id sid tid token lemma pos cord-286451-ujo72w06 1 1 key key NN cord-286451-ujo72w06 1 2 : : : cord-286451-ujo72w06 1 3 cord-286451-ujo72w06 cord-286451-ujo72w06 VBN cord-286451-ujo72w06 1 4 authors author NNS cord-286451-ujo72w06 1 5 : : : cord-286451-ujo72w06 1 6 Bennett Bennett NNP cord-286451-ujo72w06 1 7 , , , cord-286451-ujo72w06 1 8 Susan Susan NNP cord-286451-ujo72w06 1 9 ; ; : cord-286451-ujo72w06 1 10 Carman Carman NNP cord-286451-ujo72w06 1 11 , , , cord-286451-ujo72w06 1 12 William William NNP cord-286451-ujo72w06 1 13 F. F. NNP cord-286451-ujo72w06 1 14 ; ; : cord-286451-ujo72w06 1 15 Gunson Gunson NNP cord-286451-ujo72w06 1 16 , , , cord-286451-ujo72w06 1 17 Rory Rory NNP cord-286451-ujo72w06 1 18 N. N. NNP cord-286451-ujo72w06 2 1 title title NN cord-286451-ujo72w06 2 2 : : : cord-286451-ujo72w06 3 1 The the DT cord-286451-ujo72w06 3 2 development development NN cord-286451-ujo72w06 3 3 of of IN cord-286451-ujo72w06 3 4 a a DT cord-286451-ujo72w06 3 5 multiplex multiplex JJ cord-286451-ujo72w06 3 6 real real JJ cord-286451-ujo72w06 3 7 - - HYPH cord-286451-ujo72w06 3 8 time time NN cord-286451-ujo72w06 3 9 PCR PCR NNP cord-286451-ujo72w06 3 10 for for IN cord-286451-ujo72w06 3 11 the the DT cord-286451-ujo72w06 3 12 detection detection NN cord-286451-ujo72w06 3 13 of of IN cord-286451-ujo72w06 3 14 herpes herpes NNP cord-286451-ujo72w06 3 15 simplex simplex NNP cord-286451-ujo72w06 3 16 virus virus NN cord-286451-ujo72w06 3 17 1 1 CD cord-286451-ujo72w06 3 18 and and CC cord-286451-ujo72w06 3 19 2 2 CD cord-286451-ujo72w06 3 20 , , , cord-286451-ujo72w06 3 21 varizella varizella NNP cord-286451-ujo72w06 3 22 zoster zoster NNP cord-286451-ujo72w06 3 23 virus virus NN cord-286451-ujo72w06 3 24 , , , cord-286451-ujo72w06 3 25 adenovirus adenovirus NN cord-286451-ujo72w06 3 26 and and CC cord-286451-ujo72w06 3 27 Chlamydia Chlamydia NNP cord-286451-ujo72w06 3 28 trachomatis trachomatis NN cord-286451-ujo72w06 3 29 from from IN cord-286451-ujo72w06 3 30 eye eye NN cord-286451-ujo72w06 3 31 swabs swab NNS cord-286451-ujo72w06 3 32 date date NN cord-286451-ujo72w06 3 33 : : : cord-286451-ujo72w06 3 34 2012 2012 CD cord-286451-ujo72w06 3 35 - - SYM cord-286451-ujo72w06 3 36 09 09 CD cord-286451-ujo72w06 3 37 - - SYM cord-286451-ujo72w06 3 38 18 18 CD cord-286451-ujo72w06 3 39 journal journal NN cord-286451-ujo72w06 3 40 : : : cord-286451-ujo72w06 3 41 J J NNP cord-286451-ujo72w06 3 42 Virol Virol NNP cord-286451-ujo72w06 3 43 Methods Methods NNPS cord-286451-ujo72w06 3 44 DOI DOI NNP cord-286451-ujo72w06 3 45 : : : cord-286451-ujo72w06 3 46 10.1016 10.1016 CD cord-286451-ujo72w06 3 47 / / SYM cord-286451-ujo72w06 3 48 j.jviromet.2012.08.020 j.jviromet.2012.08.020 CD cord-286451-ujo72w06 3 49 sha sha NN cord-286451-ujo72w06 3 50 : : : cord-286451-ujo72w06 4 1 42ce4e5eac6e69f5dc036aa8a7998daef1d9b0cf 42ce4e5eac6e69f5dc036aa8a7998daef1d9b0cf LS cord-286451-ujo72w06 4 2 doc_id doc_id CD cord-286451-ujo72w06 4 3 : : : cord-286451-ujo72w06 4 4 286451 286451 CD cord-286451-ujo72w06 4 5 cord_uid cord_uid NNS cord-286451-ujo72w06 4 6 : : : cord-286451-ujo72w06 5 1 ujo72w06 ujo72w06 NNP cord-286451-ujo72w06 6 1 Infectious infectious JJ cord-286451-ujo72w06 6 2 conjunctivitis conjunctivitis NN cord-286451-ujo72w06 6 3 can can MD cord-286451-ujo72w06 6 4 be be VB cord-286451-ujo72w06 6 5 difficult difficult JJ cord-286451-ujo72w06 6 6 to to TO cord-286451-ujo72w06 6 7 distinguish distinguish VB cord-286451-ujo72w06 6 8 clinically clinically RB cord-286451-ujo72w06 6 9 due due JJ cord-286451-ujo72w06 6 10 to to IN cord-286451-ujo72w06 6 11 the the DT cord-286451-ujo72w06 6 12 considerable considerable JJ cord-286451-ujo72w06 6 13 overlap overlap NN cord-286451-ujo72w06 6 14 in in IN cord-286451-ujo72w06 6 15 clinical clinical JJ cord-286451-ujo72w06 6 16 presentation presentation NN cord-286451-ujo72w06 6 17 so so IN cord-286451-ujo72w06 6 18 clinical clinical JJ cord-286451-ujo72w06 6 19 diagnosis diagnosis NN cord-286451-ujo72w06 6 20 of of IN cord-286451-ujo72w06 6 21 conjunctivitis conjunctivitis NN cord-286451-ujo72w06 6 22 is be VBZ cord-286451-ujo72w06 6 23 often often RB cord-286451-ujo72w06 6 24 insufficient insufficient JJ cord-286451-ujo72w06 6 25 . . . cord-286451-ujo72w06 7 1 It -PRON- PRP cord-286451-ujo72w06 7 2 is be VBZ cord-286451-ujo72w06 7 3 therefore therefore RB cord-286451-ujo72w06 7 4 necessary necessary JJ cord-286451-ujo72w06 7 5 to to TO cord-286451-ujo72w06 7 6 have have VB cord-286451-ujo72w06 7 7 a a DT cord-286451-ujo72w06 7 8 rapid rapid JJ cord-286451-ujo72w06 7 9 diagnostic diagnostic JJ cord-286451-ujo72w06 7 10 test test NN cord-286451-ujo72w06 7 11 that that WDT cord-286451-ujo72w06 7 12 differentiates differentiate VBZ cord-286451-ujo72w06 7 13 between between IN cord-286451-ujo72w06 7 14 the the DT cord-286451-ujo72w06 7 15 different different JJ cord-286451-ujo72w06 7 16 causes cause NNS cord-286451-ujo72w06 7 17 of of IN cord-286451-ujo72w06 7 18 infectious infectious JJ cord-286451-ujo72w06 7 19 conjunctivitis conjunctivitis NN cord-286451-ujo72w06 7 20 . . . cord-286451-ujo72w06 8 1 Screening screen VBG cord-286451-ujo72w06 8 2 clinical clinical JJ cord-286451-ujo72w06 8 3 samples sample NNS cord-286451-ujo72w06 8 4 by by IN cord-286451-ujo72w06 8 5 sample sample NN cord-286451-ujo72w06 8 6 type type NN cord-286451-ujo72w06 8 7 / / SYM cord-286451-ujo72w06 8 8 syndrome syndrome NN cord-286451-ujo72w06 8 9 based base VBN cord-286451-ujo72w06 8 10 multiplex multiplex JJ cord-286451-ujo72w06 8 11 real real JJ cord-286451-ujo72w06 8 12 time time NN cord-286451-ujo72w06 8 13 PCR PCR NNP cord-286451-ujo72w06 8 14 would would MD cord-286451-ujo72w06 8 15 allow allow VB cord-286451-ujo72w06 8 16 for for IN cord-286451-ujo72w06 8 17 rapid rapid JJ cord-286451-ujo72w06 8 18 detection detection NN cord-286451-ujo72w06 8 19 of of IN cord-286451-ujo72w06 8 20 a a DT cord-286451-ujo72w06 8 21 variety variety NN cord-286451-ujo72w06 8 22 of of IN cord-286451-ujo72w06 8 23 pathogens pathogen NNS cord-286451-ujo72w06 8 24 simultaneously simultaneously RB cord-286451-ujo72w06 8 25 , , , cord-286451-ujo72w06 8 26 which which WDT cord-286451-ujo72w06 8 27 will will MD cord-286451-ujo72w06 8 28 in in IN cord-286451-ujo72w06 8 29 turn turn VB cord-286451-ujo72w06 8 30 aid aid NN cord-286451-ujo72w06 8 31 in in IN cord-286451-ujo72w06 8 32 the the DT cord-286451-ujo72w06 8 33 treatment treatment NN cord-286451-ujo72w06 8 34 and and CC cord-286451-ujo72w06 8 35 clinical clinical JJ cord-286451-ujo72w06 8 36 management management NN cord-286451-ujo72w06 8 37 of of IN cord-286451-ujo72w06 8 38 the the DT cord-286451-ujo72w06 8 39 patient patient NN cord-286451-ujo72w06 8 40 . . . cord-286451-ujo72w06 9 1 A a DT cord-286451-ujo72w06 9 2 multiplex multiplex JJ cord-286451-ujo72w06 9 3 real real JJ cord-286451-ujo72w06 9 4 - - HYPH cord-286451-ujo72w06 9 5 time time NN cord-286451-ujo72w06 9 6 PCR PCR NNP cord-286451-ujo72w06 9 7 assay assay NN cord-286451-ujo72w06 9 8 for for IN cord-286451-ujo72w06 9 9 rapid rapid JJ cord-286451-ujo72w06 9 10 and and CC cord-286451-ujo72w06 9 11 simultaneous simultaneous JJ cord-286451-ujo72w06 9 12 detection detection NN cord-286451-ujo72w06 9 13 of of IN cord-286451-ujo72w06 9 14 HSV HSV NNP cord-286451-ujo72w06 9 15 1 1 CD cord-286451-ujo72w06 9 16 and and CC cord-286451-ujo72w06 9 17 2 2 CD cord-286451-ujo72w06 9 18 , , , cord-286451-ujo72w06 9 19 VZV VZV NNP cord-286451-ujo72w06 9 20 , , , cord-286451-ujo72w06 9 21 adenovirus adenovirus NN cord-286451-ujo72w06 9 22 and and CC cord-286451-ujo72w06 9 23 Chlamydia Chlamydia NNP cord-286451-ujo72w06 9 24 trachomatis trachomatis NN cord-286451-ujo72w06 9 25 ( ( -LRB- cord-286451-ujo72w06 9 26 C. C. NNP cord-286451-ujo72w06 9 27 trachomatis trachomatis NN cord-286451-ujo72w06 9 28 ) ) -RRB- cord-286451-ujo72w06 9 29 from from IN cord-286451-ujo72w06 9 30 eye eye NN cord-286451-ujo72w06 9 31 swabs swab NNS cord-286451-ujo72w06 9 32 was be VBD cord-286451-ujo72w06 9 33 developed develop VBN cord-286451-ujo72w06 9 34 and and CC cord-286451-ujo72w06 9 35 evaluated evaluate VBN cord-286451-ujo72w06 9 36 . . . cord-286451-ujo72w06 10 1 The the DT cord-286451-ujo72w06 10 2 multiplex multiplex JJ cord-286451-ujo72w06 10 3 assay assay NN cord-286451-ujo72w06 10 4 was be VBD cord-286451-ujo72w06 10 5 shown show VBN cord-286451-ujo72w06 10 6 to to TO cord-286451-ujo72w06 10 7 be be VB cord-286451-ujo72w06 10 8 sensitive sensitive JJ cord-286451-ujo72w06 10 9 , , , cord-286451-ujo72w06 10 10 specific specific JJ cord-286451-ujo72w06 10 11 and and CC cord-286451-ujo72w06 10 12 robust robust JJ cord-286451-ujo72w06 10 13 . . . cord-286451-ujo72w06 11 1 Reductions reduction NNS cord-286451-ujo72w06 11 2 in in IN cord-286451-ujo72w06 11 3 sample sample NN cord-286451-ujo72w06 11 4 turn turn NN cord-286451-ujo72w06 11 5 around around RP cord-286451-ujo72w06 11 6 times time NNS cord-286451-ujo72w06 11 7 have have VBP cord-286451-ujo72w06 11 8 been be VBN cord-286451-ujo72w06 11 9 achieved achieve VBN cord-286451-ujo72w06 11 10 by by IN cord-286451-ujo72w06 11 11 reducing reduce VBG cord-286451-ujo72w06 11 12 the the DT cord-286451-ujo72w06 11 13 amount amount NN cord-286451-ujo72w06 11 14 of of IN cord-286451-ujo72w06 11 15 separate separate JJ cord-286451-ujo72w06 11 16 tests test NNS cord-286451-ujo72w06 11 17 needed need VBN cord-286451-ujo72w06 11 18 to to TO cord-286451-ujo72w06 11 19 be be VB cord-286451-ujo72w06 11 20 carried carry VBN cord-286451-ujo72w06 11 21 out out RP cord-286451-ujo72w06 11 22 . . . cord-286451-ujo72w06 12 1 Infectious infectious JJ cord-286451-ujo72w06 12 2 conjunctivitis conjunctivitis NN cord-286451-ujo72w06 12 3 is be VBZ cord-286451-ujo72w06 12 4 common common JJ cord-286451-ujo72w06 12 5 and and CC cord-286451-ujo72w06 12 6 can can MD cord-286451-ujo72w06 12 7 be be VB cord-286451-ujo72w06 12 8 caused cause VBN cord-286451-ujo72w06 12 9 by by IN cord-286451-ujo72w06 12 10 viruses virus NNS cord-286451-ujo72w06 12 11 , , , cord-286451-ujo72w06 12 12 bacteria bacteria NNS cord-286451-ujo72w06 12 13 , , , cord-286451-ujo72w06 12 14 and and CC cord-286451-ujo72w06 12 15 parasites parasite NNS cord-286451-ujo72w06 12 16 . . . cord-286451-ujo72w06 13 1 Infections infection NNS cord-286451-ujo72w06 13 2 are be VBP cord-286451-ujo72w06 13 3 usually usually RB cord-286451-ujo72w06 13 4 mild mild JJ cord-286451-ujo72w06 13 5 ; ; : cord-286451-ujo72w06 13 6 however however WRB cord-286451-ujo72w06 13 7 complications complication NNS cord-286451-ujo72w06 13 8 can can MD cord-286451-ujo72w06 13 9 arise arise VB cord-286451-ujo72w06 13 10 and and CC cord-286451-ujo72w06 13 11 can can MD cord-286451-ujo72w06 13 12 be be VB cord-286451-ujo72w06 13 13 sight sight NN cord-286451-ujo72w06 13 14 - - HYPH cord-286451-ujo72w06 13 15 threatening threaten VBG cord-286451-ujo72w06 13 16 . . . cord-286451-ujo72w06 14 1 Infectious infectious JJ cord-286451-ujo72w06 14 2 conjunctivitis conjunctivitis NN cord-286451-ujo72w06 14 3 can can MD cord-286451-ujo72w06 14 4 be be VB cord-286451-ujo72w06 14 5 difficult difficult JJ cord-286451-ujo72w06 14 6 to to TO cord-286451-ujo72w06 14 7 distinguish distinguish VB cord-286451-ujo72w06 14 8 clinically clinically RB cord-286451-ujo72w06 14 9 due due JJ cord-286451-ujo72w06 14 10 to to IN cord-286451-ujo72w06 14 11 the the DT cord-286451-ujo72w06 14 12 considerable considerable JJ cord-286451-ujo72w06 14 13 overlap overlap NN cord-286451-ujo72w06 14 14 in in IN cord-286451-ujo72w06 14 15 clinical clinical JJ cord-286451-ujo72w06 14 16 presentation presentation NN cord-286451-ujo72w06 14 17 so so IN cord-286451-ujo72w06 14 18 clinical clinical JJ cord-286451-ujo72w06 14 19 diagnosis diagnosis NN cord-286451-ujo72w06 14 20 of of IN cord-286451-ujo72w06 14 21 conjunctivitis conjunctivitis NN cord-286451-ujo72w06 14 22 is be VBZ cord-286451-ujo72w06 14 23 often often RB cord-286451-ujo72w06 14 24 insufficient insufficient JJ cord-286451-ujo72w06 15 1 ( ( -LRB- cord-286451-ujo72w06 15 2 O'Brien O'Brien NNP cord-286451-ujo72w06 15 3 et et NNP cord-286451-ujo72w06 15 4 al al NNP cord-286451-ujo72w06 15 5 . . NNP cord-286451-ujo72w06 15 6 , , , cord-286451-ujo72w06 15 7 2009 2009 CD cord-286451-ujo72w06 15 8 ) ) -RRB- cord-286451-ujo72w06 15 9 . . . cord-286451-ujo72w06 16 1 This this DT cord-286451-ujo72w06 16 2 can can MD cord-286451-ujo72w06 16 3 lead lead VB cord-286451-ujo72w06 16 4 to to IN cord-286451-ujo72w06 16 5 misdiagnosis misdiagnosis NN cord-286451-ujo72w06 16 6 resulting result VBG cord-286451-ujo72w06 16 7 in in IN cord-286451-ujo72w06 16 8 misuse misuse NN cord-286451-ujo72w06 16 9 of of IN cord-286451-ujo72w06 16 10 antibiotics antibiotic NNS cord-286451-ujo72w06 16 11 , , , cord-286451-ujo72w06 16 12 antibiotic antibiotic JJ cord-286451-ujo72w06 16 13 resistance resistance NN cord-286451-ujo72w06 16 14 , , , cord-286451-ujo72w06 16 15 and and CC cord-286451-ujo72w06 16 16 subsequently subsequently RB cord-286451-ujo72w06 16 17 unnecessary unnecessary JJ cord-286451-ujo72w06 16 18 costs cost NNS cord-286451-ujo72w06 16 19 ( ( -LRB- cord-286451-ujo72w06 16 20 Thanathanee Thanathanee NNP cord-286451-ujo72w06 16 21 and and CC cord-286451-ujo72w06 16 22 O'Brien O'Brien NNP cord-286451-ujo72w06 16 23 , , , cord-286451-ujo72w06 16 24 2011 2011 CD cord-286451-ujo72w06 16 25 ) ) -RRB- cord-286451-ujo72w06 16 26 . . . cord-286451-ujo72w06 17 1 It -PRON- PRP cord-286451-ujo72w06 17 2 is be VBZ cord-286451-ujo72w06 17 3 therefore therefore RB cord-286451-ujo72w06 17 4 necessary necessary JJ cord-286451-ujo72w06 17 5 to to TO cord-286451-ujo72w06 17 6 have have VB cord-286451-ujo72w06 17 7 a a DT cord-286451-ujo72w06 17 8 rapid rapid JJ cord-286451-ujo72w06 17 9 diagnostic diagnostic JJ cord-286451-ujo72w06 17 10 test test NN cord-286451-ujo72w06 17 11 that that WDT cord-286451-ujo72w06 17 12 differentiates differentiate VBZ cord-286451-ujo72w06 17 13 between between IN cord-286451-ujo72w06 17 14 the the DT cord-286451-ujo72w06 17 15 different different JJ cord-286451-ujo72w06 17 16 causes cause NNS cord-286451-ujo72w06 17 17 of of IN cord-286451-ujo72w06 17 18 infective infective JJ cord-286451-ujo72w06 17 19 conjunctivitis conjunctivitis NN cord-286451-ujo72w06 17 20 . . . cord-286451-ujo72w06 18 1 Traditional traditional JJ cord-286451-ujo72w06 18 2 detection detection NN cord-286451-ujo72w06 18 3 methods method NNS cord-286451-ujo72w06 18 4 for for IN cord-286451-ujo72w06 18 5 virus virus NN cord-286451-ujo72w06 18 6 detection detection NN cord-286451-ujo72w06 18 7 rely rely VBP cord-286451-ujo72w06 18 8 on on IN cord-286451-ujo72w06 18 9 often often RB cord-286451-ujo72w06 18 10 slow slow JJ cord-286451-ujo72w06 18 11 , , , cord-286451-ujo72w06 18 12 laborious laborious JJ cord-286451-ujo72w06 18 13 and and CC cord-286451-ujo72w06 18 14 insensitive insensitive JJ cord-286451-ujo72w06 18 15 cell cell NN cord-286451-ujo72w06 18 16 culturing culturing NN cord-286451-ujo72w06 18 17 , , , cord-286451-ujo72w06 18 18 which which WDT cord-286451-ujo72w06 18 19 has have VBZ cord-286451-ujo72w06 18 20 now now RB cord-286451-ujo72w06 18 21 been be VBN cord-286451-ujo72w06 18 22 largely largely RB cord-286451-ujo72w06 18 23 replaced replace VBN cord-286451-ujo72w06 18 24 by by IN cord-286451-ujo72w06 18 25 nucleic nucleic JJ cord-286451-ujo72w06 18 26 acid acid NN cord-286451-ujo72w06 18 27 amplification amplification NN cord-286451-ujo72w06 18 28 tests test NNS cord-286451-ujo72w06 18 29 . . . cord-286451-ujo72w06 19 1 PCR PCR NNP cord-286451-ujo72w06 19 2 is be VBZ cord-286451-ujo72w06 19 3 usually usually RB cord-286451-ujo72w06 19 4 carried carry VBN cord-286451-ujo72w06 19 5 out out RP cord-286451-ujo72w06 19 6 as as IN cord-286451-ujo72w06 19 7 a a DT cord-286451-ujo72w06 19 8 single single JJ cord-286451-ujo72w06 19 9 test test NN cord-286451-ujo72w06 19 10 for for IN cord-286451-ujo72w06 19 11 each each DT cord-286451-ujo72w06 19 12 pathogen pathogen NN cord-286451-ujo72w06 19 13 and and CC cord-286451-ujo72w06 19 14 tests test NNS cord-286451-ujo72w06 19 15 for for IN cord-286451-ujo72w06 19 16 all all DT cord-286451-ujo72w06 19 17 pathogens pathogen NNS cord-286451-ujo72w06 19 18 are be VBP cord-286451-ujo72w06 19 19 not not RB cord-286451-ujo72w06 19 20 always always RB cord-286451-ujo72w06 19 21 available available JJ cord-286451-ujo72w06 19 22 at at IN cord-286451-ujo72w06 19 23 the the DT cord-286451-ujo72w06 19 24 same same JJ cord-286451-ujo72w06 19 25 site site NN cord-286451-ujo72w06 19 26 . . . cord-286451-ujo72w06 20 1 Screening screen VBG cord-286451-ujo72w06 20 2 clinical clinical JJ cord-286451-ujo72w06 20 3 samples sample NNS cord-286451-ujo72w06 20 4 by by IN cord-286451-ujo72w06 20 5 sample sample NN cord-286451-ujo72w06 20 6 type type NN cord-286451-ujo72w06 20 7 / / SYM cord-286451-ujo72w06 20 8 syndrome syndrome NN cord-286451-ujo72w06 20 9 based base VBN cord-286451-ujo72w06 20 10 multiplex multiplex JJ cord-286451-ujo72w06 20 11 real real JJ cord-286451-ujo72w06 20 12 time time NN cord-286451-ujo72w06 20 13 PCR PCR NNP cord-286451-ujo72w06 20 14 would would MD cord-286451-ujo72w06 20 15 allow allow VB cord-286451-ujo72w06 20 16 for for IN cord-286451-ujo72w06 20 17 rapid rapid JJ cord-286451-ujo72w06 20 18 detection detection NN cord-286451-ujo72w06 20 19 of of IN cord-286451-ujo72w06 20 20 a a DT cord-286451-ujo72w06 20 21 variety variety NN cord-286451-ujo72w06 20 22 of of IN cord-286451-ujo72w06 20 23 pathogens pathogen NNS cord-286451-ujo72w06 20 24 simultaneously simultaneously RB cord-286451-ujo72w06 20 25 , , , cord-286451-ujo72w06 20 26 which which WDT cord-286451-ujo72w06 20 27 will will MD cord-286451-ujo72w06 20 28 in in IN cord-286451-ujo72w06 20 29 turn turn VB cord-286451-ujo72w06 20 30 aid aid NN cord-286451-ujo72w06 20 31 in in IN cord-286451-ujo72w06 20 32 the the DT cord-286451-ujo72w06 20 33 treatment treatment NN cord-286451-ujo72w06 20 34 and and CC cord-286451-ujo72w06 20 35 clinical clinical JJ cord-286451-ujo72w06 20 36 management management NN cord-286451-ujo72w06 20 37 of of IN cord-286451-ujo72w06 20 38 the the DT cord-286451-ujo72w06 20 39 patient patient NN cord-286451-ujo72w06 20 40 . . . cord-286451-ujo72w06 21 1 A a DT cord-286451-ujo72w06 21 2 multiplex multiplex JJ cord-286451-ujo72w06 21 3 real real JJ cord-286451-ujo72w06 21 4 - - HYPH cord-286451-ujo72w06 21 5 time time NN cord-286451-ujo72w06 21 6 PCR pcr NN cord-286451-ujo72w06 21 7 assay assay NN cord-286451-ujo72w06 21 8 for for IN cord-286451-ujo72w06 21 9 the the DT cord-286451-ujo72w06 21 10 rapid rapid JJ cord-286451-ujo72w06 21 11 and and CC cord-286451-ujo72w06 21 12 simultaneous simultaneous JJ cord-286451-ujo72w06 21 13 detection detection NN cord-286451-ujo72w06 21 14 of of IN cord-286451-ujo72w06 21 15 HSV HSV NNP cord-286451-ujo72w06 21 16 1 1 CD cord-286451-ujo72w06 21 17 and and CC cord-286451-ujo72w06 21 18 2 2 CD cord-286451-ujo72w06 21 19 , , , cord-286451-ujo72w06 21 20 VZV VZV NNP cord-286451-ujo72w06 21 21 , , , cord-286451-ujo72w06 21 22 adenovirus adenovirus NN cord-286451-ujo72w06 21 23 and and CC cord-286451-ujo72w06 21 24 C. C. NNP cord-286451-ujo72w06 21 25 trachomatis trachomatis NN cord-286451-ujo72w06 21 26 from from IN cord-286451-ujo72w06 21 27 eye eye NN cord-286451-ujo72w06 21 28 swabs swab NNS cord-286451-ujo72w06 21 29 has have VBZ cord-286451-ujo72w06 21 30 been be VBN cord-286451-ujo72w06 21 31 developed develop VBN cord-286451-ujo72w06 21 32 and and CC cord-286451-ujo72w06 21 33 evaluated evaluate VBN cord-286451-ujo72w06 21 34 . . . cord-286451-ujo72w06 22 1 The the DT cord-286451-ujo72w06 22 2 HSV1/2 HSV1/2 NNP cord-286451-ujo72w06 22 3 , , , cord-286451-ujo72w06 22 4 VZV VZV NNP cord-286451-ujo72w06 22 5 and and CC cord-286451-ujo72w06 22 6 adenovirus adenovirus NN cord-286451-ujo72w06 22 7 assays assay NNS cord-286451-ujo72w06 22 8 used use VBN cord-286451-ujo72w06 22 9 in in IN cord-286451-ujo72w06 22 10 the the DT cord-286451-ujo72w06 22 11 multiplex multiplex NN cord-286451-ujo72w06 22 12 were be VBD cord-286451-ujo72w06 22 13 published publish VBN cord-286451-ujo72w06 22 14 previously previously RB cord-286451-ujo72w06 23 1 ( ( -LRB- cord-286451-ujo72w06 23 2 Ryncarz Ryncarz NNP cord-286451-ujo72w06 23 3 et et NNP cord-286451-ujo72w06 23 4 al al NNP cord-286451-ujo72w06 23 5 . . NNP cord-286451-ujo72w06 23 6 , , , cord-286451-ujo72w06 23 7 1999 1999 CD cord-286451-ujo72w06 23 8 ; ; : cord-286451-ujo72w06 23 9 van van NNP cord-286451-ujo72w06 23 10 Doornum Doornum NNP cord-286451-ujo72w06 23 11 et et NNP cord-286451-ujo72w06 23 12 al al NNP cord-286451-ujo72w06 23 13 . . NNP cord-286451-ujo72w06 23 14 , , , cord-286451-ujo72w06 23 15 2003 2003 CD cord-286451-ujo72w06 23 16 ; ; : cord-286451-ujo72w06 23 17 Hawrami Hawrami NNP cord-286451-ujo72w06 23 18 and and CC cord-286451-ujo72w06 23 19 Breuer Breuer NNP cord-286451-ujo72w06 23 20 , , , cord-286451-ujo72w06 23 21 1999 1999 CD cord-286451-ujo72w06 23 22 ; ; : cord-286451-ujo72w06 23 23 Heim Heim NNP cord-286451-ujo72w06 23 24 et et NNP cord-286451-ujo72w06 23 25 al al NNP cord-286451-ujo72w06 23 26 . . NNP cord-286451-ujo72w06 23 27 , , , cord-286451-ujo72w06 23 28 2003 2003 CD cord-286451-ujo72w06 23 29 ) ) -RRB- cord-286451-ujo72w06 23 30 . . . cord-286451-ujo72w06 24 1 These these DT cord-286451-ujo72w06 24 2 assays assay NNS cord-286451-ujo72w06 24 3 have have VBP cord-286451-ujo72w06 24 4 been be VBN cord-286451-ujo72w06 24 5 shown show VBN cord-286451-ujo72w06 24 6 to to TO cord-286451-ujo72w06 24 7 be be VB cord-286451-ujo72w06 24 8 sensitive sensitive JJ cord-286451-ujo72w06 24 9 and and CC cord-286451-ujo72w06 24 10 specific specific JJ cord-286451-ujo72w06 24 11 , , , cord-286451-ujo72w06 24 12 and and CC cord-286451-ujo72w06 24 13 to to TO cord-286451-ujo72w06 24 14 detect detect VB cord-286451-ujo72w06 24 15 all all DT cord-286451-ujo72w06 24 16 strains strain NNS cord-286451-ujo72w06 24 17 . . . cord-286451-ujo72w06 25 1 The the DT cord-286451-ujo72w06 25 2 C. C. NNP cord-286451-ujo72w06 25 3 trachomatis trachomatis NN cord-286451-ujo72w06 25 4 assay assay NN cord-286451-ujo72w06 25 5 was be VBD cord-286451-ujo72w06 25 6 developed develop VBN cord-286451-ujo72w06 25 7 in in IN cord-286451-ujo72w06 25 8 - - HYPH cord-286451-ujo72w06 25 9 house house NN cord-286451-ujo72w06 25 10 ( ( -LRB- cord-286451-ujo72w06 25 11 see see VB cord-286451-ujo72w06 25 12 below below RB cord-286451-ujo72w06 25 13 ) ) -RRB- cord-286451-ujo72w06 25 14 . . . cord-286451-ujo72w06 26 1 A a DT cord-286451-ujo72w06 26 2 C. C. NNP cord-286451-ujo72w06 26 3 trachomatis trachomatis NN cord-286451-ujo72w06 26 4 assay assay NN cord-286451-ujo72w06 26 5 was be VBD cord-286451-ujo72w06 26 6 designed design VBN cord-286451-ujo72w06 26 7 in in IN cord-286451-ujo72w06 26 8 - - HYPH cord-286451-ujo72w06 26 9 house house NN cord-286451-ujo72w06 26 10 using use VBG cord-286451-ujo72w06 26 11 primer primer NN cord-286451-ujo72w06 26 12 express express NNP cord-286451-ujo72w06 26 13 TM TM NNP cord-286451-ujo72w06 26 14 ( ( -LRB- cord-286451-ujo72w06 26 15 Applied Applied NNP cord-286451-ujo72w06 26 16 Biosystems Biosystems NNP cord-286451-ujo72w06 26 17 ) ) -RRB- cord-286451-ujo72w06 26 18 . . . cord-286451-ujo72w06 27 1 Primers primer NNS cord-286451-ujo72w06 27 2 and and CC cord-286451-ujo72w06 27 3 probes probe NNS cord-286451-ujo72w06 27 4 were be VBD cord-286451-ujo72w06 27 5 developed develop VBN cord-286451-ujo72w06 27 6 to to TO cord-286451-ujo72w06 27 7 target target VB cord-286451-ujo72w06 27 8 the the DT cord-286451-ujo72w06 27 9 cryptic cryptic JJ cord-286451-ujo72w06 27 10 plasmid plasmid NN cord-286451-ujo72w06 27 11 ( ( -LRB- cord-286451-ujo72w06 27 12 sequences sequence NNS cord-286451-ujo72w06 27 13 given give VBN cord-286451-ujo72w06 27 14 in in IN cord-286451-ujo72w06 27 15 Table Table NNP cord-286451-ujo72w06 27 16 1 1 CD cord-286451-ujo72w06 27 17 ) ) -RRB- cord-286451-ujo72w06 27 18 . . . cord-286451-ujo72w06 28 1 Primers primer NNS cord-286451-ujo72w06 28 2 and and CC cord-286451-ujo72w06 28 3 probes probe NNS cord-286451-ujo72w06 28 4 were be VBD cord-286451-ujo72w06 28 5 then then RB cord-286451-ujo72w06 28 6 compared compare VBN cord-286451-ujo72w06 28 7 to to IN cord-286451-ujo72w06 28 8 all all DT cord-286451-ujo72w06 28 9 sequences sequence NNS cord-286451-ujo72w06 28 10 available available JJ cord-286451-ujo72w06 28 11 in in IN cord-286451-ujo72w06 28 12 BLAST blast NN cord-286451-ujo72w06 28 13 ( ( -LRB- cord-286451-ujo72w06 28 14 www.ncbi.nlm.nih.gov/blast www.ncbi.nlm.nih.gov/blast NN cord-286451-ujo72w06 28 15 ) ) -RRB- cord-286451-ujo72w06 28 16 and and CC cord-286451-ujo72w06 28 17 shown show VBN cord-286451-ujo72w06 28 18 to to TO cord-286451-ujo72w06 28 19 only only RB cord-286451-ujo72w06 28 20 detect detect VB cord-286451-ujo72w06 28 21 all all DT cord-286451-ujo72w06 28 22 serovars serovar NNS cord-286451-ujo72w06 28 23 of of IN cord-286451-ujo72w06 28 24 C. C. NNP cord-286451-ujo72w06 28 25 trachomatis trachomatis NN cord-286451-ujo72w06 28 26 including include VBG cord-286451-ujo72w06 28 27 the the DT cord-286451-ujo72w06 28 28 Swedish swedish JJ cord-286451-ujo72w06 28 29 variant variant NN cord-286451-ujo72w06 28 30 ( ( -LRB- cord-286451-ujo72w06 28 31 sw sw NNP cord-286451-ujo72w06 28 32 C. C. NNP cord-286451-ujo72w06 28 33 trachomatis trachomatis NN cord-286451-ujo72w06 28 34 ) ) -RRB- cord-286451-ujo72w06 28 35 discovered discover VBD cord-286451-ujo72w06 28 36 in in IN cord-286451-ujo72w06 28 37 2006 2006 CD cord-286451-ujo72w06 28 38 . . . cord-286451-ujo72w06 29 1 No no DT cord-286451-ujo72w06 29 2 interfering interfere VBG cord-286451-ujo72w06 29 3 Table table NN cord-286451-ujo72w06 29 4 1 1 CD cord-286451-ujo72w06 29 5 Primer primer NN cord-286451-ujo72w06 29 6 and and CC cord-286451-ujo72w06 29 7 probe probe NN cord-286451-ujo72w06 29 8 sequences sequence NNS cord-286451-ujo72w06 29 9 . . . cord-286451-ujo72w06 29 10 _SP cord-286451-ujo72w06 30 1 This this DT cord-286451-ujo72w06 30 2 publication publication NN cord-286451-ujo72w06 30 3 secondary secondary JJ cord-286451-ujo72w06 30 4 structures structure NNS cord-286451-ujo72w06 30 5 were be VBD cord-286451-ujo72w06 30 6 observed observe VBN cord-286451-ujo72w06 30 7 using use VBG cord-286451-ujo72w06 30 8 the the DT cord-286451-ujo72w06 30 9 mfold mfold NN cord-286451-ujo72w06 30 10 algorithm algorithm NN cord-286451-ujo72w06 30 11 ( ( -LRB- cord-286451-ujo72w06 30 12 www.bioinfo.rpi.edu www.bioinfo.rpi.edu NNP cord-286451-ujo72w06 30 13 ) ) -RRB- cord-286451-ujo72w06 30 14 . . . cord-286451-ujo72w06 31 1 2.3 2.3 CD cord-286451-ujo72w06 31 2 . . . cord-286451-ujo72w06 32 1 Assessment assessment NN cord-286451-ujo72w06 32 2 of of IN cord-286451-ujo72w06 32 3 the the DT cord-286451-ujo72w06 32 4 C. C. NNP cord-286451-ujo72w06 32 5 trachomatis trachomatis NN cord-286451-ujo72w06 32 6 real real JJ cord-286451-ujo72w06 32 7 time time NN cord-286451-ujo72w06 32 8 assay assay NN cord-286451-ujo72w06 32 9 2.3.1 2.3.1 CD cord-286451-ujo72w06 32 10 . . . cord-286451-ujo72w06 33 1 Endpoint endpoint NN cord-286451-ujo72w06 33 2 sensitivity sensitivity NN cord-286451-ujo72w06 34 1 The the DT cord-286451-ujo72w06 34 2 C. C. NNP cord-286451-ujo72w06 34 3 trachomatis trachomatis NN cord-286451-ujo72w06 34 4 assay assay NN cord-286451-ujo72w06 34 5 was be VBD cord-286451-ujo72w06 34 6 compared compare VBN cord-286451-ujo72w06 34 7 to to IN cord-286451-ujo72w06 34 8 a a DT cord-286451-ujo72w06 34 9 fully fully RB cord-286451-ujo72w06 34 10 automated automate VBN cord-286451-ujo72w06 34 11 commercial commercial JJ cord-286451-ujo72w06 34 12 extraction extraction NN cord-286451-ujo72w06 34 13 and and CC cord-286451-ujo72w06 34 14 real real JJ cord-286451-ujo72w06 34 15 - - HYPH cord-286451-ujo72w06 34 16 time time NN cord-286451-ujo72w06 34 17 PCR pcr NN cord-286451-ujo72w06 34 18 system system NN cord-286451-ujo72w06 34 19 , , , cord-286451-ujo72w06 34 20 the the DT cord-286451-ujo72w06 34 21 Abbott Abbott NNP cord-286451-ujo72w06 34 22 RealTime RealTime NNP cord-286451-ujo72w06 34 23 Chlamydia Chlamydia NNP cord-286451-ujo72w06 34 24 trachomatis trachomatis NN cord-286451-ujo72w06 34 25 / / SYM cord-286451-ujo72w06 34 26 Neisseria Neisseria NNP cord-286451-ujo72w06 34 27 gonorrhoea gonorrhoea NN cord-286451-ujo72w06 34 28 ( ( -LRB- cord-286451-ujo72w06 34 29 CT CT NNP cord-286451-ujo72w06 34 30 / / SYM cord-286451-ujo72w06 34 31 NG NG NNP cord-286451-ujo72w06 34 32 ) ) -RRB- cord-286451-ujo72w06 34 33 PCR pcr NN cord-286451-ujo72w06 34 34 assay assay NN cord-286451-ujo72w06 34 35 ( ( -LRB- cord-286451-ujo72w06 34 36 Abbott Abbott NNP cord-286451-ujo72w06 34 37 , , , cord-286451-ujo72w06 34 38 Maidenhead Maidenhead NNP cord-286451-ujo72w06 34 39 , , , cord-286451-ujo72w06 34 40 UK UK NNP cord-286451-ujo72w06 34 41 ) ) -RRB- cord-286451-ujo72w06 34 42 , , , cord-286451-ujo72w06 34 43 by by IN cord-286451-ujo72w06 34 44 comparing compare VBG cord-286451-ujo72w06 34 45 endpoint endpoint NN cord-286451-ujo72w06 34 46 sensitivity sensitivity NN cord-286451-ujo72w06 34 47 using use VBG cord-286451-ujo72w06 34 48 a a DT cord-286451-ujo72w06 34 49 dilution dilution NN cord-286451-ujo72w06 34 50 series series NN cord-286451-ujo72w06 34 51 of of IN cord-286451-ujo72w06 34 52 a a DT cord-286451-ujo72w06 34 53 positive positive JJ cord-286451-ujo72w06 34 54 clinical clinical JJ cord-286451-ujo72w06 34 55 sample sample NN cord-286451-ujo72w06 34 56 . . . cord-286451-ujo72w06 35 1 The the DT cord-286451-ujo72w06 35 2 C. C. NNP cord-286451-ujo72w06 35 3 trachomatis trachomatis NN cord-286451-ujo72w06 35 4 assay assay NN cord-286451-ujo72w06 35 5 was be VBD cord-286451-ujo72w06 35 6 further further RB cord-286451-ujo72w06 35 7 evaluated evaluate VBN cord-286451-ujo72w06 35 8 using use VBG cord-286451-ujo72w06 35 9 the the DT cord-286451-ujo72w06 35 10 Quality Quality NNP cord-286451-ujo72w06 35 11 _SP cord-286451-ujo72w06 36 1 Each each DT cord-286451-ujo72w06 36 2 probe probe NN cord-286451-ujo72w06 36 3 was be VBD cord-286451-ujo72w06 36 4 labelled label VBN cord-286451-ujo72w06 36 5 with with IN cord-286451-ujo72w06 36 6 a a DT cord-286451-ujo72w06 36 7 different different JJ cord-286451-ujo72w06 36 8 fluorescent fluorescent NN cord-286451-ujo72w06 36 9 dye dye NN cord-286451-ujo72w06 36 10 ( ( -LRB- cord-286451-ujo72w06 36 11 Table table NN cord-286451-ujo72w06 36 12 1 1 CD cord-286451-ujo72w06 36 13 ) ) -RRB- cord-286451-ujo72w06 36 14 ; ; : cord-286451-ujo72w06 36 15 in in IN cord-286451-ujo72w06 36 16 the the DT cord-286451-ujo72w06 36 17 case case NN cord-286451-ujo72w06 36 18 of of IN cord-286451-ujo72w06 36 19 HSV HSV NNP cord-286451-ujo72w06 36 20 the the DT cord-286451-ujo72w06 36 21 HSV HSV NNP cord-286451-ujo72w06 36 22 1 1 CD cord-286451-ujo72w06 36 23 and and CC cord-286451-ujo72w06 36 24 2 2 CD cord-286451-ujo72w06 36 25 probes probe NNS cord-286451-ujo72w06 36 26 were be VBD cord-286451-ujo72w06 36 27 labelled label VBN cord-286451-ujo72w06 36 28 with with IN cord-286451-ujo72w06 36 29 the the DT cord-286451-ujo72w06 36 30 same same JJ cord-286451-ujo72w06 36 31 fluorescent fluorescent NN cord-286451-ujo72w06 36 32 dye dye NN cord-286451-ujo72w06 36 33 , , , cord-286451-ujo72w06 36 34 atto647 atto647 VBN cord-286451-ujo72w06 36 35 . . . cord-286451-ujo72w06 37 1 This this DT cord-286451-ujo72w06 37 2 enabled enable VBD cord-286451-ujo72w06 37 3 the the DT cord-286451-ujo72w06 37 4 detection detection NN cord-286451-ujo72w06 37 5 of of IN cord-286451-ujo72w06 37 6 all all DT cord-286451-ujo72w06 37 7 5 5 CD cord-286451-ujo72w06 37 8 pathogens pathogen NNS cord-286451-ujo72w06 37 9 in in IN cord-286451-ujo72w06 37 10 one one CD cord-286451-ujo72w06 37 11 multiplex multiplex NN cord-286451-ujo72w06 37 12 screen screen NN cord-286451-ujo72w06 37 13 and and CC cord-286451-ujo72w06 37 14 also also RB cord-286451-ujo72w06 37 15 reduced reduce VBD cord-286451-ujo72w06 37 16 the the DT cord-286451-ujo72w06 37 17 risk risk NN cord-286451-ujo72w06 37 18 of of IN cord-286451-ujo72w06 37 19 cross cross NN cord-286451-ujo72w06 37 20 - - NN cord-286451-ujo72w06 37 21 talk talk NN cord-286451-ujo72w06 37 22 between between IN cord-286451-ujo72w06 37 23 dyes dye NNS cord-286451-ujo72w06 37 24 . . . cord-286451-ujo72w06 38 1 The the DT cord-286451-ujo72w06 38 2 inability inability NN cord-286451-ujo72w06 38 3 to to TO cord-286451-ujo72w06 38 4 differentiate differentiate VB cord-286451-ujo72w06 38 5 between between IN cord-286451-ujo72w06 38 6 HSV HSV NNP cord-286451-ujo72w06 38 7 1 1 CD cord-286451-ujo72w06 38 8 and and CC cord-286451-ujo72w06 38 9 2 2 CD cord-286451-ujo72w06 38 10 was be VBD cord-286451-ujo72w06 38 11 discussed discuss VBN cord-286451-ujo72w06 38 12 with with IN cord-286451-ujo72w06 38 13 our -PRON- PRP$ cord-286451-ujo72w06 38 14 users user NNS cord-286451-ujo72w06 38 15 prior prior RB cord-286451-ujo72w06 38 16 to to IN cord-286451-ujo72w06 38 17 development development NN cord-286451-ujo72w06 38 18 . . . cord-286451-ujo72w06 39 1 Our -PRON- PRP$ cord-286451-ujo72w06 39 2 users user NNS cord-286451-ujo72w06 39 3 agreed agree VBD cord-286451-ujo72w06 39 4 it -PRON- PRP cord-286451-ujo72w06 39 5 was be VBD cord-286451-ujo72w06 39 6 sufficient sufficient JJ cord-286451-ujo72w06 39 7 to to TO cord-286451-ujo72w06 39 8 detect detect VB cord-286451-ujo72w06 39 9 both both DT cord-286451-ujo72w06 39 10 HSV HSV NNP cord-286451-ujo72w06 39 11 1 1 CD cord-286451-ujo72w06 39 12 and and CC cord-286451-ujo72w06 39 13 2 2 CD cord-286451-ujo72w06 39 14 on on IN cord-286451-ujo72w06 39 15 the the DT cord-286451-ujo72w06 39 16 same same JJ cord-286451-ujo72w06 39 17 dye dye NN cord-286451-ujo72w06 39 18 . . . cord-286451-ujo72w06 40 1 Optimisation optimisation NN cord-286451-ujo72w06 40 2 of of IN cord-286451-ujo72w06 40 3 the the DT cord-286451-ujo72w06 40 4 HSV HSV NNP cord-286451-ujo72w06 40 5 probes probe NNS cord-286451-ujo72w06 40 6 had have VBD cord-286451-ujo72w06 40 7 to to TO cord-286451-ujo72w06 40 8 ensure ensure VB cord-286451-ujo72w06 40 9 that that IN cord-286451-ujo72w06 40 10 both both DT cord-286451-ujo72w06 40 11 probes probe NNS cord-286451-ujo72w06 40 12 produced produce VBD cord-286451-ujo72w06 40 13 similar similar JJ cord-286451-ujo72w06 40 14 levels level NNS cord-286451-ujo72w06 40 15 of of IN cord-286451-ujo72w06 40 16 fluorescence fluorescence NN cord-286451-ujo72w06 40 17 . . . cord-286451-ujo72w06 41 1 The the DT cord-286451-ujo72w06 41 2 primer primer NN cord-286451-ujo72w06 41 3 probe probe NN cord-286451-ujo72w06 41 4 concentrations concentration NNS cord-286451-ujo72w06 41 5 for for IN cord-286451-ujo72w06 41 6 all all DT cord-286451-ujo72w06 41 7 assays assay NNS cord-286451-ujo72w06 41 8 , , , cord-286451-ujo72w06 41 9 singleton singleton JJ cord-286451-ujo72w06 41 10 and and CC cord-286451-ujo72w06 41 11 multiplex multiplex NN cord-286451-ujo72w06 41 12 , , , cord-286451-ujo72w06 41 13 were be VBD cord-286451-ujo72w06 41 14 individually individually RB cord-286451-ujo72w06 41 15 optimised optimise VBN cord-286451-ujo72w06 41 16 using use VBG cord-286451-ujo72w06 41 17 in in IN cord-286451-ujo72w06 41 18 - - HYPH cord-286451-ujo72w06 41 19 house house NN cord-286451-ujo72w06 41 20 protocols protocol NNS cord-286451-ujo72w06 41 21 ( ( -LRB- cord-286451-ujo72w06 41 22 Gunson Gunson NNP cord-286451-ujo72w06 41 23 et et FW cord-286451-ujo72w06 41 24 al al NNP cord-286451-ujo72w06 41 25 . . NNP cord-286451-ujo72w06 41 26 , , , cord-286451-ujo72w06 41 27 2003 2003 CD cord-286451-ujo72w06 41 28 ) ) -RRB- cord-286451-ujo72w06 41 29 , , , cord-286451-ujo72w06 41 30 all all DT cord-286451-ujo72w06 41 31 primers primer NNS cord-286451-ujo72w06 41 32 and and CC cord-286451-ujo72w06 41 33 probes probe NNS cord-286451-ujo72w06 41 34 are be VBP cord-286451-ujo72w06 41 35 shown show VBN cord-286451-ujo72w06 41 36 in in IN cord-286451-ujo72w06 41 37 Table Table NNP cord-286451-ujo72w06 41 38 1 1 CD cord-286451-ujo72w06 41 39 . . . cord-286451-ujo72w06 42 1 The the DT cord-286451-ujo72w06 42 2 VZV VZV NNP cord-286451-ujo72w06 42 3 probe probe NN cord-286451-ujo72w06 42 4 and and CC cord-286451-ujo72w06 42 5 all all DT cord-286451-ujo72w06 42 6 primers primer NNS cord-286451-ujo72w06 42 7 where where WRB cord-286451-ujo72w06 42 8 purchased purchase VBN cord-286451-ujo72w06 42 9 from from IN cord-286451-ujo72w06 42 10 Applied Applied NNP cord-286451-ujo72w06 42 11 Biosystems Biosystems NNP cord-286451-ujo72w06 42 12 ( ( -LRB- cord-286451-ujo72w06 42 13 Cheshire Cheshire NNP cord-286451-ujo72w06 42 14 , , , cord-286451-ujo72w06 42 15 UK UK NNP cord-286451-ujo72w06 42 16 ) ) -RRB- cord-286451-ujo72w06 42 17 . . . cord-286451-ujo72w06 43 1 The the DT cord-286451-ujo72w06 43 2 remaining remain VBG cord-286451-ujo72w06 43 3 probes probe NNS cord-286451-ujo72w06 43 4 were be VBD cord-286451-ujo72w06 43 5 purchased purchase VBN cord-286451-ujo72w06 43 6 from from IN cord-286451-ujo72w06 43 7 Eurogentec Eurogentec NNP cord-286451-ujo72w06 43 8 ( ( -LRB- cord-286451-ujo72w06 43 9 Seraing Seraing NNP cord-286451-ujo72w06 43 10 , , , cord-286451-ujo72w06 43 11 Belgium Belgium NNP cord-286451-ujo72w06 43 12 ) ) -RRB- cord-286451-ujo72w06 43 13 . . . cord-286451-ujo72w06 44 1 The the DT cord-286451-ujo72w06 44 2 optimised optimise VBN cord-286451-ujo72w06 44 3 concentration concentration NN cord-286451-ujo72w06 44 4 for for IN cord-286451-ujo72w06 44 5 each each DT cord-286451-ujo72w06 44 6 probe probe NN cord-286451-ujo72w06 44 7 was be VBD cord-286451-ujo72w06 44 8 25 25 CD cord-286451-ujo72w06 44 9 M M NNP cord-286451-ujo72w06 44 10 and and CC cord-286451-ujo72w06 44 11 for for IN cord-286451-ujo72w06 44 12 each each DT cord-286451-ujo72w06 44 13 primer primer NN cord-286451-ujo72w06 44 14 100 100 CD cord-286451-ujo72w06 44 15 M. m. NN cord-286451-ujo72w06 45 1 The the DT cord-286451-ujo72w06 45 2 endpoint endpoint NN cord-286451-ujo72w06 45 3 detection detection NN cord-286451-ujo72w06 45 4 limits limit NNS cord-286451-ujo72w06 45 5 of of IN cord-286451-ujo72w06 45 6 each each DT cord-286451-ujo72w06 45 7 component component NN cord-286451-ujo72w06 45 8 in in IN cord-286451-ujo72w06 45 9 the the DT cord-286451-ujo72w06 45 10 multiplex multiplex NN cord-286451-ujo72w06 45 11 were be VBD cord-286451-ujo72w06 45 12 directly directly RB cord-286451-ujo72w06 45 13 compared compare VBN cord-286451-ujo72w06 45 14 to to IN cord-286451-ujo72w06 45 15 the the DT cord-286451-ujo72w06 45 16 current current JJ cord-286451-ujo72w06 45 17 routine routine JJ cord-286451-ujo72w06 45 18 single single JJ cord-286451-ujo72w06 45 19 assays assay NNS cord-286451-ujo72w06 45 20 using use VBG cord-286451-ujo72w06 45 21 a a DT cord-286451-ujo72w06 45 22 dilution dilution NN cord-286451-ujo72w06 45 23 series series NN cord-286451-ujo72w06 45 24 of of IN cord-286451-ujo72w06 45 25 positive positive JJ cord-286451-ujo72w06 45 26 controls control NNS cord-286451-ujo72w06 45 27 for for IN cord-286451-ujo72w06 45 28 each each DT cord-286451-ujo72w06 45 29 target target NN cord-286451-ujo72w06 45 30 . . . cord-286451-ujo72w06 46 1 These these DT cord-286451-ujo72w06 46 2 were be VBD cord-286451-ujo72w06 46 3 carried carry VBN cord-286451-ujo72w06 46 4 out out RP cord-286451-ujo72w06 46 5 to to TO cord-286451-ujo72w06 46 6 ensure ensure VB cord-286451-ujo72w06 46 7 that that IN cord-286451-ujo72w06 46 8 multiplexing multiplexe VBG cord-286451-ujo72w06 46 9 the the DT cord-286451-ujo72w06 46 10 assays assay NNS cord-286451-ujo72w06 46 11 did do VBD cord-286451-ujo72w06 46 12 not not RB cord-286451-ujo72w06 46 13 result result VB cord-286451-ujo72w06 46 14 in in IN cord-286451-ujo72w06 46 15 a a DT cord-286451-ujo72w06 46 16 loss loss NN cord-286451-ujo72w06 46 17 of of IN cord-286451-ujo72w06 46 18 sensitivity sensitivity NN cord-286451-ujo72w06 46 19 at at IN cord-286451-ujo72w06 46 20 the the DT cord-286451-ujo72w06 46 21 endpoint endpoint NN cord-286451-ujo72w06 46 22 of of IN cord-286451-ujo72w06 46 23 detection detection NN cord-286451-ujo72w06 46 24 . . . cord-286451-ujo72w06 47 1 The the DT cord-286451-ujo72w06 47 2 _SP cord-286451-ujo72w06 47 3 The the DT cord-286451-ujo72w06 47 4 inter inter JJ cord-286451-ujo72w06 47 5 - - JJ cord-286451-ujo72w06 47 6 assay assay JJ cord-286451-ujo72w06 47 7 and and CC cord-286451-ujo72w06 47 8 intra intra JJ cord-286451-ujo72w06 47 9 - - JJ cord-286451-ujo72w06 47 10 assay assay JJ cord-286451-ujo72w06 47 11 variability variability NN cord-286451-ujo72w06 47 12 of of IN cord-286451-ujo72w06 47 13 the the DT cord-286451-ujo72w06 47 14 multiplex multiplex NN cord-286451-ujo72w06 47 15 was be VBD cord-286451-ujo72w06 47 16 also also RB cord-286451-ujo72w06 47 17 assessed assess VBN cord-286451-ujo72w06 47 18 . . . cord-286451-ujo72w06 48 1 The the DT cord-286451-ujo72w06 48 2 inter inter JJ cord-286451-ujo72w06 48 3 - - JJ cord-286451-ujo72w06 48 4 assay assay JJ cord-286451-ujo72w06 48 5 variability variability NN cord-286451-ujo72w06 48 6 ( ( -LRB- cord-286451-ujo72w06 48 7 reproducibility reproducibility NN cord-286451-ujo72w06 48 8 or or CC cord-286451-ujo72w06 48 9 longterm longterm JJ cord-286451-ujo72w06 48 10 precision precision NN cord-286451-ujo72w06 48 11 ) ) -RRB- cord-286451-ujo72w06 48 12 was be VBD cord-286451-ujo72w06 48 13 assessed assess VBN cord-286451-ujo72w06 48 14 by by IN cord-286451-ujo72w06 48 15 monitoring monitor VBG cord-286451-ujo72w06 48 16 positive positive JJ cord-286451-ujo72w06 48 17 run run NN cord-286451-ujo72w06 48 18 controls control NNS cord-286451-ujo72w06 48 19 over over IN cord-286451-ujo72w06 48 20 20 20 CD cord-286451-ujo72w06 48 21 PCR PCR NNP cord-286451-ujo72w06 48 22 runs run NNS cord-286451-ujo72w06 48 23 . . . cord-286451-ujo72w06 49 1 This this DT cord-286451-ujo72w06 49 2 assesses assess VBZ cord-286451-ujo72w06 49 3 the the DT cord-286451-ujo72w06 49 4 whole whole JJ cord-286451-ujo72w06 49 5 testing testing NN cord-286451-ujo72w06 49 6 system system NN cord-286451-ujo72w06 49 7 by by IN cord-286451-ujo72w06 49 8 including include VBG cord-286451-ujo72w06 49 9 extraction extraction NN cord-286451-ujo72w06 49 10 and and CC cord-286451-ujo72w06 49 11 PCR PCR NNP cord-286451-ujo72w06 49 12 runs run VBZ cord-286451-ujo72w06 49 13 with with IN cord-286451-ujo72w06 49 14 different different JJ cord-286451-ujo72w06 49 15 users user NNS cord-286451-ujo72w06 49 16 . . . cord-286451-ujo72w06 50 1 The the DT cord-286451-ujo72w06 50 2 intra intra JJ cord-286451-ujo72w06 50 3 - - JJ cord-286451-ujo72w06 50 4 assay assay JJ cord-286451-ujo72w06 50 5 ( ( -LRB- cord-286451-ujo72w06 50 6 repeatability repeatability NN cord-286451-ujo72w06 50 7 or or CC cord-286451-ujo72w06 50 8 short short JJ cord-286451-ujo72w06 50 9 - - HYPH cord-286451-ujo72w06 50 10 term term NN cord-286451-ujo72w06 50 11 precision precision NN cord-286451-ujo72w06 50 12 ) ) -RRB- cord-286451-ujo72w06 50 13 variability variability NN cord-286451-ujo72w06 50 14 was be VBD cord-286451-ujo72w06 50 15 assessed assess VBN cord-286451-ujo72w06 50 16 by by IN cord-286451-ujo72w06 50 17 testing test VBG cord-286451-ujo72w06 50 18 a a DT cord-286451-ujo72w06 50 19 positive positive JJ cord-286451-ujo72w06 50 20 control control NN cord-286451-ujo72w06 50 21 in in IN cord-286451-ujo72w06 50 22 20 20 CD cord-286451-ujo72w06 50 23 wells well NNS cord-286451-ujo72w06 50 24 on on IN cord-286451-ujo72w06 50 25 one one CD cord-286451-ujo72w06 50 26 PCR PCR NNP cord-286451-ujo72w06 50 27 run run NN cord-286451-ujo72w06 50 28 . . . cord-286451-ujo72w06 51 1 All all DT cord-286451-ujo72w06 51 2 samples sample NNS cord-286451-ujo72w06 51 3 were be VBD cord-286451-ujo72w06 51 4 extracted extract VBN cord-286451-ujo72w06 51 5 either either CC cord-286451-ujo72w06 51 6 on on IN cord-286451-ujo72w06 51 7 the the DT cord-286451-ujo72w06 51 8 Qiagen Qiagen NNP cord-286451-ujo72w06 51 9 MDx MDx NNS cord-286451-ujo72w06 51 10 using use VBG cord-286451-ujo72w06 51 11 the the DT cord-286451-ujo72w06 51 12 QIAamp QIAamp NNP cord-286451-ujo72w06 51 13 viral viral JJ cord-286451-ujo72w06 51 14 RNA RNA NNP cord-286451-ujo72w06 51 15 kit kit NN cord-286451-ujo72w06 51 16 ( ( -LRB- cord-286451-ujo72w06 51 17 Qiagen Qiagen NNP cord-286451-ujo72w06 51 18 , , , cord-286451-ujo72w06 51 19 Crawley Crawley NNP cord-286451-ujo72w06 51 20 , , , cord-286451-ujo72w06 51 21 UK UK NNP cord-286451-ujo72w06 51 22 ) ) -RRB- cord-286451-ujo72w06 51 23 or or CC cord-286451-ujo72w06 51 24 the the DT cord-286451-ujo72w06 51 25 NucliSens NucliSens NNP cord-286451-ujo72w06 51 26 EasyMAG easymag POS cord-286451-ujo72w06 51 27 ( ( -LRB- cord-286451-ujo72w06 51 28 bioMérieux biomérieux XX cord-286451-ujo72w06 51 29 , , , cord-286451-ujo72w06 51 30 Hampshire Hampshire NNP cord-286451-ujo72w06 51 31 , , , cord-286451-ujo72w06 51 32 UK UK NNP cord-286451-ujo72w06 51 33 ) ) -RRB- cord-286451-ujo72w06 51 34 according accord VBG cord-286451-ujo72w06 51 35 to to IN cord-286451-ujo72w06 51 36 manufacturer manufacturer NN cord-286451-ujo72w06 51 37 instructions instruction NNS cord-286451-ujo72w06 51 38 . . . cord-286451-ujo72w06 52 1 Both both DT cord-286451-ujo72w06 52 2 extraction extraction NN cord-286451-ujo72w06 52 3 platforms platform NNS cord-286451-ujo72w06 52 4 have have VBP cord-286451-ujo72w06 52 5 comparable comparable JJ cord-286451-ujo72w06 52 6 sensitivity sensitivity NN cord-286451-ujo72w06 52 7 and and CC cord-286451-ujo72w06 52 8 are be VBP cord-286451-ujo72w06 52 9 used use VBN cord-286451-ujo72w06 52 10 interchangeably interchangeably RB cord-286451-ujo72w06 52 11 . . . cord-286451-ujo72w06 53 1 The the DT cord-286451-ujo72w06 53 2 Abbott Abbott NNP cord-286451-ujo72w06 53 3 commercial commercial JJ cord-286451-ujo72w06 53 4 CT CT NNP cord-286451-ujo72w06 53 5 / / SYM cord-286451-ujo72w06 53 6 NG NG NNP cord-286451-ujo72w06 53 7 assay assay NN cord-286451-ujo72w06 53 8 uses use VBZ cord-286451-ujo72w06 53 9 the the DT cord-286451-ujo72w06 53 10 Abbott Abbott NNP cord-286451-ujo72w06 53 11 M2000 M2000 NNP cord-286451-ujo72w06 53 12 automated automate VBN cord-286451-ujo72w06 53 13 extraction extraction NN cord-286451-ujo72w06 53 14 platform platform NN cord-286451-ujo72w06 53 15 for for IN cord-286451-ujo72w06 53 16 sample sample NN cord-286451-ujo72w06 53 17 extraction extraction NN cord-286451-ujo72w06 53 18 . . . cord-286451-ujo72w06 54 1 PCR PCR NNP cord-286451-ujo72w06 54 2 was be VBD cord-286451-ujo72w06 54 3 performed perform VBN cord-286451-ujo72w06 54 4 on on IN cord-286451-ujo72w06 54 5 6 6 CD cord-286451-ujo72w06 54 6 l l NN cord-286451-ujo72w06 54 7 of of IN cord-286451-ujo72w06 54 8 DNA dna NN cord-286451-ujo72w06 54 9 extract extract NN cord-286451-ujo72w06 54 10 with with IN cord-286451-ujo72w06 54 11 Platinum Platinum NNP cord-286451-ujo72w06 54 12 QPCR QPCR NNP cord-286451-ujo72w06 54 13 PCR PCR NNP cord-286451-ujo72w06 54 14 mastermix mastermix NN cord-286451-ujo72w06 54 15 PCR PCR NNP cord-286451-ujo72w06 54 16 kit kit NN cord-286451-ujo72w06 54 17 ( ( -LRB- cord-286451-ujo72w06 54 18 Invitrogen Invitrogen NNP cord-286451-ujo72w06 54 19 ) ) -RRB- cord-286451-ujo72w06 54 20 on on IN cord-286451-ujo72w06 54 21 an an DT cord-286451-ujo72w06 54 22 ABI ABI NNP cord-286451-ujo72w06 54 23 Prism Prism NNP cord-286451-ujo72w06 54 24 7500 7500 CD cord-286451-ujo72w06 54 25 SDS SDS NNP cord-286451-ujo72w06 54 26 realtime realtime JJ cord-286451-ujo72w06 54 27 platform platform NN cord-286451-ujo72w06 54 28 ( ( -LRB- cord-286451-ujo72w06 54 29 Applied Applied NNP cord-286451-ujo72w06 54 30 Biosystems Biosystems NNP cord-286451-ujo72w06 54 31 ) ) -RRB- cord-286451-ujo72w06 54 32 in in IN cord-286451-ujo72w06 54 33 a a DT cord-286451-ujo72w06 54 34 15 15 CD cord-286451-ujo72w06 54 35 l l NN cord-286451-ujo72w06 54 36 reaction reaction NN cord-286451-ujo72w06 54 37 volume volume NN cord-286451-ujo72w06 54 38 . . . cord-286451-ujo72w06 55 1 The the DT cord-286451-ujo72w06 55 2 following follow VBG cord-286451-ujo72w06 55 3 thermal thermal JJ cord-286451-ujo72w06 55 4 profile profile NN cord-286451-ujo72w06 55 5 was be VBD cord-286451-ujo72w06 55 6 used use VBN cord-286451-ujo72w06 55 7 : : : cord-286451-ujo72w06 55 8 2 2 CD cord-286451-ujo72w06 55 9 min min NN cord-286451-ujo72w06 55 10 at at IN cord-286451-ujo72w06 55 11 50 50 CD cord-286451-ujo72w06 55 12 • • NNS cord-286451-ujo72w06 55 13 C C NNP cord-286451-ujo72w06 55 14 , , , cord-286451-ujo72w06 55 15 2 2 CD cord-286451-ujo72w06 55 16 min min NN cord-286451-ujo72w06 55 17 at at IN cord-286451-ujo72w06 55 18 95 95 CD cord-286451-ujo72w06 55 19 • • NNS cord-286451-ujo72w06 56 1 C C NNP cord-286451-ujo72w06 56 2 for for IN cord-286451-ujo72w06 56 3 DNA dna NN cord-286451-ujo72w06 56 4 polymerase polymerase NN cord-286451-ujo72w06 56 5 activation activation NN cord-286451-ujo72w06 56 6 followed follow VBN cord-286451-ujo72w06 56 7 by by IN cord-286451-ujo72w06 56 8 40 40 CD cord-286451-ujo72w06 56 9 amplification amplification NN cord-286451-ujo72w06 56 10 cycles cycle NNS cord-286451-ujo72w06 56 11 of of IN cord-286451-ujo72w06 56 12 8 8 CD cord-286451-ujo72w06 56 13 sec sec NNS cord-286451-ujo72w06 56 14 at at IN cord-286451-ujo72w06 56 15 95 95 CD cord-286451-ujo72w06 56 16 • • NN cord-286451-ujo72w06 56 17 C c NN cord-286451-ujo72w06 56 18 and and CC cord-286451-ujo72w06 56 19 34 34 CD cord-286451-ujo72w06 56 20 sec sec NNS cord-286451-ujo72w06 56 21 at at IN cord-286451-ujo72w06 56 22 60 60 CD cord-286451-ujo72w06 57 1 • • NNP cord-286451-ujo72w06 58 1 C C NNP cord-286451-ujo72w06 58 2 each each DT cord-286451-ujo72w06 58 3 ( ( -LRB- cord-286451-ujo72w06 58 4 annealing anneal VBG cord-286451-ujo72w06 58 5 - - HYPH cord-286451-ujo72w06 58 6 extension extension NN cord-286451-ujo72w06 58 7 step step NN cord-286451-ujo72w06 58 8 ) ) -RRB- cord-286451-ujo72w06 58 9 . . . cord-286451-ujo72w06 59 1 A a DT cord-286451-ujo72w06 59 2 10-fold 10-fold JJ cord-286451-ujo72w06 59 3 dilution dilution NN cord-286451-ujo72w06 59 4 series series NN cord-286451-ujo72w06 59 5 was be VBD cord-286451-ujo72w06 59 6 assessed assess VBN cord-286451-ujo72w06 59 7 through through IN cord-286451-ujo72w06 59 8 the the DT cord-286451-ujo72w06 59 9 C. C. NNP cord-286451-ujo72w06 59 10 trachomatis trachomatis NN cord-286451-ujo72w06 59 11 assay assay NN cord-286451-ujo72w06 59 12 and and CC cord-286451-ujo72w06 59 13 the the DT cord-286451-ujo72w06 59 14 Abbott Abbott NNP cord-286451-ujo72w06 59 15 commercial commercial JJ cord-286451-ujo72w06 59 16 system system NN cord-286451-ujo72w06 59 17 ( ( -LRB- cord-286451-ujo72w06 59 18 Table Table NNP cord-286451-ujo72w06 59 19 2 2 CD cord-286451-ujo72w06 59 20 ) ) -RRB- cord-286451-ujo72w06 59 21 . . . cord-286451-ujo72w06 60 1 The the DT cord-286451-ujo72w06 60 2 results result NNS cord-286451-ujo72w06 60 3 suggest suggest VBP cord-286451-ujo72w06 60 4 that that IN cord-286451-ujo72w06 60 5 sensitivity sensitivity NN cord-286451-ujo72w06 60 6 of of IN cord-286451-ujo72w06 60 7 the the DT cord-286451-ujo72w06 60 8 C. C. NNP cord-286451-ujo72w06 60 9 trachomatis trachomatis NN cord-286451-ujo72w06 60 10 assay assay NN cord-286451-ujo72w06 60 11 is be VBZ cord-286451-ujo72w06 60 12 similar similar JJ cord-286451-ujo72w06 60 13 to to IN cord-286451-ujo72w06 60 14 the the DT cord-286451-ujo72w06 60 15 Abbott Abbott NNP cord-286451-ujo72w06 60 16 system system NN cord-286451-ujo72w06 60 17 , , , cord-286451-ujo72w06 60 18 the the DT cord-286451-ujo72w06 60 19 C. C. NNP cord-286451-ujo72w06 60 20 trachomatis trachomatis NN cord-286451-ujo72w06 60 21 assay assay NN cord-286451-ujo72w06 60 22 detected detect VBD cord-286451-ujo72w06 60 23 down down RP cord-286451-ujo72w06 60 24 to to IN cord-286451-ujo72w06 60 25 the the DT cord-286451-ujo72w06 60 26 −3 −3 NNP cord-286451-ujo72w06 60 27 dilution dilution NN cord-286451-ujo72w06 60 28 , , , cord-286451-ujo72w06 60 29 whereas whereas IN cord-286451-ujo72w06 60 30 the the DT cord-286451-ujo72w06 60 31 Abbott Abbott NNP cord-286451-ujo72w06 60 32 system system NN cord-286451-ujo72w06 60 33 detected detect VBD cord-286451-ujo72w06 60 34 the the DT cord-286451-ujo72w06 60 35 −4 −4 CD cord-286451-ujo72w06 60 36 dilution dilution NN cord-286451-ujo72w06 60 37 , , , cord-286451-ujo72w06 60 38 however however RB cord-286451-ujo72w06 60 39 this this DT cord-286451-ujo72w06 60 40 was be VBD cord-286451-ujo72w06 60 41 detected detect VBN cord-286451-ujo72w06 60 42 as as IN cord-286451-ujo72w06 60 43 " " `` cord-286451-ujo72w06 60 44 beyond beyond IN cord-286451-ujo72w06 60 45 the the DT cord-286451-ujo72w06 60 46 cut cut VB cord-286451-ujo72w06 60 47 - - HYPH cord-286451-ujo72w06 60 48 off off NN cord-286451-ujo72w06 60 49 " " '' cord-286451-ujo72w06 60 50 without without IN cord-286451-ujo72w06 60 51 a a DT cord-286451-ujo72w06 60 52 Ct Ct NNP cord-286451-ujo72w06 60 53 value value NN cord-286451-ujo72w06 60 54 . . . cord-286451-ujo72w06 61 1 When when WRB cord-286451-ujo72w06 61 2 a a DT cord-286451-ujo72w06 61 3 sample sample NN cord-286451-ujo72w06 61 4 is be VBZ cord-286451-ujo72w06 61 5 detected detect VBN cord-286451-ujo72w06 61 6 as as IN cord-286451-ujo72w06 61 7 " " `` cord-286451-ujo72w06 61 8 beyond beyond IN cord-286451-ujo72w06 61 9 the the DT cord-286451-ujo72w06 61 10 cut cut VB cord-286451-ujo72w06 61 11 - - HYPH cord-286451-ujo72w06 61 12 off off RP cord-286451-ujo72w06 61 13 " " '' cord-286451-ujo72w06 61 14 the the DT cord-286451-ujo72w06 61 15 sample sample NN cord-286451-ujo72w06 61 16 is be VBZ cord-286451-ujo72w06 61 17 repeated repeat VBN cord-286451-ujo72w06 61 18 through through IN cord-286451-ujo72w06 61 19 the the DT cord-286451-ujo72w06 61 20 system system NN cord-286451-ujo72w06 61 21 ( ( -LRB- cord-286451-ujo72w06 61 22 extraction extraction NN cord-286451-ujo72w06 61 23 and and CC cord-286451-ujo72w06 61 24 PCR PCR NNP cord-286451-ujo72w06 61 25 ) ) -RRB- cord-286451-ujo72w06 61 26 . . . cord-286451-ujo72w06 62 1 If if IN cord-286451-ujo72w06 62 2 the the DT cord-286451-ujo72w06 62 3 sample sample NN cord-286451-ujo72w06 62 4 is be VBZ cord-286451-ujo72w06 62 5 determined determine VBN cord-286451-ujo72w06 62 6 " " `` cord-286451-ujo72w06 62 7 beyond beyond IN cord-286451-ujo72w06 62 8 cut cut VB cord-286451-ujo72w06 62 9 - - HYPH cord-286451-ujo72w06 62 10 off off RP cord-286451-ujo72w06 62 11 " " '' cord-286451-ujo72w06 62 12 on on IN cord-286451-ujo72w06 62 13 repeat repeat NN cord-286451-ujo72w06 62 14 , , , cord-286451-ujo72w06 62 15 the the DT cord-286451-ujo72w06 62 16 sample sample NN cord-286451-ujo72w06 62 17 is be VBZ cord-286451-ujo72w06 62 18 reported report VBN cord-286451-ujo72w06 62 19 as as IN cord-286451-ujo72w06 62 20 positive positive JJ cord-286451-ujo72w06 62 21 . . . cord-286451-ujo72w06 63 1 The the DT cord-286451-ujo72w06 63 2 Abbott Abbott NNP cord-286451-ujo72w06 63 3 system system NN cord-286451-ujo72w06 63 4 detected detect VBD cord-286451-ujo72w06 63 5 the the DT cord-286451-ujo72w06 63 6 −4 −4 CD cord-286451-ujo72w06 63 7 dilution dilution NN cord-286451-ujo72w06 63 8 as as IN cord-286451-ujo72w06 63 9 " " `` cord-286451-ujo72w06 63 10 beyond beyond IN cord-286451-ujo72w06 63 11 cut cut VB cord-286451-ujo72w06 63 12 - - HYPH cord-286451-ujo72w06 63 13 off off RP cord-286451-ujo72w06 63 14 " " '' cord-286451-ujo72w06 63 15 on on IN cord-286451-ujo72w06 63 16 repeat repeat NN cord-286451-ujo72w06 63 17 , , , cord-286451-ujo72w06 63 18 therefore therefore RB cord-286451-ujo72w06 63 19 these these DT cord-286451-ujo72w06 63 20 results result NNS cord-286451-ujo72w06 63 21 suggest suggest VBP cord-286451-ujo72w06 63 22 that that IN cord-286451-ujo72w06 63 23 the the DT cord-286451-ujo72w06 63 24 Abbott Abbott NNP cord-286451-ujo72w06 63 25 system system NN cord-286451-ujo72w06 63 26 may may MD cord-286451-ujo72w06 63 27 be be VB cord-286451-ujo72w06 63 28 slightly slightly RB cord-286451-ujo72w06 63 29 more more RBR cord-286451-ujo72w06 63 30 sensitive sensitive JJ cord-286451-ujo72w06 63 31 at at IN cord-286451-ujo72w06 63 32 the the DT cord-286451-ujo72w06 63 33 endpoint endpoint NN cord-286451-ujo72w06 63 34 of of IN cord-286451-ujo72w06 63 35 detection detection NN cord-286451-ujo72w06 63 36 . . . cord-286451-ujo72w06 64 1 The the DT cord-286451-ujo72w06 64 2 C. C. NNP cord-286451-ujo72w06 64 3 trachomatis trachomatis NN cord-286451-ujo72w06 64 4 assay assay NN cord-286451-ujo72w06 64 5 was be VBD cord-286451-ujo72w06 64 6 assessed assess VBN cord-286451-ujo72w06 64 7 using use VBG cord-286451-ujo72w06 64 8 the the DT cord-286451-ujo72w06 64 9 QCMD QCMD NNP cord-286451-ujo72w06 64 10 C C NNP cord-286451-ujo72w06 64 11 tracho- tracho- XX cord-286451-ujo72w06 64 12 _SP cord-286451-ujo72w06 65 1 The the DT cord-286451-ujo72w06 65 2 assay assay NN cord-286451-ujo72w06 65 3 was be VBD cord-286451-ujo72w06 65 4 also also RB cord-286451-ujo72w06 65 5 evaluated evaluate VBN cord-286451-ujo72w06 65 6 using use VBG cord-286451-ujo72w06 65 7 a a DT cord-286451-ujo72w06 65 8 panel panel NN cord-286451-ujo72w06 65 9 of of IN cord-286451-ujo72w06 65 10 SDA SDA NNP cord-286451-ujo72w06 65 11 positive positive JJ cord-286451-ujo72w06 65 12 clinical clinical JJ cord-286451-ujo72w06 65 13 samples sample NNS cord-286451-ujo72w06 65 14 ; ; : cord-286451-ujo72w06 65 15 the the DT cord-286451-ujo72w06 65 16 assay assay NN cord-286451-ujo72w06 65 17 detected detect VBD cord-286451-ujo72w06 65 18 all all DT cord-286451-ujo72w06 65 19 182 182 CD cord-286451-ujo72w06 65 20 SDA SDA NNP cord-286451-ujo72w06 65 21 positive positive JJ cord-286451-ujo72w06 65 22 samples sample NNS cord-286451-ujo72w06 65 23 as as IN cord-286451-ujo72w06 65 24 positive positive JJ cord-286451-ujo72w06 65 25 . . . cord-286451-ujo72w06 65 26 _SP cord-286451-ujo72w06 66 1 3.2.1 3.2.1 CD cord-286451-ujo72w06 66 2 . . . cord-286451-ujo72w06 67 1 Endpoint endpoint NN cord-286451-ujo72w06 67 2 sensitivity sensitivity NN cord-286451-ujo72w06 67 3 Comparing compare VBG cord-286451-ujo72w06 67 4 the the DT cord-286451-ujo72w06 67 5 endpoint endpoint NN cord-286451-ujo72w06 67 6 detection detection NN cord-286451-ujo72w06 67 7 limit limit NN cord-286451-ujo72w06 67 8 of of IN cord-286451-ujo72w06 67 9 each each DT cord-286451-ujo72w06 67 10 component component NN cord-286451-ujo72w06 67 11 of of IN cord-286451-ujo72w06 67 12 the the DT cord-286451-ujo72w06 67 13 multiplex multiplex JJ cord-286451-ujo72w06 67 14 assay assay NN cord-286451-ujo72w06 67 15 to to IN cord-286451-ujo72w06 67 16 the the DT cord-286451-ujo72w06 67 17 single single JJ cord-286451-ujo72w06 67 18 assays assay NNS cord-286451-ujo72w06 67 19 showed show VBD cord-286451-ujo72w06 67 20 that that IN cord-286451-ujo72w06 67 21 multiplexing multiplexe VBG cord-286451-ujo72w06 67 22 had have VBD cord-286451-ujo72w06 67 23 no no DT cord-286451-ujo72w06 67 24 detrimental detrimental JJ cord-286451-ujo72w06 67 25 effect effect NN cord-286451-ujo72w06 67 26 on on IN cord-286451-ujo72w06 67 27 the the DT cord-286451-ujo72w06 67 28 endpoint endpoint NN cord-286451-ujo72w06 67 29 detection detection NN cord-286451-ujo72w06 67 30 limit limit NN cord-286451-ujo72w06 67 31 of of IN cord-286451-ujo72w06 67 32 each each DT cord-286451-ujo72w06 67 33 component component NN cord-286451-ujo72w06 67 34 ( ( -LRB- cord-286451-ujo72w06 67 35 Table Table NNP cord-286451-ujo72w06 67 36 3 3 CD cord-286451-ujo72w06 67 37 ) ) -RRB- cord-286451-ujo72w06 67 38 . . . cord-286451-ujo72w06 68 1 The the DT cord-286451-ujo72w06 68 2 adenovirus adenovirus NN cord-286451-ujo72w06 68 3 single single JJ cord-286451-ujo72w06 68 4 assay assay NN cord-286451-ujo72w06 68 5 detected detect VBD cord-286451-ujo72w06 68 6 the the DT cord-286451-ujo72w06 68 7 10 10 CD cord-286451-ujo72w06 68 8 −6 −6 NN cord-286451-ujo72w06 68 9 dilution dilution NN cord-286451-ujo72w06 68 10 in in IN cord-286451-ujo72w06 68 11 1 1 CD cord-286451-ujo72w06 68 12 out out IN cord-286451-ujo72w06 68 13 of of IN cord-286451-ujo72w06 68 14 2 2 CD cord-286451-ujo72w06 68 15 occasions occasion NNS cord-286451-ujo72w06 68 16 , , , cord-286451-ujo72w06 68 17 the the DT cord-286451-ujo72w06 68 18 multiplex multiplex NN cord-286451-ujo72w06 68 19 detected detect VBD cord-286451-ujo72w06 68 20 down down RP cord-286451-ujo72w06 68 21 to to IN cord-286451-ujo72w06 68 22 the the DT cord-286451-ujo72w06 68 23 10 10 CD cord-286451-ujo72w06 68 24 −5 −5 NN cord-286451-ujo72w06 68 25 dilution dilution NN cord-286451-ujo72w06 68 26 . . . cord-286451-ujo72w06 69 1 When when WRB cord-286451-ujo72w06 69 2 testing test VBG cord-286451-ujo72w06 69 3 the the DT cord-286451-ujo72w06 69 4 dilution dilution NN cord-286451-ujo72w06 69 5 series series NN cord-286451-ujo72w06 69 6 of of IN cord-286451-ujo72w06 69 7 HSV-1 HSV-1 NNP cord-286451-ujo72w06 69 8 , , , cord-286451-ujo72w06 69 9 the the DT cord-286451-ujo72w06 69 10 HSV-1 HSV-1 NNP cord-286451-ujo72w06 69 11 single single JJ cord-286451-ujo72w06 69 12 assay assay NN cord-286451-ujo72w06 69 13 detected detect VBD cord-286451-ujo72w06 69 14 the the DT cord-286451-ujo72w06 69 15 10 10 CD cord-286451-ujo72w06 69 16 −5 −5 NN cord-286451-ujo72w06 69 17 dilution dilution NN cord-286451-ujo72w06 69 18 ; ; : cord-286451-ujo72w06 69 19 the the DT cord-286451-ujo72w06 69 20 multiplex multiplex JJ cord-286451-ujo72w06 69 21 assay assay NN cord-286451-ujo72w06 69 22 detected detect VBD cord-286451-ujo72w06 69 23 the the DT cord-286451-ujo72w06 69 24 10 10 CD cord-286451-ujo72w06 69 25 −5 −5 NN cord-286451-ujo72w06 69 26 dilution dilution NN cord-286451-ujo72w06 69 27 in in IN cord-286451-ujo72w06 69 28 1 1 CD cord-286451-ujo72w06 69 29 out out IN cord-286451-ujo72w06 69 30 of of IN cord-286451-ujo72w06 69 31 2 2 CD cord-286451-ujo72w06 69 32 occasions occasion NNS cord-286451-ujo72w06 69 33 . . . cord-286451-ujo72w06 70 1 The the DT cord-286451-ujo72w06 70 2 HSV-2 HSV-2 NNPS cord-286451-ujo72w06 70 3 single single JJ cord-286451-ujo72w06 70 4 assay assay NN cord-286451-ujo72w06 70 5 and and CC cord-286451-ujo72w06 70 6 multiplex multiplex NN cord-286451-ujo72w06 70 7 detected detect VBD cord-286451-ujo72w06 70 8 the the DT cord-286451-ujo72w06 70 9 10 10 CD cord-286451-ujo72w06 70 10 −6 −6 NN cord-286451-ujo72w06 70 11 dilution dilution NN cord-286451-ujo72w06 70 12 in in IN cord-286451-ujo72w06 70 13 1 1 CD cord-286451-ujo72w06 70 14 out out IN cord-286451-ujo72w06 70 15 of of IN cord-286451-ujo72w06 70 16 2 2 CD cord-286451-ujo72w06 70 17 occasions occasion NNS cord-286451-ujo72w06 70 18 . . . cord-286451-ujo72w06 71 1 When when WRB cord-286451-ujo72w06 71 2 testing test VBG cord-286451-ujo72w06 71 3 the the DT cord-286451-ujo72w06 71 4 dilution dilution NN cord-286451-ujo72w06 71 5 series series NN cord-286451-ujo72w06 71 6 of of IN cord-286451-ujo72w06 71 7 VZV VZV NNP cord-286451-ujo72w06 71 8 , , , cord-286451-ujo72w06 71 9 the the DT cord-286451-ujo72w06 71 10 single single JJ cord-286451-ujo72w06 71 11 VZV VZV NNP cord-286451-ujo72w06 71 12 assay assay NN cord-286451-ujo72w06 71 13 detected detect VBD cord-286451-ujo72w06 71 14 the the DT cord-286451-ujo72w06 71 15 10 10 CD cord-286451-ujo72w06 71 16 −6 −6 NN cord-286451-ujo72w06 71 17 dilution dilution NN cord-286451-ujo72w06 71 18 in in IN cord-286451-ujo72w06 71 19 1 1 CD cord-286451-ujo72w06 71 20 out out IN cord-286451-ujo72w06 71 21 of of IN cord-286451-ujo72w06 71 22 2 2 CD cord-286451-ujo72w06 71 23 occasions occasion NNS cord-286451-ujo72w06 71 24 ; ; : cord-286451-ujo72w06 71 25 the the DT cord-286451-ujo72w06 71 26 multiplex multiplex NN cord-286451-ujo72w06 71 27 detected detect VBD cord-286451-ujo72w06 71 28 the the DT cord-286451-ujo72w06 71 29 10 10 CD cord-286451-ujo72w06 71 30 −5 −5 NN cord-286451-ujo72w06 71 31 dilution dilution NN cord-286451-ujo72w06 71 32 . . . cord-286451-ujo72w06 72 1 The the DT cord-286451-ujo72w06 72 2 C. C. NNP cord-286451-ujo72w06 72 3 trachomatis trachomatis NN cord-286451-ujo72w06 72 4 assay assay NN cord-286451-ujo72w06 72 5 detected detect VBD cord-286451-ujo72w06 72 6 10 10 CD cord-286451-ujo72w06 72 7 −5 −5 NN cord-286451-ujo72w06 72 8 ; ; : cord-286451-ujo72w06 72 9 the the DT cord-286451-ujo72w06 72 10 multiplex multiplex JJ cord-286451-ujo72w06 72 11 assay assay NN cord-286451-ujo72w06 72 12 detected detect VBD cord-286451-ujo72w06 72 13 10 10 CD cord-286451-ujo72w06 72 14 −5 −5 NNS cord-286451-ujo72w06 72 15 in in IN cord-286451-ujo72w06 72 16 1 1 CD cord-286451-ujo72w06 72 17 out out IN cord-286451-ujo72w06 72 18 of of IN cord-286451-ujo72w06 72 19 2 2 CD cord-286451-ujo72w06 72 20 occasions occasion NNS cord-286451-ujo72w06 72 21 . . . cord-286451-ujo72w06 73 1 The the DT cord-286451-ujo72w06 73 2 specificity specificity NN cord-286451-ujo72w06 73 3 of of IN cord-286451-ujo72w06 73 4 the the DT cord-286451-ujo72w06 73 5 assay assay NN cord-286451-ujo72w06 73 6 was be VBD cord-286451-ujo72w06 73 7 confirmed confirm VBN cord-286451-ujo72w06 73 8 by by IN cord-286451-ujo72w06 73 9 testing test VBG cord-286451-ujo72w06 73 10 a a DT cord-286451-ujo72w06 73 11 panel panel NN cord-286451-ujo72w06 73 12 of of IN cord-286451-ujo72w06 73 13 other other JJ cord-286451-ujo72w06 73 14 commonly commonly RB cord-286451-ujo72w06 73 15 encounter encounter VBP cord-286451-ujo72w06 73 16 pathogens pathogen NNS cord-286451-ujo72w06 73 17 and and CC cord-286451-ujo72w06 73 18 no no DT cord-286451-ujo72w06 73 19 false false JJ cord-286451-ujo72w06 73 20 positive positive JJ cord-286451-ujo72w06 73 21 results result NNS cord-286451-ujo72w06 73 22 were be VBD cord-286451-ujo72w06 73 23 encountered encounter VBN cord-286451-ujo72w06 73 24 . . . cord-286451-ujo72w06 74 1 The the DT cord-286451-ujo72w06 74 2 inter inter JJ cord-286451-ujo72w06 74 3 - - JJ cord-286451-ujo72w06 74 4 assay assay JJ cord-286451-ujo72w06 74 5 variability variability NN cord-286451-ujo72w06 74 6 was be VBD cord-286451-ujo72w06 74 7 assessed assess VBN cord-286451-ujo72w06 74 8 by by IN cord-286451-ujo72w06 74 9 monitoring monitor VBG cord-286451-ujo72w06 74 10 positive positive JJ cord-286451-ujo72w06 74 11 run run NN cord-286451-ujo72w06 74 12 controls control NNS cord-286451-ujo72w06 74 13 over over IN cord-286451-ujo72w06 74 14 20 20 CD cord-286451-ujo72w06 74 15 PCR PCR NNP cord-286451-ujo72w06 74 16 runs run NNS cord-286451-ujo72w06 74 17 ( ( -LRB- cord-286451-ujo72w06 74 18 Table table NN cord-286451-ujo72w06 74 19 4a 4a CD cord-286451-ujo72w06 74 20 ) ) -RRB- cord-286451-ujo72w06 74 21 , , , cord-286451-ujo72w06 74 22 and and CC cord-286451-ujo72w06 74 23 intra intra JJ cord-286451-ujo72w06 74 24 - - JJ cord-286451-ujo72w06 74 25 assay assay JJ cord-286451-ujo72w06 74 26 variability variability NN cord-286451-ujo72w06 74 27 by by IN cord-286451-ujo72w06 74 28 testing test VBG cord-286451-ujo72w06 74 29 a a DT cord-286451-ujo72w06 74 30 positive positive JJ cord-286451-ujo72w06 74 31 control control NN cord-286451-ujo72w06 74 32 in in IN cord-286451-ujo72w06 74 33 20 20 CD cord-286451-ujo72w06 74 34 wells well NNS cord-286451-ujo72w06 74 35 on on IN cord-286451-ujo72w06 74 36 one one CD cord-286451-ujo72w06 74 37 PCR PCR NNP cord-286451-ujo72w06 74 38 run run NN cord-286451-ujo72w06 74 39 ( ( -LRB- cord-286451-ujo72w06 74 40 Table table NN cord-286451-ujo72w06 74 41 4b 4b CD cord-286451-ujo72w06 74 42 ) ) -RRB- cord-286451-ujo72w06 74 43 . . . cord-286451-ujo72w06 75 1 The the DT cord-286451-ujo72w06 75 2 results result NNS cord-286451-ujo72w06 75 3 suggest suggest VBP cord-286451-ujo72w06 75 4 that that IN cord-286451-ujo72w06 75 5 there there EX cord-286451-ujo72w06 75 6 is be VBZ cord-286451-ujo72w06 75 7 little little JJ cord-286451-ujo72w06 75 8 inter inter JJ cord-286451-ujo72w06 75 9 - - JJ cord-286451-ujo72w06 75 10 assay assay JJ cord-286451-ujo72w06 75 11 variability variability NN cord-286451-ujo72w06 75 12 as as IN cord-286451-ujo72w06 75 13 the the DT cord-286451-ujo72w06 75 14 Ct Ct NNP cord-286451-ujo72w06 75 15 of of IN cord-286451-ujo72w06 75 16 each each DT cord-286451-ujo72w06 75 17 component component NN cord-286451-ujo72w06 75 18 was be VBD cord-286451-ujo72w06 75 19 similar similar JJ cord-286451-ujo72w06 75 20 over over IN cord-286451-ujo72w06 75 21 20 20 CD cord-286451-ujo72w06 75 22 different different JJ cord-286451-ujo72w06 75 23 runs run NNS cord-286451-ujo72w06 75 24 with with IN cord-286451-ujo72w06 75 25 low low JJ cord-286451-ujo72w06 75 26 standard standard JJ cord-286451-ujo72w06 75 27 deviation deviation NN cord-286451-ujo72w06 75 28 values value NNS cord-286451-ujo72w06 75 29 and and CC cord-286451-ujo72w06 75 30 low low JJ cord-286451-ujo72w06 75 31 co co JJ cord-286451-ujo72w06 75 32 - - JJ cord-286451-ujo72w06 75 33 efficient efficient JJ cord-286451-ujo72w06 75 34 of of IN cord-286451-ujo72w06 75 35 variation variation NN cord-286451-ujo72w06 75 36 ( ( -LRB- cord-286451-ujo72w06 75 37 C c NN cord-286451-ujo72w06 75 38 V v NN cord-286451-ujo72w06 75 39 ) ) -RRB- cord-286451-ujo72w06 75 40 values value NNS cord-286451-ujo72w06 75 41 . . . cord-286451-ujo72w06 76 1 The the DT cord-286451-ujo72w06 76 2 results result NNS cord-286451-ujo72w06 76 3 also also RB cord-286451-ujo72w06 76 4 suggest suggest VBP cord-286451-ujo72w06 76 5 that that IN cord-286451-ujo72w06 76 6 the the DT cord-286451-ujo72w06 76 7 intra intra JJ cord-286451-ujo72w06 76 8 - - JJ cord-286451-ujo72w06 76 9 assay assay JJ cord-286451-ujo72w06 76 10 variability variability NN cord-286451-ujo72w06 76 11 of of IN cord-286451-ujo72w06 76 12 the the DT cord-286451-ujo72w06 76 13 assay assay NN cord-286451-ujo72w06 76 14 is be VBZ cord-286451-ujo72w06 76 15 also also RB cord-286451-ujo72w06 76 16 good good JJ cord-286451-ujo72w06 76 17 for for IN cord-286451-ujo72w06 76 18 each each DT cord-286451-ujo72w06 76 19 component component NN cord-286451-ujo72w06 76 20 as as IN cord-286451-ujo72w06 76 21 little little JJ cord-286451-ujo72w06 76 22 variation variation NN cord-286451-ujo72w06 76 23 was be VBD cord-286451-ujo72w06 76 24 observed observe VBN cord-286451-ujo72w06 76 25 when when WRB cord-286451-ujo72w06 76 26 the the DT cord-286451-ujo72w06 76 27 positive positive JJ cord-286451-ujo72w06 76 28 control control NN cord-286451-ujo72w06 76 29 was be VBD cord-286451-ujo72w06 76 30 repeatedly repeatedly RB cord-286451-ujo72w06 76 31 tested test VBN cord-286451-ujo72w06 76 32 and and CC cord-286451-ujo72w06 76 33 low low JJ cord-286451-ujo72w06 76 34 ( ( -LRB- cord-286451-ujo72w06 76 35 C c NN cord-286451-ujo72w06 76 36 V v NN cord-286451-ujo72w06 76 37 ) ) -RRB- cord-286451-ujo72w06 76 38 values value NNS cord-286451-ujo72w06 76 39 . . . cord-286451-ujo72w06 77 1 Overall overall RB cord-286451-ujo72w06 77 2 these these DT cord-286451-ujo72w06 77 3 results result NNS cord-286451-ujo72w06 77 4 suggest suggest VBP cord-286451-ujo72w06 77 5 that that IN cord-286451-ujo72w06 77 6 the the DT cord-286451-ujo72w06 77 7 duplex duplex NN cord-286451-ujo72w06 77 8 assay assay NN cord-286451-ujo72w06 77 9 is be VBZ cord-286451-ujo72w06 77 10 precise precise JJ cord-286451-ujo72w06 77 11 and and CC cord-286451-ujo72w06 77 12 robust robust JJ cord-286451-ujo72w06 77 13 . . . cord-286451-ujo72w06 78 1 This this DT cord-286451-ujo72w06 78 2 paper paper NN cord-286451-ujo72w06 78 3 describes describe VBZ cord-286451-ujo72w06 78 4 the the DT cord-286451-ujo72w06 78 5 development development NN cord-286451-ujo72w06 78 6 and and CC cord-286451-ujo72w06 78 7 validation validation NN cord-286451-ujo72w06 78 8 of of IN cord-286451-ujo72w06 78 9 a a DT cord-286451-ujo72w06 78 10 multiplex multiplex JJ cord-286451-ujo72w06 78 11 real real JJ cord-286451-ujo72w06 78 12 - - HYPH cord-286451-ujo72w06 78 13 time time NN cord-286451-ujo72w06 78 14 PCR PCR NNP cord-286451-ujo72w06 78 15 assay assay NN cord-286451-ujo72w06 78 16 , , , cord-286451-ujo72w06 78 17 which which WDT cord-286451-ujo72w06 78 18 will will MD cord-286451-ujo72w06 78 19 allow allow VB cord-286451-ujo72w06 78 20 rapid rapid JJ cord-286451-ujo72w06 78 21 and and CC cord-286451-ujo72w06 78 22 simultaneous simultaneous JJ cord-286451-ujo72w06 78 23 detection detection NN cord-286451-ujo72w06 78 24 of of IN cord-286451-ujo72w06 78 25 HSV1/2 HSV1/2 NNP cord-286451-ujo72w06 78 26 , , , cord-286451-ujo72w06 78 27 VZV VZV NNP cord-286451-ujo72w06 78 28 , , , cord-286451-ujo72w06 78 29 adenovirus adenovirus NN cord-286451-ujo72w06 78 30 and and CC cord-286451-ujo72w06 78 31 C. C. NNP cord-286451-ujo72w06 78 32 trachomatis trachomatis NN cord-286451-ujo72w06 78 33 on on IN cord-286451-ujo72w06 78 34 eye eye NN cord-286451-ujo72w06 78 35 swabs swab NNS cord-286451-ujo72w06 78 36 . . . cord-286451-ujo72w06 79 1 The the DT cord-286451-ujo72w06 79 2 validation validation NN cord-286451-ujo72w06 79 3 showed show VBD cord-286451-ujo72w06 79 4 that that IN cord-286451-ujo72w06 79 5 the the DT cord-286451-ujo72w06 79 6 newly newly RB cord-286451-ujo72w06 79 7 designed design VBN cord-286451-ujo72w06 79 8 C. C. NNP cord-286451-ujo72w06 79 9 trachomatis trachomatis NN cord-286451-ujo72w06 79 10 assay assay NN cord-286451-ujo72w06 79 11 was be VBD cord-286451-ujo72w06 79 12 sensitive sensitive JJ cord-286451-ujo72w06 79 13 and and CC cord-286451-ujo72w06 79 14 specific specific JJ cord-286451-ujo72w06 79 15 . . . cord-286451-ujo72w06 80 1 When when WRB cord-286451-ujo72w06 80 2 compared compare VBN cord-286451-ujo72w06 80 3 to to IN cord-286451-ujo72w06 80 4 the the DT cord-286451-ujo72w06 80 5 Abbott Abbott NNP cord-286451-ujo72w06 80 6 system system NN cord-286451-ujo72w06 80 7 the the DT cord-286451-ujo72w06 80 8 in in IN cord-286451-ujo72w06 80 9 house house NN cord-286451-ujo72w06 80 10 may may MD cord-286451-ujo72w06 80 11 be be VB cord-286451-ujo72w06 80 12 slightly slightly RB cord-286451-ujo72w06 80 13 less less RBR cord-286451-ujo72w06 80 14 sensitive sensitive JJ cord-286451-ujo72w06 80 15 at at IN cord-286451-ujo72w06 80 16 the the DT cord-286451-ujo72w06 80 17 endpoint endpoint NN cord-286451-ujo72w06 80 18 of of IN cord-286451-ujo72w06 80 19 detection detection NN cord-286451-ujo72w06 80 20 . . . cord-286451-ujo72w06 81 1 The the DT cord-286451-ujo72w06 81 2 in in IN cord-286451-ujo72w06 81 3 - - HYPH cord-286451-ujo72w06 81 4 house house NN cord-286451-ujo72w06 81 5 assay assay NN cord-286451-ujo72w06 81 6 therefore therefore RB cord-286451-ujo72w06 81 7 may may MD cord-286451-ujo72w06 81 8 occasionally occasionally RB cord-286451-ujo72w06 81 9 miss miss VB cord-286451-ujo72w06 81 10 very very RB cord-286451-ujo72w06 81 11 weak weak JJ cord-286451-ujo72w06 81 12 positive positive JJ cord-286451-ujo72w06 81 13 C. C. NNP cord-286451-ujo72w06 81 14 trachomatis trachomatis NN cord-286451-ujo72w06 81 15 samples sample NNS cord-286451-ujo72w06 81 16 . . . cord-286451-ujo72w06 82 1 Multiplexing multiplexe VBG cord-286451-ujo72w06 82 2 the the DT cord-286451-ujo72w06 82 3 five five CD cord-286451-ujo72w06 82 4 assays assay NNS cord-286451-ujo72w06 82 5 had have VBD cord-286451-ujo72w06 82 6 no no DT cord-286451-ujo72w06 82 7 effect effect NN cord-286451-ujo72w06 82 8 on on IN cord-286451-ujo72w06 82 9 the the DT cord-286451-ujo72w06 82 10 performance performance NN cord-286451-ujo72w06 82 11 of of IN cord-286451-ujo72w06 82 12 any any DT cord-286451-ujo72w06 82 13 of of IN cord-286451-ujo72w06 82 14 the the DT cord-286451-ujo72w06 82 15 individual individual JJ cord-286451-ujo72w06 82 16 components component NNS cord-286451-ujo72w06 82 17 by by IN cord-286451-ujo72w06 82 18 assessment assessment NN cord-286451-ujo72w06 82 19 of of IN cord-286451-ujo72w06 82 20 dilution dilution NN cord-286451-ujo72w06 82 21 panels panel NNS cord-286451-ujo72w06 82 22 . . . cord-286451-ujo72w06 83 1 The the DT cord-286451-ujo72w06 83 2 multiplex multiplex JJ cord-286451-ujo72w06 83 3 assay assay NN cord-286451-ujo72w06 83 4 was be VBD cord-286451-ujo72w06 83 5 shown show VBN cord-286451-ujo72w06 83 6 to to TO cord-286451-ujo72w06 83 7 be be VB cord-286451-ujo72w06 83 8 specific specific JJ cord-286451-ujo72w06 83 9 by by IN cord-286451-ujo72w06 83 10 assessment assessment NN cord-286451-ujo72w06 83 11 of of IN cord-286451-ujo72w06 83 12 quality quality NN cord-286451-ujo72w06 83 13 control control NN cord-286451-ujo72w06 83 14 panels panel NNS cord-286451-ujo72w06 83 15 and and CC cord-286451-ujo72w06 83 16 a a DT cord-286451-ujo72w06 83 17 panel panel NN cord-286451-ujo72w06 83 18 of of IN cord-286451-ujo72w06 83 19 commonly commonly RB cord-286451-ujo72w06 83 20 encountered encounter VBN cord-286451-ujo72w06 83 21 pathogens pathogen NNS cord-286451-ujo72w06 83 22 . . . cord-286451-ujo72w06 84 1 The the DT cord-286451-ujo72w06 84 2 multiplex multiplex JJ cord-286451-ujo72w06 84 3 assay assay NN cord-286451-ujo72w06 84 4 was be VBD cord-286451-ujo72w06 84 5 also also RB cord-286451-ujo72w06 84 6 shown show VBN cord-286451-ujo72w06 84 7 to to TO cord-286451-ujo72w06 84 8 be be VB cord-286451-ujo72w06 84 9 precise precise JJ cord-286451-ujo72w06 84 10 and and CC cord-286451-ujo72w06 84 11 robust robust JJ cord-286451-ujo72w06 84 12 by by IN cord-286451-ujo72w06 84 13 assessment assessment NN cord-286451-ujo72w06 84 14 of of IN cord-286451-ujo72w06 84 15 the the DT cord-286451-ujo72w06 84 16 inter inter JJ cord-286451-ujo72w06 84 17 - - NN cord-286451-ujo72w06 84 18 assay assay JJ cord-286451-ujo72w06 84 19 and and CC cord-286451-ujo72w06 84 20 intra intra JJ cord-286451-ujo72w06 84 21 - - JJ cord-286451-ujo72w06 84 22 assay assay JJ cord-286451-ujo72w06 84 23 variability variability NN cord-286451-ujo72w06 84 24 . . . cord-286451-ujo72w06 85 1 Multiplexing multiplexe VBG cord-286451-ujo72w06 85 2 by by IN cord-286451-ujo72w06 85 3 sample sample NN cord-286451-ujo72w06 85 4 type type NN cord-286451-ujo72w06 85 5 / / SYM cord-286451-ujo72w06 85 6 disease disease NN cord-286451-ujo72w06 85 7 syndrome syndrome NN cord-286451-ujo72w06 85 8 simplifies simplify VBZ cord-286451-ujo72w06 85 9 the the DT cord-286451-ujo72w06 85 10 routine routine JJ cord-286451-ujo72w06 85 11 service service NN cord-286451-ujo72w06 85 12 ; ; : cord-286451-ujo72w06 85 13 overall overall JJ cord-286451-ujo72w06 85 14 costs cost NNS cord-286451-ujo72w06 85 15 are be VBP cord-286451-ujo72w06 85 16 reduced reduce VBN cord-286451-ujo72w06 85 17 when when WRB cord-286451-ujo72w06 85 18 compared compare VBN cord-286451-ujo72w06 85 19 to to IN cord-286451-ujo72w06 85 20 single single JJ cord-286451-ujo72w06 85 21 testing testing NN cord-286451-ujo72w06 85 22 as as IN cord-286451-ujo72w06 85 23 rapid rapid JJ cord-286451-ujo72w06 85 24 diagnosis diagnosis NN cord-286451-ujo72w06 85 25 can can MD cord-286451-ujo72w06 85 26 reduce reduce VB cord-286451-ujo72w06 85 27 unnecessary unnecessary JJ cord-286451-ujo72w06 85 28 antibiotic antibiotic JJ cord-286451-ujo72w06 85 29 usage usage NN cord-286451-ujo72w06 85 30 and and CC cord-286451-ujo72w06 85 31 investigations investigation NNS cord-286451-ujo72w06 85 32 . . . cord-286451-ujo72w06 86 1 Reductions reduction NNS cord-286451-ujo72w06 86 2 in in IN cord-286451-ujo72w06 86 3 sample sample NN cord-286451-ujo72w06 86 4 turn turn NN cord-286451-ujo72w06 86 5 around around RP cord-286451-ujo72w06 86 6 times time NNS cord-286451-ujo72w06 86 7 have have VBP cord-286451-ujo72w06 86 8 been be VBN cord-286451-ujo72w06 86 9 achieved achieve VBN cord-286451-ujo72w06 86 10 by by IN cord-286451-ujo72w06 86 11 reducing reduce VBG cord-286451-ujo72w06 86 12 the the DT cord-286451-ujo72w06 86 13 amount amount NN cord-286451-ujo72w06 86 14 of of IN cord-286451-ujo72w06 86 15 separate separate JJ cord-286451-ujo72w06 86 16 tests test NNS cord-286451-ujo72w06 86 17 needed need VBN cord-286451-ujo72w06 86 18 to to TO cord-286451-ujo72w06 86 19 be be VB cord-286451-ujo72w06 86 20 carried carry VBN cord-286451-ujo72w06 86 21 out out RP cord-286451-ujo72w06 86 22 . . . cord-286451-ujo72w06 87 1 This this DT cord-286451-ujo72w06 87 2 ensures ensure VBZ cord-286451-ujo72w06 87 3 more more JJR cord-286451-ujo72w06 87 4 samples sample NNS cord-286451-ujo72w06 87 5 can can MD cord-286451-ujo72w06 87 6 be be VB cord-286451-ujo72w06 87 7 tested test VBN cord-286451-ujo72w06 87 8 within within IN cord-286451-ujo72w06 87 9 the the DT cord-286451-ujo72w06 87 10 working work VBG cord-286451-ujo72w06 87 11 day day NN cord-286451-ujo72w06 87 12 ( ( -LRB- cord-286451-ujo72w06 87 13 Gunson Gunson NNP cord-286451-ujo72w06 87 14 et et FW cord-286451-ujo72w06 87 15 al al NNP cord-286451-ujo72w06 87 16 . . NNP cord-286451-ujo72w06 87 17 , , , cord-286451-ujo72w06 87 18 2008 2008 CD cord-286451-ujo72w06 87 19 ) ) -RRB- cord-286451-ujo72w06 87 20 . . . cord-286451-ujo72w06 88 1 Since since IN cord-286451-ujo72w06 88 2 the the DT cord-286451-ujo72w06 88 3 introduction introduction NN cord-286451-ujo72w06 88 4 of of IN cord-286451-ujo72w06 88 5 the the DT cord-286451-ujo72w06 88 6 real real JJ cord-286451-ujo72w06 88 7 - - HYPH cord-286451-ujo72w06 88 8 time time NN cord-286451-ujo72w06 88 9 PCR pcr NN cord-286451-ujo72w06 88 10 multiplex multiplex NN cord-286451-ujo72w06 88 11 in in IN cord-286451-ujo72w06 88 12 2007 2007 CD cord-286451-ujo72w06 88 13 the the DT cord-286451-ujo72w06 88 14 turn turn NN cord-286451-ujo72w06 88 15 around around IN cord-286451-ujo72w06 88 16 time time NN cord-286451-ujo72w06 88 17 ( ( -LRB- cord-286451-ujo72w06 88 18 per per IN cord-286451-ujo72w06 88 19 sample sample NN cord-286451-ujo72w06 88 20 ) ) -RRB- cord-286451-ujo72w06 88 21 has have VBZ cord-286451-ujo72w06 88 22 reduced reduce VBN cord-286451-ujo72w06 88 23 from from IN cord-286451-ujo72w06 88 24 an an DT cord-286451-ujo72w06 88 25 average average NN cord-286451-ujo72w06 88 26 of of IN cord-286451-ujo72w06 88 27 4.5 4.5 CD cord-286451-ujo72w06 88 28 - - SYM cord-286451-ujo72w06 88 29 2 2 CD cord-286451-ujo72w06 88 30 working working NN cord-286451-ujo72w06 88 31 days day NNS cord-286451-ujo72w06 88 32 ( ( -LRB- cord-286451-ujo72w06 88 33 Table table NN cord-286451-ujo72w06 88 34 5 5 CD cord-286451-ujo72w06 88 35 ) ) -RRB- cord-286451-ujo72w06 88 36 . . . cord-286451-ujo72w06 89 1 In in IN cord-286451-ujo72w06 89 2 addition addition NN cord-286451-ujo72w06 89 3 the the DT cord-286451-ujo72w06 89 4 percentage percentage NN cord-286451-ujo72w06 89 5 of of IN cord-286451-ujo72w06 89 6 positive positive JJ cord-286451-ujo72w06 89 7 samples sample NNS cord-286451-ujo72w06 89 8 also also RB cord-286451-ujo72w06 89 9 increased increase VBD cord-286451-ujo72w06 89 10 since since IN cord-286451-ujo72w06 89 11 this this DT cord-286451-ujo72w06 89 12 time time NN cord-286451-ujo72w06 89 13 . . . cord-286451-ujo72w06 90 1 The the DT cord-286451-ujo72w06 90 2 reason reason NN cord-286451-ujo72w06 90 3 for for IN cord-286451-ujo72w06 90 4 this this DT cord-286451-ujo72w06 90 5 increase increase NN cord-286451-ujo72w06 90 6 in in IN cord-286451-ujo72w06 90 7 detection detection NN cord-286451-ujo72w06 90 8 rate rate NN cord-286451-ujo72w06 90 9 is be VBZ cord-286451-ujo72w06 90 10 unclear unclear JJ cord-286451-ujo72w06 90 11 . . . cord-286451-ujo72w06 91 1 It -PRON- PRP cord-286451-ujo72w06 91 2 may may MD cord-286451-ujo72w06 91 3 indicate indicate VB cord-286451-ujo72w06 91 4 better well JJR cord-286451-ujo72w06 91 5 sampling sampling NN cord-286451-ujo72w06 91 6 by by IN cord-286451-ujo72w06 91 7 clinicians clinician NNS cord-286451-ujo72w06 91 8 or or CC cord-286451-ujo72w06 91 9 could could MD cord-286451-ujo72w06 91 10 be be VB cord-286451-ujo72w06 91 11 due due JJ cord-286451-ujo72w06 91 12 to to IN cord-286451-ujo72w06 91 13 the the DT cord-286451-ujo72w06 91 14 implementation implementation NN cord-286451-ujo72w06 91 15 of of IN cord-286451-ujo72w06 91 16 the the DT cord-286451-ujo72w06 91 17 new new JJ cord-286451-ujo72w06 91 18 C. C. NNP cord-286451-ujo72w06 91 19 trachomatis trachomatis NN cord-286451-ujo72w06 91 20 real real JJ cord-286451-ujo72w06 91 21 time time NN cord-286451-ujo72w06 91 22 PCR pcr NN cord-286451-ujo72w06 91 23 method method NN cord-286451-ujo72w06 91 24 . . . cord-286451-ujo72w06 92 1 Multiplex multiplex JJ cord-286451-ujo72w06 92 2 PCR PCR NNP cord-286451-ujo72w06 92 3 allows allow VBZ cord-286451-ujo72w06 92 4 for for IN cord-286451-ujo72w06 92 5 the the DT cord-286451-ujo72w06 92 6 rapid rapid JJ cord-286451-ujo72w06 92 7 differentiation differentiation NN cord-286451-ujo72w06 92 8 between between IN cord-286451-ujo72w06 92 9 mild mild JJ cord-286451-ujo72w06 92 10 and and CC cord-286451-ujo72w06 92 11 potentially potentially RB cord-286451-ujo72w06 92 12 serious serious JJ cord-286451-ujo72w06 92 13 causes cause NNS cord-286451-ujo72w06 92 14 of of IN cord-286451-ujo72w06 92 15 conjunctivitis conjunctivitis NN cord-286451-ujo72w06 92 16 that that WDT cord-286451-ujo72w06 92 17 may may MD cord-286451-ujo72w06 92 18 be be VB cord-286451-ujo72w06 92 19 difficult difficult JJ cord-286451-ujo72w06 92 20 to to TO cord-286451-ujo72w06 92 21 distinguish distinguish VB cord-286451-ujo72w06 92 22 clinically clinically RB cord-286451-ujo72w06 92 23 . . . cord-286451-ujo72w06 93 1 For for IN cord-286451-ujo72w06 93 2 example example NN cord-286451-ujo72w06 93 3 , , , cord-286451-ujo72w06 93 4 HSV HSV NNP cord-286451-ujo72w06 93 5 may may MD cord-286451-ujo72w06 93 6 result result VB cord-286451-ujo72w06 93 7 in in IN cord-286451-ujo72w06 93 8 keratoconjunctivitis keratoconjunctivitis NNP cord-286451-ujo72w06 93 9 that that WDT cord-286451-ujo72w06 93 10 is be VBZ cord-286451-ujo72w06 93 11 indistinguishable indistinguishable JJ cord-286451-ujo72w06 93 12 from from IN cord-286451-ujo72w06 93 13 adenovirus adenovirus NN cord-286451-ujo72w06 93 14 and and CC cord-286451-ujo72w06 93 15 is be VBZ cord-286451-ujo72w06 93 16 the the DT cord-286451-ujo72w06 93 17 leading leading JJ cord-286451-ujo72w06 93 18 cause cause NN cord-286451-ujo72w06 93 19 of of IN cord-286451-ujo72w06 93 20 viral viral RB cord-286451-ujo72w06 93 21 - - HYPH cord-286451-ujo72w06 93 22 induced induce VBN cord-286451-ujo72w06 93 23 blindness blindness NN cord-286451-ujo72w06 93 24 in in IN cord-286451-ujo72w06 93 25 the the DT cord-286451-ujo72w06 93 26 western western JJ cord-286451-ujo72w06 93 27 world world NN cord-286451-ujo72w06 93 28 . . . cord-286451-ujo72w06 94 1 In in IN cord-286451-ujo72w06 94 2 addition addition NN cord-286451-ujo72w06 94 3 multiplex multiplex NN cord-286451-ujo72w06 94 4 PCR PCR NNP cord-286451-ujo72w06 94 5 allows allow VBZ cord-286451-ujo72w06 94 6 the the DT cord-286451-ujo72w06 94 7 screening screening NN cord-286451-ujo72w06 94 8 of of IN cord-286451-ujo72w06 94 9 both both DT cord-286451-ujo72w06 94 10 viral viral JJ cord-286451-ujo72w06 94 11 and and CC cord-286451-ujo72w06 94 12 bacterial bacterial JJ cord-286451-ujo72w06 94 13 causes cause NNS cord-286451-ujo72w06 94 14 of of IN cord-286451-ujo72w06 94 15 conjunctivitis conjunctivitis NN cord-286451-ujo72w06 94 16 which which WDT cord-286451-ujo72w06 94 17 can can MD cord-286451-ujo72w06 94 18 be be VB cord-286451-ujo72w06 94 19 important important JJ cord-286451-ujo72w06 94 20 as as IN cord-286451-ujo72w06 94 21 an an DT cord-286451-ujo72w06 94 22 individual individual NN cord-286451-ujo72w06 94 23 may may MD cord-286451-ujo72w06 94 24 have have VB cord-286451-ujo72w06 94 25 to to TO cord-286451-ujo72w06 94 26 stay stay VB cord-286451-ujo72w06 94 27 off off RP cord-286451-ujo72w06 94 28 work work NN cord-286451-ujo72w06 95 1 /school /school , cord-286451-ujo72w06 95 2 for for IN cord-286451-ujo72w06 95 3 up up IN cord-286451-ujo72w06 95 4 to to TO cord-286451-ujo72w06 95 5 2 2 CD cord-286451-ujo72w06 95 6 weeks week NNS cord-286451-ujo72w06 95 7 if if IN cord-286451-ujo72w06 95 8 the the DT cord-286451-ujo72w06 95 9 infection infection NN cord-286451-ujo72w06 95 10 is be VBZ cord-286451-ujo72w06 95 11 viral viral JJ cord-286451-ujo72w06 95 12 , , , cord-286451-ujo72w06 95 13 whereas whereas IN cord-286451-ujo72w06 95 14 in in IN cord-286451-ujo72w06 95 15 the the DT cord-286451-ujo72w06 95 16 case case NN cord-286451-ujo72w06 95 17 of of IN cord-286451-ujo72w06 95 18 a a DT cord-286451-ujo72w06 95 19 bacterial bacterial JJ cord-286451-ujo72w06 95 20 infection infection NN cord-286451-ujo72w06 95 21 , , , cord-286451-ujo72w06 95 22 such such JJ cord-286451-ujo72w06 95 23 as as IN cord-286451-ujo72w06 95 24 C. C. NNP cord-286451-ujo72w06 95 25 trachomatis trachomatis NN cord-286451-ujo72w06 95 26 , , , cord-286451-ujo72w06 95 27 they -PRON- PRP cord-286451-ujo72w06 95 28 could could MD cord-286451-ujo72w06 95 29 return return VB cord-286451-ujo72w06 95 30 to to IN cord-286451-ujo72w06 95 31 work work NN cord-286451-ujo72w06 95 32 / / SYM cord-286451-ujo72w06 95 33 school school NN cord-286451-ujo72w06 95 34 24 24 CD cord-286451-ujo72w06 95 35 - - SYM cord-286451-ujo72w06 95 36 48 48 CD cord-286451-ujo72w06 95 37 hours hour NNS cord-286451-ujo72w06 95 38 after after IN cord-286451-ujo72w06 95 39 initiating initiate VBG cord-286451-ujo72w06 95 40 antibiotic antibiotic JJ cord-286451-ujo72w06 95 41 treatment treatment NN cord-286451-ujo72w06 95 42 . . . cord-286451-ujo72w06 96 1 Although although IN cord-286451-ujo72w06 96 2 C. C. NNP cord-286451-ujo72w06 96 3 trachomatis trachomatis NN cord-286451-ujo72w06 96 4 may may MD cord-286451-ujo72w06 96 5 not not RB cord-286451-ujo72w06 96 6 be be VB cord-286451-ujo72w06 96 7 a a DT cord-286451-ujo72w06 96 8 serious serious JJ cord-286451-ujo72w06 96 9 cause cause NN cord-286451-ujo72w06 96 10 of of IN cord-286451-ujo72w06 96 11 conjunctivitis conjunctivitis NN cord-286451-ujo72w06 96 12 , , , cord-286451-ujo72w06 96 13 diagnosis diagnosis NN cord-286451-ujo72w06 96 14 is be VBZ cord-286451-ujo72w06 96 15 important important JJ cord-286451-ujo72w06 96 16 in in IN cord-286451-ujo72w06 96 17 aiding aid VBG cord-286451-ujo72w06 96 18 management management NN cord-286451-ujo72w06 96 19 of of IN cord-286451-ujo72w06 96 20 the the DT cord-286451-ujo72w06 96 21 patient patient NN cord-286451-ujo72w06 96 22 as as IN cord-286451-ujo72w06 96 23 it -PRON- PRP cord-286451-ujo72w06 96 24 indicates indicate VBZ cord-286451-ujo72w06 96 25 a a DT cord-286451-ujo72w06 96 26 possible possible JJ cord-286451-ujo72w06 96 27 genital genital JJ cord-286451-ujo72w06 96 28 infection infection NN cord-286451-ujo72w06 96 29 . . . cord-286451-ujo72w06 97 1 The the DT cord-286451-ujo72w06 97 2 patient patient NN cord-286451-ujo72w06 97 3 will will MD cord-286451-ujo72w06 97 4 be be VB cord-286451-ujo72w06 97 5 treated treat VBN cord-286451-ujo72w06 97 6 and and CC cord-286451-ujo72w06 97 7 referred refer VBN cord-286451-ujo72w06 97 8 to to IN cord-286451-ujo72w06 97 9 a a DT cord-286451-ujo72w06 97 10 genitourinary genitourinary JJ cord-286451-ujo72w06 97 11 medicine medicine NN cord-286451-ujo72w06 97 12 ( ( -LRB- cord-286451-ujo72w06 97 13 GUM gum NN cord-286451-ujo72w06 97 14 ) ) -RRB- cord-286451-ujo72w06 97 15 clinic clinic NN cord-286451-ujo72w06 97 16 where where WRB cord-286451-ujo72w06 97 17 further further JJ cord-286451-ujo72w06 97 18 testing testing NN cord-286451-ujo72w06 97 19 can can MD cord-286451-ujo72w06 97 20 be be VB cord-286451-ujo72w06 97 21 offered offer VBN cord-286451-ujo72w06 97 22 . . . cord-286451-ujo72w06 98 1 In in IN cord-286451-ujo72w06 98 2 the the DT cord-286451-ujo72w06 98 3 case case NN cord-286451-ujo72w06 98 4 of of IN cord-286451-ujo72w06 98 5 a a DT cord-286451-ujo72w06 98 6 baby baby NN cord-286451-ujo72w06 98 7 being be VBG cord-286451-ujo72w06 98 8 infected infect VBN cord-286451-ujo72w06 98 9 the the DT cord-286451-ujo72w06 98 10 mother mother NN cord-286451-ujo72w06 98 11 would would MD cord-286451-ujo72w06 98 12 also also RB cord-286451-ujo72w06 98 13 be be VB cord-286451-ujo72w06 98 14 referred refer VBN cord-286451-ujo72w06 98 15 for for IN cord-286451-ujo72w06 98 16 testing testing NN cord-286451-ujo72w06 98 17 and and CC cord-286451-ujo72w06 98 18 treatment treatment NN cord-286451-ujo72w06 98 19 . . . cord-286451-ujo72w06 99 1 Optimisation Optimisation NNP cord-286451-ujo72w06 99 2 of of IN cord-286451-ujo72w06 99 3 PCR PCR NNP cord-286451-ujo72w06 99 4 reactions reaction NNS cord-286451-ujo72w06 99 5 using use VBG cord-286451-ujo72w06 99 6 primer primer NN cord-286451-ujo72w06 99 7 chessboarding chessboarde VBG cord-286451-ujo72w06 99 8 Using use VBG cord-286451-ujo72w06 99 9 multiplex multiplex JJ cord-286451-ujo72w06 99 10 real real JJ cord-286451-ujo72w06 99 11 time time NN cord-286451-ujo72w06 99 12 PCR PCR NNP cord-286451-ujo72w06 99 13 in in IN cord-286451-ujo72w06 99 14 order order NN cord-286451-ujo72w06 99 15 to to TO cord-286451-ujo72w06 99 16 streamline streamline VB cord-286451-ujo72w06 99 17 a a DT cord-286451-ujo72w06 99 18 routine routine JJ cord-286451-ujo72w06 99 19 diagnostic diagnostic JJ cord-286451-ujo72w06 99 20 service service NN cord-286451-ujo72w06 99 21 Development Development NNP cord-286451-ujo72w06 99 22 of of IN cord-286451-ujo72w06 99 23 a a DT cord-286451-ujo72w06 99 24 fluorogenic fluorogenic JJ cord-286451-ujo72w06 99 25 polymerase polymerase NN cord-286451-ujo72w06 99 26 chain chain NN cord-286451-ujo72w06 99 27 reaction reaction NN cord-286451-ujo72w06 99 28 assay assay NN cord-286451-ujo72w06 99 29 ( ( -LRB- cord-286451-ujo72w06 99 30 TaqMan TaqMan NNP cord-286451-ujo72w06 99 31 ) ) -RRB- cord-286451-ujo72w06 99 32 for for IN cord-286451-ujo72w06 99 33 the the DT cord-286451-ujo72w06 99 34 detection detection NN cord-286451-ujo72w06 99 35 and and CC cord-286451-ujo72w06 99 36 quantitation quantitation NN cord-286451-ujo72w06 99 37 of of IN cord-286451-ujo72w06 99 38 varicella varicella NN cord-286451-ujo72w06 99 39 zoster zoster NN cord-286451-ujo72w06 99 40 virus virus NN cord-286451-ujo72w06 99 41 Rapid Rapid NNP cord-286451-ujo72w06 99 42 and and CC cord-286451-ujo72w06 99 43 quantitative quantitative JJ cord-286451-ujo72w06 99 44 detection detection NN cord-286451-ujo72w06 99 45 of of IN cord-286451-ujo72w06 99 46 human human JJ cord-286451-ujo72w06 99 47 adenovirus adenovirus NN cord-286451-ujo72w06 99 48 DNA dna NN cord-286451-ujo72w06 99 49 by by IN cord-286451-ujo72w06 99 50 real real JJ cord-286451-ujo72w06 99 51 - - HYPH cord-286451-ujo72w06 99 52 time time NN cord-286451-ujo72w06 99 53 PCR PCR NNP cord-286451-ujo72w06 99 54 Acute acute JJ cord-286451-ujo72w06 99 55 conjunctivitis conjunctivitis NN cord-286451-ujo72w06 99 56 : : : cord-286451-ujo72w06 99 57 truth truth NN cord-286451-ujo72w06 99 58 and and CC cord-286451-ujo72w06 99 59 misconceptions misconception NNS cord-286451-ujo72w06 99 60 Development Development NNP cord-286451-ujo72w06 99 61 of of IN cord-286451-ujo72w06 99 62 a a DT cord-286451-ujo72w06 99 63 high high JJ cord-286451-ujo72w06 99 64 - - HYPH cord-286451-ujo72w06 99 65 throughput throughput NN cord-286451-ujo72w06 99 66 quantitative quantitative JJ cord-286451-ujo72w06 99 67 assay assay NN cord-286451-ujo72w06 99 68 for for IN cord-286451-ujo72w06 99 69 detecting detect VBG cord-286451-ujo72w06 99 70 herpes herpes NNP cord-286451-ujo72w06 99 71 simplex simplex NN cord-286451-ujo72w06 99 72 virus virus NN cord-286451-ujo72w06 99 73 DNA dna NN cord-286451-ujo72w06 99 74 in in IN cord-286451-ujo72w06 99 75 clinical clinical JJ cord-286451-ujo72w06 99 76 samples sample NNS cord-286451-ujo72w06 99 77 Conjunctivitis conjunctivitis NN cord-286451-ujo72w06 99 78 : : : cord-286451-ujo72w06 99 79 systematic systematic JJ cord-286451-ujo72w06 99 80 approach approach NN cord-286451-ujo72w06 99 81 to to IN cord-286451-ujo72w06 99 82 diagnosis diagnosis NN cord-286451-ujo72w06 99 83 and and CC cord-286451-ujo72w06 99 84 therapy therapy NN cord-286451-ujo72w06 99 85 Diagnosing diagnose VBG cord-286451-ujo72w06 99 86 herpesvirus herpesvirus NN cord-286451-ujo72w06 99 87 infections infection NNS cord-286451-ujo72w06 99 88 by by IN cord-286451-ujo72w06 99 89 real real JJ cord-286451-ujo72w06 99 90 - - HYPH cord-286451-ujo72w06 99 91 time time NN cord-286451-ujo72w06 99 92 amplification amplification NN cord-286451-ujo72w06 99 93 and and CC cord-286451-ujo72w06 99 94 rapid rapid JJ cord-286451-ujo72w06 99 95 culture culture NN