id sid tid token lemma pos cord-277909-rn1dow26 1 1 key key JJ cord-277909-rn1dow26 1 2 : : : cord-277909-rn1dow26 1 3 cord-277909-rn1dow26 cord-277909-rn1dow26 NNS cord-277909-rn1dow26 1 4 authors author NNS cord-277909-rn1dow26 1 5 : : : cord-277909-rn1dow26 1 6 Gunson Gunson NNP cord-277909-rn1dow26 1 7 , , , cord-277909-rn1dow26 1 8 R.N. R.N. NNP cord-277909-rn1dow26 1 9 ; ; : cord-277909-rn1dow26 1 10 Collins Collins NNP cord-277909-rn1dow26 1 11 , , , cord-277909-rn1dow26 1 12 T.C. T.C. NNP cord-277909-rn1dow26 1 13 ; ; : cord-277909-rn1dow26 1 14 Carman Carman NNP cord-277909-rn1dow26 1 15 , , , cord-277909-rn1dow26 1 16 W.F. W.F. NNP cord-277909-rn1dow26 1 17 title title NN cord-277909-rn1dow26 1 18 : : : cord-277909-rn1dow26 1 19 Practical practical JJ cord-277909-rn1dow26 1 20 experience experience NN cord-277909-rn1dow26 1 21 of of IN cord-277909-rn1dow26 1 22 high high JJ cord-277909-rn1dow26 1 23 throughput throughput NN cord-277909-rn1dow26 2 1 real real JJ cord-277909-rn1dow26 2 2 time time NN cord-277909-rn1dow26 2 3 PCR PCR NNP cord-277909-rn1dow26 2 4 in in IN cord-277909-rn1dow26 2 5 the the DT cord-277909-rn1dow26 2 6 routine routine JJ cord-277909-rn1dow26 2 7 diagnostic diagnostic JJ cord-277909-rn1dow26 2 8 virology virology NN cord-277909-rn1dow26 2 9 setting set VBG cord-277909-rn1dow26 2 10 date date NN cord-277909-rn1dow26 2 11 : : : cord-277909-rn1dow26 2 12 2006 2006 CD cord-277909-rn1dow26 2 13 - - HYPH cord-277909-rn1dow26 2 14 02 02 CD cord-277909-rn1dow26 2 15 - - HYPH cord-277909-rn1dow26 2 16 07 07 CD cord-277909-rn1dow26 2 17 journal journal NN cord-277909-rn1dow26 2 18 : : : cord-277909-rn1dow26 3 1 J J NNP cord-277909-rn1dow26 3 2 Clin Clin NNP cord-277909-rn1dow26 3 3 Virol Virol NNP cord-277909-rn1dow26 3 4 DOI DOI NNP cord-277909-rn1dow26 3 5 : : : cord-277909-rn1dow26 3 6 10.1016/ 10.1016/ CD cord-277909-rn1dow26 4 1 j.jcv.2005.12.006 j.jcv.2005.12.006 NNP cord-277909-rn1dow26 4 2 sha sha NNP cord-277909-rn1dow26 4 3 : : : cord-277909-rn1dow26 5 1 779edc3dcfe107c480ade1d87c841a6e11e31177 779edc3dcfe107c480ade1d87c841a6e11e31177 DT cord-277909-rn1dow26 5 2 doc_id doc_id CD cord-277909-rn1dow26 5 3 : : : cord-277909-rn1dow26 6 1 277909 277909 CD cord-277909-rn1dow26 6 2 cord_uid cord_uid NNS cord-277909-rn1dow26 6 3 : : : cord-277909-rn1dow26 6 4 rn1dow26 rn1dow26 NNS cord-277909-rn1dow26 7 1 The the DT cord-277909-rn1dow26 7 2 advent advent NN cord-277909-rn1dow26 7 3 of of IN cord-277909-rn1dow26 7 4 PCR PCR NNP cord-277909-rn1dow26 7 5 has have VBZ cord-277909-rn1dow26 7 6 transformed transform VBN cord-277909-rn1dow26 7 7 the the DT cord-277909-rn1dow26 7 8 utility utility NN cord-277909-rn1dow26 7 9 of of IN cord-277909-rn1dow26 7 10 the the DT cord-277909-rn1dow26 7 11 virus virus NN cord-277909-rn1dow26 7 12 diagnostic diagnostic JJ cord-277909-rn1dow26 7 13 laboratory laboratory NN cord-277909-rn1dow26 7 14 . . . cord-277909-rn1dow26 8 1 In in IN cord-277909-rn1dow26 8 2 comparison comparison NN cord-277909-rn1dow26 8 3 to to IN cord-277909-rn1dow26 8 4 traditional traditional JJ cord-277909-rn1dow26 8 5 gel gel NN cord-277909-rn1dow26 8 6 based base VBN cord-277909-rn1dow26 8 7 PCR PCR NNP cord-277909-rn1dow26 8 8 assays assay NNS cord-277909-rn1dow26 8 9 , , , cord-277909-rn1dow26 8 10 real real JJ cord-277909-rn1dow26 8 11 time time NN cord-277909-rn1dow26 8 12 PCR PCR NNP cord-277909-rn1dow26 8 13 offers offer VBZ cord-277909-rn1dow26 8 14 increased increase VBN cord-277909-rn1dow26 8 15 sensitivity sensitivity NN cord-277909-rn1dow26 8 16 and and CC cord-277909-rn1dow26 8 17 specificity specificity NN cord-277909-rn1dow26 8 18 in in IN cord-277909-rn1dow26 8 19 a a DT cord-277909-rn1dow26 8 20 rapid rapid JJ cord-277909-rn1dow26 8 21 format format NN cord-277909-rn1dow26 8 22 . . . cord-277909-rn1dow26 9 1 Over over IN cord-277909-rn1dow26 9 2 the the DT cord-277909-rn1dow26 9 3 past past JJ cord-277909-rn1dow26 9 4 4 4 CD cord-277909-rn1dow26 9 5 years year NNS cord-277909-rn1dow26 9 6 , , , cord-277909-rn1dow26 9 7 we -PRON- PRP cord-277909-rn1dow26 9 8 have have VBP cord-277909-rn1dow26 9 9 introduced introduce VBN cord-277909-rn1dow26 9 10 a a DT cord-277909-rn1dow26 9 11 number number NN cord-277909-rn1dow26 9 12 of of IN cord-277909-rn1dow26 9 13 qualitative qualitative JJ cord-277909-rn1dow26 9 14 and and CC cord-277909-rn1dow26 9 15 quantitative quantitative JJ cord-277909-rn1dow26 9 16 real real JJ cord-277909-rn1dow26 9 17 time time NN cord-277909-rn1dow26 9 18 PCR pcr NN cord-277909-rn1dow26 9 19 assays assay NNS cord-277909-rn1dow26 9 20 into into IN cord-277909-rn1dow26 9 21 our -PRON- PRP$ cord-277909-rn1dow26 9 22 routine routine JJ cord-277909-rn1dow26 9 23 testing testing NN cord-277909-rn1dow26 9 24 service service NN cord-277909-rn1dow26 9 25 . . . cord-277909-rn1dow26 10 1 During during IN cord-277909-rn1dow26 10 2 this this DT cord-277909-rn1dow26 10 3 period period NN cord-277909-rn1dow26 10 4 , , , cord-277909-rn1dow26 10 5 we -PRON- PRP cord-277909-rn1dow26 10 6 have have VBP cord-277909-rn1dow26 10 7 gained gain VBN cord-277909-rn1dow26 10 8 substantial substantial JJ cord-277909-rn1dow26 10 9 experience experience NN cord-277909-rn1dow26 10 10 relating relate VBG cord-277909-rn1dow26 10 11 to to IN cord-277909-rn1dow26 10 12 the the DT cord-277909-rn1dow26 10 13 development development NN cord-277909-rn1dow26 10 14 and and CC cord-277909-rn1dow26 10 15 implementation implementation NN cord-277909-rn1dow26 10 16 of of IN cord-277909-rn1dow26 10 17 real real JJ cord-277909-rn1dow26 10 18 - - HYPH cord-277909-rn1dow26 10 19 time time NN cord-277909-rn1dow26 10 20 assays assay NNS cord-277909-rn1dow26 10 21 . . . cord-277909-rn1dow26 11 1 Furthermore furthermore RB cord-277909-rn1dow26 11 2 , , , cord-277909-rn1dow26 11 3 we -PRON- PRP cord-277909-rn1dow26 11 4 have have VBP cord-277909-rn1dow26 11 5 developed develop VBN cord-277909-rn1dow26 11 6 strategies strategy NNS cord-277909-rn1dow26 11 7 that that WDT cord-277909-rn1dow26 11 8 have have VBP cord-277909-rn1dow26 11 9 allowed allow VBN cord-277909-rn1dow26 11 10 us -PRON- PRP cord-277909-rn1dow26 11 11 to to TO cord-277909-rn1dow26 11 12 increase increase VB cord-277909-rn1dow26 11 13 our -PRON- PRP$ cord-277909-rn1dow26 11 14 sample sample NN cord-277909-rn1dow26 11 15 throughput throughput NN cord-277909-rn1dow26 11 16 while while IN cord-277909-rn1dow26 11 17 maintaining maintain VBG cord-277909-rn1dow26 11 18 or or CC cord-277909-rn1dow26 11 19 even even RB cord-277909-rn1dow26 11 20 reducing reduce VBG cord-277909-rn1dow26 11 21 turn turn NN cord-277909-rn1dow26 11 22 around around RP cord-277909-rn1dow26 11 23 times time NNS cord-277909-rn1dow26 11 24 . . . cord-277909-rn1dow26 12 1 The the DT cord-277909-rn1dow26 12 2 issues issue NNS cord-277909-rn1dow26 12 3 resulting result VBG cord-277909-rn1dow26 12 4 from from IN cord-277909-rn1dow26 12 5 this this DT cord-277909-rn1dow26 12 6 experience experience NN cord-277909-rn1dow26 12 7 ( ( -LRB- cord-277909-rn1dow26 12 8 some some DT cord-277909-rn1dow26 12 9 of of IN cord-277909-rn1dow26 12 10 it -PRON- PRP cord-277909-rn1dow26 12 11 bad bad JJ cord-277909-rn1dow26 12 12 ) ) -RRB- cord-277909-rn1dow26 12 13 are be VBP cord-277909-rn1dow26 12 14 discussed discuss VBN cord-277909-rn1dow26 12 15 in in IN cord-277909-rn1dow26 12 16 detail detail NN cord-277909-rn1dow26 12 17 with with IN cord-277909-rn1dow26 12 18 the the DT cord-277909-rn1dow26 12 19 aim aim NN cord-277909-rn1dow26 12 20 of of IN cord-277909-rn1dow26 12 21 informing inform VBG cord-277909-rn1dow26 12 22 laboratories laboratory NNS cord-277909-rn1dow26 12 23 that that WDT cord-277909-rn1dow26 12 24 are be VBP cord-277909-rn1dow26 12 25 only only RB cord-277909-rn1dow26 12 26 just just RB cord-277909-rn1dow26 12 27 beginning begin VBG cord-277909-rn1dow26 12 28 to to TO cord-277909-rn1dow26 12 29 investigate investigate VB cord-277909-rn1dow26 12 30 the the DT cord-277909-rn1dow26 12 31 potential potential NN cord-277909-rn1dow26 12 32 of of IN cord-277909-rn1dow26 12 33 this this DT cord-277909-rn1dow26 12 34 technology technology NN cord-277909-rn1dow26 12 35 . . . cord-277909-rn1dow26 13 1 The the DT cord-277909-rn1dow26 13 2 advent advent NN cord-277909-rn1dow26 13 3 of of IN cord-277909-rn1dow26 13 4 polymerase polymerase NN cord-277909-rn1dow26 13 5 chain chain NN cord-277909-rn1dow26 13 6 reaction reaction NN cord-277909-rn1dow26 13 7 ( ( -LRB- cord-277909-rn1dow26 13 8 PCR PCR NNP cord-277909-rn1dow26 13 9 ) ) -RRB- cord-277909-rn1dow26 13 10 has have VBZ cord-277909-rn1dow26 13 11 transformed transform VBN cord-277909-rn1dow26 13 12 the the DT cord-277909-rn1dow26 13 13 utility utility NN cord-277909-rn1dow26 13 14 of of IN cord-277909-rn1dow26 13 15 the the DT cord-277909-rn1dow26 13 16 virus virus NN cord-277909-rn1dow26 13 17 diagnostic diagnostic JJ cord-277909-rn1dow26 13 18 laboratory laboratory NN cord-277909-rn1dow26 13 19 . . . cord-277909-rn1dow26 14 1 In in IN cord-277909-rn1dow26 14 2 comparison comparison NN cord-277909-rn1dow26 14 3 with with IN cord-277909-rn1dow26 14 4 traditional traditional JJ cord-277909-rn1dow26 14 5 methods method NNS cord-277909-rn1dow26 14 6 , , , cord-277909-rn1dow26 14 7 PCR PCR NNP cord-277909-rn1dow26 14 8 offers offer VBZ cord-277909-rn1dow26 14 9 a a DT cord-277909-rn1dow26 14 10 highly highly RB cord-277909-rn1dow26 14 11 sensitive sensitive JJ cord-277909-rn1dow26 14 12 and and CC cord-277909-rn1dow26 14 13 specific specific JJ cord-277909-rn1dow26 14 14 result result NN cord-277909-rn1dow26 14 15 within within IN cord-277909-rn1dow26 14 16 24 24 CD cord-277909-rn1dow26 14 17 - - SYM cord-277909-rn1dow26 14 18 48 48 CD cord-277909-rn1dow26 14 19 h. h. NN cord-277909-rn1dow26 15 1 The the DT cord-277909-rn1dow26 15 2 routine routine JJ cord-277909-rn1dow26 15 3 use use NN cord-277909-rn1dow26 15 4 of of IN cord-277909-rn1dow26 15 5 this this DT cord-277909-rn1dow26 15 6 test test NN cord-277909-rn1dow26 15 7 in in IN cord-277909-rn1dow26 15 8 diagnostic diagnostic JJ cord-277909-rn1dow26 15 9 laboratories laboratory NNS cord-277909-rn1dow26 15 10 has have VBZ cord-277909-rn1dow26 15 11 led lead VBN cord-277909-rn1dow26 15 12 to to IN cord-277909-rn1dow26 15 13 many many JJ cord-277909-rn1dow26 15 14 benefits benefit NNS cord-277909-rn1dow26 15 15 including include VBG cord-277909-rn1dow26 15 16 improved improve VBN cord-277909-rn1dow26 15 17 patient patient JJ cord-277909-rn1dow26 15 18 management management NN cord-277909-rn1dow26 15 19 , , , cord-277909-rn1dow26 15 20 and and CC cord-277909-rn1dow26 15 21 increased increase VBN cord-277909-rn1dow26 15 22 ascertainment ascertainment NN cord-277909-rn1dow26 15 23 of of IN cord-277909-rn1dow26 15 24 previously previously RB cord-277909-rn1dow26 15 25 under under RB cord-277909-rn1dow26 15 26 - - HYPH cord-277909-rn1dow26 15 27 diagnosed diagnose VBN cord-277909-rn1dow26 15 28 and and CC cord-277909-rn1dow26 15 29 undetectable undetectable JJ cord-277909-rn1dow26 15 30 viruses virus NNS cord-277909-rn1dow26 15 31 . . . cord-277909-rn1dow26 16 1 The the DT cord-277909-rn1dow26 16 2 advent advent NN cord-277909-rn1dow26 16 3 of of IN cord-277909-rn1dow26 16 4 real real JJ cord-277909-rn1dow26 16 5 time time NN cord-277909-rn1dow26 16 6 PCR PCR NNP cord-277909-rn1dow26 16 7 technologies technology NNS cord-277909-rn1dow26 16 8 has have VBZ cord-277909-rn1dow26 16 9 further further RB cord-277909-rn1dow26 16 10 improved improve VBN cord-277909-rn1dow26 16 11 upon upon IN cord-277909-rn1dow26 16 12 these these DT cord-277909-rn1dow26 16 13 already already RB cord-277909-rn1dow26 16 14 significant significant JJ cord-277909-rn1dow26 16 15 benefits benefit NNS cord-277909-rn1dow26 16 16 ( ( -LRB- cord-277909-rn1dow26 16 17 Arya Arya NNP cord-277909-rn1dow26 16 18 et et NNP cord-277909-rn1dow26 16 19 al al NNP cord-277909-rn1dow26 16 20 . . NNP cord-277909-rn1dow26 16 21 , , , cord-277909-rn1dow26 16 22 2005 2005 CD cord-277909-rn1dow26 16 23 ; ; : cord-277909-rn1dow26 16 24 Aslanzadeh Aslanzadeh NNP cord-277909-rn1dow26 16 25 , , , cord-277909-rn1dow26 16 26 2004 2004 CD cord-277909-rn1dow26 16 27 ; ; : cord-277909-rn1dow26 16 28 Bustin Bustin NNP cord-277909-rn1dow26 16 29 and and CC cord-277909-rn1dow26 16 30 Nolan Nolan NNP cord-277909-rn1dow26 16 31 , , , cord-277909-rn1dow26 16 32 2004 2004 CD cord-277909-rn1dow26 16 33 ; ; : cord-277909-rn1dow26 16 34 Mackay Mackay NNP cord-277909-rn1dow26 16 35 , , , cord-277909-rn1dow26 16 36 2004 2004 CD cord-277909-rn1dow26 16 37 ; ; : cord-277909-rn1dow26 16 38 Tan Tan NNP cord-277909-rn1dow26 16 39 et et FW cord-277909-rn1dow26 16 40 al al NNP cord-277909-rn1dow26 16 41 . . NNP cord-277909-rn1dow26 16 42 , , , cord-277909-rn1dow26 16 43 2004 2004 CD cord-277909-rn1dow26 16 44 ) ) -RRB- cord-277909-rn1dow26 16 45 . . . cord-277909-rn1dow26 17 1 In in IN cord-277909-rn1dow26 17 2 comparison comparison NN cord-277909-rn1dow26 17 3 to to IN cord-277909-rn1dow26 17 4 traditional traditional JJ cord-277909-rn1dow26 17 5 gel gel NN cord-277909-rn1dow26 17 6 - - HYPH cord-277909-rn1dow26 17 7 based base VBN cord-277909-rn1dow26 17 8 PCR PCR NNP cord-277909-rn1dow26 17 9 assays assay NNS cord-277909-rn1dow26 17 10 , , , cord-277909-rn1dow26 17 11 real real JJ cord-277909-rn1dow26 17 12 time time NN cord-277909-rn1dow26 17 13 PCR PCR NNP cord-277909-rn1dow26 17 14 offers offer VBZ cord-277909-rn1dow26 17 15 increased increase VBN cord-277909-rn1dow26 17 16 sensitivity sensitivity NN cord-277909-rn1dow26 17 17 and and CC cord-277909-rn1dow26 17 18 specificity specificity NN cord-277909-rn1dow26 17 19 in in IN cord-277909-rn1dow26 17 20 a a DT cord-277909-rn1dow26 17 21 rapid rapid JJ cord-277909-rn1dow26 17 22 format format NN cord-277909-rn1dow26 17 23 ( ( -LRB- cord-277909-rn1dow26 17 24 turn turn VB cord-277909-rn1dow26 17 25 around around IN cord-277909-rn1dow26 17 26 time time NN cord-277909-rn1dow26 17 27 from from IN cord-277909-rn1dow26 17 28 sample sample NN cord-277909-rn1dow26 17 29 receipt receipt NN cord-277909-rn1dow26 17 30 to to TO cord-277909-rn1dow26 17 31 result result VB cord-277909-rn1dow26 17 32 < < NNP cord-277909-rn1dow26 17 33 5 5 CD cord-277909-rn1dow26 17 34 h h NN cord-277909-rn1dow26 17 35 ) ) -RRB- cord-277909-rn1dow26 17 36 . . . cord-277909-rn1dow26 18 1 Unlike unlike IN cord-277909-rn1dow26 18 2 traditional traditional JJ cord-277909-rn1dow26 18 3 systems system NNS cord-277909-rn1dow26 18 4 , , , cord-277909-rn1dow26 18 5 which which WDT cord-277909-rn1dow26 18 6 rely rely VBP cord-277909-rn1dow26 18 7 upon upon IN cord-277909-rn1dow26 18 8 endpoint endpoint NN cord-277909-rn1dow26 18 9 analysis analysis NN cord-277909-rn1dow26 18 10 , , , cord-277909-rn1dow26 18 11 real real JJ cord-277909-rn1dow26 18 12 time time NN cord-277909-rn1dow26 18 13 PCR PCR NNP cord-277909-rn1dow26 18 14 assays assay NNS cord-277909-rn1dow26 18 15 visualise visualise VBP cord-277909-rn1dow26 18 16 the the DT cord-277909-rn1dow26 18 17 reaction reaction NN cord-277909-rn1dow26 18 18 as as IN cord-277909-rn1dow26 18 19 it -PRON- PRP cord-277909-rn1dow26 18 20 is be VBZ cord-277909-rn1dow26 18 21 taking take VBG cord-277909-rn1dow26 18 22 place place NN cord-277909-rn1dow26 18 23 allowing allow VBG cord-277909-rn1dow26 18 24 quantification quantification NN cord-277909-rn1dow26 18 25 and and CC cord-277909-rn1dow26 18 26 reaction reaction NN cord-277909-rn1dow26 18 27 analysis analysis NN cord-277909-rn1dow26 18 28 ( ( -LRB- cord-277909-rn1dow26 18 29 e.g. e.g. RB cord-277909-rn1dow26 18 30 , , , cord-277909-rn1dow26 18 31 PCR PCR NNP cord-277909-rn1dow26 18 32 efficiency efficiency NN cord-277909-rn1dow26 18 33 ) ) -RRB- cord-277909-rn1dow26 18 34 . . . cord-277909-rn1dow26 19 1 Since since IN cord-277909-rn1dow26 19 2 real real JJ cord-277909-rn1dow26 19 3 time time NN cord-277909-rn1dow26 19 4 PCR PCR NNP cord-277909-rn1dow26 19 5 reactions reaction NNS cord-277909-rn1dow26 19 6 are be VBP cord-277909-rn1dow26 19 7 performed perform VBN cord-277909-rn1dow26 19 8 in in IN cord-277909-rn1dow26 19 9 a a DT cord-277909-rn1dow26 19 10 closed closed JJ cord-277909-rn1dow26 19 11 system system NN cord-277909-rn1dow26 19 12 ( ( -LRB- cord-277909-rn1dow26 19 13 no no DT cord-277909-rn1dow26 19 14 gel gel NN cord-277909-rn1dow26 19 15 analysis analysis NN cord-277909-rn1dow26 19 16 needed need VBN cord-277909-rn1dow26 19 17 ) ) -RRB- cord-277909-rn1dow26 19 18 the the DT cord-277909-rn1dow26 19 19 risk risk NN cord-277909-rn1dow26 19 20 of of IN cord-277909-rn1dow26 19 21 contamination contamination NN cord-277909-rn1dow26 19 22 has have VBZ cord-277909-rn1dow26 19 23 been be VBN cord-277909-rn1dow26 19 24 substantially substantially RB cord-277909-rn1dow26 19 25 reduced reduce VBN cord-277909-rn1dow26 19 26 . . . cord-277909-rn1dow26 20 1 This this DT cord-277909-rn1dow26 20 2 has have VBZ cord-277909-rn1dow26 20 3 also also RB cord-277909-rn1dow26 20 4 reduced reduce VBN cord-277909-rn1dow26 20 5 the the DT cord-277909-rn1dow26 20 6 requirement requirement NN cord-277909-rn1dow26 20 7 for for IN cord-277909-rn1dow26 20 8 a a DT cord-277909-rn1dow26 20 9 stringent stringent JJ cord-277909-rn1dow26 20 10 laboratory laboratory NN cord-277909-rn1dow26 20 11 structure structure NN cord-277909-rn1dow26 20 12 . . . cord-277909-rn1dow26 21 1 The the DT cord-277909-rn1dow26 21 2 increasing increase VBG cord-277909-rn1dow26 21 3 number number NN cord-277909-rn1dow26 21 4 of of IN cord-277909-rn1dow26 21 5 chemistries chemistry NNS cord-277909-rn1dow26 21 6 and and CC cord-277909-rn1dow26 21 7 platforms platform NNS cord-277909-rn1dow26 21 8 available available JJ cord-277909-rn1dow26 21 9 for for IN cord-277909-rn1dow26 21 10 real real JJ cord-277909-rn1dow26 21 11 time time NN cord-277909-rn1dow26 21 12 PCR PCR NNP cord-277909-rn1dow26 21 13 have have VBP cord-277909-rn1dow26 21 14 reduced reduce VBN cord-277909-rn1dow26 21 15 its -PRON- PRP$ cord-277909-rn1dow26 21 16 overall overall JJ cord-277909-rn1dow26 21 17 cost cost NN cord-277909-rn1dow26 21 18 significantly significantly RB cord-277909-rn1dow26 21 19 making make VBG cord-277909-rn1dow26 21 20 this this DT cord-277909-rn1dow26 21 21 an an DT cord-277909-rn1dow26 21 22 increasingly increasingly RB cord-277909-rn1dow26 21 23 attractive attractive JJ cord-277909-rn1dow26 21 24 technique technique NN cord-277909-rn1dow26 21 25 . . . cord-277909-rn1dow26 22 1 Over over IN cord-277909-rn1dow26 22 2 the the DT cord-277909-rn1dow26 22 3 past past JJ cord-277909-rn1dow26 22 4 4 4 CD cord-277909-rn1dow26 22 5 years year NNS cord-277909-rn1dow26 22 6 we -PRON- PRP cord-277909-rn1dow26 22 7 have have VBP cord-277909-rn1dow26 22 8 introduced introduce VBN cord-277909-rn1dow26 22 9 a a DT cord-277909-rn1dow26 22 10 number number NN cord-277909-rn1dow26 22 11 of of IN cord-277909-rn1dow26 22 12 qualitative qualitative JJ cord-277909-rn1dow26 22 13 and and CC cord-277909-rn1dow26 22 14 quantitative quantitative JJ cord-277909-rn1dow26 22 15 real real JJ cord-277909-rn1dow26 22 16 time time NN cord-277909-rn1dow26 22 17 PCR pcr NN cord-277909-rn1dow26 22 18 assays assay NNS cord-277909-rn1dow26 22 19 into into IN cord-277909-rn1dow26 22 20 our -PRON- PRP$ cord-277909-rn1dow26 22 21 routine routine JJ cord-277909-rn1dow26 22 22 testing testing NN cord-277909-rn1dow26 22 23 service service NN cord-277909-rn1dow26 22 24 . . . cord-277909-rn1dow26 23 1 These these DT cord-277909-rn1dow26 23 2 include include VBP cord-277909-rn1dow26 23 3 assays assay NNS cord-277909-rn1dow26 23 4 for for IN cord-277909-rn1dow26 23 5 the the DT cord-277909-rn1dow26 23 6 detection detection NN cord-277909-rn1dow26 23 7 of of IN cord-277909-rn1dow26 23 8 influenza influenza NN cord-277909-rn1dow26 23 9 A a NN cord-277909-rn1dow26 23 10 , , , cord-277909-rn1dow26 23 11 B B NNP cord-277909-rn1dow26 23 12 and and CC cord-277909-rn1dow26 23 13 C C NNP cord-277909-rn1dow26 23 14 , , , cord-277909-rn1dow26 23 15 human human JJ cord-277909-rn1dow26 23 16 metapneumovirus metapneumovirus NN cord-277909-rn1dow26 23 17 , , , cord-277909-rn1dow26 23 18 respiratory respiratory JJ cord-277909-rn1dow26 23 19 syncytial syncytial JJ cord-277909-rn1dow26 23 20 viruses virus NNS cord-277909-rn1dow26 23 21 ( ( -LRB- cord-277909-rn1dow26 23 22 RSV RSV NNP cord-277909-rn1dow26 23 23 ) ) -RRB- cord-277909-rn1dow26 23 24 A a NN cord-277909-rn1dow26 23 25 and and CC cord-277909-rn1dow26 23 26 B b NN cord-277909-rn1dow26 23 27 , , , cord-277909-rn1dow26 23 28 rhinovirus rhinovirus NN cord-277909-rn1dow26 23 29 , , , cord-277909-rn1dow26 23 30 parainfluenza parainfluenza NNP cord-277909-rn1dow26 23 31 viruses virus NNS cord-277909-rn1dow26 23 32 1 1 CD cord-277909-rn1dow26 23 33 - - SYM cord-277909-rn1dow26 23 34 4 4 CD cord-277909-rn1dow26 23 35 , , , cord-277909-rn1dow26 23 36 coronaviruses coronaviruse NNS cord-277909-rn1dow26 23 37 NL63 NL63 NNP cord-277909-rn1dow26 23 38 , , , cord-277909-rn1dow26 23 39 OC43 OC43 NNP cord-277909-rn1dow26 23 40 and and CC cord-277909-rn1dow26 23 41 229E 229e CD cord-277909-rn1dow26 23 42 , , , cord-277909-rn1dow26 23 43 Chlamydia Chlamydia NNP cord-277909-rn1dow26 23 44 pneumoniae pneumoniae NN cord-277909-rn1dow26 23 45 , , , cord-277909-rn1dow26 23 46 Mycoplasma mycoplasma NN cord-277909-rn1dow26 23 47 pneumoniae pneumoniae NN cord-277909-rn1dow26 23 48 , , , cord-277909-rn1dow26 23 49 Pneumocystis Pneumocystis NNP cord-277909-rn1dow26 23 50 jiroveci jiroveci NNP cord-277909-rn1dow26 23 51 , , , cord-277909-rn1dow26 23 52 varicella varicella NN cord-277909-rn1dow26 23 53 zoster zoster NN cord-277909-rn1dow26 23 54 virus virus NN cord-277909-rn1dow26 23 55 ( ( -LRB- cord-277909-rn1dow26 23 56 VZV VZV NNP cord-277909-rn1dow26 23 57 ) ) -RRB- cord-277909-rn1dow26 23 58 , , , cord-277909-rn1dow26 23 59 herpes herpes NN cord-277909-rn1dow26 23 60 simplex simplex NNP cord-277909-rn1dow26 23 61 virus virus NN cord-277909-rn1dow26 23 62 ( ( -LRB- cord-277909-rn1dow26 23 63 HSV HSV NNP cord-277909-rn1dow26 23 64 ) ) -RRB- cord-277909-rn1dow26 23 65 1 1 CD cord-277909-rn1dow26 23 66 and and CC cord-277909-rn1dow26 23 67 2 2 CD cord-277909-rn1dow26 23 68 , , , cord-277909-rn1dow26 23 69 cytomegalovirus cytomegalovirus NNP cord-277909-rn1dow26 23 70 ( ( -LRB- cord-277909-rn1dow26 23 71 CMV CMV NNP cord-277909-rn1dow26 23 72 ) ) -RRB- cord-277909-rn1dow26 23 73 , , , cord-277909-rn1dow26 23 74 Epstien Epstien NNP cord-277909-rn1dow26 23 75 Barr Barr NNP cord-277909-rn1dow26 23 76 virus virus NN cord-277909-rn1dow26 23 77 ( ( -LRB- cord-277909-rn1dow26 23 78 EBV EBV NNP cord-277909-rn1dow26 23 79 ) ) -RRB- cord-277909-rn1dow26 23 80 , , , cord-277909-rn1dow26 23 81 HHV-6 HHV-6 NNP cord-277909-rn1dow26 23 82 , , , cord-277909-rn1dow26 23 83 HHV-7 HHV-7 NNP cord-277909-rn1dow26 23 84 , , , cord-277909-rn1dow26 23 85 norovirus norovirus NN cord-277909-rn1dow26 23 86 , , , cord-277909-rn1dow26 23 87 adenovirus adenovirus NN cord-277909-rn1dow26 23 88 , , , cord-277909-rn1dow26 23 89 rotavirus rotavirus NN cord-277909-rn1dow26 23 90 , , , cord-277909-rn1dow26 23 91 astrovirus astrovirus NNP cord-277909-rn1dow26 23 92 , , , cord-277909-rn1dow26 23 93 sapovirus sapovirus NNP cord-277909-rn1dow26 23 94 , , , cord-277909-rn1dow26 23 95 erythrovirus erythrovirus NNP cord-277909-rn1dow26 23 96 B19 B19 NNP cord-277909-rn1dow26 23 97 , , , cord-277909-rn1dow26 23 98 mumps mumps NN cord-277909-rn1dow26 23 99 , , , cord-277909-rn1dow26 23 100 Chlamydia Chlamydia NNP cord-277909-rn1dow26 23 101 trachomatis trachomatis NN cord-277909-rn1dow26 23 102 , , , cord-277909-rn1dow26 24 1 Mycoplasma mycoplasma NN cord-277909-rn1dow26 24 2 genitalium genitalium NN cord-277909-rn1dow26 24 3 , , , cord-277909-rn1dow26 24 4 Nesseria Nesseria NNP cord-277909-rn1dow26 24 5 gonnorhoeae gonnorhoeae NN cord-277909-rn1dow26 24 6 and and CC cord-277909-rn1dow26 24 7 enterovirus enterovirus NN cord-277909-rn1dow26 24 8 . . . cord-277909-rn1dow26 25 1 Each each DT cord-277909-rn1dow26 25 2 year year NN cord-277909-rn1dow26 25 3 we -PRON- PRP cord-277909-rn1dow26 25 4 carry carry VBP cord-277909-rn1dow26 25 5 out out RP cord-277909-rn1dow26 25 6 more more JJR cord-277909-rn1dow26 25 7 than than IN cord-277909-rn1dow26 25 8 84,000 84,000 CD cord-277909-rn1dow26 25 9 PCR PCR NNP cord-277909-rn1dow26 25 10 tests test NNS cord-277909-rn1dow26 25 11 . . . cord-277909-rn1dow26 26 1 During during IN cord-277909-rn1dow26 26 2 this this DT cord-277909-rn1dow26 26 3 period period NN cord-277909-rn1dow26 26 4 we -PRON- PRP cord-277909-rn1dow26 26 5 have have VBP cord-277909-rn1dow26 26 6 gained gain VBN cord-277909-rn1dow26 26 7 substantial substantial JJ cord-277909-rn1dow26 26 8 experience experience NN cord-277909-rn1dow26 26 9 relating relate VBG cord-277909-rn1dow26 26 10 to to IN cord-277909-rn1dow26 26 11 the the DT cord-277909-rn1dow26 26 12 development development NN cord-277909-rn1dow26 26 13 and and CC cord-277909-rn1dow26 26 14 implementation implementation NN cord-277909-rn1dow26 26 15 of of IN cord-277909-rn1dow26 26 16 real real JJ cord-277909-rn1dow26 26 17 time time NN cord-277909-rn1dow26 26 18 assays assay NNS cord-277909-rn1dow26 26 19 . . . cord-277909-rn1dow26 27 1 Furthermore furthermore RB cord-277909-rn1dow26 27 2 we -PRON- PRP cord-277909-rn1dow26 27 3 have have VBP cord-277909-rn1dow26 27 4 developed develop VBN cord-277909-rn1dow26 27 5 strategies strategy NNS cord-277909-rn1dow26 27 6 that that WDT cord-277909-rn1dow26 27 7 have have VBP cord-277909-rn1dow26 27 8 allowed allow VBN cord-277909-rn1dow26 27 9 us -PRON- PRP cord-277909-rn1dow26 27 10 to to TO cord-277909-rn1dow26 27 11 increase increase VB cord-277909-rn1dow26 27 12 our -PRON- PRP$ cord-277909-rn1dow26 27 13 sample sample NN cord-277909-rn1dow26 27 14 throughput throughput NN cord-277909-rn1dow26 27 15 while while IN cord-277909-rn1dow26 27 16 maintaining maintain VBG cord-277909-rn1dow26 27 17 or or CC cord-277909-rn1dow26 27 18 even even RB cord-277909-rn1dow26 27 19 reducing reduce VBG cord-277909-rn1dow26 27 20 turn turn NN cord-277909-rn1dow26 27 21 around around RP cord-277909-rn1dow26 27 22 times time NNS cord-277909-rn1dow26 27 23 . . . cord-277909-rn1dow26 28 1 The the DT cord-277909-rn1dow26 28 2 issues issue NNS cord-277909-rn1dow26 28 3 resulting result VBG cord-277909-rn1dow26 28 4 from from IN cord-277909-rn1dow26 28 5 this this DT cord-277909-rn1dow26 28 6 experience experience NN cord-277909-rn1dow26 28 7 ( ( -LRB- cord-277909-rn1dow26 28 8 some some DT cord-277909-rn1dow26 28 9 of of IN cord-277909-rn1dow26 28 10 it -PRON- PRP cord-277909-rn1dow26 28 11 bad bad JJ cord-277909-rn1dow26 28 12 ) ) -RRB- cord-277909-rn1dow26 28 13 are be VBP cord-277909-rn1dow26 28 14 discussed discuss VBN cord-277909-rn1dow26 28 15 in in IN cord-277909-rn1dow26 28 16 detail detail NN cord-277909-rn1dow26 28 17 below below IN cord-277909-rn1dow26 28 18 with with IN cord-277909-rn1dow26 28 19 the the DT cord-277909-rn1dow26 28 20 aim aim NN cord-277909-rn1dow26 28 21 of of IN cord-277909-rn1dow26 28 22 informing inform VBG cord-277909-rn1dow26 28 23 labo labo NNP cord-277909-rn1dow26 28 24 - - HYPH cord-277909-rn1dow26 28 25 ratories ratories NNP cord-277909-rn1dow26 28 26 that that WDT cord-277909-rn1dow26 28 27 are be VBP cord-277909-rn1dow26 28 28 only only RB cord-277909-rn1dow26 28 29 just just RB cord-277909-rn1dow26 28 30 beginning begin VBG cord-277909-rn1dow26 28 31 to to TO cord-277909-rn1dow26 28 32 investigate investigate VB cord-277909-rn1dow26 28 33 the the DT cord-277909-rn1dow26 28 34 potential potential NN cord-277909-rn1dow26 28 35 of of IN cord-277909-rn1dow26 28 36 this this DT cord-277909-rn1dow26 28 37 technology technology NN cord-277909-rn1dow26 28 38 . . . cord-277909-rn1dow26 29 1 There there EX cord-277909-rn1dow26 29 2 are be VBP cord-277909-rn1dow26 29 3 numerous numerous JJ cord-277909-rn1dow26 29 4 chemistries chemistry NNS cord-277909-rn1dow26 29 5 available available JJ cord-277909-rn1dow26 29 6 to to TO cord-277909-rn1dow26 29 7 carry carry VB cord-277909-rn1dow26 29 8 out out RP cord-277909-rn1dow26 29 9 real real JJ cord-277909-rn1dow26 29 10 time time NN cord-277909-rn1dow26 29 11 PCR PCR NNP cord-277909-rn1dow26 29 12 . . . cord-277909-rn1dow26 30 1 These these DT cord-277909-rn1dow26 30 2 include include VBP cord-277909-rn1dow26 30 3 dual dual JJ cord-277909-rn1dow26 30 4 labelled label VBN cord-277909-rn1dow26 30 5 probes probe NNS cord-277909-rn1dow26 30 6 ( ( -LRB- cord-277909-rn1dow26 30 7 often often RB cord-277909-rn1dow26 30 8 known know VBN cord-277909-rn1dow26 30 9 as as IN cord-277909-rn1dow26 30 10 TaqMan TaqMan NNP cord-277909-rn1dow26 30 11 TM TM NNP cord-277909-rn1dow26 30 12 probes probe NNS cord-277909-rn1dow26 30 13 ) ) -RRB- cord-277909-rn1dow26 30 14 , , , cord-277909-rn1dow26 30 15 minor minor JJ cord-277909-rn1dow26 30 16 groove groove NN cord-277909-rn1dow26 30 17 binding bind VBG cord-277909-rn1dow26 30 18 ( ( -LRB- cord-277909-rn1dow26 30 19 MGB MGB NNP cord-277909-rn1dow26 30 20 ) ) -RRB- cord-277909-rn1dow26 30 21 probes probe NNS cord-277909-rn1dow26 30 22 , , , cord-277909-rn1dow26 30 23 molecular molecular JJ cord-277909-rn1dow26 30 24 beacons beacon NNS cord-277909-rn1dow26 30 25 , , , cord-277909-rn1dow26 30 26 fluorescence fluorescence NN cord-277909-rn1dow26 30 27 energy energy NN cord-277909-rn1dow26 30 28 transfer transfer NN cord-277909-rn1dow26 30 29 ( ( -LRB- cord-277909-rn1dow26 30 30 FRET fret NN cord-277909-rn1dow26 30 31 ) ) -RRB- cord-277909-rn1dow26 30 32 probes probe NNS cord-277909-rn1dow26 30 33 , , , cord-277909-rn1dow26 30 34 intercalating intercalating NN cord-277909-rn1dow26 30 35 dyes dye NNS cord-277909-rn1dow26 30 36 ( ( -LRB- cord-277909-rn1dow26 30 37 such such JJ cord-277909-rn1dow26 30 38 as as IN cord-277909-rn1dow26 30 39 SYBR SYBR NNP cord-277909-rn1dow26 30 40 green green NNP cord-277909-rn1dow26 30 41 ) ) -RRB- cord-277909-rn1dow26 30 42 and and CC cord-277909-rn1dow26 30 43 more more RBR cord-277909-rn1dow26 30 44 recently recently RB cord-277909-rn1dow26 30 45 developed develop VBN cord-277909-rn1dow26 30 46 fluorescent fluorescent NN cord-277909-rn1dow26 30 47 labelled label VBN cord-277909-rn1dow26 30 48 primers primer NNS cord-277909-rn1dow26 30 49 such such JJ cord-277909-rn1dow26 30 50 as as IN cord-277909-rn1dow26 30 51 Sunrise Sunrise NNP cord-277909-rn1dow26 30 52 TM TM NNP cord-277909-rn1dow26 30 53 , , , cord-277909-rn1dow26 30 54 Lux Lux NNP cord-277909-rn1dow26 30 55 TM TM NNP cord-277909-rn1dow26 30 56 or or CC cord-277909-rn1dow26 30 57 Scorpion Scorpion NNP cord-277909-rn1dow26 30 58 primers primer NNS cord-277909-rn1dow26 30 59 TM TM NNP cord-277909-rn1dow26 30 60 . . . cord-277909-rn1dow26 31 1 The the DT cord-277909-rn1dow26 31 2 advantages advantage NNS cord-277909-rn1dow26 31 3 and and CC cord-277909-rn1dow26 31 4 disadvantages disadvantage NNS cord-277909-rn1dow26 31 5 of of IN cord-277909-rn1dow26 31 6 each each DT cord-277909-rn1dow26 31 7 chemistry chemistry NN cord-277909-rn1dow26 31 8 are be VBP cord-277909-rn1dow26 31 9 discussed discuss VBN cord-277909-rn1dow26 31 10 ( ( -LRB- cord-277909-rn1dow26 32 1 Arya Arya NNP cord-277909-rn1dow26 32 2 et et NNP cord-277909-rn1dow26 32 3 al al NNP cord-277909-rn1dow26 32 4 . . NNP cord-277909-rn1dow26 32 5 , , , cord-277909-rn1dow26 32 6 2005 2005 CD cord-277909-rn1dow26 32 7 ; ; : cord-277909-rn1dow26 32 8 Aslanzadeh Aslanzadeh NNP cord-277909-rn1dow26 32 9 , , , cord-277909-rn1dow26 32 10 2004 2004 CD cord-277909-rn1dow26 32 11 ; ; : cord-277909-rn1dow26 32 12 Bustin Bustin NNP cord-277909-rn1dow26 32 13 and and CC cord-277909-rn1dow26 32 14 Nolan Nolan NNP cord-277909-rn1dow26 32 15 , , , cord-277909-rn1dow26 32 16 2004 2004 CD cord-277909-rn1dow26 32 17 ; ; : cord-277909-rn1dow26 32 18 Mackay Mackay NNP cord-277909-rn1dow26 32 19 , , , cord-277909-rn1dow26 32 20 2004 2004 CD cord-277909-rn1dow26 32 21 ; ; : cord-277909-rn1dow26 32 22 Tan Tan NNP cord-277909-rn1dow26 32 23 et et FW cord-277909-rn1dow26 32 24 al al NNP cord-277909-rn1dow26 32 25 . . NNP cord-277909-rn1dow26 32 26 , , , cord-277909-rn1dow26 32 27 2004 2004 CD cord-277909-rn1dow26 32 28 ) ) -RRB- cord-277909-rn1dow26 32 29 ( ( -LRB- cord-277909-rn1dow26 32 30 Table table NN cord-277909-rn1dow26 32 31 1 1 CD cord-277909-rn1dow26 32 32 ) ) -RRB- cord-277909-rn1dow26 32 33 . . . cord-277909-rn1dow26 33 1 Most Most JJS cord-277909-rn1dow26 33 2 of of IN cord-277909-rn1dow26 33 3 the the DT cord-277909-rn1dow26 33 4 published publish VBN cord-277909-rn1dow26 33 5 real real JJ cord-277909-rn1dow26 33 6 time time NN cord-277909-rn1dow26 33 7 probe probe NN cord-277909-rn1dow26 33 8 based base VBN cord-277909-rn1dow26 33 9 PCR PCR NNP cord-277909-rn1dow26 33 10 assays assay NNS cord-277909-rn1dow26 33 11 for for IN cord-277909-rn1dow26 33 12 viral viral JJ cord-277909-rn1dow26 33 13 diagnosis diagnosis NN cord-277909-rn1dow26 33 14 utilise utilise VBP cord-277909-rn1dow26 33 15 either either DT cord-277909-rn1dow26 33 16 molecular molecular JJ cord-277909-rn1dow26 33 17 beacons beacon NNS cord-277909-rn1dow26 33 18 or or CC cord-277909-rn1dow26 33 19 dual dual JJ cord-277909-rn1dow26 33 20 labelled label VBN cord-277909-rn1dow26 33 21 probes probe NNS cord-277909-rn1dow26 33 22 although although IN cord-277909-rn1dow26 33 23 more more JJR cord-277909-rn1dow26 33 24 recent recent JJ cord-277909-rn1dow26 33 25 publications publication NNS cord-277909-rn1dow26 33 26 tend tend VBP cord-277909-rn1dow26 33 27 to to TO cord-277909-rn1dow26 33 28 favour favour VB cord-277909-rn1dow26 33 29 the the DT cord-277909-rn1dow26 33 30 use use NN cord-277909-rn1dow26 33 31 of of IN cord-277909-rn1dow26 33 32 dual dual JJ cord-277909-rn1dow26 33 33 labelled label VBN cord-277909-rn1dow26 33 34 probes probe NNS cord-277909-rn1dow26 33 35 . . . cord-277909-rn1dow26 34 1 Currently currently RB cord-277909-rn1dow26 34 2 all all DT cord-277909-rn1dow26 34 3 our -PRON- PRP$ cord-277909-rn1dow26 34 4 real real JJ cord-277909-rn1dow26 34 5 time time NN cord-277909-rn1dow26 34 6 PCR PCR NNP cord-277909-rn1dow26 34 7 tests test NNS cord-277909-rn1dow26 34 8 are be VBP cord-277909-rn1dow26 34 9 dual dual JJ cord-277909-rn1dow26 34 10 labelled label VBN cord-277909-rn1dow26 34 11 probe probe NN cord-277909-rn1dow26 34 12 assays assay NNS cord-277909-rn1dow26 34 13 . . . cord-277909-rn1dow26 35 1 However however RB cord-277909-rn1dow26 35 2 , , , cord-277909-rn1dow26 35 3 we -PRON- PRP cord-277909-rn1dow26 35 4 do do VBP cord-277909-rn1dow26 35 5 have have VB cord-277909-rn1dow26 35 6 experience experience NN cord-277909-rn1dow26 35 7 of of IN cord-277909-rn1dow26 35 8 both both DT cord-277909-rn1dow26 35 9 methods method NNS cord-277909-rn1dow26 35 10 and and CC cord-277909-rn1dow26 35 11 have have VBP cord-277909-rn1dow26 35 12 noted note VBN cord-277909-rn1dow26 35 13 that that IN cord-277909-rn1dow26 35 14 there there EX cord-277909-rn1dow26 35 15 are be VBP cord-277909-rn1dow26 35 16 several several JJ cord-277909-rn1dow26 35 17 important important JJ cord-277909-rn1dow26 35 18 differences difference NNS cord-277909-rn1dow26 35 19 between between IN cord-277909-rn1dow26 35 20 these these DT cord-277909-rn1dow26 35 21 two two CD cord-277909-rn1dow26 35 22 systems system NNS cord-277909-rn1dow26 35 23 , , , cord-277909-rn1dow26 35 24 which which WDT cord-277909-rn1dow26 35 25 should should MD cord-277909-rn1dow26 35 26 be be VB cord-277909-rn1dow26 35 27 considered consider VBN cord-277909-rn1dow26 35 28 before before IN cord-277909-rn1dow26 35 29 developing develop VBG cord-277909-rn1dow26 35 30 or or CC cord-277909-rn1dow26 35 31 implementing implement VBG cord-277909-rn1dow26 35 32 a a DT cord-277909-rn1dow26 35 33 diagnostic diagnostic JJ cord-277909-rn1dow26 35 34 virology virology NN cord-277909-rn1dow26 35 35 test test NN cord-277909-rn1dow26 35 36 . . . cord-277909-rn1dow26 36 1 Molecular molecular JJ cord-277909-rn1dow26 36 2 beacons beacon NNS cord-277909-rn1dow26 36 3 are be VBP cord-277909-rn1dow26 36 4 very very RB cord-277909-rn1dow26 36 5 specific specific JJ cord-277909-rn1dow26 36 6 ( ( -LRB- cord-277909-rn1dow26 36 7 Tyagi Tyagi NNP cord-277909-rn1dow26 36 8 and and CC cord-277909-rn1dow26 36 9 Kramer Kramer NNP cord-277909-rn1dow26 36 10 , , , cord-277909-rn1dow26 36 11 1996 1996 CD cord-277909-rn1dow26 36 12 ) ) -RRB- cord-277909-rn1dow26 36 13 . . . cord-277909-rn1dow26 37 1 The the DT cord-277909-rn1dow26 37 2 specificity specificity NN cord-277909-rn1dow26 37 3 is be VBZ cord-277909-rn1dow26 37 4 a a DT cord-277909-rn1dow26 37 5 direct direct JJ cord-277909-rn1dow26 37 6 result result NN cord-277909-rn1dow26 37 7 of of IN cord-277909-rn1dow26 37 8 their -PRON- PRP$ cord-277909-rn1dow26 37 9 structure structure NN cord-277909-rn1dow26 37 10 . . . cord-277909-rn1dow26 38 1 In in IN cord-277909-rn1dow26 38 2 free free JJ cord-277909-rn1dow26 38 3 solution solution NN cord-277909-rn1dow26 38 4 a a DT cord-277909-rn1dow26 38 5 molecular molecular JJ cord-277909-rn1dow26 38 6 beacon beacon NN cord-277909-rn1dow26 38 7 adopts adopt VBZ cord-277909-rn1dow26 38 8 a a DT cord-277909-rn1dow26 38 9 hairpin hairpin JJ cord-277909-rn1dow26 38 10 - - HYPH cord-277909-rn1dow26 38 11 loop loop NN cord-277909-rn1dow26 38 12 conformation conformation NN cord-277909-rn1dow26 38 13 in in IN cord-277909-rn1dow26 38 14 which which WDT cord-277909-rn1dow26 38 15 the the DT cord-277909-rn1dow26 38 16 reporter reporter NN cord-277909-rn1dow26 38 17 fluorescence fluorescence NN cord-277909-rn1dow26 38 18 is be VBZ cord-277909-rn1dow26 38 19 quenched quench VBN cord-277909-rn1dow26 38 20 by by IN cord-277909-rn1dow26 38 21 its -PRON- PRP$ cord-277909-rn1dow26 38 22 proximity proximity NN cord-277909-rn1dow26 38 23 to to IN cord-277909-rn1dow26 38 24 the the DT cord-277909-rn1dow26 38 25 quencher quencher NN cord-277909-rn1dow26 38 26 molecule molecule NN cord-277909-rn1dow26 39 1 ( ( -LRB- cord-277909-rn1dow26 39 2 Fig Fig NNP cord-277909-rn1dow26 39 3 . . NNP cord-277909-rn1dow26 39 4 1 1 CD cord-277909-rn1dow26 39 5 ) ) -RRB- cord-277909-rn1dow26 39 6 . . . cord-277909-rn1dow26 40 1 This this DT cord-277909-rn1dow26 40 2 is be VBZ cord-277909-rn1dow26 40 3 a a DT cord-277909-rn1dow26 40 4 very very RB cord-277909-rn1dow26 40 5 stable stable JJ cord-277909-rn1dow26 40 6 state state NN cord-277909-rn1dow26 40 7 and and CC cord-277909-rn1dow26 40 8 a a DT cord-277909-rn1dow26 40 9 molecular molecular JJ cord-277909-rn1dow26 40 10 beacon beacon NN cord-277909-rn1dow26 40 11 will will MD cord-277909-rn1dow26 40 12 only only RB cord-277909-rn1dow26 40 13 bind bind VB cord-277909-rn1dow26 40 14 to to IN cord-277909-rn1dow26 40 15 a a DT cord-277909-rn1dow26 40 16 target target NN cord-277909-rn1dow26 40 17 sequence sequence NN cord-277909-rn1dow26 40 18 , , , cord-277909-rn1dow26 40 19 become become VB cord-277909-rn1dow26 40 20 linear linear JJ cord-277909-rn1dow26 40 21 and and CC cord-277909-rn1dow26 40 22 fluoresce fluoresce VB cord-277909-rn1dow26 40 23 if if IN cord-277909-rn1dow26 40 24 it -PRON- PRP cord-277909-rn1dow26 40 25 is be VBZ cord-277909-rn1dow26 40 26 highly highly RB cord-277909-rn1dow26 40 27 complementary complementary JJ cord-277909-rn1dow26 40 28 . . . cord-277909-rn1dow26 41 1 Any any DT cord-277909-rn1dow26 41 2 nucleotide nucleotide JJ cord-277909-rn1dow26 41 3 differences difference NNS cord-277909-rn1dow26 41 4 between between IN cord-277909-rn1dow26 41 5 the the DT cord-277909-rn1dow26 41 6 beacon beacon NN cord-277909-rn1dow26 41 7 and and CC cord-277909-rn1dow26 41 8 the the DT cord-277909-rn1dow26 41 9 target target NN cord-277909-rn1dow26 41 10 sequence sequence NN cord-277909-rn1dow26 41 11 will will MD cord-277909-rn1dow26 41 12 greatly greatly RB cord-277909-rn1dow26 41 13 reduce reduce VB cord-277909-rn1dow26 41 14 the the DT cord-277909-rn1dow26 41 15 target target NN cord-277909-rn1dow26 41 16 binding bind VBG cord-277909-rn1dow26 41 17 efficiency efficiency NN cord-277909-rn1dow26 41 18 of of IN cord-277909-rn1dow26 41 19 the the DT cord-277909-rn1dow26 41 20 probe probe NN cord-277909-rn1dow26 41 21 . . . cord-277909-rn1dow26 42 1 As as IN cord-277909-rn1dow26 42 2 a a DT cord-277909-rn1dow26 42 3 result result NN cord-277909-rn1dow26 42 4 molecular molecular JJ cord-277909-rn1dow26 42 5 beacons beacon NNS cord-277909-rn1dow26 42 6 have have VBP cord-277909-rn1dow26 42 7 an an DT cord-277909-rn1dow26 42 8 increased increase VBN cord-277909-rn1dow26 42 9 propensity propensity NN cord-277909-rn1dow26 42 10 for for IN cord-277909-rn1dow26 42 11 false false JJ cord-277909-rn1dow26 42 12 negative negative JJ cord-277909-rn1dow26 42 13 results result NNS cord-277909-rn1dow26 42 14 . . . cord-277909-rn1dow26 43 1 We -PRON- PRP cord-277909-rn1dow26 43 2 encountered encounter VBD cord-277909-rn1dow26 43 3 this this DT cord-277909-rn1dow26 43 4 problem problem NN cord-277909-rn1dow26 43 5 during during IN cord-277909-rn1dow26 43 6 the the DT cord-277909-rn1dow26 43 7 implementation implementation NN cord-277909-rn1dow26 43 8 of of IN cord-277909-rn1dow26 43 9 a a DT cord-277909-rn1dow26 43 10 previously previously RB cord-277909-rn1dow26 43 11 published publish VBN cord-277909-rn1dow26 43 12 molecular molecular JJ cord-277909-rn1dow26 43 13 beacon beacon NN cord-277909-rn1dow26 43 14 based base VBN cord-277909-rn1dow26 43 15 test test NN cord-277909-rn1dow26 43 16 for for IN cord-277909-rn1dow26 43 17 the the DT cord-277909-rn1dow26 43 18 detection detection NN cord-277909-rn1dow26 43 19 of of IN cord-277909-rn1dow26 43 20 parainfluenza parainfluenza NNP cord-277909-rn1dow26 43 21 viruses virus NNS cord-277909-rn1dow26 43 22 . . . cord-277909-rn1dow26 44 1 During during IN cord-277909-rn1dow26 44 2 the the DT cord-277909-rn1dow26 44 3 initial initial JJ cord-277909-rn1dow26 44 4 assessment assessment NN cord-277909-rn1dow26 44 5 , , , cord-277909-rn1dow26 44 6 this this DT cord-277909-rn1dow26 44 7 detected detect VBD cord-277909-rn1dow26 44 8 all all DT cord-277909-rn1dow26 44 9 culture culture NN cord-277909-rn1dow26 44 10 / / SYM cord-277909-rn1dow26 44 11 direct direct NNP cord-277909-rn1dow26 44 12 immunoflorescence immunoflorescence NNP cord-277909-rn1dow26 44 13 parainfluenza parainfluenza NNP cord-277909-rn1dow26 44 14 3 3 CD cord-277909-rn1dow26 44 15 positive positive JJ cord-277909-rn1dow26 44 16 samples sample NNS cord-277909-rn1dow26 44 17 detected detect VBN cord-277909-rn1dow26 44 18 between between IN cord-277909-rn1dow26 44 19 2001 2001 CD cord-277909-rn1dow26 44 20 and and CC cord-277909-rn1dow26 44 21 2002 2002 CD cord-277909-rn1dow26 44 22 . . . cord-277909-rn1dow26 45 1 However however RB cord-277909-rn1dow26 45 2 , , , cord-277909-rn1dow26 45 3 all all DT cord-277909-rn1dow26 45 4 parainfluenza parainfluenza VBP cord-277909-rn1dow26 45 5 3 3 CD cord-277909-rn1dow26 45 6 positive positive JJ cord-277909-rn1dow26 45 7 samples sample NNS cord-277909-rn1dow26 45 8 detected detect VBN cord-277909-rn1dow26 45 9 by by IN cord-277909-rn1dow26 45 10 DIF DIF NNP cord-277909-rn1dow26 45 11 or or CC cord-277909-rn1dow26 45 12 culture culture NN cord-277909-rn1dow26 45 13 in in IN cord-277909-rn1dow26 45 14 2003 2003 CD cord-277909-rn1dow26 45 15 were be VBD cord-277909-rn1dow26 45 16 negative negative JJ cord-277909-rn1dow26 45 17 when when WRB cord-277909-rn1dow26 45 18 tested test VBN cord-277909-rn1dow26 45 19 with with IN cord-277909-rn1dow26 45 20 this this DT cord-277909-rn1dow26 45 21 assay assay NN cord-277909-rn1dow26 45 22 . . . cord-277909-rn1dow26 46 1 To to TO cord-277909-rn1dow26 46 2 assess assess VB cord-277909-rn1dow26 46 3 whether whether IN cord-277909-rn1dow26 46 4 the the DT cord-277909-rn1dow26 46 5 primers primer NNS cord-277909-rn1dow26 46 6 were be VBD cord-277909-rn1dow26 46 7 amplifying amplify VBG cord-277909-rn1dow26 46 8 the the DT cord-277909-rn1dow26 46 9 parainfluenza parainfluenza JJ cord-277909-rn1dow26 46 10 3 3 CD cord-277909-rn1dow26 46 11 viral viral JJ cord-277909-rn1dow26 46 12 RNA RNA NNP cord-277909-rn1dow26 46 13 , , , cord-277909-rn1dow26 46 14 SYBR SYBR NNP cord-277909-rn1dow26 46 15 green green NNP cord-277909-rn1dow26 46 16 was be VBD cord-277909-rn1dow26 46 17 added add VBN cord-277909-rn1dow26 46 18 to to IN cord-277909-rn1dow26 46 19 the the DT cord-277909-rn1dow26 46 20 PCR PCR NNP cord-277909-rn1dow26 46 21 reaction reaction NN cord-277909-rn1dow26 46 22 in in IN cord-277909-rn1dow26 46 23 place place NN cord-277909-rn1dow26 46 24 of of IN cord-277909-rn1dow26 46 25 the the DT cord-277909-rn1dow26 46 26 molecular molecular JJ cord-277909-rn1dow26 46 27 beacon beacon NN cord-277909-rn1dow26 46 28 . . . cord-277909-rn1dow26 47 1 The the DT cord-277909-rn1dow26 47 2 formation formation NN cord-277909-rn1dow26 47 3 of of IN cord-277909-rn1dow26 47 4 PCR PCR NNP cord-277909-rn1dow26 47 5 product product NN cord-277909-rn1dow26 47 6 was be VBD cord-277909-rn1dow26 47 7 observed observe VBN cord-277909-rn1dow26 47 8 . . . cord-277909-rn1dow26 48 1 Using use VBG cord-277909-rn1dow26 48 2 melt melt NN cord-277909-rn1dow26 48 3 curve curve NN cord-277909-rn1dow26 48 4 analysis analysis NN cord-277909-rn1dow26 48 5 , , , cord-277909-rn1dow26 48 6 identical identical JJ cord-277909-rn1dow26 48 7 melting melt VBG cord-277909-rn1dow26 48 8 peaks peak NNS cord-277909-rn1dow26 48 9 were be VBD cord-277909-rn1dow26 48 10 observed observe VBN cord-277909-rn1dow26 48 11 in in IN cord-277909-rn1dow26 48 12 all all DT cord-277909-rn1dow26 48 13 parainfluenza parainfluenza JJ cord-277909-rn1dow26 48 14 3 3 CD cord-277909-rn1dow26 48 15 samples sample NNS cord-277909-rn1dow26 48 16 and and CC cord-277909-rn1dow26 48 17 controls control NNS cord-277909-rn1dow26 48 18 ( ( -LRB- cord-277909-rn1dow26 48 19 Fig Fig NNP cord-277909-rn1dow26 48 20 . . NNP cord-277909-rn1dow26 48 21 2 2 CD cord-277909-rn1dow26 48 22 ) ) -RRB- cord-277909-rn1dow26 48 23 . . . cord-277909-rn1dow26 49 1 Running run VBG cord-277909-rn1dow26 49 2 the the DT cord-277909-rn1dow26 49 3 PCR PCR NNP cord-277909-rn1dow26 49 4 products product NNS cord-277909-rn1dow26 49 5 on on IN cord-277909-rn1dow26 49 6 an an DT cord-277909-rn1dow26 49 7 agarose agarose JJ cord-277909-rn1dow26 49 8 gel gel NN cord-277909-rn1dow26 49 9 and and CC cord-277909-rn1dow26 49 10 observing observe VBG cord-277909-rn1dow26 49 11 a a DT cord-277909-rn1dow26 49 12 band band NN cord-277909-rn1dow26 49 13 of of IN cord-277909-rn1dow26 49 14 the the DT cord-277909-rn1dow26 49 15 expected expect VBN cord-277909-rn1dow26 49 16 size size NN cord-277909-rn1dow26 49 17 confirmed confirm VBD cord-277909-rn1dow26 49 18 the the DT cord-277909-rn1dow26 49 19 successful successful JJ cord-277909-rn1dow26 49 20 amplification amplification NN cord-277909-rn1dow26 49 21 of of IN cord-277909-rn1dow26 49 22 parainfluenza parainfluenza NNP cord-277909-rn1dow26 49 23 3 3 CD cord-277909-rn1dow26 49 24 RNA RNA NNP cord-277909-rn1dow26 49 25 by by IN cord-277909-rn1dow26 49 26 the the DT cord-277909-rn1dow26 49 27 primers primer NNS cord-277909-rn1dow26 49 28 . . . cord-277909-rn1dow26 50 1 Based base VBN cord-277909-rn1dow26 50 2 on on IN cord-277909-rn1dow26 50 3 these these DT cord-277909-rn1dow26 50 4 results result NNS cord-277909-rn1dow26 50 5 we -PRON- PRP cord-277909-rn1dow26 50 6 deduced deduce VBD cord-277909-rn1dow26 50 7 that that IN cord-277909-rn1dow26 50 8 the the DT cord-277909-rn1dow26 50 9 molecular molecular JJ cord-277909-rn1dow26 50 10 beacon beacon NN cord-277909-rn1dow26 50 11 was be VBD cord-277909-rn1dow26 50 12 no no RB cord-277909-rn1dow26 50 13 longer long RBR cord-277909-rn1dow26 50 14 complementary complementary JJ cord-277909-rn1dow26 50 15 to to IN cord-277909-rn1dow26 50 16 the the DT cord-277909-rn1dow26 50 17 amplified amplify VBN cord-277909-rn1dow26 50 18 target target NN cord-277909-rn1dow26 50 19 sequence sequence NN cord-277909-rn1dow26 50 20 . . . cord-277909-rn1dow26 51 1 Consequently consequently RB cord-277909-rn1dow26 51 2 , , , cord-277909-rn1dow26 51 3 following follow VBG cord-277909-rn1dow26 51 4 analysis analysis NN cord-277909-rn1dow26 51 5 of of IN cord-277909-rn1dow26 51 6 more more RBR cord-277909-rn1dow26 51 7 recently recently RB cord-277909-rn1dow26 51 8 available available JJ cord-277909-rn1dow26 51 9 sequences sequence NNS cord-277909-rn1dow26 51 10 in in IN cord-277909-rn1dow26 51 11 the the DT cord-277909-rn1dow26 51 12 database database NN cord-277909-rn1dow26 51 13 , , , cord-277909-rn1dow26 51 14 a a DT cord-277909-rn1dow26 51 15 new new JJ cord-277909-rn1dow26 51 16 molecular molecular JJ cord-277909-rn1dow26 51 17 beacon beacon NN cord-277909-rn1dow26 51 18 was be VBD cord-277909-rn1dow26 51 19 designed design VBN cord-277909-rn1dow26 51 20 , , , cord-277909-rn1dow26 51 21 which which WDT cord-277909-rn1dow26 51 22 detected detect VBD cord-277909-rn1dow26 51 23 all all DT cord-277909-rn1dow26 51 24 2003 2003 CD cord-277909-rn1dow26 51 25 parainfluenza parainfluenza NNP cord-277909-rn1dow26 51 26 3 3 CD cord-277909-rn1dow26 51 27 samples sample NNS cord-277909-rn1dow26 51 28 . . . cord-277909-rn1dow26 52 1 Fig fig NN cord-277909-rn1dow26 53 1 Unlike unlike IN cord-277909-rn1dow26 53 2 molecular molecular JJ cord-277909-rn1dow26 53 3 beacons beacon NNS cord-277909-rn1dow26 53 4 , , , cord-277909-rn1dow26 53 5 dual dual JJ cord-277909-rn1dow26 53 6 labelled label VBN cord-277909-rn1dow26 53 7 probes probe NNS cord-277909-rn1dow26 53 8 are be VBP cord-277909-rn1dow26 53 9 in in IN cord-277909-rn1dow26 53 10 a a DT cord-277909-rn1dow26 53 11 permanent permanent JJ cord-277909-rn1dow26 53 12 linear linear JJ cord-277909-rn1dow26 53 13 conformation conformation NN cord-277909-rn1dow26 54 1 ( ( -LRB- cord-277909-rn1dow26 54 2 Lee Lee NNP cord-277909-rn1dow26 54 3 et et NNP cord-277909-rn1dow26 54 4 al al NNP cord-277909-rn1dow26 54 5 . . NNP cord-277909-rn1dow26 54 6 , , , cord-277909-rn1dow26 54 7 1993 1993 CD cord-277909-rn1dow26 54 8 ) ) -RRB- cord-277909-rn1dow26 55 1 ( ( -LRB- cord-277909-rn1dow26 55 2 Fig Fig NNP cord-277909-rn1dow26 55 3 . . . cord-277909-rn1dow26 55 4 3 3 CD cord-277909-rn1dow26 55 5 ) ) -RRB- cord-277909-rn1dow26 55 6 . . . cord-277909-rn1dow26 56 1 Like like IN cord-277909-rn1dow26 56 2 primers primer NNS cord-277909-rn1dow26 56 3 , , , cord-277909-rn1dow26 56 4 they -PRON- PRP cord-277909-rn1dow26 56 5 can can MD cord-277909-rn1dow26 56 6 tolerate tolerate VB cord-277909-rn1dow26 56 7 a a DT cord-277909-rn1dow26 56 8 small small JJ cord-277909-rn1dow26 56 9 number number NN cord-277909-rn1dow26 56 10 of of IN cord-277909-rn1dow26 56 11 mismatches mismatch NNS cord-277909-rn1dow26 56 12 between between IN cord-277909-rn1dow26 56 13 the the DT cord-277909-rn1dow26 56 14 probe probe NN cord-277909-rn1dow26 56 15 and and CC cord-277909-rn1dow26 56 16 target target NN cord-277909-rn1dow26 56 17 and and CC cord-277909-rn1dow26 56 18 still still RB cord-277909-rn1dow26 56 19 bind bind VB cord-277909-rn1dow26 56 20 to to IN cord-277909-rn1dow26 56 21 the the DT cord-277909-rn1dow26 56 22 target target NN cord-277909-rn1dow26 56 23 . . . cord-277909-rn1dow26 57 1 Consequently consequently RB cord-277909-rn1dow26 57 2 , , , cord-277909-rn1dow26 57 3 dual dual JJ cord-277909-rn1dow26 57 4 labelled label VBN cord-277909-rn1dow26 57 5 probes probe NNS cord-277909-rn1dow26 57 6 are be VBP cord-277909-rn1dow26 57 7 less less RBR cord-277909-rn1dow26 57 8 likely likely JJ cord-277909-rn1dow26 57 9 to to TO cord-277909-rn1dow26 57 10 result result VB cord-277909-rn1dow26 57 11 in in IN cord-277909-rn1dow26 57 12 false false JJ cord-277909-rn1dow26 57 13 negative negative JJ cord-277909-rn1dow26 57 14 reactions reaction NNS cord-277909-rn1dow26 57 15 and and CC cord-277909-rn1dow26 57 16 may may MD cord-277909-rn1dow26 57 17 , , , cord-277909-rn1dow26 57 18 in in IN cord-277909-rn1dow26 57 19 comparison comparison NN cord-277909-rn1dow26 57 20 with with IN cord-277909-rn1dow26 57 21 molecular molecular JJ cord-277909-rn1dow26 57 22 beacons beacon NNS cord-277909-rn1dow26 57 23 , , , cord-277909-rn1dow26 57 24 be be VB cord-277909-rn1dow26 57 25 of of IN cord-277909-rn1dow26 57 26 greater great JJR cord-277909-rn1dow26 57 27 use use NN cord-277909-rn1dow26 57 28 in in IN cord-277909-rn1dow26 57 29 viral viral JJ cord-277909-rn1dow26 57 30 diagnosis diagnosis NN cord-277909-rn1dow26 57 31 where where WRB cord-277909-rn1dow26 57 32 occasional occasional JJ cord-277909-rn1dow26 57 33 changes change NNS cord-277909-rn1dow26 57 34 in in IN cord-277909-rn1dow26 57 35 even even RB cord-277909-rn1dow26 57 36 the the DT cord-277909-rn1dow26 57 37 most most RBS cord-277909-rn1dow26 57 38 conserved conserved JJ cord-277909-rn1dow26 57 39 target target NN cord-277909-rn1dow26 57 40 sequence sequence NN cord-277909-rn1dow26 57 41 may may MD cord-277909-rn1dow26 57 42 be be VB cord-277909-rn1dow26 57 43 expected expect VBN cord-277909-rn1dow26 57 44 to to TO cord-277909-rn1dow26 57 45 occur occur VB cord-277909-rn1dow26 57 46 ( ( -LRB- cord-277909-rn1dow26 57 47 although although IN cord-277909-rn1dow26 57 48 it -PRON- PRP cord-277909-rn1dow26 57 49 should should MD cord-277909-rn1dow26 57 50 be be VB cord-277909-rn1dow26 57 51 noted note VBN cord-277909-rn1dow26 57 52 that that IN cord-277909-rn1dow26 57 53 mismatches mismatch NNS cord-277909-rn1dow26 57 54 can can MD cord-277909-rn1dow26 57 55 also also RB cord-277909-rn1dow26 57 56 lead lead VB cord-277909-rn1dow26 57 57 to to IN cord-277909-rn1dow26 57 58 false false JJ cord-277909-rn1dow26 57 59 negative negative JJ cord-277909-rn1dow26 57 60 reactions reaction NNS cord-277909-rn1dow26 57 61 with with IN cord-277909-rn1dow26 57 62 dual dual JJ cord-277909-rn1dow26 57 63 labelled label VBN cord-277909-rn1dow26 57 64 probes probe NNS cord-277909-rn1dow26 57 65 ) ) -RRB- cord-277909-rn1dow26 57 66 . . . cord-277909-rn1dow26 58 1 However however RB cord-277909-rn1dow26 58 2 , , , cord-277909-rn1dow26 58 3 either either DT cord-277909-rn1dow26 58 4 method method NN cord-277909-rn1dow26 58 5 will will MD cord-277909-rn1dow26 58 6 be be VB cord-277909-rn1dow26 58 7 useful useful JJ cord-277909-rn1dow26 58 8 if if IN cord-277909-rn1dow26 58 9 targeting target VBG cord-277909-rn1dow26 58 10 a a DT cord-277909-rn1dow26 58 11 highly highly RB cord-277909-rn1dow26 58 12 conserved conserve VBN cord-277909-rn1dow26 58 13 region region NN cord-277909-rn1dow26 58 14 . . . cord-277909-rn1dow26 59 1 The the DT cord-277909-rn1dow26 59 2 second second JJ cord-277909-rn1dow26 59 3 difference difference NN cord-277909-rn1dow26 59 4 between between IN cord-277909-rn1dow26 59 5 molecular molecular JJ cord-277909-rn1dow26 59 6 beacons beacon NNS cord-277909-rn1dow26 59 7 and and CC cord-277909-rn1dow26 59 8 dual dual JJ cord-277909-rn1dow26 59 9 labelled label VBN cord-277909-rn1dow26 59 10 probe probe NN cord-277909-rn1dow26 59 11 chemistries chemistry NNS cord-277909-rn1dow26 59 12 is be VBZ cord-277909-rn1dow26 59 13 related relate VBN cord-277909-rn1dow26 59 14 to to IN cord-277909-rn1dow26 59 15 the the DT cord-277909-rn1dow26 59 16 normalised normalised JJ cord-277909-rn1dow26 59 17 Fig Fig NNP cord-277909-rn1dow26 59 18 . . . cord-277909-rn1dow26 60 1 2 2 LS cord-277909-rn1dow26 60 2 . . . cord-277909-rn1dow26 61 1 Figure figure NN cord-277909-rn1dow26 61 2 showing show VBG cord-277909-rn1dow26 61 3 assessment assessment NN cord-277909-rn1dow26 61 4 of of IN cord-277909-rn1dow26 61 5 whether whether IN cord-277909-rn1dow26 61 6 real real JJ cord-277909-rn1dow26 61 7 time time NN cord-277909-rn1dow26 61 8 molecular molecular JJ cord-277909-rn1dow26 61 9 beacon beacon NN cord-277909-rn1dow26 61 10 primers primer NNS cord-277909-rn1dow26 61 11 were be VBD cord-277909-rn1dow26 61 12 amplifying amplify VBG cord-277909-rn1dow26 61 13 the the DT cord-277909-rn1dow26 61 14 parainfluenza parainfluenza JJ cord-277909-rn1dow26 61 15 3 3 CD cord-277909-rn1dow26 61 16 viral viral JJ cord-277909-rn1dow26 61 17 RNA RNA NNP cord-277909-rn1dow26 61 18 . . . cord-277909-rn1dow26 62 1 In in IN cord-277909-rn1dow26 62 2 this this DT cord-277909-rn1dow26 62 3 reaction reaction NN cord-277909-rn1dow26 62 4 , , , cord-277909-rn1dow26 62 5 SYBR SYBR NNP cord-277909-rn1dow26 62 6 green green NNP cord-277909-rn1dow26 62 7 was be VBD cord-277909-rn1dow26 62 8 added add VBN cord-277909-rn1dow26 62 9 to to IN cord-277909-rn1dow26 62 10 the the DT cord-277909-rn1dow26 62 11 PCR PCR NNP cord-277909-rn1dow26 62 12 reaction reaction NN cord-277909-rn1dow26 62 13 in in IN cord-277909-rn1dow26 62 14 place place NN cord-277909-rn1dow26 62 15 of of IN cord-277909-rn1dow26 62 16 the the DT cord-277909-rn1dow26 62 17 molecular molecular JJ cord-277909-rn1dow26 62 18 beacon beacon NN cord-277909-rn1dow26 62 19 ( ( -LRB- cord-277909-rn1dow26 62 20 all all DT cord-277909-rn1dow26 62 21 samples sample NNS cord-277909-rn1dow26 62 22 negative negative JJ cord-277909-rn1dow26 62 23 by by IN cord-277909-rn1dow26 62 24 molecular molecular JJ cord-277909-rn1dow26 62 25 beacon beacon NN cord-277909-rn1dow26 62 26 assay assay NN cord-277909-rn1dow26 62 27 ) ) -RRB- cord-277909-rn1dow26 62 28 . . . cord-277909-rn1dow26 63 1 The the DT cord-277909-rn1dow26 63 2 formation formation NN cord-277909-rn1dow26 63 3 of of IN cord-277909-rn1dow26 63 4 PCR PCR NNP cord-277909-rn1dow26 63 5 product product NN cord-277909-rn1dow26 63 6 was be VBD cord-277909-rn1dow26 63 7 observed observe VBN cord-277909-rn1dow26 63 8 . . . cord-277909-rn1dow26 64 1 Using use VBG cord-277909-rn1dow26 64 2 melt melt NN cord-277909-rn1dow26 64 3 curve curve NN cord-277909-rn1dow26 64 4 analysis analysis NN cord-277909-rn1dow26 64 5 , , , cord-277909-rn1dow26 64 6 identical identical JJ cord-277909-rn1dow26 64 7 melting melt VBG cord-277909-rn1dow26 64 8 peaks peak NNS cord-277909-rn1dow26 64 9 were be VBD cord-277909-rn1dow26 64 10 observed observe VBN cord-277909-rn1dow26 64 11 in in IN cord-277909-rn1dow26 64 12 all all DT cord-277909-rn1dow26 64 13 parainfluenza parainfluenza JJ cord-277909-rn1dow26 64 14 3 3 CD cord-277909-rn1dow26 64 15 samples sample NNS cord-277909-rn1dow26 64 16 and and CC cord-277909-rn1dow26 64 17 controls control NNS cord-277909-rn1dow26 64 18 ( ( -LRB- cord-277909-rn1dow26 64 19 http://probes.invitrogen.com/handbook/figures/0710.html http://probes.invitrogen.com/handbook/figures/0710.html NN cord-277909-rn1dow26 64 20 ) ) -RRB- cord-277909-rn1dow26 64 21 . . . cord-277909-rn1dow26 65 1 Fig Fig NNP cord-277909-rn1dow26 65 2 . . . cord-277909-rn1dow26 66 1 3 3 LS cord-277909-rn1dow26 66 2 . . . cord-277909-rn1dow26 67 1 Dual dual JJ cord-277909-rn1dow26 67 2 labelled label VBN cord-277909-rn1dow26 67 3 probes probe NNS cord-277909-rn1dow26 67 4 ( ( -LRB- cord-277909-rn1dow26 67 5 also also RB cord-277909-rn1dow26 67 6 known know VBN cord-277909-rn1dow26 67 7 as as IN cord-277909-rn1dow26 67 8 Taqman Taqman NNP cord-277909-rn1dow26 67 9 TM TM NNP cord-277909-rn1dow26 67 10 probes probe NNS cord-277909-rn1dow26 67 11 ) ) -RRB- cord-277909-rn1dow26 67 12 are be VBP cord-277909-rn1dow26 67 13 oligonucleotides oligonucleotide NNS cord-277909-rn1dow26 67 14 that that WDT cord-277909-rn1dow26 67 15 contain contain VBP cord-277909-rn1dow26 67 16 a a DT cord-277909-rn1dow26 67 17 fluorescent fluorescent JJ cord-277909-rn1dow26 67 18 dye dye NN cord-277909-rn1dow26 67 19 on on IN cord-277909-rn1dow26 67 20 the the DT cord-277909-rn1dow26 67 21 5 5 CD cord-277909-rn1dow26 67 22 base base NN cord-277909-rn1dow26 67 23 , , , cord-277909-rn1dow26 67 24 and and CC cord-277909-rn1dow26 67 25 a a DT cord-277909-rn1dow26 67 26 quenching quenching NN cord-277909-rn1dow26 67 27 dye dye NN cord-277909-rn1dow26 67 28 located locate VBN cord-277909-rn1dow26 67 29 on on IN cord-277909-rn1dow26 67 30 the the DT cord-277909-rn1dow26 67 31 3 3 CD cord-277909-rn1dow26 67 32 base base NN cord-277909-rn1dow26 67 33 . . . cord-277909-rn1dow26 68 1 When when WRB cord-277909-rn1dow26 68 2 excited excite VBN cord-277909-rn1dow26 68 3 the the DT cord-277909-rn1dow26 68 4 flourescent flourescent NN cord-277909-rn1dow26 68 5 dye dye NN cord-277909-rn1dow26 68 6 transfers transfer NNS cord-277909-rn1dow26 68 7 energy energy NN cord-277909-rn1dow26 68 8 to to IN cord-277909-rn1dow26 68 9 the the DT cord-277909-rn1dow26 68 10 nearby nearby JJ cord-277909-rn1dow26 68 11 quenching quenching NN cord-277909-rn1dow26 68 12 dye dye NN cord-277909-rn1dow26 68 13 molecule molecule NN cord-277909-rn1dow26 68 14 rather rather RB cord-277909-rn1dow26 68 15 than than IN cord-277909-rn1dow26 68 16 fluorescing fluoresce VBG cord-277909-rn1dow26 68 17 , , , cord-277909-rn1dow26 68 18 resulting result VBG cord-277909-rn1dow26 68 19 in in IN cord-277909-rn1dow26 68 20 a a DT cord-277909-rn1dow26 68 21 non non JJ cord-277909-rn1dow26 68 22 - - JJ cord-277909-rn1dow26 68 23 fluorescent fluorescent JJ cord-277909-rn1dow26 68 24 probe probe NN cord-277909-rn1dow26 68 25 . . . cord-277909-rn1dow26 69 1 Dual dual JJ cord-277909-rn1dow26 69 2 labelled label VBN cord-277909-rn1dow26 69 3 probes probe NNS cord-277909-rn1dow26 69 4 are be VBP cord-277909-rn1dow26 69 5 designed design VBN cord-277909-rn1dow26 69 6 to to TO cord-277909-rn1dow26 69 7 hybridize hybridize VB cord-277909-rn1dow26 69 8 to to IN cord-277909-rn1dow26 69 9 an an DT cord-277909-rn1dow26 69 10 internal internal JJ cord-277909-rn1dow26 69 11 region region NN cord-277909-rn1dow26 69 12 of of IN cord-277909-rn1dow26 69 13 a a DT cord-277909-rn1dow26 69 14 PCR PCR NNP cord-277909-rn1dow26 69 15 product product NN cord-277909-rn1dow26 69 16 . . . cord-277909-rn1dow26 70 1 During during IN cord-277909-rn1dow26 70 2 PCR PCR NNP cord-277909-rn1dow26 70 3 , , , cord-277909-rn1dow26 70 4 when when WRB cord-277909-rn1dow26 70 5 the the DT cord-277909-rn1dow26 70 6 polymerase polymerase NN cord-277909-rn1dow26 70 7 replicates replicate VBZ cord-277909-rn1dow26 70 8 a a DT cord-277909-rn1dow26 70 9 template template NN cord-277909-rn1dow26 70 10 on on IN cord-277909-rn1dow26 70 11 which which WDT cord-277909-rn1dow26 70 12 the the DT cord-277909-rn1dow26 70 13 probe probe NN cord-277909-rn1dow26 70 14 is be VBZ cord-277909-rn1dow26 70 15 bound bind VBN cord-277909-rn1dow26 70 16 , , , cord-277909-rn1dow26 70 17 the the DT cord-277909-rn1dow26 70 18 5 5 CD cord-277909-rn1dow26 70 19 -exonuclease -exonuclease NN cord-277909-rn1dow26 70 20 activity activity NN cord-277909-rn1dow26 70 21 of of IN cord-277909-rn1dow26 70 22 the the DT cord-277909-rn1dow26 70 23 polymerase polymerase NN cord-277909-rn1dow26 70 24 cleaves cleave VBZ cord-277909-rn1dow26 70 25 the the DT cord-277909-rn1dow26 70 26 probe probe NN cord-277909-rn1dow26 70 27 . . . cord-277909-rn1dow26 71 1 This this DT cord-277909-rn1dow26 71 2 separates separate VBZ cord-277909-rn1dow26 71 3 the the DT cord-277909-rn1dow26 71 4 fluorescent fluorescent NN cord-277909-rn1dow26 71 5 and and CC cord-277909-rn1dow26 71 6 quenching quench VBG cord-277909-rn1dow26 71 7 dyes dye NNS cord-277909-rn1dow26 71 8 and and CC cord-277909-rn1dow26 71 9 FRET fret VB cord-277909-rn1dow26 71 10 no no RB cord-277909-rn1dow26 71 11 longer long RBR cord-277909-rn1dow26 71 12 occurs occur VBZ cord-277909-rn1dow26 71 13 , , , cord-277909-rn1dow26 71 14 allowing allow VBG cord-277909-rn1dow26 71 15 detection detection NN cord-277909-rn1dow26 71 16 of of IN cord-277909-rn1dow26 71 17 the the DT cord-277909-rn1dow26 71 18 signal signal NN cord-277909-rn1dow26 71 19 from from IN cord-277909-rn1dow26 71 20 the the DT cord-277909-rn1dow26 71 21 reporter reporter NN cord-277909-rn1dow26 71 22 dye dye NN cord-277909-rn1dow26 71 23 . . . cord-277909-rn1dow26 72 1 Fluorescence fluorescence NN cord-277909-rn1dow26 72 2 increases increase VBZ cord-277909-rn1dow26 72 3 in in IN cord-277909-rn1dow26 72 4 each each DT cord-277909-rn1dow26 72 5 cycle cycle NN cord-277909-rn1dow26 72 6 , , , cord-277909-rn1dow26 72 7 proportional proportional JJ cord-277909-rn1dow26 72 8 to to IN cord-277909-rn1dow26 72 9 the the DT cord-277909-rn1dow26 72 10 rate rate NN cord-277909-rn1dow26 72 11 of of IN cord-277909-rn1dow26 72 12 probe probe NN cord-277909-rn1dow26 72 13 cleavage cleavage NN cord-277909-rn1dow26 72 14 . . . cord-277909-rn1dow26 73 1 change change NN cord-277909-rn1dow26 73 2 in in IN cord-277909-rn1dow26 73 3 fluorescence fluorescence NN cord-277909-rn1dow26 73 4 ( ( -LRB- cord-277909-rn1dow26 73 5 R r NN cord-277909-rn1dow26 73 6 n n NN cord-277909-rn1dow26 73 7 ) ) -RRB- cord-277909-rn1dow26 73 8 produced produce VBN cord-277909-rn1dow26 73 9 during during IN cord-277909-rn1dow26 73 10 successful successful JJ cord-277909-rn1dow26 73 11 real real JJ cord-277909-rn1dow26 73 12 time time NN cord-277909-rn1dow26 73 13 PCR PCR NNP cord-277909-rn1dow26 73 14 . . . cord-277909-rn1dow26 74 1 We -PRON- PRP cord-277909-rn1dow26 74 2 have have VBP cord-277909-rn1dow26 74 3 found find VBN cord-277909-rn1dow26 74 4 in in IN cord-277909-rn1dow26 74 5 most most JJS cord-277909-rn1dow26 74 6 , , , cord-277909-rn1dow26 74 7 but but CC cord-277909-rn1dow26 74 8 not not RB cord-277909-rn1dow26 74 9 all all DT cord-277909-rn1dow26 74 10 cases case NNS cord-277909-rn1dow26 74 11 , , , cord-277909-rn1dow26 74 12 that that IN cord-277909-rn1dow26 74 13 dual dual JJ cord-277909-rn1dow26 74 14 labelled label VBN cord-277909-rn1dow26 74 15 probes probe NNS cord-277909-rn1dow26 74 16 produce produce VBP cord-277909-rn1dow26 74 17 a a DT cord-277909-rn1dow26 74 18 greater great JJR cord-277909-rn1dow26 74 19 fluorescent fluorescent NN cord-277909-rn1dow26 74 20 change change NN cord-277909-rn1dow26 74 21 than than IN cord-277909-rn1dow26 74 22 molecular molecular JJ cord-277909-rn1dow26 74 23 beacons beacon NNS cord-277909-rn1dow26 74 24 ( ( -LRB- cord-277909-rn1dow26 74 25 Fig Fig NNP cord-277909-rn1dow26 74 26 . . NNP cord-277909-rn1dow26 74 27 4 4 CD cord-277909-rn1dow26 74 28 ) ) -RRB- cord-277909-rn1dow26 74 29 . . . cord-277909-rn1dow26 75 1 A a DT cord-277909-rn1dow26 75 2 larger large JJR cord-277909-rn1dow26 75 3 R r NN cord-277909-rn1dow26 75 4 n n NN cord-277909-rn1dow26 75 5 allows allow VBZ cord-277909-rn1dow26 75 6 easier easy JJR cord-277909-rn1dow26 75 7 interpretation interpretation NN cord-277909-rn1dow26 75 8 of of IN cord-277909-rn1dow26 75 9 results result NNS cord-277909-rn1dow26 75 10 , , , cord-277909-rn1dow26 75 11 as as IN cord-277909-rn1dow26 75 12 low low JJ cord-277909-rn1dow26 75 13 positive positive JJ cord-277909-rn1dow26 75 14 results result NNS cord-277909-rn1dow26 75 15 maybe maybe RB cord-277909-rn1dow26 75 16 more more RBR cord-277909-rn1dow26 75 17 easily easily RB cord-277909-rn1dow26 75 18 differentiated differentiate VBN cord-277909-rn1dow26 75 19 from from IN cord-277909-rn1dow26 75 20 the the DT cord-277909-rn1dow26 75 21 variable variable JJ cord-277909-rn1dow26 75 22 background background NN cord-277909-rn1dow26 75 23 . . . cord-277909-rn1dow26 76 1 Dual dual JJ cord-277909-rn1dow26 76 2 labelled label VBN cord-277909-rn1dow26 76 3 probes probe NNS cord-277909-rn1dow26 76 4 provide provide VBP cord-277909-rn1dow26 76 5 a a DT cord-277909-rn1dow26 76 6 greater great JJR cord-277909-rn1dow26 76 7 fluorescent fluorescent NN cord-277909-rn1dow26 76 8 change change NN cord-277909-rn1dow26 76 9 as as IN cord-277909-rn1dow26 76 10 the the DT cord-277909-rn1dow26 76 11 reporter reporter NN cord-277909-rn1dow26 76 12 dye dye NN cord-277909-rn1dow26 76 13 is be VBZ cord-277909-rn1dow26 76 14 irreversibly irreversibly RB cord-277909-rn1dow26 76 15 released release VBN cord-277909-rn1dow26 76 16 from from IN cord-277909-rn1dow26 76 17 the the DT cord-277909-rn1dow26 76 18 quencher quencher NN cord-277909-rn1dow26 76 19 during during IN cord-277909-rn1dow26 76 20 the the DT cord-277909-rn1dow26 76 21 extension extension NN cord-277909-rn1dow26 76 22 stage stage NN cord-277909-rn1dow26 76 23 of of IN cord-277909-rn1dow26 76 24 each each DT cord-277909-rn1dow26 76 25 PCR PCR NNP cord-277909-rn1dow26 76 26 cycle cycle NN cord-277909-rn1dow26 76 27 . . . cord-277909-rn1dow26 77 1 Consequently consequently RB cord-277909-rn1dow26 77 2 there there EX cord-277909-rn1dow26 77 3 is be VBZ cord-277909-rn1dow26 77 4 a a DT cord-277909-rn1dow26 77 5 cumulative cumulative JJ cord-277909-rn1dow26 77 6 and and CC cord-277909-rn1dow26 77 7 permanent permanent JJ cord-277909-rn1dow26 77 8 record record NN cord-277909-rn1dow26 77 9 of of IN cord-277909-rn1dow26 77 10 successful successful JJ cord-277909-rn1dow26 77 11 amplification amplification NN cord-277909-rn1dow26 77 12 , , , cord-277909-rn1dow26 77 13 which which WDT cord-277909-rn1dow26 77 14 is be VBZ cord-277909-rn1dow26 77 15 added add VBN cord-277909-rn1dow26 77 16 to to IN cord-277909-rn1dow26 77 17 during during IN cord-277909-rn1dow26 77 18 subsequent subsequent JJ cord-277909-rn1dow26 77 19 PCR PCR NNP cord-277909-rn1dow26 77 20 cycles cycle NNS cord-277909-rn1dow26 77 21 . . . cord-277909-rn1dow26 78 1 Molecular molecular JJ cord-277909-rn1dow26 78 2 beacons beacon NNS cord-277909-rn1dow26 78 3 are be VBP cord-277909-rn1dow26 78 4 not not RB cord-277909-rn1dow26 78 5 destroyed destroy VBN cord-277909-rn1dow26 78 6 at at IN cord-277909-rn1dow26 78 7 the the DT cord-277909-rn1dow26 78 8 end end NN cord-277909-rn1dow26 78 9 of of IN cord-277909-rn1dow26 78 10 each each DT cord-277909-rn1dow26 78 11 cycle cycle NN cord-277909-rn1dow26 78 12 , , , cord-277909-rn1dow26 78 13 but but CC cord-277909-rn1dow26 78 14 return return VB cord-277909-rn1dow26 78 15 to to IN cord-277909-rn1dow26 78 16 free free JJ cord-277909-rn1dow26 78 17 solution solution NN cord-277909-rn1dow26 78 18 during during IN cord-277909-rn1dow26 78 19 the the DT cord-277909-rn1dow26 78 20 denaturation denaturation NN cord-277909-rn1dow26 78 21 phase phase NN cord-277909-rn1dow26 78 22 and and CC cord-277909-rn1dow26 78 23 revert revert VB cord-277909-rn1dow26 78 24 back back RB cord-277909-rn1dow26 78 25 to to IN cord-277909-rn1dow26 78 26 their -PRON- PRP$ cord-277909-rn1dow26 78 27 hairpin hairpin JJ cord-277909-rn1dow26 78 28 - - HYPH cord-277909-rn1dow26 78 29 loop loop NN cord-277909-rn1dow26 78 30 structure structure NN cord-277909-rn1dow26 78 31 . . . cord-277909-rn1dow26 79 1 Consequently consequently RB cord-277909-rn1dow26 79 2 there there EX cord-277909-rn1dow26 79 3 is be VBZ cord-277909-rn1dow26 79 4 no no DT cord-277909-rn1dow26 79 5 accumulation accumulation NN cord-277909-rn1dow26 79 6 of of IN cord-277909-rn1dow26 79 7 free free JJ cord-277909-rn1dow26 79 8 reporter reporter NN cord-277909-rn1dow26 79 9 dye dye NN cord-277909-rn1dow26 79 10 and and CC cord-277909-rn1dow26 79 11 the the DT cord-277909-rn1dow26 79 12 extra extra JJ cord-277909-rn1dow26 79 13 fluorescence fluorescence NN cord-277909-rn1dow26 79 14 produced produce VBN cord-277909-rn1dow26 79 15 is be VBZ cord-277909-rn1dow26 79 16 less less JJR cord-277909-rn1dow26 79 17 after after IN cord-277909-rn1dow26 79 18 each each DT cord-277909-rn1dow26 79 19 cycle cycle NN cord-277909-rn1dow26 79 20 than than IN cord-277909-rn1dow26 79 21 when when WRB cord-277909-rn1dow26 79 22 compared compare VBN cord-277909-rn1dow26 79 23 to to IN cord-277909-rn1dow26 79 24 dual dual JJ cord-277909-rn1dow26 79 25 labelled label VBN cord-277909-rn1dow26 79 26 probes probe NNS cord-277909-rn1dow26 79 27 . . . cord-277909-rn1dow26 80 1 Since since IN cord-277909-rn1dow26 80 2 real real JJ cord-277909-rn1dow26 80 3 time time NN cord-277909-rn1dow26 80 4 PCR PCR NNP cord-277909-rn1dow26 80 5 is be VBZ cord-277909-rn1dow26 80 6 a a DT cord-277909-rn1dow26 80 7 relatively relatively RB cord-277909-rn1dow26 80 8 new new JJ cord-277909-rn1dow26 80 9 technique technique NN cord-277909-rn1dow26 80 10 , , , cord-277909-rn1dow26 80 11 published publish VBN cord-277909-rn1dow26 80 12 assays assay NNS cord-277909-rn1dow26 80 13 may may MD cord-277909-rn1dow26 80 14 not not RB cord-277909-rn1dow26 80 15 be be VB cord-277909-rn1dow26 80 16 available available JJ cord-277909-rn1dow26 80 17 for for IN cord-277909-rn1dow26 80 18 all all DT cord-277909-rn1dow26 80 19 viral viral JJ cord-277909-rn1dow26 80 20 pathogens pathogen NNS cord-277909-rn1dow26 80 21 . . . cord-277909-rn1dow26 81 1 As as IN cord-277909-rn1dow26 81 2 a a DT cord-277909-rn1dow26 81 3 result result NN cord-277909-rn1dow26 81 4 many many JJ cord-277909-rn1dow26 81 5 laboratories laboratory NNS cord-277909-rn1dow26 81 6 may may MD cord-277909-rn1dow26 81 7 wish wish VB cord-277909-rn1dow26 81 8 to to TO cord-277909-rn1dow26 81 9 develop develop VB cord-277909-rn1dow26 81 10 novel novel NN cord-277909-rn1dow26 81 11 in in IN cord-277909-rn1dow26 81 12 - - HYPH cord-277909-rn1dow26 81 13 house house NN cord-277909-rn1dow26 81 14 real real JJ cord-277909-rn1dow26 81 15 time time NN cord-277909-rn1dow26 81 16 PCR PCR NNP cord-277909-rn1dow26 81 17 assays assay NNS cord-277909-rn1dow26 81 18 . . . cord-277909-rn1dow26 82 1 The the DT cord-277909-rn1dow26 82 2 initial initial JJ cord-277909-rn1dow26 82 3 stages stage NNS cord-277909-rn1dow26 82 4 in in IN cord-277909-rn1dow26 82 5 developing develop VBG cord-277909-rn1dow26 82 6 a a DT cord-277909-rn1dow26 82 7 real real JJ cord-277909-rn1dow26 82 8 time time NN cord-277909-rn1dow26 82 9 PCR pcr NN cord-277909-rn1dow26 82 10 assay assay NN cord-277909-rn1dow26 82 11 are be VBP cord-277909-rn1dow26 82 12 the the DT cord-277909-rn1dow26 82 13 same same JJ cord-277909-rn1dow26 82 14 as as IN cord-277909-rn1dow26 82 15 those those DT cord-277909-rn1dow26 82 16 required require VBN cord-277909-rn1dow26 82 17 for for IN cord-277909-rn1dow26 82 18 designing design VBG cord-277909-rn1dow26 82 19 traditional traditional JJ cord-277909-rn1dow26 82 20 gel gel NN cord-277909-rn1dow26 82 21 based base VBN cord-277909-rn1dow26 82 22 PCR PCR NNP cord-277909-rn1dow26 82 23 tests test NNS cord-277909-rn1dow26 82 24 . . . cord-277909-rn1dow26 83 1 The the DT cord-277909-rn1dow26 83 2 first first JJ cord-277909-rn1dow26 83 3 step step NN cord-277909-rn1dow26 83 4 is be VBZ cord-277909-rn1dow26 83 5 to to TO cord-277909-rn1dow26 83 6 identify identify VB cord-277909-rn1dow26 83 7 a a DT cord-277909-rn1dow26 83 8 conserved conserved JJ cord-277909-rn1dow26 83 9 region region NN cord-277909-rn1dow26 83 10 of of IN cord-277909-rn1dow26 83 11 the the DT cord-277909-rn1dow26 83 12 viral viral NN cord-277909-rn1dow26 83 13 ( ( -LRB- cord-277909-rn1dow26 83 14 or or CC cord-277909-rn1dow26 83 15 other other JJ cord-277909-rn1dow26 83 16 pathogen pathogen NN cord-277909-rn1dow26 83 17 ) ) -RRB- cord-277909-rn1dow26 83 18 genome genome NN cord-277909-rn1dow26 83 19 in in IN cord-277909-rn1dow26 83 20 which which WDT cord-277909-rn1dow26 83 21 to to TO cord-277909-rn1dow26 83 22 design design VB cord-277909-rn1dow26 83 23 the the DT cord-277909-rn1dow26 83 24 assay assay NN cord-277909-rn1dow26 83 25 . . . cord-277909-rn1dow26 84 1 A a DT cord-277909-rn1dow26 84 2 literature literature NN cord-277909-rn1dow26 84 3 review review NN cord-277909-rn1dow26 84 4 will will MD cord-277909-rn1dow26 84 5 often often RB cord-277909-rn1dow26 84 6 reveal reveal VB cord-277909-rn1dow26 84 7 which which WDT cord-277909-rn1dow26 84 8 genes gene NNS cord-277909-rn1dow26 84 9 are be VBP cord-277909-rn1dow26 84 10 conserved conserve VBN cord-277909-rn1dow26 84 11 , , , cord-277909-rn1dow26 84 12 and and CC cord-277909-rn1dow26 84 13 most most RBS cord-277909-rn1dow26 84 14 often often RB cord-277909-rn1dow26 84 15 these these DT cord-277909-rn1dow26 84 16 will will MD cord-277909-rn1dow26 84 17 be be VB cord-277909-rn1dow26 84 18 genes gene NNS cord-277909-rn1dow26 84 19 encoding encode VBG cord-277909-rn1dow26 84 20 nonimmunogenic nonimmunogenic NNP cord-277909-rn1dow26 84 21 proteins protein NNS cord-277909-rn1dow26 84 22 . . . cord-277909-rn1dow26 85 1 Once once RB cord-277909-rn1dow26 85 2 a a DT cord-277909-rn1dow26 85 3 gene gene NN cord-277909-rn1dow26 85 4 is be VBZ cord-277909-rn1dow26 85 5 identified identify VBN cord-277909-rn1dow26 85 6 , , , cord-277909-rn1dow26 85 7 a a DT cord-277909-rn1dow26 85 8 BLAST blast NN cord-277909-rn1dow26 85 9 search search NN cord-277909-rn1dow26 85 10 ( ( -LRB- cord-277909-rn1dow26 85 11 http://www.ncbi.nlm.nih.gov/BLAST/ http://www.ncbi.nlm.nih.gov/BLAST/ NNP cord-277909-rn1dow26 85 12 ) ) -RRB- cord-277909-rn1dow26 85 13 is be VBZ cord-277909-rn1dow26 85 14 performed perform VBN cord-277909-rn1dow26 85 15 to to TO cord-277909-rn1dow26 85 16 locate locate VB cord-277909-rn1dow26 85 17 the the DT cord-277909-rn1dow26 85 18 most most RBS cord-277909-rn1dow26 85 19 conserved conserved JJ cord-277909-rn1dow26 85 20 regions region NNS cord-277909-rn1dow26 85 21 within within IN cord-277909-rn1dow26 85 22 this this DT cord-277909-rn1dow26 85 23 gene gene NN cord-277909-rn1dow26 85 24 . . . cord-277909-rn1dow26 86 1 As as IN cord-277909-rn1dow26 86 2 real real JJ cord-277909-rn1dow26 86 3 time time NN cord-277909-rn1dow26 86 4 amplicons amplicon NNS cord-277909-rn1dow26 86 5 are be VBP cord-277909-rn1dow26 86 6 short short JJ cord-277909-rn1dow26 86 7 and and CC cord-277909-rn1dow26 86 8 contain contain VBP cord-277909-rn1dow26 86 9 a a DT cord-277909-rn1dow26 86 10 third third JJ cord-277909-rn1dow26 86 11 oligonucleotide oligonucleotide NN cord-277909-rn1dow26 86 12 ( ( -LRB- cord-277909-rn1dow26 86 13 i.e. i.e. FW cord-277909-rn1dow26 86 14 , , , cord-277909-rn1dow26 86 15 the the DT cord-277909-rn1dow26 86 16 probe probe NN cord-277909-rn1dow26 86 17 ) ) -RRB- cord-277909-rn1dow26 86 18 , , , cord-277909-rn1dow26 86 19 the the DT cord-277909-rn1dow26 86 20 ideal ideal JJ cord-277909-rn1dow26 86 21 region region NN cord-277909-rn1dow26 86 22 to to TO cord-277909-rn1dow26 86 23 design design VB cord-277909-rn1dow26 86 24 an an DT cord-277909-rn1dow26 86 25 assay assay NN cord-277909-rn1dow26 86 26 would would MD cord-277909-rn1dow26 86 27 be be VB cord-277909-rn1dow26 86 28 100 100 CD cord-277909-rn1dow26 86 29 - - SYM cord-277909-rn1dow26 86 30 150 150 CD cord-277909-rn1dow26 86 31 nucleotides nucleotide NNS cord-277909-rn1dow26 86 32 long long JJ cord-277909-rn1dow26 86 33 with with IN cord-277909-rn1dow26 86 34 3 3 CD cord-277909-rn1dow26 86 35 regions region NNS cord-277909-rn1dow26 86 36 of of IN cord-277909-rn1dow26 86 37 30 30 CD cord-277909-rn1dow26 86 38 bases basis NNS cord-277909-rn1dow26 86 39 devoid devoid JJ cord-277909-rn1dow26 86 40 of of IN cord-277909-rn1dow26 86 41 all all DT cord-277909-rn1dow26 86 42 base base NN cord-277909-rn1dow26 86 43 degeneracies degeneracy NNS cord-277909-rn1dow26 86 44 . . . cord-277909-rn1dow26 87 1 It -PRON- PRP cord-277909-rn1dow26 87 2 is be VBZ cord-277909-rn1dow26 87 3 best good JJS cord-277909-rn1dow26 87 4 to to TO cord-277909-rn1dow26 87 5 find find VB cord-277909-rn1dow26 87 6 a a DT cord-277909-rn1dow26 87 7 conserved conserved JJ cord-277909-rn1dow26 87 8 region region NN cord-277909-rn1dow26 87 9 of of IN cord-277909-rn1dow26 87 10 400 400 CD cord-277909-rn1dow26 87 11 - - SYM cord-277909-rn1dow26 87 12 500 500 CD cord-277909-rn1dow26 87 13 bases basis NNS cord-277909-rn1dow26 87 14 to to TO cord-277909-rn1dow26 87 15 allow allow VB cord-277909-rn1dow26 87 16 the the DT cord-277909-rn1dow26 87 17 software software NN cord-277909-rn1dow26 87 18 to to TO cord-277909-rn1dow26 87 19 identify identify VB cord-277909-rn1dow26 87 20 a a DT cord-277909-rn1dow26 87 21 number number NN cord-277909-rn1dow26 87 22 of of IN cord-277909-rn1dow26 87 23 potential potential JJ cord-277909-rn1dow26 87 24 assays assay NNS cord-277909-rn1dow26 87 25 . . . cord-277909-rn1dow26 88 1 Several several JJ cord-277909-rn1dow26 88 2 software software NN cord-277909-rn1dow26 88 3 programs program NNS cord-277909-rn1dow26 88 4 are be VBP cord-277909-rn1dow26 88 5 available available JJ cord-277909-rn1dow26 88 6 to to TO cord-277909-rn1dow26 88 7 design design VB cord-277909-rn1dow26 88 8 real real JJ cord-277909-rn1dow26 88 9 time time NN cord-277909-rn1dow26 88 10 assays assay NNS cord-277909-rn1dow26 88 11 , , , cord-277909-rn1dow26 88 12 and and CC cord-277909-rn1dow26 88 13 often often RB cord-277909-rn1dow26 88 14 software software NN cord-277909-rn1dow26 88 15 is be VBZ cord-277909-rn1dow26 88 16 provided provide VBN cord-277909-rn1dow26 88 17 by by IN cord-277909-rn1dow26 88 18 the the DT cord-277909-rn1dow26 88 19 instrument instrument NN cord-277909-rn1dow26 88 20 supplier supplier NN cord-277909-rn1dow26 88 21 . . . cord-277909-rn1dow26 89 1 Beacon Beacon NNP cord-277909-rn1dow26 89 2 Designer Designer NNP cord-277909-rn1dow26 89 3 ( ( -LRB- cord-277909-rn1dow26 90 1 Pre- Pre- NNP cord-277909-rn1dow26 90 2 Fig Fig NNP cord-277909-rn1dow26 90 3 . . . cord-277909-rn1dow26 91 1 4 4 LS cord-277909-rn1dow26 91 2 . . . cord-277909-rn1dow26 92 1 Comparison comparison NN cord-277909-rn1dow26 92 2 of of IN cord-277909-rn1dow26 92 3 the the DT cord-277909-rn1dow26 92 4 R r NN cord-277909-rn1dow26 92 5 n n NN cord-277909-rn1dow26 92 6 produced produce VBD cord-277909-rn1dow26 92 7 when when WRB cord-277909-rn1dow26 92 8 using use VBG cord-277909-rn1dow26 92 9 dual dual JJ cord-277909-rn1dow26 92 10 labelled label VBN cord-277909-rn1dow26 92 11 probes probe NNS cord-277909-rn1dow26 92 12 ( ( -LRB- cord-277909-rn1dow26 92 13 A a NN cord-277909-rn1dow26 92 14 ) ) -RRB- cord-277909-rn1dow26 92 15 vs. vs. FW cord-277909-rn1dow26 92 16 molecular molecular JJ cord-277909-rn1dow26 92 17 beacons beacon NNS cord-277909-rn1dow26 92 18 ( ( -LRB- cord-277909-rn1dow26 92 19 B b NN cord-277909-rn1dow26 92 20 ) ) -RRB- cord-277909-rn1dow26 92 21 . . . cord-277909-rn1dow26 93 1 Table table NN cord-277909-rn1dow26 93 2 2 2 CD cord-277909-rn1dow26 94 1 Main main JJ cord-277909-rn1dow26 94 2 factors factor NNS cord-277909-rn1dow26 94 3 to to TO cord-277909-rn1dow26 94 4 consider consider VB cord-277909-rn1dow26 94 5 when when WRB cord-277909-rn1dow26 94 6 developing develop VBG cord-277909-rn1dow26 94 7 a a DT cord-277909-rn1dow26 94 8 dual dual JJ cord-277909-rn1dow26 94 9 labelled label VBN cord-277909-rn1dow26 94 10 probe probe NN cord-277909-rn1dow26 94 11 PCR pcr NN cord-277909-rn1dow26 94 12 assay assay NN cord-277909-rn1dow26 94 13 Factors factor NNS cord-277909-rn1dow26 94 14 to to TO cord-277909-rn1dow26 94 15 consider consider VB cord-277909-rn1dow26 94 16 when when WRB cord-277909-rn1dow26 94 17 developing develop VBG cord-277909-rn1dow26 94 18 a a DT cord-277909-rn1dow26 94 19 dual dual JJ cord-277909-rn1dow26 94 20 labelled label VBN cord-277909-rn1dow26 94 21 probe probe NN cord-277909-rn1dow26 94 22 PCR pcr NN cord-277909-rn1dow26 94 23 assay assay NN cord-277909-rn1dow26 94 24 Identify identify VB cord-277909-rn1dow26 94 25 a a DT cord-277909-rn1dow26 94 26 conserved conserved JJ cord-277909-rn1dow26 94 27 region region NN cord-277909-rn1dow26 94 28 of of IN cord-277909-rn1dow26 94 29 the the DT cord-277909-rn1dow26 94 30 viral viral NN cord-277909-rn1dow26 94 31 ( ( -LRB- cord-277909-rn1dow26 94 32 or or CC cord-277909-rn1dow26 94 33 other other JJ cord-277909-rn1dow26 94 34 pathogen pathogen NN cord-277909-rn1dow26 94 35 ) ) -RRB- cord-277909-rn1dow26 94 36 genome genome NN cord-277909-rn1dow26 94 37 Identify identify VB cord-277909-rn1dow26 94 38 a a DT cord-277909-rn1dow26 94 39 region region NN cord-277909-rn1dow26 94 40 within within IN cord-277909-rn1dow26 94 41 this this DT cord-277909-rn1dow26 94 42 area area NN cord-277909-rn1dow26 94 43 of of IN cord-277909-rn1dow26 94 44 ∼400 ∼400 NNP cord-277909-rn1dow26 94 45 - - HYPH cord-277909-rn1dow26 94 46 500 500 CD cord-277909-rn1dow26 94 47 bases basis NNS cord-277909-rn1dow26 94 48 in in IN cord-277909-rn1dow26 94 49 length length NN cord-277909-rn1dow26 94 50 Check check NN cord-277909-rn1dow26 94 51 that that IN cord-277909-rn1dow26 94 52 the the DT cord-277909-rn1dow26 94 53 probe probe NN cord-277909-rn1dow26 94 54 sequence sequence NN cord-277909-rn1dow26 94 55 contains contain VBZ cord-277909-rn1dow26 94 56 more more JJR cord-277909-rn1dow26 94 57 C c NN cord-277909-rn1dow26 94 58 residues residue NNS cord-277909-rn1dow26 94 59 than than IN cord-277909-rn1dow26 94 60 G g NN cord-277909-rn1dow26 94 61 residues residue NNS cord-277909-rn1dow26 94 62 Ensure ensure VBP cord-277909-rn1dow26 94 63 that that IN cord-277909-rn1dow26 94 64 the the DT cord-277909-rn1dow26 94 65 probe probe NN cord-277909-rn1dow26 94 66 does do VBZ cord-277909-rn1dow26 94 67 not not RB cord-277909-rn1dow26 94 68 begin begin VB cord-277909-rn1dow26 94 69 with with IN cord-277909-rn1dow26 94 70 a a DT cord-277909-rn1dow26 94 71 G g NN cord-277909-rn1dow26 95 1 The the DT cord-277909-rn1dow26 95 2 optimal optimal NN cord-277909-rn1dow26 96 1 primer primer NNP cord-277909-rn1dow26 96 2 T T NNP cord-277909-rn1dow26 96 3 m m NN cord-277909-rn1dow26 96 4 values value NNS cord-277909-rn1dow26 96 5 are be VBP cord-277909-rn1dow26 96 6 58 58 CD cord-277909-rn1dow26 97 1 -60 -60 NNS cord-277909-rn1dow26 97 2 • • NN cord-277909-rn1dow26 97 3 C c NN cord-277909-rn1dow26 98 1 The the DT cord-277909-rn1dow26 98 2 optimal optimal JJ cord-277909-rn1dow26 98 3 probe probe NN cord-277909-rn1dow26 98 4 T T NNP cord-277909-rn1dow26 98 5 m m NN cord-277909-rn1dow26 98 6 should should MD cord-277909-rn1dow26 98 7 be be VB cord-277909-rn1dow26 99 1 ∼10 ∼10 NNP cord-277909-rn1dow26 99 2 • • NNP cord-277909-rn1dow26 99 3 C C NNP cord-277909-rn1dow26 99 4 higher higher RBR cord-277909-rn1dow26 100 1 The the DT cord-277909-rn1dow26 100 2 amplicon amplicon NN cord-277909-rn1dow26 100 3 should should MD cord-277909-rn1dow26 100 4 not not RB cord-277909-rn1dow26 100 5 exceed exceed VB cord-277909-rn1dow26 100 6 150 150 CD cord-277909-rn1dow26 100 7 bp bp NNS cord-277909-rn1dow26 100 8 in in IN cord-277909-rn1dow26 100 9 length length NN cord-277909-rn1dow26 101 1 Primers primer NNS cord-277909-rn1dow26 101 2 should should MD cord-277909-rn1dow26 101 3 not not RB cord-277909-rn1dow26 101 4 contain contain VB cord-277909-rn1dow26 101 5 more more JJR cord-277909-rn1dow26 101 6 than than IN cord-277909-rn1dow26 101 7 2/5 2/5 CD cord-277909-rn1dow26 101 8 G g NN cord-277909-rn1dow26 101 9 or or CC cord-277909-rn1dow26 101 10 C c NN cord-277909-rn1dow26 101 11 residues residue NNS cord-277909-rn1dow26 101 12 at at IN cord-277909-rn1dow26 101 13 the the DT cord-277909-rn1dow26 101 14 3 3 CD cord-277909-rn1dow26 101 15 Check check VB cord-277909-rn1dow26 101 16 the the DT cord-277909-rn1dow26 101 17 amplicon amplicon NN cord-277909-rn1dow26 101 18 for for IN cord-277909-rn1dow26 101 19 secondary secondary JJ cord-277909-rn1dow26 101 20 structure structure NN cord-277909-rn1dow26 101 21 , , , cord-277909-rn1dow26 101 22 and and CC cord-277909-rn1dow26 101 23 for for IN cord-277909-rn1dow26 101 24 specificity specificity NN cord-277909-rn1dow26 101 25 mier mier NNP cord-277909-rn1dow26 101 26 Biosoft Biosoft NNP cord-277909-rn1dow26 101 27 ) ) -RRB- cord-277909-rn1dow26 101 28 can can MD cord-277909-rn1dow26 101 29 be be VB cord-277909-rn1dow26 101 30 used use VBN cord-277909-rn1dow26 101 31 to to TO cord-277909-rn1dow26 101 32 design design VB cord-277909-rn1dow26 101 33 either either DT cord-277909-rn1dow26 101 34 molecular molecular JJ cord-277909-rn1dow26 101 35 beacon beacon NN cord-277909-rn1dow26 101 36 assays assay NNS cord-277909-rn1dow26 101 37 or or CC cord-277909-rn1dow26 101 38 dual dual JJ cord-277909-rn1dow26 101 39 labelled label VBN cord-277909-rn1dow26 101 40 probe probe NN cord-277909-rn1dow26 101 41 based base VBN cord-277909-rn1dow26 101 42 assays assay NNS cord-277909-rn1dow26 101 43 , , , cord-277909-rn1dow26 101 44 and and CC cord-277909-rn1dow26 101 45 has have VBZ cord-277909-rn1dow26 101 46 additional additional JJ cord-277909-rn1dow26 101 47 functionality functionality NN cord-277909-rn1dow26 101 48 such such JJ cord-277909-rn1dow26 101 49 as as IN cord-277909-rn1dow26 101 50 BLAST blast NN cord-277909-rn1dow26 101 51 and and CC cord-277909-rn1dow26 101 52 secondary secondary JJ cord-277909-rn1dow26 101 53 structure structure NN cord-277909-rn1dow26 101 54 searching search VBG cord-277909-rn1dow26 101 55 . . . cord-277909-rn1dow26 102 1 Primer Primer NNP cord-277909-rn1dow26 102 2 Express Express NNP cord-277909-rn1dow26 102 3 ( ( -LRB- cord-277909-rn1dow26 102 4 Applied Applied NNP cord-277909-rn1dow26 102 5 Biosystems Biosystems NNP cord-277909-rn1dow26 102 6 ) ) -RRB- cord-277909-rn1dow26 102 7 is be VBZ cord-277909-rn1dow26 102 8 another another DT cord-277909-rn1dow26 102 9 useful useful JJ cord-277909-rn1dow26 102 10 tool tool NN cord-277909-rn1dow26 102 11 for for IN cord-277909-rn1dow26 102 12 designing design VBG cord-277909-rn1dow26 102 13 Taqman Taqman NNP cord-277909-rn1dow26 102 14 based base VBN cord-277909-rn1dow26 102 15 assays assay NNS cord-277909-rn1dow26 102 16 , , , cord-277909-rn1dow26 102 17 and and CC cord-277909-rn1dow26 102 18 is be VBZ cord-277909-rn1dow26 102 19 the the DT cord-277909-rn1dow26 102 20 only only JJ cord-277909-rn1dow26 102 21 software software NN cord-277909-rn1dow26 102 22 currently currently RB cord-277909-rn1dow26 102 23 available available JJ cord-277909-rn1dow26 102 24 for for IN cord-277909-rn1dow26 102 25 designing design VBG cord-277909-rn1dow26 102 26 assays assay NNS cord-277909-rn1dow26 102 27 based base VBN cord-277909-rn1dow26 102 28 on on IN cord-277909-rn1dow26 102 29 Applied Applied NNP cord-277909-rn1dow26 102 30 Biosystems Biosystems NNP cord-277909-rn1dow26 102 31 ( ( -LRB- cord-277909-rn1dow26 102 32 ABI ABI NNP cord-277909-rn1dow26 102 33 ) ) -RRB- cord-277909-rn1dow26 102 34 MGB MGB NNP cord-277909-rn1dow26 102 35 probes probe NNS cord-277909-rn1dow26 102 36 . . . cord-277909-rn1dow26 103 1 Once once IN cord-277909-rn1dow26 103 2 the the DT cord-277909-rn1dow26 103 3 software software NN cord-277909-rn1dow26 103 4 has have VBZ cord-277909-rn1dow26 103 5 suggested suggest VBN cord-277909-rn1dow26 103 6 a a DT cord-277909-rn1dow26 103 7 primer primer NN cord-277909-rn1dow26 103 8 and and CC cord-277909-rn1dow26 103 9 probe probe NN cord-277909-rn1dow26 103 10 set set VBD cord-277909-rn1dow26 103 11 , , , cord-277909-rn1dow26 103 12 it -PRON- PRP cord-277909-rn1dow26 103 13 is be VBZ cord-277909-rn1dow26 103 14 important important JJ cord-277909-rn1dow26 103 15 to to TO cord-277909-rn1dow26 103 16 ensure ensure VB cord-277909-rn1dow26 103 17 that that IN cord-277909-rn1dow26 103 18 they -PRON- PRP cord-277909-rn1dow26 103 19 meet meet VBP cord-277909-rn1dow26 103 20 the the DT cord-277909-rn1dow26 103 21 criteria criterion NNS cord-277909-rn1dow26 103 22 ( ( -LRB- cord-277909-rn1dow26 103 23 Table table NN cord-277909-rn1dow26 103 24 2 2 CD cord-277909-rn1dow26 103 25 ) ) -RRB- cord-277909-rn1dow26 103 26 . . . cord-277909-rn1dow26 104 1 Assuming assume VBG cord-277909-rn1dow26 104 2 the the DT cord-277909-rn1dow26 104 3 primers primer NNS cord-277909-rn1dow26 104 4 and and CC cord-277909-rn1dow26 104 5 probe probe NN cord-277909-rn1dow26 104 6 meet meet VB cord-277909-rn1dow26 104 7 these these DT cord-277909-rn1dow26 104 8 criteria criterion NNS cord-277909-rn1dow26 104 9 , , , cord-277909-rn1dow26 104 10 it -PRON- PRP cord-277909-rn1dow26 104 11 is be VBZ cord-277909-rn1dow26 104 12 advisable advisable JJ cord-277909-rn1dow26 104 13 to to TO cord-277909-rn1dow26 104 14 check check VB cord-277909-rn1dow26 104 15 the the DT cord-277909-rn1dow26 104 16 amplicon amplicon NN cord-277909-rn1dow26 104 17 for for IN cord-277909-rn1dow26 104 18 secondary secondary JJ cord-277909-rn1dow26 104 19 structure structure NN cord-277909-rn1dow26 104 20 , , , cord-277909-rn1dow26 104 21 and and CC cord-277909-rn1dow26 104 22 for for IN cord-277909-rn1dow26 104 23 specificity specificity NN cord-277909-rn1dow26 104 24 . . . cord-277909-rn1dow26 105 1 Secondary secondary JJ cord-277909-rn1dow26 105 2 structure structure NN cord-277909-rn1dow26 105 3 prediction prediction NN cord-277909-rn1dow26 105 4 software software NN cord-277909-rn1dow26 105 5 is be VBZ cord-277909-rn1dow26 105 6 available available JJ cord-277909-rn1dow26 105 7 on on IN cord-277909-rn1dow26 105 8 the the DT cord-277909-rn1dow26 105 9 internet internet NN cord-277909-rn1dow26 105 10 , , , cord-277909-rn1dow26 105 11 for for IN cord-277909-rn1dow26 105 12 example example NN cord-277909-rn1dow26 105 13 , , , cord-277909-rn1dow26 105 14 Michael Michael NNP cord-277909-rn1dow26 105 15 Zukers Zukers NNP cord-277909-rn1dow26 105 16 ' ' POS cord-277909-rn1dow26 105 17 m m NN cord-277909-rn1dow26 105 18 - - JJ cord-277909-rn1dow26 105 19 fold fold JJ cord-277909-rn1dow26 105 20 server server NN cord-277909-rn1dow26 105 21 ( ( -LRB- cord-277909-rn1dow26 105 22 http://www.bioinfo.rpi.edu/∼zukerm/rna/ http://www.bioinfo.rpi.edu/∼zukerm/rna/ NNP cord-277909-rn1dow26 105 23 ) ) -RRB- cord-277909-rn1dow26 105 24 is be VBZ cord-277909-rn1dow26 105 25 particularly particularly RB cord-277909-rn1dow26 105 26 useful useful JJ cord-277909-rn1dow26 105 27 . . . cord-277909-rn1dow26 106 1 A a DT cord-277909-rn1dow26 106 2 highly highly RB cord-277909-rn1dow26 106 3 structured structured JJ cord-277909-rn1dow26 106 4 amplicon amplicon NN cord-277909-rn1dow26 106 5 ( ( -LRB- cord-277909-rn1dow26 106 6 higher high JJR cord-277909-rn1dow26 106 7 − − CD cord-277909-rn1dow26 106 8 G g NN cord-277909-rn1dow26 106 9 ) ) -RRB- cord-277909-rn1dow26 106 10 may may MD cord-277909-rn1dow26 106 11 reduce reduce VB cord-277909-rn1dow26 106 12 the the DT cord-277909-rn1dow26 106 13 efficiency efficiency NN cord-277909-rn1dow26 106 14 of of IN cord-277909-rn1dow26 106 15 reverse reverse JJ cord-277909-rn1dow26 106 16 transcription transcription NN cord-277909-rn1dow26 106 17 or or CC cord-277909-rn1dow26 106 18 primer primer NN cord-277909-rn1dow26 106 19 annealing annealing NN cord-277909-rn1dow26 106 20 ( ( -LRB- cord-277909-rn1dow26 106 21 Fig Fig NNP cord-277909-rn1dow26 106 22 . . . cord-277909-rn1dow26 106 23 5 5 CD cord-277909-rn1dow26 106 24 ) ) -RRB- cord-277909-rn1dow26 106 25 . . . cord-277909-rn1dow26 107 1 This this DT cord-277909-rn1dow26 107 2 may may MD cord-277909-rn1dow26 107 3 reduce reduce VB cord-277909-rn1dow26 107 4 the the DT cord-277909-rn1dow26 107 5 overall overall JJ cord-277909-rn1dow26 107 6 sensitivity sensitivity NN cord-277909-rn1dow26 107 7 of of IN cord-277909-rn1dow26 107 8 the the DT cord-277909-rn1dow26 107 9 assay assay NN cord-277909-rn1dow26 107 10 . . . cord-277909-rn1dow26 108 1 The the DT cord-277909-rn1dow26 108 2 final final JJ cord-277909-rn1dow26 108 3 stage stage NN cord-277909-rn1dow26 108 4 of of IN cord-277909-rn1dow26 108 5 the the DT cord-277909-rn1dow26 108 6 design design NN cord-277909-rn1dow26 108 7 process process NN cord-277909-rn1dow26 108 8 is be VBZ cord-277909-rn1dow26 108 9 to to TO cord-277909-rn1dow26 108 10 check check VB cord-277909-rn1dow26 108 11 the the DT cord-277909-rn1dow26 108 12 amplicon amplicon NN cord-277909-rn1dow26 108 13 for for IN cord-277909-rn1dow26 108 14 specificity specificity NN cord-277909-rn1dow26 108 15 using use VBG cord-277909-rn1dow26 108 16 the the DT cord-277909-rn1dow26 108 17 BLAST blast NN cord-277909-rn1dow26 108 18 algorithm algorithm NN cord-277909-rn1dow26 108 19 ( ( -LRB- cord-277909-rn1dow26 108 20 http://www.ncbi.nlm.nih.gov/BLAST/ http://www.ncbi.nlm.nih.gov/BLAST/ NNP cord-277909-rn1dow26 108 21 ) ) -RRB- cord-277909-rn1dow26 108 22 . . . cord-277909-rn1dow26 109 1 The the DT cord-277909-rn1dow26 109 2 assay assay NN cord-277909-rn1dow26 109 3 should should MD cord-277909-rn1dow26 109 4 be be VB cord-277909-rn1dow26 109 5 specific specific JJ cord-277909-rn1dow26 109 6 for for IN cord-277909-rn1dow26 109 7 the the DT cord-277909-rn1dow26 109 8 sequence sequence NN cord-277909-rn1dow26 109 9 / / SYM cord-277909-rn1dow26 109 10 organism organism NN cord-277909-rn1dow26 109 11 of of IN cord-277909-rn1dow26 109 12 interest interest NN cord-277909-rn1dow26 109 13 , , , cord-277909-rn1dow26 109 14 and and CC cord-277909-rn1dow26 109 15 should should MD cord-277909-rn1dow26 109 16 not not RB cord-277909-rn1dow26 109 17 detect detect VB cord-277909-rn1dow26 109 18 other other JJ cord-277909-rn1dow26 109 19 sequences sequence NNS cord-277909-rn1dow26 109 20 . . . cord-277909-rn1dow26 110 1 Non non JJ cord-277909-rn1dow26 110 2 - - JJ cord-277909-rn1dow26 110 3 specific specific JJ cord-277909-rn1dow26 110 4 matches match NNS cord-277909-rn1dow26 110 5 may may MD cord-277909-rn1dow26 110 6 be be VB cord-277909-rn1dow26 110 7 picked pick VBN cord-277909-rn1dow26 110 8 up up RP cord-277909-rn1dow26 110 9 , , , cord-277909-rn1dow26 110 10 but but CC cord-277909-rn1dow26 110 11 closer close JJR cord-277909-rn1dow26 110 12 analysis analysis NN cord-277909-rn1dow26 110 13 of of IN cord-277909-rn1dow26 110 14 the the DT cord-277909-rn1dow26 110 15 primer primer NN cord-277909-rn1dow26 110 16 and and CC cord-277909-rn1dow26 110 17 probe probe VB cord-277909-rn1dow26 110 18 binding bind VBG cord-277909-rn1dow26 110 19 sites site NNS cord-277909-rn1dow26 110 20 often often RB cord-277909-rn1dow26 110 21 confirms confirm VBZ cord-277909-rn1dow26 110 22 that that IN cord-277909-rn1dow26 110 23 these these DT cord-277909-rn1dow26 110 24 sequences sequence NNS cord-277909-rn1dow26 110 25 will will MD cord-277909-rn1dow26 110 26 not not RB cord-277909-rn1dow26 110 27 be be VB cord-277909-rn1dow26 110 28 amplified amplify VBN cord-277909-rn1dow26 110 29 or or CC cord-277909-rn1dow26 110 30 detected detect VBN cord-277909-rn1dow26 110 31 due due IN cord-277909-rn1dow26 110 32 to to IN cord-277909-rn1dow26 110 33 multiple multiple JJ cord-277909-rn1dow26 110 34 base base NN cord-277909-rn1dow26 110 35 changes change NNS cord-277909-rn1dow26 110 36 . . . cord-277909-rn1dow26 111 1 When when WRB cord-277909-rn1dow26 111 2 performing perform VBG cord-277909-rn1dow26 111 3 gel gel NN cord-277909-rn1dow26 111 4 based base VBN cord-277909-rn1dow26 111 5 PCR PCR NNP cord-277909-rn1dow26 111 6 it -PRON- PRP cord-277909-rn1dow26 111 7 is be VBZ cord-277909-rn1dow26 111 8 essential essential JJ cord-277909-rn1dow26 111 9 to to TO cord-277909-rn1dow26 111 10 fully fully RB cord-277909-rn1dow26 111 11 optimise optimise VB cord-277909-rn1dow26 111 12 primer primer NN cord-277909-rn1dow26 111 13 concentrations concentration NNS cord-277909-rn1dow26 111 14 to to TO cord-277909-rn1dow26 111 15 achieve achieve VB cord-277909-rn1dow26 111 16 the the DT cord-277909-rn1dow26 111 17 best good JJS cord-277909-rn1dow26 111 18 sensitivity sensitivity NN cord-277909-rn1dow26 111 19 of of IN cord-277909-rn1dow26 111 20 the the DT cord-277909-rn1dow26 111 21 assay assay NN cord-277909-rn1dow26 111 22 and and CC cord-277909-rn1dow26 111 23 best good JJS cord-277909-rn1dow26 111 24 end end NN cord-277909-rn1dow26 111 25 - - HYPH cord-277909-rn1dow26 111 26 point point NN cord-277909-rn1dow26 111 27 signal signal NN cord-277909-rn1dow26 111 28 ( ( -LRB- cord-277909-rn1dow26 111 29 brightness brightness NN cord-277909-rn1dow26 111 30 of of IN cord-277909-rn1dow26 111 31 band band NN cord-277909-rn1dow26 111 32 ) ) -RRB- cord-277909-rn1dow26 112 1 ( ( -LRB- cord-277909-rn1dow26 112 2 Gunson Gunson NNP cord-277909-rn1dow26 112 3 et et FW cord-277909-rn1dow26 112 4 al al NNP cord-277909-rn1dow26 112 5 . . NNP cord-277909-rn1dow26 112 6 , , , cord-277909-rn1dow26 112 7 2003 2003 CD cord-277909-rn1dow26 112 8 ) ) -RRB- cord-277909-rn1dow26 112 9 . . . cord-277909-rn1dow26 113 1 In in IN cord-277909-rn1dow26 113 2 real real JJ cord-277909-rn1dow26 113 3 time time NN cord-277909-rn1dow26 113 4 PCR PCR NNP cord-277909-rn1dow26 113 5 , , , cord-277909-rn1dow26 113 6 the the DT cord-277909-rn1dow26 113 7 signal signal NN cord-277909-rn1dow26 113 8 is be VBZ cord-277909-rn1dow26 113 9 detected detect VBN cord-277909-rn1dow26 113 10 early early RB cord-277909-rn1dow26 113 11 in in IN cord-277909-rn1dow26 113 12 the the DT cord-277909-rn1dow26 113 13 amplification amplification NN cord-277909-rn1dow26 113 14 process process NN cord-277909-rn1dow26 113 15 , , , cord-277909-rn1dow26 113 16 and and CC cord-277909-rn1dow26 113 17 therefore therefore RB cord-277909-rn1dow26 113 18 the the DT cord-277909-rn1dow26 113 19 end end NN cord-277909-rn1dow26 113 20 - - HYPH cord-277909-rn1dow26 113 21 point point NN cord-277909-rn1dow26 113 22 variation variation NN cord-277909-rn1dow26 113 23 seen see VBN cord-277909-rn1dow26 113 24 in in IN cord-277909-rn1dow26 113 25 gel gel NN cord-277909-rn1dow26 113 26 - - HYPH cord-277909-rn1dow26 113 27 based base VBN cord-277909-rn1dow26 113 28 assays assay NNS cord-277909-rn1dow26 113 29 does do VBZ cord-277909-rn1dow26 113 30 not not RB cord-277909-rn1dow26 113 31 affect affect VB cord-277909-rn1dow26 113 32 the the DT cord-277909-rn1dow26 113 33 result result NN cord-277909-rn1dow26 113 34 . . . cord-277909-rn1dow26 114 1 Also also RB cord-277909-rn1dow26 114 2 , , , cord-277909-rn1dow26 114 3 careful careful JJ cord-277909-rn1dow26 114 4 design design NN cord-277909-rn1dow26 114 5 of of IN cord-277909-rn1dow26 114 6 the the DT cord-277909-rn1dow26 114 7 assay assay NN cord-277909-rn1dow26 114 8 can can MD cord-277909-rn1dow26 114 9 reduce reduce VB cord-277909-rn1dow26 114 10 primer primer NN cord-277909-rn1dow26 114 11 - - HYPH cord-277909-rn1dow26 114 12 dimer dimer NN cord-277909-rn1dow26 114 13 formation formation NN cord-277909-rn1dow26 114 14 Fig Fig NNP cord-277909-rn1dow26 114 15 . . . cord-277909-rn1dow26 115 1 5 5 LS cord-277909-rn1dow26 115 2 . . . cord-277909-rn1dow26 116 1 Structure structure NN cord-277909-rn1dow26 116 2 within within IN cord-277909-rn1dow26 116 3 PCR PCR NNP cord-277909-rn1dow26 116 4 amplicons amplicon NNS cord-277909-rn1dow26 116 5 may may MD cord-277909-rn1dow26 116 6 affect affect VB cord-277909-rn1dow26 116 7 the the DT cord-277909-rn1dow26 116 8 sensitivity sensitivity NN cord-277909-rn1dow26 116 9 of of IN cord-277909-rn1dow26 116 10 an an DT cord-277909-rn1dow26 116 11 assay assay NN cord-277909-rn1dow26 116 12 . . . cord-277909-rn1dow26 117 1 Respiratory respiratory JJ cord-277909-rn1dow26 117 2 syncitial syncitial JJ cord-277909-rn1dow26 117 3 virus virus NN cord-277909-rn1dow26 117 4 ( ( -LRB- cord-277909-rn1dow26 117 5 RSV)-A RSV)-A NNP cord-277909-rn1dow26 117 6 detection detection NN cord-277909-rn1dow26 117 7 limit limit NN cord-277909-rn1dow26 117 8 is be VBZ cord-277909-rn1dow26 117 9 10 10 CD cord-277909-rn1dow26 117 10 2 2 CD cord-277909-rn1dow26 117 11 copies copy NNS cord-277909-rn1dow26 117 12 / / SYM cord-277909-rn1dow26 117 13 reaction reaction NN cord-277909-rn1dow26 117 14 , , , cord-277909-rn1dow26 117 15 while while IN cord-277909-rn1dow26 117 16 RSV RSV NNP cord-277909-rn1dow26 117 17 - - HYPH cord-277909-rn1dow26 117 18 B B NNP cord-277909-rn1dow26 117 19 which which WDT cord-277909-rn1dow26 117 20 is be VBZ cord-277909-rn1dow26 117 21 more more RBR cord-277909-rn1dow26 117 22 structured structured JJ cord-277909-rn1dow26 117 23 has have VBZ cord-277909-rn1dow26 117 24 a a DT cord-277909-rn1dow26 117 25 detection detection NN cord-277909-rn1dow26 117 26 limit limit NN cord-277909-rn1dow26 117 27 of of IN cord-277909-rn1dow26 117 28 10 10 CD cord-277909-rn1dow26 117 29 4 4 CD cord-277909-rn1dow26 117 30 -10 -10 CD cord-277909-rn1dow26 117 31 5 5 CD cord-277909-rn1dow26 117 32 copies copy NNS cord-277909-rn1dow26 117 33 per per IN cord-277909-rn1dow26 117 34 reaction reaction NN cord-277909-rn1dow26 117 35 . . . cord-277909-rn1dow26 118 1 and and CC cord-277909-rn1dow26 118 2 increase increase VB cord-277909-rn1dow26 118 3 the the DT cord-277909-rn1dow26 118 4 efficiency efficiency NN cord-277909-rn1dow26 118 5 of of IN cord-277909-rn1dow26 118 6 the the DT cord-277909-rn1dow26 118 7 specific specific JJ cord-277909-rn1dow26 118 8 amplification amplification NN cord-277909-rn1dow26 118 9 reaction reaction NN cord-277909-rn1dow26 118 10 . . . cord-277909-rn1dow26 119 1 Consequently consequently RB cord-277909-rn1dow26 119 2 , , , cord-277909-rn1dow26 119 3 many many JJ cord-277909-rn1dow26 119 4 manufacturers manufacturer NNS cord-277909-rn1dow26 119 5 of of IN cord-277909-rn1dow26 119 6 real real JJ cord-277909-rn1dow26 119 7 time time NN cord-277909-rn1dow26 119 8 PCR pcr NN cord-277909-rn1dow26 119 9 equipment equipment NN cord-277909-rn1dow26 119 10 and and CC cord-277909-rn1dow26 119 11 oligonucleotide oligonucleotide NN cord-277909-rn1dow26 119 12 primers primer NNS cord-277909-rn1dow26 119 13 and and CC cord-277909-rn1dow26 119 14 probes probe NNS cord-277909-rn1dow26 119 15 no no RB cord-277909-rn1dow26 119 16 longer longer RB cord-277909-rn1dow26 119 17 recommend recommend VB cord-277909-rn1dow26 119 18 optimising optimise VBG cord-277909-rn1dow26 119 19 primer primer NN cord-277909-rn1dow26 119 20 and and CC cord-277909-rn1dow26 119 21 probe probe VB cord-277909-rn1dow26 119 22 concentrations concentration NNS cord-277909-rn1dow26 119 23 for for IN cord-277909-rn1dow26 119 24 real real JJ cord-277909-rn1dow26 119 25 time time NN cord-277909-rn1dow26 119 26 Taqman Taqman NNP cord-277909-rn1dow26 119 27 assays assay NNS cord-277909-rn1dow26 119 28 . . . cord-277909-rn1dow26 120 1 Despite despite IN cord-277909-rn1dow26 120 2 this this DT cord-277909-rn1dow26 120 3 we -PRON- PRP cord-277909-rn1dow26 120 4 still still RB cord-277909-rn1dow26 120 5 perform perform VBP cord-277909-rn1dow26 120 6 an an DT cord-277909-rn1dow26 120 7 initial initial JJ cord-277909-rn1dow26 120 8 optimisation optimisation NN cord-277909-rn1dow26 120 9 of of IN cord-277909-rn1dow26 120 10 both both DT cord-277909-rn1dow26 120 11 primer primer NN cord-277909-rn1dow26 120 12 and and CC cord-277909-rn1dow26 120 13 probe probe VB cord-277909-rn1dow26 120 14 concentrations concentration NNS cord-277909-rn1dow26 120 15 to to TO cord-277909-rn1dow26 120 16 ensure ensure VB cord-277909-rn1dow26 120 17 we -PRON- PRP cord-277909-rn1dow26 120 18 are be VBP cord-277909-rn1dow26 120 19 running run VBG cord-277909-rn1dow26 120 20 our -PRON- PRP$ cord-277909-rn1dow26 120 21 real real JJ cord-277909-rn1dow26 120 22 time time NN cord-277909-rn1dow26 120 23 PCR pcr NN cord-277909-rn1dow26 120 24 assays assay NNS cord-277909-rn1dow26 120 25 at at IN cord-277909-rn1dow26 120 26 their -PRON- PRP$ cord-277909-rn1dow26 120 27 most most RBS cord-277909-rn1dow26 120 28 sensitive sensitive JJ cord-277909-rn1dow26 120 29 and and CC cord-277909-rn1dow26 120 30 efficient efficient JJ cord-277909-rn1dow26 120 31 . . . cord-277909-rn1dow26 121 1 Although although IN cord-277909-rn1dow26 121 2 for for IN cord-277909-rn1dow26 121 3 the the DT cord-277909-rn1dow26 121 4 majority majority NN cord-277909-rn1dow26 121 5 of of IN cord-277909-rn1dow26 121 6 our -PRON- PRP$ cord-277909-rn1dow26 121 7 assays assay NNS cord-277909-rn1dow26 121 8 the the DT cord-277909-rn1dow26 121 9 optimal optimal JJ cord-277909-rn1dow26 121 10 concentrations concentration NNS cord-277909-rn1dow26 121 11 are be VBP cord-277909-rn1dow26 121 12 1000:1000:300 1000:1000:300 CD cord-277909-rn1dow26 121 13 nM nm CD cord-277909-rn1dow26 121 14 ( ( -LRB- cord-277909-rn1dow26 121 15 forward forward RB cord-277909-rn1dow26 121 16 : : : cord-277909-rn1dow26 121 17 reverse reverse VB cord-277909-rn1dow26 121 18 : : : cord-277909-rn1dow26 121 19 probe probe NN cord-277909-rn1dow26 121 20 ) ) -RRB- cord-277909-rn1dow26 121 21 , , , cord-277909-rn1dow26 121 22 we -PRON- PRP cord-277909-rn1dow26 121 23 have have VBP cord-277909-rn1dow26 121 24 observed observe VBN cord-277909-rn1dow26 121 25 on on IN cord-277909-rn1dow26 121 26 several several JJ cord-277909-rn1dow26 121 27 occasions occasion NNS cord-277909-rn1dow26 121 28 that that IN cord-277909-rn1dow26 121 29 the the DT cord-277909-rn1dow26 121 30 optimal optimal JJ cord-277909-rn1dow26 121 31 primer primer NN cord-277909-rn1dow26 121 32 and and CC cord-277909-rn1dow26 121 33 probe probe NN cord-277909-rn1dow26 121 34 concentrations concentration NNS cord-277909-rn1dow26 121 35 were be VBD cord-277909-rn1dow26 121 36 different different JJ cord-277909-rn1dow26 121 37 to to IN cord-277909-rn1dow26 121 38 the the DT cord-277909-rn1dow26 121 39 values value NNS cord-277909-rn1dow26 121 40 recommended recommend VBN cord-277909-rn1dow26 121 41 . . . cord-277909-rn1dow26 122 1 Our -PRON- PRP$ cord-277909-rn1dow26 122 2 method method NN cord-277909-rn1dow26 122 3 for for IN cord-277909-rn1dow26 122 4 primer primer NN cord-277909-rn1dow26 122 5 and and CC cord-277909-rn1dow26 122 6 probe probe NN cord-277909-rn1dow26 122 7 optimisation optimisation NN cord-277909-rn1dow26 122 8 is be VBZ cord-277909-rn1dow26 122 9 available available JJ cord-277909-rn1dow26 122 10 online online RB cord-277909-rn1dow26 122 11 ( ( -LRB- cord-277909-rn1dow26 122 12 www.clinical-virology.org www.clinical-virology.org NNP cord-277909-rn1dow26 122 13 ) ) -RRB- cord-277909-rn1dow26 122 14 . . . cord-277909-rn1dow26 123 1 However however RB cord-277909-rn1dow26 123 2 , , , cord-277909-rn1dow26 123 3 other other JJ cord-277909-rn1dow26 123 4 methods method NNS cord-277909-rn1dow26 123 5 will will MD cord-277909-rn1dow26 123 6 also also RB cord-277909-rn1dow26 123 7 be be VB cord-277909-rn1dow26 123 8 available available JJ cord-277909-rn1dow26 123 9 . . . cord-277909-rn1dow26 124 1 Optimisation optimisation NN cord-277909-rn1dow26 124 2 of of IN cord-277909-rn1dow26 124 3 a a DT cord-277909-rn1dow26 124 4 real real JJ cord-277909-rn1dow26 124 5 time time NN cord-277909-rn1dow26 124 6 PCR PCR NNP cord-277909-rn1dow26 124 7 requires require VBZ cord-277909-rn1dow26 124 8 positive positive JJ cord-277909-rn1dow26 124 9 control control NN cord-277909-rn1dow26 124 10 material material NN cord-277909-rn1dow26 124 11 . . . cord-277909-rn1dow26 125 1 Where where WRB cord-277909-rn1dow26 125 2 positive positive JJ cord-277909-rn1dow26 125 3 control control NN cord-277909-rn1dow26 125 4 is be VBZ cord-277909-rn1dow26 125 5 not not RB cord-277909-rn1dow26 125 6 available available JJ cord-277909-rn1dow26 125 7 ( ( -LRB- cord-277909-rn1dow26 125 8 examples example NNS cord-277909-rn1dow26 125 9 being be VBG cord-277909-rn1dow26 125 10 a a DT cord-277909-rn1dow26 125 11 virus virus NN cord-277909-rn1dow26 125 12 , , , cord-277909-rn1dow26 125 13 which which WDT cord-277909-rn1dow26 125 14 can can MD cord-277909-rn1dow26 125 15 not not RB cord-277909-rn1dow26 125 16 be be VB cord-277909-rn1dow26 125 17 cultured cultured JJ cord-277909-rn1dow26 125 18 or or CC cord-277909-rn1dow26 125 19 a a DT cord-277909-rn1dow26 125 20 highly highly RB cord-277909-rn1dow26 125 21 pathogenic pathogenic JJ cord-277909-rn1dow26 125 22 virus virus NN cord-277909-rn1dow26 125 23 such such JJ cord-277909-rn1dow26 125 24 as as IN cord-277909-rn1dow26 125 25 H5 H5 NNP cord-277909-rn1dow26 125 26 influenza influenza NN cord-277909-rn1dow26 125 27 or or CC cord-277909-rn1dow26 125 28 SARS SARS NNP cord-277909-rn1dow26 125 29 coronavirus coronavirus NN cord-277909-rn1dow26 125 30 ) ) -RRB- cord-277909-rn1dow26 125 31 , , , cord-277909-rn1dow26 125 32 DNA DNA NNP cord-277909-rn1dow26 125 33 or or CC cord-277909-rn1dow26 125 34 RNA RNA NNP cord-277909-rn1dow26 125 35 oligonucleotide oligonucleotide NN cord-277909-rn1dow26 125 36 targets target NNS cord-277909-rn1dow26 125 37 may may MD cord-277909-rn1dow26 125 38 be be VB cord-277909-rn1dow26 125 39 ordered order VBN cord-277909-rn1dow26 125 40 . . . cord-277909-rn1dow26 126 1 These these DT cord-277909-rn1dow26 126 2 are be VBP cord-277909-rn1dow26 126 3 also also RB cord-277909-rn1dow26 126 4 useful useful JJ cord-277909-rn1dow26 126 5 as as IN cord-277909-rn1dow26 126 6 alternatives alternative NNS cord-277909-rn1dow26 126 7 to to IN cord-277909-rn1dow26 126 8 plasmids plasmid NNS cord-277909-rn1dow26 126 9 as as IN cord-277909-rn1dow26 126 10 standards standard NNS cord-277909-rn1dow26 126 11 in in IN cord-277909-rn1dow26 126 12 quantitative quantitative JJ cord-277909-rn1dow26 126 13 assays assay NNS cord-277909-rn1dow26 126 14 . . . cord-277909-rn1dow26 127 1 It -PRON- PRP cord-277909-rn1dow26 127 2 should should MD cord-277909-rn1dow26 127 3 be be VB cord-277909-rn1dow26 127 4 noted note VBN cord-277909-rn1dow26 127 5 that that IN cord-277909-rn1dow26 127 6 these these DT cord-277909-rn1dow26 127 7 oligonucleotide oligonucleotide JJ cord-277909-rn1dow26 127 8 controls control NNS cord-277909-rn1dow26 127 9 must must MD cord-277909-rn1dow26 127 10 be be VB cord-277909-rn1dow26 127 11 ordered order VBN cord-277909-rn1dow26 127 12 from from IN cord-277909-rn1dow26 127 13 a a DT cord-277909-rn1dow26 127 14 separate separate JJ cord-277909-rn1dow26 127 15 supplier supplier NN cord-277909-rn1dow26 127 16 to to TO cord-277909-rn1dow26 127 17 prevent prevent VB cord-277909-rn1dow26 127 18 contamination contamination NN cord-277909-rn1dow26 127 19 of of IN cord-277909-rn1dow26 127 20 the the DT cord-277909-rn1dow26 127 21 primer primer NN cord-277909-rn1dow26 127 22 - - HYPH cord-277909-rn1dow26 127 23 probe probe NN cord-277909-rn1dow26 127 24 set set NN cord-277909-rn1dow26 127 25 , , , cord-277909-rn1dow26 127 26 and and CC cord-277909-rn1dow26 127 27 should should MD cord-277909-rn1dow26 127 28 be be VB cord-277909-rn1dow26 127 29 diluted dilute VBN cord-277909-rn1dow26 127 30 in in IN cord-277909-rn1dow26 127 31 a a DT cord-277909-rn1dow26 127 32 separate separate JJ cord-277909-rn1dow26 127 33 laboratory laboratory NN cord-277909-rn1dow26 127 34 prior prior RB cord-277909-rn1dow26 127 35 to to TO cord-277909-rn1dow26 127 36 use use NN cord-277909-rn1dow26 127 37 as as IN cord-277909-rn1dow26 127 38 they -PRON- PRP cord-277909-rn1dow26 127 39 may may MD cord-277909-rn1dow26 127 40 contain contain VB cord-277909-rn1dow26 127 41 up up IN cord-277909-rn1dow26 127 42 to to TO cord-277909-rn1dow26 127 43 10 10 CD cord-277909-rn1dow26 127 44 17 17 CD cord-277909-rn1dow26 127 45 target target NN cord-277909-rn1dow26 127 46 copies copy NNS cord-277909-rn1dow26 127 47 per per IN cord-277909-rn1dow26 127 48 ml ml NN cord-277909-rn1dow26 127 49 , , , cord-277909-rn1dow26 127 50 and and CC cord-277909-rn1dow26 127 51 are be VBP cord-277909-rn1dow26 127 52 therefore therefore RB cord-277909-rn1dow26 127 53 a a DT cord-277909-rn1dow26 127 54 considerable considerable JJ cord-277909-rn1dow26 127 55 source source NN cord-277909-rn1dow26 127 56 of of IN cord-277909-rn1dow26 127 57 potential potential JJ cord-277909-rn1dow26 127 58 contamination contamination NN cord-277909-rn1dow26 127 59 . . . cord-277909-rn1dow26 128 1 We -PRON- PRP cord-277909-rn1dow26 128 2 have have VBP cord-277909-rn1dow26 128 3 observed observe VBN cord-277909-rn1dow26 128 4 contamination contamination NN cord-277909-rn1dow26 128 5 in in IN cord-277909-rn1dow26 128 6 erythrovirus erythrovirus NNP cord-277909-rn1dow26 128 7 B19 B19 NNP cord-277909-rn1dow26 128 8 primers primer NNS cord-277909-rn1dow26 128 9 purchased purchase VBD cord-277909-rn1dow26 128 10 several several JJ cord-277909-rn1dow26 128 11 months month NNS cord-277909-rn1dow26 128 12 after after IN cord-277909-rn1dow26 128 13 a a DT cord-277909-rn1dow26 128 14 full full JJ cord-277909-rn1dow26 128 15 length length NN cord-277909-rn1dow26 128 16 oligonucleotide oligonucleotide JJ cord-277909-rn1dow26 128 17 control control NN cord-277909-rn1dow26 128 18 was be VBD cord-277909-rn1dow26 128 19 ordered order VBN cord-277909-rn1dow26 128 20 from from IN cord-277909-rn1dow26 128 21 the the DT cord-277909-rn1dow26 128 22 same same JJ cord-277909-rn1dow26 128 23 supplier supplier NN cord-277909-rn1dow26 128 24 ( ( -LRB- cord-277909-rn1dow26 128 25 Fig Fig NNP cord-277909-rn1dow26 128 26 . . . cord-277909-rn1dow26 128 27 6 6 CD cord-277909-rn1dow26 128 28 ) ) -RRB- cord-277909-rn1dow26 128 29 . . . cord-277909-rn1dow26 129 1 Once once RB cord-277909-rn1dow26 129 2 the the DT cord-277909-rn1dow26 129 3 assay assay NN cord-277909-rn1dow26 129 4 is be VBZ cord-277909-rn1dow26 129 5 optimised optimise VBN cord-277909-rn1dow26 129 6 , , , cord-277909-rn1dow26 129 7 it -PRON- PRP cord-277909-rn1dow26 129 8 is be VBZ cord-277909-rn1dow26 129 9 essential essential JJ cord-277909-rn1dow26 129 10 to to TO cord-277909-rn1dow26 129 11 check check VB cord-277909-rn1dow26 129 12 the the DT cord-277909-rn1dow26 129 13 sensitivity sensitivity NN cord-277909-rn1dow26 129 14 and and CC cord-277909-rn1dow26 129 15 specificity specificity NN cord-277909-rn1dow26 129 16 of of IN cord-277909-rn1dow26 129 17 a a DT cord-277909-rn1dow26 129 18 new new JJ cord-277909-rn1dow26 129 19 PCR PCR NNP cord-277909-rn1dow26 129 20 assay assay NN cord-277909-rn1dow26 129 21 by by IN cord-277909-rn1dow26 129 22 using use VBG cord-277909-rn1dow26 129 23 a a DT cord-277909-rn1dow26 129 24 selection selection NN cord-277909-rn1dow26 129 25 of of IN cord-277909-rn1dow26 129 26 sample sample NN cord-277909-rn1dow26 129 27 ' ' `` cord-277909-rn1dow26 129 28 panels panel NNS cord-277909-rn1dow26 129 29 ' ' '' cord-277909-rn1dow26 129 30 . . . cord-277909-rn1dow26 130 1 There there EX cord-277909-rn1dow26 130 2 is be VBZ cord-277909-rn1dow26 130 3 much much JJ cord-277909-rn1dow26 130 4 debate debate NN cord-277909-rn1dow26 130 5 about about IN cord-277909-rn1dow26 130 6 what what WP cord-277909-rn1dow26 130 7 is be VBZ cord-277909-rn1dow26 130 8 an an DT cord-277909-rn1dow26 130 9 acceptable acceptable JJ cord-277909-rn1dow26 130 10 validation validation NN cord-277909-rn1dow26 130 11 process process NN cord-277909-rn1dow26 130 12 . . . cord-277909-rn1dow26 131 1 These these DT cord-277909-rn1dow26 131 2 should should MD cord-277909-rn1dow26 131 3 minimally minimally RB cord-277909-rn1dow26 131 4 include include VB cord-277909-rn1dow26 131 5 clinical clinical JJ cord-277909-rn1dow26 131 6 samples sample NNS cord-277909-rn1dow26 131 7 known know VBN cord-277909-rn1dow26 131 8 to to TO cord-277909-rn1dow26 131 9 be be VB cord-277909-rn1dow26 131 10 positive positive JJ cord-277909-rn1dow26 131 11 by by IN cord-277909-rn1dow26 131 12 the the DT cord-277909-rn1dow26 131 13 current current JJ cord-277909-rn1dow26 131 14 standard standard JJ cord-277909-rn1dow26 131 15 assay assay NN cord-277909-rn1dow26 131 16 and and CC cord-277909-rn1dow26 131 17 should should MD cord-277909-rn1dow26 131 18 consist consist VB cord-277909-rn1dow26 131 19 of of IN cord-277909-rn1dow26 131 20 the the DT cord-277909-rn1dow26 131 21 sample sample NN cord-277909-rn1dow26 131 22 types type NNS cord-277909-rn1dow26 131 23 commonly commonly RB cord-277909-rn1dow26 131 24 submitted submit VBN cord-277909-rn1dow26 131 25 to to TO cord-277909-rn1dow26 131 26 be be VB cord-277909-rn1dow26 131 27 examined examine VBN cord-277909-rn1dow26 131 28 for for IN cord-277909-rn1dow26 131 29 the the DT cord-277909-rn1dow26 131 30 virus virus NN cord-277909-rn1dow26 131 31 in in IN cord-277909-rn1dow26 131 32 question question NN cord-277909-rn1dow26 131 33 . . . cord-277909-rn1dow26 132 1 Clinical clinical JJ cord-277909-rn1dow26 132 2 samples sample NNS cord-277909-rn1dow26 132 3 tested test VBD cord-277909-rn1dow26 132 4 negative negative JJ cord-277909-rn1dow26 132 5 by by IN cord-277909-rn1dow26 132 6 the the DT cord-277909-rn1dow26 132 7 previous previous JJ cord-277909-rn1dow26 132 8 method method NN cord-277909-rn1dow26 132 9 should should MD cord-277909-rn1dow26 132 10 also also RB cord-277909-rn1dow26 132 11 be be VB cord-277909-rn1dow26 132 12 examined examine VBN cord-277909-rn1dow26 132 13 to to TO cord-277909-rn1dow26 132 14 determine determine VB cord-277909-rn1dow26 132 15 if if IN cord-277909-rn1dow26 132 16 the the DT cord-277909-rn1dow26 132 17 new new JJ cord-277909-rn1dow26 132 18 assay assay NN cord-277909-rn1dow26 132 19 is be VBZ cord-277909-rn1dow26 132 20 more more RBR cord-277909-rn1dow26 132 21 sensitive sensitive JJ cord-277909-rn1dow26 132 22 than than IN cord-277909-rn1dow26 132 23 the the DT cord-277909-rn1dow26 132 24 current current JJ cord-277909-rn1dow26 132 25 test test NN cord-277909-rn1dow26 132 26 , , , cord-277909-rn1dow26 132 27 and and CC cord-277909-rn1dow26 132 28 samples sample NNS cord-277909-rn1dow26 132 29 known know VBN cord-277909-rn1dow26 132 30 to to TO cord-277909-rn1dow26 132 31 be be VB cord-277909-rn1dow26 132 32 positive positive JJ cord-277909-rn1dow26 132 33 for for IN cord-277909-rn1dow26 132 34 other other JJ cord-277909-rn1dow26 132 35 agents agent NNS cord-277909-rn1dow26 132 36 should should MD cord-277909-rn1dow26 132 37 be be VB cord-277909-rn1dow26 132 38 tested test VBN cord-277909-rn1dow26 132 39 to to TO cord-277909-rn1dow26 132 40 confirm confirm VB cord-277909-rn1dow26 132 41 assay assay NN cord-277909-rn1dow26 132 42 Fig Fig NNP cord-277909-rn1dow26 132 43 . . . cord-277909-rn1dow26 132 44 6 6 CD cord-277909-rn1dow26 132 45 . . . cord-277909-rn1dow26 133 1 Contamination contamination NN cord-277909-rn1dow26 133 2 of of IN cord-277909-rn1dow26 133 3 primer primer NN cord-277909-rn1dow26 133 4 and and CC cord-277909-rn1dow26 133 5 probes probe NNS cord-277909-rn1dow26 133 6 with with IN cord-277909-rn1dow26 133 7 assay assay NN cord-277909-rn1dow26 133 8 target target NN cord-277909-rn1dow26 133 9 produced produce VBN cord-277909-rn1dow26 133 10 at at IN cord-277909-rn1dow26 133 11 the the DT cord-277909-rn1dow26 133 12 same same JJ cord-277909-rn1dow26 133 13 facility facility NN cord-277909-rn1dow26 133 14 . . . cord-277909-rn1dow26 134 1 Label Label NNP cord-277909-rn1dow26 134 2 1 1 CD cord-277909-rn1dow26 134 3 , , , cord-277909-rn1dow26 134 4 reaction reaction NN cord-277909-rn1dow26 134 5 component component NN cord-277909-rn1dow26 134 6 : : : cord-277909-rn1dow26 135 1 supplier supplier NN cord-277909-rn1dow26 135 2 A a DT cord-277909-rn1dow26 135 3 salt salt NN cord-277909-rn1dow26 135 4 free free JJ cord-277909-rn1dow26 135 5 negative negative JJ cord-277909-rn1dow26 135 6 control control NN cord-277909-rn1dow26 135 7 , , , cord-277909-rn1dow26 135 8 mean mean VB cord-277909-rn1dow26 135 9 C C NNP cord-277909-rn1dow26 135 10 T t NN cord-277909-rn1dow26 135 11 value value NN cord-277909-rn1dow26 135 12 : : : cord-277909-rn1dow26 135 13 21.08 21.08 CD cord-277909-rn1dow26 135 14 ; ; : cord-277909-rn1dow26 135 15 label label NNP cord-277909-rn1dow26 135 16 2 2 CD cord-277909-rn1dow26 135 17 , , , cord-277909-rn1dow26 135 18 reaction reaction NN cord-277909-rn1dow26 135 19 component component NN cord-277909-rn1dow26 135 20 : : : cord-277909-rn1dow26 135 21 supplier supplier NN cord-277909-rn1dow26 135 22 A a DT cord-277909-rn1dow26 135 23 salt salt NN cord-277909-rn1dow26 135 24 free free JJ cord-277909-rn1dow26 135 25 positive positive JJ cord-277909-rn1dow26 135 26 control control NN cord-277909-rn1dow26 135 27 ( ( -LRB- cord-277909-rn1dow26 135 28 −7 −7 NNP cord-277909-rn1dow26 135 29 ) ) -RRB- cord-277909-rn1dow26 136 1 , , , cord-277909-rn1dow26 136 2 mean mean VB cord-277909-rn1dow26 136 3 C C NNP cord-277909-rn1dow26 136 4 T t NN cord-277909-rn1dow26 136 5 value value NN cord-277909-rn1dow26 136 6 : : : cord-277909-rn1dow26 136 7 21.10 21.10 CD cord-277909-rn1dow26 136 8 ; ; : cord-277909-rn1dow26 136 9 label label NNP cord-277909-rn1dow26 136 10 3 3 CD cord-277909-rn1dow26 136 11 , , , cord-277909-rn1dow26 136 12 reaction reaction NN cord-277909-rn1dow26 136 13 component component NN cord-277909-rn1dow26 136 14 : : : cord-277909-rn1dow26 137 1 supplier supplier NN cord-277909-rn1dow26 137 2 A a DT cord-277909-rn1dow26 137 3 HPLC HPLC NNP cord-277909-rn1dow26 137 4 negative negative JJ cord-277909-rn1dow26 137 5 control control NN cord-277909-rn1dow26 137 6 , , , cord-277909-rn1dow26 137 7 mean mean VB cord-277909-rn1dow26 137 8 C C NNP cord-277909-rn1dow26 137 9 T t NN cord-277909-rn1dow26 137 10 value value NN cord-277909-rn1dow26 137 11 : : : cord-277909-rn1dow26 137 12 33.28 33.28 CD cord-277909-rn1dow26 137 13 ; ; : cord-277909-rn1dow26 137 14 label label NNP cord-277909-rn1dow26 137 15 4 4 CD cord-277909-rn1dow26 137 16 , , , cord-277909-rn1dow26 137 17 reaction reaction NN cord-277909-rn1dow26 137 18 component component NN cord-277909-rn1dow26 137 19 : : : cord-277909-rn1dow26 138 1 supplier supplier NN cord-277909-rn1dow26 138 2 A a DT cord-277909-rn1dow26 138 3 HPLC HPLC NNP cord-277909-rn1dow26 138 4 positive positive JJ cord-277909-rn1dow26 138 5 control control NN cord-277909-rn1dow26 138 6 ( ( -LRB- cord-277909-rn1dow26 138 7 −7 −7 NNP cord-277909-rn1dow26 138 8 ) ) -RRB- cord-277909-rn1dow26 138 9 , , , cord-277909-rn1dow26 138 10 mean mean VBP cord-277909-rn1dow26 138 11 C C NNP cord-277909-rn1dow26 138 12 T t NN cord-277909-rn1dow26 138 13 value value NN cord-277909-rn1dow26 138 14 : : : cord-277909-rn1dow26 138 15 30.68 30.68 CD cord-277909-rn1dow26 138 16 ; ; : cord-277909-rn1dow26 138 17 label label NNP cord-277909-rn1dow26 138 18 5 5 CD cord-277909-rn1dow26 138 19 , , , cord-277909-rn1dow26 138 20 reaction reaction NN cord-277909-rn1dow26 138 21 component component NN cord-277909-rn1dow26 138 22 : : : cord-277909-rn1dow26 138 23 supplier supplier NNP cord-277909-rn1dow26 138 24 B B NNP cord-277909-rn1dow26 138 25 negative negative JJ cord-277909-rn1dow26 138 26 control control NN cord-277909-rn1dow26 138 27 , , , cord-277909-rn1dow26 138 28 mean mean VB cord-277909-rn1dow26 138 29 C C NNP cord-277909-rn1dow26 138 30 T t NN cord-277909-rn1dow26 138 31 value value NN cord-277909-rn1dow26 138 32 : : : cord-277909-rn1dow26 138 33 40.00 40.00 CD cord-277909-rn1dow26 138 34 ; ; : cord-277909-rn1dow26 138 35 label label NNP cord-277909-rn1dow26 138 36 6 6 CD cord-277909-rn1dow26 138 37 , , , cord-277909-rn1dow26 138 38 reaction reaction NN cord-277909-rn1dow26 138 39 component component NN cord-277909-rn1dow26 138 40 : : : cord-277909-rn1dow26 138 41 supplier supplier NN cord-277909-rn1dow26 138 42 B B NNP cord-277909-rn1dow26 138 43 positive positive JJ cord-277909-rn1dow26 138 44 control control NN cord-277909-rn1dow26 138 45 ( ( -LRB- cord-277909-rn1dow26 138 46 −7 −7 NNP cord-277909-rn1dow26 138 47 ) ) -RRB- cord-277909-rn1dow26 138 48 , , . cord-277909-rn1dow26 139 1 mean mean VB cord-277909-rn1dow26 140 1 C C NNP cord-277909-rn1dow26 140 2 T T NNP cord-277909-rn1dow26 140 3 value value NN cord-277909-rn1dow26 140 4 : : : cord-277909-rn1dow26 140 5 29.93 29.93 CD cord-277909-rn1dow26 140 6 . . . cord-277909-rn1dow26 141 1 A a DT cord-277909-rn1dow26 141 2 full full JJ cord-277909-rn1dow26 141 3 length length NN cord-277909-rn1dow26 141 4 DNA dna NN cord-277909-rn1dow26 141 5 oligonucleotide oligonucleotide NN cord-277909-rn1dow26 141 6 representing represent VBG cord-277909-rn1dow26 141 7 the the DT cord-277909-rn1dow26 141 8 amplicon amplicon NN cord-277909-rn1dow26 141 9 of of IN cord-277909-rn1dow26 141 10 a a DT cord-277909-rn1dow26 141 11 B19 B19 NNP cord-277909-rn1dow26 141 12 real real JJ cord-277909-rn1dow26 141 13 time time NN cord-277909-rn1dow26 141 14 PCR pcr NN cord-277909-rn1dow26 141 15 assay assay NN cord-277909-rn1dow26 141 16 was be VBD cord-277909-rn1dow26 141 17 synthesised synthesise VBN cord-277909-rn1dow26 141 18 by by IN cord-277909-rn1dow26 141 19 supplier supplier NN cord-277909-rn1dow26 141 20 A. a. NN cord-277909-rn1dow26 142 1 During during IN cord-277909-rn1dow26 142 2 a a DT cord-277909-rn1dow26 142 3 later later JJ cord-277909-rn1dow26 142 4 investigation investigation NN cord-277909-rn1dow26 142 5 into into IN cord-277909-rn1dow26 142 6 assay assay NN cord-277909-rn1dow26 142 7 contamination contamination NN cord-277909-rn1dow26 142 8 following follow VBG cord-277909-rn1dow26 142 9 a a DT cord-277909-rn1dow26 142 10 reagent reagent NN cord-277909-rn1dow26 142 11 change change NN cord-277909-rn1dow26 142 12 , , , cord-277909-rn1dow26 142 13 primers primer NNS cord-277909-rn1dow26 142 14 and and CC cord-277909-rn1dow26 142 15 probes probe NNS cord-277909-rn1dow26 142 16 were be VBD cord-277909-rn1dow26 142 17 again again RB cord-277909-rn1dow26 142 18 purchased purchase VBN cord-277909-rn1dow26 142 19 from from IN cord-277909-rn1dow26 142 20 supplier supplier NN cord-277909-rn1dow26 142 21 A A NNP cord-277909-rn1dow26 142 22 ( ( -LRB- cord-277909-rn1dow26 142 23 salt salt NN cord-277909-rn1dow26 142 24 free free JJ cord-277909-rn1dow26 142 25 and and CC cord-277909-rn1dow26 142 26 HPLC HPLC NNP cord-277909-rn1dow26 142 27 purified purify VBN cord-277909-rn1dow26 142 28 ) ) -RRB- cord-277909-rn1dow26 142 29 , , , cord-277909-rn1dow26 142 30 and and CC cord-277909-rn1dow26 142 31 from from IN cord-277909-rn1dow26 142 32 an an DT cord-277909-rn1dow26 142 33 alternative alternative JJ cord-277909-rn1dow26 142 34 supplier supplier NN cord-277909-rn1dow26 143 1 B. B. NNP cord-277909-rn1dow26 143 2 The the DT cord-277909-rn1dow26 143 3 reagents reagent NNS cord-277909-rn1dow26 143 4 purchased purchase VBN cord-277909-rn1dow26 143 5 from from IN cord-277909-rn1dow26 143 6 supplier supplier NN cord-277909-rn1dow26 143 7 B B NNP cord-277909-rn1dow26 143 8 ( ( -LRB- cord-277909-rn1dow26 143 9 5 5 CD cord-277909-rn1dow26 143 10 and and CC cord-277909-rn1dow26 143 11 6 6 CD cord-277909-rn1dow26 143 12 ) ) -RRB- cord-277909-rn1dow26 143 13 were be VBD cord-277909-rn1dow26 143 14 clean clean JJ cord-277909-rn1dow26 143 15 , , , cord-277909-rn1dow26 143 16 whilst whilst IN cord-277909-rn1dow26 143 17 those those DT cord-277909-rn1dow26 143 18 from from IN cord-277909-rn1dow26 143 19 supplier supplier NN cord-277909-rn1dow26 143 20 A A NNP cord-277909-rn1dow26 143 21 ( ( -LRB- cord-277909-rn1dow26 143 22 1 1 CD cord-277909-rn1dow26 143 23 + + SYM cord-277909-rn1dow26 143 24 2 2 CD cord-277909-rn1dow26 143 25 ) ) -RRB- cord-277909-rn1dow26 143 26 were be VBD cord-277909-rn1dow26 143 27 contaminated contaminate VBN cord-277909-rn1dow26 143 28 with with IN cord-277909-rn1dow26 143 29 the the DT cord-277909-rn1dow26 143 30 previously previously RB cord-277909-rn1dow26 143 31 synthesised synthesise VBN cord-277909-rn1dow26 143 32 positive positive JJ cord-277909-rn1dow26 143 33 control control NN cord-277909-rn1dow26 143 34 , , , cord-277909-rn1dow26 143 35 even even RB cord-277909-rn1dow26 143 36 after after IN cord-277909-rn1dow26 143 37 HPLC HPLC NNP cord-277909-rn1dow26 143 38 purification purification NN cord-277909-rn1dow26 143 39 ( ( -LRB- cord-277909-rn1dow26 143 40 3 3 CD cord-277909-rn1dow26 143 41 + + SYM cord-277909-rn1dow26 143 42 4 4 CD cord-277909-rn1dow26 143 43 ) ) -RRB- cord-277909-rn1dow26 143 44 . . . cord-277909-rn1dow26 144 1 specificity specificity NN cord-277909-rn1dow26 144 2 . . . cord-277909-rn1dow26 145 1 Serial serial JJ cord-277909-rn1dow26 145 2 dilution dilution NN cord-277909-rn1dow26 145 3 series series NN cord-277909-rn1dow26 145 4 of of IN cord-277909-rn1dow26 145 5 known know VBN cord-277909-rn1dow26 145 6 positive positive JJ cord-277909-rn1dow26 145 7 samples sample NNS cord-277909-rn1dow26 145 8 may may MD cord-277909-rn1dow26 145 9 also also RB cord-277909-rn1dow26 145 10 be be VB cord-277909-rn1dow26 145 11 prepared prepare VBN cord-277909-rn1dow26 145 12 , , , cord-277909-rn1dow26 145 13 and and CC cord-277909-rn1dow26 145 14 tested test VBN cord-277909-rn1dow26 145 15 in in IN cord-277909-rn1dow26 145 16 parallel parallel NN cord-277909-rn1dow26 145 17 in in IN cord-277909-rn1dow26 145 18 the the DT cord-277909-rn1dow26 145 19 new new JJ cord-277909-rn1dow26 145 20 and and CC cord-277909-rn1dow26 145 21 previous previous JJ cord-277909-rn1dow26 145 22 assay assay NN cord-277909-rn1dow26 145 23 systems system NNS cord-277909-rn1dow26 145 24 to to TO cord-277909-rn1dow26 145 25 determine determine VB cord-277909-rn1dow26 145 26 which which WDT cord-277909-rn1dow26 145 27 assay assay NN cord-277909-rn1dow26 145 28 is be VBZ cord-277909-rn1dow26 145 29 more more RBR cord-277909-rn1dow26 145 30 sensitive sensitive JJ cord-277909-rn1dow26 145 31 . . . cord-277909-rn1dow26 146 1 Ideally ideally RB cord-277909-rn1dow26 146 2 these these DT cord-277909-rn1dow26 146 3 dilution dilution NN cord-277909-rn1dow26 146 4 panels panel NNS cord-277909-rn1dow26 146 5 should should MD cord-277909-rn1dow26 146 6 represent represent VB cord-277909-rn1dow26 146 7 all all DT cord-277909-rn1dow26 146 8 subgroups subgroup NNS cord-277909-rn1dow26 146 9 of of IN cord-277909-rn1dow26 146 10 the the DT cord-277909-rn1dow26 146 11 target target NN cord-277909-rn1dow26 146 12 virus virus NN cord-277909-rn1dow26 146 13 to to TO cord-277909-rn1dow26 146 14 ensure ensure VB cord-277909-rn1dow26 146 15 the the DT cord-277909-rn1dow26 146 16 test test NN cord-277909-rn1dow26 146 17 is be VBZ cord-277909-rn1dow26 146 18 sensitive sensitive JJ cord-277909-rn1dow26 146 19 for for IN cord-277909-rn1dow26 146 20 all all DT cord-277909-rn1dow26 146 21 types type NNS cord-277909-rn1dow26 146 22 . . . cord-277909-rn1dow26 147 1 A a DT cord-277909-rn1dow26 147 2 new new JJ cord-277909-rn1dow26 147 3 test test NN cord-277909-rn1dow26 147 4 must must MD cord-277909-rn1dow26 147 5 be be VB cord-277909-rn1dow26 147 6 at at RB cord-277909-rn1dow26 147 7 least least JJS cord-277909-rn1dow26 147 8 as as RB cord-277909-rn1dow26 147 9 sensitive sensitive JJ cord-277909-rn1dow26 147 10 as as IN cord-277909-rn1dow26 147 11 the the DT cord-277909-rn1dow26 147 12 assay assay NN cord-277909-rn1dow26 147 13 in in IN cord-277909-rn1dow26 147 14 current current JJ cord-277909-rn1dow26 147 15 use use NN cord-277909-rn1dow26 147 16 , , , cord-277909-rn1dow26 147 17 and and CC cord-277909-rn1dow26 147 18 should should MD cord-277909-rn1dow26 147 19 ideally ideally RB cord-277909-rn1dow26 147 20 be be VB cord-277909-rn1dow26 147 21 able able JJ cord-277909-rn1dow26 147 22 to to TO cord-277909-rn1dow26 147 23 detect detect VB cord-277909-rn1dow26 147 24 a a DT cord-277909-rn1dow26 147 25 wider wide JJR cord-277909-rn1dow26 147 26 range range NN cord-277909-rn1dow26 147 27 of of IN cord-277909-rn1dow26 147 28 virus virus NN cord-277909-rn1dow26 147 29 subtypes subtype NNS cord-277909-rn1dow26 147 30 / / SYM cord-277909-rn1dow26 147 31 variants variant NNS cord-277909-rn1dow26 147 32 . . . cord-277909-rn1dow26 148 1 An an DT cord-277909-rn1dow26 148 2 additional additional JJ cord-277909-rn1dow26 148 3 method method NN cord-277909-rn1dow26 148 4 to to TO cord-277909-rn1dow26 148 5 validate validate VB cord-277909-rn1dow26 148 6 a a DT cord-277909-rn1dow26 148 7 new new JJ cord-277909-rn1dow26 148 8 assay assay NN cord-277909-rn1dow26 148 9 is be VBZ cord-277909-rn1dow26 148 10 to to TO cord-277909-rn1dow26 148 11 test test VB cord-277909-rn1dow26 148 12 the the DT cord-277909-rn1dow26 148 13 assay assay NN cord-277909-rn1dow26 148 14 using use VBG cord-277909-rn1dow26 148 15 samples sample NNS cord-277909-rn1dow26 148 16 from from IN cord-277909-rn1dow26 148 17 an an DT cord-277909-rn1dow26 148 18 external external JJ cord-277909-rn1dow26 148 19 quality quality NN cord-277909-rn1dow26 148 20 assurance assurance NN cord-277909-rn1dow26 148 21 program program NN cord-277909-rn1dow26 148 22 . . . cord-277909-rn1dow26 149 1 Panels panel NNS cord-277909-rn1dow26 149 2 may may MD cord-277909-rn1dow26 149 3 be be VB cord-277909-rn1dow26 149 4 obtained obtain VBN cord-277909-rn1dow26 149 5 from from IN cord-277909-rn1dow26 149 6 various various JJ cord-277909-rn1dow26 149 7 sources source NNS cord-277909-rn1dow26 149 8 , , , cord-277909-rn1dow26 149 9 including include VBG cord-277909-rn1dow26 149 10 National National NNP cord-277909-rn1dow26 149 11 External External NNP cord-277909-rn1dow26 149 12 Quality Quality NNP cord-277909-rn1dow26 149 13 Assessment Assessment NNP cord-277909-rn1dow26 149 14 Service Service NNP cord-277909-rn1dow26 149 15 ( ( -LRB- cord-277909-rn1dow26 149 16 NEQAS NEQAS NNP cord-277909-rn1dow26 149 17 ) ) -RRB- cord-277909-rn1dow26 149 18 and and CC cord-277909-rn1dow26 149 19 Quality Quality NNP cord-277909-rn1dow26 149 20 Control Control NNP cord-277909-rn1dow26 149 21 for for IN cord-277909-rn1dow26 149 22 Molecular Molecular NNP cord-277909-rn1dow26 149 23 Diagnostics Diagnostics NNP cord-277909-rn1dow26 149 24 ( ( -LRB- cord-277909-rn1dow26 149 25 QCMD QCMD NNP cord-277909-rn1dow26 149 26 ) ) -RRB- cord-277909-rn1dow26 149 27 , , , cord-277909-rn1dow26 149 28 and and CC cord-277909-rn1dow26 149 29 the the DT cord-277909-rn1dow26 149 30 expected expect VBN cord-277909-rn1dow26 149 31 results result NNS cord-277909-rn1dow26 149 32 may may MD cord-277909-rn1dow26 149 33 be be VB cord-277909-rn1dow26 149 34 compared compare VBN cord-277909-rn1dow26 149 35 with with IN cord-277909-rn1dow26 149 36 those those DT cord-277909-rn1dow26 149 37 obtained obtain VBN cord-277909-rn1dow26 149 38 from from IN cord-277909-rn1dow26 149 39 the the DT cord-277909-rn1dow26 149 40 old old JJ cord-277909-rn1dow26 149 41 and and CC cord-277909-rn1dow26 149 42 new new JJ cord-277909-rn1dow26 149 43 assays assay NNS cord-277909-rn1dow26 149 44 in in IN cord-277909-rn1dow26 149 45 parallel parallel NN cord-277909-rn1dow26 149 46 . . . cord-277909-rn1dow26 150 1 The the DT cord-277909-rn1dow26 150 2 use use NN cord-277909-rn1dow26 150 3 of of IN cord-277909-rn1dow26 150 4 such such JJ cord-277909-rn1dow26 150 5 panels panel NNS cord-277909-rn1dow26 150 6 also also RB cord-277909-rn1dow26 150 7 allows allow VBZ cord-277909-rn1dow26 150 8 the the DT cord-277909-rn1dow26 150 9 comparison comparison NN cord-277909-rn1dow26 150 10 of of IN cord-277909-rn1dow26 150 11 assays assay NNS cord-277909-rn1dow26 150 12 currently currently RB cord-277909-rn1dow26 150 13 in in IN cord-277909-rn1dow26 150 14 use use NN cord-277909-rn1dow26 150 15 by by IN cord-277909-rn1dow26 150 16 different different JJ cord-277909-rn1dow26 150 17 laboratories laboratory NNS cord-277909-rn1dow26 150 18 . . . cord-277909-rn1dow26 151 1 When when WRB cord-277909-rn1dow26 151 2 implementing implement VBG cord-277909-rn1dow26 151 3 a a DT cord-277909-rn1dow26 151 4 newly newly RB cord-277909-rn1dow26 151 5 designed design VBN cord-277909-rn1dow26 151 6 or or CC cord-277909-rn1dow26 151 7 previously previously RB cord-277909-rn1dow26 151 8 published publish VBN cord-277909-rn1dow26 151 9 assay assay NN cord-277909-rn1dow26 151 10 a a DT cord-277909-rn1dow26 151 11 number number NN cord-277909-rn1dow26 151 12 of of IN cord-277909-rn1dow26 151 13 changes change NNS cord-277909-rn1dow26 151 14 can can MD cord-277909-rn1dow26 151 15 be be VB cord-277909-rn1dow26 151 16 made make VBN cord-277909-rn1dow26 151 17 in in IN cord-277909-rn1dow26 151 18 order order NN cord-277909-rn1dow26 151 19 to to TO cord-277909-rn1dow26 151 20 reduce reduce VB cord-277909-rn1dow26 151 21 the the DT cord-277909-rn1dow26 151 22 turn turn NN cord-277909-rn1dow26 151 23 around around IN cord-277909-rn1dow26 151 24 time time NN cord-277909-rn1dow26 151 25 of of IN cord-277909-rn1dow26 151 26 the the DT cord-277909-rn1dow26 151 27 assay assay NN cord-277909-rn1dow26 151 28 and and CC cord-277909-rn1dow26 151 29 increase increase VB cord-277909-rn1dow26 151 30 laboratory laboratory NN cord-277909-rn1dow26 151 31 throughput throughput NN cord-277909-rn1dow26 151 32 . . . cord-277909-rn1dow26 152 1 Multiplex multiplex JJ cord-277909-rn1dow26 152 2 real real JJ cord-277909-rn1dow26 152 3 time time NN cord-277909-rn1dow26 152 4 PCR pcr NN cord-277909-rn1dow26 152 5 assays assay NNS cord-277909-rn1dow26 152 6 allow allow VBP cord-277909-rn1dow26 152 7 the the DT cord-277909-rn1dow26 152 8 detection detection NN cord-277909-rn1dow26 152 9 of of IN cord-277909-rn1dow26 152 10 multiple multiple JJ cord-277909-rn1dow26 152 11 pathogens pathogen NNS cord-277909-rn1dow26 152 12 within within IN cord-277909-rn1dow26 152 13 a a DT cord-277909-rn1dow26 152 14 single single JJ cord-277909-rn1dow26 152 15 tube tube NN cord-277909-rn1dow26 152 16 . . . cord-277909-rn1dow26 153 1 The the DT cord-277909-rn1dow26 153 2 utilisation utilisation NN cord-277909-rn1dow26 153 3 of of IN cord-277909-rn1dow26 153 4 such such JJ cord-277909-rn1dow26 153 5 assays assay NNS cord-277909-rn1dow26 153 6 reduces reduce VBZ cord-277909-rn1dow26 153 7 overall overall JJ cord-277909-rn1dow26 153 8 testing testing NN cord-277909-rn1dow26 153 9 costs cost NNS cord-277909-rn1dow26 153 10 and and CC cord-277909-rn1dow26 153 11 turn turn VB cord-277909-rn1dow26 153 12 around around RP cord-277909-rn1dow26 153 13 times time NNS cord-277909-rn1dow26 153 14 , , , cord-277909-rn1dow26 153 15 enabling enable VBG cord-277909-rn1dow26 153 16 a a DT cord-277909-rn1dow26 153 17 high high JJ cord-277909-rn1dow26 153 18 throughput throughput NN cord-277909-rn1dow26 153 19 . . . cord-277909-rn1dow26 154 1 There there EX cord-277909-rn1dow26 154 2 are be VBP cord-277909-rn1dow26 154 3 a a DT cord-277909-rn1dow26 154 4 number number NN cord-277909-rn1dow26 154 5 of of IN cord-277909-rn1dow26 154 6 multiplex multiplex JJ cord-277909-rn1dow26 154 7 real real JJ cord-277909-rn1dow26 154 8 time time NN cord-277909-rn1dow26 154 9 PCR PCR NNP cord-277909-rn1dow26 154 10 assays assay NNS cord-277909-rn1dow26 154 11 described describe VBN cord-277909-rn1dow26 154 12 in in IN cord-277909-rn1dow26 154 13 the the DT cord-277909-rn1dow26 154 14 literature literature NN cord-277909-rn1dow26 154 15 ( ( -LRB- cord-277909-rn1dow26 154 16 Draganov Draganov NNP cord-277909-rn1dow26 154 17 and and CC cord-277909-rn1dow26 154 18 Kulvachev Kulvachev NNP cord-277909-rn1dow26 154 19 , , , cord-277909-rn1dow26 154 20 2004 2004 CD cord-277909-rn1dow26 154 21 ; ; : cord-277909-rn1dow26 155 1 Gunson Gunson NNP cord-277909-rn1dow26 155 2 et et FW cord-277909-rn1dow26 155 3 al al NNP cord-277909-rn1dow26 155 4 . . . cord-277909-rn1dow26 156 1 , , , cord-277909-rn1dow26 156 2 2005 2005 CD cord-277909-rn1dow26 156 3 ; ; : cord-277909-rn1dow26 156 4 Hindiyeh Hindiyeh NNP cord-277909-rn1dow26 156 5 et et NNP cord-277909-rn1dow26 156 6 al al NNP cord-277909-rn1dow26 156 7 . . NNP cord-277909-rn1dow26 156 8 , , , cord-277909-rn1dow26 156 9 2001 2001 CD cord-277909-rn1dow26 156 10 ; ; : cord-277909-rn1dow26 156 11 Richards Richards NNP cord-277909-rn1dow26 156 12 et et NNP cord-277909-rn1dow26 156 13 al al NNP cord-277909-rn1dow26 156 14 . . NNP cord-277909-rn1dow26 156 15 , , , cord-277909-rn1dow26 156 16 2004 2004 CD cord-277909-rn1dow26 156 17 ; ; : cord-277909-rn1dow26 156 18 Templeton Templeton NNP cord-277909-rn1dow26 156 19 et et NNP cord-277909-rn1dow26 156 20 al al NNP cord-277909-rn1dow26 156 21 . . NNP cord-277909-rn1dow26 156 22 , , , cord-277909-rn1dow26 156 23 2004 2004 CD cord-277909-rn1dow26 156 24 ) ) -RRB- cord-277909-rn1dow26 156 25 . . . cord-277909-rn1dow26 157 1 We -PRON- PRP cord-277909-rn1dow26 157 2 recently recently RB cord-277909-rn1dow26 157 3 described describe VBD cord-277909-rn1dow26 157 4 4 4 CD cord-277909-rn1dow26 157 5 triplex triplex NN cord-277909-rn1dow26 157 6 assays assay NNS cord-277909-rn1dow26 157 7 designed design VBN cord-277909-rn1dow26 157 8 to to TO cord-277909-rn1dow26 157 9 detect detect VB cord-277909-rn1dow26 157 10 12 12 CD cord-277909-rn1dow26 157 11 respiratory respiratory JJ cord-277909-rn1dow26 157 12 viral viral JJ cord-277909-rn1dow26 157 13 pathogens pathogen NNS cord-277909-rn1dow26 157 14 . . . cord-277909-rn1dow26 158 1 Designing design VBG cord-277909-rn1dow26 158 2 a a DT cord-277909-rn1dow26 158 3 multiplex multiplex JJ cord-277909-rn1dow26 158 4 real real JJ cord-277909-rn1dow26 158 5 time time NN cord-277909-rn1dow26 158 6 PCR PCR NNP cord-277909-rn1dow26 158 7 is be VBZ cord-277909-rn1dow26 158 8 a a DT cord-277909-rn1dow26 158 9 complicated complicated JJ cord-277909-rn1dow26 158 10 process process NN cord-277909-rn1dow26 158 11 often often RB cord-277909-rn1dow26 158 12 requiring require VBG cord-277909-rn1dow26 158 13 a a DT cord-277909-rn1dow26 158 14 great great JJ cord-277909-rn1dow26 158 15 deal deal NN cord-277909-rn1dow26 158 16 of of IN cord-277909-rn1dow26 158 17 trial trial NN cord-277909-rn1dow26 158 18 and and CC cord-277909-rn1dow26 158 19 error error NN cord-277909-rn1dow26 158 20 . . . cord-277909-rn1dow26 159 1 Below below RB cord-277909-rn1dow26 159 2 are be VBP cord-277909-rn1dow26 159 3 outlined outline VBN cord-277909-rn1dow26 159 4 some some DT cord-277909-rn1dow26 159 5 general general JJ cord-277909-rn1dow26 159 6 criteria criterion NNS cord-277909-rn1dow26 159 7 that that WDT cord-277909-rn1dow26 159 8 may may MD cord-277909-rn1dow26 159 9 prove prove VB cord-277909-rn1dow26 159 10 useful useful JJ cord-277909-rn1dow26 159 11 when when WRB cord-277909-rn1dow26 159 12 designing design VBG cord-277909-rn1dow26 159 13 such such JJ cord-277909-rn1dow26 159 14 assays assay NNS cord-277909-rn1dow26 159 15 . . . cord-277909-rn1dow26 160 1 In in IN cord-277909-rn1dow26 160 2 order order NN cord-277909-rn1dow26 160 3 to to TO cord-277909-rn1dow26 160 4 design design VB cord-277909-rn1dow26 160 5 appropriate appropriate JJ cord-277909-rn1dow26 160 6 primers primer NNS cord-277909-rn1dow26 160 7 and and CC cord-277909-rn1dow26 160 8 probes probe NNS cord-277909-rn1dow26 160 9 users user NNS cord-277909-rn1dow26 160 10 should should MD cord-277909-rn1dow26 160 11 follow follow VB cord-277909-rn1dow26 160 12 the the DT cord-277909-rn1dow26 160 13 development development NN cord-277909-rn1dow26 160 14 protocols protocol NNS cord-277909-rn1dow26 160 15 outlined outline VBN cord-277909-rn1dow26 160 16 above above RB cord-277909-rn1dow26 160 17 . . . cord-277909-rn1dow26 161 1 However however RB cord-277909-rn1dow26 161 2 , , , cord-277909-rn1dow26 161 3 care care NN cord-277909-rn1dow26 161 4 should should MD cord-277909-rn1dow26 161 5 be be VB cord-277909-rn1dow26 161 6 taken take VBN cord-277909-rn1dow26 161 7 to to TO cord-277909-rn1dow26 161 8 ensure ensure VB cord-277909-rn1dow26 161 9 that that IN cord-277909-rn1dow26 161 10 there there EX cord-277909-rn1dow26 161 11 is be VBZ cord-277909-rn1dow26 161 12 no no DT cord-277909-rn1dow26 161 13 primer primer NN cord-277909-rn1dow26 161 14 or or CC cord-277909-rn1dow26 161 15 probe probe NN cord-277909-rn1dow26 161 16 interaction interaction NN cord-277909-rn1dow26 161 17 that that WDT cord-277909-rn1dow26 161 18 may may MD cord-277909-rn1dow26 161 19 reduce reduce VB cord-277909-rn1dow26 161 20 the the DT cord-277909-rn1dow26 161 21 sensitivity sensitivity NN cord-277909-rn1dow26 161 22 or or CC cord-277909-rn1dow26 161 23 efficiency efficiency NN cord-277909-rn1dow26 161 24 of of IN cord-277909-rn1dow26 161 25 the the DT cord-277909-rn1dow26 161 26 PCR PCR NNP cord-277909-rn1dow26 161 27 reaction reaction NN cord-277909-rn1dow26 161 28 . . . cord-277909-rn1dow26 162 1 Most Most JJS cord-277909-rn1dow26 162 2 primer primer NN cord-277909-rn1dow26 162 3 design design NN cord-277909-rn1dow26 162 4 software software NN cord-277909-rn1dow26 162 5 will will MD cord-277909-rn1dow26 162 6 allow allow VB cord-277909-rn1dow26 162 7 primer primer NN cord-277909-rn1dow26 162 8 - - HYPH cord-277909-rn1dow26 162 9 probe probe NN cord-277909-rn1dow26 162 10 interactions interaction NNS cord-277909-rn1dow26 162 11 to to TO cord-277909-rn1dow26 162 12 be be VB cord-277909-rn1dow26 162 13 examined examine VBN cord-277909-rn1dow26 162 14 . . . cord-277909-rn1dow26 163 1 In in IN cord-277909-rn1dow26 163 2 order order NN cord-277909-rn1dow26 163 3 to to TO cord-277909-rn1dow26 163 4 optimise optimise VB cord-277909-rn1dow26 163 5 the the DT cord-277909-rn1dow26 163 6 multiplex multiplex NN cord-277909-rn1dow26 163 7 assay assay NN cord-277909-rn1dow26 163 8 each each DT cord-277909-rn1dow26 163 9 separate separate JJ cord-277909-rn1dow26 163 10 PCR pcr NN cord-277909-rn1dow26 163 11 should should MD cord-277909-rn1dow26 163 12 be be VB cord-277909-rn1dow26 163 13 optimised optimise VBN cord-277909-rn1dow26 163 14 separately separately RB cord-277909-rn1dow26 163 15 before before IN cord-277909-rn1dow26 163 16 being be VBG cord-277909-rn1dow26 163 17 assessed assess VBN cord-277909-rn1dow26 163 18 when when WRB cord-277909-rn1dow26 163 19 added add VBN cord-277909-rn1dow26 163 20 together together RB cord-277909-rn1dow26 163 21 ( ( -LRB- cord-277909-rn1dow26 163 22 see see VB cord-277909-rn1dow26 163 23 above above IN cord-277909-rn1dow26 163 24 section section NN cord-277909-rn1dow26 163 25 for for IN cord-277909-rn1dow26 163 26 details detail NNS cord-277909-rn1dow26 163 27 ) ) -RRB- cord-277909-rn1dow26 163 28 . . . cord-277909-rn1dow26 164 1 Further further JJ cord-277909-rn1dow26 164 2 experiments experiment NNS cord-277909-rn1dow26 164 3 should should MD cord-277909-rn1dow26 164 4 include include VB cord-277909-rn1dow26 164 5 assessing assess VBG cord-277909-rn1dow26 164 6 the the DT cord-277909-rn1dow26 164 7 sensitivity sensitivity NN cord-277909-rn1dow26 164 8 of of IN cord-277909-rn1dow26 164 9 the the DT cord-277909-rn1dow26 164 10 multiplex multiplex JJ cord-277909-rn1dow26 164 11 assay assay NN cord-277909-rn1dow26 164 12 for for IN cord-277909-rn1dow26 164 13 the the DT cord-277909-rn1dow26 164 14 simultaneous simultaneous JJ cord-277909-rn1dow26 164 15 detection detection NN cord-277909-rn1dow26 164 16 of of IN cord-277909-rn1dow26 164 17 mixed mixed JJ cord-277909-rn1dow26 164 18 infections infection NNS cord-277909-rn1dow26 164 19 ( ( -LRB- cord-277909-rn1dow26 164 20 real real JJ cord-277909-rn1dow26 164 21 or or CC cord-277909-rn1dow26 164 22 spiked spiked JJ cord-277909-rn1dow26 164 23 ) ) -RRB- cord-277909-rn1dow26 164 24 and and CC cord-277909-rn1dow26 164 25 low low JJ cord-277909-rn1dow26 164 26 copy copy NN cord-277909-rn1dow26 164 27 targets target NNS cord-277909-rn1dow26 164 28 in in IN cord-277909-rn1dow26 164 29 high high JJ cord-277909-rn1dow26 164 30 copy copy NN cord-277909-rn1dow26 164 31 backgrounds background NNS cord-277909-rn1dow26 164 32 . . . cord-277909-rn1dow26 165 1 Ideally ideally RB cord-277909-rn1dow26 165 2 , , , cord-277909-rn1dow26 165 3 no no DT cord-277909-rn1dow26 165 4 loss loss NN cord-277909-rn1dow26 165 5 in in IN cord-277909-rn1dow26 165 6 sensitivity sensitivity NN cord-277909-rn1dow26 165 7 should should MD cord-277909-rn1dow26 165 8 be be VB cord-277909-rn1dow26 165 9 observed observe VBN cord-277909-rn1dow26 165 10 when when WRB cord-277909-rn1dow26 165 11 additional additional JJ cord-277909-rn1dow26 165 12 primers primer NNS cord-277909-rn1dow26 165 13 are be VBP cord-277909-rn1dow26 165 14 added add VBN cord-277909-rn1dow26 165 15 . . . cord-277909-rn1dow26 166 1 However however RB cord-277909-rn1dow26 166 2 , , , cord-277909-rn1dow26 166 3 if if IN cord-277909-rn1dow26 166 4 the the DT cord-277909-rn1dow26 166 5 multiplex multiplex JJ cord-277909-rn1dow26 166 6 assay assay NN cord-277909-rn1dow26 166 7 is be VBZ cord-277909-rn1dow26 166 8 less less RBR cord-277909-rn1dow26 166 9 sensitive sensitive JJ cord-277909-rn1dow26 166 10 , , , cord-277909-rn1dow26 166 11 altering alter VBG cord-277909-rn1dow26 166 12 the the DT cord-277909-rn1dow26 166 13 ratio ratio NN cord-277909-rn1dow26 166 14 of of IN cord-277909-rn1dow26 166 15 primers primer NNS cord-277909-rn1dow26 166 16 / / SYM cord-277909-rn1dow26 166 17 probes probe NNS cord-277909-rn1dow26 166 18 concentrations concentration NNS cord-277909-rn1dow26 166 19 may may MD cord-277909-rn1dow26 166 20 prove prove VB cord-277909-rn1dow26 166 21 useful useful JJ cord-277909-rn1dow26 166 22 . . . cord-277909-rn1dow26 167 1 Alternatively alternatively RB cord-277909-rn1dow26 167 2 , , , cord-277909-rn1dow26 167 3 changing change VBG cord-277909-rn1dow26 167 4 the the DT cord-277909-rn1dow26 167 5 concentration concentration NN cord-277909-rn1dow26 167 6 of of IN cord-277909-rn1dow26 167 7 PCR PCR NNP cord-277909-rn1dow26 167 8 reagents reagent NNS cord-277909-rn1dow26 167 9 ( ( -LRB- cord-277909-rn1dow26 167 10 enzyme enzyme NN cord-277909-rn1dow26 167 11 , , , cord-277909-rn1dow26 167 12 Mg Mg NNP cord-277909-rn1dow26 167 13 2 2 CD cord-277909-rn1dow26 167 14 + + SYM cord-277909-rn1dow26 167 15 , , , cord-277909-rn1dow26 167 16 dNTPs dNTPs NNP cord-277909-rn1dow26 167 17 etc etc FW cord-277909-rn1dow26 167 18 . . . cord-277909-rn1dow26 167 19 ) ) -RRB- cord-277909-rn1dow26 167 20 may may MD cord-277909-rn1dow26 167 21 also also RB cord-277909-rn1dow26 167 22 be be VB cord-277909-rn1dow26 167 23 beneficial beneficial JJ cord-277909-rn1dow26 167 24 . . . cord-277909-rn1dow26 168 1 Some some DT cord-277909-rn1dow26 168 2 manufacturers manufacturer NNS cord-277909-rn1dow26 168 3 are be VBP cord-277909-rn1dow26 168 4 now now RB cord-277909-rn1dow26 168 5 producing produce VBG cord-277909-rn1dow26 168 6 real real JJ cord-277909-rn1dow26 168 7 time time NN cord-277909-rn1dow26 168 8 reaction reaction NN cord-277909-rn1dow26 168 9 mixes mix NNS cord-277909-rn1dow26 168 10 specifically specifically RB cord-277909-rn1dow26 168 11 designed design VBN cord-277909-rn1dow26 168 12 for for IN cord-277909-rn1dow26 168 13 use use NN cord-277909-rn1dow26 168 14 with with IN cord-277909-rn1dow26 168 15 multiplex multiplex JJ cord-277909-rn1dow26 168 16 assays assay NNS cord-277909-rn1dow26 168 17 , , , cord-277909-rn1dow26 168 18 and and CC cord-277909-rn1dow26 168 19 provide provide VB cord-277909-rn1dow26 168 20 guidelines guideline NNS cord-277909-rn1dow26 168 21 on on IN cord-277909-rn1dow26 168 22 the the DT cord-277909-rn1dow26 168 23 optimal optimal JJ cord-277909-rn1dow26 168 24 primer primer NN cord-277909-rn1dow26 168 25 and and CC cord-277909-rn1dow26 168 26 probe probe VB cord-277909-rn1dow26 168 27 concentrations concentration NNS cord-277909-rn1dow26 168 28 to to TO cord-277909-rn1dow26 168 29 use use VB cord-277909-rn1dow26 168 30 . . . cord-277909-rn1dow26 169 1 However however RB cord-277909-rn1dow26 169 2 , , , cord-277909-rn1dow26 169 3 if if IN cord-277909-rn1dow26 169 4 all all PDT cord-277909-rn1dow26 169 5 these these DT cord-277909-rn1dow26 169 6 factors factor NNS cord-277909-rn1dow26 169 7 fail fail VBP cord-277909-rn1dow26 169 8 to to TO cord-277909-rn1dow26 169 9 improve improve VB cord-277909-rn1dow26 169 10 the the DT cord-277909-rn1dow26 169 11 sensitivity sensitivity NN cord-277909-rn1dow26 169 12 of of IN cord-277909-rn1dow26 169 13 the the DT cord-277909-rn1dow26 169 14 multiplex multiplex JJ cord-277909-rn1dow26 169 15 assay assay NN cord-277909-rn1dow26 169 16 then then RB cord-277909-rn1dow26 169 17 some some DT cord-277909-rn1dow26 169 18 or or CC cord-277909-rn1dow26 169 19 all all DT cord-277909-rn1dow26 169 20 of of IN cord-277909-rn1dow26 169 21 the the DT cord-277909-rn1dow26 169 22 primer primer NN cord-277909-rn1dow26 169 23 and and CC cord-277909-rn1dow26 169 24 probes probe NNS cord-277909-rn1dow26 169 25 may may MD cord-277909-rn1dow26 169 26 have have VB cord-277909-rn1dow26 169 27 to to TO cord-277909-rn1dow26 169 28 be be VB cord-277909-rn1dow26 169 29 redesigned redesign VBN cord-277909-rn1dow26 169 30 . . . cord-277909-rn1dow26 170 1 The the DT cord-277909-rn1dow26 170 2 number number NN cord-277909-rn1dow26 170 3 of of IN cord-277909-rn1dow26 170 4 targets target NNS cord-277909-rn1dow26 170 5 detected detect VBN cord-277909-rn1dow26 170 6 in in IN cord-277909-rn1dow26 170 7 one one CD cord-277909-rn1dow26 170 8 assay assay NN cord-277909-rn1dow26 170 9 is be VBZ cord-277909-rn1dow26 170 10 limited limit VBN cord-277909-rn1dow26 170 11 by by IN cord-277909-rn1dow26 170 12 the the DT cord-277909-rn1dow26 170 13 number number NN cord-277909-rn1dow26 170 14 of of IN cord-277909-rn1dow26 170 15 detection detection NN cord-277909-rn1dow26 170 16 channels channel NNS cord-277909-rn1dow26 170 17 available available JJ cord-277909-rn1dow26 170 18 on on IN cord-277909-rn1dow26 170 19 the the DT cord-277909-rn1dow26 170 20 real real JJ cord-277909-rn1dow26 170 21 time time NN cord-277909-rn1dow26 170 22 platform platform NN cord-277909-rn1dow26 170 23 and and CC cord-277909-rn1dow26 170 24 the the DT cord-277909-rn1dow26 170 25 number number NN cord-277909-rn1dow26 170 26 of of IN cord-277909-rn1dow26 170 27 fluorescent fluorescent NN cord-277909-rn1dow26 170 28 - - HYPH cord-277909-rn1dow26 170 29 labelled label VBN cord-277909-rn1dow26 170 30 dyes dye NNS cord-277909-rn1dow26 170 31 available available JJ cord-277909-rn1dow26 170 32 . . . cord-277909-rn1dow26 171 1 Newer newer JJ cord-277909-rn1dow26 171 2 machines machine NNS cord-277909-rn1dow26 171 3 tend tend VBP cord-277909-rn1dow26 171 4 to to TO cord-277909-rn1dow26 171 5 have have VB cord-277909-rn1dow26 171 6 five five CD cord-277909-rn1dow26 171 7 channels channel NNS cord-277909-rn1dow26 171 8 . . . cord-277909-rn1dow26 172 1 Although although IN cord-277909-rn1dow26 172 2 there there EX cord-277909-rn1dow26 172 3 are be VBP cord-277909-rn1dow26 172 4 many many JJ cord-277909-rn1dow26 172 5 fluorescent fluorescent JJ cord-277909-rn1dow26 172 6 dyes dye NNS cord-277909-rn1dow26 172 7 available available JJ cord-277909-rn1dow26 172 8 , , , cord-277909-rn1dow26 172 9 many many JJ cord-277909-rn1dow26 172 10 of of IN cord-277909-rn1dow26 172 11 the the DT cord-277909-rn1dow26 172 12 excitation excitation NN cord-277909-rn1dow26 172 13 / / SYM cord-277909-rn1dow26 172 14 emission emission NN cord-277909-rn1dow26 172 15 spectra spectrum NNS cord-277909-rn1dow26 172 16 overlap overlap VBP cord-277909-rn1dow26 172 17 and and CC cord-277909-rn1dow26 172 18 thus thus RB cord-277909-rn1dow26 172 19 only only RB cord-277909-rn1dow26 172 20 certain certain JJ cord-277909-rn1dow26 172 21 combinations combination NNS cord-277909-rn1dow26 172 22 can can MD cord-277909-rn1dow26 172 23 be be VB cord-277909-rn1dow26 172 24 used use VBN cord-277909-rn1dow26 172 25 . . . cord-277909-rn1dow26 173 1 At at IN cord-277909-rn1dow26 173 2 present present JJ cord-277909-rn1dow26 173 3 we -PRON- PRP cord-277909-rn1dow26 173 4 are be VBP cord-277909-rn1dow26 173 5 using use VBG cord-277909-rn1dow26 173 6 FAM FAM NNP cord-277909-rn1dow26 173 7 , , , cord-277909-rn1dow26 173 8 VIC VIC NNP cord-277909-rn1dow26 173 9 , , , cord-277909-rn1dow26 173 10 and and CC cord-277909-rn1dow26 173 11 Cy5 cy5 NN cord-277909-rn1dow26 173 12 detectors detector NNS cord-277909-rn1dow26 173 13 as as IN cord-277909-rn1dow26 173 14 these these DT cord-277909-rn1dow26 173 15 are be VBP cord-277909-rn1dow26 173 16 optimal optimal JJ cord-277909-rn1dow26 173 17 for for IN cord-277909-rn1dow26 173 18 the the DT cord-277909-rn1dow26 173 19 filter filter NN cord-277909-rn1dow26 173 20 set set VBN cord-277909-rn1dow26 173 21 utilised utilise VBN cord-277909-rn1dow26 173 22 in in IN cord-277909-rn1dow26 173 23 the the DT cord-277909-rn1dow26 173 24 ABI ABI NNP cord-277909-rn1dow26 173 25 7500 7500 CD cord-277909-rn1dow26 174 1 ( ( -LRB- cord-277909-rn1dow26 174 2 please please UH cord-277909-rn1dow26 174 3 note note VB cord-277909-rn1dow26 174 4 that that IN cord-277909-rn1dow26 174 5 this this DT cord-277909-rn1dow26 174 6 may may MD cord-277909-rn1dow26 174 7 differ differ VB cord-277909-rn1dow26 174 8 when when WRB cord-277909-rn1dow26 174 9 using use VBG cord-277909-rn1dow26 174 10 other other JJ cord-277909-rn1dow26 174 11 platforms platform NNS cord-277909-rn1dow26 174 12 ) ) -RRB- cord-277909-rn1dow26 174 13 . . . cord-277909-rn1dow26 175 1 Syndrome syndrome NN cord-277909-rn1dow26 175 2 based base VBN cord-277909-rn1dow26 175 3 testing testing NN cord-277909-rn1dow26 175 4 policies policy NNS cord-277909-rn1dow26 175 5 are be VBP cord-277909-rn1dow26 175 6 ideal ideal JJ cord-277909-rn1dow26 175 7 for for IN cord-277909-rn1dow26 175 8 rapid rapid JJ cord-277909-rn1dow26 175 9 , , , cord-277909-rn1dow26 175 10 high high JJ cord-277909-rn1dow26 175 11 throughput throughput NN cord-277909-rn1dow26 175 12 testing testing NN cord-277909-rn1dow26 175 13 . . . cord-277909-rn1dow26 176 1 In in IN cord-277909-rn1dow26 176 2 our -PRON- PRP$ cord-277909-rn1dow26 176 3 laboratory laboratory NN cord-277909-rn1dow26 176 4 we -PRON- PRP cord-277909-rn1dow26 176 5 offer offer VBP cord-277909-rn1dow26 176 6 a a DT cord-277909-rn1dow26 176 7 number number NN cord-277909-rn1dow26 176 8 of of IN cord-277909-rn1dow26 176 9 such such JJ cord-277909-rn1dow26 176 10 " " `` cord-277909-rn1dow26 176 11 menus menu NNS cord-277909-rn1dow26 176 12 " " '' cord-277909-rn1dow26 176 13 , , , cord-277909-rn1dow26 176 14 which which WDT cord-277909-rn1dow26 176 15 negate negate VBP cord-277909-rn1dow26 176 16 the the DT cord-277909-rn1dow26 176 17 need need NN cord-277909-rn1dow26 176 18 for for IN cord-277909-rn1dow26 176 19 clinical clinical JJ cord-277909-rn1dow26 176 20 coding coding NN cord-277909-rn1dow26 176 21 and and CC cord-277909-rn1dow26 176 22 allow allow VB cord-277909-rn1dow26 176 23 samples sample NNS cord-277909-rn1dow26 176 24 to to TO cord-277909-rn1dow26 176 25 be be VB cord-277909-rn1dow26 176 26 tested test VBN cord-277909-rn1dow26 176 27 immediately immediately RB cord-277909-rn1dow26 176 28 upon upon IN cord-277909-rn1dow26 176 29 receipt receipt NN cord-277909-rn1dow26 176 30 ( ( -LRB- cord-277909-rn1dow26 176 31 Table Table NNP cord-277909-rn1dow26 176 32 3 3 CD cord-277909-rn1dow26 176 33 ) ) -RRB- cord-277909-rn1dow26 176 34 . . . cord-277909-rn1dow26 177 1 For for IN cord-277909-rn1dow26 177 2 example example NN cord-277909-rn1dow26 177 3 , , , cord-277909-rn1dow26 177 4 all all DT cord-277909-rn1dow26 177 5 CSF CSF NNP cord-277909-rn1dow26 177 6 samples sample NNS cord-277909-rn1dow26 177 7 from from IN cord-277909-rn1dow26 177 8 patients patient NNS cord-277909-rn1dow26 177 9 with with IN cord-277909-rn1dow26 177 10 neurological neurological JJ cord-277909-rn1dow26 177 11 illnesses illness NNS cord-277909-rn1dow26 177 12 such such JJ cord-277909-rn1dow26 177 13 as as IN cord-277909-rn1dow26 177 14 encephalitis encephalitis NN cord-277909-rn1dow26 177 15 or or CC cord-277909-rn1dow26 177 16 meningitis meningitis NN cord-277909-rn1dow26 177 17 are be VBP cord-277909-rn1dow26 177 18 tested test VBN cord-277909-rn1dow26 177 19 for for IN cord-277909-rn1dow26 177 20 enterovirus enterovirus NN cord-277909-rn1dow26 177 21 , , , cord-277909-rn1dow26 177 22 HSV HSV NNP cord-277909-rn1dow26 177 23 ( ( -LRB- cord-277909-rn1dow26 177 24 1 1 CD cord-277909-rn1dow26 177 25 and and CC cord-277909-rn1dow26 177 26 2 2 CD cord-277909-rn1dow26 177 27 ) ) -RRB- cord-277909-rn1dow26 177 28 , , , cord-277909-rn1dow26 177 29 VZV VZV NNP cord-277909-rn1dow26 177 30 , , , cord-277909-rn1dow26 177 31 EBV EBV NNP cord-277909-rn1dow26 177 32 , , , cord-277909-rn1dow26 177 33 CMV CMV NNP cord-277909-rn1dow26 177 34 and and CC cord-277909-rn1dow26 177 35 HHV-6 HHV-6 NNP cord-277909-rn1dow26 177 36 regardless regardless RB cord-277909-rn1dow26 177 37 of of IN cord-277909-rn1dow26 177 38 patient patient JJ cord-277909-rn1dow26 177 39 or or CC cord-277909-rn1dow26 177 40 clinical clinical JJ cord-277909-rn1dow26 177 41 details detail NNS cord-277909-rn1dow26 177 42 . . . cord-277909-rn1dow26 178 1 Similar similar JJ cord-277909-rn1dow26 178 2 testing testing NN cord-277909-rn1dow26 178 3 protocols protocol NNS cord-277909-rn1dow26 178 4 are be VBP cord-277909-rn1dow26 178 5 in in IN cord-277909-rn1dow26 178 6 place place NN cord-277909-rn1dow26 178 7 for for IN cord-277909-rn1dow26 178 8 urethritis urethritis NN cord-277909-rn1dow26 178 9 , , , cord-277909-rn1dow26 178 10 gastroenteritis gastroenteritis NN cord-277909-rn1dow26 178 11 , , , cord-277909-rn1dow26 178 12 respiratory respiratory JJ cord-277909-rn1dow26 178 13 illness illness NN cord-277909-rn1dow26 178 14 and and CC cord-277909-rn1dow26 178 15 eye eye NN cord-277909-rn1dow26 178 16 infections infection NNS cord-277909-rn1dow26 178 17 . . . cord-277909-rn1dow26 179 1 However however RB cord-277909-rn1dow26 179 2 , , , cord-277909-rn1dow26 179 3 although although IN cord-277909-rn1dow26 179 4 such such JJ cord-277909-rn1dow26 179 5 policies policy NNS cord-277909-rn1dow26 179 6 aid aid VBP cord-277909-rn1dow26 179 7 high high JJ cord-277909-rn1dow26 179 8 throughput throughput NN cord-277909-rn1dow26 179 9 and and CC cord-277909-rn1dow26 179 10 reduce reduce VB cord-277909-rn1dow26 179 11 turn turn NN cord-277909-rn1dow26 179 12 around around RP cord-277909-rn1dow26 179 13 times time NNS cord-277909-rn1dow26 179 14 ( ( -LRB- cord-277909-rn1dow26 179 15 sample sample NN cord-277909-rn1dow26 179 16 receipt receipt NN cord-277909-rn1dow26 179 17 until until IN cord-277909-rn1dow26 179 18 when when WRB cord-277909-rn1dow26 179 19 result result NN cord-277909-rn1dow26 179 20 is be VBZ cord-277909-rn1dow26 179 21 ready ready JJ cord-277909-rn1dow26 179 22 ) ) -RRB- cord-277909-rn1dow26 179 23 , , , cord-277909-rn1dow26 179 24 it -PRON- PRP cord-277909-rn1dow26 179 25 should should MD cord-277909-rn1dow26 179 26 be be VB cord-277909-rn1dow26 179 27 noted note VBN cord-277909-rn1dow26 179 28 that that IN cord-277909-rn1dow26 179 29 they -PRON- PRP cord-277909-rn1dow26 179 30 may may MD cord-277909-rn1dow26 179 31 be be VB cord-277909-rn1dow26 179 32 more more RBR cord-277909-rn1dow26 179 33 expensive expensive JJ cord-277909-rn1dow26 179 34 and and CC cord-277909-rn1dow26 179 35 will will MD cord-277909-rn1dow26 179 36 occasionally occasionally RB cord-277909-rn1dow26 179 37 produce produce VB cord-277909-rn1dow26 179 38 results result NNS cord-277909-rn1dow26 179 39 that that WDT cord-277909-rn1dow26 179 40 are be VBP cord-277909-rn1dow26 179 41 difficult difficult JJ cord-277909-rn1dow26 179 42 to to TO cord-277909-rn1dow26 179 43 interpret interpret VB cord-277909-rn1dow26 179 44 , , , cord-277909-rn1dow26 179 45 e.g. e.g. IN cord-277909-rn1dow26 179 46 herpes herpes NN cord-277909-rn1dow26 179 47 viruses virus NNS cord-277909-rn1dow26 179 48 in in IN cord-277909-rn1dow26 179 49 respiratory respiratory JJ cord-277909-rn1dow26 179 50 samples sample NNS cord-277909-rn1dow26 179 51 ( ( -LRB- cord-277909-rn1dow26 179 52 see see VB cord-277909-rn1dow26 179 53 below below RB cord-277909-rn1dow26 179 54 ) ) -RRB- cord-277909-rn1dow26 179 55 . . . cord-277909-rn1dow26 179 56 _SP cord-277909-rn1dow26 180 1 Automation automation NN cord-277909-rn1dow26 180 2 of of IN cord-277909-rn1dow26 180 3 the the DT cord-277909-rn1dow26 180 4 extraction extraction NN cord-277909-rn1dow26 180 5 and and CC cord-277909-rn1dow26 180 6 liquid liquid NN cord-277909-rn1dow26 180 7 handling handling NN cord-277909-rn1dow26 180 8 process process NN cord-277909-rn1dow26 180 9 has have VBZ cord-277909-rn1dow26 180 10 led lead VBN cord-277909-rn1dow26 180 11 to to IN cord-277909-rn1dow26 180 12 significant significant JJ cord-277909-rn1dow26 180 13 improvements improvement NNS cord-277909-rn1dow26 180 14 in in IN cord-277909-rn1dow26 180 15 turn turn NN cord-277909-rn1dow26 180 16 around around RP cord-277909-rn1dow26 180 17 times time NNS cord-277909-rn1dow26 180 18 and and CC cord-277909-rn1dow26 180 19 allows allow VBZ cord-277909-rn1dow26 180 20 high high JJ cord-277909-rn1dow26 180 21 throughput throughput NN cord-277909-rn1dow26 180 22 with with IN cord-277909-rn1dow26 180 23 a a DT cord-277909-rn1dow26 180 24 reduced reduce VBN cord-277909-rn1dow26 180 25 risk risk NN cord-277909-rn1dow26 180 26 of of IN cord-277909-rn1dow26 180 27 user user NN cord-277909-rn1dow26 180 28 error error NN cord-277909-rn1dow26 180 29 . . . cord-277909-rn1dow26 181 1 Many many JJ cord-277909-rn1dow26 181 2 manufacturers manufacturer NNS cord-277909-rn1dow26 181 3 now now RB cord-277909-rn1dow26 181 4 supply supply VBP cord-277909-rn1dow26 181 5 automated automate VBN cord-277909-rn1dow26 181 6 equipment equipment NN cord-277909-rn1dow26 181 7 for for IN cord-277909-rn1dow26 181 8 the the DT cord-277909-rn1dow26 181 9 extraction extraction NN cord-277909-rn1dow26 181 10 of of IN cord-277909-rn1dow26 181 11 nucleic nucleic JJ cord-277909-rn1dow26 181 12 acid acid NN cord-277909-rn1dow26 181 13 from from IN cord-277909-rn1dow26 181 14 diagnostic diagnostic JJ cord-277909-rn1dow26 181 15 samples sample NNS cord-277909-rn1dow26 181 16 ( ( -LRB- cord-277909-rn1dow26 181 17 Table Table NNP cord-277909-rn1dow26 181 18 4 4 CD cord-277909-rn1dow26 181 19 ) ) -RRB- cord-277909-rn1dow26 181 20 . . . cord-277909-rn1dow26 182 1 Some some DT cord-277909-rn1dow26 182 2 manufacturers manufacturer NNS cord-277909-rn1dow26 182 3 provide provide VBP cord-277909-rn1dow26 182 4 open open JJ cord-277909-rn1dow26 182 5 platforms platform NNS cord-277909-rn1dow26 182 6 , , , cord-277909-rn1dow26 182 7 which which WDT cord-277909-rn1dow26 182 8 can can MD cord-277909-rn1dow26 182 9 be be VB cord-277909-rn1dow26 182 10 used use VBN cord-277909-rn1dow26 182 11 with with IN cord-277909-rn1dow26 182 12 other other JJ cord-277909-rn1dow26 182 13 suppliers supplier NNS cord-277909-rn1dow26 182 14 ' ' POS cord-277909-rn1dow26 182 15 kits kit NNS cord-277909-rn1dow26 182 16 and and CC cord-277909-rn1dow26 182 17 reagents reagent NNS cord-277909-rn1dow26 182 18 , , , cord-277909-rn1dow26 182 19 while while IN cord-277909-rn1dow26 182 20 others other NNS cord-277909-rn1dow26 182 21 provide provide VBP cord-277909-rn1dow26 182 22 complete complete JJ cord-277909-rn1dow26 182 23 extraction extraction NN cord-277909-rn1dow26 182 24 solutions solution NNS cord-277909-rn1dow26 182 25 . . . cord-277909-rn1dow26 183 1 Although although IN cord-277909-rn1dow26 183 2 universal universal JJ cord-277909-rn1dow26 183 3 extraction extraction NN cord-277909-rn1dow26 183 4 kits kit NNS cord-277909-rn1dow26 183 5 ( ( -LRB- cord-277909-rn1dow26 183 6 DNA DNA NNP cord-277909-rn1dow26 183 7 and and CC cord-277909-rn1dow26 183 8 RNA RNA NNP cord-277909-rn1dow26 183 9 pathogens pathogen NNS cord-277909-rn1dow26 183 10 and and CC cord-277909-rn1dow26 183 11 most most JJS cord-277909-rn1dow26 183 12 specimen specimen JJ cord-277909-rn1dow26 183 13 types type NNS cord-277909-rn1dow26 183 14 ) ) -RRB- cord-277909-rn1dow26 183 15 are be VBP cord-277909-rn1dow26 183 16 available available JJ cord-277909-rn1dow26 183 17 , , , cord-277909-rn1dow26 183 18 it -PRON- PRP cord-277909-rn1dow26 183 19 should should MD cord-277909-rn1dow26 183 20 also also RB cord-277909-rn1dow26 183 21 be be VB cord-277909-rn1dow26 183 22 noted note VBN cord-277909-rn1dow26 183 23 that that IN cord-277909-rn1dow26 183 24 different different JJ cord-277909-rn1dow26 183 25 kits kit NNS cord-277909-rn1dow26 183 26 can can MD cord-277909-rn1dow26 183 27 be be VB cord-277909-rn1dow26 183 28 used use VBN cord-277909-rn1dow26 183 29 for for IN cord-277909-rn1dow26 183 30 particular particular JJ cord-277909-rn1dow26 183 31 samples sample NNS cord-277909-rn1dow26 183 32 types type NNS cord-277909-rn1dow26 183 33 and and CC cord-277909-rn1dow26 183 34 pathogens pathogen NNS cord-277909-rn1dow26 183 35 ( ( -LRB- cord-277909-rn1dow26 183 36 e.g. e.g. RB cord-277909-rn1dow26 183 37 , , , cord-277909-rn1dow26 183 38 RNA RNA NNP cord-277909-rn1dow26 183 39 or or CC cord-277909-rn1dow26 183 40 DNA DNA NNP cord-277909-rn1dow26 183 41 ) ) -RRB- cord-277909-rn1dow26 183 42 and and CC cord-277909-rn1dow26 183 43 may may MD cord-277909-rn1dow26 183 44 be be VB cord-277909-rn1dow26 183 45 more more RBR cord-277909-rn1dow26 183 46 sensitive sensitive JJ cord-277909-rn1dow26 183 47 for for IN cord-277909-rn1dow26 183 48 a a DT cord-277909-rn1dow26 183 49 particular particular JJ cord-277909-rn1dow26 183 50 application application NN cord-277909-rn1dow26 183 51 . . . cord-277909-rn1dow26 184 1 Although although IN cord-277909-rn1dow26 184 2 automated automated JJ cord-277909-rn1dow26 184 3 extraction extraction NN cord-277909-rn1dow26 184 4 has have VBZ cord-277909-rn1dow26 184 5 many many JJ cord-277909-rn1dow26 184 6 advantages advantage NNS cord-277909-rn1dow26 184 7 , , , cord-277909-rn1dow26 184 8 laboratories laboratory NNS cord-277909-rn1dow26 184 9 should should MD cord-277909-rn1dow26 184 10 also also RB cord-277909-rn1dow26 184 11 consider consider VB cord-277909-rn1dow26 184 12 complementing complement VBG cord-277909-rn1dow26 184 13 this this DT cord-277909-rn1dow26 184 14 service service NN cord-277909-rn1dow26 184 15 with with IN cord-277909-rn1dow26 184 16 a a DT cord-277909-rn1dow26 184 17 manual manual JJ cord-277909-rn1dow26 184 18 extraction extraction NN cord-277909-rn1dow26 184 19 system system NN cord-277909-rn1dow26 184 20 . . . cord-277909-rn1dow26 185 1 This this DT cord-277909-rn1dow26 185 2 can can MD cord-277909-rn1dow26 185 3 be be VB cord-277909-rn1dow26 185 4 used use VBN cord-277909-rn1dow26 185 5 for for IN cord-277909-rn1dow26 185 6 testing test VBG cord-277909-rn1dow26 185 7 emergency emergency NN cord-277909-rn1dow26 185 8 samples sample NNS cord-277909-rn1dow26 185 9 that that WDT cord-277909-rn1dow26 185 10 have have VBP cord-277909-rn1dow26 185 11 arrived arrive VBN cord-277909-rn1dow26 185 12 in in IN cord-277909-rn1dow26 185 13 the the DT cord-277909-rn1dow26 185 14 laboratory laboratory NN cord-277909-rn1dow26 185 15 after after IN cord-277909-rn1dow26 185 16 an an DT cord-277909-rn1dow26 185 17 automated automate VBN cord-277909-rn1dow26 185 18 extraction extraction NN cord-277909-rn1dow26 185 19 has have VBZ cord-277909-rn1dow26 185 20 begun begin VBN cord-277909-rn1dow26 185 21 or or CC cord-277909-rn1dow26 185 22 for for IN cord-277909-rn1dow26 185 23 samples sample NNS cord-277909-rn1dow26 185 24 requiring require VBG cord-277909-rn1dow26 185 25 special special JJ cord-277909-rn1dow26 185 26 processing processing NN cord-277909-rn1dow26 185 27 , , , cord-277909-rn1dow26 185 28 not not RB cord-277909-rn1dow26 185 29 suited suit VBN cord-277909-rn1dow26 185 30 for for IN cord-277909-rn1dow26 185 31 automation automation NN cord-277909-rn1dow26 185 32 , , , cord-277909-rn1dow26 185 33 e.g. e.g. RB cord-277909-rn1dow26 185 34 tissue tissue NN cord-277909-rn1dow26 185 35 . . . cord-277909-rn1dow26 186 1 Many many JJ cord-277909-rn1dow26 186 2 suppliers supplier NNS cord-277909-rn1dow26 186 3 also also RB cord-277909-rn1dow26 186 4 supply supply VBP cord-277909-rn1dow26 186 5 automated automate VBN cord-277909-rn1dow26 186 6 liquid liquid NN cord-277909-rn1dow26 186 7 handling handling NN cord-277909-rn1dow26 186 8 equipment equipment NN cord-277909-rn1dow26 186 9 , , , cord-277909-rn1dow26 186 10 which which WDT cord-277909-rn1dow26 186 11 can can MD cord-277909-rn1dow26 186 12 facilitate facilitate VB cord-277909-rn1dow26 186 13 the the DT cord-277909-rn1dow26 186 14 set set NN cord-277909-rn1dow26 186 15 up up RP cord-277909-rn1dow26 186 16 of of IN cord-277909-rn1dow26 186 17 large large JJ cord-277909-rn1dow26 186 18 numbers number NNS cord-277909-rn1dow26 186 19 of of IN cord-277909-rn1dow26 186 20 PCR PCR NNP cord-277909-rn1dow26 186 21 reactions reaction NNS cord-277909-rn1dow26 186 22 . . . cord-277909-rn1dow26 187 1 Traditionally traditionally RB cord-277909-rn1dow26 187 2 most most RBS cord-277909-rn1dow26 187 3 published publish VBN cord-277909-rn1dow26 187 4 and and CC cord-277909-rn1dow26 187 5 in in IN cord-277909-rn1dow26 187 6 - - HYPH cord-277909-rn1dow26 187 7 house house NN cord-277909-rn1dow26 187 8 developed develop VBD cord-277909-rn1dow26 187 9 real real JJ cord-277909-rn1dow26 187 10 time time NN cord-277909-rn1dow26 187 11 PCR pcr NN cord-277909-rn1dow26 187 12 methods method NNS cord-277909-rn1dow26 187 13 consist consist VBP cord-277909-rn1dow26 187 14 of of IN cord-277909-rn1dow26 187 15 the the DT cord-277909-rn1dow26 187 16 following following JJ cord-277909-rn1dow26 187 17 standard standard JJ cord-277909-rn1dow26 187 18 parame parame NN cord-277909-rn1dow26 187 19 - - HYPH cord-277909-rn1dow26 187 20 ters ter NNS cord-277909-rn1dow26 187 21 : : : cord-277909-rn1dow26 187 22 a a DT cord-277909-rn1dow26 187 23 Taq Taq NNP cord-277909-rn1dow26 187 24 DNA dna NN cord-277909-rn1dow26 187 25 polymerase polymerase NN cord-277909-rn1dow26 187 26 activation activation NN cord-277909-rn1dow26 187 27 step step NN cord-277909-rn1dow26 187 28 ( ( -LRB- cord-277909-rn1dow26 187 29 usually usually RB cord-277909-rn1dow26 187 30 95 95 CD cord-277909-rn1dow26 187 31 • • NN cord-277909-rn1dow26 187 32 C c NN cord-277909-rn1dow26 187 33 for for IN cord-277909-rn1dow26 187 34 2 2 CD cord-277909-rn1dow26 187 35 - - SYM cord-277909-rn1dow26 187 36 15 15 CD cord-277909-rn1dow26 187 37 min min NN cord-277909-rn1dow26 187 38 depending depend VBG cord-277909-rn1dow26 187 39 upon upon IN cord-277909-rn1dow26 187 40 PCR PCR NNP cord-277909-rn1dow26 187 41 kit kit NN cord-277909-rn1dow26 187 42 manufacturer manufacturer NN cord-277909-rn1dow26 187 43 ) ) -RRB- cord-277909-rn1dow26 187 44 followed follow VBN cord-277909-rn1dow26 187 45 by by IN cord-277909-rn1dow26 187 46 40 40 CD cord-277909-rn1dow26 187 47 - - SYM cord-277909-rn1dow26 187 48 50 50 CD cord-277909-rn1dow26 187 49 cycles cycle NNS cord-277909-rn1dow26 187 50 of of IN cord-277909-rn1dow26 187 51 95 95 CD cord-277909-rn1dow26 188 1 • • NNP cord-277909-rn1dow26 189 1 C C NNP cord-277909-rn1dow26 189 2 denaturation denaturation NN cord-277909-rn1dow26 189 3 for for IN cord-277909-rn1dow26 189 4 15 15 CD cord-277909-rn1dow26 189 5 - - SYM cord-277909-rn1dow26 189 6 30 30 CD cord-277909-rn1dow26 189 7 s s NNPS cord-277909-rn1dow26 189 8 and and CC cord-277909-rn1dow26 189 9 an an DT cord-277909-rn1dow26 189 10 annealing anneal VBG cord-277909-rn1dow26 189 11 / / SYM cord-277909-rn1dow26 189 12 extension extension NN cord-277909-rn1dow26 189 13 cycle cycle NN cord-277909-rn1dow26 189 14 of of IN cord-277909-rn1dow26 189 15 60 60 CD cord-277909-rn1dow26 189 16 • • NNS cord-277909-rn1dow26 189 17 C C NNP cord-277909-rn1dow26 189 18 for for IN cord-277909-rn1dow26 189 19 60 60 CD cord-277909-rn1dow26 189 20 s. s. NN cord-277909-rn1dow26 190 1 If if IN cord-277909-rn1dow26 190 2 an an DT cord-277909-rn1dow26 190 3 RNA RNA NNP cord-277909-rn1dow26 190 4 virus virus NN cord-277909-rn1dow26 190 5 is be VBZ cord-277909-rn1dow26 190 6 to to TO cord-277909-rn1dow26 190 7 be be VB cord-277909-rn1dow26 190 8 detected detect VBN cord-277909-rn1dow26 190 9 , , , cord-277909-rn1dow26 190 10 an an DT cord-277909-rn1dow26 190 11 additional additional JJ cord-277909-rn1dow26 190 12 30 30 CD cord-277909-rn1dow26 190 13 min min NN cord-277909-rn1dow26 190 14 reverse reverse NN cord-277909-rn1dow26 190 15 transcription transcription NN cord-277909-rn1dow26 190 16 step step NN cord-277909-rn1dow26 190 17 is be VBZ cord-277909-rn1dow26 190 18 required require VBN cord-277909-rn1dow26 190 19 before before IN cord-277909-rn1dow26 190 20 the the DT cord-277909-rn1dow26 190 21 Taq Taq NNP cord-277909-rn1dow26 190 22 DNA dna NN cord-277909-rn1dow26 190 23 polymerase polymerase NN cord-277909-rn1dow26 190 24 activation activation NN cord-277909-rn1dow26 190 25 . . . cord-277909-rn1dow26 191 1 Overall overall RB cord-277909-rn1dow26 191 2 the the DT cord-277909-rn1dow26 191 3 reaction reaction NN cord-277909-rn1dow26 191 4 run run VBN cord-277909-rn1dow26 191 5 time time NN cord-277909-rn1dow26 191 6 for for IN cord-277909-rn1dow26 191 7 a a DT cord-277909-rn1dow26 191 8 real real JJ cord-277909-rn1dow26 191 9 time time NN cord-277909-rn1dow26 191 10 PCR PCR NNP cord-277909-rn1dow26 191 11 is be VBZ cord-277909-rn1dow26 191 12 between between IN cord-277909-rn1dow26 191 13 80 80 CD cord-277909-rn1dow26 191 14 and and CC cord-277909-rn1dow26 191 15 100 100 CD cord-277909-rn1dow26 191 16 min min NN cord-277909-rn1dow26 191 17 . . . cord-277909-rn1dow26 192 1 We -PRON- PRP cord-277909-rn1dow26 192 2 have have VBP cord-277909-rn1dow26 192 3 repeatedly repeatedly RB cord-277909-rn1dow26 192 4 shown show VBN cord-277909-rn1dow26 192 5 using use VBG cord-277909-rn1dow26 192 6 dilution dilution NN cord-277909-rn1dow26 192 7 series series NN cord-277909-rn1dow26 192 8 of of IN cord-277909-rn1dow26 192 9 a a DT cord-277909-rn1dow26 192 10 number number NN cord-277909-rn1dow26 192 11 of of IN cord-277909-rn1dow26 192 12 DNA DNA NNP cord-277909-rn1dow26 192 13 and and CC cord-277909-rn1dow26 192 14 RNA RNA NNP cord-277909-rn1dow26 192 15 viral viral JJ cord-277909-rn1dow26 192 16 pathogens pathogen NNS cord-277909-rn1dow26 192 17 that that WDT cord-277909-rn1dow26 192 18 reducing reduce VBG cord-277909-rn1dow26 192 19 the the DT cord-277909-rn1dow26 192 20 duration duration NN cord-277909-rn1dow26 192 21 of of IN cord-277909-rn1dow26 192 22 the the DT cord-277909-rn1dow26 192 23 reverse reverse JJ cord-277909-rn1dow26 192 24 transcription transcription NN cord-277909-rn1dow26 192 25 step step NN cord-277909-rn1dow26 192 26 , , , cord-277909-rn1dow26 192 27 the the DT cord-277909-rn1dow26 192 28 denaturing denature VBG cord-277909-rn1dow26 192 29 and and CC cord-277909-rn1dow26 192 30 annealing annealing NN cord-277909-rn1dow26 192 31 / / SYM cord-277909-rn1dow26 192 32 extension extension NN cord-277909-rn1dow26 192 33 step step NN cord-277909-rn1dow26 192 34 by by IN cord-277909-rn1dow26 192 35 50 50 CD cord-277909-rn1dow26 192 36 % % NN cord-277909-rn1dow26 192 37 can can MD cord-277909-rn1dow26 192 38 reduce reduce VB cord-277909-rn1dow26 192 39 the the DT cord-277909-rn1dow26 192 40 reaction reaction NN cord-277909-rn1dow26 192 41 run run VBN cord-277909-rn1dow26 192 42 time time NN cord-277909-rn1dow26 192 43 of of IN cord-277909-rn1dow26 192 44 the the DT cord-277909-rn1dow26 192 45 assay assay NN cord-277909-rn1dow26 192 46 significantly significantly RB cord-277909-rn1dow26 192 47 without without IN cord-277909-rn1dow26 192 48 any any DT cord-277909-rn1dow26 192 49 concurrent concurrent JJ cord-277909-rn1dow26 192 50 loss loss NN cord-277909-rn1dow26 192 51 in in IN cord-277909-rn1dow26 192 52 sensitivity sensitivity NN cord-277909-rn1dow26 192 53 ( ( -LRB- cord-277909-rn1dow26 192 54 Table table NN cord-277909-rn1dow26 192 55 5 5 CD cord-277909-rn1dow26 192 56 ) ) -RRB- cord-277909-rn1dow26 192 57 . . . cord-277909-rn1dow26 193 1 Overall overall JJ cord-277909-rn1dow26 193 2 our -PRON- PRP$ cord-277909-rn1dow26 193 3 reaction reaction NN cord-277909-rn1dow26 193 4 run run NN cord-277909-rn1dow26 193 5 time time NN cord-277909-rn1dow26 193 6 has have VBZ cord-277909-rn1dow26 193 7 reduced reduce VBN cord-277909-rn1dow26 193 8 to to IN cord-277909-rn1dow26 193 9 approximately approximately RB cord-277909-rn1dow26 193 10 60 60 CD cord-277909-rn1dow26 193 11 min min NN cord-277909-rn1dow26 193 12 ( ( -LRB- cord-277909-rn1dow26 193 13 70 70 CD cord-277909-rn1dow26 193 14 min min NN cord-277909-rn1dow26 193 15 for for IN cord-277909-rn1dow26 193 16 RT RT NNP cord-277909-rn1dow26 193 17 - - HYPH cord-277909-rn1dow26 193 18 PCR PCR NNP cord-277909-rn1dow26 193 19 ) ) -RRB- cord-277909-rn1dow26 193 20 , , , cord-277909-rn1dow26 193 21 freeing free VBG cord-277909-rn1dow26 193 22 up up RP cord-277909-rn1dow26 193 23 PCR PCR NNP cord-277909-rn1dow26 193 24 machines machine NNS cord-277909-rn1dow26 193 25 for for IN cord-277909-rn1dow26 193 26 further further JJ cord-277909-rn1dow26 193 27 tests test NNS cord-277909-rn1dow26 193 28 and and CC cord-277909-rn1dow26 193 29 allowing allow VBG cord-277909-rn1dow26 193 30 more more JJR cord-277909-rn1dow26 193 31 testing testing NN cord-277909-rn1dow26 193 32 within within IN cord-277909-rn1dow26 193 33 the the DT cord-277909-rn1dow26 193 34 working work VBG cord-277909-rn1dow26 193 35 day day NN cord-277909-rn1dow26 193 36 . . . cord-277909-rn1dow26 194 1 Most most RBS cord-277909-rn1dow26 194 2 dual dual RB cord-277909-rn1dow26 194 3 labelled label VBN cord-277909-rn1dow26 194 4 probe probe NN cord-277909-rn1dow26 194 5 real real JJ cord-277909-rn1dow26 194 6 time time NN cord-277909-rn1dow26 194 7 PCR PCR NNP cord-277909-rn1dow26 194 8 assays assay NNS cord-277909-rn1dow26 194 9 are be VBP cord-277909-rn1dow26 194 10 designed design VBN cord-277909-rn1dow26 194 11 to to TO cord-277909-rn1dow26 194 12 utilise utilise VB cord-277909-rn1dow26 194 13 the the DT cord-277909-rn1dow26 194 14 same same JJ cord-277909-rn1dow26 194 15 PCR PCR NNP cord-277909-rn1dow26 194 16 parameters parameter NNS cord-277909-rn1dow26 194 17 ( ( -LRB- cord-277909-rn1dow26 194 18 i.e. i.e. FW cord-277909-rn1dow26 194 19 , , , cord-277909-rn1dow26 194 20 denaturation denaturation NN cord-277909-rn1dow26 194 21 step step NN cord-277909-rn1dow26 194 22 of of IN cord-277909-rn1dow26 194 23 95 95 CD cord-277909-rn1dow26 195 1 • • NNP cord-277909-rn1dow26 196 1 C C NNP cord-277909-rn1dow26 196 2 for for IN cord-277909-rn1dow26 196 3 30 30 CD cord-277909-rn1dow26 196 4 s s NNS cord-277909-rn1dow26 196 5 and and CC cord-277909-rn1dow26 196 6 an an DT cord-277909-rn1dow26 196 7 annealing annealing NN cord-277909-rn1dow26 196 8 and and CC cord-277909-rn1dow26 196 9 extention extention NN cord-277909-rn1dow26 196 10 step step NN cord-277909-rn1dow26 196 11 of of IN cord-277909-rn1dow26 196 12 60 60 CD cord-277909-rn1dow26 196 13 • • NNS cord-277909-rn1dow26 196 14 C C NNP cord-277909-rn1dow26 196 15 for for IN cord-277909-rn1dow26 196 16 60 60 CD cord-277909-rn1dow26 196 17 s s NNS cord-277909-rn1dow26 196 18 ) ) -RRB- cord-277909-rn1dow26 196 19 . . . cord-277909-rn1dow26 197 1 Theoretically theoretically RB cord-277909-rn1dow26 197 2 , , , cord-277909-rn1dow26 197 3 multiple multiple JJ cord-277909-rn1dow26 197 4 different different JJ cord-277909-rn1dow26 197 5 real real JJ cord-277909-rn1dow26 197 6 time time NN cord-277909-rn1dow26 197 7 PCR pcr NN cord-277909-rn1dow26 197 8 assays assay NNS cord-277909-rn1dow26 197 9 can can MD cord-277909-rn1dow26 197 10 be be VB cord-277909-rn1dow26 197 11 carried carry VBN cord-277909-rn1dow26 197 12 out out RP cord-277909-rn1dow26 197 13 at at IN cord-277909-rn1dow26 197 14 the the DT cord-277909-rn1dow26 197 15 same same JJ cord-277909-rn1dow26 197 16 time time NN cord-277909-rn1dow26 197 17 on on IN cord-277909-rn1dow26 197 18 the the DT cord-277909-rn1dow26 197 19 sample sample NN cord-277909-rn1dow26 197 20 plate plate NN cord-277909-rn1dow26 197 21 . . . cord-277909-rn1dow26 198 1 We -PRON- PRP cord-277909-rn1dow26 198 2 have have VBP cord-277909-rn1dow26 198 3 also also RB cord-277909-rn1dow26 198 4 shown show VBN cord-277909-rn1dow26 198 5 that that IN cord-277909-rn1dow26 198 6 , , , cord-277909-rn1dow26 198 7 where where WRB cord-277909-rn1dow26 198 8 DNA DNA NNP cord-277909-rn1dow26 198 9 and and CC cord-277909-rn1dow26 198 10 RNA RNA NNP cord-277909-rn1dow26 198 11 reagents reagent NNS cord-277909-rn1dow26 198 12 are be VBP cord-277909-rn1dow26 198 13 purchased purchase VBN cord-277909-rn1dow26 198 14 from from IN cord-277909-rn1dow26 198 15 the the DT cord-277909-rn1dow26 198 16 same same JJ cord-277909-rn1dow26 198 17 supplier supplier NN cord-277909-rn1dow26 198 18 , , , cord-277909-rn1dow26 198 19 and and CC cord-277909-rn1dow26 198 20 therefore therefore RB cord-277909-rn1dow26 198 21 have have VBP cord-277909-rn1dow26 198 22 identical identical JJ cord-277909-rn1dow26 198 23 Taq Taq NNP cord-277909-rn1dow26 198 24 activation activation NN cord-277909-rn1dow26 198 25 requirements requirement NNS cord-277909-rn1dow26 198 26 , , , cord-277909-rn1dow26 198 27 DNA dna NN cord-277909-rn1dow26 198 28 assays assay NNS cord-277909-rn1dow26 198 29 do do VBP cord-277909-rn1dow26 198 30 not not RB cord-277909-rn1dow26 198 31 suffer suffer VB cord-277909-rn1dow26 198 32 any any DT cord-277909-rn1dow26 198 33 loss loss NN cord-277909-rn1dow26 198 34 in in IN cord-277909-rn1dow26 198 35 performance performance NN cord-277909-rn1dow26 198 36 when when WRB cord-277909-rn1dow26 198 37 run run VBN cord-277909-rn1dow26 198 38 through through IN cord-277909-rn1dow26 198 39 RT RT NNP cord-277909-rn1dow26 198 40 - - HYPH cord-277909-rn1dow26 198 41 PCR PCR NNP cord-277909-rn1dow26 198 42 cycling cycling NN cord-277909-rn1dow26 198 43 conditions condition NNS cord-277909-rn1dow26 198 44 . . . cord-277909-rn1dow26 199 1 This this DT cord-277909-rn1dow26 199 2 will will MD cord-277909-rn1dow26 199 3 allow allow VB cord-277909-rn1dow26 199 4 laboratories laboratory NNS cord-277909-rn1dow26 199 5 greater great JJR cord-277909-rn1dow26 199 6 flexibility flexibility NN cord-277909-rn1dow26 199 7 and and CC cord-277909-rn1dow26 199 8 provide provide VB cord-277909-rn1dow26 199 9 a a DT cord-277909-rn1dow26 199 10 rapid rapid JJ cord-277909-rn1dow26 199 11 service service NN cord-277909-rn1dow26 199 12 . . . cord-277909-rn1dow26 200 1 Pre pre JJ cord-277909-rn1dow26 200 2 - - JJ cord-277909-rn1dow26 200 3 prepared prepared JJ cord-277909-rn1dow26 200 4 , , , cord-277909-rn1dow26 200 5 frozen frozen JJ cord-277909-rn1dow26 200 6 real real JJ cord-277909-rn1dow26 200 7 time time NN cord-277909-rn1dow26 200 8 PCR pcr NN cord-277909-rn1dow26 200 9 reagents reagent NNS cord-277909-rn1dow26 200 10 are be VBP cord-277909-rn1dow26 200 11 user user NN cord-277909-rn1dow26 200 12 friendly friendly JJ cord-277909-rn1dow26 200 13 and and CC cord-277909-rn1dow26 200 14 lead lead VB cord-277909-rn1dow26 200 15 to to IN cord-277909-rn1dow26 200 16 reduced reduce VBN cord-277909-rn1dow26 200 17 TRT TRT NNP cord-277909-rn1dow26 200 18 and and CC cord-277909-rn1dow26 200 19 improved improve VBN cord-277909-rn1dow26 200 20 quality quality NN cord-277909-rn1dow26 200 21 control control NN cord-277909-rn1dow26 200 22 ( ( -LRB- cord-277909-rn1dow26 200 23 QC QC NNP cord-277909-rn1dow26 200 24 ) ) -RRB- cord-277909-rn1dow26 200 25 when when WRB cord-277909-rn1dow26 200 26 compared compare VBN cord-277909-rn1dow26 200 27 to to IN cord-277909-rn1dow26 200 28 the the DT cord-277909-rn1dow26 200 29 preparation preparation NN cord-277909-rn1dow26 200 30 of of IN cord-277909-rn1dow26 200 31 PCR PCR NNP cord-277909-rn1dow26 200 32 mixes mix NNS cord-277909-rn1dow26 200 33 from from IN cord-277909-rn1dow26 200 34 separate separate JJ cord-277909-rn1dow26 200 35 reagents reagent NNS cord-277909-rn1dow26 200 36 . . . cord-277909-rn1dow26 201 1 We -PRON- PRP cord-277909-rn1dow26 201 2 have have VBP cord-277909-rn1dow26 201 3 assessed assess VBN cord-277909-rn1dow26 201 4 two two CD cord-277909-rn1dow26 201 5 different different JJ cord-277909-rn1dow26 201 6 methods method NNS cord-277909-rn1dow26 201 7 of of IN cord-277909-rn1dow26 201 8 pre pre JJ cord-277909-rn1dow26 201 9 - - JJ cord-277909-rn1dow26 201 10 prepared prepared JJ cord-277909-rn1dow26 201 11 real real JJ cord-277909-rn1dow26 201 12 time time NN cord-277909-rn1dow26 201 13 PCR PCR NNP cord-277909-rn1dow26 201 14 reagents reagent NNS cord-277909-rn1dow26 201 15 : : : cord-277909-rn1dow26 201 16 frozen frozen JJ cord-277909-rn1dow26 201 17 aliquots aliquot NNS cord-277909-rn1dow26 201 18 of of IN cord-277909-rn1dow26 201 19 pooled pool VBN cord-277909-rn1dow26 201 20 primers primer NNS cord-277909-rn1dow26 201 21 and and CC cord-277909-rn1dow26 201 22 probes probe NNS cord-277909-rn1dow26 201 23 , , , cord-277909-rn1dow26 201 24 and and CC cord-277909-rn1dow26 201 25 frozen frozen JJ cord-277909-rn1dow26 201 26 aliquots aliquot NNS cord-277909-rn1dow26 201 27 containing contain VBG cord-277909-rn1dow26 201 28 all all DT cord-277909-rn1dow26 201 29 real real JJ cord-277909-rn1dow26 201 30 time time NN cord-277909-rn1dow26 201 31 PCR pcr NN cord-277909-rn1dow26 201 32 reagents reagent NNS cord-277909-rn1dow26 201 33 . . . cord-277909-rn1dow26 202 1 Both both DT cord-277909-rn1dow26 202 2 systems system NNS cord-277909-rn1dow26 202 3 have have VBP cord-277909-rn1dow26 202 4 been be VBN cord-277909-rn1dow26 202 5 assessed assess VBN cord-277909-rn1dow26 202 6 over over IN cord-277909-rn1dow26 202 7 relatively relatively RB cord-277909-rn1dow26 202 8 short short JJ cord-277909-rn1dow26 202 9 time time NN cord-277909-rn1dow26 202 10 period period NN cord-277909-rn1dow26 202 11 ( ( -LRB- cord-277909-rn1dow26 202 12 up up IN cord-277909-rn1dow26 202 13 to to IN cord-277909-rn1dow26 202 14 a a DT cord-277909-rn1dow26 202 15 maximum maximum NN cord-277909-rn1dow26 202 16 of of IN cord-277909-rn1dow26 202 17 10 10 CD cord-277909-rn1dow26 202 18 weeks week NNS cord-277909-rn1dow26 202 19 , , , cord-277909-rn1dow26 202 20 which which WDT cord-277909-rn1dow26 202 21 corresponds correspond VBZ cord-277909-rn1dow26 202 22 to to IN cord-277909-rn1dow26 202 23 the the DT cord-277909-rn1dow26 202 24 maximum maximum JJ cord-277909-rn1dow26 202 25 period period NN cord-277909-rn1dow26 202 26 of of IN cord-277909-rn1dow26 202 27 time time NN cord-277909-rn1dow26 202 28 a a DT cord-277909-rn1dow26 202 29 pool pool NN cord-277909-rn1dow26 202 30 would would MD cord-277909-rn1dow26 202 31 last last VB cord-277909-rn1dow26 202 32 before before IN cord-277909-rn1dow26 202 33 running run VBG cord-277909-rn1dow26 202 34 out out RB cord-277909-rn1dow26 202 35 ) ) -RRB- cord-277909-rn1dow26 202 36 . . . cord-277909-rn1dow26 203 1 Ideally ideally RB cord-277909-rn1dow26 203 2 these these DT cord-277909-rn1dow26 203 3 would would MD cord-277909-rn1dow26 203 4 have have VB cord-277909-rn1dow26 203 5 been be VBN cord-277909-rn1dow26 203 6 assessed assess VBN cord-277909-rn1dow26 203 7 over over IN cord-277909-rn1dow26 203 8 a a DT cord-277909-rn1dow26 203 9 longer long JJR cord-277909-rn1dow26 203 10 period period NN cord-277909-rn1dow26 203 11 . . . cord-277909-rn1dow26 204 1 We -PRON- PRP cord-277909-rn1dow26 204 2 find find VBP cord-277909-rn1dow26 204 3 that that IN cord-277909-rn1dow26 204 4 the the DT cord-277909-rn1dow26 204 5 pooled pool VBN cord-277909-rn1dow26 204 6 primer primer NN cord-277909-rn1dow26 204 7 and and CC cord-277909-rn1dow26 204 8 probe probe NN cord-277909-rn1dow26 204 9 approach approach NN cord-277909-rn1dow26 204 10 best good JJS cord-277909-rn1dow26 204 11 suits suit NNS cord-277909-rn1dow26 204 12 seasonal seasonal JJ cord-277909-rn1dow26 204 13 assays assay NNS cord-277909-rn1dow26 204 14 such such JJ cord-277909-rn1dow26 204 15 as as IN cord-277909-rn1dow26 204 16 those those DT cord-277909-rn1dow26 204 17 for for IN cord-277909-rn1dow26 204 18 respiratory respiratory JJ cord-277909-rn1dow26 204 19 pathogens pathogen NNS cord-277909-rn1dow26 204 20 , , , cord-277909-rn1dow26 204 21 whereas whereas IN cord-277909-rn1dow26 204 22 the the DT cord-277909-rn1dow26 204 23 latter latter JJ cord-277909-rn1dow26 204 24 approach approach NN cord-277909-rn1dow26 204 25 is be VBZ cord-277909-rn1dow26 204 26 more more RBR cord-277909-rn1dow26 204 27 suited suited JJ cord-277909-rn1dow26 204 28 to to IN cord-277909-rn1dow26 204 29 assays assay NNS cord-277909-rn1dow26 204 30 which which WDT cord-277909-rn1dow26 204 31 are be VBP cord-277909-rn1dow26 204 32 performed perform VBN cord-277909-rn1dow26 204 33 regularly regularly RB cord-277909-rn1dow26 204 34 throughout throughout IN cord-277909-rn1dow26 204 35 the the DT cord-277909-rn1dow26 204 36 year year NN cord-277909-rn1dow26 204 37 on on IN cord-277909-rn1dow26 204 38 a a DT cord-277909-rn1dow26 204 39 standard standard JJ cord-277909-rn1dow26 204 40 number number NN cord-277909-rn1dow26 204 41 of of IN cord-277909-rn1dow26 204 42 samples sample NNS cord-277909-rn1dow26 204 43 . . . cord-277909-rn1dow26 205 1 The the DT cord-277909-rn1dow26 205 2 advantages advantage NNS cord-277909-rn1dow26 205 3 and and CC cord-277909-rn1dow26 205 4 disadvantages disadvantage NNS cord-277909-rn1dow26 205 5 are be VBP cord-277909-rn1dow26 205 6 listed list VBN cord-277909-rn1dow26 205 7 in in IN cord-277909-rn1dow26 205 8 Table Table NNP cord-277909-rn1dow26 205 9 6 6 CD cord-277909-rn1dow26 205 10 . . . cord-277909-rn1dow26 206 1 We -PRON- PRP cord-277909-rn1dow26 206 2 have have VBP cord-277909-rn1dow26 206 3 introduced introduce VBN cord-277909-rn1dow26 206 4 pooled pool VBN cord-277909-rn1dow26 206 5 primer primer NN cord-277909-rn1dow26 206 6 and and CC cord-277909-rn1dow26 206 7 probes probe NNS cord-277909-rn1dow26 206 8 for for IN cord-277909-rn1dow26 206 9 the the DT cord-277909-rn1dow26 206 10 majority majority NN cord-277909-rn1dow26 206 11 of of IN cord-277909-rn1dow26 206 12 our -PRON- PRP$ cord-277909-rn1dow26 206 13 routine routine JJ cord-277909-rn1dow26 206 14 DNA dna NN cord-277909-rn1dow26 206 15 and and CC cord-277909-rn1dow26 206 16 RNA RNA NNP cord-277909-rn1dow26 206 17 tests test NNS cord-277909-rn1dow26 206 18 . . . cord-277909-rn1dow26 207 1 This this DT cord-277909-rn1dow26 207 2 has have VBZ cord-277909-rn1dow26 207 3 proved prove VBN cord-277909-rn1dow26 207 4 especially especially RB cord-277909-rn1dow26 207 5 useful useful JJ cord-277909-rn1dow26 207 6 for for IN cord-277909-rn1dow26 207 7 our -PRON- PRP$ cord-277909-rn1dow26 207 8 high high JJ cord-277909-rn1dow26 207 9 throughput throughput NN cord-277909-rn1dow26 207 10 assays assay NNS cord-277909-rn1dow26 207 11 such such JJ cord-277909-rn1dow26 207 12 as as IN cord-277909-rn1dow26 207 13 the the DT cord-277909-rn1dow26 207 14 ' ' `` cord-277909-rn1dow26 207 15 Respiratory Respiratory NNP cord-277909-rn1dow26 207 16 Screen Screen NNP cord-277909-rn1dow26 207 17 ' ' '' cord-277909-rn1dow26 207 18 , , , cord-277909-rn1dow26 207 19 which which WDT cord-277909-rn1dow26 207 20 consists consist VBZ cord-277909-rn1dow26 207 21 of of IN cord-277909-rn1dow26 207 22 five five CD cord-277909-rn1dow26 207 23 triplex triplex JJ cord-277909-rn1dow26 207 24 real real JJ cord-277909-rn1dow26 207 25 time time NN cord-277909-rn1dow26 207 26 RT RT NNP cord-277909-rn1dow26 207 27 - - HYPH cord-277909-rn1dow26 207 28 PCR PCR NNP cord-277909-rn1dow26 207 29 assays assay NNS cord-277909-rn1dow26 207 30 . . . cord-277909-rn1dow26 208 1 For for IN cord-277909-rn1dow26 208 2 each each DT cord-277909-rn1dow26 208 3 multiplex multiplex JJ cord-277909-rn1dow26 208 4 assay assay NN cord-277909-rn1dow26 208 5 , , , cord-277909-rn1dow26 208 6 the the DT cord-277909-rn1dow26 208 7 operator operator NN cord-277909-rn1dow26 208 8 needs need VBZ cord-277909-rn1dow26 208 9 only only RB cord-277909-rn1dow26 208 10 to to TO cord-277909-rn1dow26 208 11 mix mix VB cord-277909-rn1dow26 208 12 three three CD cord-277909-rn1dow26 208 13 tubes tube NNS cord-277909-rn1dow26 208 14 containing contain VBG cord-277909-rn1dow26 208 15 pre pre JJ cord-277909-rn1dow26 208 16 - - JJ cord-277909-rn1dow26 208 17 aliquotted aliquotte VBN cord-277909-rn1dow26 208 18 reagents reagent NNS cord-277909-rn1dow26 208 19 : : : cord-277909-rn1dow26 208 20 an an DT cord-277909-rn1dow26 208 21 aliquot aliquot NN cord-277909-rn1dow26 208 22 of of IN cord-277909-rn1dow26 208 23 mastermix mastermix NNP cord-277909-rn1dow26 208 24 containing contain VBG cord-277909-rn1dow26 208 25 ROX ROX NNP cord-277909-rn1dow26 208 26 reference reference NN cord-277909-rn1dow26 208 27 dye dye NN cord-277909-rn1dow26 208 28 , , , cord-277909-rn1dow26 208 29 one one CD cord-277909-rn1dow26 208 30 containing contain VBG cord-277909-rn1dow26 208 31 enzyme enzyme NN cord-277909-rn1dow26 208 32 mix mix NN cord-277909-rn1dow26 208 33 ( ( -LRB- cord-277909-rn1dow26 208 34 RT rt NN cord-277909-rn1dow26 208 35 + + CC cord-277909-rn1dow26 208 36 Taq Taq NNP cord-277909-rn1dow26 208 37 ) ) -RRB- cord-277909-rn1dow26 208 38 , , , cord-277909-rn1dow26 208 39 and and CC cord-277909-rn1dow26 208 40 an an DT cord-277909-rn1dow26 208 41 aliquot aliquot NN cord-277909-rn1dow26 208 42 of of IN cord-277909-rn1dow26 208 43 primer primer NN cord-277909-rn1dow26 208 44 probe probe NN cord-277909-rn1dow26 208 45 pool pool NN cord-277909-rn1dow26 208 46 ( ( -LRB- cord-277909-rn1dow26 208 47 containing contain VBG cord-277909-rn1dow26 208 48 three three CD cord-277909-rn1dow26 208 49 sets set NNS cord-277909-rn1dow26 208 50 of of IN cord-277909-rn1dow26 208 51 primers primer NNS cord-277909-rn1dow26 208 52 and and CC cord-277909-rn1dow26 208 53 probes probe NNS cord-277909-rn1dow26 208 54 , , , cord-277909-rn1dow26 208 55 and and CC cord-277909-rn1dow26 208 56 sufficient sufficient JJ cord-277909-rn1dow26 208 57 water water NN cord-277909-rn1dow26 208 58 ) ) -RRB- cord-277909-rn1dow26 208 59 . . . cord-277909-rn1dow26 209 1 In in IN cord-277909-rn1dow26 209 2 this this DT cord-277909-rn1dow26 209 3 way way NN cord-277909-rn1dow26 209 4 , , , cord-277909-rn1dow26 209 5 mastermix mastermix NNP cord-277909-rn1dow26 209 6 can can MD cord-277909-rn1dow26 209 7 be be VB cord-277909-rn1dow26 209 8 prepared prepare VBN cord-277909-rn1dow26 209 9 rapidly rapidly RB cord-277909-rn1dow26 209 10 . . . cord-277909-rn1dow26 210 1 The the DT cord-277909-rn1dow26 210 2 reagents reagent NNS cord-277909-rn1dow26 210 3 have have VBP cord-277909-rn1dow26 210 4 been be VBN cord-277909-rn1dow26 210 5 carefully carefully RB cord-277909-rn1dow26 210 6 quality quality NN cord-277909-rn1dow26 210 7 controlled control VBN cord-277909-rn1dow26 210 8 and and CC cord-277909-rn1dow26 210 9 the the DT cord-277909-rn1dow26 210 10 possibility possibility NN cord-277909-rn1dow26 210 11 of of IN cord-277909-rn1dow26 210 12 pipetting pipetting NN cord-277909-rn1dow26 210 13 or or CC cord-277909-rn1dow26 210 14 calculation calculation NN cord-277909-rn1dow26 210 15 errors error NNS cord-277909-rn1dow26 210 16 at at IN cord-277909-rn1dow26 210 17 the the DT cord-277909-rn1dow26 210 18 time time NN cord-277909-rn1dow26 210 19 of of IN cord-277909-rn1dow26 210 20 preparation preparation NN cord-277909-rn1dow26 210 21 is be VBZ cord-277909-rn1dow26 210 22 reduced reduce VBN cord-277909-rn1dow26 210 23 . . . cord-277909-rn1dow26 211 1 The the DT cord-277909-rn1dow26 211 2 production production NN cord-277909-rn1dow26 211 3 of of IN cord-277909-rn1dow26 211 4 a a DT cord-277909-rn1dow26 211 5 large large JJ cord-277909-rn1dow26 211 6 number number NN cord-277909-rn1dow26 211 7 of of IN cord-277909-rn1dow26 211 8 aliquots aliquot NNS cord-277909-rn1dow26 211 9 at at IN cord-277909-rn1dow26 211 10 the the DT cord-277909-rn1dow26 211 11 same same JJ cord-277909-rn1dow26 211 12 time time NN cord-277909-rn1dow26 211 13 ( ( -LRB- cord-277909-rn1dow26 211 14 sufficient sufficient JJ cord-277909-rn1dow26 211 15 for for IN cord-277909-rn1dow26 211 16 approximately approximately RB cord-277909-rn1dow26 211 17 3000 3000 CD cord-277909-rn1dow26 211 18 tests test NNS cord-277909-rn1dow26 211 19 ) ) -RRB- cord-277909-rn1dow26 211 20 also also RB cord-277909-rn1dow26 211 21 facilitates facilitate VBZ cord-277909-rn1dow26 211 22 inter inter JJ cord-277909-rn1dow26 211 23 - - JJ cord-277909-rn1dow26 211 24 run run JJ cord-277909-rn1dow26 211 25 reproducibility reproducibility NN cord-277909-rn1dow26 211 26 and and CC cord-277909-rn1dow26 211 27 assists assist VBZ cord-277909-rn1dow26 211 28 in in IN cord-277909-rn1dow26 211 29 maintaining maintain VBG cord-277909-rn1dow26 211 30 the the DT cord-277909-rn1dow26 211 31 quality quality NN cord-277909-rn1dow26 211 32 of of IN cord-277909-rn1dow26 211 33 the the DT cord-277909-rn1dow26 211 34 results result NNS cord-277909-rn1dow26 211 35 . . . cord-277909-rn1dow26 212 1 While while IN cord-277909-rn1dow26 212 2 some some DT cord-277909-rn1dow26 212 3 mix mix NN cord-277909-rn1dow26 212 4 is be VBZ cord-277909-rn1dow26 212 5 unavoidably unavoidably RB cord-277909-rn1dow26 212 6 wasted waste VBN cord-277909-rn1dow26 212 7 , , , cord-277909-rn1dow26 212 8 the the DT cord-277909-rn1dow26 212 9 time time NN cord-277909-rn1dow26 212 10 saved save VBD cord-277909-rn1dow26 212 11 and and CC cord-277909-rn1dow26 212 12 the the DT cord-277909-rn1dow26 212 13 reduced reduced JJ cord-277909-rn1dow26 212 14 number number NN cord-277909-rn1dow26 212 15 of of IN cord-277909-rn1dow26 212 16 failed fail VBN cord-277909-rn1dow26 212 17 runs run NNS cord-277909-rn1dow26 212 18 compensates compensate VBZ cord-277909-rn1dow26 212 19 for for IN cord-277909-rn1dow26 212 20 this this DT cord-277909-rn1dow26 212 21 cost cost NN cord-277909-rn1dow26 212 22 , , , cord-277909-rn1dow26 212 23 and and CC cord-277909-rn1dow26 212 24 during during IN cord-277909-rn1dow26 212 25 the the DT cord-277909-rn1dow26 212 26 summer summer NN cord-277909-rn1dow26 212 27 months month NNS cord-277909-rn1dow26 212 28 when when WRB cord-277909-rn1dow26 212 29 sample sample NN cord-277909-rn1dow26 212 30 numbers number NNS cord-277909-rn1dow26 212 31 are be VBP cord-277909-rn1dow26 212 32 much much RB cord-277909-rn1dow26 212 33 reduced reduce VBN cord-277909-rn1dow26 212 34 , , , cord-277909-rn1dow26 212 35 smaller small JJR cord-277909-rn1dow26 212 36 aliquots aliquot NNS cord-277909-rn1dow26 212 37 can can MD cord-277909-rn1dow26 212 38 be be VB cord-277909-rn1dow26 212 39 prepared prepare VBN cord-277909-rn1dow26 212 40 . . . cord-277909-rn1dow26 213 1 Table table NN cord-277909-rn1dow26 213 2 7 7 CD cord-277909-rn1dow26 213 3 shows show VBZ cord-277909-rn1dow26 213 4 the the DT cord-277909-rn1dow26 213 5 CT CT NNP cord-277909-rn1dow26 213 6 values value NNS cord-277909-rn1dow26 213 7 obtained obtain VBN cord-277909-rn1dow26 213 8 from from IN cord-277909-rn1dow26 213 9 the the DT cord-277909-rn1dow26 213 10 coronavirus coronavirus NN cord-277909-rn1dow26 213 11 triplex triplex NN cord-277909-rn1dow26 213 12 assay assay NN cord-277909-rn1dow26 213 13 using use VBG cord-277909-rn1dow26 213 14 pooled pool VBN cord-277909-rn1dow26 213 15 primers primer NNS cord-277909-rn1dow26 213 16 and and CC cord-277909-rn1dow26 213 17 probed probe VBN cord-277909-rn1dow26 213 18 stored store VBN cord-277909-rn1dow26 213 19 for for IN cord-277909-rn1dow26 213 20 up up IN cord-277909-rn1dow26 213 21 to to TO cord-277909-rn1dow26 213 22 6 6 CD cord-277909-rn1dow26 213 23 weeks week NNS cord-277909-rn1dow26 213 24 , , , cord-277909-rn1dow26 213 25 demonstrating demonstrate VBG cord-277909-rn1dow26 213 26 the the DT cord-277909-rn1dow26 213 27 stability stability NN cord-277909-rn1dow26 213 28 of of IN cord-277909-rn1dow26 213 29 the the DT cord-277909-rn1dow26 213 30 reagents reagent NNS cord-277909-rn1dow26 213 31 when when WRB cord-277909-rn1dow26 213 32 stored store VBN cord-277909-rn1dow26 213 33 at at IN cord-277909-rn1dow26 213 34 −20 −20 NNP cord-277909-rn1dow26 213 35 • • NNP cord-277909-rn1dow26 213 36 C. C. NNP cord-277909-rn1dow26 214 1 We -PRON- PRP cord-277909-rn1dow26 214 2 have have VBP cord-277909-rn1dow26 214 3 now now RB cord-277909-rn1dow26 214 4 been be VBN cord-277909-rn1dow26 214 5 using use VBG cord-277909-rn1dow26 214 6 the the DT cord-277909-rn1dow26 214 7 same same JJ cord-277909-rn1dow26 214 8 lot lot NN cord-277909-rn1dow26 214 9 number number NN cord-277909-rn1dow26 214 10 of of IN cord-277909-rn1dow26 214 11 pooled pool VBN cord-277909-rn1dow26 214 12 primer primer NN cord-277909-rn1dow26 214 13 - - HYPH cord-277909-rn1dow26 214 14 probe probe NN cord-277909-rn1dow26 214 15 for for IN cord-277909-rn1dow26 214 16 the the DT cord-277909-rn1dow26 214 17 coronavirus coronavirus NN cord-277909-rn1dow26 214 18 assay assay NN cord-277909-rn1dow26 214 19 for for IN cord-277909-rn1dow26 214 20 in in IN cord-277909-rn1dow26 214 21 excess excess NN cord-277909-rn1dow26 214 22 of of IN cord-277909-rn1dow26 214 23 10 10 CD cord-277909-rn1dow26 214 24 weeks week NNS cord-277909-rn1dow26 214 25 without without IN cord-277909-rn1dow26 214 26 loss loss NN cord-277909-rn1dow26 214 27 of of IN cord-277909-rn1dow26 214 28 performance performance NN cord-277909-rn1dow26 214 29 . . . cord-277909-rn1dow26 215 1 With with IN cord-277909-rn1dow26 215 2 this this DT cord-277909-rn1dow26 215 3 system system NN cord-277909-rn1dow26 215 4 and and CC cord-277909-rn1dow26 215 5 pooled pool VBN cord-277909-rn1dow26 215 6 controls control NNS cord-277909-rn1dow26 215 7 ( ( -LRB- cord-277909-rn1dow26 215 8 see see VB cord-277909-rn1dow26 215 9 below below RB cord-277909-rn1dow26 215 10 ) ) -RRB- cord-277909-rn1dow26 215 11 in in IN cord-277909-rn1dow26 215 12 use use NN cord-277909-rn1dow26 215 13 , , , cord-277909-rn1dow26 215 14 we -PRON- PRP cord-277909-rn1dow26 215 15 are be VBP cord-277909-rn1dow26 215 16 now now RB cord-277909-rn1dow26 215 17 able able JJ cord-277909-rn1dow26 215 18 to to TO cord-277909-rn1dow26 215 19 provide provide VB cord-277909-rn1dow26 215 20 an an DT cord-277909-rn1dow26 215 21 efficient efficient JJ cord-277909-rn1dow26 215 22 and and CC cord-277909-rn1dow26 215 23 reliable reliable JJ cord-277909-rn1dow26 215 24 . . . cord-277909-rn1dow26 216 1 3.6.2 3.6.2 CD cord-277909-rn1dow26 216 2 . . . cord-277909-rn1dow26 217 1 Frozen frozen JJ cord-277909-rn1dow26 217 2 pools pool NNS cord-277909-rn1dow26 217 3 of of IN cord-277909-rn1dow26 217 4 primers primer NNS cord-277909-rn1dow26 217 5 , , , cord-277909-rn1dow26 217 6 probes probe NNS cord-277909-rn1dow26 217 7 , , , cord-277909-rn1dow26 217 8 mastermix mastermix NNP cord-277909-rn1dow26 217 9 and and CC cord-277909-rn1dow26 217 10 enzyme enzyme NNP cord-277909-rn1dow26 218 1 The the DT cord-277909-rn1dow26 218 2 use use NN cord-277909-rn1dow26 218 3 of of IN cord-277909-rn1dow26 218 4 aliquots aliquot NNS cord-277909-rn1dow26 218 5 of of IN cord-277909-rn1dow26 218 6 frozen frozen JJ cord-277909-rn1dow26 218 7 mastermix mastermix NN cord-277909-rn1dow26 218 8 ( ( -LRB- cord-277909-rn1dow26 218 9 containing contain VBG cord-277909-rn1dow26 218 10 all all DT cord-277909-rn1dow26 218 11 PCR PCR NNP cord-277909-rn1dow26 218 12 reagents reagent NNS cord-277909-rn1dow26 218 13 except except IN cord-277909-rn1dow26 218 14 template template NN cord-277909-rn1dow26 218 15 ) ) -RRB- cord-277909-rn1dow26 218 16 is be VBZ cord-277909-rn1dow26 218 17 an an DT cord-277909-rn1dow26 218 18 alternative alternative NN cord-277909-rn1dow26 218 19 to to IN cord-277909-rn1dow26 218 20 frozen frozen JJ cord-277909-rn1dow26 218 21 primer primer NN cord-277909-rn1dow26 218 22 and and CC cord-277909-rn1dow26 218 23 probe probe NN cord-277909-rn1dow26 218 24 aliquots aliquot NNS cord-277909-rn1dow26 218 25 described describe VBN cord-277909-rn1dow26 218 26 above above RB cord-277909-rn1dow26 218 27 . . . cord-277909-rn1dow26 219 1 The the DT cord-277909-rn1dow26 219 2 laboratory laboratory NN cord-277909-rn1dow26 219 3 user user NN cord-277909-rn1dow26 219 4 need nee MD cord-277909-rn1dow26 219 5 only only RB cord-277909-rn1dow26 219 6 remove remove VB cord-277909-rn1dow26 219 7 the the DT cord-277909-rn1dow26 219 8 desired desire VBN cord-277909-rn1dow26 219 9 number number NN cord-277909-rn1dow26 219 10 of of IN cord-277909-rn1dow26 219 11 aliquots aliquot NNS cord-277909-rn1dow26 219 12 ( ( -LRB- cord-277909-rn1dow26 219 13 or or CC cord-277909-rn1dow26 219 14 plates plate NNS cord-277909-rn1dow26 219 15 if if IN cord-277909-rn1dow26 219 16 frozen freeze VBN cord-277909-rn1dow26 219 17 in in IN cord-277909-rn1dow26 219 18 this this DT cord-277909-rn1dow26 219 19 format format NN cord-277909-rn1dow26 219 20 ) ) -RRB- cord-277909-rn1dow26 219 21 , , , cord-277909-rn1dow26 219 22 defrost defrost VB cord-277909-rn1dow26 219 23 and and CC cord-277909-rn1dow26 219 24 then then RB cord-277909-rn1dow26 219 25 add add VB cord-277909-rn1dow26 219 26 the the DT cord-277909-rn1dow26 219 27 template template NN cord-277909-rn1dow26 219 28 to to TO cord-277909-rn1dow26 219 29 be be VB cord-277909-rn1dow26 219 30 tested test VBN cord-277909-rn1dow26 219 31 . . . cord-277909-rn1dow26 220 1 Frozen frozen JJ cord-277909-rn1dow26 220 2 aliquots aliquot NNS cord-277909-rn1dow26 220 3 are be VBP cord-277909-rn1dow26 220 4 easier easy JJR cord-277909-rn1dow26 220 5 to to TO cord-277909-rn1dow26 220 6 use use VB cord-277909-rn1dow26 220 7 than than IN cord-277909-rn1dow26 220 8 the the DT cord-277909-rn1dow26 220 9 pooled pool VBN cord-277909-rn1dow26 220 10 primer primer NN cord-277909-rn1dow26 220 11 and and CC cord-277909-rn1dow26 220 12 probe probe NN cord-277909-rn1dow26 220 13 method method NN cord-277909-rn1dow26 220 14 , , , cord-277909-rn1dow26 220 15 facilitate facilitate VBP cord-277909-rn1dow26 220 16 rigorous rigorous JJ cord-277909-rn1dow26 220 17 quality quality NN cord-277909-rn1dow26 220 18 control control NN cord-277909-rn1dow26 220 19 and and CC cord-277909-rn1dow26 220 20 reduce reduce VB cord-277909-rn1dow26 220 21 the the DT cord-277909-rn1dow26 220 22 overall overall JJ cord-277909-rn1dow26 220 23 turn turn NN cord-277909-rn1dow26 220 24 around around IN cord-277909-rn1dow26 220 25 times time NNS cord-277909-rn1dow26 220 26 . . . cord-277909-rn1dow26 221 1 However however RB cord-277909-rn1dow26 221 2 , , , cord-277909-rn1dow26 221 3 they -PRON- PRP cord-277909-rn1dow26 221 4 are be VBP cord-277909-rn1dow26 221 5 less less RBR cord-277909-rn1dow26 221 6 flexible flexible JJ cord-277909-rn1dow26 221 7 than than IN cord-277909-rn1dow26 221 8 the the DT cord-277909-rn1dow26 221 9 primer primer NN cord-277909-rn1dow26 221 10 probe probe NN cord-277909-rn1dow26 221 11 aliquot aliquot NN cord-277909-rn1dow26 221 12 system system NN cord-277909-rn1dow26 221 13 and and CC cord-277909-rn1dow26 221 14 wastage wastage NN cord-277909-rn1dow26 221 15 will will MD cord-277909-rn1dow26 221 16 be be VB cord-277909-rn1dow26 221 17 more more RBR cord-277909-rn1dow26 221 18 expensive expensive JJ cord-277909-rn1dow26 221 19 as as IN cord-277909-rn1dow26 221 20 it -PRON- PRP cord-277909-rn1dow26 221 21 includes include VBZ cord-277909-rn1dow26 221 22 enzyme enzyme NN cord-277909-rn1dow26 221 23 . . . cord-277909-rn1dow26 222 1 Furthermore furthermore RB cord-277909-rn1dow26 222 2 , , , cord-277909-rn1dow26 222 3 any any DT cord-277909-rn1dow26 222 4 mistakes mistake NNS cord-277909-rn1dow26 222 5 in in IN cord-277909-rn1dow26 222 6 the the DT cord-277909-rn1dow26 222 7 making making NN cord-277909-rn1dow26 222 8 up up RP cord-277909-rn1dow26 222 9 of of IN cord-277909-rn1dow26 222 10 the the DT cord-277909-rn1dow26 222 11 aliquots aliquot NNS cord-277909-rn1dow26 222 12 will will MD cord-277909-rn1dow26 222 13 result result VB cord-277909-rn1dow26 222 14 in in IN cord-277909-rn1dow26 222 15 the the DT cord-277909-rn1dow26 222 16 loss loss NN cord-277909-rn1dow26 222 17 of of IN cord-277909-rn1dow26 222 18 primers primer NNS cord-277909-rn1dow26 222 19 and and CC cord-277909-rn1dow26 222 20 probe probe NN cord-277909-rn1dow26 222 21 and and CC cord-277909-rn1dow26 222 22 expensive expensive JJ cord-277909-rn1dow26 222 23 mastermix mastermix NNS cord-277909-rn1dow26 222 24 . . . cord-277909-rn1dow26 223 1 We -PRON- PRP cord-277909-rn1dow26 223 2 have have VBP cord-277909-rn1dow26 223 3 shown show VBN cord-277909-rn1dow26 223 4 , , , cord-277909-rn1dow26 223 5 using use VBG cord-277909-rn1dow26 223 6 positive positive JJ cord-277909-rn1dow26 223 7 controls control NNS cord-277909-rn1dow26 223 8 , , , cord-277909-rn1dow26 223 9 that that IN cord-277909-rn1dow26 223 10 both both CC cord-277909-rn1dow26 223 11 RNA RNA NNP cord-277909-rn1dow26 223 12 and and CC cord-277909-rn1dow26 223 13 DNA DNA NNP cord-277909-rn1dow26 223 14 mastermix mastermix NN cord-277909-rn1dow26 223 15 from from IN cord-277909-rn1dow26 223 16 a a DT cord-277909-rn1dow26 223 17 number number NN cord-277909-rn1dow26 223 18 of of IN cord-277909-rn1dow26 223 19 companies company NNS cord-277909-rn1dow26 223 20 ( ( -LRB- cord-277909-rn1dow26 223 21 Applied Applied NNP cord-277909-rn1dow26 223 22 Biosystems Biosystems NNP cord-277909-rn1dow26 223 23 , , , cord-277909-rn1dow26 223 24 Invitrogen Invitrogen NNP cord-277909-rn1dow26 223 25 , , , cord-277909-rn1dow26 223 26 and and CC cord-277909-rn1dow26 223 27 Qiagen Qiagen NNP cord-277909-rn1dow26 223 28 ) ) -RRB- cord-277909-rn1dow26 223 29 can can MD cord-277909-rn1dow26 223 30 be be VB cord-277909-rn1dow26 223 31 frozen freeze VBN cord-277909-rn1dow26 223 32 for for IN cord-277909-rn1dow26 223 33 at at RB cord-277909-rn1dow26 223 34 least least RBS cord-277909-rn1dow26 223 35 1 1 CD cord-277909-rn1dow26 223 36 month month NN cord-277909-rn1dow26 223 37 with with IN cord-277909-rn1dow26 223 38 no no DT cord-277909-rn1dow26 223 39 loss loss NN cord-277909-rn1dow26 223 40 of of IN cord-277909-rn1dow26 223 41 sensitivity sensitivity NN cord-277909-rn1dow26 223 42 . . . cord-277909-rn1dow26 224 1 Positive positive JJ cord-277909-rn1dow26 224 2 and and CC cord-277909-rn1dow26 224 3 negative negative JJ cord-277909-rn1dow26 224 4 controls control NNS cord-277909-rn1dow26 224 5 are be VBP cord-277909-rn1dow26 224 6 an an DT cord-277909-rn1dow26 224 7 essential essential JJ cord-277909-rn1dow26 224 8 part part NN cord-277909-rn1dow26 224 9 of of IN cord-277909-rn1dow26 224 10 any any DT cord-277909-rn1dow26 224 11 diagnostic diagnostic JJ cord-277909-rn1dow26 224 12 PCR PCR NNP cord-277909-rn1dow26 224 13 service service NN cord-277909-rn1dow26 224 14 . . . cord-277909-rn1dow26 225 1 Until until IN cord-277909-rn1dow26 225 2 recently recently RB cord-277909-rn1dow26 225 3 , , , cord-277909-rn1dow26 225 4 we -PRON- PRP cord-277909-rn1dow26 225 5 , , , cord-277909-rn1dow26 225 6 and and CC cord-277909-rn1dow26 225 7 many many JJ cord-277909-rn1dow26 225 8 other other JJ cord-277909-rn1dow26 225 9 laboratories laboratory NNS cord-277909-rn1dow26 225 10 , , , cord-277909-rn1dow26 225 11 utilised utilise VBN cord-277909-rn1dow26 225 12 two two CD cord-277909-rn1dow26 225 13 dilutions dilution NNS cord-277909-rn1dow26 225 14 of of IN cord-277909-rn1dow26 225 15 a a DT cord-277909-rn1dow26 225 16 positive positive JJ cord-277909-rn1dow26 225 17 control control NN cord-277909-rn1dow26 225 18 for for IN cord-277909-rn1dow26 225 19 each each DT cord-277909-rn1dow26 225 20 virus virus NN cord-277909-rn1dow26 225 21 to to TO cord-277909-rn1dow26 225 22 be be VB cord-277909-rn1dow26 225 23 tested test VBN cord-277909-rn1dow26 225 24 ( ( -LRB- cord-277909-rn1dow26 225 25 the the DT cord-277909-rn1dow26 225 26 end end NN cord-277909-rn1dow26 225 27 - - HYPH cord-277909-rn1dow26 225 28 point point NN cord-277909-rn1dow26 225 29 of of IN cord-277909-rn1dow26 225 30 a a DT cord-277909-rn1dow26 225 31 dilution dilution NN cord-277909-rn1dow26 225 32 series series NN cord-277909-rn1dow26 225 33 of of IN cord-277909-rn1dow26 225 34 cultured cultured JJ cord-277909-rn1dow26 225 35 virus virus NN cord-277909-rn1dow26 225 36 tested test VBN cord-277909-rn1dow26 225 37 in in IN cord-277909-rn1dow26 225 38 the the DT cord-277909-rn1dow26 225 39 relevant relevant JJ cord-277909-rn1dow26 225 40 assay assay NN cord-277909-rn1dow26 225 41 ( ( -LRB- cord-277909-rn1dow26 225 42 acting act VBG cord-277909-rn1dow26 225 43 as as IN cord-277909-rn1dow26 225 44 a a DT cord-277909-rn1dow26 225 45 sensitivity sensitivity NN cord-277909-rn1dow26 225 46 control control NN cord-277909-rn1dow26 225 47 ) ) -RRB- cord-277909-rn1dow26 225 48 and and CC cord-277909-rn1dow26 225 49 the the DT cord-277909-rn1dow26 225 50 dilution dilution NN cord-277909-rn1dow26 225 51 1 1 CD cord-277909-rn1dow26 225 52 log log NN cord-277909-rn1dow26 225 53 less less RBR cord-277909-rn1dow26 225 54 dilute dilute NN cord-277909-rn1dow26 225 55 ) ) -RRB- cord-277909-rn1dow26 225 56 . . . cord-277909-rn1dow26 226 1 As as IN cord-277909-rn1dow26 226 2 a a DT cord-277909-rn1dow26 226 3 result result NN cord-277909-rn1dow26 226 4 , , , cord-277909-rn1dow26 226 5 for for IN cord-277909-rn1dow26 226 6 each each DT cord-277909-rn1dow26 226 7 robot robot NN cord-277909-rn1dow26 226 8 extraction extraction NN cord-277909-rn1dow26 226 9 run run NN cord-277909-rn1dow26 226 10 of of IN cord-277909-rn1dow26 226 11 96 96 CD cord-277909-rn1dow26 226 12 wells well NNS cord-277909-rn1dow26 226 13 , , , cord-277909-rn1dow26 226 14 a a DT cord-277909-rn1dow26 226 15 substantial substantial JJ cord-277909-rn1dow26 226 16 number number NN cord-277909-rn1dow26 226 17 of of IN cord-277909-rn1dow26 226 18 wells well NNS cord-277909-rn1dow26 226 19 were be VBD cord-277909-rn1dow26 226 20 required require VBN cord-277909-rn1dow26 226 21 for for IN cord-277909-rn1dow26 226 22 the the DT cord-277909-rn1dow26 226 23 positive positive JJ cord-277909-rn1dow26 226 24 controls control NNS cord-277909-rn1dow26 226 25 alone alone RB cord-277909-rn1dow26 226 26 . . . cord-277909-rn1dow26 227 1 The the DT cord-277909-rn1dow26 227 2 inclusion inclusion NN cord-277909-rn1dow26 227 3 of of IN cord-277909-rn1dow26 227 4 negative negative JJ cord-277909-rn1dow26 227 5 extraction extraction NN cord-277909-rn1dow26 227 6 controls control NNS cord-277909-rn1dow26 227 7 further further RB cord-277909-rn1dow26 227 8 reduces reduce VBZ cord-277909-rn1dow26 227 9 the the DT cord-277909-rn1dow26 227 10 possible possible JJ cord-277909-rn1dow26 227 11 number number NN cord-277909-rn1dow26 227 12 of of IN cord-277909-rn1dow26 227 13 extractions extraction NNS cord-277909-rn1dow26 227 14 available available JJ cord-277909-rn1dow26 227 15 for for IN cord-277909-rn1dow26 227 16 samples sample NNS cord-277909-rn1dow26 227 17 . . . cord-277909-rn1dow26 228 1 The the DT cord-277909-rn1dow26 228 2 use use NN cord-277909-rn1dow26 228 3 of of IN cord-277909-rn1dow26 228 4 numerous numerous JJ cord-277909-rn1dow26 228 5 controls control NNS cord-277909-rn1dow26 228 6 increases increase VBZ cord-277909-rn1dow26 228 7 the the DT cord-277909-rn1dow26 228 8 cost cost NN cord-277909-rn1dow26 228 9 per per IN cord-277909-rn1dow26 228 10 sample sample NN cord-277909-rn1dow26 228 11 and and CC cord-277909-rn1dow26 228 12 the the DT cord-277909-rn1dow26 228 13 turnaround turnaround NN cord-277909-rn1dow26 228 14 times time NNS cord-277909-rn1dow26 228 15 of of IN cord-277909-rn1dow26 228 16 the the DT cord-277909-rn1dow26 228 17 service service NN cord-277909-rn1dow26 228 18 . . . cord-277909-rn1dow26 229 1 Pooled pool VBN cord-277909-rn1dow26 229 2 controls control NNS cord-277909-rn1dow26 229 3 are be VBP cord-277909-rn1dow26 229 4 a a DT cord-277909-rn1dow26 229 5 significant significant JJ cord-277909-rn1dow26 229 6 improvement improvement NN cord-277909-rn1dow26 229 7 on on IN cord-277909-rn1dow26 229 8 the the DT cord-277909-rn1dow26 229 9 previous previous JJ cord-277909-rn1dow26 229 10 method method NN cord-277909-rn1dow26 229 11 and and CC cord-277909-rn1dow26 229 12 we -PRON- PRP cord-277909-rn1dow26 229 13 now now RB cord-277909-rn1dow26 229 14 use use VBP cord-277909-rn1dow26 229 15 separate separate JJ cord-277909-rn1dow26 229 16 pools pool NNS cord-277909-rn1dow26 229 17 containing contain VBG cord-277909-rn1dow26 229 18 12 12 CD cord-277909-rn1dow26 229 19 respiratory respiratory JJ cord-277909-rn1dow26 229 20 viruses virus NNS cord-277909-rn1dow26 229 21 , , , cord-277909-rn1dow26 229 22 and and CC cord-277909-rn1dow26 229 23 6 6 CD cord-277909-rn1dow26 229 24 gastrointestinal gastrointestinal JJ cord-277909-rn1dow26 229 25 pathogens pathogen NNS cord-277909-rn1dow26 229 26 . . . cord-277909-rn1dow26 230 1 In in IN cord-277909-rn1dow26 230 2 order order NN cord-277909-rn1dow26 230 3 to to TO cord-277909-rn1dow26 230 4 develop develop VB cord-277909-rn1dow26 230 5 a a DT cord-277909-rn1dow26 230 6 pooled pool VBN cord-277909-rn1dow26 230 7 respiratory respiratory JJ cord-277909-rn1dow26 230 8 or or CC cord-277909-rn1dow26 230 9 gastrointestinal gastrointestinal JJ cord-277909-rn1dow26 230 10 control control NN cord-277909-rn1dow26 230 11 , , , cord-277909-rn1dow26 230 12 each each DT cord-277909-rn1dow26 230 13 virus virus NN cord-277909-rn1dow26 230 14 culture culture NN cord-277909-rn1dow26 230 15 or or CC cord-277909-rn1dow26 230 16 stool stool NN cord-277909-rn1dow26 230 17 extract extract NN cord-277909-rn1dow26 230 18 was be VBD cord-277909-rn1dow26 230 19 serially serially RB cord-277909-rn1dow26 230 20 diluted dilute VBN cord-277909-rn1dow26 230 21 and and CC cord-277909-rn1dow26 230 22 Table Table NNP cord-277909-rn1dow26 230 23 7 7 CD cord-277909-rn1dow26 230 24 Ct Ct NNP cord-277909-rn1dow26 230 25 of of IN cord-277909-rn1dow26 230 26 positive positive JJ cord-277909-rn1dow26 230 27 control control NN cord-277909-rn1dow26 230 28 on on IN cord-277909-rn1dow26 230 29 frozen frozen JJ cord-277909-rn1dow26 230 30 primer primer NN cord-277909-rn1dow26 230 31 / / SYM cord-277909-rn1dow26 230 32 probe probe NN cord-277909-rn1dow26 230 33 pools pool NNS cord-277909-rn1dow26 230 34 at at IN cord-277909-rn1dow26 230 35 4 4 CD cord-277909-rn1dow26 230 36 , , , cord-277909-rn1dow26 230 37 6 6 CD cord-277909-rn1dow26 230 38 and and CC cord-277909-rn1dow26 230 39 8 8 CD cord-277909-rn1dow26 230 40 weeks week NNS cord-277909-rn1dow26 230 41 an an DT cord-277909-rn1dow26 230 42 end end NN cord-277909-rn1dow26 230 43 point point NN cord-277909-rn1dow26 230 44 established establish VBN cord-277909-rn1dow26 230 45 . . . cord-277909-rn1dow26 231 1 For for IN cord-277909-rn1dow26 231 2 the the DT cord-277909-rn1dow26 231 3 respiratory respiratory JJ cord-277909-rn1dow26 231 4 virus virus NN cord-277909-rn1dow26 231 5 control control VBP cord-277909-rn1dow26 231 6 a a DT cord-277909-rn1dow26 231 7 ' ' `` cord-277909-rn1dow26 231 8 High high JJ cord-277909-rn1dow26 231 9 ' ' '' cord-277909-rn1dow26 231 10 positive positive JJ cord-277909-rn1dow26 231 11 control control NN cord-277909-rn1dow26 231 12 pool pool NN cord-277909-rn1dow26 231 13 was be VBD cord-277909-rn1dow26 231 14 prepared prepare VBN cord-277909-rn1dow26 231 15 by by IN cord-277909-rn1dow26 231 16 adding add VBG cord-277909-rn1dow26 231 17 an an DT cord-277909-rn1dow26 231 18 equal equal JJ cord-277909-rn1dow26 231 19 volume volume NN cord-277909-rn1dow26 231 20 of of IN cord-277909-rn1dow26 231 21 the the DT cord-277909-rn1dow26 231 22 dilution dilution NN cord-277909-rn1dow26 231 23 2 2 CD cord-277909-rn1dow26 231 24 logs log NNS cord-277909-rn1dow26 231 25 above above IN cord-277909-rn1dow26 231 26 the the DT cord-277909-rn1dow26 231 27 end end NN cord-277909-rn1dow26 231 28 point point NN cord-277909-rn1dow26 231 29 for for IN cord-277909-rn1dow26 231 30 each each DT cord-277909-rn1dow26 231 31 of of IN cord-277909-rn1dow26 231 32 the the DT cord-277909-rn1dow26 231 33 12 12 CD cord-277909-rn1dow26 231 34 culture culture NN cord-277909-rn1dow26 231 35 fluids fluid NNS cord-277909-rn1dow26 231 36 . . . cord-277909-rn1dow26 232 1 A a DT cord-277909-rn1dow26 232 2 further further JJ cord-277909-rn1dow26 232 3 1 1 CD cord-277909-rn1dow26 232 4 in in IN cord-277909-rn1dow26 232 5 10 10 CD cord-277909-rn1dow26 232 6 dilution dilution NN cord-277909-rn1dow26 232 7 of of IN cord-277909-rn1dow26 232 8 this this DT cord-277909-rn1dow26 232 9 ' ' `` cord-277909-rn1dow26 232 10 High high JJ cord-277909-rn1dow26 232 11 ' ' '' cord-277909-rn1dow26 232 12 positive positive JJ cord-277909-rn1dow26 232 13 control control NN cord-277909-rn1dow26 232 14 was be VBD cord-277909-rn1dow26 232 15 prepared prepared JJ cord-277909-rn1dow26 232 16 to to TO cord-277909-rn1dow26 232 17 produce produce VB cord-277909-rn1dow26 232 18 the the DT cord-277909-rn1dow26 232 19 ' ' `` cord-277909-rn1dow26 232 20 Low low JJ cord-277909-rn1dow26 232 21 ' ' '' cord-277909-rn1dow26 232 22 positive positive JJ cord-277909-rn1dow26 232 23 control control NN cord-277909-rn1dow26 232 24 . . . cord-277909-rn1dow26 233 1 We -PRON- PRP cord-277909-rn1dow26 233 2 now now RB cord-277909-rn1dow26 233 3 include include VBP cord-277909-rn1dow26 233 4 just just RB cord-277909-rn1dow26 233 5 two two CD cord-277909-rn1dow26 233 6 respiratory respiratory JJ cord-277909-rn1dow26 233 7 controls control NNS cord-277909-rn1dow26 233 8 on on IN cord-277909-rn1dow26 233 9 our -PRON- PRP$ cord-277909-rn1dow26 233 10 robot robot NN cord-277909-rn1dow26 233 11 extractions extraction NNS cord-277909-rn1dow26 233 12 , , , cord-277909-rn1dow26 233 13 freeing free VBG cord-277909-rn1dow26 233 14 up up RP cord-277909-rn1dow26 233 15 an an DT cord-277909-rn1dow26 233 16 additional additional JJ cord-277909-rn1dow26 233 17 22 22 CD cord-277909-rn1dow26 233 18 wells well NNS cord-277909-rn1dow26 233 19 for for IN cord-277909-rn1dow26 233 20 other other JJ cord-277909-rn1dow26 233 21 samples sample NNS cord-277909-rn1dow26 233 22 . . . cord-277909-rn1dow26 234 1 The the DT cord-277909-rn1dow26 234 2 preparation preparation NN cord-277909-rn1dow26 234 3 of of IN cord-277909-rn1dow26 234 4 a a DT cord-277909-rn1dow26 234 5 large large JJ cord-277909-rn1dow26 234 6 volume volume NN cord-277909-rn1dow26 234 7 of of IN cord-277909-rn1dow26 234 8 control control NN cord-277909-rn1dow26 234 9 at at IN cord-277909-rn1dow26 234 10 the the DT cord-277909-rn1dow26 234 11 one one CD cord-277909-rn1dow26 234 12 time time NN cord-277909-rn1dow26 234 13 allowed allow VBN cord-277909-rn1dow26 234 14 better well JJR cord-277909-rn1dow26 234 15 QC QC NNP cord-277909-rn1dow26 234 16 and and CC cord-277909-rn1dow26 234 17 reproducibility reproducibility NN cord-277909-rn1dow26 234 18 to to TO cord-277909-rn1dow26 234 19 be be VB cord-277909-rn1dow26 234 20 achieved achieve VBN cord-277909-rn1dow26 234 21 . . . cord-277909-rn1dow26 235 1 Aliquots Aliquots NNP cord-277909-rn1dow26 235 2 of of IN cord-277909-rn1dow26 235 3 control control NN cord-277909-rn1dow26 235 4 are be VBP cord-277909-rn1dow26 235 5 stored store VBN cord-277909-rn1dow26 235 6 at at IN cord-277909-rn1dow26 235 7 −70 −70 NNP cord-277909-rn1dow26 235 8 • • NN cord-277909-rn1dow26 235 9 C C NNP cord-277909-rn1dow26 235 10 and and CC cord-277909-rn1dow26 235 11 have have VBP cord-277909-rn1dow26 235 12 been be VBN cord-277909-rn1dow26 235 13 found find VBN cord-277909-rn1dow26 235 14 to to TO cord-277909-rn1dow26 235 15 be be VB cord-277909-rn1dow26 235 16 stable stable JJ cord-277909-rn1dow26 235 17 for for IN cord-277909-rn1dow26 235 18 up up IN cord-277909-rn1dow26 235 19 to to TO cord-277909-rn1dow26 235 20 3 3 CD cord-277909-rn1dow26 235 21 months month NNS cord-277909-rn1dow26 235 22 so so RB cord-277909-rn1dow26 235 23 far far RB cord-277909-rn1dow26 235 24 . . . cord-277909-rn1dow26 236 1 We -PRON- PRP cord-277909-rn1dow26 236 2 have have VBP cord-277909-rn1dow26 236 3 previously previously RB cord-277909-rn1dow26 236 4 experienced experience VBN cord-277909-rn1dow26 236 5 lot lot NN cord-277909-rn1dow26 236 6 - - HYPH cord-277909-rn1dow26 236 7 to to IN cord-277909-rn1dow26 236 8 - - HYPH cord-277909-rn1dow26 236 9 lot lot NN cord-277909-rn1dow26 236 10 variation variation NN cord-277909-rn1dow26 236 11 of of IN cord-277909-rn1dow26 236 12 both both DT cord-277909-rn1dow26 236 13 primers primer NNS cord-277909-rn1dow26 236 14 and and CC cord-277909-rn1dow26 236 15 probes probe NNS cord-277909-rn1dow26 236 16 resulting result VBG cord-277909-rn1dow26 236 17 in in IN cord-277909-rn1dow26 236 18 reductions reduction NNS cord-277909-rn1dow26 236 19 in in IN cord-277909-rn1dow26 236 20 test test NN cord-277909-rn1dow26 236 21 sensitivity sensitivity NN cord-277909-rn1dow26 236 22 . . . cord-277909-rn1dow26 237 1 When when WRB cord-277909-rn1dow26 237 2 a a DT cord-277909-rn1dow26 237 3 new new JJ cord-277909-rn1dow26 237 4 batch batch NN cord-277909-rn1dow26 237 5 of of IN cord-277909-rn1dow26 237 6 reagents reagent NNS cord-277909-rn1dow26 237 7 is be VBZ cord-277909-rn1dow26 237 8 purchased purchase VBN cord-277909-rn1dow26 237 9 we -PRON- PRP cord-277909-rn1dow26 237 10 now now RB cord-277909-rn1dow26 237 11 run run VBP cord-277909-rn1dow26 237 12 a a DT cord-277909-rn1dow26 237 13 performance performance NN cord-277909-rn1dow26 237 14 test test NN cord-277909-rn1dow26 237 15 ( ( -LRB- cord-277909-rn1dow26 237 16 using use VBG cord-277909-rn1dow26 237 17 the the DT cord-277909-rn1dow26 237 18 new new JJ cord-277909-rn1dow26 237 19 reagents reagent NNS cord-277909-rn1dow26 237 20 at at IN cord-277909-rn1dow26 237 21 the the DT cord-277909-rn1dow26 237 22 same same JJ cord-277909-rn1dow26 237 23 concentrations concentration NNS cord-277909-rn1dow26 237 24 previously previously RB cord-277909-rn1dow26 237 25 determined determine VBN cord-277909-rn1dow26 237 26 as as IN cord-277909-rn1dow26 237 27 optimal optimal JJ cord-277909-rn1dow26 237 28 ) ) -RRB- cord-277909-rn1dow26 237 29 by by IN cord-277909-rn1dow26 237 30 testing test VBG cord-277909-rn1dow26 237 31 the the DT cord-277909-rn1dow26 237 32 ' ' `` cord-277909-rn1dow26 237 33 old old JJ cord-277909-rn1dow26 237 34 ' ' '' cord-277909-rn1dow26 237 35 and and CC cord-277909-rn1dow26 237 36 ' ' `` cord-277909-rn1dow26 237 37 new new JJ cord-277909-rn1dow26 237 38 ' ' '' cord-277909-rn1dow26 237 39 primer primer NN cord-277909-rn1dow26 237 40 probe probe NN cord-277909-rn1dow26 237 41 sets set NNS cord-277909-rn1dow26 237 42 in in IN cord-277909-rn1dow26 237 43 parallel parallel NN cord-277909-rn1dow26 237 44 with with IN cord-277909-rn1dow26 237 45 the the DT cord-277909-rn1dow26 237 46 same same JJ cord-277909-rn1dow26 237 47 positive positive JJ cord-277909-rn1dow26 237 48 control control NN cord-277909-rn1dow26 237 49 on on IN cord-277909-rn1dow26 237 50 the the DT cord-277909-rn1dow26 237 51 same same JJ cord-277909-rn1dow26 237 52 PCR PCR NNP cord-277909-rn1dow26 237 53 run run NN cord-277909-rn1dow26 237 54 . . . cord-277909-rn1dow26 238 1 If if IN cord-277909-rn1dow26 238 2 the the DT cord-277909-rn1dow26 238 3 C C NNP cord-277909-rn1dow26 238 4 T T NNP cord-277909-rn1dow26 238 5 and and CC cord-277909-rn1dow26 238 6 R r NN cord-277909-rn1dow26 238 7 n n CD cord-277909-rn1dow26 238 8 values value NNS cord-277909-rn1dow26 238 9 observed observe VBN cord-277909-rn1dow26 238 10 are be VBP cord-277909-rn1dow26 238 11 comparable comparable JJ cord-277909-rn1dow26 238 12 ( ( -LRB- cord-277909-rn1dow26 238 13 newly newly RB cord-277909-rn1dow26 238 14 prepared prepare VBN cord-277909-rn1dow26 238 15 reagents reagent NNS cord-277909-rn1dow26 238 16 must must MD cord-277909-rn1dow26 238 17 produce produce VB cord-277909-rn1dow26 238 18 C C NNP cord-277909-rn1dow26 238 19 T t NN cord-277909-rn1dow26 238 20 values value NNS cord-277909-rn1dow26 238 21 falling fall VBG cord-277909-rn1dow26 238 22 within within IN cord-277909-rn1dow26 238 23 two two CD cord-277909-rn1dow26 238 24 standard standard JJ cord-277909-rn1dow26 238 25 deviations deviation NNS cord-277909-rn1dow26 238 26 of of IN cord-277909-rn1dow26 238 27 the the DT cord-277909-rn1dow26 238 28 mean mean JJ cord-277909-rn1dow26 238 29 value value NN cord-277909-rn1dow26 238 30 determined determine VBN cord-277909-rn1dow26 238 31 for for IN cord-277909-rn1dow26 238 32 the the DT cord-277909-rn1dow26 238 33 reagents reagent NNS cord-277909-rn1dow26 238 34 previously previously RB cord-277909-rn1dow26 238 35 in in IN cord-277909-rn1dow26 238 36 use use NN cord-277909-rn1dow26 238 37 ( ( -LRB- cord-277909-rn1dow26 238 38 when when WRB cord-277909-rn1dow26 238 39 testing test VBG cord-277909-rn1dow26 238 40 identical identical JJ cord-277909-rn1dow26 238 41 positive positive JJ cord-277909-rn1dow26 238 42 controls control NNS cord-277909-rn1dow26 238 43 ) ) -RRB- cord-277909-rn1dow26 238 44 , , , cord-277909-rn1dow26 238 45 the the DT cord-277909-rn1dow26 238 46 new new JJ cord-277909-rn1dow26 238 47 reagents reagent NNS cord-277909-rn1dow26 238 48 are be VBP cord-277909-rn1dow26 238 49 released release VBN cord-277909-rn1dow26 238 50 for for IN cord-277909-rn1dow26 238 51 routine routine JJ cord-277909-rn1dow26 238 52 use use NN cord-277909-rn1dow26 238 53 . . . cord-277909-rn1dow26 239 1 If if IN cord-277909-rn1dow26 239 2 the the DT cord-277909-rn1dow26 239 3 assay assay NN cord-277909-rn1dow26 239 4 is be VBZ cord-277909-rn1dow26 239 5 less less RBR cord-277909-rn1dow26 239 6 sensitive sensitive JJ cord-277909-rn1dow26 239 7 than than IN cord-277909-rn1dow26 239 8 the the DT cord-277909-rn1dow26 239 9 previous previous JJ cord-277909-rn1dow26 239 10 assay assay NN cord-277909-rn1dow26 239 11 then then RB cord-277909-rn1dow26 239 12 primer primer VB cord-277909-rn1dow26 239 13 and/or and/or CC cord-277909-rn1dow26 239 14 probe probe NN cord-277909-rn1dow26 239 15 optimisation optimisation NN cord-277909-rn1dow26 239 16 should should MD cord-277909-rn1dow26 239 17 take take VB cord-277909-rn1dow26 239 18 place place NN cord-277909-rn1dow26 239 19 . . . cord-277909-rn1dow26 240 1 Ideally ideally RB cord-277909-rn1dow26 240 2 this this DT cord-277909-rn1dow26 240 3 should should MD cord-277909-rn1dow26 240 4 be be VB cord-277909-rn1dow26 240 5 done do VBN cord-277909-rn1dow26 240 6 several several JJ cord-277909-rn1dow26 240 7 weeks week NNS cord-277909-rn1dow26 240 8 before before IN cord-277909-rn1dow26 240 9 the the DT cord-277909-rn1dow26 240 10 next next JJ cord-277909-rn1dow26 240 11 batch batch NN cord-277909-rn1dow26 240 12 is be VBZ cord-277909-rn1dow26 240 13 required require VBN cord-277909-rn1dow26 240 14 for for IN cord-277909-rn1dow26 240 15 routine routine JJ cord-277909-rn1dow26 240 16 use use NN cord-277909-rn1dow26 240 17 as as IN cord-277909-rn1dow26 240 18 new new JJ cord-277909-rn1dow26 240 19 probes probe NNS cord-277909-rn1dow26 240 20 or or CC cord-277909-rn1dow26 240 21 primers primer NNS cord-277909-rn1dow26 240 22 may may MD cord-277909-rn1dow26 240 23 need need VB cord-277909-rn1dow26 240 24 to to TO cord-277909-rn1dow26 240 25 be be VB cord-277909-rn1dow26 240 26 re re VBN cord-277909-rn1dow26 240 27 - - VBN cord-277909-rn1dow26 240 28 ordered order VBN cord-277909-rn1dow26 240 29 . . . cord-277909-rn1dow26 241 1 Our -PRON- PRP$ cord-277909-rn1dow26 241 2 experience experience NN cord-277909-rn1dow26 241 3 over over IN cord-277909-rn1dow26 241 4 the the DT cord-277909-rn1dow26 241 5 winter winter NN cord-277909-rn1dow26 241 6 of of IN cord-277909-rn1dow26 241 7 2004 2004 CD cord-277909-rn1dow26 241 8 - - SYM cord-277909-rn1dow26 241 9 2005 2005 CD cord-277909-rn1dow26 241 10 is be VBZ cord-277909-rn1dow26 241 11 that that IN cord-277909-rn1dow26 241 12 re re NN cord-277909-rn1dow26 241 13 - - NN cord-277909-rn1dow26 241 14 optimisation optimisation NN cord-277909-rn1dow26 241 15 has have VBZ cord-277909-rn1dow26 241 16 not not RB cord-277909-rn1dow26 241 17 been be VBN cord-277909-rn1dow26 241 18 required require VBN cord-277909-rn1dow26 241 19 for for IN cord-277909-rn1dow26 241 20 any any DT cord-277909-rn1dow26 241 21 of of IN cord-277909-rn1dow26 241 22 the the DT cord-277909-rn1dow26 241 23 respiratory respiratory JJ cord-277909-rn1dow26 241 24 assays assay NNS cord-277909-rn1dow26 241 25 . . . cord-277909-rn1dow26 242 1 For for IN cord-277909-rn1dow26 242 2 validation validation NN cord-277909-rn1dow26 242 3 of of IN cord-277909-rn1dow26 242 4 each each DT cord-277909-rn1dow26 242 5 real real JJ cord-277909-rn1dow26 242 6 time time NN cord-277909-rn1dow26 242 7 PCR PCR NNP cord-277909-rn1dow26 242 8 run run VBN cord-277909-rn1dow26 242 9 we -PRON- PRP cord-277909-rn1dow26 242 10 recommend recommend VBP cord-277909-rn1dow26 242 11 the the DT cord-277909-rn1dow26 242 12 following following NN cord-277909-rn1dow26 242 13 . . . cord-277909-rn1dow26 243 1 The the DT cord-277909-rn1dow26 243 2 C C NNP cord-277909-rn1dow26 243 3 T t NN cord-277909-rn1dow26 243 4 of of IN cord-277909-rn1dow26 243 5 the the DT cord-277909-rn1dow26 243 6 positive positive JJ cord-277909-rn1dow26 243 7 control control NN cord-277909-rn1dow26 243 8 should should MD cord-277909-rn1dow26 243 9 be be VB cord-277909-rn1dow26 243 10 documented document VBN cord-277909-rn1dow26 243 11 with with IN cord-277909-rn1dow26 243 12 each each DT cord-277909-rn1dow26 243 13 run run NN cord-277909-rn1dow26 243 14 and and CC cord-277909-rn1dow26 243 15 compared compare VBN cord-277909-rn1dow26 243 16 to to IN cord-277909-rn1dow26 243 17 the the DT cord-277909-rn1dow26 243 18 value value NN cord-277909-rn1dow26 243 19 derived derive VBN cord-277909-rn1dow26 243 20 from from IN cord-277909-rn1dow26 243 21 previous previous JJ cord-277909-rn1dow26 243 22 runs run NNS cord-277909-rn1dow26 243 23 . . . cord-277909-rn1dow26 244 1 This this DT cord-277909-rn1dow26 244 2 should should MD cord-277909-rn1dow26 244 3 help help VB cord-277909-rn1dow26 244 4 identify identify VB cord-277909-rn1dow26 244 5 any any DT cord-277909-rn1dow26 244 6 loss loss NN cord-277909-rn1dow26 244 7 in in IN cord-277909-rn1dow26 244 8 sensitivity sensitivity NN cord-277909-rn1dow26 244 9 that that WDT cord-277909-rn1dow26 244 10 can can MD cord-277909-rn1dow26 244 11 be be VB cord-277909-rn1dow26 244 12 seen see VBN cord-277909-rn1dow26 244 13 due due IN cord-277909-rn1dow26 244 14 to to IN cord-277909-rn1dow26 244 15 user user NN cord-277909-rn1dow26 244 16 error error NN cord-277909-rn1dow26 244 17 or or CC cord-277909-rn1dow26 244 18 degradation degradation NN cord-277909-rn1dow26 244 19 of of IN cord-277909-rn1dow26 244 20 PCR PCR NNP cord-277909-rn1dow26 244 21 reagents reagent NNS cord-277909-rn1dow26 244 22 . . . cord-277909-rn1dow26 245 1 If if IN cord-277909-rn1dow26 245 2 the the DT cord-277909-rn1dow26 245 3 C c NN cord-277909-rn1dow26 245 4 T T NNP cord-277909-rn1dow26 245 5 falls fall VBZ cord-277909-rn1dow26 245 6 significantly significantly RB cord-277909-rn1dow26 245 7 below below IN cord-277909-rn1dow26 245 8 the the DT cord-277909-rn1dow26 245 9 expected expect VBN cord-277909-rn1dow26 245 10 value value NN cord-277909-rn1dow26 245 11 the the DT cord-277909-rn1dow26 245 12 run run NN cord-277909-rn1dow26 245 13 should should MD cord-277909-rn1dow26 245 14 be be VB cord-277909-rn1dow26 245 15 repeated repeat VBN cord-277909-rn1dow26 245 16 ( ( -LRB- cord-277909-rn1dow26 245 17 outwith outwith IN cord-277909-rn1dow26 245 18 two two CD cord-277909-rn1dow26 245 19 standard standard JJ cord-277909-rn1dow26 245 20 deviations deviation NNS cord-277909-rn1dow26 245 21 of of IN cord-277909-rn1dow26 245 22 the the DT cord-277909-rn1dow26 245 23 mean mean JJ cord-277909-rn1dow26 245 24 value value NN cord-277909-rn1dow26 245 25 determined determine VBN cord-277909-rn1dow26 245 26 by by IN cord-277909-rn1dow26 245 27 previous previous JJ cord-277909-rn1dow26 245 28 runs run NNS cord-277909-rn1dow26 245 29 ( ( -LRB- cord-277909-rn1dow26 245 30 when when WRB cord-277909-rn1dow26 245 31 testing test VBG cord-277909-rn1dow26 245 32 identical identical JJ cord-277909-rn1dow26 245 33 positive positive JJ cord-277909-rn1dow26 245 34 controls control NNS cord-277909-rn1dow26 245 35 ) ) -RRB- cord-277909-rn1dow26 245 36 . . . cord-277909-rn1dow26 246 1 If if IN cord-277909-rn1dow26 246 2 the the DT cord-277909-rn1dow26 246 3 C c NN cord-277909-rn1dow26 246 4 T t NN cord-277909-rn1dow26 246 5 remains remain VBZ cord-277909-rn1dow26 246 6 low low JJ cord-277909-rn1dow26 246 7 or or CC cord-277909-rn1dow26 246 8 reduces reduce VBZ cord-277909-rn1dow26 246 9 further further RB cord-277909-rn1dow26 246 10 , , , cord-277909-rn1dow26 246 11 new new JJ cord-277909-rn1dow26 246 12 controls control NNS cord-277909-rn1dow26 246 13 and and CC cord-277909-rn1dow26 246 14 PCR PCR NNP cord-277909-rn1dow26 246 15 reagents reagent NNS cord-277909-rn1dow26 246 16 may may MD cord-277909-rn1dow26 246 17 be be VB cord-277909-rn1dow26 246 18 required require VBN cord-277909-rn1dow26 246 19 . . . cord-277909-rn1dow26 247 1 In in IN cord-277909-rn1dow26 247 2 addition addition NN cord-277909-rn1dow26 247 3 to to IN cord-277909-rn1dow26 247 4 this this DT cord-277909-rn1dow26 247 5 the the DT cord-277909-rn1dow26 247 6 overall overall JJ cord-277909-rn1dow26 247 7 fluorescence fluorescence NN cord-277909-rn1dow26 247 8 change change NN cord-277909-rn1dow26 247 9 should should MD cord-277909-rn1dow26 247 10 also also RB cord-277909-rn1dow26 247 11 be be VB cord-277909-rn1dow26 247 12 monitored monitor VBN cord-277909-rn1dow26 247 13 with with IN cord-277909-rn1dow26 247 14 each each DT cord-277909-rn1dow26 247 15 run run NN cord-277909-rn1dow26 247 16 . . . cord-277909-rn1dow26 248 1 Reductions reduction NNS cord-277909-rn1dow26 248 2 in in IN cord-277909-rn1dow26 248 3 fluorescence fluorescence NN cord-277909-rn1dow26 248 4 may may MD cord-277909-rn1dow26 248 5 cause cause VB cord-277909-rn1dow26 248 6 interpretation interpretation NN cord-277909-rn1dow26 248 7 difficulties difficulty NNS cord-277909-rn1dow26 248 8 and and CC cord-277909-rn1dow26 248 9 may may MD cord-277909-rn1dow26 248 10 also also RB cord-277909-rn1dow26 248 11 highlight highlight VB cord-277909-rn1dow26 248 12 a a DT cord-277909-rn1dow26 248 13 problem problem NN cord-277909-rn1dow26 248 14 in in IN cord-277909-rn1dow26 248 15 the the DT cord-277909-rn1dow26 248 16 PCR PCR NNP cord-277909-rn1dow26 248 17 reaction reaction NN cord-277909-rn1dow26 248 18 . . . cord-277909-rn1dow26 249 1 As as IN cord-277909-rn1dow26 249 2 with with IN cord-277909-rn1dow26 249 3 changes change NNS cord-277909-rn1dow26 249 4 in in IN cord-277909-rn1dow26 249 5 C C NNP cord-277909-rn1dow26 249 6 T T NNP cord-277909-rn1dow26 249 7 , , , cord-277909-rn1dow26 249 8 large large JJ cord-277909-rn1dow26 249 9 reductions reduction NNS cord-277909-rn1dow26 249 10 in in IN cord-277909-rn1dow26 249 11 fluorescence fluorescence NN cord-277909-rn1dow26 249 12 may may MD cord-277909-rn1dow26 249 13 result result VB cord-277909-rn1dow26 249 14 in in IN cord-277909-rn1dow26 249 15 the the DT cord-277909-rn1dow26 249 16 need need NN cord-277909-rn1dow26 249 17 to to TO cord-277909-rn1dow26 249 18 repeat repeat VB cord-277909-rn1dow26 249 19 the the DT cord-277909-rn1dow26 249 20 PCR PCR NNP cord-277909-rn1dow26 249 21 or or CC cord-277909-rn1dow26 249 22 introduce introduce VB cord-277909-rn1dow26 249 23 a a DT cord-277909-rn1dow26 249 24 new new JJ cord-277909-rn1dow26 249 25 batch batch NN cord-277909-rn1dow26 249 26 of of IN cord-277909-rn1dow26 249 27 controls control NNS cord-277909-rn1dow26 249 28 and and CC cord-277909-rn1dow26 249 29 PCR PCR NNP cord-277909-rn1dow26 249 30 reagents reagent NNS cord-277909-rn1dow26 249 31 . . . cord-277909-rn1dow26 250 1 Ideally ideally RB cord-277909-rn1dow26 250 2 real real JJ cord-277909-rn1dow26 250 3 time time NN cord-277909-rn1dow26 250 4 PCR PCR NNP cord-277909-rn1dow26 250 5 tests test NNS cord-277909-rn1dow26 250 6 should should MD cord-277909-rn1dow26 250 7 include include VB cord-277909-rn1dow26 250 8 an an DT cord-277909-rn1dow26 250 9 internal internal JJ cord-277909-rn1dow26 250 10 control control NN cord-277909-rn1dow26 250 11 in in IN cord-277909-rn1dow26 250 12 order order NN cord-277909-rn1dow26 250 13 to to TO cord-277909-rn1dow26 250 14 ensure ensure VB cord-277909-rn1dow26 250 15 confidence confidence NN cord-277909-rn1dow26 250 16 in in IN cord-277909-rn1dow26 250 17 negative negative JJ cord-277909-rn1dow26 250 18 results result NNS cord-277909-rn1dow26 250 19 . . . cord-277909-rn1dow26 251 1 There there EX cord-277909-rn1dow26 251 2 are be VBP cord-277909-rn1dow26 251 3 many many JJ cord-277909-rn1dow26 251 4 internal internal JJ cord-277909-rn1dow26 251 5 control control NN cord-277909-rn1dow26 251 6 PCR PCR NNP cord-277909-rn1dow26 251 7 tests test NNS cord-277909-rn1dow26 251 8 available available JJ cord-277909-rn1dow26 251 9 targeting target VBG cord-277909-rn1dow26 251 10 animal animal NN cord-277909-rn1dow26 251 11 viruses virus NNS cord-277909-rn1dow26 251 12 ( ( -LRB- cord-277909-rn1dow26 251 13 added add VBN cord-277909-rn1dow26 251 14 to to IN cord-277909-rn1dow26 251 15 the the DT cord-277909-rn1dow26 251 16 sample sample NN cord-277909-rn1dow26 251 17 before before IN cord-277909-rn1dow26 251 18 extraction extraction NN cord-277909-rn1dow26 251 19 ) ) -RRB- cord-277909-rn1dow26 251 20 and and CC cord-277909-rn1dow26 251 21 synthetic synthetic JJ cord-277909-rn1dow26 251 22 controls control NNS cord-277909-rn1dow26 251 23 ( ( -LRB- cord-277909-rn1dow26 251 24 which which WDT cord-277909-rn1dow26 251 25 are be VBP cord-277909-rn1dow26 251 26 added add VBN cord-277909-rn1dow26 251 27 to to IN cord-277909-rn1dow26 251 28 the the DT cord-277909-rn1dow26 251 29 mastremix mastremix NNP cord-277909-rn1dow26 251 30 ) ) -RRB- cord-277909-rn1dow26 251 31 , , , cord-277909-rn1dow26 251 32 and and CC cord-277909-rn1dow26 251 33 human human JJ cord-277909-rn1dow26 251 34 genes gene NNS cord-277909-rn1dow26 251 35 . . . cord-277909-rn1dow26 252 1 However however RB cord-277909-rn1dow26 252 2 , , , cord-277909-rn1dow26 252 3 the the DT cord-277909-rn1dow26 252 4 inclusion inclusion NN cord-277909-rn1dow26 252 5 of of IN cord-277909-rn1dow26 252 6 such such JJ cord-277909-rn1dow26 252 7 controls control NNS cord-277909-rn1dow26 252 8 can can MD cord-277909-rn1dow26 252 9 be be VB cord-277909-rn1dow26 252 10 expensive expensive JJ cord-277909-rn1dow26 252 11 as as IN cord-277909-rn1dow26 252 12 they -PRON- PRP cord-277909-rn1dow26 252 13 may may MD cord-277909-rn1dow26 252 14 have have VB cord-277909-rn1dow26 252 15 to to TO cord-277909-rn1dow26 252 16 be be VB cord-277909-rn1dow26 252 17 carried carry VBN cord-277909-rn1dow26 252 18 out out RP cord-277909-rn1dow26 252 19 separately separately RB cord-277909-rn1dow26 252 20 from from IN cord-277909-rn1dow26 252 21 the the DT cord-277909-rn1dow26 252 22 diagnostic diagnostic JJ cord-277909-rn1dow26 252 23 assay assay NN cord-277909-rn1dow26 252 24 . . . cord-277909-rn1dow26 253 1 As as IN cord-277909-rn1dow26 253 2 a a DT cord-277909-rn1dow26 253 3 result result NN cord-277909-rn1dow26 253 4 many many JJ cord-277909-rn1dow26 253 5 laboratories laboratory NNS cord-277909-rn1dow26 253 6 ( ( -LRB- cord-277909-rn1dow26 253 7 including include VBG cord-277909-rn1dow26 253 8 ourselves -PRON- PRP cord-277909-rn1dow26 253 9 ) ) -RRB- cord-277909-rn1dow26 253 10 do do VBP cord-277909-rn1dow26 253 11 not not RB cord-277909-rn1dow26 253 12 use use VB cord-277909-rn1dow26 253 13 such such JJ cord-277909-rn1dow26 253 14 controls control NNS cord-277909-rn1dow26 253 15 on on IN cord-277909-rn1dow26 253 16 all all DT cord-277909-rn1dow26 253 17 tests test NNS cord-277909-rn1dow26 253 18 . . . cord-277909-rn1dow26 254 1 Any any DT cord-277909-rn1dow26 254 2 laboratories laboratory NNS cord-277909-rn1dow26 254 3 performing perform VBG cord-277909-rn1dow26 254 4 real real JJ cord-277909-rn1dow26 254 5 time time NN cord-277909-rn1dow26 254 6 PCR pcr NN cord-277909-rn1dow26 254 7 assays assay NNS cord-277909-rn1dow26 254 8 can can MD cord-277909-rn1dow26 254 9 perform perform VB cord-277909-rn1dow26 254 10 quantitative quantitative JJ cord-277909-rn1dow26 254 11 assays assay NNS cord-277909-rn1dow26 254 12 with with IN cord-277909-rn1dow26 254 13 the the DT cord-277909-rn1dow26 254 14 addition addition NN cord-277909-rn1dow26 254 15 of of IN cord-277909-rn1dow26 254 16 suitable suitable JJ cord-277909-rn1dow26 254 17 standard standard JJ cord-277909-rn1dow26 254 18 quantitative quantitative JJ cord-277909-rn1dow26 254 19 controls control NNS cord-277909-rn1dow26 254 20 to to IN cord-277909-rn1dow26 254 21 the the DT cord-277909-rn1dow26 254 22 assay assay NN cord-277909-rn1dow26 254 23 , , , cord-277909-rn1dow26 254 24 although although IN cord-277909-rn1dow26 254 25 a a DT cord-277909-rn1dow26 254 26 uniform uniform JJ cord-277909-rn1dow26 254 27 sample sample NN cord-277909-rn1dow26 254 28 type type NN cord-277909-rn1dow26 254 29 is be VBZ cord-277909-rn1dow26 254 30 required require VBN cord-277909-rn1dow26 254 31 to to TO cord-277909-rn1dow26 254 32 obtain obtain VB cord-277909-rn1dow26 254 33 meaningful meaningful JJ cord-277909-rn1dow26 254 34 results result NNS cord-277909-rn1dow26 254 35 ( ( -LRB- cord-277909-rn1dow26 254 36 e.g. e.g. RB cord-277909-rn1dow26 254 37 , , , cord-277909-rn1dow26 254 38 blood blood NN cord-277909-rn1dow26 254 39 , , , cord-277909-rn1dow26 254 40 urine urine NN cord-277909-rn1dow26 254 41 ) ) -RRB- cord-277909-rn1dow26 254 42 . . . cord-277909-rn1dow26 255 1 Attempting attempt VBG cord-277909-rn1dow26 255 2 to to TO cord-277909-rn1dow26 255 3 quantify quantify VB cord-277909-rn1dow26 255 4 virus virus NN cord-277909-rn1dow26 255 5 in in IN cord-277909-rn1dow26 255 6 nonuniform nonuniform JJ cord-277909-rn1dow26 255 7 sample sample NN cord-277909-rn1dow26 255 8 types type NNS cord-277909-rn1dow26 255 9 ( ( -LRB- cord-277909-rn1dow26 255 10 such such JJ cord-277909-rn1dow26 255 11 as as IN cord-277909-rn1dow26 255 12 respiratory respiratory JJ cord-277909-rn1dow26 255 13 samples sample NNS cord-277909-rn1dow26 255 14 or or CC cord-277909-rn1dow26 255 15 stool stool NN cord-277909-rn1dow26 255 16 ) ) -RRB- cord-277909-rn1dow26 255 17 is be VBZ cord-277909-rn1dow26 255 18 not not RB cord-277909-rn1dow26 255 19 recommended recommend VBN cord-277909-rn1dow26 255 20 without without IN cord-277909-rn1dow26 255 21 thorough thorough JJ cord-277909-rn1dow26 255 22 assessment assessment NN cord-277909-rn1dow26 255 23 of of IN cord-277909-rn1dow26 255 24 sampling sampling NN cord-277909-rn1dow26 255 25 reproducibility reproducibility NN cord-277909-rn1dow26 255 26 . . . cord-277909-rn1dow26 256 1 In in IN cord-277909-rn1dow26 256 2 common common JJ cord-277909-rn1dow26 256 3 with with IN cord-277909-rn1dow26 256 4 many many JJ cord-277909-rn1dow26 256 5 laboratories laboratory NNS cord-277909-rn1dow26 256 6 , , , cord-277909-rn1dow26 256 7 we -PRON- PRP cord-277909-rn1dow26 256 8 prepare prepare VBP cord-277909-rn1dow26 256 9 our -PRON- PRP$ cord-277909-rn1dow26 256 10 quantitative quantitative JJ cord-277909-rn1dow26 256 11 standards standard NNS cord-277909-rn1dow26 256 12 ( ( -LRB- cord-277909-rn1dow26 256 13 oligos oligo NNS cord-277909-rn1dow26 256 14 or or CC cord-277909-rn1dow26 256 15 plasmids plasmid NNS cord-277909-rn1dow26 256 16 ) ) -RRB- cord-277909-rn1dow26 256 17 in in IN cord-277909-rn1dow26 256 18 bulk bulk NN cord-277909-rn1dow26 256 19 , , , cord-277909-rn1dow26 256 20 test test VB cord-277909-rn1dow26 256 21 these these DT cord-277909-rn1dow26 256 22 for for IN cord-277909-rn1dow26 256 23 acceptable acceptable JJ cord-277909-rn1dow26 256 24 linearity linearity NN cord-277909-rn1dow26 256 25 and and CC cord-277909-rn1dow26 256 26 slope slope NN cord-277909-rn1dow26 256 27 ( ( -LRB- cord-277909-rn1dow26 256 28 −3.33 −3.33 NNP cord-277909-rn1dow26 256 29 ) ) -RRB- cord-277909-rn1dow26 256 30 for for IN cord-277909-rn1dow26 256 31 a a DT cord-277909-rn1dow26 256 32 good good JJ cord-277909-rn1dow26 256 33 10-fold 10-fold CD cord-277909-rn1dow26 256 34 dilution dilution NN cord-277909-rn1dow26 256 35 series series NN cord-277909-rn1dow26 256 36 ( ( -LRB- cord-277909-rn1dow26 256 37 we -PRON- PRP cord-277909-rn1dow26 256 38 allow allow VBP cord-277909-rn1dow26 256 39 a a DT cord-277909-rn1dow26 256 40 range range NN cord-277909-rn1dow26 256 41 of of IN cord-277909-rn1dow26 256 42 3.18 3.18 CD cord-277909-rn1dow26 256 43 - - SYM cord-277909-rn1dow26 256 44 3.45 3.45 CD cord-277909-rn1dow26 256 45 which which WDT cord-277909-rn1dow26 256 46 equates equate VBZ cord-277909-rn1dow26 256 47 to to IN cord-277909-rn1dow26 256 48 a a DT cord-277909-rn1dow26 256 49 variation variation NN cord-277909-rn1dow26 256 50 of of IN cord-277909-rn1dow26 256 51 ±5 ±5 CD cord-277909-rn1dow26 256 52 % % NN cord-277909-rn1dow26 256 53 in in IN cord-277909-rn1dow26 256 54 the the DT cord-277909-rn1dow26 256 55 efficiency efficiency NN cord-277909-rn1dow26 256 56 of of IN cord-277909-rn1dow26 256 57 the the DT cord-277909-rn1dow26 256 58 reaction reaction NN cord-277909-rn1dow26 256 59 ) ) -RRB- cord-277909-rn1dow26 256 60 , , , cord-277909-rn1dow26 256 61 and and CC cord-277909-rn1dow26 256 62 then then RB cord-277909-rn1dow26 256 63 aliquot aliquot VB cord-277909-rn1dow26 256 64 this this DT cord-277909-rn1dow26 256 65 into into IN cord-277909-rn1dow26 256 66 volumes volume NNS cord-277909-rn1dow26 256 67 sufficient sufficient JJ cord-277909-rn1dow26 256 68 to to TO cord-277909-rn1dow26 256 69 last last VB cord-277909-rn1dow26 256 70 1 1 CD cord-277909-rn1dow26 256 71 week week NN cord-277909-rn1dow26 256 72 at at IN cord-277909-rn1dow26 256 73 4 4 CD cord-277909-rn1dow26 256 74 • • NN cord-277909-rn1dow26 257 1 C. C. NNP cord-277909-rn1dow26 257 2 Aliquots Aliquots NNP cord-277909-rn1dow26 257 3 are be VBP cord-277909-rn1dow26 257 4 stored store VBN cord-277909-rn1dow26 257 5 frozen frozen JJ cord-277909-rn1dow26 257 6 at at IN cord-277909-rn1dow26 257 7 −20 −20 NNP cord-277909-rn1dow26 257 8 • • NNP cord-277909-rn1dow26 257 9 C C NNP cord-277909-rn1dow26 257 10 until until IN cord-277909-rn1dow26 257 11 required require VBN cord-277909-rn1dow26 257 12 . . . cord-277909-rn1dow26 258 1 It -PRON- PRP cord-277909-rn1dow26 258 2 is be VBZ cord-277909-rn1dow26 258 3 essential essential JJ cord-277909-rn1dow26 258 4 to to TO cord-277909-rn1dow26 258 5 track track VB cord-277909-rn1dow26 258 6 the the DT cord-277909-rn1dow26 258 7 C c NN cord-277909-rn1dow26 258 8 T T NNP cord-277909-rn1dow26 258 9 values value NNS cord-277909-rn1dow26 258 10 of of IN cord-277909-rn1dow26 258 11 the the DT cord-277909-rn1dow26 258 12 controls control NNS cord-277909-rn1dow26 258 13 to to TO cord-277909-rn1dow26 258 14 check check VB cord-277909-rn1dow26 258 15 that that IN cord-277909-rn1dow26 258 16 the the DT cord-277909-rn1dow26 258 17 assay assay NN cord-277909-rn1dow26 258 18 is be VBZ cord-277909-rn1dow26 258 19 performing perform VBG cord-277909-rn1dow26 258 20 satisfactorily satisfactorily RB cord-277909-rn1dow26 258 21 , , , cord-277909-rn1dow26 258 22 and and CC cord-277909-rn1dow26 258 23 to to TO cord-277909-rn1dow26 258 24 enable enable VB cord-277909-rn1dow26 258 25 a a DT cord-277909-rn1dow26 258 26 smooth smooth JJ cord-277909-rn1dow26 258 27 transition transition NN cord-277909-rn1dow26 258 28 to to IN cord-277909-rn1dow26 258 29 a a DT cord-277909-rn1dow26 258 30 new new JJ cord-277909-rn1dow26 258 31 control control NN cord-277909-rn1dow26 258 32 set set VBN cord-277909-rn1dow26 258 33 when when WRB cord-277909-rn1dow26 258 34 required require VBN cord-277909-rn1dow26 258 35 ( ( -LRB- cord-277909-rn1dow26 258 36 Fig Fig NNP cord-277909-rn1dow26 258 37 . . NNP cord-277909-rn1dow26 258 38 7 7 CD cord-277909-rn1dow26 258 39 ) ) -RRB- cord-277909-rn1dow26 258 40 . . . cord-277909-rn1dow26 259 1 We -PRON- PRP cord-277909-rn1dow26 259 2 record record VBP cord-277909-rn1dow26 259 3 our -PRON- PRP$ cord-277909-rn1dow26 259 4 C c NN cord-277909-rn1dow26 259 5 T t NN cord-277909-rn1dow26 259 6 values value NNS cord-277909-rn1dow26 259 7 in in IN cord-277909-rn1dow26 259 8 the the DT cord-277909-rn1dow26 259 9 form form NN cord-277909-rn1dow26 259 10 of of IN cord-277909-rn1dow26 259 11 a a DT cord-277909-rn1dow26 259 12 Shewart Shewart NNP cord-277909-rn1dow26 259 13 Control Control NNP cord-277909-rn1dow26 259 14 Chart Chart NNP cord-277909-rn1dow26 259 15 ( ( -LRB- cord-277909-rn1dow26 259 16 Davies Davies NNP cord-277909-rn1dow26 259 17 , , , cord-277909-rn1dow26 259 18 2003 2003 CD cord-277909-rn1dow26 259 19 ) ) -RRB- cord-277909-rn1dow26 259 20 . . . cord-277909-rn1dow26 260 1 Newly newly RB cord-277909-rn1dow26 260 2 prepared prepare VBN cord-277909-rn1dow26 260 3 standards standard NNS cord-277909-rn1dow26 260 4 ( ( -LRB- cord-277909-rn1dow26 260 5 produced produce VBN cord-277909-rn1dow26 260 6 annually annually RB cord-277909-rn1dow26 260 7 ) ) -RRB- cord-277909-rn1dow26 260 8 must must MD cord-277909-rn1dow26 260 9 have have VB cord-277909-rn1dow26 260 10 C C NNP cord-277909-rn1dow26 260 11 T t NN cord-277909-rn1dow26 260 12 values value NNS cord-277909-rn1dow26 260 13 falling fall VBG cord-277909-rn1dow26 260 14 within within IN cord-277909-rn1dow26 260 15 two two CD cord-277909-rn1dow26 260 16 standard standard JJ cord-277909-rn1dow26 260 17 deviation deviation NN cord-277909-rn1dow26 260 18 of of IN cord-277909-rn1dow26 260 19 the the DT cord-277909-rn1dow26 260 20 mean mean JJ cord-277909-rn1dow26 260 21 value value NN cord-277909-rn1dow26 260 22 determined determine VBN cord-277909-rn1dow26 260 23 for for IN cord-277909-rn1dow26 260 24 the the DT cord-277909-rn1dow26 260 25 standards standard NNS cord-277909-rn1dow26 260 26 previously previously RB cord-277909-rn1dow26 260 27 in in IN cord-277909-rn1dow26 260 28 use use NN cord-277909-rn1dow26 260 29 . . . cord-277909-rn1dow26 261 1 A a DT cord-277909-rn1dow26 261 2 second second JJ cord-277909-rn1dow26 261 3 issue issue NN cord-277909-rn1dow26 261 4 with with IN cord-277909-rn1dow26 261 5 quantitative quantitative JJ cord-277909-rn1dow26 261 6 assays assay NNS cord-277909-rn1dow26 261 7 that that WDT cord-277909-rn1dow26 261 8 do do VBP cord-277909-rn1dow26 261 9 not not RB cord-277909-rn1dow26 261 10 use use VB cord-277909-rn1dow26 261 11 extracted extract VBN cord-277909-rn1dow26 261 12 material material NN cord-277909-rn1dow26 261 13 as as IN cord-277909-rn1dow26 261 14 quantitative quantitative JJ cord-277909-rn1dow26 261 15 controls control NNS cord-277909-rn1dow26 261 16 is be VBZ cord-277909-rn1dow26 261 17 that that IN cord-277909-rn1dow26 261 18 these these DT cord-277909-rn1dow26 261 19 assays assay NNS cord-277909-rn1dow26 261 20 are be VBP cord-277909-rn1dow26 261 21 sensitive sensitive JJ cord-277909-rn1dow26 261 22 to to IN cord-277909-rn1dow26 261 23 changes change NNS cord-277909-rn1dow26 261 24 in in IN cord-277909-rn1dow26 261 25 extraction extraction NN cord-277909-rn1dow26 261 26 methodology methodology NN cord-277909-rn1dow26 261 27 or or CC cord-277909-rn1dow26 261 28 efficiency efficiency NN cord-277909-rn1dow26 261 29 . . . cord-277909-rn1dow26 262 1 We -PRON- PRP cord-277909-rn1dow26 262 2 have have VBP cord-277909-rn1dow26 262 3 recently recently RB cord-277909-rn1dow26 262 4 moved move VBN cord-277909-rn1dow26 262 5 to to IN cord-277909-rn1dow26 262 6 a a DT cord-277909-rn1dow26 262 7 more more RBR cord-277909-rn1dow26 262 8 efficient efficient JJ cord-277909-rn1dow26 262 9 extraction extraction NN cord-277909-rn1dow26 262 10 kit kit NN cord-277909-rn1dow26 262 11 ( ( -LRB- cord-277909-rn1dow26 262 12 QIAamp QIAamp NNP cord-277909-rn1dow26 262 13 Virus Virus NNP cord-277909-rn1dow26 262 14 Robot Robot NNP cord-277909-rn1dow26 262 15 kit kit NN cord-277909-rn1dow26 262 16 ) ) -RRB- cord-277909-rn1dow26 262 17 , , , cord-277909-rn1dow26 262 18 but but CC cord-277909-rn1dow26 262 19 as as IN cord-277909-rn1dow26 262 20 our -PRON- PRP$ cord-277909-rn1dow26 262 21 standards standard NNS cord-277909-rn1dow26 262 22 are be VBP cord-277909-rn1dow26 262 23 plasmid plasmid JJ cord-277909-rn1dow26 262 24 or or CC cord-277909-rn1dow26 262 25 cellular cellular JJ cord-277909-rn1dow26 262 26 DNA dna NN cord-277909-rn1dow26 262 27 based base VBN cord-277909-rn1dow26 262 28 and and CC cord-277909-rn1dow26 262 29 are be VBP cord-277909-rn1dow26 262 30 not not RB cord-277909-rn1dow26 262 31 extracted extract VBN cord-277909-rn1dow26 262 32 alongside alongside IN cord-277909-rn1dow26 262 33 the the DT cord-277909-rn1dow26 262 34 specimens specimen NNS cord-277909-rn1dow26 262 35 , , , cord-277909-rn1dow26 262 36 we -PRON- PRP cord-277909-rn1dow26 262 37 are be VBP cord-277909-rn1dow26 262 38 now now RB cord-277909-rn1dow26 262 39 reporting report VBG cord-277909-rn1dow26 262 40 higher high JJR cord-277909-rn1dow26 262 41 viral viral JJ cord-277909-rn1dow26 262 42 loads load NNS cord-277909-rn1dow26 262 43 for for IN cord-277909-rn1dow26 262 44 the the DT cord-277909-rn1dow26 262 45 same same JJ cord-277909-rn1dow26 262 46 sample sample NN cord-277909-rn1dow26 262 47 than than IN cord-277909-rn1dow26 262 48 with with IN cord-277909-rn1dow26 262 49 previous previous JJ cord-277909-rn1dow26 262 50 extraction extraction NN cord-277909-rn1dow26 262 51 procedures procedure NNS cord-277909-rn1dow26 262 52 . . . cord-277909-rn1dow26 263 1 This this DT cord-277909-rn1dow26 263 2 observed observed JJ cord-277909-rn1dow26 263 3 change change NN cord-277909-rn1dow26 263 4 in in IN cord-277909-rn1dow26 263 5 viral viral JJ cord-277909-rn1dow26 263 6 loads load NNS cord-277909-rn1dow26 263 7 is be VBZ cord-277909-rn1dow26 263 8 only only RB cord-277909-rn1dow26 263 9 a a DT cord-277909-rn1dow26 263 10 problem problem NN cord-277909-rn1dow26 263 11 during during IN cord-277909-rn1dow26 263 12 the the DT cord-277909-rn1dow26 263 13 crossover crossover NN cord-277909-rn1dow26 263 14 period period NN cord-277909-rn1dow26 263 15 from from IN cord-277909-rn1dow26 263 16 one one CD cord-277909-rn1dow26 263 17 extraction extraction NN cord-277909-rn1dow26 263 18 procedure procedure NN cord-277909-rn1dow26 263 19 to to IN cord-277909-rn1dow26 263 20 another another DT cord-277909-rn1dow26 263 21 , , , cord-277909-rn1dow26 263 22 as as IN cord-277909-rn1dow26 263 23 subsequent subsequent JJ cord-277909-rn1dow26 263 24 samples sample NNS cord-277909-rn1dow26 263 25 will will MD cord-277909-rn1dow26 263 26 be be VB cord-277909-rn1dow26 263 27 analysed analyse VBN cord-277909-rn1dow26 263 28 in in IN cord-277909-rn1dow26 263 29 the the DT cord-277909-rn1dow26 263 30 light light NN cord-277909-rn1dow26 263 31 of of IN cord-277909-rn1dow26 263 32 the the DT cord-277909-rn1dow26 263 33 new new JJ cord-277909-rn1dow26 263 34 baseline baseline JJ cord-277909-rn1dow26 263 35 level level NN cord-277909-rn1dow26 263 36 . . . cord-277909-rn1dow26 264 1 To to TO cord-277909-rn1dow26 264 2 ensure ensure VB cord-277909-rn1dow26 264 3 intra intra JJ cord-277909-rn1dow26 264 4 - - JJ cord-277909-rn1dow26 264 5 run run JJ cord-277909-rn1dow26 264 6 extraction extraction NN cord-277909-rn1dow26 264 7 consistency consistency NN cord-277909-rn1dow26 264 8 , , , cord-277909-rn1dow26 264 9 a a DT cord-277909-rn1dow26 264 10 positive positive JJ cord-277909-rn1dow26 264 11 or or CC cord-277909-rn1dow26 264 12 an an DT cord-277909-rn1dow26 264 13 internal internal JJ cord-277909-rn1dow26 264 14 control control NN cord-277909-rn1dow26 264 15 ( ( -LRB- cord-277909-rn1dow26 264 16 of of IN cord-277909-rn1dow26 264 17 known know VBN cord-277909-rn1dow26 264 18 quantity quantity NN cord-277909-rn1dow26 264 19 ) ) -RRB- cord-277909-rn1dow26 264 20 should should MD cord-277909-rn1dow26 264 21 be be VB cord-277909-rn1dow26 264 22 extracted extract VBN cord-277909-rn1dow26 264 23 and and CC cord-277909-rn1dow26 264 24 run run VBN cord-277909-rn1dow26 264 25 at at IN cord-277909-rn1dow26 264 26 the the DT cord-277909-rn1dow26 264 27 same same JJ cord-277909-rn1dow26 264 28 time time NN cord-277909-rn1dow26 264 29 as as IN cord-277909-rn1dow26 264 30 the the DT cord-277909-rn1dow26 264 31 samples sample NNS cord-277909-rn1dow26 264 32 to to TO cord-277909-rn1dow26 264 33 be be VB cord-277909-rn1dow26 264 34 tested test VBN cord-277909-rn1dow26 264 35 . . . cord-277909-rn1dow26 265 1 This this DT cord-277909-rn1dow26 265 2 control control NN cord-277909-rn1dow26 265 3 should should MD cord-277909-rn1dow26 265 4 be be VB cord-277909-rn1dow26 265 5 monitored monitor VBN cord-277909-rn1dow26 265 6 in in IN cord-277909-rn1dow26 265 7 the the DT cord-277909-rn1dow26 265 8 same same JJ cord-277909-rn1dow26 265 9 way way NN cord-277909-rn1dow26 265 10 as as IN cord-277909-rn1dow26 265 11 outlined outline VBN cord-277909-rn1dow26 265 12 above above RB cord-277909-rn1dow26 265 13 ( ( -LRB- cord-277909-rn1dow26 265 14 see see VB cord-277909-rn1dow26 265 15 routine routine JJ cord-277909-rn1dow26 265 16 validation validation NN cord-277909-rn1dow26 265 17 of of IN cord-277909-rn1dow26 265 18 each each DT cord-277909-rn1dow26 265 19 real real JJ cord-277909-rn1dow26 265 20 time time NN cord-277909-rn1dow26 265 21 PCR PCR NNP cord-277909-rn1dow26 265 22 run run NN cord-277909-rn1dow26 265 23 ) ) -RRB- cord-277909-rn1dow26 265 24 . . . cord-277909-rn1dow26 266 1 Once once RB cord-277909-rn1dow26 266 2 an an DT cord-277909-rn1dow26 266 3 assay assay NN cord-277909-rn1dow26 266 4 ( ( -LRB- cord-277909-rn1dow26 266 5 or or CC cord-277909-rn1dow26 266 6 a a DT cord-277909-rn1dow26 266 7 number number NN cord-277909-rn1dow26 266 8 of of IN cord-277909-rn1dow26 266 9 assays assay NNS cord-277909-rn1dow26 266 10 ) ) -RRB- cord-277909-rn1dow26 266 11 has have VBZ cord-277909-rn1dow26 266 12 been be VBN cord-277909-rn1dow26 266 13 introduced introduce VBN cord-277909-rn1dow26 266 14 into into IN cord-277909-rn1dow26 266 15 routine routine JJ cord-277909-rn1dow26 266 16 service service NN cord-277909-rn1dow26 266 17 it -PRON- PRP cord-277909-rn1dow26 266 18 is be VBZ cord-277909-rn1dow26 266 19 important important JJ cord-277909-rn1dow26 267 1 to to TO cord-277909-rn1dow26 267 2 re re VB cord-277909-rn1dow26 267 3 - - VB cord-277909-rn1dow26 267 4 assess assess VB cord-277909-rn1dow26 267 5 the the DT cord-277909-rn1dow26 267 6 sensitivity sensitivity NN cord-277909-rn1dow26 267 7 of of IN cord-277909-rn1dow26 267 8 the the DT cord-277909-rn1dow26 267 9 assay assay NN cord-277909-rn1dow26 267 10 in in IN cord-277909-rn1dow26 267 11 relation relation NN cord-277909-rn1dow26 267 12 to to IN cord-277909-rn1dow26 267 13 current current JJ cord-277909-rn1dow26 267 14 circulating circulate VBG cord-277909-rn1dow26 267 15 viruses virus NNS cord-277909-rn1dow26 267 16 . . . cord-277909-rn1dow26 268 1 This this DT cord-277909-rn1dow26 268 2 can can MD cord-277909-rn1dow26 268 3 Fig Fig NNP cord-277909-rn1dow26 268 4 . . NNP cord-277909-rn1dow26 268 5 7 7 CD cord-277909-rn1dow26 268 6 . . . cord-277909-rn1dow26 269 1 Application application NN cord-277909-rn1dow26 269 2 of of IN cord-277909-rn1dow26 269 3 Shewart Shewart NNP cord-277909-rn1dow26 269 4 Control Control NNP cord-277909-rn1dow26 269 5 Chart Chart NNP cord-277909-rn1dow26 269 6 to to TO cord-277909-rn1dow26 269 7 track track VB cord-277909-rn1dow26 269 8 potential potential JJ cord-277909-rn1dow26 269 9 changes change NNS cord-277909-rn1dow26 269 10 in in IN cord-277909-rn1dow26 269 11 assay assay NN cord-277909-rn1dow26 269 12 performance performance NN cord-277909-rn1dow26 269 13 . . . cord-277909-rn1dow26 270 1 The the DT cord-277909-rn1dow26 270 2 mean mean JJ cord-277909-rn1dow26 270 3 CT CT NNP cord-277909-rn1dow26 270 4 values value NNS cord-277909-rn1dow26 270 5 obtained obtain VBN cord-277909-rn1dow26 270 6 for for IN cord-277909-rn1dow26 270 7 the the DT cord-277909-rn1dow26 270 8 1 1 CD cord-277909-rn1dow26 270 9 × × NNP cord-277909-rn1dow26 270 10 10 10 CD cord-277909-rn1dow26 270 11 7 7 CD cord-277909-rn1dow26 270 12 copies copy NNS cord-277909-rn1dow26 270 13 per per IN cord-277909-rn1dow26 270 14 ml ml NN cord-277909-rn1dow26 270 15 standard standard NN cord-277909-rn1dow26 270 16 were be VBD cord-277909-rn1dow26 270 17 plotted plot VBN cord-277909-rn1dow26 270 18 over over IN cord-277909-rn1dow26 270 19 time time NN cord-277909-rn1dow26 270 20 . . . cord-277909-rn1dow26 271 1 The the DT cord-277909-rn1dow26 271 2 average average JJ cord-277909-rn1dow26 271 3 value value NN cord-277909-rn1dow26 271 4 of of IN cord-277909-rn1dow26 271 5 these these DT cord-277909-rn1dow26 271 6 CT CT NNP cord-277909-rn1dow26 271 7 values value NNS cord-277909-rn1dow26 271 8 was be VBD cord-277909-rn1dow26 271 9 calculated calculate VBN cord-277909-rn1dow26 271 10 and and CC cord-277909-rn1dow26 271 11 plotted plot VBN cord-277909-rn1dow26 271 12 ( ( -LRB- cord-277909-rn1dow26 271 13 red red JJ cord-277909-rn1dow26 271 14 line line NN cord-277909-rn1dow26 271 15 ) ) -RRB- cord-277909-rn1dow26 271 16 for for IN cord-277909-rn1dow26 271 17 each each DT cord-277909-rn1dow26 271 18 data data NN cord-277909-rn1dow26 271 19 set set VBN cord-277909-rn1dow26 271 20 ( ( -LRB- cord-277909-rn1dow26 271 21 along along IN cord-277909-rn1dow26 271 22 with with IN cord-277909-rn1dow26 271 23 two two CD cord-277909-rn1dow26 271 24 standard standard JJ cord-277909-rn1dow26 271 25 deviations deviation NNS cord-277909-rn1dow26 271 26 above above IN cord-277909-rn1dow26 271 27 ( ( -LRB- cord-277909-rn1dow26 271 28 pink pink JJ cord-277909-rn1dow26 271 29 line line NN cord-277909-rn1dow26 271 30 ) ) -RRB- cord-277909-rn1dow26 271 31 and and CC cord-277909-rn1dow26 271 32 below below IN cord-277909-rn1dow26 271 33 ( ( -LRB- cord-277909-rn1dow26 271 34 blue blue JJ cord-277909-rn1dow26 271 35 line line NN cord-277909-rn1dow26 271 36 ) ) -RRB- cord-277909-rn1dow26 271 37 the the DT cord-277909-rn1dow26 271 38 average average JJ cord-277909-rn1dow26 271 39 value value NN cord-277909-rn1dow26 271 40 ) ) -RRB- cord-277909-rn1dow26 271 41 . . . cord-277909-rn1dow26 272 1 Two two CD cord-277909-rn1dow26 272 2 standard standard JJ cord-277909-rn1dow26 272 3 deviations deviation NNS cord-277909-rn1dow26 272 4 are be VBP cord-277909-rn1dow26 272 5 generally generally RB cord-277909-rn1dow26 272 6 accepted accept VBN cord-277909-rn1dow26 272 7 as as IN cord-277909-rn1dow26 272 8 the the DT cord-277909-rn1dow26 272 9 warning warning NN cord-277909-rn1dow26 272 10 level level NN cord-277909-rn1dow26 272 11 in in IN cord-277909-rn1dow26 272 12 such such JJ cord-277909-rn1dow26 272 13 analyses analysis NNS cord-277909-rn1dow26 272 14 . . . cord-277909-rn1dow26 273 1 The the DT cord-277909-rn1dow26 273 2 first first JJ cord-277909-rn1dow26 273 3 ' ' `` cord-277909-rn1dow26 273 4 jump jump NN cord-277909-rn1dow26 273 5 ' ' '' cord-277909-rn1dow26 273 6 ( ( -LRB- cord-277909-rn1dow26 273 7 A a NN cord-277909-rn1dow26 273 8 ) ) -RRB- cord-277909-rn1dow26 273 9 represents represent VBZ cord-277909-rn1dow26 273 10 a a DT cord-277909-rn1dow26 273 11 change change NN cord-277909-rn1dow26 273 12 in in IN cord-277909-rn1dow26 273 13 the the DT cord-277909-rn1dow26 273 14 set set NN cord-277909-rn1dow26 273 15 of of IN cord-277909-rn1dow26 273 16 standards standard NNS cord-277909-rn1dow26 273 17 used use VBN cord-277909-rn1dow26 273 18 , , , cord-277909-rn1dow26 273 19 and and CC cord-277909-rn1dow26 273 20 while while IN cord-277909-rn1dow26 273 21 this this DT cord-277909-rn1dow26 273 22 is be VBZ cord-277909-rn1dow26 273 23 not not RB cord-277909-rn1dow26 273 24 ideal ideal JJ cord-277909-rn1dow26 273 25 , , , cord-277909-rn1dow26 273 26 results result VBZ cord-277909-rn1dow26 273 27 in in IN cord-277909-rn1dow26 273 28 a a DT cord-277909-rn1dow26 273 29 much much RB cord-277909-rn1dow26 273 30 more more RBR cord-277909-rn1dow26 273 31 reproducible reproducible JJ cord-277909-rn1dow26 273 32 assay assay NN cord-277909-rn1dow26 273 33 . . . cord-277909-rn1dow26 274 1 The the DT cord-277909-rn1dow26 274 2 second second JJ cord-277909-rn1dow26 274 3 jump jump NN cord-277909-rn1dow26 274 4 ( ( -LRB- cord-277909-rn1dow26 274 5 B b NN cord-277909-rn1dow26 274 6 ) ) -RRB- cord-277909-rn1dow26 274 7 is be VBZ cord-277909-rn1dow26 274 8 caused cause VBN cord-277909-rn1dow26 274 9 by by IN cord-277909-rn1dow26 274 10 a a DT cord-277909-rn1dow26 274 11 change change NN cord-277909-rn1dow26 274 12 in in IN cord-277909-rn1dow26 274 13 the the DT cord-277909-rn1dow26 274 14 primer primer NN cord-277909-rn1dow26 274 15 - - HYPH cord-277909-rn1dow26 274 16 probe probe JJ cord-277909-rn1dow26 274 17 pool pool NN cord-277909-rn1dow26 274 18 in in IN cord-277909-rn1dow26 274 19 use use NN cord-277909-rn1dow26 274 20 , , , cord-277909-rn1dow26 274 21 and and CC cord-277909-rn1dow26 274 22 shows show VBZ cord-277909-rn1dow26 274 23 a a DT cord-277909-rn1dow26 274 24 significant significant JJ cord-277909-rn1dow26 274 25 change change NN cord-277909-rn1dow26 274 26 in in IN cord-277909-rn1dow26 274 27 the the DT cord-277909-rn1dow26 274 28 sensitivity sensitivity NN cord-277909-rn1dow26 274 29 of of IN cord-277909-rn1dow26 274 30 the the DT cord-277909-rn1dow26 274 31 assay assay NN cord-277909-rn1dow26 274 32 . . . cord-277909-rn1dow26 275 1 As as IN cord-277909-rn1dow26 275 2 a a DT cord-277909-rn1dow26 275 3 result result NN cord-277909-rn1dow26 275 4 of of IN cord-277909-rn1dow26 275 5 this this DT cord-277909-rn1dow26 275 6 analysis analysis NN cord-277909-rn1dow26 275 7 another another DT cord-277909-rn1dow26 275 8 batch batch NN cord-277909-rn1dow26 275 9 of of IN cord-277909-rn1dow26 275 10 primer primer NN cord-277909-rn1dow26 275 11 - - HYPH cord-277909-rn1dow26 275 12 probe probe NN cord-277909-rn1dow26 275 13 pool pool NN cord-277909-rn1dow26 275 14 was be VBD cord-277909-rn1dow26 275 15 prepared prepare VBN cord-277909-rn1dow26 275 16 and and CC cord-277909-rn1dow26 275 17 the the DT cord-277909-rn1dow26 275 18 results result NNS cord-277909-rn1dow26 275 19 obtained obtain VBN cord-277909-rn1dow26 275 20 returned return VBN cord-277909-rn1dow26 275 21 to to IN cord-277909-rn1dow26 275 22 the the DT cord-277909-rn1dow26 275 23 acceptable acceptable JJ cord-277909-rn1dow26 275 24 range range NN cord-277909-rn1dow26 275 25 . . . cord-277909-rn1dow26 276 1 For for IN cord-277909-rn1dow26 276 2 interpretation interpretation NN cord-277909-rn1dow26 276 3 of of IN cord-277909-rn1dow26 276 4 the the DT cord-277909-rn1dow26 276 5 references reference NNS cord-277909-rn1dow26 276 6 to to TO cord-277909-rn1dow26 276 7 colour colour VB cord-277909-rn1dow26 276 8 in in IN cord-277909-rn1dow26 276 9 this this DT cord-277909-rn1dow26 276 10 figure figure NN cord-277909-rn1dow26 276 11 legend legend NN cord-277909-rn1dow26 276 12 , , , cord-277909-rn1dow26 276 13 the the DT cord-277909-rn1dow26 276 14 reader reader NN cord-277909-rn1dow26 276 15 is be VBZ cord-277909-rn1dow26 276 16 referred refer VBN cord-277909-rn1dow26 276 17 to to IN cord-277909-rn1dow26 276 18 the the DT cord-277909-rn1dow26 276 19 web web NN cord-277909-rn1dow26 276 20 version version NN cord-277909-rn1dow26 276 21 of of IN cord-277909-rn1dow26 276 22 the the DT cord-277909-rn1dow26 276 23 article article NN cord-277909-rn1dow26 276 24 . . . cord-277909-rn1dow26 277 1 be be VB cord-277909-rn1dow26 277 2 carried carry VBN cord-277909-rn1dow26 277 3 out out RP cord-277909-rn1dow26 277 4 using use VBG cord-277909-rn1dow26 277 5 positive positive JJ cord-277909-rn1dow26 277 6 samples sample NNS cord-277909-rn1dow26 277 7 detected detect VBN cord-277909-rn1dow26 277 8 by by IN cord-277909-rn1dow26 277 9 an an DT cord-277909-rn1dow26 277 10 alternative alternative JJ cord-277909-rn1dow26 277 11 test test NN cord-277909-rn1dow26 277 12 or or CC cord-277909-rn1dow26 277 13 by by IN cord-277909-rn1dow26 277 14 comparing compare VBG cord-277909-rn1dow26 277 15 primers primer NNS cord-277909-rn1dow26 277 16 and and CC cord-277909-rn1dow26 277 17 probe probe VB cord-277909-rn1dow26 277 18 to to IN cord-277909-rn1dow26 277 19 new new JJ cord-277909-rn1dow26 277 20 sequences sequence NNS cord-277909-rn1dow26 277 21 stored store VBN cord-277909-rn1dow26 277 22 in in IN cord-277909-rn1dow26 277 23 surveillance surveillance NN cord-277909-rn1dow26 277 24 databases database NNS cord-277909-rn1dow26 277 25 . . . cord-277909-rn1dow26 278 1 Although although IN cord-277909-rn1dow26 278 2 most most JJS cord-277909-rn1dow26 278 3 assays assay NNS cord-277909-rn1dow26 278 4 target target VBP cord-277909-rn1dow26 278 5 a a DT cord-277909-rn1dow26 278 6 conserved conserved JJ cord-277909-rn1dow26 278 7 region region NN cord-277909-rn1dow26 278 8 of of IN cord-277909-rn1dow26 278 9 the the DT cord-277909-rn1dow26 278 10 viral viral JJ cord-277909-rn1dow26 278 11 genome genome NN cord-277909-rn1dow26 278 12 , , , cord-277909-rn1dow26 278 13 small small JJ cord-277909-rn1dow26 278 14 changes change NNS cord-277909-rn1dow26 278 15 in in IN cord-277909-rn1dow26 278 16 the the DT cord-277909-rn1dow26 278 17 target target NN cord-277909-rn1dow26 278 18 can can MD cord-277909-rn1dow26 278 19 result result VB cord-277909-rn1dow26 278 20 in in IN cord-277909-rn1dow26 278 21 false false JJ cord-277909-rn1dow26 278 22 negative negative JJ cord-277909-rn1dow26 278 23 reactions reaction NNS cord-277909-rn1dow26 278 24 due due JJ cord-277909-rn1dow26 278 25 to to TO cord-277909-rn1dow26 278 26 primer primer VB cord-277909-rn1dow26 278 27 and/or and/or CC cord-277909-rn1dow26 278 28 probe probe NN cord-277909-rn1dow26 278 29 mismatches mismatch NNS cord-277909-rn1dow26 278 30 . . . cord-277909-rn1dow26 279 1 If if IN cord-277909-rn1dow26 279 2 a a DT cord-277909-rn1dow26 279 3 loss loss NN cord-277909-rn1dow26 279 4 in in IN cord-277909-rn1dow26 279 5 sensitivity sensitivity NN cord-277909-rn1dow26 279 6 occurs occur VBZ cord-277909-rn1dow26 279 7 primer primer NN cord-277909-rn1dow26 279 8 or or CC cord-277909-rn1dow26 279 9 probe probe NN cord-277909-rn1dow26 279 10 sequences sequence NNS cord-277909-rn1dow26 279 11 may may MD cord-277909-rn1dow26 279 12 need need VB cord-277909-rn1dow26 279 13 to to TO cord-277909-rn1dow26 279 14 be be VB cord-277909-rn1dow26 279 15 updated update VBN cord-277909-rn1dow26 279 16 or or CC cord-277909-rn1dow26 279 17 a a DT cord-277909-rn1dow26 279 18 new new JJ cord-277909-rn1dow26 279 19 assay assay NN cord-277909-rn1dow26 279 20 may may MD cord-277909-rn1dow26 279 21 have have VB cord-277909-rn1dow26 279 22 to to TO cord-277909-rn1dow26 279 23 be be VB cord-277909-rn1dow26 279 24 developed develop VBN cord-277909-rn1dow26 279 25 . . . cord-277909-rn1dow26 280 1 Interpreting interpret VBG cord-277909-rn1dow26 280 2 real real JJ cord-277909-rn1dow26 280 3 time time NN cord-277909-rn1dow26 280 4 PCR PCR NNP cord-277909-rn1dow26 280 5 results result NNS cord-277909-rn1dow26 280 6 is be VBZ cord-277909-rn1dow26 280 7 a a DT cord-277909-rn1dow26 280 8 relatively relatively RB cord-277909-rn1dow26 280 9 straightforward straightforward JJ cord-277909-rn1dow26 280 10 process process NN cord-277909-rn1dow26 280 11 . . . cord-277909-rn1dow26 281 1 In in IN cord-277909-rn1dow26 281 2 a a DT cord-277909-rn1dow26 281 3 fully fully RB cord-277909-rn1dow26 281 4 optimised optimise VBN cord-277909-rn1dow26 281 5 assay assay NN cord-277909-rn1dow26 281 6 all all DT cord-277909-rn1dow26 281 7 positive positive JJ cord-277909-rn1dow26 281 8 results result NNS cord-277909-rn1dow26 281 9 should should MD cord-277909-rn1dow26 281 10 show show VB cord-277909-rn1dow26 281 11 increases increase NNS cord-277909-rn1dow26 281 12 in in IN cord-277909-rn1dow26 281 13 fluorescence fluorescence NN cord-277909-rn1dow26 281 14 in in IN cord-277909-rn1dow26 281 15 a a DT cord-277909-rn1dow26 281 16 characteristic characteristic JJ cord-277909-rn1dow26 281 17 exponential exponential JJ cord-277909-rn1dow26 281 18 curve curve NN cord-277909-rn1dow26 281 19 . . . cord-277909-rn1dow26 282 1 However however RB cord-277909-rn1dow26 282 2 there there EX cord-277909-rn1dow26 282 3 are be VBP cord-277909-rn1dow26 282 4 still still RB cord-277909-rn1dow26 282 5 pitfalls pitfall NNS cord-277909-rn1dow26 282 6 that that WDT cord-277909-rn1dow26 282 7 we -PRON- PRP cord-277909-rn1dow26 282 8 feel feel VBP cord-277909-rn1dow26 282 9 users user NNS cord-277909-rn1dow26 282 10 should should MD cord-277909-rn1dow26 282 11 be be VB cord-277909-rn1dow26 282 12 made make VBN cord-277909-rn1dow26 282 13 aware aware JJ cord-277909-rn1dow26 282 14 of of IN cord-277909-rn1dow26 282 15 when when WRB cord-277909-rn1dow26 282 16 interpreting interpret VBG cord-277909-rn1dow26 282 17 data datum NNS cord-277909-rn1dow26 282 18 . . . cord-277909-rn1dow26 283 1 Occasionally occasionally RB cord-277909-rn1dow26 283 2 samples sample NNS cord-277909-rn1dow26 283 3 may may MD cord-277909-rn1dow26 283 4 show show VB cord-277909-rn1dow26 283 5 " " `` cord-277909-rn1dow26 283 6 signal signal NN cord-277909-rn1dow26 283 7 drift drift NN cord-277909-rn1dow26 283 8 " " '' cord-277909-rn1dow26 283 9 ( ( -LRB- cord-277909-rn1dow26 283 10 traces trace NNS cord-277909-rn1dow26 283 11 that that WDT cord-277909-rn1dow26 283 12 increase increase VBP cord-277909-rn1dow26 283 13 in in IN cord-277909-rn1dow26 283 14 fluorescence fluorescence NN cord-277909-rn1dow26 283 15 as as IN cord-277909-rn1dow26 283 16 the the DT cord-277909-rn1dow26 283 17 PCR PCR NNP cord-277909-rn1dow26 283 18 progresses progress VBZ cord-277909-rn1dow26 283 19 but but CC cord-277909-rn1dow26 283 20 are be VBP cord-277909-rn1dow26 283 21 not not RB cord-277909-rn1dow26 283 22 exponential exponential JJ cord-277909-rn1dow26 283 23 ) ) -RRB- cord-277909-rn1dow26 283 24 ( ( -LRB- cord-277909-rn1dow26 283 25 Fig Fig NNP cord-277909-rn1dow26 283 26 . . . cord-277909-rn1dow26 283 27 8) 8) NNP cord-277909-rn1dow26 283 28 . . . cord-277909-rn1dow26 284 1 Signal signal NN cord-277909-rn1dow26 284 2 drift drift NN cord-277909-rn1dow26 284 3 can can MD cord-277909-rn1dow26 284 4 be be VB cord-277909-rn1dow26 284 5 produced produce VBN cord-277909-rn1dow26 284 6 for for IN cord-277909-rn1dow26 284 7 a a DT cord-277909-rn1dow26 284 8 number number NN cord-277909-rn1dow26 284 9 of of IN cord-277909-rn1dow26 284 10 reasons reason NNS cord-277909-rn1dow26 284 11 . . . cord-277909-rn1dow26 285 1 True true JJ cord-277909-rn1dow26 285 2 positive positive JJ cord-277909-rn1dow26 285 3 samples sample NNS cord-277909-rn1dow26 285 4 may may MD cord-277909-rn1dow26 285 5 show show VB cord-277909-rn1dow26 285 6 signal signal NN cord-277909-rn1dow26 285 7 drift drift NN cord-277909-rn1dow26 285 8 because because IN cord-277909-rn1dow26 285 9 of of IN cord-277909-rn1dow26 285 10 sub sub NN cord-277909-rn1dow26 285 11 optimal optimal JJ cord-277909-rn1dow26 285 12 PCR PCR NNP cord-277909-rn1dow26 285 13 conditions condition NNS cord-277909-rn1dow26 285 14 , , , cord-277909-rn1dow26 285 15 inhibition inhibition NN cord-277909-rn1dow26 285 16 and and CC cord-277909-rn1dow26 285 17 primer primer NN cord-277909-rn1dow26 285 18 mismatches mismatch NNS cord-277909-rn1dow26 285 19 . . . cord-277909-rn1dow26 286 1 Occasionally occasionally RB cord-277909-rn1dow26 286 2 negative negative JJ cord-277909-rn1dow26 286 3 samples sample NNS cord-277909-rn1dow26 286 4 may may MD cord-277909-rn1dow26 286 5 also also RB cord-277909-rn1dow26 286 6 show show VB cord-277909-rn1dow26 286 7 signal signal NN cord-277909-rn1dow26 286 8 drift drift NN cord-277909-rn1dow26 286 9 . . . cord-277909-rn1dow26 287 1 This this DT cord-277909-rn1dow26 287 2 may may MD cord-277909-rn1dow26 287 3 be be VB cord-277909-rn1dow26 287 4 due due JJ cord-277909-rn1dow26 287 5 to to TO cord-277909-rn1dow26 287 6 probe probe VB cord-277909-rn1dow26 287 7 breakdown breakdown NN cord-277909-rn1dow26 287 8 resulting result VBG cord-277909-rn1dow26 287 9 in in IN cord-277909-rn1dow26 287 10 a a DT cord-277909-rn1dow26 287 11 fluorescence fluorescence NN cord-277909-rn1dow26 287 12 increase increase NN cord-277909-rn1dow26 287 13 . . . cord-277909-rn1dow26 288 1 Signal signal NN cord-277909-rn1dow26 288 2 drift drift NN cord-277909-rn1dow26 288 3 often often RB cord-277909-rn1dow26 288 4 occurs occur VBZ cord-277909-rn1dow26 288 5 towards towards IN cord-277909-rn1dow26 288 6 the the DT cord-277909-rn1dow26 288 7 end end NN cord-277909-rn1dow26 288 8 of of IN cord-277909-rn1dow26 288 9 the the DT cord-277909-rn1dow26 288 10 PCR PCR NNP cord-277909-rn1dow26 288 11 reaction reaction NN cord-277909-rn1dow26 288 12 . . . cord-277909-rn1dow26 289 1 Some some DT cord-277909-rn1dow26 289 2 platforms platform NNS cord-277909-rn1dow26 289 3 allow allow VBP cord-277909-rn1dow26 289 4 multicomponent multicomponent JJ cord-277909-rn1dow26 289 5 analysis analysis NN cord-277909-rn1dow26 289 6 of of IN cord-277909-rn1dow26 289 7 weak weak JJ cord-277909-rn1dow26 289 8 positive positive JJ cord-277909-rn1dow26 289 9 traces trace NNS cord-277909-rn1dow26 289 10 . . . cord-277909-rn1dow26 290 1 This this DT cord-277909-rn1dow26 290 2 allows allow VBZ cord-277909-rn1dow26 290 3 users user NNS cord-277909-rn1dow26 290 4 to to TO cord-277909-rn1dow26 290 5 assess assess VB cord-277909-rn1dow26 290 6 the the DT cord-277909-rn1dow26 290 7 changes change NNS cord-277909-rn1dow26 290 8 of of IN cord-277909-rn1dow26 290 9 each each DT cord-277909-rn1dow26 290 10 fluorescent fluorescent JJ cord-277909-rn1dow26 290 11 label label NN cord-277909-rn1dow26 290 12 in in IN cord-277909-rn1dow26 290 13 the the DT cord-277909-rn1dow26 290 14 reaction reaction NN cord-277909-rn1dow26 290 15 . . . cord-277909-rn1dow26 291 1 Genuine genuine JJ cord-277909-rn1dow26 291 2 positive positive JJ cord-277909-rn1dow26 291 3 traces trace NNS cord-277909-rn1dow26 291 4 will will MD cord-277909-rn1dow26 291 5 show show VB cord-277909-rn1dow26 291 6 an an DT cord-277909-rn1dow26 291 7 exponential exponential JJ cord-277909-rn1dow26 291 8 increase increase NN cord-277909-rn1dow26 291 9 in in IN cord-277909-rn1dow26 291 10 the the DT cord-277909-rn1dow26 291 11 fluorescent fluorescent JJ cord-277909-rn1dow26 291 12 signal signal NN cord-277909-rn1dow26 291 13 whereas whereas IN cord-277909-rn1dow26 291 14 signal signal NN cord-277909-rn1dow26 291 15 drift drift NN cord-277909-rn1dow26 291 16 is be VBZ cord-277909-rn1dow26 291 17 often often RB cord-277909-rn1dow26 291 18 due due JJ cord-277909-rn1dow26 291 19 to to IN cord-277909-rn1dow26 291 20 a a DT cord-277909-rn1dow26 291 21 change change NN cord-277909-rn1dow26 291 22 in in IN cord-277909-rn1dow26 291 23 the the DT cord-277909-rn1dow26 291 24 normalisation normalisation NN cord-277909-rn1dow26 291 25 dye dye NN cord-277909-rn1dow26 291 26 ( ( -LRB- cord-277909-rn1dow26 291 27 e.g. e.g. RB cord-277909-rn1dow26 291 28 , , , cord-277909-rn1dow26 291 29 ROX ROX NNP cord-277909-rn1dow26 291 30 ) ) -RRB- cord-277909-rn1dow26 291 31 . . . cord-277909-rn1dow26 292 1 We -PRON- PRP cord-277909-rn1dow26 292 2 currently currently RB cord-277909-rn1dow26 292 3 repeat repeat VBP cord-277909-rn1dow26 292 4 all all DT cord-277909-rn1dow26 292 5 positive positive JJ cord-277909-rn1dow26 292 6 samples sample NNS cord-277909-rn1dow26 292 7 with with IN cord-277909-rn1dow26 292 8 Ct Ct NNP cord-277909-rn1dow26 292 9 's 's POS cord-277909-rn1dow26 292 10 greater great JJR cord-277909-rn1dow26 292 11 than than IN cord-277909-rn1dow26 292 12 35 35 CD cord-277909-rn1dow26 292 13 cycles cycle NNS cord-277909-rn1dow26 292 14 as as IN cord-277909-rn1dow26 292 15 we -PRON- PRP cord-277909-rn1dow26 292 16 feel feel VBP cord-277909-rn1dow26 292 17 these these DT cord-277909-rn1dow26 292 18 may may MD cord-277909-rn1dow26 292 19 be be VB cord-277909-rn1dow26 292 20 either either CC cord-277909-rn1dow26 292 21 low low JJ cord-277909-rn1dow26 292 22 copy copy NN cord-277909-rn1dow26 292 23 number number NN cord-277909-rn1dow26 292 24 positive positive JJ cord-277909-rn1dow26 292 25 samples sample NNS cord-277909-rn1dow26 292 26 or or CC cord-277909-rn1dow26 292 27 non non JJ cord-277909-rn1dow26 292 28 - - JJ cord-277909-rn1dow26 292 29 specific specific JJ cord-277909-rn1dow26 292 30 reactions reaction NNS cord-277909-rn1dow26 292 31 . . . cord-277909-rn1dow26 293 1 Some some DT cord-277909-rn1dow26 293 2 96 96 CD cord-277909-rn1dow26 293 3 well well UH cord-277909-rn1dow26 293 4 real real JJ cord-277909-rn1dow26 293 5 time time NN cord-277909-rn1dow26 293 6 plates plate NNS cord-277909-rn1dow26 293 7 require require VBP cord-277909-rn1dow26 293 8 sealing seal VBG cord-277909-rn1dow26 293 9 with with IN cord-277909-rn1dow26 293 10 optically optically RB cord-277909-rn1dow26 293 11 clear clear JJ cord-277909-rn1dow26 293 12 plate plate NN cord-277909-rn1dow26 293 13 seals seal NNS cord-277909-rn1dow26 293 14 before before IN cord-277909-rn1dow26 293 15 PCR PCR NNP cord-277909-rn1dow26 293 16 can can MD cord-277909-rn1dow26 293 17 take take VB cord-277909-rn1dow26 293 18 place place NN cord-277909-rn1dow26 293 19 . . . cord-277909-rn1dow26 294 1 On on IN cord-277909-rn1dow26 294 2 occasion occasion NN cord-277909-rn1dow26 294 3 these these DT cord-277909-rn1dow26 294 4 may may MD cord-277909-rn1dow26 294 5 not not RB cord-277909-rn1dow26 294 6 seal seal VB cord-277909-rn1dow26 294 7 properly properly RB cord-277909-rn1dow26 294 8 and and CC cord-277909-rn1dow26 294 9 PCR PCR NNP cord-277909-rn1dow26 294 10 reagents reagent NNS cord-277909-rn1dow26 294 11 evaporate evaporate VBP cord-277909-rn1dow26 294 12 during during IN cord-277909-rn1dow26 294 13 cycling cycling NN cord-277909-rn1dow26 294 14 . . . cord-277909-rn1dow26 295 1 As as IN cord-277909-rn1dow26 295 2 a a DT cord-277909-rn1dow26 295 3 result result NN cord-277909-rn1dow26 295 4 of of IN cord-277909-rn1dow26 295 5 this this DT cord-277909-rn1dow26 295 6 a a DT cord-277909-rn1dow26 295 7 curve curve NN cord-277909-rn1dow26 295 8 may may MD cord-277909-rn1dow26 295 9 be be VB cord-277909-rn1dow26 295 10 produced produce VBN cord-277909-rn1dow26 295 11 mimicking mimic VBG cord-277909-rn1dow26 295 12 a a DT cord-277909-rn1dow26 295 13 positive positive JJ cord-277909-rn1dow26 295 14 PCR PCR NNP cord-277909-rn1dow26 295 15 reaction reaction NN cord-277909-rn1dow26 295 16 . . . cord-277909-rn1dow26 296 1 The the DT cord-277909-rn1dow26 296 2 correct correct JJ cord-277909-rn1dow26 296 3 placing placing NN cord-277909-rn1dow26 296 4 of of IN cord-277909-rn1dow26 296 5 the the DT cord-277909-rn1dow26 296 6 threshold threshold NN cord-277909-rn1dow26 296 7 line line NN cord-277909-rn1dow26 296 8 is be VBZ cord-277909-rn1dow26 296 9 essential essential JJ cord-277909-rn1dow26 296 10 to to TO cord-277909-rn1dow26 296 11 allow allow VB cord-277909-rn1dow26 296 12 accurate accurate JJ cord-277909-rn1dow26 296 13 C c NN cord-277909-rn1dow26 296 14 T t NN cord-277909-rn1dow26 296 15 measurement measurement NN cord-277909-rn1dow26 296 16 . . . cord-277909-rn1dow26 297 1 Some some DT cord-277909-rn1dow26 297 2 of of IN cord-277909-rn1dow26 297 3 the the DT cord-277909-rn1dow26 297 4 computer computer NN cord-277909-rn1dow26 297 5 software software NN cord-277909-rn1dow26 297 6 available available JJ cord-277909-rn1dow26 297 7 with with IN cord-277909-rn1dow26 297 8 current current JJ cord-277909-rn1dow26 297 9 real real JJ cord-277909-rn1dow26 297 10 time time NN cord-277909-rn1dow26 297 11 PCR pcr NN cord-277909-rn1dow26 297 12 formats format NNS cord-277909-rn1dow26 297 13 can can MD cord-277909-rn1dow26 297 14 automatically automatically RB cord-277909-rn1dow26 297 15 place place VB cord-277909-rn1dow26 297 16 the the DT cord-277909-rn1dow26 297 17 threshold threshold NN cord-277909-rn1dow26 297 18 line line NN cord-277909-rn1dow26 297 19 during during IN cord-277909-rn1dow26 297 20 result result NN cord-277909-rn1dow26 297 21 analysis analysis NN cord-277909-rn1dow26 297 22 . . . cord-277909-rn1dow26 298 1 Any any DT cord-277909-rn1dow26 298 2 sample sample NN cord-277909-rn1dow26 298 3 with with IN cord-277909-rn1dow26 298 4 fluorescence fluorescence NN cord-277909-rn1dow26 298 5 above above IN cord-277909-rn1dow26 298 6 this this DT cord-277909-rn1dow26 298 7 line line NN cord-277909-rn1dow26 298 8 will will MD cord-277909-rn1dow26 298 9 be be VB cord-277909-rn1dow26 298 10 regarded regard VBN cord-277909-rn1dow26 298 11 as as IN cord-277909-rn1dow26 298 12 positive positive JJ cord-277909-rn1dow26 298 13 by by IN cord-277909-rn1dow26 298 14 the the DT cord-277909-rn1dow26 298 15 computer computer NN cord-277909-rn1dow26 298 16 . . . cord-277909-rn1dow26 299 1 Always always RB cord-277909-rn1dow26 299 2 check check VB cord-277909-rn1dow26 299 3 the the DT cord-277909-rn1dow26 299 4 automatic automatic JJ cord-277909-rn1dow26 299 5 placement placement NN cord-277909-rn1dow26 299 6 of of IN cord-277909-rn1dow26 299 7 the the DT cord-277909-rn1dow26 299 8 threshold threshold NN cord-277909-rn1dow26 299 9 line line NN cord-277909-rn1dow26 299 10 as as IN cord-277909-rn1dow26 299 11 we -PRON- PRP cord-277909-rn1dow26 299 12 have have VBP cord-277909-rn1dow26 299 13 found find VBN cord-277909-rn1dow26 299 14 that that IN cord-277909-rn1dow26 299 15 sometimes sometimes RB cord-277909-rn1dow26 299 16 the the DT cord-277909-rn1dow26 299 17 computer computer NN cord-277909-rn1dow26 299 18 will will MD cord-277909-rn1dow26 299 19 place place VB cord-277909-rn1dow26 299 20 it -PRON- PRP cord-277909-rn1dow26 299 21 wrongly wrongly RB cord-277909-rn1dow26 299 22 resulting result VBG cord-277909-rn1dow26 299 23 in in IN cord-277909-rn1dow26 299 24 both both DT cord-277909-rn1dow26 299 25 false false JJ cord-277909-rn1dow26 299 26 positive positive JJ cord-277909-rn1dow26 299 27 and and CC cord-277909-rn1dow26 299 28 negative negative JJ cord-277909-rn1dow26 299 29 results result NNS cord-277909-rn1dow26 299 30 ( ( -LRB- cord-277909-rn1dow26 299 31 Fig fig NN cord-277909-rn1dow26 299 32 . . . cord-277909-rn1dow26 299 33 9 9 CD cord-277909-rn1dow26 299 34 ) ) -RRB- cord-277909-rn1dow26 299 35 . . . cord-277909-rn1dow26 300 1 An an DT cord-277909-rn1dow26 300 2 alternative alternative NN cord-277909-rn1dow26 300 3 is be VBZ cord-277909-rn1dow26 300 4 to to TO cord-277909-rn1dow26 300 5 use use VB cord-277909-rn1dow26 300 6 a a DT cord-277909-rn1dow26 300 7 fixed fix VBN cord-277909-rn1dow26 300 8 threshold threshold NN cord-277909-rn1dow26 300 9 line line NN cord-277909-rn1dow26 300 10 . . . cord-277909-rn1dow26 301 1 The the DT cord-277909-rn1dow26 301 2 use use NN cord-277909-rn1dow26 301 3 of of IN cord-277909-rn1dow26 301 4 such such PDT cord-277909-rn1dow26 301 5 a a DT cord-277909-rn1dow26 301 6 system system NN cord-277909-rn1dow26 301 7 will will MD cord-277909-rn1dow26 301 8 ensure ensure VB cord-277909-rn1dow26 301 9 the the DT cord-277909-rn1dow26 301 10 real real JJ cord-277909-rn1dow26 301 11 time time NN cord-277909-rn1dow26 301 12 assay assay NN cord-277909-rn1dow26 301 13 is be VBZ cord-277909-rn1dow26 301 14 directly directly RB cord-277909-rn1dow26 301 15 comparable comparable JJ cord-277909-rn1dow26 301 16 to to IN cord-277909-rn1dow26 301 17 previous previous JJ cord-277909-rn1dow26 301 18 runs run NNS cord-277909-rn1dow26 302 1 This this DT cord-277909-rn1dow26 302 2 should should MD cord-277909-rn1dow26 302 3 not not RB cord-277909-rn1dow26 302 4 preclude preclude VB cord-277909-rn1dow26 302 5 careful careful JJ cord-277909-rn1dow26 302 6 analysis analysis NN cord-277909-rn1dow26 302 7 of of IN cord-277909-rn1dow26 302 8 the the DT cord-277909-rn1dow26 302 9 data datum NNS cord-277909-rn1dow26 302 10 . . . cord-277909-rn1dow26 303 1 The the DT cord-277909-rn1dow26 303 2 increased increase VBN cord-277909-rn1dow26 303 3 sensitivity sensitivity NN cord-277909-rn1dow26 303 4 of of IN cord-277909-rn1dow26 303 5 real real JJ cord-277909-rn1dow26 303 6 time time NN cord-277909-rn1dow26 303 7 PCR PCR NNP cord-277909-rn1dow26 303 8 means mean VBZ cord-277909-rn1dow26 303 9 that that IN cord-277909-rn1dow26 303 10 , , , cord-277909-rn1dow26 303 11 like like IN cord-277909-rn1dow26 303 12 nested nest VBN cord-277909-rn1dow26 303 13 PCR PCR NNP cord-277909-rn1dow26 303 14 , , , cord-277909-rn1dow26 303 15 occasionally occasionally RB cord-277909-rn1dow26 303 16 positive positive JJ cord-277909-rn1dow26 303 17 results result NNS cord-277909-rn1dow26 303 18 will will MD cord-277909-rn1dow26 303 19 be be VB cord-277909-rn1dow26 303 20 obtained obtain VBN cord-277909-rn1dow26 303 21 that that IN cord-277909-rn1dow26 303 22 Fig Fig NNP cord-277909-rn1dow26 303 23 . . . cord-277909-rn1dow26 304 1 8 8 CD cord-277909-rn1dow26 304 2 . . . cord-277909-rn1dow26 305 1 Example example NN cord-277909-rn1dow26 305 2 of of IN cord-277909-rn1dow26 305 3 negative negative JJ cord-277909-rn1dow26 305 4 samples sample NNS cord-277909-rn1dow26 305 5 showing show VBG cord-277909-rn1dow26 305 6 signal signal NN cord-277909-rn1dow26 305 7 drift drift NN cord-277909-rn1dow26 305 8 . . . cord-277909-rn1dow26 306 1 The the DT cord-277909-rn1dow26 306 2 two two CD cord-277909-rn1dow26 306 3 sample sample NN cord-277909-rn1dow26 306 4 shown show VBN cord-277909-rn1dow26 306 5 in in IN cord-277909-rn1dow26 306 6 blue blue JJ cord-277909-rn1dow26 306 7 are be VBP cord-277909-rn1dow26 306 8 showing show VBG cord-277909-rn1dow26 306 9 an an DT cord-277909-rn1dow26 306 10 increases increase NNS cord-277909-rn1dow26 306 11 in in IN cord-277909-rn1dow26 306 12 flourescence flourescence NN cord-277909-rn1dow26 306 13 when when WRB cord-277909-rn1dow26 306 14 examined examine VBN cord-277909-rn1dow26 306 15 using use VBG cord-277909-rn1dow26 306 16 the the DT cord-277909-rn1dow26 306 17 quantification quantification NN cord-277909-rn1dow26 306 18 option option NN cord-277909-rn1dow26 306 19 ( ( -LRB- cord-277909-rn1dow26 306 20 shown show VBN cord-277909-rn1dow26 306 21 above above IN cord-277909-rn1dow26 306 22 left left RB cord-277909-rn1dow26 306 23 ) ) -RRB- cord-277909-rn1dow26 306 24 . . . cord-277909-rn1dow26 307 1 Analysis analysis NN cord-277909-rn1dow26 307 2 of of IN cord-277909-rn1dow26 307 3 the the DT cord-277909-rn1dow26 307 4 raw raw JJ cord-277909-rn1dow26 307 5 cycling cycling NN cord-277909-rn1dow26 307 6 data datum NNS cord-277909-rn1dow26 307 7 ( ( -LRB- cord-277909-rn1dow26 307 8 shown show VBN cord-277909-rn1dow26 307 9 above above IN cord-277909-rn1dow26 307 10 right right NN cord-277909-rn1dow26 307 11 ) ) -RRB- cord-277909-rn1dow26 307 12 shows show VBZ cord-277909-rn1dow26 307 13 that that IN cord-277909-rn1dow26 307 14 there there EX cord-277909-rn1dow26 307 15 is be VBZ cord-277909-rn1dow26 307 16 no no DT cord-277909-rn1dow26 307 17 increase increase NN cord-277909-rn1dow26 307 18 in in IN cord-277909-rn1dow26 307 19 flourescence flourescence NN cord-277909-rn1dow26 307 20 usually usually RB cord-277909-rn1dow26 307 21 associated associate VBN cord-277909-rn1dow26 307 22 with with IN cord-277909-rn1dow26 307 23 a a DT cord-277909-rn1dow26 307 24 positive positive JJ cord-277909-rn1dow26 307 25 sample sample NN cord-277909-rn1dow26 307 26 . . . cord-277909-rn1dow26 308 1 are be VBP cord-277909-rn1dow26 308 2 not not RB cord-277909-rn1dow26 308 3 in in IN cord-277909-rn1dow26 308 4 keeping keep VBG cord-277909-rn1dow26 308 5 with with IN cord-277909-rn1dow26 308 6 accepted accepted JJ cord-277909-rn1dow26 308 7 knowledge knowledge NN cord-277909-rn1dow26 308 8 . . . cord-277909-rn1dow26 309 1 For for IN cord-277909-rn1dow26 309 2 example example NN cord-277909-rn1dow26 309 3 , , , cord-277909-rn1dow26 309 4 herpes herpes NN cord-277909-rn1dow26 309 5 viruses virus NNS cord-277909-rn1dow26 309 6 in in IN cord-277909-rn1dow26 309 7 throat throat NN cord-277909-rn1dow26 309 8 swabs swab NNS cord-277909-rn1dow26 309 9 should should MD cord-277909-rn1dow26 309 10 be be VB cord-277909-rn1dow26 309 11 interpreted interpret VBN cord-277909-rn1dow26 309 12 with with IN cord-277909-rn1dow26 309 13 care care NN cord-277909-rn1dow26 309 14 . . . cord-277909-rn1dow26 310 1 We -PRON- PRP cord-277909-rn1dow26 310 2 often often RB cord-277909-rn1dow26 310 3 detect detect VBP cord-277909-rn1dow26 310 4 low low JJ cord-277909-rn1dow26 310 5 positive positive JJ cord-277909-rn1dow26 310 6 EBV EBV NNP cord-277909-rn1dow26 310 7 , , , cord-277909-rn1dow26 310 8 HHV-6 HHV-6 NNP cord-277909-rn1dow26 310 9 , , , cord-277909-rn1dow26 310 10 HSV HSV NNP cord-277909-rn1dow26 310 11 or or CC cord-277909-rn1dow26 310 12 CMV CMV NNP cord-277909-rn1dow26 310 13 in in IN cord-277909-rn1dow26 310 14 throat throat NN cord-277909-rn1dow26 310 15 swabs swab NNS cord-277909-rn1dow26 310 16 in in IN cord-277909-rn1dow26 310 17 cases case NNS cord-277909-rn1dow26 310 18 of of IN cord-277909-rn1dow26 310 19 respiratory respiratory JJ cord-277909-rn1dow26 310 20 infection infection NN cord-277909-rn1dow26 310 21 . . . cord-277909-rn1dow26 311 1 Whether whether IN cord-277909-rn1dow26 311 2 these these DT cord-277909-rn1dow26 311 3 are be VBP cord-277909-rn1dow26 311 4 the the DT cord-277909-rn1dow26 311 5 cause cause NN cord-277909-rn1dow26 311 6 of of IN cord-277909-rn1dow26 311 7 disease disease NN cord-277909-rn1dow26 311 8 or or CC cord-277909-rn1dow26 311 9 unrelated unrelated JJ cord-277909-rn1dow26 311 10 re re NNS cord-277909-rn1dow26 311 11 - - NNS cord-277909-rn1dow26 311 12 activations activation NNS cord-277909-rn1dow26 311 13 are be VBP cord-277909-rn1dow26 311 14 unclear unclear JJ cord-277909-rn1dow26 311 15 . . . cord-277909-rn1dow26 312 1 Although although IN cord-277909-rn1dow26 312 2 these these DT cord-277909-rn1dow26 312 3 findings finding NNS cord-277909-rn1dow26 312 4 may may MD cord-277909-rn1dow26 312 5 be be VB cord-277909-rn1dow26 312 6 irrelevant irrelevant JJ cord-277909-rn1dow26 312 7 to to IN cord-277909-rn1dow26 312 8 the the DT cord-277909-rn1dow26 312 9 clinical clinical JJ cord-277909-rn1dow26 312 10 illness illness NN cord-277909-rn1dow26 312 11 it -PRON- PRP cord-277909-rn1dow26 312 12 is be VBZ cord-277909-rn1dow26 312 13 important important JJ cord-277909-rn1dow26 312 14 that that IN cord-277909-rn1dow26 312 15 these these DT cord-277909-rn1dow26 312 16 results result NNS cord-277909-rn1dow26 312 17 are be VBP cord-277909-rn1dow26 312 18 not not RB cord-277909-rn1dow26 312 19 ignored ignore VBN cord-277909-rn1dow26 312 20 . . . cord-277909-rn1dow26 313 1 For for IN cord-277909-rn1dow26 313 2 as as IN cord-277909-rn1dow26 313 3 we -PRON- PRP cord-277909-rn1dow26 313 4 gain gain VBP cord-277909-rn1dow26 313 5 more more JJR cord-277909-rn1dow26 313 6 experience experience NN cord-277909-rn1dow26 313 7 with with IN cord-277909-rn1dow26 313 8 these these DT cord-277909-rn1dow26 313 9 sensitive sensitive JJ cord-277909-rn1dow26 313 10 assays assay NNS cord-277909-rn1dow26 313 11 we -PRON- PRP cord-277909-rn1dow26 313 12 may may MD cord-277909-rn1dow26 313 13 identify identify VB cord-277909-rn1dow26 313 14 new new JJ cord-277909-rn1dow26 313 15 , , , cord-277909-rn1dow26 313 16 previously previously RB cord-277909-rn1dow26 313 17 unrecognised unrecognised JJ cord-277909-rn1dow26 313 18 syndromes syndrome NNS cord-277909-rn1dow26 313 19 attributed attribute VBN cord-277909-rn1dow26 313 20 to to IN cord-277909-rn1dow26 313 21 particular particular JJ cord-277909-rn1dow26 313 22 viral viral JJ cord-277909-rn1dow26 313 23 pathogens pathogen NNS cord-277909-rn1dow26 313 24 . . . cord-277909-rn1dow26 314 1 There there EX cord-277909-rn1dow26 314 2 is be VBZ cord-277909-rn1dow26 314 3 no no DT cord-277909-rn1dow26 314 4 doubt doubt NN cord-277909-rn1dow26 314 5 that that IN cord-277909-rn1dow26 314 6 in in IN cord-277909-rn1dow26 314 7 the the DT cord-277909-rn1dow26 314 8 coming come VBG cord-277909-rn1dow26 314 9 years year NNS cord-277909-rn1dow26 314 10 an an DT cord-277909-rn1dow26 314 11 increasing increase VBG cord-277909-rn1dow26 314 12 number number NN cord-277909-rn1dow26 314 13 of of IN cord-277909-rn1dow26 314 14 virology virology NN cord-277909-rn1dow26 314 15 laboratories laboratory NNS cord-277909-rn1dow26 314 16 will will MD cord-277909-rn1dow26 314 17 utilise utilise VB cord-277909-rn1dow26 314 18 real real JJ cord-277909-rn1dow26 314 19 time time NN cord-277909-rn1dow26 315 1 Fig Fig NNP cord-277909-rn1dow26 315 2 . . . cord-277909-rn1dow26 316 1 10 10 CD cord-277909-rn1dow26 316 2 . . . cord-277909-rn1dow26 317 1 The the DT cord-277909-rn1dow26 317 2 turn turn NN cord-277909-rn1dow26 317 3 around around IN cord-277909-rn1dow26 317 4 time time NN cord-277909-rn1dow26 317 5 of of IN cord-277909-rn1dow26 317 6 respiratory respiratory JJ cord-277909-rn1dow26 317 7 samples sample NNS cord-277909-rn1dow26 317 8 in in IN cord-277909-rn1dow26 317 9 2002 2002 CD cord-277909-rn1dow26 317 10 - - SYM cord-277909-rn1dow26 317 11 2003 2003 CD cord-277909-rn1dow26 317 12 to to IN cord-277909-rn1dow26 317 13 2004 2004 CD cord-277909-rn1dow26 317 14 - - SYM cord-277909-rn1dow26 317 15 2005 2005 CD cord-277909-rn1dow26 317 16 . . . cord-277909-rn1dow26 318 1 PCR PCR NNP cord-277909-rn1dow26 318 2 assays assay NNS cord-277909-rn1dow26 318 3 . . . cord-277909-rn1dow26 319 1 As as IN cord-277909-rn1dow26 319 2 a a DT cord-277909-rn1dow26 319 3 result result NN cord-277909-rn1dow26 319 4 virology virology NN cord-277909-rn1dow26 319 5 laboratories laboratory NNS cord-277909-rn1dow26 319 6 will will MD cord-277909-rn1dow26 319 7 be be VB cord-277909-rn1dow26 319 8 able able JJ cord-277909-rn1dow26 319 9 to to TO cord-277909-rn1dow26 319 10 offer offer VB cord-277909-rn1dow26 319 11 more more JJR cord-277909-rn1dow26 319 12 tests test NNS cord-277909-rn1dow26 319 13 and and CC cord-277909-rn1dow26 319 14 process process VBP cord-277909-rn1dow26 319 15 more more JJR cord-277909-rn1dow26 319 16 samples sample NNS cord-277909-rn1dow26 319 17 while while IN cord-277909-rn1dow26 319 18 reducing reduce VBG cord-277909-rn1dow26 319 19 turn turn NN cord-277909-rn1dow26 319 20 around around IN cord-277909-rn1dow26 319 21 times time NNS cord-277909-rn1dow26 319 22 . . . cord-277909-rn1dow26 320 1 This this DT cord-277909-rn1dow26 320 2 can can MD cord-277909-rn1dow26 320 3 be be VB cord-277909-rn1dow26 320 4 highlighted highlight VBN cord-277909-rn1dow26 320 5 by by IN cord-277909-rn1dow26 320 6 our -PRON- PRP$ cord-277909-rn1dow26 320 7 winter winter NN cord-277909-rn1dow26 320 8 respiratory respiratory JJ cord-277909-rn1dow26 320 9 surveillance surveillance NN cord-277909-rn1dow26 320 10 service service NN cord-277909-rn1dow26 320 11 ( ( -LRB- cord-277909-rn1dow26 320 12 SERVIS SERVIS NNP cord-277909-rn1dow26 320 13 ) ) -RRB- cord-277909-rn1dow26 320 14 , , , cord-277909-rn1dow26 320 15 which which WDT cord-277909-rn1dow26 320 16 currently currently RB cord-277909-rn1dow26 320 17 tests test VBZ cord-277909-rn1dow26 320 18 for for IN cord-277909-rn1dow26 320 19 12 12 CD cord-277909-rn1dow26 320 20 pathogens pathogen NNS cord-277909-rn1dow26 320 21 . . . cord-277909-rn1dow26 321 1 During during IN cord-277909-rn1dow26 321 2 the the DT cord-277909-rn1dow26 321 3 2004 2004 CD cord-277909-rn1dow26 321 4 - - SYM cord-277909-rn1dow26 321 5 2005 2005 CD cord-277909-rn1dow26 321 6 season season NN cord-277909-rn1dow26 321 7 509 509 CD cord-277909-rn1dow26 321 8 samples sample NNS cord-277909-rn1dow26 321 9 were be VBD cord-277909-rn1dow26 321 10 tested test VBN cord-277909-rn1dow26 321 11 with with IN cord-277909-rn1dow26 321 12 80 80 CD cord-277909-rn1dow26 321 13 % % NN cord-277909-rn1dow26 321 14 of of IN cord-277909-rn1dow26 321 15 results result NNS cord-277909-rn1dow26 321 16 reported report VBN cord-277909-rn1dow26 321 17 within within IN cord-277909-rn1dow26 321 18 3 3 CD cord-277909-rn1dow26 321 19 days day NNS cord-277909-rn1dow26 321 20 of of IN cord-277909-rn1dow26 321 21 the the DT cord-277909-rn1dow26 321 22 samples sample NNS cord-277909-rn1dow26 321 23 arriving arrive VBG cord-277909-rn1dow26 321 24 in in IN cord-277909-rn1dow26 321 25 the the DT cord-277909-rn1dow26 321 26 laboratory laboratory NN cord-277909-rn1dow26 321 27 ( ( -LRB- cord-277909-rn1dow26 321 28 Fig Fig NNP cord-277909-rn1dow26 321 29 . . . cord-277909-rn1dow26 321 30 10 10 CD cord-277909-rn1dow26 321 31 ) ) -RRB- cord-277909-rn1dow26 321 32 . . . cord-277909-rn1dow26 322 1 For for IN cord-277909-rn1dow26 322 2 2002 2002 CD cord-277909-rn1dow26 322 3 - - SYM cord-277909-rn1dow26 322 4 2003 2003 CD cord-277909-rn1dow26 322 5 when when WRB cord-277909-rn1dow26 322 6 gel gel NN cord-277909-rn1dow26 322 7 based base VBN cord-277909-rn1dow26 322 8 PCR PCR NNP cord-277909-rn1dow26 322 9 was be VBD cord-277909-rn1dow26 322 10 used use VBN cord-277909-rn1dow26 322 11 to to TO cord-277909-rn1dow26 322 12 detect detect VB cord-277909-rn1dow26 322 13 Influenza Influenza NNP cord-277909-rn1dow26 322 14 A A NNP cord-277909-rn1dow26 322 15 and and CC cord-277909-rn1dow26 322 16 B b NN cord-277909-rn1dow26 322 17 , , , cord-277909-rn1dow26 322 18 RSV RSV NNP cord-277909-rn1dow26 322 19 and and CC cord-277909-rn1dow26 322 20 picornavirus picornavirus NNP cord-277909-rn1dow26 322 21 , , , cord-277909-rn1dow26 322 22 554 554 CD cord-277909-rn1dow26 322 23 samples sample NNS cord-277909-rn1dow26 322 24 were be VBD cord-277909-rn1dow26 322 25 tested test VBN cord-277909-rn1dow26 322 26 in in IN cord-277909-rn1dow26 322 27 total total NN cord-277909-rn1dow26 322 28 . . . cord-277909-rn1dow26 323 1 Only only RB cord-277909-rn1dow26 323 2 3.6 3.6 CD cord-277909-rn1dow26 323 3 % % NN cord-277909-rn1dow26 323 4 of of IN cord-277909-rn1dow26 323 5 results result NNS cord-277909-rn1dow26 323 6 were be VBD cord-277909-rn1dow26 323 7 available available JJ cord-277909-rn1dow26 323 8 in in IN cord-277909-rn1dow26 323 9 3 3 CD cord-277909-rn1dow26 323 10 days day NNS cord-277909-rn1dow26 323 11 with with IN cord-277909-rn1dow26 323 12 most most JJS cord-277909-rn1dow26 323 13 results result NNS cord-277909-rn1dow26 323 14 returned return VBN cord-277909-rn1dow26 323 15 to to IN cord-277909-rn1dow26 323 16 users user NNS cord-277909-rn1dow26 323 17 within within IN cord-277909-rn1dow26 323 18 14 14 CD cord-277909-rn1dow26 323 19 days day NNS cord-277909-rn1dow26 323 20 . . . cord-277909-rn1dow26 324 1 With with IN cord-277909-rn1dow26 324 2 a a DT cord-277909-rn1dow26 324 3 slightly slightly RB cord-277909-rn1dow26 324 4 extended extended JJ cord-277909-rn1dow26 324 5 working working NN cord-277909-rn1dow26 324 6 day day NN cord-277909-rn1dow26 324 7 , , , cord-277909-rn1dow26 324 8 real real JJ cord-277909-rn1dow26 324 9 time time NN cord-277909-rn1dow26 324 10 PCR PCR NNP cord-277909-rn1dow26 324 11 results result NNS cord-277909-rn1dow26 324 12 ought ought MD cord-277909-rn1dow26 324 13 to to TO cord-277909-rn1dow26 324 14 be be VB cord-277909-rn1dow26 324 15 reported report VBN cord-277909-rn1dow26 324 16 within within IN cord-277909-rn1dow26 324 17 36 36 CD cord-277909-rn1dow26 324 18 h h NN cord-277909-rn1dow26 324 19 of of IN cord-277909-rn1dow26 324 20 receipt receipt NN cord-277909-rn1dow26 324 21 . . . cord-277909-rn1dow26 325 1 The the DT cord-277909-rn1dow26 325 2 routine routine JJ cord-277909-rn1dow26 325 3 use use NN cord-277909-rn1dow26 325 4 of of IN cord-277909-rn1dow26 325 5 real real JJ cord-277909-rn1dow26 325 6 time time NN cord-277909-rn1dow26 325 7 PCR PCR NNP cord-277909-rn1dow26 325 8 will will MD cord-277909-rn1dow26 325 9 have have VB cord-277909-rn1dow26 325 10 several several JJ cord-277909-rn1dow26 325 11 benefits benefit NNS cord-277909-rn1dow26 325 12 . . . cord-277909-rn1dow26 326 1 First first RB cord-277909-rn1dow26 326 2 it -PRON- PRP cord-277909-rn1dow26 326 3 will will MD cord-277909-rn1dow26 326 4 aid aid VB cord-277909-rn1dow26 326 5 patient patient JJ cord-277909-rn1dow26 326 6 management management NN cord-277909-rn1dow26 326 7 ( ( -LRB- cord-277909-rn1dow26 326 8 prognosis prognosis NN cord-277909-rn1dow26 326 9 , , , cord-277909-rn1dow26 326 10 treatment treatment NN cord-277909-rn1dow26 326 11 guidance guidance NN cord-277909-rn1dow26 326 12 and and CC cord-277909-rn1dow26 326 13 infection infection NN cord-277909-rn1dow26 326 14 control control NN cord-277909-rn1dow26 326 15 ) ) -RRB- cord-277909-rn1dow26 326 16 and and CC cord-277909-rn1dow26 326 17 may may MD cord-277909-rn1dow26 326 18 assist assist VB cord-277909-rn1dow26 326 19 in in IN cord-277909-rn1dow26 326 20 the the DT cord-277909-rn1dow26 326 21 development development NN cord-277909-rn1dow26 326 22 of of IN cord-277909-rn1dow26 326 23 new new JJ cord-277909-rn1dow26 326 24 antiviral antiviral JJ cord-277909-rn1dow26 326 25 therapies therapy NNS cord-277909-rn1dow26 326 26 . . . cord-277909-rn1dow26 327 1 Real real JJ cord-277909-rn1dow26 327 2 time time NN cord-277909-rn1dow26 327 3 PCR PCR NNP cord-277909-rn1dow26 327 4 will will MD cord-277909-rn1dow26 327 5 also also RB cord-277909-rn1dow26 327 6 improve improve VB cord-277909-rn1dow26 327 7 the the DT cord-277909-rn1dow26 327 8 sensitivity sensitivity NN cord-277909-rn1dow26 327 9 of of IN cord-277909-rn1dow26 327 10 the the DT cord-277909-rn1dow26 327 11 surveillance surveillance NN cord-277909-rn1dow26 327 12 of of IN cord-277909-rn1dow26 327 13 viral viral JJ cord-277909-rn1dow26 327 14 pathogens pathogen NNS cord-277909-rn1dow26 327 15 , , , cord-277909-rn1dow26 327 16 increasing increase VBG cord-277909-rn1dow26 327 17 our -PRON- PRP$ cord-277909-rn1dow26 327 18 understanding understanding NN cord-277909-rn1dow26 327 19 of of IN cord-277909-rn1dow26 327 20 these these DT cord-277909-rn1dow26 327 21 important important JJ cord-277909-rn1dow26 327 22 infections infection NNS cord-277909-rn1dow26 327 23 , , , cord-277909-rn1dow26 327 24 providing provide VBG cord-277909-rn1dow26 327 25 accurate accurate JJ cord-277909-rn1dow26 327 26 assessments assessment NNS cord-277909-rn1dow26 327 27 of of IN cord-277909-rn1dow26 327 28 the the DT cord-277909-rn1dow26 327 29 morbidity morbidity NN cord-277909-rn1dow26 327 30 and and CC cord-277909-rn1dow26 327 31 economic economic JJ cord-277909-rn1dow26 327 32 cost cost NN cord-277909-rn1dow26 327 33 of of IN cord-277909-rn1dow26 327 34 disease disease NN cord-277909-rn1dow26 327 35 and and CC cord-277909-rn1dow26 327 36 facilitating facilitate VBG cord-277909-rn1dow26 327 37 the the DT cord-277909-rn1dow26 327 38 implementation implementation NN cord-277909-rn1dow26 327 39 of of IN cord-277909-rn1dow26 327 40 public public JJ cord-277909-rn1dow26 327 41 health health NN cord-277909-rn1dow26 327 42 prevention prevention NN cord-277909-rn1dow26 327 43 measures measure NNS cord-277909-rn1dow26 327 44 . . . cord-277909-rn1dow26 328 1 356 356 CD cord-277909-rn1dow26 328 2 2.1 2.1 CD cord-277909-rn1dow26 328 3 . . . cord-277909-rn1dow26 329 1 Which which WDT cord-277909-rn1dow26 329 2 real real JJ cord-277909-rn1dow26 329 3 time time NN cord-277909-rn1dow26 329 4 PCR PCR NNP cord-277909-rn1dow26 329 5 chemistry chemistry NN cord-277909-rn1dow26 329 6 is be VBZ cord-277909-rn1dow26 329 7 best good JJS cord-277909-rn1dow26 329 8 for for IN cord-277909-rn1dow26 329 9 viral viral JJ cord-277909-rn1dow26 329 10 diagnosis diagnosis NN cord-277909-rn1dow26 329 11 ? ? . cord-277909-rn1dow26 330 1 Automated automate VBN cord-277909-rn1dow26 330 2 extraction extraction NN cord-277909-rn1dow26 330 3 and and CC cord-277909-rn1dow26 330 4 liquid liquid NN cord-277909-rn1dow26 330 5 handling handling NN cord-277909-rn1dow26 330 6 equipment equipment NN cord-277909-rn1dow26 331 1 Continual continual JJ cord-277909-rn1dow26 331 2 assessment assessment NN cord-277909-rn1dow26 331 3 of of IN cord-277909-rn1dow26 331 4 the the DT cord-277909-rn1dow26 331 5 sensitivity sensitivity NN cord-277909-rn1dow26 331 6 of of IN cord-277909-rn1dow26 331 7 real real JJ cord-277909-rn1dow26 331 8 time time NN cord-277909-rn1dow26 331 9 PCR PCR NNP cord-277909-rn1dow26 331 10 primers primer NNS cord-277909-rn1dow26 331 11 and and CC cord-277909-rn1dow26 331 12 probe probe VB cord-277909-rn1dow26 331 13 Basic basic JJ cord-277909-rn1dow26 331 14 principles principle NNS cord-277909-rn1dow26 331 15 of of IN cord-277909-rn1dow26 331 16 real real JJ cord-277909-rn1dow26 331 17 time time NN cord-277909-rn1dow26 331 18 quantitative quantitative JJ cord-277909-rn1dow26 331 19 PCR pcr NN cord-277909-rn1dow26 331 20 Preventing prevent VBG cord-277909-rn1dow26 331 21 PCR PCR NNP cord-277909-rn1dow26 331 22 amplification amplification NN cord-277909-rn1dow26 331 23 carryover carryover NN cord-277909-rn1dow26 331 24 contamination contamination NN cord-277909-rn1dow26 331 25 in in IN cord-277909-rn1dow26 331 26 a a DT cord-277909-rn1dow26 331 27 clinical clinical JJ cord-277909-rn1dow26 331 28 laboratory laboratory NN cord-277909-rn1dow26 331 29 Pitfalls pitfall NNS cord-277909-rn1dow26 331 30 of of IN cord-277909-rn1dow26 331 31 quantitative quantitative JJ cord-277909-rn1dow26 331 32 real real JJ cord-277909-rn1dow26 331 33 time time NN cord-277909-rn1dow26 331 34 reverse reverse NN cord-277909-rn1dow26 331 35 - - HYPH cord-277909-rn1dow26 331 36 transcription transcription NN cord-277909-rn1dow26 331 37 polymerase polymerase NN cord-277909-rn1dow26 331 38 chain chain NN cord-277909-rn1dow26 331 39 reaction reaction NN cord-277909-rn1dow26 331 40 A a DT cord-277909-rn1dow26 331 41 coloured coloured JJ cord-277909-rn1dow26 331 42 version version NN cord-277909-rn1dow26 331 43 of of IN cord-277909-rn1dow26 331 44 the the DT cord-277909-rn1dow26 331 45 J J NNP cord-277909-rn1dow26 331 46 chart chart NN cord-277909-rn1dow26 331 47 or or CC cord-277909-rn1dow26 331 48 the the DT cord-277909-rn1dow26 331 49 amc amc NNP cord-277909-rn1dow26 331 50 - - HYPH cord-277909-rn1dow26 331 51 D D NNP cord-277909-rn1dow26 331 52 J J NNP cord-277909-rn1dow26 331 53 - - HYPH cord-277909-rn1dow26 331 54 Chart Chart NNP cord-277909-rn1dow26 331 55 Molecular molecular JJ cord-277909-rn1dow26 331 56 techniques technique NNS cord-277909-rn1dow26 331 57 for for IN cord-277909-rn1dow26 331 58 detection detection NN cord-277909-rn1dow26 331 59 , , , cord-277909-rn1dow26 331 60 identification identification NN cord-277909-rn1dow26 331 61 and and CC cord-277909-rn1dow26 331 62 analysis analysis NN cord-277909-rn1dow26 331 63 of of IN cord-277909-rn1dow26 331 64 human human JJ cord-277909-rn1dow26 331 65 papillomaviruses papillomaviruse NNS cord-277909-rn1dow26 331 66 ( ( -LRB- cord-277909-rn1dow26 331 67 HPVs HPVs NNP cord-277909-rn1dow26 331 68 ) ) -RRB- cord-277909-rn1dow26 332 1 My -PRON- PRP$ cord-277909-rn1dow26 332 2 favourite favourite JJ cord-277909-rn1dow26 332 3 primers primer NNS cord-277909-rn1dow26 332 4 : : : cord-277909-rn1dow26 332 5 real real JJ cord-277909-rn1dow26 332 6 time time NN cord-277909-rn1dow26 332 7 RT rt NN cord-277909-rn1dow26 332 8 - - HYPH cord-277909-rn1dow26 332 9 PCR PCR NNP cord-277909-rn1dow26 332 10 detection detection NN cord-277909-rn1dow26 332 11 of of IN cord-277909-rn1dow26 332 12 12 12 CD cord-277909-rn1dow26 332 13 respiratory respiratory JJ cord-277909-rn1dow26 332 14 viral viral JJ cord-277909-rn1dow26 332 15 infections infection NNS cord-277909-rn1dow26 332 16 in in IN cord-277909-rn1dow26 332 17 four four CD cord-277909-rn1dow26 332 18 triplex triplex NN cord-277909-rn1dow26 332 19 reactions reaction NNS cord-277909-rn1dow26 332 20 Optimisation Optimisation NNP cord-277909-rn1dow26 332 21 of of IN cord-277909-rn1dow26 332 22 PCR PCR NNP cord-277909-rn1dow26 332 23 reactions reaction NNS cord-277909-rn1dow26 332 24 using use VBG cord-277909-rn1dow26 332 25 primer primer NN cord-277909-rn1dow26 332 26 chessboarding chessboarding NNP cord-277909-rn1dow26 332 27 Evaluation Evaluation NNP cord-277909-rn1dow26 332 28 of of IN cord-277909-rn1dow26 332 29 a a DT cord-277909-rn1dow26 332 30 multiplex multiplex JJ cord-277909-rn1dow26 332 31 real real JJ cord-277909-rn1dow26 332 32 time time NN cord-277909-rn1dow26 332 33 reverse reverse NN cord-277909-rn1dow26 332 34 transcriptase transcriptase NN cord-277909-rn1dow26 332 35 PCR pcr NN cord-277909-rn1dow26 332 36 assay assay NN cord-277909-rn1dow26 332 37 for for IN cord-277909-rn1dow26 332 38 detection detection NN cord-277909-rn1dow26 332 39 and and CC cord-277909-rn1dow26 332 40 differentiation differentiation NN cord-277909-rn1dow26 332 41 of of IN cord-277909-rn1dow26 332 42 influenza influenza NN cord-277909-rn1dow26 332 43 viruses virus NNS cord-277909-rn1dow26 332 44 A A NNP cord-277909-rn1dow26 332 45 and and CC cord-277909-rn1dow26 332 46 B b NN cord-277909-rn1dow26 332 47 during during IN cord-277909-rn1dow26 332 48 the the DT cord-277909-rn1dow26 332 49 2001 2001 CD cord-277909-rn1dow26 332 50 - - SYM cord-277909-rn1dow26 332 51 2002 2002 CD cord-277909-rn1dow26 332 52 influenza influenza NN cord-277909-rn1dow26 332 53 season season NN cord-277909-rn1dow26 332 54 in in IN cord-277909-rn1dow26 332 55 Israel Israel NNP cord-277909-rn1dow26 332 56 Allelic Allelic NNP cord-277909-rn1dow26 332 57 discrimination discrimination NN cord-277909-rn1dow26 332 58 by by IN cord-277909-rn1dow26 332 59 nick nick NNP cord-277909-rn1dow26 332 60 - - HYPH cord-277909-rn1dow26 332 61 translation translation NN cord-277909-rn1dow26 332 62 PCR PCR NNP cord-277909-rn1dow26 332 63 with with IN cord-277909-rn1dow26 332 64 fluorogenic fluorogenic JJ cord-277909-rn1dow26 332 65 probes probe NNS cord-277909-rn1dow26 332 66 Real real JJ cord-277909-rn1dow26 332 67 time time NN cord-277909-rn1dow26 332 68 PCR PCR NNP cord-277909-rn1dow26 332 69 in in IN cord-277909-rn1dow26 332 70 the the DT cord-277909-rn1dow26 332 71 microbiology microbiology NN cord-277909-rn1dow26 332 72 laboratory laboratory NN cord-277909-rn1dow26 333 1 Genogroup Genogroup NNP cord-277909-rn1dow26 333 2 I I NNP cord-277909-rn1dow26 333 3 and and CC cord-277909-rn1dow26 333 4 II II NNP cord-277909-rn1dow26 333 5 noroviruses noroviruses NNP cord-277909-rn1dow26 333 6 detected detect VBD cord-277909-rn1dow26 333 7 in in IN cord-277909-rn1dow26 333 8 stool stool NN cord-277909-rn1dow26 333 9 samples sample NNS cord-277909-rn1dow26 333 10 by by IN cord-277909-rn1dow26 333 11 real real JJ cord-277909-rn1dow26 333 12 time time NN cord-277909-rn1dow26 333 13 reverse reverse NN cord-277909-rn1dow26 333 14 transcription transcription NN cord-277909-rn1dow26 333 15 - - HYPH cord-277909-rn1dow26 333 16 PCR pcr NN cord-277909-rn1dow26 333 17 using use VBG cord-277909-rn1dow26 333 18 highly highly RB cord-277909-rn1dow26 333 19 degenerate degenerate JJ cord-277909-rn1dow26 333 20 universal universal JJ cord-277909-rn1dow26 333 21 primers primer NNS cord-277909-rn1dow26 333 22 Diagnostic diagnostic JJ cord-277909-rn1dow26 333 23 value value NN cord-277909-rn1dow26 333 24 of of IN cord-277909-rn1dow26 333 25 real real JJ cord-277909-rn1dow26 333 26 time time NN cord-277909-rn1dow26 333 27 capillary capillary JJ cord-277909-rn1dow26 333 28 thermal thermal JJ cord-277909-rn1dow26 333 29 cycler cycler NN cord-277909-rn1dow26 333 30 in in IN cord-277909-rn1dow26 333 31 virus virus NN cord-277909-rn1dow26 333 32 detection detection NN cord-277909-rn1dow26 333 33 Rapid Rapid NNP cord-277909-rn1dow26 333 34 and and CC cord-277909-rn1dow26 333 35 sensitive sensitive JJ cord-277909-rn1dow26 333 36 method method NN cord-277909-rn1dow26 333 37 using use VBG cord-277909-rn1dow26 333 38 multiplex multiplex JJ cord-277909-rn1dow26 333 39 real real JJ cord-277909-rn1dow26 333 40 time time NN cord-277909-rn1dow26 333 41 PCR PCR NNP cord-277909-rn1dow26 333 42 for for IN cord-277909-rn1dow26 333 43 diagnosis diagnosis NN cord-277909-rn1dow26 333 44 of of IN cord-277909-rn1dow26 333 45 infections infection NNS cord-277909-rn1dow26 333 46 by by IN cord-277909-rn1dow26 333 47 influenza influenza NN cord-277909-rn1dow26 333 48 a a NN cord-277909-rn1dow26 333 49 and and CC cord-277909-rn1dow26 333 50 influenza influenza NN cord-277909-rn1dow26 333 51 B b NN cord-277909-rn1dow26 333 52 viruses virus NNS cord-277909-rn1dow26 333 53 , , , cord-277909-rn1dow26 333 54 respiratory respiratory JJ cord-277909-rn1dow26 333 55 syncytial syncytial JJ cord-277909-rn1dow26 333 56 virus virus NN cord-277909-rn1dow26 333 57 , , , cord-277909-rn1dow26 333 58 and and CC cord-277909-rn1dow26 333 59 parainfluenza parainfluenza NNP cord-277909-rn1dow26 333 60 viruses virus NNS cord-277909-rn1dow26 333 61 1 1 CD cord-277909-rn1dow26 333 62 , , , cord-277909-rn1dow26 333 63 2 2 CD cord-277909-rn1dow26 333 64 , , , cord-277909-rn1dow26 333 65 3 3 CD cord-277909-rn1dow26 333 66 and and CC cord-277909-rn1dow26 333 67 4 4 CD cord-277909-rn1dow26 333 68 Molecular molecular JJ cord-277909-rn1dow26 333 69 beacons beacon NNS cord-277909-rn1dow26 333 70 : : : cord-277909-rn1dow26 334 1 probes probe NNS cord-277909-rn1dow26 334 2 that that WDT cord-277909-rn1dow26 334 3 fluoresce fluoresce VBP cord-277909-rn1dow26 334 4 upon upon IN cord-277909-rn1dow26 334 5 hybridization hybridization NN