048471-7jszm1nd 155 21 in in IN cord-048471-7jszm1nd 155 22 each each DT cord-048471-7jszm1nd 155 23 reading reading NN cord-048471-7jszm1nd 155 24 frame frame NN cord-048471-7jszm1nd 155 25 in in IN cord-048471-7jszm1nd 155 26 sense sense NN cord-048471-7jszm1nd 155 27 and and CC cord-048471-7jszm1nd 155 28 anti anti JJ cord-048471-7jszm1nd 155 29 - - JJ cord-048471-7jszm1nd 155 30 sense sense JJ cord-048471-7jszm1nd 155 31 orientations orientation NNS cord-048471-7jszm1nd 155 32 were be VBD cord-048471-7jszm1nd 155 33 desgined desgine VBN cord-048471-7jszm1nd 155 34 in in IN cord-048471-7jszm1nd 155 35 such such PDT cord-048471-7jszm1nd 155 36 a a DT cord-048471-7jszm1nd 155 37 way way NN cord-048471-7jszm1nd 155 38 that that IN cord-048471-7jszm1nd 155 39 upon upon IN cord-048471-7jszm1nd 155 40 annealing anneal VBG cord-048471-7jszm1nd 155 41 the the DT cord-048471-7jszm1nd 155 42 duplex duplex NN cord-048471-7jszm1nd 155 43 would would MD cord-048471-7jszm1nd 155 44 contain contain VB cord-048471-7jszm1nd 155 45 blunt blunt JJ cord-048471-7jszm1nd 155 46 termini terminus NNS cord-048471-7jszm1nd 155 47 . . . cord-048471-7jszm1nd 156 1 The the DT cord-048471-7jszm1nd 156 2 oligonucleotides oligonucleotide NNS cord-048471-7jszm1nd 156 3 were be VBD cord-048471-7jszm1nd 156 4 termed term VBN cord-048471-7jszm1nd 156 5 pSTOP pSTOP NNP cord-048471-7jszm1nd 156 6 Top Top NNP cord-048471-7jszm1nd 156 7 ( ( -LRB- cord-048471-7jszm1nd 156 8 59-CTAGGTAAGTAAACGCGTCTACT 59-ctaggtaagtaaacgcgtctact CD cord-048471-7jszm1nd 156 9 - - HYPH cord-048471-7jszm1nd 156 10 CACTCAC-39 cactcac-39 CD cord-048471-7jszm1nd 156 11 ) ) -RRB- cord-048471-7jszm1nd 156 12 and and CC cord-048471-7jszm1nd 156 13 pSTOP pSTOP NNP cord-048471-7jszm1nd 156 14 Comp Comp NNP cord-048471-7jszm1nd 156 15 ( ( -LRB- cord-048471-7jszm1nd 156 16 59-GTGAGTGAGTA 59-gtgagtgagta CD cord-048471-7jszm1nd 156 17 - - HYPH cord-048471-7jszm1nd 156 18 GACGCGTTTACTTCAATAG-39 GACGCGTTTACTTCAATAG-39 NNP cord-048471-7jszm1nd 156 19 ) ) -RRB- cord-048471-7jszm1nd 156 20 . . . cord-048471-7jszm1nd 157 1 Each each DT cord-048471-7jszm1nd 157 2 oligo oligo NN cord-048471-7jszm1nd 157 3 ( ( -LRB- cord-048471-7jszm1nd 157 4 1 1 CD cord-048471-7jszm1nd 157 5 mg mg CD cord-048471-7jszm1nd 157 6 ) ) -RRB- cord-048471-7jszm1nd 157 7 was be VBD cord-048471-7jszm1nd 157 8 incubated incubate VBN cord-048471-7jszm1nd 157 9 with with IN cord-048471-7jszm1nd 157 10 T4 T4 NNP cord-048471-7jszm1nd 157 11 polynucleotide polynucleotide NNP cord-048471-7jszm1nd 157 12 kinase kinase NN cord-048471-7jszm1nd 157 13 and and CC cord-048471-7jszm1nd 157 14 ATP ATP NNP cord-048471-7jszm1nd 157 15 to to TO cord-048471-7jszm1nd 157 16 phosphorylate phosphorylate VB cord-048471-7jszm1nd 157 17 the the DT cord-048471-7jszm1nd 157 18 59 59 CD cord-048471-7jszm1nd 157 19 termini terminus NNS cord-048471-7jszm1nd 157 20 , , , cord-048471-7jszm1nd 157 21 pooled pool VBN cord-048471-7jszm1nd 157 22 and and CC cord-048471-7jszm1nd 157 23 heated heat VBN cord-048471-7jszm1nd 157 24 to to IN cord-048471-7jszm1nd 157 25 75uC 75uc CD cord-048471-7jszm1nd 157 26 for for IN cord-048471-7jszm1nd 157 27 15 15 CD cord-048471-7jszm1nd 157 28 min min NN cord-048471-7jszm1nd 157 29 , , , cord-048471-7jszm1nd 157 30 and and CC cord-048471-7jszm1nd 157 31 left leave VBD cord-048471-7jszm1nd 157 32 to to TO cord-048471-7jszm1nd 157 33 cool cool VB cord-048471-7jszm1nd 157 34 to to IN cord-048471-7jszm1nd 157 35 room room NN cord-048471-7jszm1nd 157 36 temperature temperature NN cord-048471-7jszm1nd 157 37 to to TO cord-048471-7jszm1nd 157 38 anneal anneal VB cord-048471-7jszm1nd 157 39 the the DT cord-048471-7jszm1nd 157 40 oligos oligo NNS cord-048471-7jszm1nd 157 41 . . . cord-048471-7jszm1nd 158 1 Following follow VBG cord-048471-7jszm1nd 158 2 purification purification NN cord-048471-7jszm1nd 158 3 the the DT cord-048471-7jszm1nd 158 4 polySTOP polySTOP NNP cord-048471-7jszm1nd 158 5 duplex duplex NNP cord-048471-7jszm1nd 158 6 was be VBD cord-048471-7jszm1nd 158 7 ligated ligate VBN cord-048471-7jszm1nd 158 8 to to IN cord-048471-7jszm1nd 159 1 Eco47III Eco47III NNP cord-048471-7jszm1nd 159 2 digested digest VBD cord-048471-7jszm1nd 159 3 JV JV NNP cord-048471-7jszm1nd 159 4 3C 3C NNP cord-048471-7jszm1nd 159 5 mut mut NNP cord-048471-7jszm1nd 159 6 , , , cord-048471-7jszm1nd 159 7 and and CC cord-048471-7jszm1nd 159 8 ligated ligate VBN cord-048471-7jszm1nd 159 9 DNA DNA NNP cord-048471-7jszm1nd 159 10 was be VBD cord-048471-7jszm1nd 159 11 used use VBN cord-048471-7jszm1nd 159 12 to to TO cord-048471-7jszm1nd 159 13 transform transform VB cord-048471-7jszm1nd 159 14 E.coli E.coli NNS cord-048471-7jszm1nd 159 15 Top10 Top10 NNP cord-048471-7jszm1nd 159 16 . . . cord-048471-7jszm1nd 160 1 The the DT cord-048471-7jszm1nd 160 2 duplex duplex NN cord-048471-7jszm1nd 160 3 contained contain VBD cord-048471-7jszm1nd 160 4 the the DT cord-048471-7jszm1nd 160 5 unique unique JJ cord-048471-7jszm1nd 160 6 restriction restriction NN cord-048471-7jszm1nd 160 7 site site NN cord-048471-7jszm1nd 160 8 MluI MluI NNP cord-048471-7jszm1nd 160 9 ( ( -LRB- cord-048471-7jszm1nd 160 10 shown show VBN cord-048471-7jszm1nd 160 11 in in IN cord-048471-7jszm1nd 160 12 bold bold JJ cord-048471-7jszm1nd 160 13 ) ) -RRB- cord-048471-7jszm1nd 160 14 to to TO cord-048471-7jszm1nd 160 15 assist assist VB cord-048471-7jszm1nd 160 16 screening screening NN cord-048471-7jszm1nd 160 17 of of IN cord-048471-7jszm1nd 160 18 recombinant recombinant JJ cord-048471-7jszm1nd 160 19 clones clone NNS cord-048471-7jszm1nd 160 20 . . . cord-048471-7jszm1nd 161 1 The the DT cord-048471-7jszm1nd 161 2 V5 v5 NN cord-048471-7jszm1nd 161 3 epitope epitope NN cord-048471-7jszm1nd 161 4 ( ( -LRB- cord-048471-7jszm1nd 161 5 N N NNP cord-048471-7jszm1nd 161 6 - - HYPH cord-048471-7jszm1nd 161 7 Gly Gly NNP cord-048471-7jszm1nd 161 8 - - HYPH cord-048471-7jszm1nd 161 9 Lys Lys NNP cord-048471-7jszm1nd 161 10 - - HYPH cord-048471-7jszm1nd 161 11 Pro Pro NNP cord-048471-7jszm1nd 161 12 - - HYPH cord-048471-7jszm1nd 161 13 Ile Ile NNP cord-048471-7jszm1nd 161 14 - - HYPH cord-048471-7jszm1nd 161 15 Pro Pro NNP cord-048471-7jszm1nd 161 16 - - NNP cord-048471-7jszm1nd 161 17 Asn Asn NNP cord-048471-7jszm1nd 161 18 - - HYPH cord-048471-7jszm1nd 161 19 Pro Pro NNP cord-048471-7jszm1nd 161 20 - - NNP cord-048471-7jszm1nd 161 21 Leu Leu NNP cord-048471-7jszm1nd 161 22 - - HYPH cord-048471-7jszm1nd 161 23 Leu Leu NNP cord-048471-7jszm1nd 161 24 - - HYPH cord-048471-7jszm1nd 161 25 Gly Gly NNP cord-048471-7jszm1nd 161 26 - - HYPH cord-048471-7jszm1nd 161 27 Leu Leu NNP cord-048471-7jszm1nd 161 28 - - HYPH cord-048471-7jszm1nd 161 29 Asp Asp NNP cord-048471-7jszm1nd 161 30 - - HYPH cord-048471-7jszm1nd 161 31 Ser Ser NNP cord-048471-7jszm1nd 161 32 - - HYPH cord-048471-7jszm1nd 161 33 Thr Thr NNP cord-048471-7jszm1nd 161 34 - - HYPH cord-048471-7jszm1nd 161 35 C C NNP cord-048471-7jszm1nd 161 36 ) ) -RRB- cord-048471-7jszm1nd 161 37 is be VBZ cord-048471-7jszm1nd 161 38 recognized recognize VBN cord-048471-7jszm1nd 161 39 by by IN cord-048471-7jszm1nd 161 40 the the DT cord-048471-7jszm1nd 161 41 anti anti JJ cord-048471-7jszm1nd 161 42 - - JJ cord-048471-7jszm1nd 161 43 V5 v5 JJ cord-048471-7jszm1nd 161 44 monoclonal monoclonal JJ cord-048471-7jszm1nd 161 45 antibody antibody NN cord-048471-7jszm1nd 161 46 ( ( -LRB- cord-048471-7jszm1nd 161 47 Invitrogen Invitrogen NNP cord-048471-7jszm1nd 161 48 ) ) -RRB- cord-048471-7jszm1nd 161 49 . . . cord-048471-7jszm1nd 162 1 Complementary complementary JJ cord-048471-7jszm1nd 162 2 oligonucleotides oligonucleotide NNS cord-048471-7jszm1nd 162 3 encoding encode VBG cord-048471-7jszm1nd 162 4 the the DT cord-048471-7jszm1nd 162 5 V5 V5 NNP cord-048471-7jszm1nd 162 6 epitope epitope NN cord-048471-7jszm1nd 162 7 were be VBD cord-048471-7jszm1nd 162 8 designed design VBN cord-048471-7jszm1nd 162 9 in in IN cord-048471-7jszm1nd 162 10 such such PDT cord-048471-7jszm1nd 162 11 a a DT cord-048471-7jszm1nd 162 12 way way NN cord-048471-7jszm1nd 162 13 as as IN cord-048471-7jszm1nd 162 14 to to TO cord-048471-7jszm1nd 162 15 generate generate VB cord-048471-7jszm1nd 162 16 SacII SacII NNP cord-048471-7jszm1nd 162 17 compatible compatible JJ cord-048471-7jszm1nd 162 18 termini termini NN cord-048471-7jszm1nd 162 19 following follow VBG cord-048471-7jszm1nd 162 20 annealing anneal VBG cord-048471-7jszm1nd 162 21 ( ( -LRB- cord-048471-7jszm1nd 162 22 bold bold JJ cord-048471-7jszm1nd 162 23 ) ) -RRB- cord-048471-7jszm1nd 162 24 , , , cord-048471-7jszm1nd 162 25 and and CC cord-048471-7jszm1nd 162 26 to to TO cord-048471-7jszm1nd 162 27 preserve preserve VB cord-048471-7jszm1nd 162 28 the the DT cord-048471-7jszm1nd 162 29 reading reading NN cord-048471-7jszm1nd 162 30 frame frame NN cord-048471-7jszm1nd 162 31 when when WRB cord-048471-7jszm1nd 162 32 inserted insert VBN cord-048471-7jszm1nd 162 33 into into IN cord-048471-7jszm1nd 162 34 the the DT cord-048471-7jszm1nd 162 35 SacII SacII NNP cord-048471-7jszm1nd 162 36 restriction restriction NN cord-048471-7jszm1nd 162 37 site site NN cord-048471-7jszm1nd 162 38 at at IN cord-048471-7jszm1nd 162 39 nucleotide nucleotide JJ cord-048471-7jszm1nd 162 40 123 123 CD cord-048471-7jszm1nd 162 41 within within IN cord-048471-7jszm1nd 162 42 the the DT cord-048471-7jszm1nd 162 43 59 59 CD cord-048471-7jszm1nd 162 44 GS g NNS cord-048471-7jszm1nd 162 45 of of IN cord-048471-7jszm1nd 162 46 the the DT cord-048471-7jszm1nd 162 47 JV JV NNP cord-048471-7jszm1nd 162 48 genome genome NN cord-048471-7jszm1nd 162 49 ( ( -LRB- cord-048471-7jszm1nd 162 50 underlined underline VBN cord-048471-7jszm1nd 162 51 ) ) -RRB- cord-048471-7jszm1nd 162 52 . . . cord-048471-7jszm1nd 163 1 The the DT cord-048471-7jszm1nd 163 2 oligos oligo NNS cord-048471-7jszm1nd 163 3 were be VBD cord-048471-7jszm1nd 163 4 termed term VBN cord-048471-7jszm1nd 163 5 V5 V5 NNP cord-048471-7jszm1nd 163 6 Top Top NNP cord-048471-7jszm1nd 163 7 ( ( -LRB- cord-048471-7jszm1nd 163 8 59-GGTAAGCCTATCCC 59-ggtaagcctatccc CD cord-048471-7jszm1nd 163 9 - - HYPH cord-048471-7jszm1nd 163 10 TAACCCTCTCCTCGGTCTCGATTCTACGAGC-39 taaccctctcctcggtctcgattctacgagc-39 CD cord-048471-7jszm1nd 163 11 ) ) -RRB- cord-048471-7jszm1nd 163 12 and and CC cord-048471-7jszm1nd 163 13 V5 V5 NNP cord-048471-7jszm1nd 163 14 Comp Comp NNP cord-048471-7jszm1nd 163 15 ( ( -LRB- cord-048471-7jszm1nd 163 16 59-TCGTAGAATCGAGACCGAGGAGAGGGT 59-tcgtagaatcgagaccgaggagagggt CD cord-048471-7jszm1nd 163 17 - - HYPH cord-048471-7jszm1nd 163 18 TAGGGATAGGCTTACCGC-39 tagggataggcttaccgc-39 CD cord-048471-7jszm1nd 163 19 ) ) -RRB- cord-048471-7jszm1nd 163 20 . . . cord-048471-7jszm1nd 164 1 The the DT cord-048471-7jszm1nd 164 2 oligos oligo NNS cord-048471-7jszm1nd 164 3 were be VBD cord-048471-7jszm1nd 164 4 phosphorylated phosphorylate VBN cord-048471-7jszm1nd 164 5 and and CC cord-048471-7jszm1nd 164 6 annealed anneal VBN cord-048471-7jszm1nd 164 7 as as IN cord-048471-7jszm1nd 164 8 described describe VBN cord-048471-7jszm1nd 164 9 previously previously RB cord-048471-7jszm1nd 164 10 and and CC cord-048471-7jszm1nd 164 11 the the DT cord-048471-7jszm1nd 164 12 duplex duplex NN cord-048471-7jszm1nd 164 13 ligated ligate VBN cord-048471-7jszm1nd 164 14 to to IN cord-048471-7jszm1nd 164 15 the the DT cord-048471-7jszm1nd 164 16 SacII SacII NNP cord-048471-7jszm1nd 164 17 digested digest VBD cord-048471-7jszm1nd 164 18 JV JV NNP cord-048471-7jszm1nd 164 19 full full JJ cord-048471-7jszm1nd 164 20 length length NN cord-048471-7jszm1nd 164 21 clone clone NN cord-048471-7jszm1nd 164 22 . . . cord-048471-7jszm1nd 165 1 Ligated Ligated NNP cord-048471-7jszm1nd 165 2 DNA DNA NNP cord-048471-7jszm1nd 165 3 was be VBD cord-048471-7jszm1nd 165 4 used use VBN cord-048471-7jszm1nd 165 5 to to TO cord-048471-7jszm1nd 165 6 transform transform VB cord-048471-7jszm1nd 165 7 E.coli E.coli NNS cord-048471-7jszm1nd 165 8 Top10 Top10 NNP cord-048471-7jszm1nd 165 9 . . . cord-048471-7jszm1nd 166 1 In in IN cord-048471-7jszm1nd 166 2 vitro vitro FW cord-048471-7jszm1nd 166 3 coupled couple VBN cord-048471-7jszm1nd 166 4 transcription transcription NN cord-048471-7jszm1nd 166 5 and and CC cord-048471-7jszm1nd 166 6 translation translation NN cord-048471-7jszm1nd 166 7 was be VBD cord-048471-7jszm1nd 166 8 performed perform VBN cord-048471-7jszm1nd 166 9 using use VBG cord-048471-7jszm1nd 166 10 the the DT cord-048471-7jszm1nd 166 11 TNTH TNTH NNP cord-048471-7jszm1nd 166 12 Coupled Coupled NNP cord-048471-7jszm1nd 166 13 Reticulocyte Reticulocyte NNP cord-048471-7jszm1nd 166 14 Lysate Lysate NNP cord-048471-7jszm1nd 166 15 System System NNP cord-048471-7jszm1nd 166 16 ( ( -LRB- cord-048471-7jszm1nd 166 17 Promega Promega NNP cord-048471-7jszm1nd 166 18 ) ) -RRB- cord-048471-7jszm1nd 166 19 as as IN cord-048471-7jszm1nd 166 20 per per IN cord-048471-7jszm1nd 166 21 the the DT cord-048471-7jszm1nd 166 22 manufacturer manufacturer NN cord-048471-7jszm1nd 166 23 's 's POS cord-048471-7jszm1nd 166 24 instructions instruction NNS cord-048471-7jszm1nd 166 25 . . . cord-048471-7jszm1nd 167 1 Reactions reaction NNS cord-048471-7jszm1nd 167 2 were be VBD cord-048471-7jszm1nd 167 3 incubated incubate VBN cord-048471-7jszm1nd 167 4 at at IN cord-048471-7jszm1nd 167 5 30uC 30uc CD cord-048471-7jszm1nd 167 6 for for IN cord-048471-7jszm1nd 167 7 1 1 CD cord-048471-7jszm1nd 167 8 - - SYM cord-048471-7jszm1nd 167 9 2 2 CD cord-048471-7jszm1nd 167 10 hr hr NN cord-048471-7jszm1nd 167 11 . . . cord-048471-7jszm1nd 168 1 For for IN cord-048471-7jszm1nd 168 2 non non JJ cord-048471-7jszm1nd 168 3 - - JJ cord-048471-7jszm1nd 168 4 radiolabelled radiolabelled JJ cord-048471-7jszm1nd 168 5 reactions reaction NNS cord-048471-7jszm1nd 168 6 the the DT cord-048471-7jszm1nd 168 7 35 35 CD cord-048471-7jszm1nd 168 8 S S NNP cord-048471-7jszm1nd 168 9 - - HYPH cord-048471-7jszm1nd 168 10 Methionine Methionine NNP cord-048471-7jszm1nd 168 11 was be VBD cord-048471-7jszm1nd 168 12 replaced replace VBN cord-048471-7jszm1nd 168 13 with with IN cord-048471-7jszm1nd 168 14 1 1 CD cord-048471-7jszm1nd 168 15 mM mm CD cord-048471-7jszm1nd 168 16 unlabelled unlabelled JJ cord-048471-7jszm1nd 168 17 Methionine methionine NN cord-048471-7jszm1nd 168 18 ( ( -LRB- cord-048471-7jszm1nd 168 19 2 2 CD cord-048471-7jszm1nd 168 20 ml ml NN cord-048471-7jszm1nd 168 21 ) ) -RRB- cord-048471-7jszm1nd 168 22 . . . cord-048471-7jszm1nd 169 1 Reaction reaction NN cord-048471-7jszm1nd 169 2 products product NNS cord-048471-7jszm1nd 169 3 ( ( -LRB- cord-048471-7jszm1nd 169 4 1 1 CD cord-048471-7jszm1nd 169 5 - - SYM cord-048471-7jszm1nd 169 6 2 2 CD cord-048471-7jszm1nd 169 7 ml ml NNS cord-048471-7jszm1nd 169 8 ) ) -RRB- cord-048471-7jszm1nd 169 9 were be VBD cord-048471-7jszm1nd 169 10 analysed analyse VBN cord-048471-7jszm1nd 169 11 by by IN cord-048471-7jszm1nd 169 12 SDS SDS NNP cord-048471-7jszm1nd 169 13 - - HYPH cord-048471-7jszm1nd 169 14 PAGE PAGE NNP cord-048471-7jszm1nd 169 15 . . . cord-048471-7jszm1nd 170 1 Gels gel NNS cord-048471-7jszm1nd 170 2 were be VBD cord-048471-7jszm1nd 170 3 stained stain VBN cord-048471-7jszm1nd 170 4 and and CC cord-048471-7jszm1nd 170 5 prepared prepare VBN cord-048471-7jszm1nd 170 6 for for IN cord-048471-7jszm1nd 170 7 autoradiography autoradiography NNP cord-048471-7jszm1nd 170 8 by by IN cord-048471-7jszm1nd 170 9 incubating incubate VBG cord-048471-7jszm1nd 170 10 for for IN cord-048471-7jszm1nd 170 11 30 30 CD cord-048471-7jszm1nd 170 12 min min NN cord-048471-7jszm1nd 170 13 in in IN cord-048471-7jszm1nd 170 14 a a DT cord-048471-7jszm1nd 170 15 solution solution NN cord-048471-7jszm1nd 170 16 containing contain VBG cord-048471-7jszm1nd 170 17 32 32 CD cord-048471-7jszm1nd 170 18 g g NN cord-048471-7jszm1nd 170 19 sodium sodium NN cord-048471-7jszm1nd 170 20 salicylate salicylate NN cord-048471-7jszm1nd 170 21 , , , cord-048471-7jszm1nd 170 22 100 100 CD cord-048471-7jszm1nd 170 23 ml ml NN cord-048471-7jszm1nd 170 24 methanol methanol NN cord-048471-7jszm1nd 170 25 and and CC cord-048471-7jszm1nd 170 26 100 100 CD cord-048471-7jszm1nd 170 27 ml ml NN cord-048471-7jszm1nd 171 1 dH dH NNP cord-048471-7jszm1nd 171 2 2 2 CD cord-048471-7jszm1nd 171 3 O. O. NNP cord-048471-7jszm1nd 171 4 Gels Gels NNPS cord-048471-7jszm1nd 171 5 were be VBD cord-048471-7jszm1nd 171 6 dried dry VBN cord-048471-7jszm1nd 171 7 under under IN cord-048471-7jszm1nd 171 8 vacuum vacuum NN cord-048471-7jszm1nd 171 9 and and CC cord-048471-7jszm1nd 171 10 the the DT cord-048471-7jszm1nd 171 11 reaction reaction NN cord-048471-7jszm1nd 171 12 products product NNS cord-048471-7jszm1nd 171 13 were be VBD cord-048471-7jszm1nd 171 14 detected detect VBN cord-048471-7jszm1nd 171 15 by by IN cord-048471-7jszm1nd 171 16 exposure exposure NN cord-048471-7jszm1nd 171 17 to to IN cord-048471-7jszm1nd 171 18 Kodak Kodak NNP cord-048471-7jszm1nd 171 19 X X NNP cord-048471-7jszm1nd 171 20 - - HYPH cord-048471-7jszm1nd 171 21 Omat Omat NNP cord-048471-7jszm1nd 171 22 scientific scientific JJ cord-048471-7jszm1nd 171 23 imaging imaging NN cord-048471-7jszm1nd 171 24 film film NN cord-048471-7jszm1nd 171 25 ( ( -LRB- cord-048471-7jszm1nd 171 26 Sigma Sigma NNP cord-048471-7jszm1nd 171 27 ) ) -RRB- cord-048471-7jszm1nd 171 28 at at IN cord-048471-7jszm1nd 171 29 270uC 270uc NN cord-048471-7jszm1nd 171 30 for for IN cord-048471-7jszm1nd 171 31 16 16 CD cord-048471-7jszm1nd 171 32 hr hr NN cord-048471-7jszm1nd 171 33 followed follow VBN cord-048471-7jszm1nd 171 34 by by IN cord-048471-7jszm1nd 171 35 developing develop VBG cord-048471-7jszm1nd 171 36 using use VBG cord-048471-7jszm1nd 171 37 a a DT cord-048471-7jszm1nd 171 38 Kodak Kodak NNP cord-048471-7jszm1nd 171 39 automated automate VBN cord-048471-7jszm1nd 171 40 developer developer NN cord-048471-7jszm1nd 171 41 . . . cord-048471-7jszm1nd 172 1 Specific specific JJ cord-048471-7jszm1nd 172 2 V5-tagged v5-tagge VBN cord-048471-7jszm1nd 172 3 proteins protein NNS cord-048471-7jszm1nd 172 4 synthesised synthesise VBN cord-048471-7jszm1nd 172 5 by by IN cord-048471-7jszm1nd 172 6 TNTH TNTH NNS cord-048471-7jszm1nd 172 7 were be VBD cord-048471-7jszm1nd 172 8 precipitated precipitate VBN cord-048471-7jszm1nd 172 9 from from IN cord-048471-7jszm1nd 172 10 5 5 CD cord-048471-7jszm1nd 172 11 - - SYM cord-048471-7jszm1nd 172 12 10 10 CD cord-048471-7jszm1nd 172 13 ml ml NNS cord-048471-7jszm1nd 172 14 of of IN cord-048471-7jszm1nd 172 15 reaction reaction NN cord-048471-7jszm1nd 172 16 product product NN cord-048471-7jszm1nd 172 17 using use VBG cord-048471-7jszm1nd 172 18 the the DT cord-048471-7jszm1nd 172 19 anti anti JJ cord-048471-7jszm1nd 172 20 - - JJ cord-048471-7jszm1nd 172 21 V5 v5 JJ cord-048471-7jszm1nd 172 22 monoclonal monoclonal JJ cord-048471-7jszm1nd 172 23 antibody antibody NN cord-048471-7jszm1nd 172 24 ( ( -LRB- cord-048471-7jszm1nd 172 25 Invitrogen Invitrogen NNP cord-048471-7jszm1nd 172 26 ) ) -RRB- cord-048471-7jszm1nd 172 27 at at IN cord-048471-7jszm1nd 172 28 the the DT cord-048471-7jszm1nd 172 29 recommended recommend VBN cord-048471-7jszm1nd 172 30 dilution dilution NN cord-048471-7jszm1nd 172 31 in in IN cord-048471-7jszm1nd 172 32 600 600 CD cord-048471-7jszm1nd 172 33 ml ml NNS cord-048471-7jszm1nd 172 34 of of IN cord-048471-7jszm1nd 172 35 16 16 CD cord-048471-7jszm1nd 172 36 RIPA RIPA NNP cord-048471-7jszm1nd 172 37 buffer buffer NN cord-048471-7jszm1nd 172 38 ( ( -LRB- cord-048471-7jszm1nd 172 39 diluted dilute VBN cord-048471-7jszm1nd 172 40 from from IN cord-048471-7jszm1nd 172 41 10x 10x CD cord-048471-7jszm1nd 172 42 stock stock NN cord-048471-7jszm1nd 172 43 : : : cord-048471-7jszm1nd 172 44 10 10 CD cord-048471-7jszm1nd 172 45 mM mM NNP cord-048471-7jszm1nd 172 46 Tris Tris NNP cord-048471-7jszm1nd 172 47 - - HYPH cord-048471-7jszm1nd 172 48 HCl HCl NNP cord-048471-7jszm1nd 172 49 ( ( -LRB- cord-048471-7jszm1nd 172 50 pH pH NNP cord-048471-7jszm1nd 172 51 7.5 7.5 CD cord-048471-7jszm1nd 172 52 ) ) -RRB- cord-048471-7jszm1nd 172 53 , , , cord-048471-7jszm1nd 172 54 1 1 CD cord-048471-7jszm1nd 172 55 mM mm CD cord-048471-7jszm1nd 172 56 EDTA EDTA NNP cord-048471-7jszm1nd 172 57 , , , cord-048471-7jszm1nd 172 58 0.15 0.15 CD cord-048471-7jszm1nd 172 59 mM mm CD cord-048471-7jszm1nd 172 60 NaCl nacl NN cord-048471-7jszm1nd 172 61 , , , cord-048471-7jszm1nd 172 62 0.1 0.1 CD cord-048471-7jszm1nd 172 63 % % NN cord-048471-7jszm1nd 172 64 SDS SDS NNP cord-048471-7jszm1nd 172 65 , , , cord-048471-7jszm1nd 172 66 0.5 0.5 CD cord-048471-7jszm1nd 172 67 % % NN cord-048471-7jszm1nd 172 68 Empigen Empigen NNP cord-048471-7jszm1nd 172 69 BB BB NNP cord-048471-7jszm1nd 172 70 , , , cord-048471-7jszm1nd 172 71 0.1 0.1 CD cord-048471-7jszm1nd 172 72 mM mm CD cord-048471-7jszm1nd 172 73 phenylmethylsulphonylfluoride phenylmethylsulphonylfluoride NN cord-048471-7jszm1nd 172 74 ) ) -RRB- cord-048471-7jszm1nd 172 75 for for IN cord-048471-7jszm1nd 172 76 1 1 CD cord-048471-7jszm1nd 172 77 hr hr NN cord-048471-7jszm1nd 172 78 at at IN cord-048471-7jszm1nd 172 79 37uC. 37uc. CD cord-048471-7jszm1nd 173 1 This this DT cord-048471-7jszm1nd 173 2 was be VBD cord-048471-7jszm1nd 173 3 followed follow VBN cord-048471-7jszm1nd 173 4 by by IN cord-048471-7jszm1nd 173 5 a a DT cord-048471-7jszm1nd 173 6 second second JJ cord-048471-7jszm1nd 173 7 incubation incubation NN cord-048471-7jszm1nd 173 8 of of IN cord-048471-7jszm1nd 173 9 tube tube NN cord-048471-7jszm1nd 173 10 for for IN cord-048471-7jszm1nd 173 11 2 2 CD cord-048471-7jszm1nd 173 12 hr hr NN cord-048471-7jszm1nd 173 13 rotating rotate VBG cord-048471-7jszm1nd 173 14 at at IN cord-048471-7jszm1nd 173 15 room room NN cord-048471-7jszm1nd 173 16 temperature temperature NN cord-048471-7jszm1nd 173 17 with with IN cord-048471-7jszm1nd 173 18 goat goat NN cord-048471-7jszm1nd 173 19 anti anti JJ cord-048471-7jszm1nd 173 20 - - JJ cord-048471-7jszm1nd 173 21 mouse mouse JJ cord-048471-7jszm1nd 173 22 immunoglobulin immunoglobulin NN cord-048471-7jszm1nd 173 23 G g NN cord-048471-7jszm1nd 173 24 agarose agarose NN cord-048471-7jszm1nd 173 25 beads bead NNS cord-048471-7jszm1nd 173 26 ( ( -LRB- cord-048471-7jszm1nd 173 27 Sigma Sigma NNP cord-048471-7jszm1nd 173 28 ) ) -RRB- cord-048471-7jszm1nd 173 29 to to TO cord-048471-7jszm1nd 173 30 absorb absorb VB cord-048471-7jszm1nd 173 31 the the DT cord-048471-7jszm1nd 173 32 immune immune JJ cord-048471-7jszm1nd 173 33 complexes complex NNS cord-048471-7jszm1nd 173 34 . . . cord-048471-7jszm1nd 174 1 The the DT cord-048471-7jszm1nd 174 2 beads bead NNS cord-048471-7jszm1nd 174 3 were be VBD cord-048471-7jszm1nd 174 4 washed wash VBN cord-048471-7jszm1nd 174 5 three three CD cord-048471-7jszm1nd 174 6 times time NNS cord-048471-7jszm1nd 174 7 with with IN cord-048471-7jszm1nd 174 8 500 500 CD cord-048471-7jszm1nd 174 9 ml ml NN cord-048471-7jszm1nd 174 10 16 16 CD cord-048471-7jszm1nd 174 11 RIPA RIPA NNP cord-048471-7jszm1nd 174 12 buffer buffer NN cord-048471-7jszm1nd 174 13 and and CC cord-048471-7jszm1nd 174 14 once once RB cord-048471-7jszm1nd 174 15 with with IN cord-048471-7jszm1nd 174 16 500 500 CD cord-048471-7jszm1nd 174 17 ml ml NN cord-048471-7jszm1nd 174 18 PBS PBS NNP cord-048471-7jszm1nd 174 19 . . . cord-048471-7jszm1nd 175 1 The the DT cord-048471-7jszm1nd 175 2 beads bead NNS cord-048471-7jszm1nd 175 3 were be VBD cord-048471-7jszm1nd 175 4 resuspended resuspend VBN cord-048471-7jszm1nd 175 5 in in IN cord-048471-7jszm1nd 175 6 sample sample NN cord-048471-7jszm1nd 175 7 buffer buffer NN cord-048471-7jszm1nd 175 8 for for IN cord-048471-7jszm1nd 175 9 analysis analysis NN cord-048471-7jszm1nd 175 10 by by IN cord-048471-7jszm1nd 175 11 SDS SDS NNP cord-048471-7jszm1nd 175 12 - - HYPH cord-048471-7jszm1nd 175 13 PAGE PAGE NNP cord-048471-7jszm1nd 175 14 and and CC cord-048471-7jszm1nd 175 15 autoradiography autoradiography NN cord-048471-7jszm1nd 175 16 as as IN cord-048471-7jszm1nd 175 17 before before RB cord-048471-7jszm1nd 175 18 . . . cord-048471-7jszm1nd 176 1 Endotoxin endotoxin NN cord-048471-7jszm1nd 176 2 - - HYPH cord-048471-7jszm1nd 176 3 free free JJ cord-048471-7jszm1nd 176 4 preparations preparation NNS cord-048471-7jszm1nd 176 5 of of IN cord-048471-7jszm1nd 176 6 plasmid plasmid NN cord-048471-7jszm1nd 176 7 DNA DNA NNP cord-048471-7jszm1nd 176 8 were be VBD cord-048471-7jszm1nd 176 9 prepared prepare VBN cord-048471-7jszm1nd 176 10 using use VBG cord-048471-7jszm1nd 176 11 the the DT cord-048471-7jszm1nd 176 12 GenElute GenElute NNP cord-048471-7jszm1nd 176 13 TM TM NNP cord-048471-7jszm1nd 176 14 Endotoxin Endotoxin NNP cord-048471-7jszm1nd 176 15 free free JJ cord-048471-7jszm1nd 176 16 plasmid plasmid NN cord-048471-7jszm1nd 176 17 midi midi NNP cord-048471-7jszm1nd 176 18 prep prep NNP cord-048471-7jszm1nd 176 19 kit kit NNP cord-048471-7jszm1nd 176 20 ( ( -LRB- cord-048471-7jszm1nd 176 21 Sigma Sigma NNP cord-048471-7jszm1nd 176 22 ) ) -RRB- cord-048471-7jszm1nd 176 23 . . . cord-048471-7jszm1nd 177 1 Crandall Crandall NNP cord-048471-7jszm1nd 177 2 - - HYPH cord-048471-7jszm1nd 177 3 Reese Reese NNP cord-048471-7jszm1nd 177 4 Feline Feline NNP cord-048471-7jszm1nd 177 5 Kidney kidney NN cord-048471-7jszm1nd 177 6 cells cell NNS cord-048471-7jszm1nd 177 7 ( ( -LRB- cord-048471-7jszm1nd 177 8 CRFKs crfk NNS cord-048471-7jszm1nd 177 9 ) ) -RRB- cord-048471-7jszm1nd 177 10 were be VBD cord-048471-7jszm1nd 177 11 seeded seed VBN cord-048471-7jszm1nd 177 12 into into IN cord-048471-7jszm1nd 177 13 a a DT cord-048471-7jszm1nd 177 14 12 12 CD cord-048471-7jszm1nd 177 15 well well NN cord-048471-7jszm1nd 177 16 tray tray NN cord-048471-7jszm1nd 177 17 at at IN cord-048471-7jszm1nd 177 18 approximately approximately RB cord-048471-7jszm1nd 177 19 40 40 CD cord-048471-7jszm1nd 177 20 - - SYM cord-048471-7jszm1nd 177 21 50 50 CD cord-048471-7jszm1nd 177 22 % % NN cord-048471-7jszm1nd 177 23 confluence confluence NN cord-048471-7jszm1nd 177 24 . . . cord-048471-7jszm1nd 178 1 CRFK CRFK NNP cord-048471-7jszm1nd 178 2 cells cell NNS cord-048471-7jszm1nd 178 3 were be VBD cord-048471-7jszm1nd 178 4 transfected transfecte VBN cord-048471-7jszm1nd 178 5 with with IN cord-048471-7jszm1nd 178 6 no no DT cord-048471-7jszm1nd 178 7 DNA dna NN cord-048471-7jszm1nd 178 8 ( ( -LRB- cord-048471-7jszm1nd 178 9 negative negative JJ cord-048471-7jszm1nd 178 10 control control NN cord-048471-7jszm1nd 178 11 ) ) -RRB- cord-048471-7jszm1nd 178 12 , , , cord-048471-7jszm1nd 178 13 pSV pSV NNP cord-048471-7jszm1nd 178 14 - - HYPH cord-048471-7jszm1nd 178 15 b b NNP cord-048471-7jszm1nd 178 16 - - : cord-048471-7jszm1nd 178 17 Gal gal NN cord-048471-7jszm1nd 178 18 ( ( -LRB- cord-048471-7jszm1nd 178 19 control control NN cord-048471-7jszm1nd 178 20 for for IN cord-048471-7jszm1nd 178 21 b b NN cord-048471-7jszm1nd 178 22 - - HYPH cord-048471-7jszm1nd 178 23 galactosidase galactosidase NN cord-048471-7jszm1nd 178 24 activity activity NN cord-048471-7jszm1nd 178 25 ) ) -RRB- cord-048471-7jszm1nd 178 26 , , , cord-048471-7jszm1nd 178 27 pEGFP pEGFP NNP cord-048471-7jszm1nd 178 28 - - HYPH cord-048471-7jszm1nd 178 29 C1 C1 NNP cord-048471-7jszm1nd 178 30 / / SYM cord-048471-7jszm1nd 178 31 JV JV NNP cord-048471-7jszm1nd 178 32 59 59 CD cord-048471-7jszm1nd 178 33 GS GS NNP cord-048471-7jszm1nd 178 34 / / SYM cord-048471-7jszm1nd 178 35 lacZ lacZ NNP cord-048471-7jszm1nd 178 36 and and CC cord-048471-7jszm1nd 178 37 pEGFP pEGFP NNP cord-048471-7jszm1nd 178 38 - - HYPH cord-048471-7jszm1nd 178 39 C1 C1 NNP cord-048471-7jszm1nd 178 40 / / SYM cord-048471-7jszm1nd 178 41 IRES IRES NNP cord-048471-7jszm1nd 178 42 / / SYM cord-048471-7jszm1nd 178 43 lacZ lacz XX cord-048471-7jszm1nd 179 1 ( ( -LRB- cord-048471-7jszm1nd 179 2 control control NN cord-048471-7jszm1nd 179 3 for for IN cord-048471-7jszm1nd 179 4 IRES ires JJ cord-048471-7jszm1nd 179 5 activity activity NN cord-048471-7jszm1nd 179 6 ) ) -RRB- cord-048471-7jszm1nd 179 7 using use VBG cord-048471-7jszm1nd 179 8 the the DT cord-048471-7jszm1nd 179 9 Superfect Superfect NNP cord-048471-7jszm1nd 179 10 TM TM NNP cord-048471-7jszm1nd 179 11 transfection transfection NN cord-048471-7jszm1nd 179 12 reagent reagent NN cord-048471-7jszm1nd 179 13 ( ( -LRB- cord-048471-7jszm1nd 179 14 Qiagen Qiagen NNP cord-048471-7jszm1nd 179 15 ) ) -RRB- cord-048471-7jszm1nd 179 16 as as IN cord-048471-7jszm1nd 179 17 per per IN cord-048471-7jszm1nd 179 18 the the DT cord-048471-7jszm1nd 179 19 manufacturer manufacturer NN cord-048471-7jszm1nd 179 20 's 's POS cord-048471-7jszm1nd 179 21 recommendations recommendation NNS cord-048471-7jszm1nd 179 22 . . . cord-048471-7jszm1nd 180 1 Following follow VBG cord-048471-7jszm1nd 180 2 a a DT cord-048471-7jszm1nd 180 3 16 16 CD cord-048471-7jszm1nd 180 4 hour hour NN cord-048471-7jszm1nd 180 5 incubation incubation NN cord-048471-7jszm1nd 180 6 the the DT cord-048471-7jszm1nd 180 7 cells cell NNS cord-048471-7jszm1nd 180 8 were be VBD cord-048471-7jszm1nd 180 9 observed observe VBN cord-048471-7jszm1nd 180 10 for for IN cord-048471-7jszm1nd 180 11 EGFP EGFP NNP cord-048471-7jszm1nd 180 12 expression expression NN cord-048471-7jszm1nd 180 13 using use VBG cord-048471-7jszm1nd 180 14 a a DT cord-048471-7jszm1nd 180 15 Leica Leica NNP cord-048471-7jszm1nd 180 16 Leitz Leitz NNP cord-048471-7jszm1nd 180 17 DMRB DMRB NNP cord-048471-7jszm1nd 180 18 fluorescence fluorescence NN cord-048471-7jszm1nd 180 19 microscope microscope NN cord-048471-7jszm1nd 180 20 . . . cord-048471-7jszm1nd 181 1 The the DT cord-048471-7jszm1nd 181 2 cells cell NNS cord-048471-7jszm1nd 181 3 were be VBD cord-048471-7jszm1nd 181 4 washed wash VBN cord-048471-7jszm1nd 181 5 in in IN cord-048471-7jszm1nd 181 6 PBS PBS NNP cord-048471-7jszm1nd 181 7 and and CC cord-048471-7jszm1nd 181 8 fixed fix VBN cord-048471-7jszm1nd 181 9 using use VBG cord-048471-7jszm1nd 181 10 a a DT cord-048471-7jszm1nd 181 11 0.5 0.5 CD cord-048471-7jszm1nd 181 12 % % NN cord-048471-7jszm1nd 181 13 solution solution NN cord-048471-7jszm1nd 181 14 of of IN cord-048471-7jszm1nd 181 15 glutaraldehyde glutaraldehyde NN cord-048471-7jszm1nd 181 16 for for IN cord-048471-7jszm1nd 181 17 30 30 CD cord-048471-7jszm1nd 181 18 min min NN cord-048471-7jszm1nd 181 19 at at IN cord-048471-7jszm1nd 181 20 room room NN cord-048471-7jszm1nd 181 21 temperature temperature NN cord-048471-7jszm1nd 181 22 . . . cord-048471-7jszm1nd 182 1 The the DT cord-048471-7jszm1nd 182 2 cells cell NNS cord-048471-7jszm1nd 182 3 were be VBD cord-048471-7jszm1nd 182 4 incubated incubate VBN cord-048471-7jszm1nd 182 5 with with IN cord-048471-7jszm1nd 182 6 an an DT cord-048471-7jszm1nd 182 7 X X NNP cord-048471-7jszm1nd 182 8 - - HYPH cord-048471-7jszm1nd 182 9 Gal gal NN cord-048471-7jszm1nd 182 10 stain stain NN cord-048471-7jszm1nd 182 11 solution solution NN cord-048471-7jszm1nd 182 12 : : : cord-048471-7jszm1nd 182 13 5 5 CD cord-048471-7jszm1nd 182 14 mM mm CD cord-048471-7jszm1nd 182 15 K k NN cord-048471-7jszm1nd 182 16 3 3 CD cord-048471-7jszm1nd 182 17 Fe(CN fe(cn NN cord-048471-7jszm1nd 182 18 ) ) -RRB- cord-048471-7jszm1nd 182 19 6 6 CD cord-048471-7jszm1nd 182 20 , , , cord-048471-7jszm1nd 182 21 5 5 CD cord-048471-7jszm1nd 182 22 mM mm CD cord-048471-7jszm1nd 182 23 K k NN cord-048471-7jszm1nd 182 24 4 4 CD cord-048471-7jszm1nd 182 25 Fe(CN fe(cn NN cord-048471-7jszm1nd 182 26 ) ) -RRB- cord-048471-7jszm1nd 182 27 6 6 CD cord-048471-7jszm1nd 182 28 , , , cord-048471-7jszm1nd 182 29 2 2 CD cord-048471-7jszm1nd 182 30 mM mm CD cord-048471-7jszm1nd 182 31 MgCl MgCl NNP cord-048471-7jszm1nd 182 32 2 2 CD cord-048471-7jszm1nd 182 33 , , , cord-048471-7jszm1nd 182 34 1x 1x CD cord-048471-7jszm1nd 182 35 X x NN cord-048471-7jszm1nd 182 36 - - NN cord-048471-7jszm1nd 182 37 Gal Gal NNP cord-048471-7jszm1nd 182 38 ( ( -LRB- cord-048471-7jszm1nd 182 39 Sigma Sigma NNP cord-048471-7jszm1nd 182 40 ) ) -RRB- cord-048471-7jszm1nd 182 41 for for IN cord-048471-7jszm1nd 182 42 4 4 CD cord-048471-7jszm1nd 182 43 hours hour NNS cord-048471-7jszm1nd 182 44 at at IN cord-048471-7jszm1nd 182 45 37uC 37uc CD cord-048471-7jszm1nd 182 46 and and CC cord-048471-7jszm1nd 182 47 were be VBD cord-048471-7jszm1nd 182 48 observed observe VBN cord-048471-7jszm1nd 182 49 for for IN cord-048471-7jszm1nd 182 50 b b NN cord-048471-7jszm1nd 182 51 - - HYPH cord-048471-7jszm1nd 182 52 glactosidase glactosidase JJ cord-048471-7jszm1nd 182 53 activity activity NN cord-048471-7jszm1nd 182 54 by by IN cord-048471-7jszm1nd 182 55 light light JJ cord-048471-7jszm1nd 182 56 microscopy microscopy NNS cord-048471-7jszm1nd 182 57 . . . cord-048471-7jszm1nd 183 1 The the DT cord-048471-7jszm1nd 183 2 experiment experiment NN cord-048471-7jszm1nd 183 3 was be VBD cord-048471-7jszm1nd 183 4 performed perform VBN cord-048471-7jszm1nd 183 5 more more RBR cord-048471-7jszm1nd 183 6 than than IN cord-048471-7jszm1nd 183 7 once once RB cord-048471-7jszm1nd 183 8 to to TO cord-048471-7jszm1nd 183 9 confirm confirm VB cord-048471-7jszm1nd 183 10 the the DT cord-048471-7jszm1nd 183 11 results result NNS cord-048471-7jszm1nd 183 12 . . . cord-048471-7jszm1nd 184 1 JV JV NNP cord-048471-7jszm1nd 184 2 V5 V5 NNP cord-048471-7jszm1nd 184 3 and and CC cord-048471-7jszm1nd 184 4 JV JV NNP cord-048471-7jszm1nd 184 5 FLC FLC NNP cord-048471-7jszm1nd 184 6 T7 T7 NNP cord-048471-7jszm1nd 184 7 cDNA cdna NN cord-048471-7jszm1nd 184 8 plasmid plasmid NN cord-048471-7jszm1nd 184 9 constructs construct NNS cord-048471-7jszm1nd 184 10 were be VBD cord-048471-7jszm1nd 184 11 linearised linearise VBN cord-048471-7jszm1nd 184 12 using use VBG cord-048471-7jszm1nd 184 13 NdeI NdeI NNP cord-048471-7jszm1nd 184 14 ( ( -LRB- cord-048471-7jszm1nd 184 15 Invitrogen Invitrogen NNP cord-048471-7jszm1nd 184 16 ) ) -RRB- cord-048471-7jszm1nd 184 17 . . . cord-048471-7jszm1nd 185 1 Capped Capped NNP cord-048471-7jszm1nd 185 2 RNA RNA NNP cord-048471-7jszm1nd 185 3 was be VBD cord-048471-7jszm1nd 185 4 synthesised synthesise VBN cord-048471-7jszm1nd 185 5 using use VBG cord-048471-7jszm1nd 185 6 the the DT cord-048471-7jszm1nd 185 7 mMessage mMessage NNP cord-048471-7jszm1nd 185 8 mMachineH mMachineH HYPH cord-048471-7jszm1nd 185 9 Capped cap VBN cord-048471-7jszm1nd 185 10 RNA RNA NNP cord-048471-7jszm1nd 185 11 Transcription Transcription NNP cord-048471-7jszm1nd 185 12 kit kit NN cord-048471-7jszm1nd 185 13 ( ( -LRB- cord-048471-7jszm1nd 185 14 Ambion Ambion NNP cord-048471-7jszm1nd 185 15 ) ) -RRB- cord-048471-7jszm1nd 185 16 according accord VBG cord-048471-7jszm1nd 185 17 to to IN cord-048471-7jszm1nd 185 18 the the DT cord-048471-7jszm1nd 185 19 manufacturer manufacturer NN cord-048471-7jszm1nd 185 20 's 's POS cord-048471-7jszm1nd 185 21 instructions instruction NNS cord-048471-7jszm1nd 185 22 . . . cord-048471-7jszm1nd 186 1 CRFK CRFK NNP cord-048471-7jszm1nd 186 2 cells cell NNS cord-048471-7jszm1nd 186 3 were be VBD cord-048471-7jszm1nd 186 4 seeded seed VBN cord-048471-7jszm1nd 186 5 into into IN cord-048471-7jszm1nd 186 6 6 6 CD cord-048471-7jszm1nd 186 7 well well NN cord-048471-7jszm1nd 186 8 trays tray NNS cord-048471-7jszm1nd 186 9 at at IN cord-048471-7jszm1nd 186 10 approximately approximately RB cord-048471-7jszm1nd 186 11 50 50 CD cord-048471-7jszm1nd 186 12 % % NN cord-048471-7jszm1nd 186 13 confluence confluence NN cord-048471-7jszm1nd 186 14 and and CC cord-048471-7jszm1nd 186 15 were be VBD cord-048471-7jszm1nd 186 16 transfected transfecte VBN cord-048471-7jszm1nd 186 17 with with IN cord-048471-7jszm1nd 186 18 2 2 CD cord-048471-7jszm1nd 186 19 mg mg NNP cord-048471-7jszm1nd 186 20 purified purify VBN cord-048471-7jszm1nd 186 21 RNA RNA NNP cord-048471-7jszm1nd 186 22 per per IN cord-048471-7jszm1nd 186 23 well well RB cord-048471-7jszm1nd 186 24 using use VBG cord-048471-7jszm1nd 186 25 Transmessenger Transmessenger NNP cord-048471-7jszm1nd 186 26 transfection transfection NN cord-048471-7jszm1nd 186 27 reagent reagent NN cord-048471-7jszm1nd 186 28 ( ( -LRB- cord-048471-7jszm1nd 186 29 Qiagen Qiagen NNP cord-048471-7jszm1nd 186 30 ) ) -RRB- cord-048471-7jszm1nd 186 31 according accord VBG cord-048471-7jszm1nd 186 32 to to IN cord-048471-7jszm1nd 186 33 the the DT cord-048471-7jszm1nd 186 34 manufacturer manufacturer NN cord-048471-7jszm1nd 186 35 's 's POS cord-048471-7jszm1nd 186 36 instructions instruction NNS cord-048471-7jszm1nd 186 37 . . . cord-048471-7jszm1nd 187 1 For for IN cord-048471-7jszm1nd 187 2 immunofluorescence immunofluorescence NN cord-048471-7jszm1nd 187 3 CRFK CRFK NNP cord-048471-7jszm1nd 187 4 cells cell NNS cord-048471-7jszm1nd 187 5 were be VBD cord-048471-7jszm1nd 187 6 seeded seed VBN cord-048471-7jszm1nd 187 7 onto onto IN cord-048471-7jszm1nd 187 8 19 19 CD cord-048471-7jszm1nd 187 9 mm mm NN cord-048471-7jszm1nd 187 10 coverslips coverslip NNS cord-048471-7jszm1nd 187 11 in in IN cord-048471-7jszm1nd 187 12 6 6 CD cord-048471-7jszm1nd 187 13 well well NN cord-048471-7jszm1nd 187 14 trays tray NNS cord-048471-7jszm1nd 187 15 and and CC cord-048471-7jszm1nd 187 16 were be VBD cord-048471-7jszm1nd 187 17 transfected transfecte VBN cord-048471-7jszm1nd 187 18 with with IN cord-048471-7jszm1nd 187 19 RNA RNA NNP cord-048471-7jszm1nd 187 20 as as IN cord-048471-7jszm1nd 187 21 described describe VBN cord-048471-7jszm1nd 187 22 . . . cord-048471-7jszm1nd 188 1 Following follow VBG cord-048471-7jszm1nd 188 2 a a DT cord-048471-7jszm1nd 188 3 24 24 CD cord-048471-7jszm1nd 188 4 hr hr NN cord-048471-7jszm1nd 188 5 incubation incubation NN cord-048471-7jszm1nd 188 6 the the DT cord-048471-7jszm1nd 188 7 coverslips coverslip NNS cord-048471-7jszm1nd 188 8 were be VBD cord-048471-7jszm1nd 188 9 washed wash VBN cord-048471-7jszm1nd 188 10 with with IN cord-048471-7jszm1nd 188 11 PBS PBS NNP cord-048471-7jszm1nd 188 12 and and CC cord-048471-7jszm1nd 188 13 fixed fix VBN cord-048471-7jszm1nd 188 14 in in IN cord-048471-7jszm1nd 188 15 4 4 CD cord-048471-7jszm1nd 188 16 % % NN cord-048471-7jszm1nd 188 17 formaldehyde formaldehyde NN cord-048471-7jszm1nd 188 18 for for IN cord-048471-7jszm1nd 188 19 15 15 CD cord-048471-7jszm1nd 188 20 min min NN cord-048471-7jszm1nd 188 21 at at IN cord-048471-7jszm1nd 188 22 room room NN cord-048471-7jszm1nd 188 23 temperature temperature NN cord-048471-7jszm1nd 188 24 . . . cord-048471-7jszm1nd 189 1 Cells cell NNS cord-048471-7jszm1nd 189 2 were be VBD cord-048471-7jszm1nd 189 3 permeabilised permeabilise VBN cord-048471-7jszm1nd 189 4 and and CC cord-048471-7jszm1nd 189 5 blocked block VBN cord-048471-7jszm1nd 189 6 in in IN cord-048471-7jszm1nd 189 7 saponin saponin NN cord-048471-7jszm1nd 189 8 buffer buffer NN cord-048471-7jszm1nd 189 9 , , , cord-048471-7jszm1nd 189 10 also also RB cord-048471-7jszm1nd 189 11 used use VBN cord-048471-7jszm1nd 189 12 as as IN cord-048471-7jszm1nd 189 13 staining stain VBG cord-048471-7jszm1nd 189 14 buffer buffer NN cord-048471-7jszm1nd 189 15 , , , cord-048471-7jszm1nd 189 16 ( ( -LRB- cord-048471-7jszm1nd 189 17 0.1 0.1 CD cord-048471-7jszm1nd 189 18 % % NN cord-048471-7jszm1nd 189 19 saponin saponin NN cord-048471-7jszm1nd 189 20 , , , cord-048471-7jszm1nd 189 21 10 10 CD cord-048471-7jszm1nd 189 22 % % NN cord-048471-7jszm1nd 189 23 foetal foetal JJ cord-048471-7jszm1nd 189 24 calf calf NN cord-048471-7jszm1nd 189 25 serum serum NN cord-048471-7jszm1nd 189 26 , , , cord-048471-7jszm1nd 189 27 0.1 0.1 CD cord-048471-7jszm1nd 189 28 % % NN cord-048471-7jszm1nd 189 29 sodium sodium NN cord-048471-7jszm1nd 189 30 azide azide NN cord-048471-7jszm1nd 189 31 ) ) -RRB- cord-048471-7jszm1nd 189 32 for for IN cord-048471-7jszm1nd 189 33 1 1 CD cord-048471-7jszm1nd 189 34 hr hr NN cord-048471-7jszm1nd 189 35 at at IN cord-048471-7jszm1nd 189 36 4uC. 4uc. CD cord-048471-7jszm1nd 189 37 Cells cell NNS cord-048471-7jszm1nd 189 38 were be VBD cord-048471-7jszm1nd 189 39 stained stain VBN cord-048471-7jszm1nd 189 40 using use VBG cord-048471-7jszm1nd 189 41 an an DT cord-048471-7jszm1nd 189 42 anti anti JJ cord-048471-7jszm1nd 189 43 - - JJ cord-048471-7jszm1nd 189 44 V5 v5 JJ cord-048471-7jszm1nd 189 45 monoclonal monoclonal JJ cord-048471-7jszm1nd 189 46 antibody antibody NN cord-048471-7jszm1nd 189 47 ( ( -LRB- cord-048471-7jszm1nd 189 48 Invitrogen Invitrogen NNP cord-048471-7jszm1nd 189 49 ) ) -RRB- cord-048471-7jszm1nd 189 50 followed follow VBN cord-048471-7jszm1nd 189 51 by by IN cord-048471-7jszm1nd 189 52 an an DT cord-048471-7jszm1nd 189 53 anti anti JJ cord-048471-7jszm1nd 189 54 - - JJ cord-048471-7jszm1nd 189 55 mouse mouse NN cord-048471-7jszm1nd 189 56 Alexafluor Alexafluor NNP cord-048471-7jszm1nd 189 57 488 488 CD cord-048471-7jszm1nd 189 58 conjugated conjugate VBD cord-048471-7jszm1nd 189 59 secondary secondary JJ cord-048471-7jszm1nd 189 60 antibody antibody NN cord-048471-7jszm1nd 189 61 ( ( -LRB- cord-048471-7jszm1nd 189 62 Molecular Molecular NNP cord-048471-7jszm1nd 189 63 Probes Probes NNPS cord-048471-7jszm1nd 189 64 ) ) -RRB- cord-048471-7jszm1nd 189 65 at at IN cord-048471-7jszm1nd 189 66 the the DT cord-048471-7jszm1nd 189 67 recommended recommend VBN cord-048471-7jszm1nd 189 68 dilution dilution NN cord-048471-7jszm1nd 189 69 in in IN cord-048471-7jszm1nd 189 70 staining stain VBG cord-048471-7jszm1nd 189 71 buffer buffer NN cord-048471-7jszm1nd 189 72 for for IN cord-048471-7jszm1nd 189 73 30 30 CD cord-048471-7jszm1nd 189 74 min min NN cord-048471-7jszm1nd 189 75 in in IN cord-048471-7jszm1nd 189 76 the the DT cord-048471-7jszm1nd 189 77 dark dark NN cord-048471-7jszm1nd 189 78 . . . cord-048471-7jszm1nd 190 1 Cells cell NNS cord-048471-7jszm1nd 190 2 were be VBD cord-048471-7jszm1nd 190 3 then then RB cord-048471-7jszm1nd 190 4 stained stain VBN cord-048471-7jszm1nd 190 5 for for IN cord-048471-7jszm1nd 190 6 30 30 CD cord-048471-7jszm1nd 190 7 min min NN cord-048471-7jszm1nd 190 8 in in IN cord-048471-7jszm1nd 190 9 the the DT cord-048471-7jszm1nd 190 10 dark dark NN cord-048471-7jszm1nd 190 11 with with IN cord-048471-7jszm1nd 190 12 a a DT cord-048471-7jszm1nd 190 13 Wheat Wheat NNP cord-048471-7jszm1nd 190 14 Germ Germ NNP cord-048471-7jszm1nd 190 15 Agglutinin Agglutinin NNP cord-048471-7jszm1nd 190 16 Alexafluor Alexafluor NNP cord-048471-7jszm1nd 190 17 594 594 CD cord-048471-7jszm1nd 190 18 nm nm NN cord-048471-7jszm1nd 190 19 conjugate conjugate NNP cord-048471-7jszm1nd 190 20 ( ( -LRB- cord-048471-7jszm1nd 190 21 Molcular Molcular NNP cord-048471-7jszm1nd 190 22 Probes Probes NNPS cord-048471-7jszm1nd 190 23 ) ) -RRB- cord-048471-7jszm1nd 190 24 to to TO cord-048471-7jszm1nd 190 25 allow allow VB cord-048471-7jszm1nd 190 26 identification identification NN cord-048471-7jszm1nd 190 27 of of IN cord-048471-7jszm1nd 190 28 plasma plasma NN cord-048471-7jszm1nd 190 29 and and CC cord-048471-7jszm1nd 190 30 Golgi Golgi NNP cord-048471-7jszm1nd 190 31 membranes membrane NNS cord-048471-7jszm1nd 190 32 . . . cord-048471-7jszm1nd 191 1 Coverslips coverslip NNS cord-048471-7jszm1nd 191 2 were be VBD cord-048471-7jszm1nd 191 3 washed wash VBN cord-048471-7jszm1nd 191 4 and and CC cord-048471-7jszm1nd 191 5 mounted mount VBN cord-048471-7jszm1nd 191 6 onto onto IN cord-048471-7jszm1nd 191 7 slides slide NNS cord-048471-7jszm1nd 191 8 using use VBG cord-048471-7jszm1nd 191 9 Vectashield Vectashield NNP cord-048471-7jszm1nd 191 10 containing contain VBG cord-048471-7jszm1nd 191 11 DAPI DAPI NNP cord-048471-7jszm1nd 191 12 ( ( -LRB- cord-048471-7jszm1nd 191 13 Vector Vector NNP cord-048471-7jszm1nd 191 14 Labs Labs NNP cord-048471-7jszm1nd 191 15 ) ) -RRB- cord-048471-7jszm1nd 191 16 . . . cord-048471-7jszm1nd 192 1 Microscopy Microscopy NNP cord-048471-7jszm1nd 192 2 was be VBD cord-048471-7jszm1nd 192 3 performed perform VBN cord-048471-7jszm1nd 192 4 using use VBG cord-048471-7jszm1nd 192 5 an an DT cord-048471-7jszm1nd 192 6 inverted inverted JJ cord-048471-7jszm1nd 192 7 Leica Leica NNP cord-048471-7jszm1nd 192 8 TCS TCS NNP cord-048471-7jszm1nd 192 9 - - HYPH cord-048471-7jszm1nd 192 10 NT NT NNP cord-048471-7jszm1nd 192 11 confocal confocal JJ cord-048471-7jszm1nd 192 12 laser laser NN cord-048471-7jszm1nd 192 13 scanning scanning NN cord-048471-7jszm1nd 192 14 microscope microscope NN cord-048471-7jszm1nd 192 15 . . . cord-048471-7jszm1nd 193 1 The the DT cord-048471-7jszm1nd 193 2 anti anti JJ cord-048471-7jszm1nd 193 3 - - JJ cord-048471-7jszm1nd 193 4 V5 v5 JJ cord-048471-7jszm1nd 193 5 antibody antibody NN cord-048471-7jszm1nd 193 6 was be VBD cord-048471-7jszm1nd 193 7 also also RB cord-048471-7jszm1nd 193 8 used use VBN cord-048471-7jszm1nd 193 9 to to TO cord-048471-7jszm1nd 193 10 detect detect VB cord-048471-7jszm1nd 193 11 V5-tagged v5-tagged JJ cord-048471-7jszm1nd 193 12 protein protein NN cord-048471-7jszm1nd 193 13 by by IN cord-048471-7jszm1nd 193 14 Western western JJ cord-048471-7jszm1nd 193 15 blot blot NN cord-048471-7jszm1nd 193 16 . . . cord-048471-7jszm1nd 194 1 Cell cell NN cord-048471-7jszm1nd 194 2 lysates lysate NNS cord-048471-7jszm1nd 194 3 were be VBD cord-048471-7jszm1nd 194 4 prepared prepare VBN cord-048471-7jszm1nd 194 5 following follow VBG cord-048471-7jszm1nd 194 6 transfection transfection NN cord-048471-7jszm1nd 194 7 using use VBG cord-048471-7jszm1nd 194 8 lysis lysis NN cord-048471-7jszm1nd 194 9 buffer buffer NN cord-048471-7jszm1nd 194 10 ( ( -LRB- cord-048471-7jszm1nd 194 11 0.15 0.15 CD cord-048471-7jszm1nd 194 12 M m NN cord-048471-7jszm1nd 194 13 sodium sodium NN cord-048471-7jszm1nd 194 14 chloride chloride NN cord-048471-7jszm1nd 194 15 , , , cord-048471-7jszm1nd 194 16 0.5 0.5 CD cord-048471-7jszm1nd 194 17 % % NN cord-048471-7jszm1nd 194 18 ( ( -LRB- cord-048471-7jszm1nd 194 19 v v NN cord-048471-7jszm1nd 194 20 / / SYM cord-048471-7jszm1nd 194 21 v v NN cord-048471-7jszm1nd 194 22 ) ) -RRB- cord-048471-7jszm1nd 194 23 sodium sodium NN cord-048471-7jszm1nd 194 24 deoxycholate deoxycholate NN cord-048471-7jszm1nd 194 25 , , , cord-048471-7jszm1nd 194 26 0.1 0.1 CD cord-048471-7jszm1nd 194 27 % % NN cord-048471-7jszm1nd 194 28 ( ( -LRB- cord-048471-7jszm1nd 194 29 w w NN cord-048471-7jszm1nd 194 30 / / SYM cord-048471-7jszm1nd 194 31 v v NN cord-048471-7jszm1nd 194 32 ) ) -RRB- cord-048471-7jszm1nd 194 33 SDS SDS NNP cord-048471-7jszm1nd 194 34 , , , cord-048471-7jszm1nd 194 35 50 50 CD cord-048471-7jszm1nd 194 36 mM mM NNP cord-048471-7jszm1nd 194 37 Tris Tris NNP cord-048471-7jszm1nd 194 38 - - HYPH cord-048471-7jszm1nd 194 39 Cl Cl NNP cord-048471-7jszm1nd 194 40 pH pH NNP cord-048471-7jszm1nd 194 41 8.0 8.0 CD cord-048471-7jszm1nd 194 42 ) ) -RRB- cord-048471-7jszm1nd 194 43 and and CC cord-048471-7jszm1nd 194 44 protease protease JJ cord-048471-7jszm1nd 194 45 inhibitor inhibitor NN cord-048471-7jszm1nd 194 46 cocktail cocktail NN cord-048471-7jszm1nd 194 47 ( ( -LRB- cord-048471-7jszm1nd 194 48 Sigma Sigma NNP cord-048471-7jszm1nd 194 49 ) ) -RRB- cord-048471-7jszm1nd 194 50 . . . cord-048471-7jszm1nd 195 1 Lysates Lysates NNP cord-048471-7jszm1nd 195 2 were be VBD cord-048471-7jszm1nd 195 3 incubated incubate VBN cord-048471-7jszm1nd 195 4 for for IN cord-048471-7jszm1nd 195 5 15 15 CD cord-048471-7jszm1nd 195 6 min min NN cord-048471-7jszm1nd 195 7 on on IN cord-048471-7jszm1nd 195 8 ice ice NN cord-048471-7jszm1nd 195 9 followed follow VBN cord-048471-7jszm1nd 195 10 by by IN cord-048471-7jszm1nd 195 11 sonication sonication NN cord-048471-7jszm1nd 195 12 to to TO cord-048471-7jszm1nd 195 13 shear shear VB cord-048471-7jszm1nd 195 14 genomic genomic JJ cord-048471-7jszm1nd 195 15 DNA dna NN cord-048471-7jszm1nd 195 16 . . . cord-048471-7jszm1nd 196 1 Following follow VBG cord-048471-7jszm1nd 196 2 Bradford Bradford NNP cord-048471-7jszm1nd 196 3 analysis analysis NN cord-048471-7jszm1nd 196 4 equal equal VBP cord-048471-7jszm1nd 196 5 protein protein NN cord-048471-7jszm1nd 196 6 content content NN cord-048471-7jszm1nd 196 7 from from IN cord-048471-7jszm1nd 196 8 JV JV NNP cord-048471-7jszm1nd 196 9 V5 V5 NNP cord-048471-7jszm1nd 196 10 and and CC cord-048471-7jszm1nd 196 11 JV JV NNP cord-048471-7jszm1nd 196 12 FLC FLC NNP cord-048471-7jszm1nd 196 13 lysates lysate NNS cord-048471-7jszm1nd 196 14 were be VBD cord-048471-7jszm1nd 196 15 run run VBN cord-048471-7jszm1nd 196 16 on on IN cord-048471-7jszm1nd 196 17 a a DT cord-048471-7jszm1nd 196 18 10 10 CD cord-048471-7jszm1nd 196 19 % % NN cord-048471-7jszm1nd 196 20 SDS sds NN cord-048471-7jszm1nd 196 21 - - HYPH cord-048471-7jszm1nd 196 22 PAGE PAGE NNP cord-048471-7jszm1nd 196 23 gel gel NN cord-048471-7jszm1nd 196 24 and and CC cord-048471-7jszm1nd 196 25 subsequently subsequently RB cord-048471-7jszm1nd 196 26 transferred transfer VBD cord-048471-7jszm1nd 196 27 onto onto IN cord-048471-7jszm1nd 196 28 Immobilon Immobilon NNP cord-048471-7jszm1nd 196 29 - - HYPH cord-048471-7jszm1nd 196 30 P p NN cord-048471-7jszm1nd 196 31 PVDF pvdf NN cord-048471-7jszm1nd 196 32 membrane membrane NN cord-048471-7jszm1nd 196 33 ( ( -LRB- cord-048471-7jszm1nd 196 34 Millipore Millipore NNP cord-048471-7jszm1nd 196 35 ) ) -RRB- cord-048471-7jszm1nd 196 36 according accord VBG cord-048471-7jszm1nd 196 37 to to IN cord-048471-7jszm1nd 196 38 the the DT cord-048471-7jszm1nd 196 39 manufacturer manufacturer NN cord-048471-7jszm1nd 196 40 's 's POS cord-048471-7jszm1nd 196 41 recommendations recommendation NNS cord-048471-7jszm1nd 196 42 . . . cord-048471-7jszm1nd 197 1 The the DT cord-048471-7jszm1nd 197 2 membrane membrane NN cord-048471-7jszm1nd 197 3 was be VBD cord-048471-7jszm1nd 197 4 probed probe VBN cord-048471-7jszm1nd 197 5 using use VBG cord-048471-7jszm1nd 197 6 the the DT cord-048471-7jszm1nd 197 7 anti anti JJ cord-048471-7jszm1nd 197 8 - - JJ cord-048471-7jszm1nd 197 9 V5 v5 JJ cord-048471-7jszm1nd 197 10 monoclonal monoclonal JJ cord-048471-7jszm1nd 197 11 antibody antibody NN cord-048471-7jszm1nd 197 12 at at IN cord-048471-7jszm1nd 197 13 the the DT cord-048471-7jszm1nd 197 14 manufacturer manufacturer NN cord-048471-7jszm1nd 197 15 's 's POS cord-048471-7jszm1nd 197 16 recommended recommend VBN cord-048471-7jszm1nd 197 17 dilution dilution NN cord-048471-7jszm1nd 197 18 , , , cord-048471-7jszm1nd 197 19 followed follow VBN cord-048471-7jszm1nd 197 20 by by IN cord-048471-7jszm1nd 197 21 an an DT cord-048471-7jszm1nd 197 22 anti anti JJ cord-048471-7jszm1nd 197 23 - - JJ cord-048471-7jszm1nd 197 24 mouse mouse JJ cord-048471-7jszm1nd 197 25 HRP HRP NNP cord-048471-7jszm1nd 197 26 - - HYPH cord-048471-7jszm1nd 197 27 copnjugated copnjugate VBN cord-048471-7jszm1nd 197 28 secondary secondary JJ cord-048471-7jszm1nd 197 29 antibody antibody NN cord-048471-7jszm1nd 197 30 ( ( -LRB- cord-048471-7jszm1nd 197 31 Santa Santa NNP cord-048471-7jszm1nd 197 32 Cruz Cruz NNP cord-048471-7jszm1nd 197 33 ) ) -RRB- cord-048471-7jszm1nd 197 34 at at IN cord-048471-7jszm1nd 197 35 the the DT cord-048471-7jszm1nd 197 36 recommended recommend VBN cord-048471-7jszm1nd 197 37 diltution diltution NN cord-048471-7jszm1nd 197 38 . . . cord-048471-7jszm1nd 198 1 The the DT cord-048471-7jszm1nd 198 2 ECL ECL NNP cord-048471-7jszm1nd 198 3 Western western JJ cord-048471-7jszm1nd 198 4 blotting blotting NN cord-048471-7jszm1nd 198 5 reagents reagent NNS cord-048471-7jszm1nd 198 6 kit kit NN cord-048471-7jszm1nd 198 7 ( ( -LRB- cord-048471-7jszm1nd 198 8 G.E. G.E. NNP cord-048471-7jszm1nd 198 9 Healthcare Healthcare NNP cord-048471-7jszm1nd 198 10 ) ) -RRB- cord-048471-7jszm1nd 198 11 was be VBD cord-048471-7jszm1nd 198 12 used use VBN cord-048471-7jszm1nd 198 13 to to TO cord-048471-7jszm1nd 198 14 detect detect VB cord-048471-7jszm1nd 198 15 antibody antibody NN cord-048471-7jszm1nd 198 16 bound bind VBN cord-048471-7jszm1nd 198 17 protein protein NN cord-048471-7jszm1nd 198 18 , , , cord-048471-7jszm1nd 198 19 which which WDT cord-048471-7jszm1nd 198 20 was be VBD cord-048471-7jszm1nd 198 21 visualised visualise VBN cord-048471-7jszm1nd 198 22 by by IN cord-048471-7jszm1nd 198 23 exposure exposure NN cord-048471-7jszm1nd 198 24 to to IN cord-048471-7jszm1nd 198 25 BioMax BioMax NNP cord-048471-7jszm1nd 198 26 Light Light NNP cord-048471-7jszm1nd 198 27 film film NN cord-048471-7jszm1nd 198 28 ( ( -LRB- cord-048471-7jszm1nd 198 29 Kodak Kodak NNP cord-048471-7jszm1nd 198 30 ) ) -RRB- cord-048471-7jszm1nd 198 31 . . . cord-048471-7jszm1nd 199 1 CRFK CRFK NNP cord-048471-7jszm1nd 199 2 cells cell NNS cord-048471-7jszm1nd 199 3 were be VBD cord-048471-7jszm1nd 199 4 seeded seed VBN cord-048471-7jszm1nd 199 5 into into IN cord-048471-7jszm1nd 199 6 6 6 CD cord-048471-7jszm1nd 199 7 well well NN cord-048471-7jszm1nd 199 8 trays tray NNS cord-048471-7jszm1nd 199 9 and and CC cord-048471-7jszm1nd 199 10 transfected transfecte VBN cord-048471-7jszm1nd 199 11 with with IN cord-048471-7jszm1nd 199 12 capped cap VBN cord-048471-7jszm1nd 199 13 JV JV NNP cord-048471-7jszm1nd 199 14 V5 V5 NNP cord-048471-7jszm1nd 199 15 RNA RNA NNP cord-048471-7jszm1nd 199 16 as as IN cord-048471-7jszm1nd 199 17 described describe VBN cord-048471-7jszm1nd 199 18 . . . cord-048471-7jszm1nd 200 1 Following follow VBG cord-048471-7jszm1nd 200 2 a a DT cord-048471-7jszm1nd 200 3 24 24 CD cord-048471-7jszm1nd 200 4 hr hr NN cord-048471-7jszm1nd 200 5 incubation incubation NN cord-048471-7jszm1nd 200 6 cycloheximide cycloheximide NN cord-048471-7jszm1nd 200 7 ( ( -LRB- cord-048471-7jszm1nd 200 8 Sigma Sigma NNP cord-048471-7jszm1nd 200 9 ) ) -RRB- cord-048471-7jszm1nd 200 10 was be VBD cord-048471-7jszm1nd 200 11 added add VBN cord-048471-7jszm1nd 200 12 to to IN cord-048471-7jszm1nd 200 13 the the DT cord-048471-7jszm1nd 200 14 cells cell NNS cord-048471-7jszm1nd 200 15 at at IN cord-048471-7jszm1nd 200 16 a a DT cord-048471-7jszm1nd 200 17 final final JJ cord-048471-7jszm1nd 200 18 concentration concentration NN cord-048471-7jszm1nd 200 19 of of IN cord-048471-7jszm1nd 200 20 50 50 CD cord-048471-7jszm1nd 200 21 mg mg NNP cord-048471-7jszm1nd 200 22 / / SYM cord-048471-7jszm1nd 200 23 ml ml NN cord-048471-7jszm1nd 200 24 . . . cord-048471-7jszm1nd 201 1 Cells cell NNS cord-048471-7jszm1nd 201 2 were be VBD cord-048471-7jszm1nd 201 3 harvested harvest VBN cord-048471-7jszm1nd 201 4 at at IN cord-048471-7jszm1nd 201 5 indicated indicate VBN cord-048471-7jszm1nd 201 6 times time NNS cord-048471-7jszm1nd 201 7 for for IN cord-048471-7jszm1nd 201 8 the the DT cord-048471-7jszm1nd 201 9 preparation preparation NN cord-048471-7jszm1nd 201 10 of of IN cord-048471-7jszm1nd 201 11 lysates lysate NNS cord-048471-7jszm1nd 201 12 for for IN cord-048471-7jszm1nd 201 13 V5 v5 JJ cord-048471-7jszm1nd 201 14 Western western JJ cord-048471-7jszm1nd 201 15 analysis analysis NN cord-048471-7jszm1nd 201 16 as as IN cord-048471-7jszm1nd 201 17 described describe VBN cord-048471-7jszm1nd 201 18 above above RB cord-048471-7jszm1nd 201 19 . . . cord-048471-7jszm1nd 202 1 Bradford Bradford NNP cord-048471-7jszm1nd 202 2 reagent reagent NN cord-048471-7jszm1nd 202 3 ( ( -LRB- cord-048471-7jszm1nd 202 4 Sigma Sigma NNP cord-048471-7jszm1nd 202 5 ) ) -RRB- cord-048471-7jszm1nd 202 6 was be VBD cord-048471-7jszm1nd 202 7 used use VBN cord-048471-7jszm1nd 202 8 to to TO cord-048471-7jszm1nd 202 9 ensure ensure VB cord-048471-7jszm1nd 202 10 equal equal JJ cord-048471-7jszm1nd 202 11 loading loading NN cord-048471-7jszm1nd 202 12 of of IN cord-048471-7jszm1nd 202 13 lysates lysate NNS cord-048471-7jszm1nd 202 14 according accord VBG cord-048471-7jszm1nd 202 15 to to IN cord-048471-7jszm1nd 202 16 the the DT cord-048471-7jszm1nd 202 17 manufacturer manufacturer NN cord-048471-7jszm1nd 202 18 's 's POS cord-048471-7jszm1nd 202 19 recommendations recommendation NNS cord-048471-7jszm1nd 202 20 . . . cord-048471-7jszm1nd 203 1 Studies study NNS cord-048471-7jszm1nd 203 2 into into IN cord-048471-7jszm1nd 203 3 diarrhoea diarrhoea NN cord-048471-7jszm1nd 203 4 of of IN cord-048471-7jszm1nd 203 5 young young JJ cord-048471-7jszm1nd 203 6 calves calf NNS cord-048471-7jszm1nd 203 7 . . . cord-048471-7jszm1nd 204 1 Sixth sixth JJ cord-048471-7jszm1nd 204 2 communication communication NN cord-048471-7jszm1nd 204 3 : : : cord-048471-7jszm1nd 204 4 Detection detection NN cord-048471-7jszm1nd 204 5 and and CC cord-048471-7jszm1nd 204 6 determination determination NN cord-048471-7jszm1nd 204 7 of of IN cord-048471-7jszm1nd 204 8 pathogenicity pathogenicity NN cord-048471-7jszm1nd 204 9 of of IN cord-048471-7jszm1nd 204 10 a a DT cord-048471-7jszm1nd 204 11 bovine bovine JJ cord-048471-7jszm1nd 204 12 Corona Corona NNP cord-048471-7jszm1nd 204 13 virus virus NN cord-048471-7jszm1nd 204 14 and and CC cord-048471-7jszm1nd 204 15 an an DT cord-048471-7jszm1nd 204 16 undefined undefined JJ cord-048471-7jszm1nd 204 17 icosahedric icosahedric JJ cord-048471-7jszm1nd 204 18 virus virus NN cord-048471-7jszm1nd 204 19 . . . cord-048471-7jszm1nd 205 1 Archives archive NNS cord-048471-7jszm1nd 205 2 of of IN cord-048471-7jszm1nd 205 3 experimental experimental JJ cord-048471-7jszm1nd 205 4 Veterinary veterinary JJ cord-048471-7jszm1nd 205 5 medicine medicine NN cord-048471-7jszm1nd 205 6 Studies Studies NNPS cord-048471-7jszm1nd 205 7 into into IN cord-048471-7jszm1nd 205 8 diarrhoea diarrhoea NN cord-048471-7jszm1nd 205 9 of of IN cord-048471-7jszm1nd 205 10 young young JJ cord-048471-7jszm1nd 205 11 calves calf NNS cord-048471-7jszm1nd 205 12 - - : cord-048471-7jszm1nd 205 13 Seventh Seventh NNP cord-048471-7jszm1nd 205 14 Communication Communication NNP cord-048471-7jszm1nd 205 15 : : : cord-048471-7jszm1nd 205 16 ' ' '' cord-048471-7jszm1nd 205 17 ' ' `` cord-048471-7jszm1nd 205 18 Zackenvirus Zackenvirus NNP cord-048471-7jszm1nd 205 19 ' ' '' cord-048471-7jszm1nd 205 20 ' ' '' cord-048471-7jszm1nd 206 1 ( ( -LRB- cord-048471-7jszm1nd 206 2 Jena Jena NNP cord-048471-7jszm1nd 206 3 - - HYPH cord-048471-7jszm1nd 206 4 Agens Agens NNP cord-048471-7jszm1nd 206 5 117/80)-A 117/80)-a CD cord-048471-7jszm1nd 206 6 new new JJ cord-048471-7jszm1nd 206 7 diarrhoea diarrhoea NN cord-048471-7jszm1nd 206 8 pathogen pathogen NN cord-048471-7jszm1nd 206 9 to to IN cord-048471-7jszm1nd 206 10 calf calf NN cord-048471-7jszm1nd 206 11 . . . cord-048471-7jszm1nd 207 1 Archives archive NNS cord-048471-7jszm1nd 207 2 of of IN cord-048471-7jszm1nd 207 3 experimental experimental JJ cord-048471-7jszm1nd 207 4 Veterinary veterinary JJ cord-048471-7jszm1nd 207 5 medicine medicine NN cord-048471-7jszm1nd 207 6 Complete complete VB cord-048471-7jszm1nd 207 7 genomic genomic JJ cord-048471-7jszm1nd 207 8 characterization characterization NN cord-048471-7jszm1nd 207 9 and and CC cord-048471-7jszm1nd 207 10 antigenic antigenic JJ cord-048471-7jszm1nd 207 11 relatedness relatedness NN cord-048471-7jszm1nd 207 12 of of IN cord-048471-7jszm1nd 207 13 genogroup genogroup NNP cord-048471-7jszm1nd 207 14 III III NNP cord-048471-7jszm1nd 207 15 , , , cord-048471-7jszm1nd 207 16 genotype genotype NN cord-048471-7jszm1nd 207 17 2 2 CD cord-048471-7jszm1nd 207 18 bovine bovine JJ cord-048471-7jszm1nd 207 19 noroviruses noroviruse NNS cord-048471-7jszm1nd 208 1 Genotype genotype NN cord-048471-7jszm1nd 208 2 1 1 CD cord-048471-7jszm1nd 208 3 and and CC cord-048471-7jszm1nd 208 4 Genotype Genotype NNP cord-048471-7jszm1nd 208 5 2 2 CD cord-048471-7jszm1nd 208 6 Bovine Bovine NNP cord-048471-7jszm1nd 208 7 Noroviruses Noroviruses NNPS cord-048471-7jszm1nd 208 8 Are be VBP cord-048471-7jszm1nd 208 9 Antigenically Antigenically NNP cord-048471-7jszm1nd 208 10 Distinct distinct JJ cord-048471-7jszm1nd 208 11 but but CC cord-048471-7jszm1nd 208 12 Share share VBP cord-048471-7jszm1nd 208 13 a a DT cord-048471-7jszm1nd 208 14 Cross Cross NNP cord-048471-7jszm1nd 208 15 - - HYPH cord-048471-7jszm1nd 208 16 Reactive reactive JJ cord-048471-7jszm1nd 208 17 Epitope Epitope NNP cord-048471-7jszm1nd 208 18 with with IN cord-048471-7jszm1nd 208 19 Human Human NNP cord-048471-7jszm1nd 208 20 Noroviruses Noroviruses NNP cord-048471-7jszm1nd 208 21 Characterization Characterization NNP cord-048471-7jszm1nd 208 22 of of IN cord-048471-7jszm1nd 208 23 a a DT cord-048471-7jszm1nd 208 24 calici calici VBN cord-048471-7jszm1nd 208 25 - - HYPH cord-048471-7jszm1nd 208 26 like like JJ cord-048471-7jszm1nd 208 27 virus virus NN cord-048471-7jszm1nd 208 28 ( ( -LRB- cord-048471-7jszm1nd 208 29 Newbury Newbury NNP cord-048471-7jszm1nd 208 30 agent agent NN cord-048471-7jszm1nd 208 31 ) ) -RRB- cord-048471-7jszm1nd 208 32 found find VBD cord-048471-7jszm1nd 208 33 in in IN cord-048471-7jszm1nd 208 34 association association NN cord-048471-7jszm1nd 208 35 with with IN cord-048471-7jszm1nd 208 36 astrovirus astrovirus NNP cord-048471-7jszm1nd 208 37 in in IN cord-048471-7jszm1nd 208 38 bovine bovine JJ cord-048471-7jszm1nd 208 39 diarrhea diarrhea NN cord-048471-7jszm1nd 209 1 The the DT cord-048471-7jszm1nd 209 2 Seroepidemiology Seroepidemiology NNP cord-048471-7jszm1nd 209 3 of of IN cord-048471-7jszm1nd 209 4 genogroup genogroup NN cord-048471-7jszm1nd 209 5 1 1 CD cord-048471-7jszm1nd 209 6 and and CC cord-048471-7jszm1nd 209 7 genogroup genogroup NNP cord-048471-7jszm1nd 209 8 2 2 CD cord-048471-7jszm1nd 209 9 Norwalk Norwalk NNP cord-048471-7jszm1nd 209 10 - - HYPH cord-048471-7jszm1nd 209 11 like like JJ cord-048471-7jszm1nd 209 12 viruses virus NNS cord-048471-7jszm1nd 209 13 in in IN cord-048471-7jszm1nd 209 14 Italy Italy NNP cord-048471-7jszm1nd 209 15 Molecular Molecular NNP cord-048471-7jszm1nd 209 16 characterization characterization NN cord-048471-7jszm1nd 209 17 of of IN cord-048471-7jszm1nd 209 18 a a DT cord-048471-7jszm1nd 209 19 bovine bovine JJ cord-048471-7jszm1nd 209 20 enteric enteric JJ cord-048471-7jszm1nd 209 21 calicivirus calicivirus NN cord-048471-7jszm1nd 209 22 : : : cord-048471-7jszm1nd 209 23 relationship relationship NN cord-048471-7jszm1nd 209 24 to to IN cord-048471-7jszm1nd 209 25 the the DT cord-048471-7jszm1nd 209 26 Norwalk Norwalk NNP cord-048471-7jszm1nd 209 27 - - HYPH cord-048471-7jszm1nd 209 28 like like JJ cord-048471-7jszm1nd 209 29 viruses virus NNS cord-048471-7jszm1nd 209 30 Two two CD cord-048471-7jszm1nd 209 31 nonoverlapping nonoverlappe VBG cord-048471-7jszm1nd 209 32 domains domain NNS cord-048471-7jszm1nd 209 33 on on IN cord-048471-7jszm1nd 209 34 the the DT cord-048471-7jszm1nd 209 35 Norwalk Norwalk NNP cord-048471-7jszm1nd 209 36 virus virus NN cord-048471-7jszm1nd 209 37 open open JJ cord-048471-7jszm1nd 209 38 reading reading NN cord-048471-7jszm1nd 209 39 frame frame NN cord-048471-7jszm1nd 209 40 3 3 CD cord-048471-7jszm1nd 210 1 ( ( -LRB- cord-048471-7jszm1nd 210 2 ORF3 ORF3 NNP cord-048471-7jszm1nd 210 3 ) ) -RRB- cord-048471-7jszm1nd 210 4 protein protein NN cord-048471-7jszm1nd 210 5 are be VBP cord-048471-7jszm1nd 210 6 involved involve VBN cord-048471-7jszm1nd 210 7 in in IN cord-048471-7jszm1nd 210 8 the the DT cord-048471-7jszm1nd 210 9 formation formation NN cord-048471-7jszm1nd 210 10 of of IN cord-048471-7jszm1nd 210 11 the the DT cord-048471-7jszm1nd 210 12 phosphorylated phosphorylated JJ cord-048471-7jszm1nd 210 13 35 35 CD cord-048471-7jszm1nd 210 14 K K NNP cord-048471-7jszm1nd 210 15 protein protein NN cord-048471-7jszm1nd 210 16 and and CC cord-048471-7jszm1nd 210 17 in in IN cord-048471-7jszm1nd 210 18 ORF3-capsid orf3-capsid JJ cord-048471-7jszm1nd 210 19 protein protein NN cord-048471-7jszm1nd 210 20 interactions interaction NNS cord-048471-7jszm1nd 210 21 Processing process VBG cord-048471-7jszm1nd 210 22 map map NN cord-048471-7jszm1nd 210 23 and and CC cord-048471-7jszm1nd 210 24 essential essential JJ cord-048471-7jszm1nd 210 25 cleavage cleavage NN cord-048471-7jszm1nd 210 26 sites site NNS cord-048471-7jszm1nd 210 27 of of IN cord-048471-7jszm1nd 210 28 the the DT cord-048471-7jszm1nd 210 29 nonstructural nonstructural JJ cord-048471-7jszm1nd 210 30 polyprotein polyprotein NN cord-048471-7jszm1nd 210 31 encoded encode VBN cord-048471-7jszm1nd 210 32 by by IN cord-048471-7jszm1nd 210 33 ORF1 ORF1 NNP cord-048471-7jszm1nd 210 34 of of IN cord-048471-7jszm1nd 210 35 the the DT cord-048471-7jszm1nd 210 36 feline feline JJ cord-048471-7jszm1nd 210 37 calicivirus calicivirus NNP cord-048471-7jszm1nd 210 38 genome genome NN cord-048471-7jszm1nd 210 39 Rabbit Rabbit NNP cord-048471-7jszm1nd 210 40 Hemorrhagic Hemorrhagic NNP cord-048471-7jszm1nd 210 41 Disease Disease NNP cord-048471-7jszm1nd 210 42 Virus virus NN cord-048471-7jszm1nd 210 43 : : : cord-048471-7jszm1nd 210 44 Genome Genome NNP cord-048471-7jszm1nd 210 45 Organisation Organisation NNP cord-048471-7jszm1nd 210 46 and and CC cord-048471-7jszm1nd 210 47 Polyprotein Polyprotein NNP cord-048471-7jszm1nd 210 48 Processing Processing NNP cord-048471-7jszm1nd 210 49 of of IN cord-048471-7jszm1nd 210 50 a a DT cord-048471-7jszm1nd 210 51 Calicivirus Calicivirus NNP cord-048471-7jszm1nd 210 52 Studied study VBN cord-048471-7jszm1nd 210 53 after after IN cord-048471-7jszm1nd 210 54 Transient transient JJ cord-048471-7jszm1nd 210 55 Expression expression NN cord-048471-7jszm1nd 210 56 of of IN cord-048471-7jszm1nd 210 57 cDNA cdna NN cord-048471-7jszm1nd 210 58 Constructs Constructs NNPS cord-048471-7jszm1nd 210 59 Organisation Organisation NNP cord-048471-7jszm1nd 210 60 and and CC cord-048471-7jszm1nd 210 61 Expression Expression NNP cord-048471-7jszm1nd 210 62 of of IN cord-048471-7jszm1nd 210 63 Calicivirus Calicivirus NNP cord-048471-7jszm1nd 210 64 Genes Genes NNPS cord-048471-7jszm1nd 210 65 Cleavage Cleavage NNP cord-048471-7jszm1nd 210 66 map map NN cord-048471-7jszm1nd 210 67 and and CC cord-048471-7jszm1nd 210 68 proteolytic proteolytic JJ cord-048471-7jszm1nd 210 69 processing processing NN cord-048471-7jszm1nd 210 70 of of IN cord-048471-7jszm1nd 210 71 the the DT cord-048471-7jszm1nd 210 72 murine murine JJ cord-048471-7jszm1nd 210 73 norovirus norovirus NN cord-048471-7jszm1nd 210 74 nonstructural nonstructural JJ cord-048471-7jszm1nd 210 75 polyprotein polyprotein NN cord-048471-7jszm1nd 210 76 in in IN cord-048471-7jszm1nd 210 77 infected infected JJ cord-048471-7jszm1nd 210 78 cells cell NNS cord-048471-7jszm1nd 210 79 Norovirus norovirus IN cord-048471-7jszm1nd 210 80 protein protein NN cord-048471-7jszm1nd 210 81 structure structure NN cord-048471-7jszm1nd 210 82 and and CC cord-048471-7jszm1nd 210 83 function function VB cord-048471-7jszm1nd 210 84 Open open JJ cord-048471-7jszm1nd 210 85 reading reading NN cord-048471-7jszm1nd 210 86 frame frame NN cord-048471-7jszm1nd 210 87 1 1 CD cord-048471-7jszm1nd 210 88 of of IN cord-048471-7jszm1nd 210 89 the the DT cord-048471-7jszm1nd 210 90 Norwalklike Norwalklike NNP cord-048471-7jszm1nd 210 91 virus virus NN cord-048471-7jszm1nd 210 92 Camberwell Camberwell NNP cord-048471-7jszm1nd 210 93 : : : cord-048471-7jszm1nd 210 94 Completion completion NN cord-048471-7jszm1nd 210 95 of of IN cord-048471-7jszm1nd 210 96 sequence sequence NN cord-048471-7jszm1nd 210 97 and and CC cord-048471-7jszm1nd 210 98 expression expression NN cord-048471-7jszm1nd 210 99 in in IN cord-048471-7jszm1nd 210 100 mammalian mammalian JJ cord-048471-7jszm1nd 210 101 cells cell NNS cord-048471-7jszm1nd 211 1 Norwalk Norwalk NNP cord-048471-7jszm1nd 211 2 virus virus NN cord-048471-7jszm1nd 211 3 N n CD cord-048471-7jszm1nd 211 4 - - HYPH cord-048471-7jszm1nd 211 5 terminal terminal JJ cord-048471-7jszm1nd 211 6 nonstructural nonstructural JJ cord-048471-7jszm1nd 211 7 protein protein NN cord-048471-7jszm1nd 211 8 is be VBZ cord-048471-7jszm1nd 211 9 associated associate VBN cord-048471-7jszm1nd 211 10 with with IN cord-048471-7jszm1nd 211 11 disassembly disassembly NN cord-048471-7jszm1nd 211 12 of of IN cord-048471-7jszm1nd 211 13 the the DT cord-048471-7jszm1nd 211 14 Golgi Golgi NNP cord-048471-7jszm1nd 211 15 complex complex NN cord-048471-7jszm1nd 211 16 in in IN cord-048471-7jszm1nd 211 17 transfected transfecte VBN cord-048471-7jszm1nd 211 18 cells cell NNS cord-048471-7jszm1nd 211 19 Norwalk Norwalk NNP cord-048471-7jszm1nd 211 20 virus virus NN cord-048471-7jszm1nd 211 21 nonstructural nonstructural JJ cord-048471-7jszm1nd 211 22 protein protein NNP cord-048471-7jszm1nd 211 23 p48 p48 NNP cord-048471-7jszm1nd 211 24 forms form VBZ cord-048471-7jszm1nd 211 25 a a DT cord-048471-7jszm1nd 211 26 complex complex NN cord-048471-7jszm1nd 211 27 with with IN cord-048471-7jszm1nd 211 28 the the DT cord-048471-7jszm1nd 211 29 SNARE snare NN cord-048471-7jszm1nd 211 30 regulator regulator NN cord-048471-7jszm1nd 211 31 VAP VAP NNP cord-048471-7jszm1nd 211 32 - - HYPH cord-048471-7jszm1nd 211 33 A A NNP cord-048471-7jszm1nd 211 34 and and CC cord-048471-7jszm1nd 211 35 prevents prevent VBZ cord-048471-7jszm1nd 211 36 cell cell NN cord-048471-7jszm1nd 211 37 surface surface NN cord-048471-7jszm1nd 211 38 expression expression NN cord-048471-7jszm1nd 211 39 of of IN cord-048471-7jszm1nd 211 40 vesicular vesicular JJ cord-048471-7jszm1nd 211 41 stomatitis stomatitis NN cord-048471-7jszm1nd 211 42 virus virus NN cord-048471-7jszm1nd 211 43 G g NN cord-048471-7jszm1nd 211 44 protein protein NN cord-048471-7jszm1nd 211 45 Activity activity NN cord-048471-7jszm1nd 211 46 of of IN cord-048471-7jszm1nd 211 47 the the DT cord-048471-7jszm1nd 211 48 Norovirus Norovirus NNP cord-048471-7jszm1nd 211 49 Camberwell Camberwell NNP cord-048471-7jszm1nd 211 50 Proteinase Proteinase NNP cord-048471-7jszm1nd 211 51 and and CC cord-048471-7jszm1nd 211 52 Cleavage Cleavage NNP cord-048471-7jszm1nd 211 53 of of IN cord-048471-7jszm1nd 211 54 the the DT cord-048471-7jszm1nd 211 55 N N NNP cord-048471-7jszm1nd 211 56 - - HYPH cord-048471-7jszm1nd 211 57 Terminal Terminal NNP cord-048471-7jszm1nd 211 58 Protein Protein NNP cord-048471-7jszm1nd 211 59 Encoded encode VBN cord-048471-7jszm1nd 211 60 by by IN cord-048471-7jszm1nd 211 61 ORF1 ORF1 NNP cord-048471-7jszm1nd 211 62 Sequence Sequence NNP cord-048471-7jszm1nd 211 63 and and CC cord-048471-7jszm1nd 211 64 genomic genomic JJ cord-048471-7jszm1nd 211 65 organization organization NN cord-048471-7jszm1nd 211 66 of of IN cord-048471-7jszm1nd 211 67 Norwalk Norwalk NNP cord-048471-7jszm1nd 211 68 virus virus NN cord-048471-7jszm1nd 211 69 La La NNP cord-048471-7jszm1nd 211 70 , , , cord-048471-7jszm1nd 211 71 PTB PTB NNP cord-048471-7jszm1nd 211 72 , , , cord-048471-7jszm1nd 211 73 and and CC cord-048471-7jszm1nd 211 74 PAB PAB NNP cord-048471-7jszm1nd 211 75 proteins protein NNS cord-048471-7jszm1nd 211 76 bind bind VBP cord-048471-7jszm1nd 211 77 to to IN cord-048471-7jszm1nd 211 78 the the DT cord-048471-7jszm1nd 211 79 39 39 CD cord-048471-7jszm1nd 211 80 untranslated untranslated JJ cord-048471-7jszm1nd 211 81 region region NN cord-048471-7jszm1nd 211 82 of of IN cord-048471-7jszm1nd 211 83 Norwalk Norwalk NNP cord-048471-7jszm1nd 211 84 virus virus NN cord-048471-7jszm1nd 211 85 genomic genomic JJ cord-048471-7jszm1nd 211 86 RNA RNA NNP cord-048471-7jszm1nd 211 87 Requirement Requirement NNP cord-048471-7jszm1nd 211 88 of of IN cord-048471-7jszm1nd 211 89 Poly(rC Poly(rC NNP cord-048471-7jszm1nd 211 90 ) ) -RRB- cord-048471-7jszm1nd 212 1 binding bind VBG cord-048471-7jszm1nd 212 2 protein protein NN cord-048471-7jszm1nd 212 3 2 2 CD cord-048471-7jszm1nd 212 4 for for IN cord-048471-7jszm1nd 212 5 translation translation NN cord-048471-7jszm1nd 212 6 of of IN cord-048471-7jszm1nd 212 7 poliovirus poliovirus NN cord-048471-7jszm1nd 212 8 RNA RNA NNP cord-048471-7jszm1nd 212 9 Stem Stem NNP cord-048471-7jszm1nd 212 10 - - HYPH cord-048471-7jszm1nd 212 11 Loop Loop NNP cord-048471-7jszm1nd 212 12 Structure Structure NNP cord-048471-7jszm1nd 212 13 Synergy Synergy NNP cord-048471-7jszm1nd 212 14 in in IN cord-048471-7jszm1nd 212 15 Binding bind VBG cord-048471-7jszm1nd 212 16 Cellular Cellular NNP cord-048471-7jszm1nd 212 17 Proteins Proteins NNPS cord-048471-7jszm1nd 212 18 to to IN cord-048471-7jszm1nd 212 19 the the DT cord-048471-7jszm1nd 212 20 59 59 CD cord-048471-7jszm1nd 212 21 Noncoding Noncoding NNP cord-048471-7jszm1nd 212 22 Region Region NNP cord-048471-7jszm1nd 212 23 of of IN cord-048471-7jszm1nd 212 24 Poliovirus Poliovirus NNP cord-048471-7jszm1nd 212 25 Rna Rna NNP cord-048471-7jszm1nd 212 26 Direct direct JJ cord-048471-7jszm1nd 212 27 evidence evidence NN cord-048471-7jszm1nd 212 28 that that IN cord-048471-7jszm1nd 212 29 polypyrimidine polypyrimidine NNP cord-048471-7jszm1nd 212 30 tract tract NN cord-048471-7jszm1nd 212 31 binding bind VBG cord-048471-7jszm1nd 212 32 protein protein NN cord-048471-7jszm1nd 212 33 ( ( -LRB- cord-048471-7jszm1nd 212 34 PTB PTB NNP cord-048471-7jszm1nd 212 35 ) ) -RRB- cord-048471-7jszm1nd 212 36 is be VBZ cord-048471-7jszm1nd 212 37 essential essential JJ cord-048471-7jszm1nd 212 38 for for IN cord-048471-7jszm1nd 212 39 internal internal JJ cord-048471-7jszm1nd 212 40 initiation initiation NN cord-048471-7jszm1nd 212 41 of of IN cord-048471-7jszm1nd 212 42 translation translation NN cord-048471-7jszm1nd 212 43 of of IN cord-048471-7jszm1nd 212 44 encephalomyocarditis encephalomyocarditis NNP cord-048471-7jszm1nd 212 45 virus virus NN cord-048471-7jszm1nd 212 46 RNA RNA NNP cord-048471-7jszm1nd 212 47 Sonenberg Sonenberg NNP cord-048471-7jszm1nd 212 48 N N NNP cord-048471-7jszm1nd 212 49 ( ( -LRB- cord-048471-7jszm1nd 212 50 1993 1993 CD cord-048471-7jszm1nd 212 51 ) ) -RRB- cord-048471-7jszm1nd 213 1 La La NNP cord-048471-7jszm1nd 213 2 autoantigen autoantigen NNP cord-048471-7jszm1nd 213 3 enhances enhance VBZ cord-048471-7jszm1nd 213 4 and and CC cord-048471-7jszm1nd 213 5 corrects correct VBZ cord-048471-7jszm1nd 213 6 aberrant aberrant JJ cord-048471-7jszm1nd 213 7 translation translation NN cord-048471-7jszm1nd 213 8 of of IN cord-048471-7jszm1nd 213 9 poliovirus poliovirus NN cord-048471-7jszm1nd 213 10 RNA RNA NNP cord-048471-7jszm1nd 213 11 in in IN cord-048471-7jszm1nd 213 12 reticulocyte reticulocyte NN cord-048471-7jszm1nd 213 13 lysate lysate NN cord-048471-7jszm1nd 213 14 Interaction Interaction NNP cord-048471-7jszm1nd 213 15 of of IN cord-048471-7jszm1nd 213 16 cellular cellular JJ cord-048471-7jszm1nd 213 17 proteins protein NNS cord-048471-7jszm1nd 213 18 with with IN cord-048471-7jszm1nd 213 19 the the DT cord-048471-7jszm1nd 213 20 59 59 CD cord-048471-7jszm1nd 213 21 end end NN cord-048471-7jszm1nd 213 22 of of IN cord-048471-7jszm1nd 213 23 Norwalk Norwalk NNP cord-048471-7jszm1nd 213 24 virus virus NN cord-048471-7jszm1nd 213 25 genomic genomic JJ cord-048471-7jszm1nd 213 26 RNA RNA NNP cord-048471-7jszm1nd 214 1 The the DT cord-048471-7jszm1nd 214 2 genomelinked genomelinked JJ cord-048471-7jszm1nd 214 3 protein protein NN cord-048471-7jszm1nd 214 4 VPg VPg NNS cord-048471-7jszm1nd 214 5 of of IN cord-048471-7jszm1nd 214 6 the the DT cord-048471-7jszm1nd 214 7 Norwalk Norwalk NNP cord-048471-7jszm1nd 214 8 virus virus NN cord-048471-7jszm1nd 214 9 binds bind VBZ cord-048471-7jszm1nd 214 10 eIF3 eIF3 NNP cord-048471-7jszm1nd 214 11 , , , cord-048471-7jszm1nd 214 12 suggesting suggest VBG cord-048471-7jszm1nd 214 13 its -PRON- PRP$ cord-048471-7jszm1nd 214 14 role role NN cord-048471-7jszm1nd 214 15 in in IN cord-048471-7jszm1nd 214 16 translation translation NN cord-048471-7jszm1nd 214 17 initiation initiation NN cord-048471-7jszm1nd 214 18 complex complex JJ cord-048471-7jszm1nd 214 19 recruitment recruitment NN cord-048471-7jszm1nd 214 20 VPg VPg NNS cord-048471-7jszm1nd 214 21 of of IN cord-048471-7jszm1nd 214 22 murine murine JJ cord-048471-7jszm1nd 214 23 norovirus norovirus NN cord-048471-7jszm1nd 214 24 binds bind VBZ cord-048471-7jszm1nd 214 25 translation translation NN cord-048471-7jszm1nd 214 26 initiation initiation NN cord-048471-7jszm1nd 214 27 factors factor NNS cord-048471-7jszm1nd 214 28 in in IN cord-048471-7jszm1nd 214 29 infected infected JJ cord-048471-7jszm1nd 214 30 cells cell NNS cord-048471-7jszm1nd 214 31 New new JJ cord-048471-7jszm1nd 214 32 Ways way NNS cord-048471-7jszm1nd 214 33 of of IN cord-048471-7jszm1nd 214 34 Initiating initiate VBG cord-048471-7jszm1nd 214 35 Translation translation NN cord-048471-7jszm1nd 214 36 in in IN cord-048471-7jszm1nd 214 37 Eukaryotes eukaryote NNS cord-048471-7jszm1nd 214 38 ? ? . cord-048471-7jszm1nd 215 1 Polyprotein polyprotein NN cord-048471-7jszm1nd 215 2 processing processing NN cord-048471-7jszm1nd 215 3 in in IN cord-048471-7jszm1nd 215 4 Southampton Southampton NNP cord-048471-7jszm1nd 215 5 virus virus NN cord-048471-7jszm1nd 215 6 : : : cord-048471-7jszm1nd 215 7 cleavage cleavage NN cord-048471-7jszm1nd 215 8 in in IN cord-048471-7jszm1nd 215 9 trans trans NNP cord-048471-7jszm1nd 215 10 by by IN cord-048471-7jszm1nd 215 11 the the DT cord-048471-7jszm1nd 215 12 3C 3c NN cord-048471-7jszm1nd 215 13 - - HYPH cord-048471-7jszm1nd 215 14 like like JJ cord-048471-7jszm1nd 215 15 protease protease NN cord-048471-7jszm1nd 215 16 Identification identification NN cord-048471-7jszm1nd 215 17 of of IN cord-048471-7jszm1nd 215 18 An an DT cord-048471-7jszm1nd 215 19 Epitope Epitope NNP cord-048471-7jszm1nd 215 20 on on IN cord-048471-7jszm1nd 215 21 the the DT cord-048471-7jszm1nd 215 22 P p NN cord-048471-7jszm1nd 215 23 - - HYPH cord-048471-7jszm1nd 215 24 Proteins protein NNS cord-048471-7jszm1nd 215 25 and and CC cord-048471-7jszm1nd 215 26 V v NN cord-048471-7jszm1nd 215 27 - - HYPH cord-048471-7jszm1nd 215 28 Proteins protein NNS cord-048471-7jszm1nd 215 29 of of IN cord-048471-7jszm1nd 215 30 Simian Simian NNP cord-048471-7jszm1nd 215 31 - - HYPH cord-048471-7jszm1nd 215 32 Virus virus NN cord-048471-7jszm1nd 215 33 5 5 CD cord-048471-7jszm1nd 215 34 That that WDT cord-048471-7jszm1nd 215 35 Distinguishes distinguish VBZ cord-048471-7jszm1nd 215 36 Between between IN cord-048471-7jszm1nd 215 37 2 2 CD cord-048471-7jszm1nd 215 38 Isolates Isolates NNPS cord-048471-7jszm1nd 215 39 with with IN cord-048471-7jszm1nd 215 40 Different Different NNP cord-048471-7jszm1nd 215 41 Biological Biological NNP cord-048471-7jszm1nd 215 42 Characteristics Characteristics NNPS cord-048471-7jszm1nd 215 43 Electron Electron NNP cord-048471-7jszm1nd 215 44 - - HYPH cord-048471-7jszm1nd 215 45 Microscopic Microscopic NNP cord-048471-7jszm1nd 215 46 Observation Observation NNP cord-048471-7jszm1nd 215 47 of of IN cord-048471-7jszm1nd 215 48 Feline feline JJ cord-048471-7jszm1nd 215 49 Kidney Kidney NNP cord-048471-7jszm1nd 215 50 - - HYPH cord-048471-7jszm1nd 215 51 Cells cell NNS cord-048471-7jszm1nd 215 52 Infected infect VBN cord-048471-7jszm1nd 215 53 with with IN cord-048471-7jszm1nd 215 54 A a DT cord-048471-7jszm1nd 215 55 Feline feline JJ cord-048471-7jszm1nd 215 56 Calicivirus Calicivirus NNP cord-048471-7jszm1nd 215 57 Viral viral JJ cord-048471-7jszm1nd 215 58 gastroenteritis gastroenteritis NN cord-048471-7jszm1nd 215 59 outbreaks outbreak NNS cord-048471-7jszm1nd 215 60 in in IN cord-048471-7jszm1nd 215 61 Europe Europe NNP