id	sid	tid	token	lemma	pos
cord-269353-wgeuh1i2	1	1	key	key	NN
cord-269353-wgeuh1i2	1	2	:	:	:
cord-269353-wgeuh1i2	1	3	cord-269353-wgeuh1i2	cord-269353-wgeuh1i2	NN
cord-269353-wgeuh1i2	1	4	authors	author	NNS
cord-269353-wgeuh1i2	1	5	:	:	:
cord-269353-wgeuh1i2	1	6	Tian	Tian	NNP
cord-269353-wgeuh1i2	1	7	,	,	,
cord-269353-wgeuh1i2	1	8	Lin	Lin	NNP
cord-269353-wgeuh1i2	1	9	;	;	:
cord-269353-wgeuh1i2	1	10	Shen	Shen	NNP
cord-269353-wgeuh1i2	1	11	,	,	,
cord-269353-wgeuh1i2	1	12	Xuejuan	Xuejuan	NNP
cord-269353-wgeuh1i2	1	13	;	;	:
cord-269353-wgeuh1i2	1	14	Murphy	Murphy	NNP
cord-269353-wgeuh1i2	1	15	,	,	,
cord-269353-wgeuh1i2	1	16	Robert	Robert	NNP
cord-269353-wgeuh1i2	1	17	W.	W.	NNP
cord-269353-wgeuh1i2	1	18	;	;	:
cord-269353-wgeuh1i2	1	19	Shen	Shen	NNP
cord-269353-wgeuh1i2	1	20	,	,	,
cord-269353-wgeuh1i2	2	1	Yongyi	Yongyi	NNP
cord-269353-wgeuh1i2	2	2	title	title	NN
cord-269353-wgeuh1i2	2	3	:	:	:
cord-269353-wgeuh1i2	3	1	The	the	DT
cord-269353-wgeuh1i2	3	2	adaptation	adaptation	NN
cord-269353-wgeuh1i2	3	3	of	of	IN
cord-269353-wgeuh1i2	3	4	codon	codon	NN
cord-269353-wgeuh1i2	3	5	usage	usage	NN
cord-269353-wgeuh1i2	3	6	of	of	IN
cord-269353-wgeuh1i2	3	7	+	+	SYM
cord-269353-wgeuh1i2	3	8	ssRNA	ssrna	NN
cord-269353-wgeuh1i2	3	9	viruses	virus	NNS
cord-269353-wgeuh1i2	3	10	to	to	IN
cord-269353-wgeuh1i2	3	11	their	-PRON-	PRP$
cord-269353-wgeuh1i2	3	12	hosts	host	NNS
cord-269353-wgeuh1i2	3	13	date	date	NN
cord-269353-wgeuh1i2	3	14	:	:	:
cord-269353-wgeuh1i2	3	15	2018	2018	CD
cord-269353-wgeuh1i2	3	16	-	-	HYPH
cord-269353-wgeuh1i2	3	17	06	06	CD
cord-269353-wgeuh1i2	3	18	-	-	SYM
cord-269353-wgeuh1i2	3	19	02	02	CD
cord-269353-wgeuh1i2	3	20	journal	journal	NN
cord-269353-wgeuh1i2	3	21	:	:	:
cord-269353-wgeuh1i2	4	1	Infect	infect	VB
cord-269353-wgeuh1i2	4	2	Genet	Genet	NNP
cord-269353-wgeuh1i2	4	3	Evol	Evol	NNP
cord-269353-wgeuh1i2	4	4	DOI	doi	NN
cord-269353-wgeuh1i2	4	5	:	:	:
cord-269353-wgeuh1i2	5	1	10.1016	10.1016	CD
cord-269353-wgeuh1i2	5	2	/	/	NFP
cord-269353-wgeuh1i2	5	3	j.meegid.2018.05.034	j.meegid.2018.05.034	.
cord-269353-wgeuh1i2	6	1	sha	sha	NNP
cord-269353-wgeuh1i2	6	2	:	:	:
cord-269353-wgeuh1i2	7	1	0f11f8b25665d5282ca3be429069f5d434409178	0f11f8b25665d5282ca3be429069f5d434409178	CD
cord-269353-wgeuh1i2	7	2	doc_id	doc_id	CD
cord-269353-wgeuh1i2	7	3	:	:	:
cord-269353-wgeuh1i2	8	1	269353	269353	CD
cord-269353-wgeuh1i2	8	2	cord_uid	cord_uid	NNS
cord-269353-wgeuh1i2	8	3	:	:	:
cord-269353-wgeuh1i2	9	1	wgeuh1i2	wgeuh1i2	NNP
cord-269353-wgeuh1i2	9	2	Viruses	virus	NNS
cord-269353-wgeuh1i2	9	3	depend	depend	VBP
cord-269353-wgeuh1i2	9	4	on	on	IN
cord-269353-wgeuh1i2	9	5	their	-PRON-	PRP$
cord-269353-wgeuh1i2	9	6	host	host	NN
cord-269353-wgeuh1i2	9	7	's	's	POS
cord-269353-wgeuh1i2	9	8	cellular	cellular	JJ
cord-269353-wgeuh1i2	9	9	structure	structure	NN
cord-269353-wgeuh1i2	9	10	to	to	TO
cord-269353-wgeuh1i2	9	11	survive	survive	VB
cord-269353-wgeuh1i2	9	12	.	.	.
cord-269353-wgeuh1i2	10	1	Most	Most	JJS
cord-269353-wgeuh1i2	10	2	of	of	IN
cord-269353-wgeuh1i2	10	3	them	-PRON-	PRP
cord-269353-wgeuh1i2	10	4	do	do	VBP
cord-269353-wgeuh1i2	10	5	not	not	RB
cord-269353-wgeuh1i2	10	6	have	have	VB
cord-269353-wgeuh1i2	10	7	tRNAs	trnas	CD
cord-269353-wgeuh1i2	11	1	,	,	,
cord-269353-wgeuh1i2	11	2	their	-PRON-	PRP$
cord-269353-wgeuh1i2	11	3	translation	translation	NN
cord-269353-wgeuh1i2	11	4	relies	rely	VBZ
cord-269353-wgeuh1i2	11	5	on	on	IN
cord-269353-wgeuh1i2	11	6	hosts	host	NNS
cord-269353-wgeuh1i2	11	7	'	'	POS
cord-269353-wgeuh1i2	11	8	tRNA	trna	NN
cord-269353-wgeuh1i2	11	9	pools	pool	NNS
cord-269353-wgeuh1i2	11	10	.	.	.
cord-269353-wgeuh1i2	12	1	Over	over	IN
cord-269353-wgeuh1i2	12	2	the	the	DT
cord-269353-wgeuh1i2	12	3	course	course	NN
cord-269353-wgeuh1i2	12	4	of	of	IN
cord-269353-wgeuh1i2	12	5	evolution	evolution	NN
cord-269353-wgeuh1i2	12	6	,	,	,
cord-269353-wgeuh1i2	12	7	viruses	virus	NNS
cord-269353-wgeuh1i2	12	8	needed	need	VBN
cord-269353-wgeuh1i2	12	9	to	to	TO
cord-269353-wgeuh1i2	12	10	optimally	optimally	RB
cord-269353-wgeuh1i2	12	11	exploit	exploit	VB
cord-269353-wgeuh1i2	12	12	cellular	cellular	JJ
cord-269353-wgeuh1i2	12	13	processes	process	NNS
cord-269353-wgeuh1i2	12	14	of	of	IN
cord-269353-wgeuh1i2	12	15	their	-PRON-	PRP$
cord-269353-wgeuh1i2	12	16	host	host	NN
cord-269353-wgeuh1i2	12	17	.	.	.
cord-269353-wgeuh1i2	13	1	Thus	thus	RB
cord-269353-wgeuh1i2	13	2	,	,	,
cord-269353-wgeuh1i2	13	3	codon	codon	NN
cord-269353-wgeuh1i2	13	4	usage	usage	NN
cord-269353-wgeuh1i2	13	5	of	of	IN
cord-269353-wgeuh1i2	13	6	a	a	DT
cord-269353-wgeuh1i2	13	7	virus	virus	NN
cord-269353-wgeuh1i2	13	8	should	should	MD
cord-269353-wgeuh1i2	13	9	coevolve	coevolve	VB
cord-269353-wgeuh1i2	13	10	with	with	IN
cord-269353-wgeuh1i2	13	11	its	-PRON-	PRP$
cord-269353-wgeuh1i2	13	12	host	host	NN
cord-269353-wgeuh1i2	13	13	to	to	IN
cord-269353-wgeuh1i2	13	14	efficiently	efficiently	RB
cord-269353-wgeuh1i2	13	15	and	and	CC
cord-269353-wgeuh1i2	13	16	rapidly	rapidly	RB
cord-269353-wgeuh1i2	13	17	replicate	replicate	VB
cord-269353-wgeuh1i2	13	18	.	.	.
cord-269353-wgeuh1i2	14	1	Some	some	DT
cord-269353-wgeuh1i2	14	2	viruses	virus	NNS
cord-269353-wgeuh1i2	14	3	can	can	MD
cord-269353-wgeuh1i2	14	4	invade	invade	VB
cord-269353-wgeuh1i2	14	5	a	a	DT
cord-269353-wgeuh1i2	14	6	broad	broad	JJ
cord-269353-wgeuh1i2	14	7	spectrum	spectrum	NN
cord-269353-wgeuh1i2	14	8	of	of	IN
cord-269353-wgeuh1i2	14	9	hosts	host	NNS
cord-269353-wgeuh1i2	14	10	(	(	-LRB-
cord-269353-wgeuh1i2	14	11	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	14	12	)	)	-RRB-
cord-269353-wgeuh1i2	14	13	,	,	,
cord-269353-wgeuh1i2	14	14	while	while	IN
cord-269353-wgeuh1i2	14	15	others	other	NNS
cord-269353-wgeuh1i2	14	16	can	can	MD
cord-269353-wgeuh1i2	14	17	invade	invade	VB
cord-269353-wgeuh1i2	14	18	a	a	DT
cord-269353-wgeuh1i2	14	19	narrow	narrow	JJ
cord-269353-wgeuh1i2	14	20	spectrum	spectrum	NN
cord-269353-wgeuh1i2	14	21	only	only	RB
cord-269353-wgeuh1i2	14	22	(	(	-LRB-
cord-269353-wgeuh1i2	14	23	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	14	24	)	)	-RRB-
cord-269353-wgeuh1i2	14	25	.	.	.
cord-269353-wgeuh1i2	15	1	Consequently	consequently	RB
cord-269353-wgeuh1i2	15	2	,	,	,
cord-269353-wgeuh1i2	15	3	we	-PRON-	PRP
cord-269353-wgeuh1i2	15	4	test	test	VBP
cord-269353-wgeuh1i2	15	5	the	the	DT
cord-269353-wgeuh1i2	15	6	hypothesis	hypothesis	NN
cord-269353-wgeuh1i2	15	7	that	that	IN
cord-269353-wgeuh1i2	15	8	similarity	similarity	NN
cord-269353-wgeuh1i2	15	9	of	of	IN
cord-269353-wgeuh1i2	15	10	codon	codon	NN
cord-269353-wgeuh1i2	15	11	usage	usage	NN
cord-269353-wgeuh1i2	15	12	preference	preference	NN
cord-269353-wgeuh1i2	15	13	and	and	CC
cord-269353-wgeuh1i2	15	14	the	the	DT
cord-269353-wgeuh1i2	15	15	degree	degree	NN
cord-269353-wgeuh1i2	15	16	of	of	IN
cord-269353-wgeuh1i2	15	17	matching	match	VBG
cord-269353-wgeuh1i2	15	18	between	between	IN
cord-269353-wgeuh1i2	15	19	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	15	20	and	and	CC
cord-269353-wgeuh1i2	15	21	their	-PRON-	PRP$
cord-269353-wgeuh1i2	15	22	hosts	host	NNS
cord-269353-wgeuh1i2	15	23	will	will	MD
cord-269353-wgeuh1i2	15	24	be	be	VB
cord-269353-wgeuh1i2	15	25	lower	low	JJR
cord-269353-wgeuh1i2	15	26	than	than	IN
cord-269353-wgeuh1i2	15	27	that	that	DT
cord-269353-wgeuh1i2	15	28	of	of	IN
cord-269353-wgeuh1i2	15	29	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	15	30	,	,	,
cord-269353-wgeuh1i2	15	31	which	which	WDT
cord-269353-wgeuh1i2	15	32	only	only	RB
cord-269353-wgeuh1i2	15	33	need	need	VBP
cord-269353-wgeuh1i2	15	34	to	to	TO
cord-269353-wgeuh1i2	15	35	coevolve	coevolve	VB
cord-269353-wgeuh1i2	15	36	with	with	IN
cord-269353-wgeuh1i2	15	37	few	few	JJ
cord-269353-wgeuh1i2	15	38	hosts	host	NNS
cord-269353-wgeuh1i2	15	39	.	.	.
cord-269353-wgeuh1i2	16	1	We	-PRON-	PRP
cord-269353-wgeuh1i2	16	2	compare	compare	VBP
cord-269353-wgeuh1i2	16	3	the	the	DT
cord-269353-wgeuh1i2	16	4	patterns	pattern	NNS
cord-269353-wgeuh1i2	16	5	of	of	IN
cord-269353-wgeuh1i2	16	6	codon	codon	NN
cord-269353-wgeuh1i2	16	7	usage	usage	NN
cord-269353-wgeuh1i2	16	8	in	in	IN
cord-269353-wgeuh1i2	16	9	255	255	CD
cord-269353-wgeuh1i2	16	10	virus	virus	NN
cord-269353-wgeuh1i2	16	11	genomes	genome	NNS
cord-269353-wgeuh1i2	16	12	to	to	TO
cord-269353-wgeuh1i2	16	13	test	test	VB
cord-269353-wgeuh1i2	16	14	this	this	DT
cord-269353-wgeuh1i2	16	15	hypothesis	hypothesis	NN
cord-269353-wgeuh1i2	16	16	.	.	.
cord-269353-wgeuh1i2	17	1	Our	-PRON-	PRP$
cord-269353-wgeuh1i2	17	2	results	result	NNS
cord-269353-wgeuh1i2	17	3	show	show	VBP
cord-269353-wgeuh1i2	17	4	that	that	IN
cord-269353-wgeuh1i2	17	5	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	17	6	have	have	VBP
cord-269353-wgeuh1i2	17	7	a	a	DT
cord-269353-wgeuh1i2	17	8	higher	high	JJR
cord-269353-wgeuh1i2	17	9	degree	degree	NN
cord-269353-wgeuh1i2	17	10	of	of	IN
cord-269353-wgeuh1i2	17	11	matching	match	VBG
cord-269353-wgeuh1i2	17	12	to	to	IN
cord-269353-wgeuh1i2	17	13	their	-PRON-	PRP$
cord-269353-wgeuh1i2	17	14	hosts	host	NNS
cord-269353-wgeuh1i2	17	15	'	'	POS
cord-269353-wgeuh1i2	17	16	tRNA	trna	NN
cord-269353-wgeuh1i2	17	17	pools	pool	NNS
cord-269353-wgeuh1i2	17	18	than	than	IN
cord-269353-wgeuh1i2	17	19	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	17	20	.	.	.
cord-269353-wgeuh1i2	18	1	Further	further	RB
cord-269353-wgeuh1i2	18	2	,	,	,
cord-269353-wgeuh1i2	18	3	analysis	analysis	NN
cord-269353-wgeuh1i2	18	4	of	of	IN
cord-269353-wgeuh1i2	18	5	the	the	DT
cord-269353-wgeuh1i2	18	6	effective	effective	JJ
cord-269353-wgeuh1i2	18	7	number	number	NN
cord-269353-wgeuh1i2	18	8	of	of	IN
cord-269353-wgeuh1i2	18	9	codons	codon	NNS
cord-269353-wgeuh1i2	18	10	(	(	-LRB-
cord-269353-wgeuh1i2	18	11	ENC	ENC	NNP
cord-269353-wgeuh1i2	18	12	)	)	-RRB-
cord-269353-wgeuh1i2	18	13	infers	infer	VBZ
cord-269353-wgeuh1i2	18	14	that	that	IN
cord-269353-wgeuh1i2	18	15	codon	codon	NN
cord-269353-wgeuh1i2	18	16	usage	usage	NN
cord-269353-wgeuh1i2	18	17	bias	bias	NN
cord-269353-wgeuh1i2	18	18	of	of	IN
cord-269353-wgeuh1i2	18	19	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	18	20	is	be	VBZ
cord-269353-wgeuh1i2	18	21	relatively	relatively	RB
cord-269353-wgeuh1i2	18	22	stronger	strong	JJR
cord-269353-wgeuh1i2	18	23	than	than	IN
cord-269353-wgeuh1i2	18	24	that	that	DT
cord-269353-wgeuh1i2	18	25	of	of	IN
cord-269353-wgeuh1i2	18	26	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	18	27	.	.	.
cord-269353-wgeuh1i2	19	1	Thus	thus	RB
cord-269353-wgeuh1i2	19	2	,	,	,
cord-269353-wgeuh1i2	19	3	codon	codon	NN
cord-269353-wgeuh1i2	19	4	usage	usage	NN
cord-269353-wgeuh1i2	19	5	of	of	IN
cord-269353-wgeuh1i2	19	6	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	19	7	tends	tend	VBZ
cord-269353-wgeuh1i2	19	8	to	to	TO
cord-269353-wgeuh1i2	19	9	better	better	RB
cord-269353-wgeuh1i2	19	10	match	match	VB
cord-269353-wgeuh1i2	19	11	their	-PRON-	PRP$
cord-269353-wgeuh1i2	19	12	host	host	NN
cord-269353-wgeuh1i2	19	13	than	than	IN
cord-269353-wgeuh1i2	19	14	that	that	DT
cord-269353-wgeuh1i2	19	15	of	of	IN
cord-269353-wgeuh1i2	19	16	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	19	17	.	.	.
cord-269353-wgeuh1i2	20	1	This	this	DT
cord-269353-wgeuh1i2	20	2	supports	support	VBZ
cord-269353-wgeuh1i2	20	3	the	the	DT
cord-269353-wgeuh1i2	20	4	hypothesis	hypothesis	NN
cord-269353-wgeuh1i2	20	5	that	that	WDT
cord-269353-wgeuh1i2	20	6	viruses	virus	NNS
cord-269353-wgeuh1i2	20	7	adapt	adapt	VBP
cord-269353-wgeuh1i2	20	8	to	to	IN
cord-269353-wgeuh1i2	20	9	the	the	DT
cord-269353-wgeuh1i2	20	10	expression	expression	NN
cord-269353-wgeuh1i2	20	11	system	system	NN
cord-269353-wgeuh1i2	20	12	of	of	IN
cord-269353-wgeuh1i2	20	13	their	-PRON-	PRP$
cord-269353-wgeuh1i2	20	14	host(s	host(s	NNP
cord-269353-wgeuh1i2	20	15	)	)	-RRB-
cord-269353-wgeuh1i2	20	16	.	.	.
cord-269353-wgeuh1i2	21	1	Viruses	virus	NNS
cord-269353-wgeuh1i2	21	2	are	be	VBP
cord-269353-wgeuh1i2	21	3	pure	pure	JJ
cord-269353-wgeuh1i2	21	4	parasites	parasite	NNS
cord-269353-wgeuh1i2	21	5	.	.	.
cord-269353-wgeuh1i2	22	1	They	-PRON-	PRP
cord-269353-wgeuh1i2	22	2	depend	depend	VBP
cord-269353-wgeuh1i2	22	3	on	on	IN
cord-269353-wgeuh1i2	22	4	their	-PRON-	PRP$
cord-269353-wgeuh1i2	22	5	hosts	host	NNS
cord-269353-wgeuh1i2	22	6	'	'	POS
cord-269353-wgeuh1i2	22	7	cellular	cellular	JJ
cord-269353-wgeuh1i2	22	8	structure	structure	NN
cord-269353-wgeuh1i2	22	9	and	and	CC
cord-269353-wgeuh1i2	22	10	metabolism	metabolism	NN
cord-269353-wgeuh1i2	22	11	to	to	TO
cord-269353-wgeuh1i2	22	12	replicate	replicate	VB
cord-269353-wgeuh1i2	22	13	and	and	CC
cord-269353-wgeuh1i2	22	14	assemble	assemble	VB
cord-269353-wgeuh1i2	22	15	,	,	,
cord-269353-wgeuh1i2	22	16	i.e.	i.e.	FW
cord-269353-wgeuh1i2	22	17	,	,	,
cord-269353-wgeuh1i2	22	18	survive	survive	VB
cord-269353-wgeuh1i2	22	19	.	.	.
cord-269353-wgeuh1i2	23	1	Most	Most	JJS
cord-269353-wgeuh1i2	23	2	of	of	IN
cord-269353-wgeuh1i2	23	3	their	-PRON-	PRP$
cord-269353-wgeuh1i2	23	4	genomes	genome	NNS
cord-269353-wgeuh1i2	23	5	do	do	VBP
cord-269353-wgeuh1i2	23	6	not	not	RB
cord-269353-wgeuh1i2	23	7	encode	encode	VB
cord-269353-wgeuh1i2	23	8	tRNAs	trna	NNS
cord-269353-wgeuh1i2	23	9	,	,	,
cord-269353-wgeuh1i2	23	10	thus	thus	RB
cord-269353-wgeuh1i2	23	11	their	-PRON-	PRP$
cord-269353-wgeuh1i2	23	12	translation	translation	NN
cord-269353-wgeuh1i2	23	13	of	of	IN
cord-269353-wgeuh1i2	23	14	viral	viral	JJ
cord-269353-wgeuh1i2	23	15	proteins	protein	NNS
cord-269353-wgeuh1i2	23	16	relies	rely	VBZ
cord-269353-wgeuh1i2	23	17	on	on	IN
cord-269353-wgeuh1i2	23	18	the	the	DT
cord-269353-wgeuh1i2	23	19	hosts	host	NNS
cord-269353-wgeuh1i2	23	20	'	'	POS
cord-269353-wgeuh1i2	23	21	tRNA	trna	NN
cord-269353-wgeuh1i2	23	22	pools	pool	NNS
cord-269353-wgeuh1i2	23	23	(	(	-LRB-
cord-269353-wgeuh1i2	23	24	Kumar	Kumar	NNP
cord-269353-wgeuh1i2	23	25	et	et	NNP
cord-269353-wgeuh1i2	23	26	al	al	NNP
cord-269353-wgeuh1i2	23	27	.	.	.
cord-269353-wgeuh1i2	23	28	2016	2016	CD
cord-269353-wgeuh1i2	23	29	)	)	-RRB-
cord-269353-wgeuh1i2	23	30	.	.	.
cord-269353-wgeuh1i2	24	1	A	a	DT
cord-269353-wgeuh1i2	24	2	successful	successful	JJ
cord-269353-wgeuh1i2	24	3	infection	infection	NN
cord-269353-wgeuh1i2	24	4	requires	require	VBZ
cord-269353-wgeuh1i2	24	5	that	that	IN
cord-269353-wgeuh1i2	24	6	viruses	virus	NNS
cord-269353-wgeuh1i2	24	7	possess	possess	VBP
cord-269353-wgeuh1i2	24	8	the	the	DT
cord-269353-wgeuh1i2	24	9	ability	ability	NN
cord-269353-wgeuh1i2	24	10	to	to	TO
cord-269353-wgeuh1i2	24	11	enter	enter	VB
cord-269353-wgeuh1i2	24	12	the	the	DT
cord-269353-wgeuh1i2	24	13	host	host	NN
cord-269353-wgeuh1i2	24	14	cell	cell	NN
cord-269353-wgeuh1i2	24	15	,	,	,
cord-269353-wgeuh1i2	24	16	and	and	CC
cord-269353-wgeuh1i2	24	17	efficiently	efficiently	RB
cord-269353-wgeuh1i2	24	18	produce	produce	VB
cord-269353-wgeuh1i2	24	19	new	new	JJ
cord-269353-wgeuh1i2	24	20	viruses	virus	NNS
cord-269353-wgeuh1i2	24	21	.	.	.
cord-269353-wgeuh1i2	25	1	The	the	DT
cord-269353-wgeuh1i2	25	2	degenerate	degenerate	JJ
cord-269353-wgeuh1i2	25	3	genetic	genetic	JJ
cord-269353-wgeuh1i2	25	4	code	code	NN
cord-269353-wgeuh1i2	25	5	unequally	unequally	RB
cord-269353-wgeuh1i2	25	6	uses	use	VBZ
cord-269353-wgeuh1i2	25	7	synonymous	synonymous	JJ
cord-269353-wgeuh1i2	25	8	codons	codon	NNS
cord-269353-wgeuh1i2	25	9	,	,	,
cord-269353-wgeuh1i2	25	10	which	which	WDT
cord-269353-wgeuh1i2	25	11	code	code	NN
cord-269353-wgeuh1i2	25	12	for	for	IN
cord-269353-wgeuh1i2	25	13	the	the	DT
cord-269353-wgeuh1i2	25	14	same	same	JJ
cord-269353-wgeuh1i2	25	15	amino	amino	NN
cord-269353-wgeuh1i2	25	16	acid	acid	NN
cord-269353-wgeuh1i2	25	17	(	(	-LRB-
cord-269353-wgeuh1i2	25	18	Cristina	Cristina	NNP
cord-269353-wgeuh1i2	25	19	et	et	NNP
cord-269353-wgeuh1i2	25	20	al	al	NNP
cord-269353-wgeuh1i2	25	21	.	.	.
cord-269353-wgeuh1i2	25	22	2016	2016	CD
cord-269353-wgeuh1i2	25	23	;	;	:
cord-269353-wgeuh1i2	25	24	Kanaya	Kanaya	NNP
cord-269353-wgeuh1i2	25	25	et	et	NNP
cord-269353-wgeuh1i2	25	26	al	al	NNP
cord-269353-wgeuh1i2	25	27	.	.	.
cord-269353-wgeuh1i2	26	1	2001	2001	CD
cord-269353-wgeuh1i2	26	2	;	;	:
cord-269353-wgeuh1i2	26	3	Shackelton	Shackelton	NNP
cord-269353-wgeuh1i2	26	4	et	et	FW
cord-269353-wgeuh1i2	26	5	al	al	NNP
cord-269353-wgeuh1i2	26	6	.	.	.
cord-269353-wgeuh1i2	27	1	2006	2006	CD
cord-269353-wgeuh1i2	27	2	;	;	:
cord-269353-wgeuh1i2	27	3	Tsai	Tsai	NNP
cord-269353-wgeuh1i2	27	4	et	et	NNP
cord-269353-wgeuh1i2	27	5	al	al	NNP
cord-269353-wgeuh1i2	27	6	.	.	NNP
cord-269353-wgeuh1i2	27	7	2007	2007	CD
cord-269353-wgeuh1i2	27	8	)	)	-RRB-
cord-269353-wgeuh1i2	27	9	.	.	.
cord-269353-wgeuh1i2	28	1	The	the	DT
cord-269353-wgeuh1i2	28	2	redundancy	redundancy	NN
cord-269353-wgeuh1i2	28	3	of	of	IN
cord-269353-wgeuh1i2	28	4	the	the	DT
cord-269353-wgeuh1i2	28	5	genetic	genetic	JJ
cord-269353-wgeuh1i2	28	6	code	code	NN
cord-269353-wgeuh1i2	28	7	provides	provide	VBZ
cord-269353-wgeuh1i2	28	8	the	the	DT
cord-269353-wgeuh1i2	28	9	opportunity	opportunity	NN
cord-269353-wgeuh1i2	28	10	to	to	TO
cord-269353-wgeuh1i2	28	11	shape	shape	VB
cord-269353-wgeuh1i2	28	12	the	the	DT
cord-269353-wgeuh1i2	28	13	efficiency	efficiency	NN
cord-269353-wgeuh1i2	28	14	and	and	CC
cord-269353-wgeuh1i2	28	15	accuracy	accuracy	NN
cord-269353-wgeuh1i2	28	16	of	of	IN
cord-269353-wgeuh1i2	28	17	protein	protein	NN
cord-269353-wgeuh1i2	28	18	production	production	NN
cord-269353-wgeuh1i2	28	19	,	,	,
cord-269353-wgeuh1i2	28	20	while	while	IN
cord-269353-wgeuh1i2	28	21	maintaining	maintain	VBG
cord-269353-wgeuh1i2	28	22	the	the	DT
cord-269353-wgeuh1i2	28	23	same	same	JJ
cord-269353-wgeuh1i2	28	24	amino	amino	NN
cord-269353-wgeuh1i2	28	25	acid	acid	NN
cord-269353-wgeuh1i2	28	26	sequence	sequence	NN
cord-269353-wgeuh1i2	28	27	(	(	-LRB-
cord-269353-wgeuh1i2	28	28	Chaney	Chaney	NNP
cord-269353-wgeuh1i2	28	29	and	and	CC
cord-269353-wgeuh1i2	28	30	Clark	Clark	NNP
cord-269353-wgeuh1i2	28	31	2015	2015	CD
cord-269353-wgeuh1i2	28	32	;	;	:
cord-269353-wgeuh1i2	28	33	Plotkin	Plotkin	NNP
cord-269353-wgeuh1i2	28	34	and	and	CC
cord-269353-wgeuh1i2	28	35	Kudla	Kudla	NNP
cord-269353-wgeuh1i2	28	36	2011	2011	CD
cord-269353-wgeuh1i2	28	37	;	;	:
cord-269353-wgeuh1i2	28	38	Stoletzki	Stoletzki	NNP
cord-269353-wgeuh1i2	28	39	and	and	CC
cord-269353-wgeuh1i2	28	40	Eyre	Eyre	NNP
cord-269353-wgeuh1i2	28	41	-	-	HYPH
cord-269353-wgeuh1i2	28	42	Walker	Walker	NNP
cord-269353-wgeuh1i2	28	43	2007	2007	CD
cord-269353-wgeuh1i2	28	44	)	)	-RRB-
cord-269353-wgeuh1i2	28	45	.	.	.
cord-269353-wgeuh1i2	29	1	Considering	consider	VBG
cord-269353-wgeuh1i2	29	2	that	that	IN
cord-269353-wgeuh1i2	29	3	the	the	DT
cord-269353-wgeuh1i2	29	4	translation	translation	NN
cord-269353-wgeuh1i2	29	5	of	of	IN
cord-269353-wgeuh1i2	29	6	viral	viral	JJ
cord-269353-wgeuh1i2	29	7	proteins	protein	NNS
cord-269353-wgeuh1i2	29	8	relies	rely	VBZ
cord-269353-wgeuh1i2	29	9	on	on	IN
cord-269353-wgeuh1i2	29	10	the	the	DT
cord-269353-wgeuh1i2	29	11	host	host	NN
cord-269353-wgeuh1i2	29	12	's	's	POS
cord-269353-wgeuh1i2	29	13	pool	pool	NN
cord-269353-wgeuh1i2	29	14	of	of	IN
cord-269353-wgeuh1i2	29	15	tRNAs	trna	NNS
cord-269353-wgeuh1i2	29	16	,	,	,
cord-269353-wgeuh1i2	29	17	codon	codon	NN
cord-269353-wgeuh1i2	29	18	usage	usage	NN
cord-269353-wgeuh1i2	29	19	of	of	IN
cord-269353-wgeuh1i2	29	20	a	a	DT
cord-269353-wgeuh1i2	29	21	virus	virus	NN
cord-269353-wgeuh1i2	29	22	must	must	MD
cord-269353-wgeuh1i2	29	23	coevolve	coevolve	VB
cord-269353-wgeuh1i2	29	24	with	with	IN
cord-269353-wgeuh1i2	29	25	its	-PRON-	PRP$
cord-269353-wgeuh1i2	29	26	host	host	NN
cord-269353-wgeuh1i2	29	27	to	to	TO
cord-269353-wgeuh1i2	29	28	efficiently	efficiently	RB
cord-269353-wgeuh1i2	29	29	use	use	VB
cord-269353-wgeuh1i2	29	30	host	host	NN
cord-269353-wgeuh1i2	29	31	resources	resource	NNS
cord-269353-wgeuh1i2	29	32	.	.	.
cord-269353-wgeuh1i2	30	1	It	-PRON-	PRP
cord-269353-wgeuh1i2	30	2	is	be	VBZ
cord-269353-wgeuh1i2	30	3	expected	expect	VBN
cord-269353-wgeuh1i2	30	4	that	that	IN
cord-269353-wgeuh1i2	30	5	higher	high	JJR
cord-269353-wgeuh1i2	30	6	similarity	similarity	NN
cord-269353-wgeuh1i2	30	7	of	of	IN
cord-269353-wgeuh1i2	30	8	codon	codon	NN
cord-269353-wgeuh1i2	30	9	usage	usage	NN
cord-269353-wgeuh1i2	30	10	pattern	pattern	NN
cord-269353-wgeuh1i2	30	11	will	will	MD
cord-269353-wgeuh1i2	30	12	better	better	RB
cord-269353-wgeuh1i2	30	13	facilitate	facilitate	VB
cord-269353-wgeuh1i2	30	14	their	-PRON-	PRP$
cord-269353-wgeuh1i2	30	15	replication	replication	NN
cord-269353-wgeuh1i2	30	16	.	.	.
cord-269353-wgeuh1i2	31	1	The	the	DT
cord-269353-wgeuh1i2	31	2	extent	extent	NN
cord-269353-wgeuh1i2	31	3	of	of	IN
cord-269353-wgeuh1i2	31	4	codon	codon	NN
cord-269353-wgeuh1i2	31	5	usage	usage	NN
cord-269353-wgeuh1i2	31	6	among	among	IN
cord-269353-wgeuh1i2	31	7	viruses	virus	NNS
cord-269353-wgeuh1i2	31	8	and	and	CC
cord-269353-wgeuh1i2	31	9	their	-PRON-	PRP$
cord-269353-wgeuh1i2	31	10	hosts	host	NNS
cord-269353-wgeuh1i2	31	11	has	have	VBZ
cord-269353-wgeuh1i2	31	12	been	be	VBN
cord-269353-wgeuh1i2	31	13	suggested	suggest	VBN
cord-269353-wgeuh1i2	31	14	to	to	TO
cord-269353-wgeuh1i2	31	15	affect	affect	VB
cord-269353-wgeuh1i2	31	16	viral	viral	JJ
cord-269353-wgeuh1i2	31	17	survival	survival	NN
cord-269353-wgeuh1i2	31	18	,	,	,
cord-269353-wgeuh1i2	31	19	fitness	fitness	NN
cord-269353-wgeuh1i2	31	20	,	,	,
cord-269353-wgeuh1i2	31	21	and	and	CC
cord-269353-wgeuh1i2	31	22	evasion	evasion	NN
cord-269353-wgeuh1i2	31	23	from	from	IN
cord-269353-wgeuh1i2	31	24	host	host	NN
cord-269353-wgeuh1i2	31	25	's	's	POS
cord-269353-wgeuh1i2	31	26	immune	immune	JJ
cord-269353-wgeuh1i2	31	27	system	system	NN
cord-269353-wgeuh1i2	31	28	(	(	-LRB-
cord-269353-wgeuh1i2	31	29	Burns	Burns	NNP
cord-269353-wgeuh1i2	31	30	et	et	NNP
cord-269353-wgeuh1i2	31	31	al	al	NNP
cord-269353-wgeuh1i2	31	32	.	.	.
cord-269353-wgeuh1i2	31	33	2006	2006	CD
cord-269353-wgeuh1i2	32	1	;	;	:
cord-269353-wgeuh1i2	32	2	Costafreda	Costafreda	NNP
cord-269353-wgeuh1i2	32	3	et	et	NNP
cord-269353-wgeuh1i2	32	4	al	al	NNP
cord-269353-wgeuh1i2	32	5	.	.	.
cord-269353-wgeuh1i2	33	1	2014	2014	CD
cord-269353-wgeuh1i2	33	2	;	;	:
cord-269353-wgeuh1i2	33	3	Mueller	Mueller	NNP
cord-269353-wgeuh1i2	33	4	et	et	NNP
cord-269353-wgeuh1i2	33	5	al	al	NNP
cord-269353-wgeuh1i2	33	6	.	.	.
cord-269353-wgeuh1i2	33	7	2006	2006	CD
cord-269353-wgeuh1i2	33	8	)	)	-RRB-
cord-269353-wgeuh1i2	33	9	.	.	.
cord-269353-wgeuh1i2	34	1	Because	because	IN
cord-269353-wgeuh1i2	34	2	the	the	DT
cord-269353-wgeuh1i2	34	3	virus	virus	NN
cord-269353-wgeuh1i2	34	4	relies	rely	VBZ
cord-269353-wgeuh1i2	34	5	on	on	IN
cord-269353-wgeuh1i2	34	6	the	the	DT
cord-269353-wgeuh1i2	34	7	host	host	NN
cord-269353-wgeuh1i2	34	8	's	's	POS
cord-269353-wgeuh1i2	34	9	cellular	cellular	JJ
cord-269353-wgeuh1i2	34	10	machinery	machinery	NN
cord-269353-wgeuh1i2	34	11	for	for	IN
cord-269353-wgeuh1i2	34	12	its	-PRON-	PRP$
cord-269353-wgeuh1i2	34	13	replication	replication	NN
cord-269353-wgeuh1i2	34	14	,	,	,
cord-269353-wgeuh1i2	34	15	codon	codon	NN
cord-269353-wgeuh1i2	34	16	usage	usage	NN
cord-269353-wgeuh1i2	34	17	bias	bias	NN
cord-269353-wgeuh1i2	34	18	was	be	VBD
cord-269353-wgeuh1i2	34	19	suggested	suggest	VBN
cord-269353-wgeuh1i2	34	20	to	to	TO
cord-269353-wgeuh1i2	34	21	play	play	VB
cord-269353-wgeuh1i2	34	22	a	a	DT
cord-269353-wgeuh1i2	34	23	role	role	NN
cord-269353-wgeuh1i2	34	24	in	in	IN
cord-269353-wgeuh1i2	34	25	the	the	DT
cord-269353-wgeuh1i2	34	26	adaptation	adaptation	NN
cord-269353-wgeuh1i2	34	27	of	of	IN
cord-269353-wgeuh1i2	34	28	a	a	DT
cord-269353-wgeuh1i2	34	29	virus	virus	NN
cord-269353-wgeuh1i2	34	30	to	to	IN
cord-269353-wgeuh1i2	34	31	its	-PRON-	PRP$
cord-269353-wgeuh1i2	34	32	host	host	NN
cord-269353-wgeuh1i2	34	33	.	.	.
cord-269353-wgeuh1i2	35	1	Codon	codon	NN
cord-269353-wgeuh1i2	35	2	usage	usage	NN
cord-269353-wgeuh1i2	35	3	bias	bias	NN
cord-269353-wgeuh1i2	35	4	is	be	VBZ
cord-269353-wgeuh1i2	35	5	common	common	JJ
cord-269353-wgeuh1i2	35	6	in	in	IN
cord-269353-wgeuh1i2	35	7	viruses	virus	NNS
cord-269353-wgeuh1i2	36	1	(	(	-LRB-
cord-269353-wgeuh1i2	36	2	Butt	Butt	NNP
cord-269353-wgeuh1i2	36	3	et	et	FW
cord-269353-wgeuh1i2	36	4	al	al	NNP
cord-269353-wgeuh1i2	36	5	.	.	.
cord-269353-wgeuh1i2	37	1	2014	2014	CD
cord-269353-wgeuh1i2	37	2	;	;	:
cord-269353-wgeuh1i2	37	3	Castells	Castells	NNP
cord-269353-wgeuh1i2	37	4	et	et	NNP
cord-269353-wgeuh1i2	37	5	al	al	NNP
cord-269353-wgeuh1i2	37	6	.	.	.
cord-269353-wgeuh1i2	37	7	2017	2017	CD
cord-269353-wgeuh1i2	38	1	;	;	:
cord-269353-wgeuh1i2	38	2	Cristina	Cristina	NNP
cord-269353-wgeuh1i2	38	3	et	et	NNP
cord-269353-wgeuh1i2	38	4	al	al	NNP
cord-269353-wgeuh1i2	38	5	.	.	.
cord-269353-wgeuh1i2	38	6	2016	2016	CD
cord-269353-wgeuh1i2	39	1	;	;	:
cord-269353-wgeuh1i2	39	2	He	-PRON-	PRP
cord-269353-wgeuh1i2	39	3	et	et	FW
cord-269353-wgeuh1i2	39	4	al	al	NNP
cord-269353-wgeuh1i2	39	5	.	.	.
cord-269353-wgeuh1i2	39	6	2017	2017	CD
cord-269353-wgeuh1i2	40	1	;	;	:
cord-269353-wgeuh1i2	40	2	Li	Li	NNP
cord-269353-wgeuh1i2	40	3	et	et	NNP
cord-269353-wgeuh1i2	40	4	al	al	NNP
cord-269353-wgeuh1i2	40	5	.	.	.
cord-269353-wgeuh1i2	40	6	2017	2017	CD
cord-269353-wgeuh1i2	41	1	;	;	:
cord-269353-wgeuh1i2	41	2	Moratorio	Moratorio	NNP
cord-269353-wgeuh1i2	41	3	et	et	NNP
cord-269353-wgeuh1i2	41	4	al	al	NNP
cord-269353-wgeuh1i2	41	5	.	.	.
cord-269353-wgeuh1i2	42	1	2013	2013	CD
cord-269353-wgeuh1i2	42	2	;	;	:
cord-269353-wgeuh1i2	42	3	Singh	Singh	NNP
cord-269353-wgeuh1i2	42	4	et	et	NNP
cord-269353-wgeuh1i2	42	5	al	al	NNP
cord-269353-wgeuh1i2	42	6	.	.	.
cord-269353-wgeuh1i2	42	7	2016	2016	CD
cord-269353-wgeuh1i2	42	8	;	;	.
cord-269353-wgeuh1i2	43	1	Su	Su	NNP
cord-269353-wgeuh1i2	43	2	et	et	FW
cord-269353-wgeuh1i2	43	3	al	al	NNP
cord-269353-wgeuh1i2	43	4	.	.	.
cord-269353-wgeuh1i2	43	5	2017	2017	CD
cord-269353-wgeuh1i2	44	1	;	;	:
cord-269353-wgeuh1i2	44	2	Xu	Xu	NNP
cord-269353-wgeuh1i2	44	3	et	et	NNP
cord-269353-wgeuh1i2	44	4	al	al	NNP
cord-269353-wgeuh1i2	44	5	.	.	.
cord-269353-wgeuh1i2	44	6	2017	2017	CD
cord-269353-wgeuh1i2	45	1	;	;	:
cord-269353-wgeuh1i2	45	2	Zang	Zang	NNP
cord-269353-wgeuh1i2	45	3	et	et	NNP
cord-269353-wgeuh1i2	45	4	al	al	NNP
cord-269353-wgeuh1i2	45	5	.	.	.
cord-269353-wgeuh1i2	45	6	2017	2017	CD
cord-269353-wgeuh1i2	46	1	;	;	:
cord-269353-wgeuh1i2	46	2	Zhao	Zhao	NNP
cord-269353-wgeuh1i2	46	3	et	et	NNP
cord-269353-wgeuh1i2	46	4	al	al	NNP
cord-269353-wgeuh1i2	46	5	.	.	.
cord-269353-wgeuh1i2	46	6	2016	2016	CD
cord-269353-wgeuh1i2	46	7	)	)	-RRB-
cord-269353-wgeuh1i2	46	8	.	.	.
cord-269353-wgeuh1i2	47	1	Efficient	efficient	JJ
cord-269353-wgeuh1i2	47	2	replication	replication	NN
cord-269353-wgeuh1i2	47	3	seemingly	seemingly	RB
cord-269353-wgeuh1i2	47	4	requires	require	VBZ
cord-269353-wgeuh1i2	47	5	that	that	IN
cord-269353-wgeuh1i2	47	6	a	a	DT
cord-269353-wgeuh1i2	47	7	virus	virus	NN
cord-269353-wgeuh1i2	47	8	and	and	CC
cord-269353-wgeuh1i2	47	9	host	host	NN
cord-269353-wgeuh1i2	47	10	have	have	VBP
cord-269353-wgeuh1i2	47	11	similar	similar	JJ
cord-269353-wgeuh1i2	47	12	codon	codon	NN
cord-269353-wgeuh1i2	47	13	usage	usage	NN
cord-269353-wgeuh1i2	47	14	patterns	pattern	NNS
cord-269353-wgeuh1i2	47	15	to	to	TO
cord-269353-wgeuh1i2	47	16	share	share	VB
cord-269353-wgeuh1i2	47	17	a	a	DT
cord-269353-wgeuh1i2	47	18	tRNA	tRNA	NNP
cord-269353-wgeuh1i2	47	19	pool	pool	NN
cord-269353-wgeuh1i2	47	20	.	.	.
cord-269353-wgeuh1i2	48	1	Co	co	NN
cord-269353-wgeuh1i2	48	2	-	-	NN
cord-269353-wgeuh1i2	48	3	evolution	evolution	NN
cord-269353-wgeuh1i2	48	4	between	between	IN
cord-269353-wgeuh1i2	48	5	a	a	DT
cord-269353-wgeuh1i2	48	6	certain	certain	JJ
cord-269353-wgeuh1i2	48	7	RNA	RNA	NNP
cord-269353-wgeuh1i2	48	8	virus	virus	NN
cord-269353-wgeuh1i2	48	9	and	and	CC
cord-269353-wgeuh1i2	48	10	its	-PRON-	PRP$
cord-269353-wgeuh1i2	48	11	susceptible	susceptible	JJ
cord-269353-wgeuh1i2	48	12	hosts	host	NNS
cord-269353-wgeuh1i2	48	13	at	at	IN
cord-269353-wgeuh1i2	48	14	codon	codon	NN
cord-269353-wgeuh1i2	48	15	usages	usage	NNS
cord-269353-wgeuh1i2	48	16	have	have	VBP
cord-269353-wgeuh1i2	48	17	been	be	VBN
cord-269353-wgeuh1i2	48	18	observed	observe	VBN
cord-269353-wgeuh1i2	48	19	in	in	IN
cord-269353-wgeuh1i2	48	20	many	many	JJ
cord-269353-wgeuh1i2	48	21	viruses	virus	NNS
cord-269353-wgeuh1i2	48	22	(	(	-LRB-
cord-269353-wgeuh1i2	48	23	Franzo	Franzo	NNP
cord-269353-wgeuh1i2	48	24	et	et	NNP
cord-269353-wgeuh1i2	48	25	al	al	NNP
cord-269353-wgeuh1i2	48	26	.	.	.
cord-269353-wgeuh1i2	48	27	2017	2017	CD
cord-269353-wgeuh1i2	48	28	;	;	:
cord-269353-wgeuh1i2	48	29	Rahman	Rahman	NNP
cord-269353-wgeuh1i2	48	30	et	et	NNP
cord-269353-wgeuh1i2	48	31	al	al	NNP
cord-269353-wgeuh1i2	48	32	.	.	.
cord-269353-wgeuh1i2	48	33	2017	2017	CD
cord-269353-wgeuh1i2	48	34	;	;	:
cord-269353-wgeuh1i2	48	35	Simón	Simón	NNP
cord-269353-wgeuh1i2	48	36	et	et	NNP
cord-269353-wgeuh1i2	48	37	al	al	NNP
cord-269353-wgeuh1i2	48	38	.	.	.
cord-269353-wgeuh1i2	48	39	2017	2017	CD
cord-269353-wgeuh1i2	48	40	)	)	-RRB-
cord-269353-wgeuh1i2	48	41	.	.	.
cord-269353-wgeuh1i2	49	1	Some	some	DT
cord-269353-wgeuh1i2	49	2	viruses	virus	NNS
cord-269353-wgeuh1i2	49	3	have	have	VBP
cord-269353-wgeuh1i2	49	4	a	a	DT
cord-269353-wgeuh1i2	49	5	broad	broad	JJ
cord-269353-wgeuh1i2	49	6	ranges	range	NNS
cord-269353-wgeuh1i2	49	7	of	of	IN
cord-269353-wgeuh1i2	49	8	hosts	host	NNS
cord-269353-wgeuh1i2	49	9	(	(	-LRB-
cord-269353-wgeuh1i2	49	10	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	49	11	)	)	-RRB-
cord-269353-wgeuh1i2	49	12	,	,	,
cord-269353-wgeuh1i2	49	13	such	such	JJ
cord-269353-wgeuh1i2	49	14	as	as	IN
cord-269353-wgeuh1i2	49	15	arbovirus	arbovirus	NNP
cord-269353-wgeuh1i2	49	16	.	.	.
cord-269353-wgeuh1i2	50	1	These	these	DT
cord-269353-wgeuh1i2	50	2	can	can	MD
cord-269353-wgeuh1i2	50	3	infect	infect	VB
cord-269353-wgeuh1i2	50	4	mammals	mammal	NNS
cord-269353-wgeuh1i2	50	5	,	,	,
cord-269353-wgeuh1i2	50	6	birds	bird	NNS
cord-269353-wgeuh1i2	50	7	,	,	,
cord-269353-wgeuh1i2	50	8	and	and	CC
cord-269353-wgeuh1i2	50	9	insects	insect	NNS
cord-269353-wgeuh1i2	50	10	.	.	.
cord-269353-wgeuh1i2	51	1	Other	other	JJ
cord-269353-wgeuh1i2	51	2	viruses	virus	NNS
cord-269353-wgeuh1i2	51	3	have	have	VBP
cord-269353-wgeuh1i2	51	4	narrow	narrow	JJ
cord-269353-wgeuh1i2	51	5	host	host	NN
cord-269353-wgeuh1i2	51	6	ranges	range	NNS
cord-269353-wgeuh1i2	51	7	(	(	-LRB-
cord-269353-wgeuh1i2	51	8	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	51	9	)	)	-RRB-
cord-269353-wgeuh1i2	51	10	,	,	,
cord-269353-wgeuh1i2	51	11	which	which	WDT
cord-269353-wgeuh1i2	51	12	can	can	MD
cord-269353-wgeuh1i2	51	13	infect	infect	VB
cord-269353-wgeuh1i2	51	14	a	a	DT
cord-269353-wgeuh1i2	51	15	limited	limited	JJ
cord-269353-wgeuh1i2	51	16	number	number	NN
cord-269353-wgeuh1i2	51	17	of	of	IN
cord-269353-wgeuh1i2	51	18	hosts	host	NNS
cord-269353-wgeuh1i2	51	19	only	only	RB
cord-269353-wgeuh1i2	51	20	.	.	.
cord-269353-wgeuh1i2	52	1	Because	because	IN
cord-269353-wgeuh1i2	52	2	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	52	3	must	must	MD
cord-269353-wgeuh1i2	52	4	fit	fit	VB
cord-269353-wgeuh1i2	52	5	to	to	IN
cord-269353-wgeuh1i2	52	6	multiple	multiple	JJ
cord-269353-wgeuh1i2	52	7	hosts	host	NNS
cord-269353-wgeuh1i2	52	8	and	and	CC
cord-269353-wgeuh1i2	52	9	their	-PRON-	PRP$
cord-269353-wgeuh1i2	52	10	diverse	diverse	JJ
cord-269353-wgeuh1i2	52	11	tRNA	trna	NN
cord-269353-wgeuh1i2	52	12	pools	pool	NNS
cord-269353-wgeuh1i2	52	13	and	and	CC
cord-269353-wgeuh1i2	52	14	their	-PRON-	PRP$
cord-269353-wgeuh1i2	52	15	codon	codon	NN
cord-269353-wgeuh1i2	52	16	usage	usage	NN
cord-269353-wgeuh1i2	52	17	has	have	VBZ
cord-269353-wgeuh1i2	52	18	a	a	DT
cord-269353-wgeuh1i2	52	19	relationship	relationship	NN
cord-269353-wgeuh1i2	52	20	with	with	IN
cord-269353-wgeuh1i2	52	21	their	-PRON-	PRP$
cord-269353-wgeuh1i2	52	22	host	host	NN
cord-269353-wgeuh1i2	52	23	,	,	,
cord-269353-wgeuh1i2	52	24	a	a	DT
cord-269353-wgeuh1i2	52	25	tradeoff	tradeoff	NN
cord-269353-wgeuh1i2	52	26	exists	exist	VBZ
cord-269353-wgeuh1i2	52	27	regarding	regard	VBG
cord-269353-wgeuh1i2	52	28	the	the	DT
cord-269353-wgeuh1i2	52	29	extent	extent	NN
cord-269353-wgeuh1i2	52	30	of	of	IN
cord-269353-wgeuh1i2	52	31	codon	codon	NN
cord-269353-wgeuh1i2	52	32	usage	usage	NN
cord-269353-wgeuh1i2	52	33	.	.	.
cord-269353-wgeuh1i2	53	1	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	53	2	must	must	MD
cord-269353-wgeuh1i2	53	3	fit	fit	VB
cord-269353-wgeuh1i2	53	4	to	to	IN
cord-269353-wgeuh1i2	53	5	their	-PRON-	PRP$
cord-269353-wgeuh1i2	53	6	diverse	diverse	JJ
cord-269353-wgeuh1i2	53	7	hosts	host	NNS
cord-269353-wgeuh1i2	53	8	and	and	CC
cord-269353-wgeuh1i2	53	9	,	,	,
cord-269353-wgeuh1i2	53	10	thus	thus	RB
cord-269353-wgeuh1i2	53	11	,	,	,
cord-269353-wgeuh1i2	53	12	the	the	DT
cord-269353-wgeuh1i2	53	13	extent	extent	NN
cord-269353-wgeuh1i2	53	14	of	of	IN
cord-269353-wgeuh1i2	53	15	matching	match	VBG
cord-269353-wgeuh1i2	53	16	for	for	IN
cord-269353-wgeuh1i2	53	17	codon	codon	NN
cord-269353-wgeuh1i2	53	18	usage	usage	NN
cord-269353-wgeuh1i2	53	19	would	would	MD
cord-269353-wgeuh1i2	53	20	be	be	VB
cord-269353-wgeuh1i2	53	21	lower	low	JJR
cord-269353-wgeuh1i2	53	22	than	than	IN
cord-269353-wgeuh1i2	53	23	that	that	DT
cord-269353-wgeuh1i2	53	24	of	of	IN
cord-269353-wgeuh1i2	53	25	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	53	26	,	,	,
cord-269353-wgeuh1i2	53	27	which	which	WDT
cord-269353-wgeuh1i2	53	28	must	must	MD
cord-269353-wgeuh1i2	53	29	fit	fit	VB
cord-269353-wgeuh1i2	53	30	few	few	JJ
cord-269353-wgeuh1i2	53	31	,	,	,
cord-269353-wgeuh1i2	53	32	similar	similar	JJ
cord-269353-wgeuh1i2	53	33	hosts	host	NNS
cord-269353-wgeuh1i2	53	34	.	.	.
cord-269353-wgeuh1i2	54	1	To	to	TO
cord-269353-wgeuh1i2	54	2	test	test	VB
cord-269353-wgeuh1i2	54	3	this	this	DT
cord-269353-wgeuh1i2	54	4	hypothesis	hypothesis	NN
cord-269353-wgeuh1i2	54	5	,	,	,
cord-269353-wgeuh1i2	54	6	we	-PRON-	PRP
cord-269353-wgeuh1i2	54	7	analyze	analyze	VBP
cord-269353-wgeuh1i2	54	8	255	255	CD
cord-269353-wgeuh1i2	54	9	viruses	virus	NNS
cord-269353-wgeuh1i2	54	10	from	from	IN
cord-269353-wgeuh1i2	54	11	20	20	CD
cord-269353-wgeuh1i2	54	12	genera	genus	NNS
cord-269353-wgeuh1i2	54	13	of	of	IN
cord-269353-wgeuh1i2	54	14	positivesense	positivesense	NN
cord-269353-wgeuh1i2	54	15	single	single	RB
cord-269353-wgeuh1i2	54	16	-	-	HYPH
cord-269353-wgeuh1i2	54	17	stranded	strand	VBN
cord-269353-wgeuh1i2	54	18	RNA	RNA	NNP
cord-269353-wgeuh1i2	54	19	(	(	-LRB-
cord-269353-wgeuh1i2	54	20	+	+	CC
cord-269353-wgeuh1i2	54	21	ssRNA	ssrna	NN
cord-269353-wgeuh1i2	54	22	)	)	-RRB-
cord-269353-wgeuh1i2	54	23	viruses	virus	NNS
cord-269353-wgeuh1i2	54	24	(	(	-LRB-
cord-269353-wgeuh1i2	54	25	e.g.	e.g.	RB
cord-269353-wgeuh1i2	54	26	,	,	,
cord-269353-wgeuh1i2	54	27	Flavivirus	Flavivirus	NNP
cord-269353-wgeuh1i2	54	28	,	,	,
cord-269353-wgeuh1i2	54	29	Alphavirus	Alphavirus	NNP
cord-269353-wgeuh1i2	54	30	,	,	,
cord-269353-wgeuh1i2	54	31	Coronavirus	Coronavirus	NNP
cord-269353-wgeuh1i2	54	32	,	,	,
cord-269353-wgeuh1i2	54	33	Torovirus	Torovirus	NNP
cord-269353-wgeuh1i2	54	34	,	,	,
cord-269353-wgeuh1i2	54	35	Arterivirus	Arterivirus	NNP
cord-269353-wgeuh1i2	54	36	,	,	,
cord-269353-wgeuh1i2	54	37	Rubivirus	Rubivirus	NNP
cord-269353-wgeuh1i2	54	38	,	,	,
cord-269353-wgeuh1i2	54	39	Pestivirus	Pestivirus	NNP
cord-269353-wgeuh1i2	54	40	,	,	,
cord-269353-wgeuh1i2	54	41	Hepacivirus	Hepacivirus	NNP
cord-269353-wgeuh1i2	54	42	,	,	,
cord-269353-wgeuh1i2	54	43	Alphamesonivirus	Alphamesonivirus	NNP
cord-269353-wgeuh1i2	54	44	)	)	-RRB-
cord-269353-wgeuh1i2	54	45	.	.	.
cord-269353-wgeuh1i2	55	1	Viruses	virus	NNS
cord-269353-wgeuh1i2	55	2	that	that	WDT
cord-269353-wgeuh1i2	55	3	can	can	MD
cord-269353-wgeuh1i2	55	4	infect	infect	VB
cord-269353-wgeuh1i2	55	5	vertebrates	vertebrate	NNS
cord-269353-wgeuh1i2	55	6	and	and	CC
cord-269353-wgeuh1i2	55	7	invertebrates	invertebrate	NNS
cord-269353-wgeuh1i2	55	8	,	,	,
cord-269353-wgeuh1i2	55	9	such	such	JJ
cord-269353-wgeuh1i2	55	10	as	as	IN
cord-269353-wgeuh1i2	55	11	most	most	JJS
cord-269353-wgeuh1i2	55	12	of	of	IN
cord-269353-wgeuh1i2	55	13	the	the	DT
cord-269353-wgeuh1i2	55	14	Flavivirus	Flavivirus	NNP
cord-269353-wgeuh1i2	55	15	and	and	CC
cord-269353-wgeuh1i2	55	16	Alphavirus	Alphavirus	NNP
cord-269353-wgeuh1i2	55	17	,	,	,
cord-269353-wgeuh1i2	55	18	were	be	VBD
cord-269353-wgeuh1i2	55	19	classified	classify	VBN
cord-269353-wgeuh1i2	55	20	as	as	IN
cord-269353-wgeuh1i2	55	21	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	55	22	,	,	,
cord-269353-wgeuh1i2	55	23	while	while	IN
cord-269353-wgeuh1i2	55	24	other	other	JJ
cord-269353-wgeuh1i2	55	25	viruses	virus	NNS
cord-269353-wgeuh1i2	55	26	that	that	WDT
cord-269353-wgeuh1i2	55	27	can	can	MD
cord-269353-wgeuh1i2	55	28	infect	infect	VB
cord-269353-wgeuh1i2	55	29	either	either	DT
cord-269353-wgeuh1i2	55	30	vertebrate	vertebrate	JJ
cord-269353-wgeuh1i2	55	31	or	or	CC
cord-269353-wgeuh1i2	55	32	invertebrate	invertebrate	NN
cord-269353-wgeuh1i2	55	33	were	be	VBD
cord-269353-wgeuh1i2	55	34	classified	classify	VBN
cord-269353-wgeuh1i2	55	35	as	as	IN
cord-269353-wgeuh1i2	55	36	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	55	37	.	.	.
cord-269353-wgeuh1i2	56	1	The	the	DT
cord-269353-wgeuh1i2	56	2	complete	complete	JJ
cord-269353-wgeuh1i2	56	3	genome	genome	NN
cord-269353-wgeuh1i2	56	4	sequences	sequence	NNS
cord-269353-wgeuh1i2	56	5	of	of	IN
cord-269353-wgeuh1i2	56	6	255	255	CD
cord-269353-wgeuh1i2	56	7	virus	virus	NN
cord-269353-wgeuh1i2	56	8	strains	strain	NNS
cord-269353-wgeuh1i2	56	9	from	from	IN
cord-269353-wgeuh1i2	56	10	the	the	DT
cord-269353-wgeuh1i2	56	11	20	20	CD
cord-269353-wgeuh1i2	56	12	genera	genus	NNS
cord-269353-wgeuh1i2	56	13	of	of	IN
cord-269353-wgeuh1i2	56	14	+	+	CD
cord-269353-wgeuh1i2	56	15	ssRNA	ssrna	NN
cord-269353-wgeuh1i2	57	1	viruses	virus	NNS
cord-269353-wgeuh1i2	57	2	were	be	VBD
cord-269353-wgeuh1i2	57	3	obtained	obtain	VBN
cord-269353-wgeuh1i2	57	4	from	from	IN
cord-269353-wgeuh1i2	57	5	the	the	DT
cord-269353-wgeuh1i2	57	6	GenBank	GenBank	NNP
cord-269353-wgeuh1i2	57	7	database	database	NN
cord-269353-wgeuh1i2	57	8	(	(	-LRB-
cord-269353-wgeuh1i2	57	9	http://www.ncbi.nlm.nih.gov	http://www.ncbi.nlm.nih.gov	NN
cord-269353-wgeuh1i2	57	10	)	)	-RRB-
cord-269353-wgeuh1i2	57	11	.	.	.
cord-269353-wgeuh1i2	58	1	The	the	DT
cord-269353-wgeuh1i2	58	2	information	information	NN
cord-269353-wgeuh1i2	58	3	of	of	IN
cord-269353-wgeuh1i2	58	4	host	host	NN
cord-269353-wgeuh1i2	58	5	range	range	NN
cord-269353-wgeuh1i2	58	6	was	be	VBD
cord-269353-wgeuh1i2	58	7	determined	determine	VBN
cord-269353-wgeuh1i2	58	8	from	from	IN
cord-269353-wgeuh1i2	58	9	NCBI	NCBI	NNP
cord-269353-wgeuh1i2	58	10	(	(	-LRB-
cord-269353-wgeuh1i2	58	11	https://www.ncbi.nlm.nih.gov/taxonomy/	https://www.ncbi.nlm.nih.gov/taxonomy/	NNP
cord-269353-wgeuh1i2	58	12	)	)	-RRB-
cord-269353-wgeuh1i2	58	13	and	and	CC
cord-269353-wgeuh1i2	58	14	the	the	DT
cord-269353-wgeuh1i2	58	15	Ninth	Ninth	NNP
cord-269353-wgeuh1i2	58	16	Report	Report	NNP
cord-269353-wgeuh1i2	58	17	of	of	IN
cord-269353-wgeuh1i2	58	18	the	the	DT
cord-269353-wgeuh1i2	58	19	International	International	NNP
cord-269353-wgeuh1i2	58	20	Committee	Committee	NNP
cord-269353-wgeuh1i2	58	21	on	on	IN
cord-269353-wgeuh1i2	58	22	Taxonomy	Taxonomy	NNP
cord-269353-wgeuh1i2	58	23	of	of	IN
cord-269353-wgeuh1i2	58	24	Viruses	Viruses	NNPS
cord-269353-wgeuh1i2	59	1	(	(	-LRB-
cord-269353-wgeuh1i2	59	2	ViralZone	ViralZone	NNP
cord-269353-wgeuh1i2	59	3	Database	Database	NNP
cord-269353-wgeuh1i2	59	4	:	:	:
cord-269353-wgeuh1i2	59	5	http://viralzone.expasy.org/	http://viralzone.expasy.org/	ADD
cord-269353-wgeuh1i2	59	6	)	)	-RRB-
cord-269353-wgeuh1i2	59	7	.	.	.
cord-269353-wgeuh1i2	60	1	Accession	accession	NN
cord-269353-wgeuh1i2	60	2	numbers	number	NNS
cord-269353-wgeuh1i2	60	3	and	and	CC
cord-269353-wgeuh1i2	60	4	other	other	JJ
cord-269353-wgeuh1i2	60	5	detailed	detailed	JJ
cord-269353-wgeuh1i2	60	6	information	information	NN
cord-269353-wgeuh1i2	60	7	of	of	IN
cord-269353-wgeuh1i2	60	8	these	these	DT
cord-269353-wgeuh1i2	60	9	viruses	virus	NNS
cord-269353-wgeuh1i2	60	10	,	,	,
cord-269353-wgeuh1i2	60	11	such	such	JJ
cord-269353-wgeuh1i2	60	12	as	as	IN
cord-269353-wgeuh1i2	60	13	strain	strain	NN
cord-269353-wgeuh1i2	60	14	names	name	NNS
cord-269353-wgeuh1i2	60	15	,	,	,
cord-269353-wgeuh1i2	60	16	isolate	isolate	VB
cord-269353-wgeuh1i2	60	17	hosts	host	NNS
cord-269353-wgeuh1i2	60	18	and	and	CC
cord-269353-wgeuh1i2	60	19	host	host	NN
cord-269353-wgeuh1i2	60	20	ranges	range	NNS
cord-269353-wgeuh1i2	60	21	were	be	VBD
cord-269353-wgeuh1i2	60	22	also	also	RB
cord-269353-wgeuh1i2	60	23	retrieved	retrieve	VBN
cord-269353-wgeuh1i2	60	24	(	(	-LRB-
cord-269353-wgeuh1i2	60	25	Supplementary	Supplementary	NNP
cord-269353-wgeuh1i2	60	26	Table	Table	NNP
cord-269353-wgeuh1i2	60	27	1	1	CD
cord-269353-wgeuh1i2	60	28	)	)	-RRB-
cord-269353-wgeuh1i2	60	29	.	.	.
cord-269353-wgeuh1i2	61	1	Estimates	estimate	NNS
cord-269353-wgeuh1i2	61	2	of	of	IN
cord-269353-wgeuh1i2	61	3	codon	codon	NN
cord-269353-wgeuh1i2	61	4	usage	usage	NN
cord-269353-wgeuh1i2	61	5	,	,	,
cord-269353-wgeuh1i2	61	6	the	the	DT
cord-269353-wgeuh1i2	61	7	relative	relative	JJ
cord-269353-wgeuh1i2	61	8	synonymous	synonymous	JJ
cord-269353-wgeuh1i2	61	9	codon	codon	NN
cord-269353-wgeuh1i2	61	10	usage	usage	NN
cord-269353-wgeuh1i2	61	11	(	(	-LRB-
cord-269353-wgeuh1i2	61	12	RSCU	RSCU	NNP
cord-269353-wgeuh1i2	61	13	)	)	-RRB-
cord-269353-wgeuh1i2	62	1	(	(	-LRB-
cord-269353-wgeuh1i2	62	2	Sharp	Sharp	NNP
cord-269353-wgeuh1i2	62	3	and	and	CC
cord-269353-wgeuh1i2	62	4	Li	Li	NNP
cord-269353-wgeuh1i2	62	5	1986	1986	CD
cord-269353-wgeuh1i2	62	6	)	)	-RRB-
cord-269353-wgeuh1i2	62	7	,	,	,
cord-269353-wgeuh1i2	62	8	and	and	CC
cord-269353-wgeuh1i2	62	9	the	the	DT
cord-269353-wgeuh1i2	62	10	effective	effective	JJ
cord-269353-wgeuh1i2	62	11	number	number	NN
cord-269353-wgeuh1i2	62	12	of	of	IN
cord-269353-wgeuh1i2	62	13	codons	codon	NNS
cord-269353-wgeuh1i2	62	14	(	(	-LRB-
cord-269353-wgeuh1i2	62	15	ENC	ENC	NNP
cord-269353-wgeuh1i2	62	16	)	)	-RRB-
cord-269353-wgeuh1i2	62	17	(	(	-LRB-
cord-269353-wgeuh1i2	62	18	Wright	Wright	NNP
cord-269353-wgeuh1i2	62	19	1990	1990	CD
cord-269353-wgeuh1i2	62	20	)	)	-RRB-
cord-269353-wgeuh1i2	62	21	,	,	,
cord-269353-wgeuh1i2	62	22	were	be	VBD
cord-269353-wgeuh1i2	62	23	calculated	calculate	VBN
cord-269353-wgeuh1i2	62	24	using	use	VBG
cord-269353-wgeuh1i2	62	25	CodonW	codonw	NN
cord-269353-wgeuh1i2	62	26	(	(	-LRB-
cord-269353-wgeuh1i2	62	27	available	available	JJ
cord-269353-wgeuh1i2	62	28	at	at	IN
cord-269353-wgeuh1i2	62	29	http://	http://	NNP
cord-269353-wgeuh1i2	62	30	sourceforge.net/projects/codonw	sourceforge.net/projects/codonw	NNP
cord-269353-wgeuh1i2	62	31	)	)	-RRB-
cord-269353-wgeuh1i2	62	32	.	.	.
cord-269353-wgeuh1i2	63	1	In	in	IN
cord-269353-wgeuh1i2	63	2	this	this	DT
cord-269353-wgeuh1i2	63	3	study	study	NN
cord-269353-wgeuh1i2	63	4	,	,	,
cord-269353-wgeuh1i2	63	5	Aedes	Aedes	NNP
cord-269353-wgeuh1i2	63	6	,	,	,
cord-269353-wgeuh1i2	63	7	Culex	Culex	NNP
cord-269353-wgeuh1i2	63	8	and	and	CC
cord-269353-wgeuh1i2	63	9	Ixodes	Ixodes	NNP
cord-269353-wgeuh1i2	63	10	represented	represent	VBD
cord-269353-wgeuh1i2	63	11	the	the	DT
cord-269353-wgeuh1i2	63	12	main	main	JJ
cord-269353-wgeuh1i2	63	13	arthropod	arthropod	JJ
cord-269353-wgeuh1i2	63	14	hosts	host	NNS
cord-269353-wgeuh1i2	63	15	,	,	,
cord-269353-wgeuh1i2	63	16	and	and	CC
cord-269353-wgeuh1i2	63	17	Gallus	Gallus	NNP
cord-269353-wgeuh1i2	63	18	,	,	,
cord-269353-wgeuh1i2	63	19	Homo	Homo	NNP
cord-269353-wgeuh1i2	63	20	and	and	CC
cord-269353-wgeuh1i2	63	21	Mus	Mus	NNP
cord-269353-wgeuh1i2	63	22	the	the	DT
cord-269353-wgeuh1i2	63	23	three	three	CD
cord-269353-wgeuh1i2	63	24	major	major	JJ
cord-269353-wgeuh1i2	63	25	groups	group	NNS
cord-269353-wgeuh1i2	63	26	of	of	IN
cord-269353-wgeuh1i2	63	27	vertebrates	vertebrate	NNS
cord-269353-wgeuh1i2	63	28	.	.	.
cord-269353-wgeuh1i2	64	1	Coding	coding	NN
cord-269353-wgeuh1i2	64	2	sequences	sequence	NNS
cord-269353-wgeuh1i2	64	3	of	of	IN
cord-269353-wgeuh1i2	64	4	the	the	DT
cord-269353-wgeuh1i2	64	5	hosts	host	NNS
cord-269353-wgeuh1i2	64	6	were	be	VBD
cord-269353-wgeuh1i2	64	7	obtained	obtain	VBN
cord-269353-wgeuh1i2	64	8	from	from	IN
cord-269353-wgeuh1i2	64	9	the	the	DT
cord-269353-wgeuh1i2	64	10	Ensembl	Ensembl	NNP
cord-269353-wgeuh1i2	64	11	database	database	NN
cord-269353-wgeuh1i2	64	12	(	(	-LRB-
cord-269353-wgeuh1i2	64	13	available	available	JJ
cord-269353-wgeuh1i2	64	14	at	at	IN
cord-269353-wgeuh1i2	64	15	:	:	:
cord-269353-wgeuh1i2	64	16	http://www	http://www	ADD
cord-269353-wgeuh1i2	64	17	.	.	.
cord-269353-wgeuh1i2	65	1	ensembl.org	ensembl.org	LS
cord-269353-wgeuh1i2	65	2	)	)	-RRB-
cord-269353-wgeuh1i2	66	1	(	(	-LRB-
cord-269353-wgeuh1i2	66	2	Yates	Yates	NNP
cord-269353-wgeuh1i2	66	3	et	et	NNP
cord-269353-wgeuh1i2	66	4	al	al	NNP
cord-269353-wgeuh1i2	66	5	.	.	.
cord-269353-wgeuh1i2	66	6	2016	2016	CD
cord-269353-wgeuh1i2	66	7	)	)	-RRB-
cord-269353-wgeuh1i2	66	8	.	.	.
cord-269353-wgeuh1i2	67	1	Copy	copy	JJ
cord-269353-wgeuh1i2	67	2	number	number	NN
cord-269353-wgeuh1i2	67	3	of	of	IN
cord-269353-wgeuh1i2	67	4	tRNAs	trna	NNS
cord-269353-wgeuh1i2	67	5	for	for	IN
cord-269353-wgeuh1i2	67	6	transmission	transmission	NN
cord-269353-wgeuh1i2	67	7	vectors	vector	NNS
cord-269353-wgeuh1i2	67	8	and	and	CC
cord-269353-wgeuh1i2	67	9	hosts	host	NNS
cord-269353-wgeuh1i2	67	10	were	be	VBD
cord-269353-wgeuh1i2	67	11	obtained	obtain	VBN
cord-269353-wgeuh1i2	67	12	from	from	IN
cord-269353-wgeuh1i2	67	13	GtRNAdb	GtRNAdb	NNP
cord-269353-wgeuh1i2	67	14	(	(	-LRB-
cord-269353-wgeuh1i2	67	15	http://gtrnadb	http://gtrnadb	UH
cord-269353-wgeuh1i2	67	16	.	.	.
cord-269353-wgeuh1i2	68	1	ucsc.edu/	ucsc.edu/	NNP
cord-269353-wgeuh1i2	68	2	)	)	-RRB-
cord-269353-wgeuh1i2	68	3	.	.	.
cord-269353-wgeuh1i2	69	1	Optimizing	optimize	VBG
cord-269353-wgeuh1i2	69	2	codon	codon	NN
cord-269353-wgeuh1i2	69	3	usage	usage	NN
cord-269353-wgeuh1i2	69	4	of	of	IN
cord-269353-wgeuh1i2	69	5	viruses	virus	NNS
cord-269353-wgeuh1i2	69	6	according	accord	VBG
cord-269353-wgeuh1i2	69	7	to	to	IN
cord-269353-wgeuh1i2	69	8	that	that	DT
cord-269353-wgeuh1i2	69	9	of	of	IN
cord-269353-wgeuh1i2	69	10	highly	highly	RB
cord-269353-wgeuh1i2	69	11	expressed	express	VBN
cord-269353-wgeuh1i2	69	12	host	host	NN
cord-269353-wgeuh1i2	69	13	genes	gene	NNS
cord-269353-wgeuh1i2	69	14	has	have	VBZ
cord-269353-wgeuh1i2	69	15	been	be	VBN
cord-269353-wgeuh1i2	69	16	proved	prove	VBN
cord-269353-wgeuh1i2	69	17	to	to	TO
cord-269353-wgeuh1i2	69	18	increase	increase	VB
cord-269353-wgeuh1i2	69	19	the	the	DT
cord-269353-wgeuh1i2	69	20	production	production	NN
cord-269353-wgeuh1i2	69	21	of	of	IN
cord-269353-wgeuh1i2	69	22	viral	viral	JJ
cord-269353-wgeuh1i2	69	23	proteins	protein	NNS
cord-269353-wgeuh1i2	69	24	(	(	-LRB-
cord-269353-wgeuh1i2	69	25	Chithambaram	Chithambaram	NNP
cord-269353-wgeuh1i2	69	26	et	et	NNP
cord-269353-wgeuh1i2	69	27	al	al	NNP
cord-269353-wgeuh1i2	69	28	.	.	.
cord-269353-wgeuh1i2	70	1	2014	2014	CD
cord-269353-wgeuh1i2	70	2	;	;	:
cord-269353-wgeuh1i2	70	3	Ngumbela	Ngumbela	NNP
cord-269353-wgeuh1i2	70	4	et	et	NNP
cord-269353-wgeuh1i2	70	5	al	al	NNP
cord-269353-wgeuh1i2	70	6	.	.	NNP
cord-269353-wgeuh1i2	70	7	2008	2008	CD
cord-269353-wgeuh1i2	70	8	)	)	-RRB-
cord-269353-wgeuh1i2	70	9	or	or	CC
cord-269353-wgeuh1i2	70	10	transgenic	transgenic	JJ
cord-269353-wgeuh1i2	70	11	genes	gene	NNS
cord-269353-wgeuh1i2	71	1	(	(	-LRB-
cord-269353-wgeuh1i2	71	2	Koresawa	Koresawa	NNP
cord-269353-wgeuh1i2	71	3	et	et	NNP
cord-269353-wgeuh1i2	71	4	al	al	NNP
cord-269353-wgeuh1i2	71	5	.	.	.
cord-269353-wgeuh1i2	71	6	2000	2000	CD
cord-269353-wgeuh1i2	71	7	)	)	-RRB-
cord-269353-wgeuh1i2	71	8	.	.	.
cord-269353-wgeuh1i2	72	1	The	the	DT
cord-269353-wgeuh1i2	72	2	degree	degree	NN
cord-269353-wgeuh1i2	72	3	of	of	IN
cord-269353-wgeuh1i2	72	4	similarity	similarity	NN
cord-269353-wgeuh1i2	72	5	for	for	IN
cord-269353-wgeuh1i2	72	6	overall	overall	JJ
cord-269353-wgeuh1i2	72	7	codon	codon	NN
cord-269353-wgeuh1i2	72	8	usage	usage	NN
cord-269353-wgeuh1i2	72	9	between	between	IN
cord-269353-wgeuh1i2	72	10	viruses	virus	NNS
cord-269353-wgeuh1i2	72	11	and	and	CC
cord-269353-wgeuh1i2	72	12	their	-PRON-	PRP$
cord-269353-wgeuh1i2	72	13	hosts	host	NNS
cord-269353-wgeuh1i2	72	14	'	'	POS
cord-269353-wgeuh1i2	72	15	tRNA	trna	NN
cord-269353-wgeuh1i2	72	16	pools	pool	NNS
cord-269353-wgeuh1i2	72	17	was	be	VBD
cord-269353-wgeuh1i2	72	18	estimated	estimate	VBN
cord-269353-wgeuh1i2	72	19	with	with	IN
cord-269353-wgeuh1i2	72	20	a	a	DT
cord-269353-wgeuh1i2	72	21	parameter	parameter	NN
cord-269353-wgeuh1i2	72	22	based	base	VBN
cord-269353-wgeuh1i2	72	23	on	on	IN
cord-269353-wgeuh1i2	72	24	optimized	optimize	VBN
cord-269353-wgeuh1i2	72	25	codon	codon	NN
cord-269353-wgeuh1i2	72	26	usage	usage	NN
cord-269353-wgeuh1i2	72	27	and	and	CC
cord-269353-wgeuh1i2	72	28	the	the	DT
cord-269353-wgeuh1i2	72	29	extent	extent	NN
cord-269353-wgeuh1i2	72	30	of	of	IN
cord-269353-wgeuh1i2	72	31	matching	match	VBG
cord-269353-wgeuh1i2	72	32	between	between	IN
cord-269353-wgeuh1i2	72	33	viral	viral	JJ
cord-269353-wgeuh1i2	72	34	ORF	ORF	NNP
cord-269353-wgeuh1i2	72	35	's	's	POS
cord-269353-wgeuh1i2	72	36	codon	codon	NN
cord-269353-wgeuh1i2	72	37	usage	usage	NN
cord-269353-wgeuh1i2	72	38	bias	bias	NN
cord-269353-wgeuh1i2	72	39	and	and	CC
cord-269353-wgeuh1i2	72	40	their	-PRON-	PRP$
cord-269353-wgeuh1i2	72	41	hosts	host	NNS
cord-269353-wgeuh1i2	72	42	'	'	POS
cord-269353-wgeuh1i2	72	43	tRNA	trna	NN
cord-269353-wgeuh1i2	72	44	pools	pool	NNS
cord-269353-wgeuh1i2	72	45	.	.	.
cord-269353-wgeuh1i2	73	1	ORFs	ORFs	NNP
cord-269353-wgeuh1i2	73	2	were	be	VBD
cord-269353-wgeuh1i2	73	3	optimized	optimize	VBN
cord-269353-wgeuh1i2	73	4	on	on	IN
cord-269353-wgeuh1i2	73	5	the	the	DT
cord-269353-wgeuh1i2	73	6	basis	basis	NN
cord-269353-wgeuh1i2	73	7	of	of	IN
cord-269353-wgeuh1i2	73	8	tRNA	tRNA	NNP
cord-269353-wgeuh1i2	73	9	copy	copy	NN
cord-269353-wgeuh1i2	73	10	number	number	NN
cord-269353-wgeuh1i2	73	11	characteristics	characteristic	NNS
cord-269353-wgeuh1i2	73	12	of	of	IN
cord-269353-wgeuh1i2	73	13	their	-PRON-	PRP$
cord-269353-wgeuh1i2	73	14	hosts	host	NNS
cord-269353-wgeuh1i2	73	15	'	'	POS
cord-269353-wgeuh1i2	73	16	expression	expression	NN
cord-269353-wgeuh1i2	73	17	system	system	NN
cord-269353-wgeuh1i2	73	18	.	.	.
cord-269353-wgeuh1i2	74	1	Online	online	JJ
cord-269353-wgeuh1i2	74	2	optimization	optimization	NN
cord-269353-wgeuh1i2	74	3	software	software	NN
cord-269353-wgeuh1i2	74	4	(	(	-LRB-
cord-269353-wgeuh1i2	74	5	http://genomes.urv.es/OPTIMIZER/	http://genomes.urv.es/optimizer/	NN
cord-269353-wgeuh1i2	74	6	)	)	-RRB-
cord-269353-wgeuh1i2	75	1	(	(	-LRB-
cord-269353-wgeuh1i2	75	2	Puigbo	Puigbo	NNP
cord-269353-wgeuh1i2	75	3	et	et	NNP
cord-269353-wgeuh1i2	75	4	al	al	NNP
cord-269353-wgeuh1i2	75	5	.	.	NNP
cord-269353-wgeuh1i2	75	6	2007	2007	CD
cord-269353-wgeuh1i2	75	7	)	)	-RRB-
cord-269353-wgeuh1i2	75	8	was	be	VBD
cord-269353-wgeuh1i2	75	9	utilized	utilize	VBN
cord-269353-wgeuh1i2	75	10	.	.	.
cord-269353-wgeuh1i2	76	1	The	the	DT
cord-269353-wgeuh1i2	76	2	matching	matching	NN
cord-269353-wgeuh1i2	76	3	degree	degree	NN
cord-269353-wgeuh1i2	76	4	(	(	-LRB-
cord-269353-wgeuh1i2	76	5	MD	MD	NNP
cord-269353-wgeuh1i2	76	6	)	)	-RRB-
cord-269353-wgeuh1i2	76	7	was	be	VBD
cord-269353-wgeuh1i2	76	8	calculated	calculate	VBN
cord-269353-wgeuh1i2	76	9	as	as	IN
cord-269353-wgeuh1i2	76	10	follows	follow	VBZ
cord-269353-wgeuh1i2	76	11	:	:	:
cord-269353-wgeuh1i2	76	12	where	where	WRB
cord-269353-wgeuh1i2	76	13	M	M	NNP
cord-269353-wgeuh1i2	76	14	was	be	VBD
cord-269353-wgeuh1i2	76	15	defined	define	VBN
cord-269353-wgeuh1i2	76	16	as	as	IN
cord-269353-wgeuh1i2	76	17	the	the	DT
cord-269353-wgeuh1i2	76	18	number	number	NN
cord-269353-wgeuh1i2	76	19	of	of	IN
cord-269353-wgeuh1i2	76	20	the	the	DT
cord-269353-wgeuh1i2	76	21	different	different	JJ
cord-269353-wgeuh1i2	76	22	bases	basis	NNS
cord-269353-wgeuh1i2	76	23	before	before	IN
cord-269353-wgeuh1i2	76	24	and	and	CC
cord-269353-wgeuh1i2	76	25	after	after	IN
cord-269353-wgeuh1i2	76	26	optimized	optimize	VBN
cord-269353-wgeuh1i2	76	27	sequence	sequence	NN
cord-269353-wgeuh1i2	76	28	,	,	,
cord-269353-wgeuh1i2	76	29	and	and	CC
cord-269353-wgeuh1i2	76	30	N	N	NNP
cord-269353-wgeuh1i2	76	31	was	be	VBD
cord-269353-wgeuh1i2	76	32	the	the	DT
cord-269353-wgeuh1i2	76	33	total	total	JJ
cord-269353-wgeuh1i2	76	34	length	length	NN
cord-269353-wgeuh1i2	76	35	of	of	IN
cord-269353-wgeuh1i2	76	36	open	open	JJ
cord-269353-wgeuh1i2	76	37	reading	reading	NN
cord-269353-wgeuh1i2	76	38	frame	frame	NN
cord-269353-wgeuh1i2	76	39	.	.	.
cord-269353-wgeuh1i2	77	1	This	this	DT
cord-269353-wgeuh1i2	77	2	value	value	NN
cord-269353-wgeuh1i2	77	3	could	could	MD
cord-269353-wgeuh1i2	77	4	have	have	VB
cord-269353-wgeuh1i2	77	5	ranged	range	VBN
cord-269353-wgeuh1i2	77	6	from	from	IN
cord-269353-wgeuh1i2	77	7	zero	zero	CD
cord-269353-wgeuh1i2	77	8	to	to	IN
cord-269353-wgeuh1i2	77	9	1	1	CD
cord-269353-wgeuh1i2	77	10	.	.	.
cord-269353-wgeuh1i2	78	1	To	to	TO
cord-269353-wgeuh1i2	78	2	better	well	RBR
cord-269353-wgeuh1i2	78	3	quantify	quantify	VB
cord-269353-wgeuh1i2	78	4	the	the	DT
cord-269353-wgeuh1i2	78	5	effect	effect	NN
cord-269353-wgeuh1i2	78	6	of	of	IN
cord-269353-wgeuh1i2	78	7	the	the	DT
cord-269353-wgeuh1i2	78	8	overall	overall	JJ
cord-269353-wgeuh1i2	78	9	codon	codon	NN
cord-269353-wgeuh1i2	78	10	usage	usage	NN
cord-269353-wgeuh1i2	78	11	of	of	IN
cord-269353-wgeuh1i2	78	12	the	the	DT
cord-269353-wgeuh1i2	78	13	host	host	NN
cord-269353-wgeuh1i2	78	14	on	on	IN
cord-269353-wgeuh1i2	78	15	the	the	DT
cord-269353-wgeuh1i2	78	16	formation	formation	NN
cord-269353-wgeuh1i2	78	17	of	of	IN
cord-269353-wgeuh1i2	78	18	the	the	DT
cord-269353-wgeuh1i2	78	19	overall	overall	JJ
cord-269353-wgeuh1i2	78	20	codon	codon	NN
cord-269353-wgeuh1i2	78	21	usage	usage	NN
cord-269353-wgeuh1i2	78	22	of	of	IN
cord-269353-wgeuh1i2	78	23	the	the	DT
cord-269353-wgeuh1i2	78	24	virus	virus	NN
cord-269353-wgeuh1i2	78	25	,	,	,
cord-269353-wgeuh1i2	78	26	the	the	DT
cord-269353-wgeuh1i2	78	27	similarity	similarity	NN
cord-269353-wgeuh1i2	78	28	index	index	NN
cord-269353-wgeuh1i2	78	29	D(A	d(a	NN
cord-269353-wgeuh1i2	78	30	,	,	,
cord-269353-wgeuh1i2	78	31	B	B	NNP
cord-269353-wgeuh1i2	78	32	)	)	-RRB-
cord-269353-wgeuh1i2	78	33	reported	report	VBN
cord-269353-wgeuh1i2	78	34	by	by	IN
cord-269353-wgeuh1i2	78	35	the	the	DT
cord-269353-wgeuh1i2	78	36	previous	previous	JJ
cord-269353-wgeuh1i2	78	37	study	study	NN
cord-269353-wgeuh1i2	78	38	was	be	VBD
cord-269353-wgeuh1i2	78	39	introduced	introduce	VBN
cord-269353-wgeuh1i2	78	40	into	into	IN
cord-269353-wgeuh1i2	78	41	our	-PRON-	PRP$
cord-269353-wgeuh1i2	78	42	work	work	NN
cord-269353-wgeuh1i2	79	1	(	(	-LRB-
cord-269353-wgeuh1i2	79	2	Zhou	Zhou	NNP
cord-269353-wgeuh1i2	79	3	et	et	NNP
cord-269353-wgeuh1i2	79	4	al	al	NNP
cord-269353-wgeuh1i2	79	5	.	.	NNP
cord-269353-wgeuh1i2	79	6	2013	2013	CD
cord-269353-wgeuh1i2	79	7	)	)	-RRB-
cord-269353-wgeuh1i2	79	8	.	.	.
cord-269353-wgeuh1i2	80	1	The	the	DT
cord-269353-wgeuh1i2	80	2	D(A	d(a	NN
cord-269353-wgeuh1i2	80	3	,	,	,
cord-269353-wgeuh1i2	80	4	B	B	NNP
cord-269353-wgeuh1i2	80	5	)	)	-RRB-
cord-269353-wgeuh1i2	80	6	represented	represent	VBD
cord-269353-wgeuh1i2	80	7	the	the	DT
cord-269353-wgeuh1i2	80	8	potential	potential	JJ
cord-269353-wgeuh1i2	80	9	effect	effect	NN
cord-269353-wgeuh1i2	80	10	of	of	IN
cord-269353-wgeuh1i2	80	11	the	the	DT
cord-269353-wgeuh1i2	80	12	overall	overall	JJ
cord-269353-wgeuh1i2	80	13	codon	codon	NN
cord-269353-wgeuh1i2	80	14	usage	usage	NN
cord-269353-wgeuh1i2	80	15	of	of	IN
cord-269353-wgeuh1i2	80	16	the	the	DT
cord-269353-wgeuh1i2	80	17	host	host	NN
cord-269353-wgeuh1i2	80	18	on	on	IN
cord-269353-wgeuh1i2	80	19	that	that	DT
cord-269353-wgeuh1i2	80	20	of	of	IN
cord-269353-wgeuh1i2	80	21	virus	virus	NN
cord-269353-wgeuh1i2	80	22	.	.	.
cord-269353-wgeuh1i2	81	1	This	this	DT
cord-269353-wgeuh1i2	81	2	value	value	NN
cord-269353-wgeuh1i2	81	3	potentially	potentially	RB
cord-269353-wgeuh1i2	81	4	ranged	range	VBD
cord-269353-wgeuh1i2	81	5	from	from	IN
cord-269353-wgeuh1i2	81	6	zero	zero	CD
cord-269353-wgeuh1i2	81	7	to	to	IN
cord-269353-wgeuh1i2	81	8	1.0	1.0	CD
cord-269353-wgeuh1i2	81	9	.	.	.
cord-269353-wgeuh1i2	82	1	3.1	3.1	LS
cord-269353-wgeuh1i2	82	2	.	.	.
cord-269353-wgeuh1i2	83	1	The	the	DT
cord-269353-wgeuh1i2	83	2	matching	matching	NN
cord-269353-wgeuh1i2	83	3	degree	degree	NN
cord-269353-wgeuh1i2	83	4	of	of	IN
cord-269353-wgeuh1i2	83	5	+	+	SYM
cord-269353-wgeuh1i2	83	6	ssRNA	ssrna	NN
cord-269353-wgeuh1i2	83	7	viruses	virus	NNS
cord-269353-wgeuh1i2	83	8	to	to	IN
cord-269353-wgeuh1i2	83	9	their	-PRON-	PRP$
cord-269353-wgeuh1i2	83	10	hosts	host	NNS
cord-269353-wgeuh1i2	83	11	'	'	POS
cord-269353-wgeuh1i2	83	12	tRNA	tRNA	NNP
cord-269353-wgeuh1i2	83	13	pools	pool	NNS
cord-269353-wgeuh1i2	83	14	MD	MD	NNP
cord-269353-wgeuh1i2	83	15	values	value	NNS
cord-269353-wgeuh1i2	83	16	were	be	VBD
cord-269353-wgeuh1i2	83	17	calculated	calculate	VBN
cord-269353-wgeuh1i2	83	18	for	for	IN
cord-269353-wgeuh1i2	83	19	viral	viral	JJ
cord-269353-wgeuh1i2	83	20	ORFs	ORFs	NNP
cord-269353-wgeuh1i2	83	21	.	.	.
cord-269353-wgeuh1i2	84	1	Unfortunately	unfortunately	RB
cord-269353-wgeuh1i2	84	2	,	,	,
cord-269353-wgeuh1i2	84	3	some	some	DT
cord-269353-wgeuh1i2	84	4	viruses	virus	NNS
cord-269353-wgeuh1i2	84	5	lacked	lack	VBD
cord-269353-wgeuh1i2	84	6	data	datum	NNS
cord-269353-wgeuh1i2	84	7	of	of	IN
cord-269353-wgeuh1i2	84	8	tRNA	tRNA	NNP
cord-269353-wgeuh1i2	84	9	copy	copy	NN
cord-269353-wgeuh1i2	84	10	numbers	number	NNS
cord-269353-wgeuh1i2	84	11	,	,	,
cord-269353-wgeuh1i2	84	12	and	and	CC
cord-269353-wgeuh1i2	84	13	coding	code	VBG
cord-269353-wgeuh1i2	84	14	sequence	sequence	NN
cord-269353-wgeuh1i2	84	15	of	of	IN
cord-269353-wgeuh1i2	84	16	their	-PRON-	PRP$
cord-269353-wgeuh1i2	84	17	hosts	host	NNS
cord-269353-wgeuh1i2	84	18	.	.	.
cord-269353-wgeuh1i2	85	1	Therefore	therefore	RB
cord-269353-wgeuh1i2	85	2	,	,	,
cord-269353-wgeuh1i2	85	3	only	only	RB
cord-269353-wgeuh1i2	85	4	255	255	CD
cord-269353-wgeuh1i2	85	5	viruses	virus	NNS
cord-269353-wgeuh1i2	85	6	(	(	-LRB-
cord-269353-wgeuh1i2	85	7	+	+	CC
cord-269353-wgeuh1i2	85	8	ssRNA	ssrna	NN
cord-269353-wgeuh1i2	85	9	)	)	-RRB-
cord-269353-wgeuh1i2	85	10	were	be	VBD
cord-269353-wgeuh1i2	85	11	used	use	VBN
cord-269353-wgeuh1i2	85	12	in	in	IN
cord-269353-wgeuh1i2	85	13	this	this	DT
cord-269353-wgeuh1i2	85	14	analysis	analysis	NN
cord-269353-wgeuh1i2	85	15	.	.	.
cord-269353-wgeuh1i2	86	1	The	the	DT
cord-269353-wgeuh1i2	86	2	101	101	CD
cord-269353-wgeuh1i2	86	3	strains	strain	NNS
cord-269353-wgeuh1i2	86	4	of	of	IN
cord-269353-wgeuh1i2	86	5	arboviruses	arbovirus	NNS
cord-269353-wgeuh1i2	86	6	that	that	WDT
cord-269353-wgeuh1i2	86	7	belonged	belong	VBD
cord-269353-wgeuh1i2	86	8	to	to	IN
cord-269353-wgeuh1i2	86	9	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	86	10	were	be	VBD
cord-269353-wgeuh1i2	86	11	optimized	optimize	VBN
cord-269353-wgeuh1i2	86	12	according	accord	VBG
cord-269353-wgeuh1i2	86	13	to	to	IN
cord-269353-wgeuh1i2	86	14	their	-PRON-	PRP$
cord-269353-wgeuh1i2	86	15	hosts	host	NNS
cord-269353-wgeuh1i2	86	16	'	'	POS
cord-269353-wgeuh1i2	86	17	tRNA	tRNA	NNP
cord-269353-wgeuh1i2	86	18	pool	pool	NN
cord-269353-wgeuh1i2	86	19	expression	expression	NN
cord-269353-wgeuh1i2	86	20	systems	system	NNS
cord-269353-wgeuh1i2	86	21	(	(	-LRB-
cord-269353-wgeuh1i2	86	22	host	host	NN
cord-269353-wgeuh1i2	86	23	:	:	:
cord-269353-wgeuh1i2	86	24	arthropods	arthropod	NNS
cord-269353-wgeuh1i2	86	25	,	,	,
cord-269353-wgeuh1i2	86	26	mammals	mammal	NNS
cord-269353-wgeuh1i2	86	27	,	,	,
cord-269353-wgeuh1i2	86	28	Gallus	Gallus	NNP
cord-269353-wgeuh1i2	86	29	gallus	gallus	NN
cord-269353-wgeuh1i2	86	30	)	)	-RRB-
cord-269353-wgeuh1i2	86	31	.	.	.
cord-269353-wgeuh1i2	87	1	MD	MD	NNP
cord-269353-wgeuh1i2	87	2	values	value	NNS
cord-269353-wgeuh1i2	87	3	(	(	-LRB-
cord-269353-wgeuh1i2	87	4	mean	mean	VB
cord-269353-wgeuh1i2	87	5	±	±	NNP
cord-269353-wgeuh1i2	87	6	SD	SD	NNP
cord-269353-wgeuh1i2	87	7	)	)	-RRB-
cord-269353-wgeuh1i2	87	8	were	be	VBD
cord-269353-wgeuh1i2	87	9	0.7388	0.7388	CD
cord-269353-wgeuh1i2	87	10	±	±	CD
cord-269353-wgeuh1i2	87	11	0.0121	0.0121	CD
cord-269353-wgeuh1i2	87	12	,	,	,
cord-269353-wgeuh1i2	87	13	0.7383	0.7383	CD
cord-269353-wgeuh1i2	87	14	±	±	CD
cord-269353-wgeuh1i2	87	15	0.0083	0.0083	CD
cord-269353-wgeuh1i2	87	16	,	,	,
cord-269353-wgeuh1i2	87	17	and	and	CC
cord-269353-wgeuh1i2	87	18	0.7427	0.7427	CD
cord-269353-wgeuh1i2	87	19	±	±	CD
cord-269353-wgeuh1i2	87	20	0.0045	0.0045	CD
cord-269353-wgeuh1i2	87	21	in	in	IN
cord-269353-wgeuh1i2	87	22	the	the	DT
cord-269353-wgeuh1i2	87	23	three	three	CD
cord-269353-wgeuh1i2	87	24	hosts	host	NNS
cord-269353-wgeuh1i2	87	25	,	,	,
cord-269353-wgeuh1i2	87	26	respectively	respectively	RB
cord-269353-wgeuh1i2	87	27	(	(	-LRB-
cord-269353-wgeuh1i2	87	28	Supplementary	supplementary	JJ
cord-269353-wgeuh1i2	87	29	Table	Table	NNP
cord-269353-wgeuh1i2	87	30	2	2	CD
cord-269353-wgeuh1i2	87	31	)	)	-RRB-
cord-269353-wgeuh1i2	87	32	.	.	.
cord-269353-wgeuh1i2	88	1	The	the	DT
cord-269353-wgeuh1i2	88	2	MD	MD	NNP
cord-269353-wgeuh1i2	88	3	values	value	NNS
cord-269353-wgeuh1i2	88	4	of	of	IN
cord-269353-wgeuh1i2	88	5	154	154	CD
cord-269353-wgeuh1i2	88	6	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	88	7	strains	strain	NNS
cord-269353-wgeuh1i2	88	8	had	have	VBD
cord-269353-wgeuh1i2	88	9	a	a	DT
cord-269353-wgeuh1i2	88	10	mean	mean	NN
cord-269353-wgeuh1i2	88	11	of	of	IN
cord-269353-wgeuh1i2	88	12	0.7617	0.7617	CD
cord-269353-wgeuh1i2	88	13	±	±	CD
cord-269353-wgeuh1i2	88	14	0.0168	0.0168	CD
cord-269353-wgeuh1i2	88	15	(	(	-LRB-
cord-269353-wgeuh1i2	88	16	Supplementary	supplementary	JJ
cord-269353-wgeuh1i2	88	17	 	 	_SP
cord-269353-wgeuh1i2	88	18	Table	Table	NNP
cord-269353-wgeuh1i2	88	19	3	3	CD
cord-269353-wgeuh1i2	88	20	)	)	-RRB-
cord-269353-wgeuh1i2	88	21	.	.	.
cord-269353-wgeuh1i2	89	1	Wilcoxon	Wilcoxon	NNP
cord-269353-wgeuh1i2	89	2	&	&	CC
cord-269353-wgeuh1i2	89	3	Mann	Mann	NNP
cord-269353-wgeuh1i2	89	4	-	-	HYPH
cord-269353-wgeuh1i2	89	5	Whitney	Whitney	NNP
cord-269353-wgeuh1i2	89	6	U	U	NNP
cord-269353-wgeuh1i2	89	7	test	test	NN
cord-269353-wgeuh1i2	89	8	obtained	obtain	VBD
cord-269353-wgeuh1i2	89	9	statistically	statistically	RB
cord-269353-wgeuh1i2	89	10	significant	significant	JJ
cord-269353-wgeuh1i2	89	11	higher	high	JJR
cord-269353-wgeuh1i2	89	12	MD	MD	NNP
cord-269353-wgeuh1i2	89	13	values	value	NNS
cord-269353-wgeuh1i2	89	14	in	in	IN
cord-269353-wgeuh1i2	89	15	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	89	16	than	than	IN
cord-269353-wgeuh1i2	89	17	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	89	18	(	(	-LRB-
cord-269353-wgeuh1i2	89	19	Z	z	NN
cord-269353-wgeuh1i2	89	20	=	=	SYM
cord-269353-wgeuh1i2	89	21	−9.99	−9.99	NNP
cord-269353-wgeuh1i2	89	22	,	,	,
cord-269353-wgeuh1i2	89	23	p	p	NN
cord-269353-wgeuh1i2	89	24	<	<	XX
cord-269353-wgeuh1i2	89	25	0.001	0.001	XX
cord-269353-wgeuh1i2	89	26	;	;	:
cord-269353-wgeuh1i2	89	27	Z	z	NN
cord-269353-wgeuh1i2	89	28	=	=	SYM
cord-269353-wgeuh1i2	89	29	−10.25	−10.25	NNS
cord-269353-wgeuh1i2	89	30	,	,	,
cord-269353-wgeuh1i2	89	31	p	p	NN
cord-269353-wgeuh1i2	89	32	<	<	XX
cord-269353-wgeuh1i2	89	33	0.001	0.001	XX
cord-269353-wgeuh1i2	89	34	;	;	:
cord-269353-wgeuh1i2	89	35	Z	z	NN
cord-269353-wgeuh1i2	89	36	=	=	NFP
cord-269353-wgeuh1i2	90	1	−5.59	−5.59	NNP
cord-269353-wgeuh1i2	90	2	,	,	,
cord-269353-wgeuh1i2	90	3	p	p	NN
cord-269353-wgeuh1i2	90	4	<	<	XX
cord-269353-wgeuh1i2	90	5	0.001	0.001	CD
cord-269353-wgeuh1i2	90	6	,	,	,
cord-269353-wgeuh1i2	90	7	respectively	respectively	RB
cord-269353-wgeuh1i2	90	8	.	.	.
cord-269353-wgeuh1i2	91	1	Fig	Fig	NNP
cord-269353-wgeuh1i2	91	2	.	.	.
cord-269353-wgeuh1i2	91	3	1a	1a	CD
cord-269353-wgeuh1i2	91	4	)	)	-RRB-
cord-269353-wgeuh1i2	91	5	.	.	.
cord-269353-wgeuh1i2	92	1	Among	among	IN
cord-269353-wgeuh1i2	92	2	the	the	DT
cord-269353-wgeuh1i2	92	3	different	different	JJ
cord-269353-wgeuh1i2	92	4	genera	genus	NNS
cord-269353-wgeuh1i2	92	5	of	of	IN
cord-269353-wgeuh1i2	92	6	arbovirus	arbovirus	NN
cord-269353-wgeuh1i2	92	7	(	(	-LRB-
cord-269353-wgeuh1i2	92	8	Fig	Fig	NNP
cord-269353-wgeuh1i2	92	9	.	.	.
cord-269353-wgeuh1i2	92	10	1b	1b	CD
cord-269353-wgeuh1i2	92	11	)	)	-RRB-
cord-269353-wgeuh1i2	92	12	,	,	,
cord-269353-wgeuh1i2	92	13	the	the	DT
cord-269353-wgeuh1i2	92	14	extent	extent	NN
cord-269353-wgeuh1i2	92	15	of	of	IN
cord-269353-wgeuh1i2	92	16	matching	match	VBG
cord-269353-wgeuh1i2	92	17	for	for	IN
cord-269353-wgeuh1i2	92	18	Flavivirus	Flavivirus	NNP
cord-269353-wgeuh1i2	92	19	to	to	IN
cord-269353-wgeuh1i2	92	20	their	-PRON-	PRP$
cord-269353-wgeuh1i2	92	21	hosts	host	NNS
cord-269353-wgeuh1i2	92	22	'	'	POS
cord-269353-wgeuh1i2	92	23	tRNA	trna	NN
cord-269353-wgeuh1i2	92	24	pools	pool	NNS
cord-269353-wgeuh1i2	92	25	was	be	VBD
cord-269353-wgeuh1i2	92	26	higher	high	JJR
cord-269353-wgeuh1i2	92	27	than	than	IN
cord-269353-wgeuh1i2	92	28	that	that	DT
cord-269353-wgeuh1i2	92	29	of	of	IN
cord-269353-wgeuh1i2	92	30	Alphavirus	Alphavirus	NNP
cord-269353-wgeuh1i2	92	31	.	.	.
cord-269353-wgeuh1i2	93	1	In	in	IN
cord-269353-wgeuh1i2	93	2	addition	addition	NN
cord-269353-wgeuh1i2	93	3	,	,	,
cord-269353-wgeuh1i2	93	4	among	among	IN
cord-269353-wgeuh1i2	93	5	the	the	DT
cord-269353-wgeuh1i2	93	6	18	18	CD
cord-269353-wgeuh1i2	93	7	genera	genus	NNS
cord-269353-wgeuh1i2	93	8	of	of	IN
cord-269353-wgeuh1i2	93	9	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	93	10	,	,	,
cord-269353-wgeuh1i2	93	11	the	the	DT
cord-269353-wgeuh1i2	93	12	MD	MD	NNP
cord-269353-wgeuh1i2	93	13	values	value	NNS
cord-269353-wgeuh1i2	93	14	of	of	IN
cord-269353-wgeuh1i2	93	15	Togaviridae	Togaviridae	NNP
cord-269353-wgeuh1i2	93	16	(	(	-LRB-
cord-269353-wgeuh1i2	93	17	rubivirus	rubivirus	NNP
cord-269353-wgeuh1i2	93	18	)	)	-RRB-
cord-269353-wgeuh1i2	93	19	were	be	VBD
cord-269353-wgeuh1i2	93	20	the	the	DT
cord-269353-wgeuh1i2	93	21	highest	high	JJS
cord-269353-wgeuh1i2	93	22	,	,	,
cord-269353-wgeuh1i2	93	23	followed	follow	VBN
cord-269353-wgeuh1i2	93	24	by	by	IN
cord-269353-wgeuh1i2	93	25	 	 	_SP
cord-269353-wgeuh1i2	93	26	Similarity	Similarity	NNP
cord-269353-wgeuh1i2	93	27	index	index	NN
cord-269353-wgeuh1i2	93	28	values	value	NNS
cord-269353-wgeuh1i2	93	29	D(A	d(a	VBP
cord-269353-wgeuh1i2	93	30	,	,	,
cord-269353-wgeuh1i2	93	31	B	b	NN
cord-269353-wgeuh1i2	93	32	)	)	-RRB-
cord-269353-wgeuh1i2	93	33	were	be	VBD
cord-269353-wgeuh1i2	93	34	obtained	obtain	VBN
cord-269353-wgeuh1i2	93	35	for	for	IN
cord-269353-wgeuh1i2	93	36	each	each	DT
cord-269353-wgeuh1i2	93	37	strain	strain	NN
cord-269353-wgeuh1i2	93	38	in	in	IN
cord-269353-wgeuh1i2	93	39	relation	relation	NN
cord-269353-wgeuh1i2	93	40	to	to	IN
cord-269353-wgeuh1i2	93	41	its	-PRON-	PRP$
cord-269353-wgeuh1i2	93	42	host(s	host(s	NNP
cord-269353-wgeuh1i2	93	43	)	)	-RRB-
cord-269353-wgeuh1i2	93	44	(	(	-LRB-
cord-269353-wgeuh1i2	93	45	Supplementary	Supplementary	NNP
cord-269353-wgeuh1i2	93	46	Tables	Tables	NNPS
cord-269353-wgeuh1i2	93	47	2	2	CD
cord-269353-wgeuh1i2	93	48	and	and	CC
cord-269353-wgeuh1i2	93	49	3	3	CD
cord-269353-wgeuh1i2	93	50	)	)	-RRB-
cord-269353-wgeuh1i2	93	51	.	.	.
cord-269353-wgeuh1i2	94	1	As	as	IN
cord-269353-wgeuh1i2	94	2	shown	show	VBN
cord-269353-wgeuh1i2	94	3	in	in	IN
cord-269353-wgeuh1i2	94	4	Fig	Fig	NNP
cord-269353-wgeuh1i2	94	5	.	.	.
cord-269353-wgeuh1i2	95	1	2a	2a	LS
cord-269353-wgeuh1i2	95	2	,	,	,
cord-269353-wgeuh1i2	95	3	the	the	DT
cord-269353-wgeuh1i2	95	4	indices	index	NNS
cord-269353-wgeuh1i2	95	5	of	of	IN
cord-269353-wgeuh1i2	95	6	the	the	DT
cord-269353-wgeuh1i2	95	7	fourth	fourth	JJ
cord-269353-wgeuh1i2	95	8	group	group	NN
cord-269353-wgeuh1i2	95	9	(	(	-LRB-
cord-269353-wgeuh1i2	95	10	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	95	11	vs	vs	IN
cord-269353-wgeuh1i2	95	12	hosts	host	NNS
cord-269353-wgeuh1i2	95	13	)	)	-RRB-
cord-269353-wgeuh1i2	95	14	were	be	VBD
cord-269353-wgeuh1i2	95	15	higher	high	JJR
cord-269353-wgeuh1i2	95	16	than	than	IN
cord-269353-wgeuh1i2	95	17	those	those	DT
cord-269353-wgeuh1i2	95	18	of	of	IN
cord-269353-wgeuh1i2	95	19	the	the	DT
cord-269353-wgeuh1i2	95	20	groups	group	NNS
cord-269353-wgeuh1i2	95	21	1	1	CD
cord-269353-wgeuh1i2	95	22	,	,	,
cord-269353-wgeuh1i2	95	23	2	2	CD
cord-269353-wgeuh1i2	95	24	,	,	,
cord-269353-wgeuh1i2	95	25	and	and	CC
cord-269353-wgeuh1i2	95	26	3	3	LS
cord-269353-wgeuh1i2	95	27	(	(	-LRB-
cord-269353-wgeuh1i2	95	28	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	95	29	vs	vs	IN
cord-269353-wgeuh1i2	95	30	arthropods	arthropod	NNS
cord-269353-wgeuh1i2	95	31	,	,	,
cord-269353-wgeuh1i2	95	32	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	95	33	vs	vs	IN
cord-269353-wgeuh1i2	95	34	mammals	mammal	NNS
cord-269353-wgeuh1i2	95	35	,	,	,
cord-269353-wgeuh1i2	95	36	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	95	37	vs	vs	IN
cord-269353-wgeuh1i2	95	38	Gallus	Gallus	NNP
cord-269353-wgeuh1i2	95	39	gallus	gallus	NN
cord-269353-wgeuh1i2	95	40	)	)	-RRB-
cord-269353-wgeuh1i2	95	41	.	.	.
cord-269353-wgeuh1i2	96	1	To	to	TO
cord-269353-wgeuh1i2	96	2	quantify	quantify	VB
cord-269353-wgeuh1i2	96	3	the	the	DT
cord-269353-wgeuh1i2	96	4	degree	degree	NN
cord-269353-wgeuh1i2	96	5	of	of	IN
cord-269353-wgeuh1i2	96	6	similarity	similarity	NN
cord-269353-wgeuh1i2	96	7	of	of	IN
cord-269353-wgeuh1i2	96	8	the	the	DT
cord-269353-wgeuh1i2	96	9	overall	overall	JJ
cord-269353-wgeuh1i2	96	10	codon	codon	NN
cord-269353-wgeuh1i2	96	11	usage	usage	NN
cord-269353-wgeuh1i2	96	12	pattern	pattern	NN
cord-269353-wgeuh1i2	96	13	between	between	IN
cord-269353-wgeuh1i2	96	14	20	20	CD
cord-269353-wgeuh1i2	96	15	different	different	JJ
cord-269353-wgeuh1i2	96	16	virus	virus	NN
cord-269353-wgeuh1i2	96	17	genera	genus	NNS
cord-269353-wgeuh1i2	96	18	and	and	CC
cord-269353-wgeuh1i2	96	19	their	-PRON-	PRP$
cord-269353-wgeuh1i2	96	20	hosts	host	NNS
cord-269353-wgeuh1i2	96	21	,	,	,
cord-269353-wgeuh1i2	96	22	the	the	DT
cord-269353-wgeuh1i2	96	23	similarity	similarity	NN
cord-269353-wgeuh1i2	96	24	index	index	NN
cord-269353-wgeuh1i2	96	25	D(A	d(a	NN
cord-269353-wgeuh1i2	96	26	,	,	,
cord-269353-wgeuh1i2	96	27	B	B	NNP
cord-269353-wgeuh1i2	96	28	)	)	-RRB-
cord-269353-wgeuh1i2	96	29	was	be	VBD
cord-269353-wgeuh1i2	96	30	calculated	calculate	VBN
cord-269353-wgeuh1i2	96	31	to	to	IN
cord-269353-wgeuh1i2	96	32	all	all	DT
cord-269353-wgeuh1i2	96	33	strains	strain	NNS
cord-269353-wgeuh1i2	96	34	(	(	-LRB-
cord-269353-wgeuh1i2	96	35	Fig	Fig	NNP
cord-269353-wgeuh1i2	96	36	.	.	.
cord-269353-wgeuh1i2	96	37	2b	2b	LS
cord-269353-wgeuh1i2	96	38	)	)	-RRB-
cord-269353-wgeuh1i2	97	1	(	(	-LRB-
cord-269353-wgeuh1i2	97	2	Fig	Fig	NNP
cord-269353-wgeuh1i2	97	3	.	.	.
cord-269353-wgeuh1i2	97	4	3	3	CD
cord-269353-wgeuh1i2	97	5	)	)	-RRB-
cord-269353-wgeuh1i2	97	6	.	.	.
cord-269353-wgeuh1i2	98	1	The	the	DT
cord-269353-wgeuh1i2	98	2	degeneracy	degeneracy	NN
cord-269353-wgeuh1i2	98	3	of	of	IN
cord-269353-wgeuh1i2	98	4	the	the	DT
cord-269353-wgeuh1i2	98	5	genetic	genetic	JJ
cord-269353-wgeuh1i2	98	6	code	code	NN
cord-269353-wgeuh1i2	98	7	implies	imply	VBZ
cord-269353-wgeuh1i2	98	8	that	that	IN
cord-269353-wgeuh1i2	98	9	several	several	JJ
cord-269353-wgeuh1i2	98	10	triplets	triplet	NNS
cord-269353-wgeuh1i2	98	11	can	can	MD
cord-269353-wgeuh1i2	98	12	code	code	VB
cord-269353-wgeuh1i2	98	13	for	for	IN
cord-269353-wgeuh1i2	98	14	the	the	DT
cord-269353-wgeuh1i2	98	15	same	same	JJ
cord-269353-wgeuh1i2	98	16	amino	amino	NN
cord-269353-wgeuh1i2	98	17	acid	acid	NN
cord-269353-wgeuh1i2	98	18	.	.	.
cord-269353-wgeuh1i2	99	1	The	the	DT
cord-269353-wgeuh1i2	99	2	use	use	NN
cord-269353-wgeuh1i2	99	3	of	of	IN
cord-269353-wgeuh1i2	99	4	synonymous	synonymous	JJ
cord-269353-wgeuh1i2	99	5	codons	codon	NNS
cord-269353-wgeuh1i2	99	6	in	in	IN
cord-269353-wgeuh1i2	99	7	gene	gene	NN
cord-269353-wgeuh1i2	99	8	coding	coding	NN
cord-269353-wgeuh1i2	99	9	regions	region	NNS
cord-269353-wgeuh1i2	99	10	dos	do	NNS
cord-269353-wgeuh1i2	99	11	not	not	RB
cord-269353-wgeuh1i2	99	12	occur	occur	VBP
cord-269353-wgeuh1i2	99	13	randomly	randomly	RB
cord-269353-wgeuh1i2	99	14	,	,	,
cord-269353-wgeuh1i2	99	15	and	and	CC
cord-269353-wgeuh1i2	99	16	codon	codon	NN
cord-269353-wgeuh1i2	99	17	usage	usage	NN
cord-269353-wgeuh1i2	99	18	bias	bias	NN
cord-269353-wgeuh1i2	99	19	is	be	VBZ
cord-269353-wgeuh1i2	99	20	very	very	RB
cord-269353-wgeuh1i2	99	21	common	common	JJ
cord-269353-wgeuh1i2	99	22	in	in	IN
cord-269353-wgeuh1i2	99	23	viruses	virus	NNS
cord-269353-wgeuh1i2	100	1	(	(	-LRB-
cord-269353-wgeuh1i2	100	2	Butt	Butt	NNP
cord-269353-wgeuh1i2	100	3	et	et	FW
cord-269353-wgeuh1i2	100	4	al	al	NNP
cord-269353-wgeuh1i2	100	5	.	.	.
cord-269353-wgeuh1i2	101	1	2014	2014	CD
cord-269353-wgeuh1i2	101	2	;	;	:
cord-269353-wgeuh1i2	101	3	Cristina	Cristina	NNP
cord-269353-wgeuh1i2	101	4	et	et	NNP
cord-269353-wgeuh1i2	101	5	al	al	NNP
cord-269353-wgeuh1i2	101	6	.	.	.
cord-269353-wgeuh1i2	101	7	2016	2016	CD
cord-269353-wgeuh1i2	102	1	;	;	:
cord-269353-wgeuh1i2	102	2	He	-PRON-	PRP
cord-269353-wgeuh1i2	102	3	et	et	FW
cord-269353-wgeuh1i2	102	4	al	al	NNP
cord-269353-wgeuh1i2	102	5	.	.	.
cord-269353-wgeuh1i2	102	6	2017	2017	CD
cord-269353-wgeuh1i2	103	1	;	;	:
cord-269353-wgeuh1i2	103	2	Moratorio	Moratorio	NNP
cord-269353-wgeuh1i2	103	3	et	et	NNP
cord-269353-wgeuh1i2	103	4	al	al	NNP
cord-269353-wgeuh1i2	103	5	.	.	.
cord-269353-wgeuh1i2	104	1	2013	2013	CD
cord-269353-wgeuh1i2	104	2	;	;	:
cord-269353-wgeuh1i2	104	3	Singh	Singh	NNP
cord-269353-wgeuh1i2	104	4	et	et	NNP
cord-269353-wgeuh1i2	104	5	al	al	NNP
cord-269353-wgeuh1i2	104	6	.	.	.
cord-269353-wgeuh1i2	104	7	2016	2016	CD
cord-269353-wgeuh1i2	104	8	)	)	-RRB-
cord-269353-wgeuh1i2	104	9	.	.	.
cord-269353-wgeuh1i2	105	1	Codon	codon	NN
cord-269353-wgeuh1i2	105	2	usage	usage	NN
cord-269353-wgeuh1i2	105	3	is	be	VBZ
cord-269353-wgeuh1i2	105	4	among	among	IN
cord-269353-wgeuh1i2	105	5	the	the	DT
cord-269353-wgeuh1i2	105	6	determinant	determinant	JJ
cord-269353-wgeuh1i2	105	7	factors	factor	NNS
cord-269353-wgeuh1i2	105	8	that	that	WDT
cord-269353-wgeuh1i2	105	9	influence	influence	VBP
cord-269353-wgeuh1i2	105	10	gene	gene	NN
cord-269353-wgeuh1i2	105	11	expression	expression	NN
cord-269353-wgeuh1i2	105	12	levels	level	NNS
cord-269353-wgeuh1i2	105	13	(	(	-LRB-
cord-269353-wgeuh1i2	105	14	Chaney	Chaney	NNP
cord-269353-wgeuh1i2	105	15	and	and	CC
cord-269353-wgeuh1i2	105	16	Clark	Clark	NNP
cord-269353-wgeuh1i2	105	17	2015	2015	CD
cord-269353-wgeuh1i2	105	18	;	;	:
cord-269353-wgeuh1i2	105	19	Zhou	Zhou	NNP
cord-269353-wgeuh1i2	105	20	et	et	NNP
cord-269353-wgeuh1i2	105	21	al	al	NNP
cord-269353-wgeuh1i2	105	22	.	.	.
cord-269353-wgeuh1i2	105	23	2016	2016	CD
cord-269353-wgeuh1i2	105	24	)	)	-RRB-
cord-269353-wgeuh1i2	105	25	.	.	.
cord-269353-wgeuh1i2	106	1	Because	because	IN
cord-269353-wgeuh1i2	106	2	viruses	virus	NNS
cord-269353-wgeuh1i2	106	3	do	do	VBP
cord-269353-wgeuh1i2	106	4	not	not	RB
cord-269353-wgeuh1i2	106	5	have	have	VB
cord-269353-wgeuh1i2	106	6	tRNAs	trnas	CD
cord-269353-wgeuh1i2	106	7	,	,	,
cord-269353-wgeuh1i2	106	8	and	and	CC
cord-269353-wgeuh1i2	106	9	rely	rely	VB
cord-269353-wgeuh1i2	106	10	on	on	IN
cord-269353-wgeuh1i2	106	11	host	host	NN
cord-269353-wgeuh1i2	106	12	cell	cell	NN
cord-269353-wgeuh1i2	106	13	machinery	machinery	NN
cord-269353-wgeuh1i2	106	14	for	for	IN
cord-269353-wgeuh1i2	106	15	replication	replication	NN
cord-269353-wgeuh1i2	106	16	,	,	,
cord-269353-wgeuh1i2	106	17	co	co	NN
cord-269353-wgeuh1i2	106	18	-	-	NN
cord-269353-wgeuh1i2	106	19	evolution	evolution	NN
cord-269353-wgeuh1i2	106	20	between	between	IN
cord-269353-wgeuh1i2	106	21	a	a	DT
cord-269353-wgeuh1i2	106	22	certain	certain	JJ
cord-269353-wgeuh1i2	106	23	RNA	RNA	NNP
cord-269353-wgeuh1i2	106	24	virus	virus	NN
cord-269353-wgeuh1i2	106	25	and	and	CC
cord-269353-wgeuh1i2	106	26	its	-PRON-	PRP$
cord-269353-wgeuh1i2	106	27	susceptible	susceptible	JJ
cord-269353-wgeuh1i2	106	28	hosts	host	NNS
cord-269353-wgeuh1i2	106	29	at	at	IN
cord-269353-wgeuh1i2	106	30	codon	codon	NN
cord-269353-wgeuh1i2	106	31	usages	usage	NNS
cord-269353-wgeuh1i2	106	32	have	have	VBP
cord-269353-wgeuh1i2	106	33	been	be	VBN
cord-269353-wgeuh1i2	106	34	observed	observe	VBN
cord-269353-wgeuh1i2	107	1	(	(	-LRB-
cord-269353-wgeuh1i2	107	2	Franzo	Franzo	NNP
cord-269353-wgeuh1i2	107	3	et	et	NNP
cord-269353-wgeuh1i2	107	4	al	al	NNP
cord-269353-wgeuh1i2	107	5	.	.	.
cord-269353-wgeuh1i2	107	6	2017	2017	CD
cord-269353-wgeuh1i2	108	1	;	;	:
cord-269353-wgeuh1i2	108	2	Rahman	Rahman	NNP
cord-269353-wgeuh1i2	108	3	et	et	NNP
cord-269353-wgeuh1i2	108	4	al	al	NNP
cord-269353-wgeuh1i2	108	5	.	.	.
cord-269353-wgeuh1i2	108	6	2017	2017	CD
cord-269353-wgeuh1i2	108	7	;	;	:
cord-269353-wgeuh1i2	108	8	Simón	Simón	NNP
cord-269353-wgeuh1i2	108	9	et	et	NNP
cord-269353-wgeuh1i2	108	10	al	al	NNP
cord-269353-wgeuh1i2	108	11	.	.	.
cord-269353-wgeuh1i2	108	12	2017	2017	CD
cord-269353-wgeuh1i2	108	13	)	)	-RRB-
cord-269353-wgeuh1i2	108	14	.	.	.
cord-269353-wgeuh1i2	109	1	However	however	RB
cord-269353-wgeuh1i2	109	2	,	,	,
cord-269353-wgeuh1i2	109	3	ambiguity	ambiguity	NN
cord-269353-wgeuh1i2	109	4	remains	remain	VBZ
cord-269353-wgeuh1i2	109	5	in	in	IN
cord-269353-wgeuh1i2	109	6	the	the	DT
cord-269353-wgeuh1i2	109	7	co	co	NN
cord-269353-wgeuh1i2	109	8	-	-	JJ
cord-269353-wgeuh1i2	109	9	evolution	evolution	JJ
cord-269353-wgeuh1i2	109	10	patterns	pattern	NNS
cord-269353-wgeuh1i2	109	11	of	of	IN
cord-269353-wgeuh1i2	109	12	different	different	JJ
cord-269353-wgeuh1i2	109	13	viruses	virus	NNS
cord-269353-wgeuh1i2	109	14	.	.	.
cord-269353-wgeuh1i2	110	1	Some	some	DT
cord-269353-wgeuh1i2	110	2	viruses	virus	NNS
cord-269353-wgeuh1i2	110	3	infect	infect	VBP
cord-269353-wgeuh1i2	110	4	a	a	DT
cord-269353-wgeuh1i2	110	5	broad	broad	JJ
cord-269353-wgeuh1i2	110	6	range	range	NN
cord-269353-wgeuh1i2	110	7	of	of	IN
cord-269353-wgeuh1i2	110	8	species	specie	NNS
cord-269353-wgeuh1i2	110	9	(	(	-LRB-
cord-269353-wgeuh1i2	110	10	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	110	11	)	)	-RRB-
cord-269353-wgeuh1i2	110	12	,	,	,
cord-269353-wgeuh1i2	110	13	whereas	whereas	IN
cord-269353-wgeuh1i2	110	14	others	other	NNS
cord-269353-wgeuh1i2	110	15	infect	infect	VBP
cord-269353-wgeuh1i2	110	16	only	only	RB
cord-269353-wgeuh1i2	110	17	a	a	DT
cord-269353-wgeuh1i2	110	18	single	single	JJ
cord-269353-wgeuh1i2	110	19	host	host	NN
cord-269353-wgeuh1i2	110	20	(	(	-LRB-
cord-269353-wgeuh1i2	110	21	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	110	22	)	)	-RRB-
cord-269353-wgeuh1i2	110	23	.	.	.
cord-269353-wgeuh1i2	111	1	Viruses	virus	NNS
cord-269353-wgeuh1i2	111	2	have	have	VBP
cord-269353-wgeuh1i2	111	3	very	very	RB
cord-269353-wgeuh1i2	111	4	diverse	diverse	JJ
cord-269353-wgeuh1i2	111	5	hosts	host	NNS
cord-269353-wgeuh1i2	111	6	,	,	,
cord-269353-wgeuh1i2	111	7	and	and	CC
cord-269353-wgeuh1i2	111	8	different	different	JJ
cord-269353-wgeuh1i2	111	9	hosts	host	NNS
cord-269353-wgeuh1i2	111	10	have	have	VBP
cord-269353-wgeuh1i2	111	11	very	very	RB
cord-269353-wgeuh1i2	111	12	diverse	diverse	JJ
cord-269353-wgeuh1i2	111	13	tRNA	trna	NN
cord-269353-wgeuh1i2	111	14	pools	pool	NNS
cord-269353-wgeuh1i2	111	15	.	.	.
cord-269353-wgeuh1i2	112	1	The	the	DT
cord-269353-wgeuh1i2	112	2	MD	MD	NNP
cord-269353-wgeuh1i2	112	3	and	and	CC
cord-269353-wgeuh1i2	112	4	D	D	NNP
cord-269353-wgeuh1i2	112	5	(	(	-LRB-
cord-269353-wgeuh1i2	112	6	A	a	NN
cord-269353-wgeuh1i2	112	7	,	,	,
cord-269353-wgeuh1i2	112	8	B	b	NN
cord-269353-wgeuh1i2	112	9	)	)	-RRB-
cord-269353-wgeuh1i2	112	10	values	value	NNS
cord-269353-wgeuh1i2	112	11	of	of	IN
cord-269353-wgeuh1i2	112	12	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	112	13	are	be	VBP
cord-269353-wgeuh1i2	112	14	significantly	significantly	RB
cord-269353-wgeuh1i2	112	15	higher	high	JJR
cord-269353-wgeuh1i2	112	16	than	than	IN
cord-269353-wgeuh1i2	112	17	those	those	DT
cord-269353-wgeuh1i2	112	18	of	of	IN
cord-269353-wgeuh1i2	112	19	the	the	DT
cord-269353-wgeuh1i2	112	20	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	112	21	vs.	vs.	IN
cord-269353-wgeuh1i2	112	22	Anopheles	Anopheles	NNP
cord-269353-wgeuh1i2	112	23	gambiae	gambiae	NN
cord-269353-wgeuh1i2	112	24	,	,	,
cord-269353-wgeuh1i2	112	25	Homo	Homo	NNP
cord-269353-wgeuh1i2	112	26	sapiens	sapiens	JJ
cord-269353-wgeuh1i2	112	27	,	,	,
cord-269353-wgeuh1i2	112	28	Gallus	Gallus	NNP
cord-269353-wgeuh1i2	112	29	gallus	gallus	NN
cord-269353-wgeuh1i2	112	30	,	,	,
cord-269353-wgeuh1i2	112	31	and	and	CC
cord-269353-wgeuh1i2	112	32	Macaca	Macaca	NNP
cord-269353-wgeuh1i2	112	33	mulatta	mulatta	NN
cord-269353-wgeuh1i2	112	34	(	(	-LRB-
cord-269353-wgeuh1i2	112	35	Figs	fig	NNS
cord-269353-wgeuh1i2	112	36	.	.	.
cord-269353-wgeuh1i2	113	1	1	1	CD
cord-269353-wgeuh1i2	113	2	and	and	CC
cord-269353-wgeuh1i2	113	3	2	2	CD
cord-269353-wgeuh1i2	113	4	)	)	-RRB-
cord-269353-wgeuh1i2	113	5	.	.	.
cord-269353-wgeuh1i2	114	1	Thus	thus	RB
cord-269353-wgeuh1i2	114	2	,	,	,
cord-269353-wgeuh1i2	114	3	and	and	CC
cord-269353-wgeuh1i2	114	4	as	as	IN
cord-269353-wgeuh1i2	114	5	our	-PRON-	PRP$
cord-269353-wgeuh1i2	114	6	hypothesis	hypothesis	NN
cord-269353-wgeuh1i2	114	7	predicts	predict	VBZ
cord-269353-wgeuh1i2	114	8	,	,	,
cord-269353-wgeuh1i2	114	9	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	114	10	appear	appear	VBP
cord-269353-wgeuh1i2	114	11	to	to	TO
cord-269353-wgeuh1i2	114	12	be	be	VB
cord-269353-wgeuh1i2	114	13	more	more	RBR
cord-269353-wgeuh1i2	114	14	precisely	precisely	RB
cord-269353-wgeuh1i2	114	15	adapted	adapt	VBN
cord-269353-wgeuh1i2	114	16	to	to	IN
cord-269353-wgeuh1i2	114	17	their	-PRON-	PRP$
cord-269353-wgeuh1i2	114	18	hosts	host	NNS
cord-269353-wgeuh1i2	114	19	'	'	POS
cord-269353-wgeuh1i2	114	20	codon	codon	NN
cord-269353-wgeuh1i2	114	21	usage	usage	NN
cord-269353-wgeuh1i2	114	22	pattern	pattern	NN
cord-269353-wgeuh1i2	114	23	and	and	CC
cord-269353-wgeuh1i2	114	24	tRNA	trna	NN
cord-269353-wgeuh1i2	114	25	pools	pool	NNS
cord-269353-wgeuh1i2	114	26	than	than	IN
cord-269353-wgeuh1i2	114	27	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	114	28	.	.	.
cord-269353-wgeuh1i2	115	1	Each	each	DT
cord-269353-wgeuh1i2	115	2	NSTV	NSTV	NNP
cord-269353-wgeuh1i2	115	3	can	can	MD
cord-269353-wgeuh1i2	115	4	infect	infect	VB
cord-269353-wgeuh1i2	115	5	one	one	CD
cord-269353-wgeuh1i2	115	6	host	host	NN
cord-269353-wgeuh1i2	115	7	only	only	RB
cord-269353-wgeuh1i2	115	8	.	.	.
cord-269353-wgeuh1i2	116	1	Therefore	therefore	RB
cord-269353-wgeuh1i2	116	2	,	,	,
cord-269353-wgeuh1i2	116	3	these	these	DT
cord-269353-wgeuh1i2	116	4	viruses	virus	NNS
cord-269353-wgeuh1i2	116	5	need	need	VBP
cord-269353-wgeuh1i2	116	6	to	to	TO
cord-269353-wgeuh1i2	116	7	fit	fit	VB
cord-269353-wgeuh1i2	116	8	only	only	RB
cord-269353-wgeuh1i2	116	9	one	one	CD
cord-269353-wgeuh1i2	116	10	host	host	NN
cord-269353-wgeuh1i2	116	11	's	's	POS
cord-269353-wgeuh1i2	116	12	tRNA	tRNA	NNP
cord-269353-wgeuh1i2	116	13	pool	pool	NN
cord-269353-wgeuh1i2	116	14	.	.	.
cord-269353-wgeuh1i2	117	1	They	-PRON-	PRP
cord-269353-wgeuh1i2	117	2	appear	appear	VBP
cord-269353-wgeuh1i2	117	3	to	to	TO
cord-269353-wgeuh1i2	117	4	have	have	VB
cord-269353-wgeuh1i2	117	5	evolved	evolve	VBN
cord-269353-wgeuh1i2	117	6	more	more	RBR
cord-269353-wgeuh1i2	117	7	consistent	consistent	JJ
cord-269353-wgeuh1i2	117	8	codon	codon	NN
cord-269353-wgeuh1i2	117	9	usage	usage	NN
cord-269353-wgeuh1i2	117	10	patterns	pattern	NNS
cord-269353-wgeuh1i2	117	11	with	with	IN
cord-269353-wgeuh1i2	117	12	their	-PRON-	PRP$
cord-269353-wgeuh1i2	117	13	hosts	host	NNS
cord-269353-wgeuh1i2	117	14	'	'	POS
cord-269353-wgeuh1i2	117	15	expression	expression	NN
cord-269353-wgeuh1i2	117	16	systems	system	NNS
cord-269353-wgeuh1i2	117	17	.	.	.
cord-269353-wgeuh1i2	118	1	In	in	IN
cord-269353-wgeuh1i2	118	2	contrast	contrast	NN
cord-269353-wgeuh1i2	118	3	,	,	,
cord-269353-wgeuh1i2	118	4	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	118	5	can	can	MD
cord-269353-wgeuh1i2	118	6	infect	infect	VB
cord-269353-wgeuh1i2	118	7	and	and	CC
cord-269353-wgeuh1i2	118	8	replicate	replicate	VB
cord-269353-wgeuh1i2	118	9	in	in	IN
cord-269353-wgeuh1i2	118	10	mammals	mammal	NNS
cord-269353-wgeuh1i2	118	11	,	,	,
cord-269353-wgeuh1i2	118	12	birds	bird	NNS
cord-269353-wgeuh1i2	118	13	,	,	,
cord-269353-wgeuh1i2	118	14	and	and	CC
cord-269353-wgeuh1i2	118	15	insects	insect	NNS
cord-269353-wgeuh1i2	118	16	.	.	.
cord-269353-wgeuh1i2	119	1	Thus	thus	RB
cord-269353-wgeuh1i2	119	2	,	,	,
cord-269353-wgeuh1i2	119	3	adaptation	adaptation	NN
cord-269353-wgeuh1i2	119	4	in	in	IN
cord-269353-wgeuh1i2	119	5	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	119	6	may	may	MD
cord-269353-wgeuh1i2	119	7	involve	involve	VB
cord-269353-wgeuh1i2	119	8	a	a	DT
cord-269353-wgeuh1i2	119	9	tradeoff	tradeoff	NN
cord-269353-wgeuh1i2	119	10	between	between	IN
cord-269353-wgeuh1i2	119	11	precise	precise	JJ
cord-269353-wgeuh1i2	119	12	and	and	CC
cord-269353-wgeuh1i2	119	13	functional	functional	JJ
cord-269353-wgeuh1i2	119	14	matching	matching	NN
cord-269353-wgeuh1i2	119	15	to	to	TO
cord-269353-wgeuh1i2	119	16	fit	fit	VB
cord-269353-wgeuh1i2	119	17	the	the	DT
cord-269353-wgeuh1i2	119	18	diverse	diverse	JJ
cord-269353-wgeuh1i2	119	19	tRNA	tRNA	NNP
cord-269353-wgeuh1i2	119	20	pools	pool	NNS
cord-269353-wgeuh1i2	119	21	of	of	IN
cord-269353-wgeuh1i2	119	22	multiple	multiple	JJ
cord-269353-wgeuh1i2	119	23	hosts	host	NNS
cord-269353-wgeuh1i2	119	24	.	.	.
cord-269353-wgeuh1i2	120	1	This	this	DT
cord-269353-wgeuh1i2	120	2	may	may	MD
cord-269353-wgeuh1i2	120	3	explain	explain	VB
cord-269353-wgeuh1i2	120	4	the	the	DT
cord-269353-wgeuh1i2	120	5	relatively	relatively	RB
cord-269353-wgeuh1i2	120	6	lower	low	JJR
cord-269353-wgeuh1i2	120	7	matching	matching	NN
cord-269353-wgeuh1i2	120	8	of	of	IN
cord-269353-wgeuh1i2	120	9	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	120	10	to	to	IN
cord-269353-wgeuh1i2	120	11	their	-PRON-	PRP$
cord-269353-wgeuh1i2	120	12	hosts	host	NNS
cord-269353-wgeuh1i2	120	13	.	.	.
cord-269353-wgeuh1i2	121	1	Enterovirus	enterovirus	NN
cord-269353-wgeuh1i2	121	2	,	,	,
cord-269353-wgeuh1i2	121	3	Hepacivirus	Hepacivirus	NNP
cord-269353-wgeuh1i2	121	4	and	and	CC
cord-269353-wgeuh1i2	121	5	Arterivirus	Arterivirus	NNP
cord-269353-wgeuh1i2	121	6	are	be	VBP
cord-269353-wgeuh1i2	121	7	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	121	8	and	and	CC
cord-269353-wgeuh1i2	121	9	their	-PRON-	PRP$
cord-269353-wgeuh1i2	121	10	D(A	d(a	NN
cord-269353-wgeuh1i2	121	11	,	,	,
cord-269353-wgeuh1i2	121	12	B	b	NN
cord-269353-wgeuh1i2	121	13	)	)	-RRB-
cord-269353-wgeuh1i2	121	14	values	value	NNS
cord-269353-wgeuh1i2	121	15	are	be	VBP
cord-269353-wgeuh1i2	121	16	relatively	relatively	RB
cord-269353-wgeuh1i2	121	17	low	low	JJ
cord-269353-wgeuh1i2	122	1	(	(	-LRB-
cord-269353-wgeuh1i2	122	2	Fig	Fig	NNP
cord-269353-wgeuh1i2	122	3	.	.	.
cord-269353-wgeuh1i2	122	4	2b	2b	NNP
cord-269353-wgeuh1i2	122	5	)	)	-RRB-
cord-269353-wgeuh1i2	122	6	.	.	.
cord-269353-wgeuh1i2	123	1	This	this	DT
cord-269353-wgeuh1i2	123	2	indicates	indicate	VBZ
cord-269353-wgeuh1i2	123	3	a	a	DT
cord-269353-wgeuh1i2	123	4	relatively	relatively	RB
cord-269353-wgeuh1i2	123	5	low	low	JJ
cord-269353-wgeuh1i2	123	6	extent	extent	NN
cord-269353-wgeuh1i2	123	7	of	of	IN
cord-269353-wgeuh1i2	123	8	similarity	similarity	NN
cord-269353-wgeuh1i2	123	9	in	in	IN
cord-269353-wgeuh1i2	123	10	overall	overall	JJ
cord-269353-wgeuh1i2	123	11	codon	codon	NN
cord-269353-wgeuh1i2	123	12	usage	usage	NN
cord-269353-wgeuh1i2	123	13	between	between	IN
cord-269353-wgeuh1i2	123	14	these	these	DT
cord-269353-wgeuh1i2	123	15	viruses	virus	NNS
cord-269353-wgeuh1i2	123	16	and	and	CC
cord-269353-wgeuh1i2	123	17	their	-PRON-	PRP$
cord-269353-wgeuh1i2	123	18	host	host	NN
cord-269353-wgeuh1i2	123	19	.	.	.
cord-269353-wgeuh1i2	124	1	These	these	DT
cord-269353-wgeuh1i2	124	2	viruses	virus	NNS
cord-269353-wgeuh1i2	124	3	may	may	MD
cord-269353-wgeuh1i2	124	4	not	not	RB
cord-269353-wgeuh1i2	124	5	need	need	VB
cord-269353-wgeuh1i2	124	6	to	to	TO
cord-269353-wgeuh1i2	124	7	replicate	replicate	VB
cord-269353-wgeuh1i2	124	8	rapidly	rapidly	RB
cord-269353-wgeuh1i2	124	9	.	.	.
cord-269353-wgeuh1i2	125	1	Other	other	JJ
cord-269353-wgeuh1i2	125	2	factors	factor	NNS
cord-269353-wgeuh1i2	125	3	,	,	,
cord-269353-wgeuh1i2	125	4	such	such	JJ
cord-269353-wgeuh1i2	125	5	as	as	IN
cord-269353-wgeuh1i2	125	6	mutational	mutational	JJ
cord-269353-wgeuh1i2	125	7	pressure	pressure	NN
cord-269353-wgeuh1i2	125	8	,	,	,
cord-269353-wgeuh1i2	125	9	may	may	MD
cord-269353-wgeuh1i2	125	10	also	also	RB
cord-269353-wgeuh1i2	125	11	play	play	VB
cord-269353-wgeuh1i2	125	12	a	a	DT
cord-269353-wgeuh1i2	125	13	role	role	NN
cord-269353-wgeuh1i2	125	14	in	in	IN
cord-269353-wgeuh1i2	125	15	determining	determine	VBG
cord-269353-wgeuh1i2	125	16	codon	codon	NN
cord-269353-wgeuh1i2	125	17	usage	usage	NN
cord-269353-wgeuh1i2	125	18	bias	bias	NN
cord-269353-wgeuh1i2	125	19	(	(	-LRB-
cord-269353-wgeuh1i2	125	20	Gu	Gu	NNP
cord-269353-wgeuh1i2	125	21	et	et	FW
cord-269353-wgeuh1i2	125	22	al	al	NNP
cord-269353-wgeuh1i2	125	23	.	.	.
cord-269353-wgeuh1i2	125	24	2004	2004	CD
cord-269353-wgeuh1i2	125	25	;	;	:
cord-269353-wgeuh1i2	125	26	Rahman	Rahman	NNP
cord-269353-wgeuh1i2	125	27	et	et	NNP
cord-269353-wgeuh1i2	125	28	al	al	NNP
cord-269353-wgeuh1i2	125	29	.	.	.
cord-269353-wgeuh1i2	125	30	2017	2017	CD
cord-269353-wgeuh1i2	125	31	;	;	:
cord-269353-wgeuh1i2	125	32	Wang	Wang	NNP
cord-269353-wgeuh1i2	125	33	et	et	NNP
cord-269353-wgeuh1i2	125	34	al	al	NNP
cord-269353-wgeuh1i2	125	35	.	.	NNP
cord-269353-wgeuh1i2	125	36	2011	2011	CD
cord-269353-wgeuh1i2	125	37	;	;	:
cord-269353-wgeuh1i2	125	38	Wong	Wong	NNP
cord-269353-wgeuh1i2	125	39	et	et	NNP
cord-269353-wgeuh1i2	125	40	al	al	NNP
cord-269353-wgeuh1i2	125	41	.	.	NNP
cord-269353-wgeuh1i2	125	42	2010	2010	CD
cord-269353-wgeuh1i2	125	43	)	)	-RRB-
cord-269353-wgeuh1i2	125	44	.	.	.
cord-269353-wgeuh1i2	126	1	To	to	TO
cord-269353-wgeuh1i2	126	2	quantify	quantify	VB
cord-269353-wgeuh1i2	126	3	the	the	DT
cord-269353-wgeuh1i2	126	4	extent	extent	NN
cord-269353-wgeuh1i2	126	5	of	of	IN
cord-269353-wgeuh1i2	126	6	variation	variation	NN
cord-269353-wgeuh1i2	126	7	in	in	IN
cord-269353-wgeuh1i2	126	8	codon	codon	NN
cord-269353-wgeuh1i2	126	9	usage	usage	NN
cord-269353-wgeuh1i2	126	10	,	,	,
cord-269353-wgeuh1i2	126	11	the	the	DT
cord-269353-wgeuh1i2	126	12	ENc	enc	NN
cord-269353-wgeuh1i2	126	13	values	value	NNS
cord-269353-wgeuh1i2	126	14	were	be	VBD
cord-269353-wgeuh1i2	126	15	calculated	calculate	VBN
cord-269353-wgeuh1i2	126	16	(	(	-LRB-
cord-269353-wgeuh1i2	126	17	Wright	Wright	NNP
cord-269353-wgeuh1i2	126	18	1990	1990	CD
cord-269353-wgeuh1i2	126	19	)	)	-RRB-
cord-269353-wgeuh1i2	126	20	.	.	.
cord-269353-wgeuh1i2	127	1	Most	Most	JJS
cord-269353-wgeuh1i2	127	2	viruses	virus	NNS
cord-269353-wgeuh1i2	127	3	have	have	VBP
cord-269353-wgeuh1i2	127	4	ENC	ENC	NNP
cord-269353-wgeuh1i2	127	5	values	value	NNS
cord-269353-wgeuh1i2	127	6	>	>	XX
cord-269353-wgeuh1i2	127	7	40	40	CD
cord-269353-wgeuh1i2	127	8	,	,	,
cord-269353-wgeuh1i2	127	9	which	which	WDT
cord-269353-wgeuh1i2	127	10	represents	represent	VBZ
cord-269353-wgeuh1i2	127	11	weak	weak	JJ
cord-269353-wgeuh1i2	127	12	codon	codon	NN
cord-269353-wgeuh1i2	127	13	bias	bias	NN
cord-269353-wgeuh1i2	127	14	.	.	.
cord-269353-wgeuh1i2	128	1	This	this	DT
cord-269353-wgeuh1i2	128	2	may	may	MD
cord-269353-wgeuh1i2	128	3	be	be	VB
cord-269353-wgeuh1i2	128	4	beneficial	beneficial	JJ
cord-269353-wgeuh1i2	128	5	for	for	IN
cord-269353-wgeuh1i2	128	6	efficient	efficient	JJ
cord-269353-wgeuh1i2	128	7	replication	replication	NN
cord-269353-wgeuh1i2	128	8	of	of	IN
cord-269353-wgeuh1i2	128	9	viruses	virus	NNS
cord-269353-wgeuh1i2	128	10	in	in	IN
cord-269353-wgeuh1i2	128	11	host	host	NN
cord-269353-wgeuh1i2	128	12	cells	cell	NNS
cord-269353-wgeuh1i2	128	13	with	with	IN
cord-269353-wgeuh1i2	128	14	potentially	potentially	RB
cord-269353-wgeuh1i2	128	15	distinct	distinct	JJ
cord-269353-wgeuh1i2	128	16	codon	codon	NN
cord-269353-wgeuh1i2	128	17	preferences	preference	NNS
cord-269353-wgeuh1i2	128	18	.	.	.
cord-269353-wgeuh1i2	129	1	The	the	DT
cord-269353-wgeuh1i2	129	2	codon	codon	NN
cord-269353-wgeuh1i2	129	3	preference	preference	NN
cord-269353-wgeuh1i2	129	4	of	of	IN
cord-269353-wgeuh1i2	129	5	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	129	6	is	be	VBZ
cord-269353-wgeuh1i2	129	7	relatively	relatively	RB
cord-269353-wgeuh1i2	129	8	stronger	strong	JJR
cord-269353-wgeuh1i2	129	9	than	than	IN
cord-269353-wgeuh1i2	129	10	for	for	IN
cord-269353-wgeuh1i2	129	11	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	129	12	(	(	-LRB-
cord-269353-wgeuh1i2	129	13	Fig	Fig	NNP
cord-269353-wgeuh1i2	129	14	.	.	.
cord-269353-wgeuh1i2	129	15	3	3	CD
cord-269353-wgeuh1i2	129	16	)	)	-RRB-
cord-269353-wgeuh1i2	129	17	.	.	.
cord-269353-wgeuh1i2	130	1	This	this	DT
cord-269353-wgeuh1i2	130	2	is	be	VBZ
cord-269353-wgeuh1i2	130	3	could	could	MD
cord-269353-wgeuh1i2	130	4	be	be	VB
cord-269353-wgeuh1i2	130	5	due	due	JJ
cord-269353-wgeuh1i2	130	6	to	to	IN
cord-269353-wgeuh1i2	130	7	weak	weak	JJ
cord-269353-wgeuh1i2	130	8	codon	codon	NN
cord-269353-wgeuh1i2	130	9	preference	preference	NN
cord-269353-wgeuh1i2	130	10	being	be	VBG
cord-269353-wgeuh1i2	130	11	advantageous	advantageous	JJ
cord-269353-wgeuh1i2	130	12	in	in	IN
cord-269353-wgeuh1i2	130	13	the	the	DT
cord-269353-wgeuh1i2	130	14	adaptation	adaptation	NN
cord-269353-wgeuh1i2	130	15	of	of	IN
cord-269353-wgeuh1i2	130	16	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	130	17	to	to	IN
cord-269353-wgeuh1i2	130	18	multiple	multiple	JJ
cord-269353-wgeuh1i2	130	19	host	host	NN
cord-269353-wgeuh1i2	130	20	expression	expression	NN
cord-269353-wgeuh1i2	130	21	systems	system	NNS
cord-269353-wgeuh1i2	130	22	.	.	.
cord-269353-wgeuh1i2	131	1	The	the	DT
cord-269353-wgeuh1i2	131	2	ability	ability	NN
cord-269353-wgeuh1i2	131	3	to	to	TO
cord-269353-wgeuh1i2	131	4	enter	enter	VB
cord-269353-wgeuh1i2	131	5	the	the	DT
cord-269353-wgeuh1i2	131	6	host	host	NN
cord-269353-wgeuh1i2	131	7	-	-	HYPH
cord-269353-wgeuh1i2	131	8	cell	cell	NN
cord-269353-wgeuh1i2	131	9	and	and	CC
cord-269353-wgeuh1i2	131	10	efficiently	efficiently	RB
cord-269353-wgeuh1i2	131	11	replicate	replicate	VB
cord-269353-wgeuh1i2	131	12	itself	-PRON-	PRP
cord-269353-wgeuh1i2	131	13	is	be	VBZ
cord-269353-wgeuh1i2	131	14	essential	essential	JJ
cord-269353-wgeuh1i2	131	15	for	for	IN
cord-269353-wgeuh1i2	131	16	viral	viral	JJ
cord-269353-wgeuh1i2	131	17	infection	infection	NN
cord-269353-wgeuh1i2	131	18	.	.	.
cord-269353-wgeuh1i2	132	1	Viruses	virus	NNS
cord-269353-wgeuh1i2	132	2	have	have	VBP
cord-269353-wgeuh1i2	132	3	coevolved	coevolve	VBN
cord-269353-wgeuh1i2	132	4	many	many	JJ
cord-269353-wgeuh1i2	132	5	pathways	pathway	NNS
cord-269353-wgeuh1i2	132	6	to	to	TO
cord-269353-wgeuh1i2	132	7	transcribe	transcribe	VB
cord-269353-wgeuh1i2	132	8	their	-PRON-	PRP$
cord-269353-wgeuh1i2	132	9	own	own	JJ
cord-269353-wgeuh1i2	132	10	genetic	genetic	JJ
cord-269353-wgeuh1i2	132	11	material	material	NN
cord-269353-wgeuh1i2	132	12	in	in	IN
cord-269353-wgeuh1i2	132	13	their	-PRON-	PRP$
cord-269353-wgeuh1i2	132	14	hosts	host	NNS
cord-269353-wgeuh1i2	133	1	(	(	-LRB-
cord-269353-wgeuh1i2	133	2	Harwig	Harwig	NNP
cord-269353-wgeuh1i2	133	3	et	et	NNP
cord-269353-wgeuh1i2	133	4	al	al	NNP
cord-269353-wgeuh1i2	133	5	.	.	.
cord-269353-wgeuh1i2	133	6	2017	2017	CD
cord-269353-wgeuh1i2	133	7	)	)	-RRB-
cord-269353-wgeuh1i2	133	8	.	.	.
cord-269353-wgeuh1i2	134	1	Codon	codon	NN
cord-269353-wgeuh1i2	134	2	usage	usage	NN
cord-269353-wgeuh1i2	134	3	in	in	IN
cord-269353-wgeuh1i2	134	4	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	134	5	may	may	MD
cord-269353-wgeuh1i2	134	6	involve	involve	VB
cord-269353-wgeuh1i2	134	7	a	a	DT
cord-269353-wgeuh1i2	134	8	tradeoff	tradeoff	NN
cord-269353-wgeuh1i2	134	9	between	between	IN
cord-269353-wgeuh1i2	134	10	precise	precise	JJ
cord-269353-wgeuh1i2	134	11	and	and	CC
cord-269353-wgeuh1i2	134	12	functional	functional	JJ
cord-269353-wgeuh1i2	134	13	matching	matching	NN
cord-269353-wgeuh1i2	134	14	to	to	TO
cord-269353-wgeuh1i2	134	15	fit	fit	VB
cord-269353-wgeuh1i2	134	16	the	the	DT
cord-269353-wgeuh1i2	134	17	diverse	diverse	JJ
cord-269353-wgeuh1i2	134	18	tRNA	tRNA	NNP
cord-269353-wgeuh1i2	134	19	pools	pool	NNS
cord-269353-wgeuh1i2	134	20	of	of	IN
cord-269353-wgeuh1i2	134	21	multiple	multiple	JJ
cord-269353-wgeuh1i2	134	22	hosts	host	NNS
cord-269353-wgeuh1i2	134	23	.	.	.
cord-269353-wgeuh1i2	135	1	As	as	IN
cord-269353-wgeuh1i2	135	2	expected	expect	VBN
cord-269353-wgeuh1i2	135	3	,	,	,
cord-269353-wgeuh1i2	135	4	our	-PRON-	PRP$
cord-269353-wgeuh1i2	135	5	analysis	analysis	NN
cord-269353-wgeuh1i2	135	6	show	show	VBP
cord-269353-wgeuh1i2	135	7	that	that	IN
cord-269353-wgeuh1i2	135	8	generally	generally	RB
cord-269353-wgeuh1i2	135	9	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	135	10	are	be	VBP
cord-269353-wgeuh1i2	135	11	more	more	RBR
cord-269353-wgeuh1i2	135	12	adapted	adapt	VBN
cord-269353-wgeuh1i2	135	13	to	to	IN
cord-269353-wgeuh1i2	135	14	their	-PRON-	PRP$
cord-269353-wgeuh1i2	135	15	hosts	host	NNS
cord-269353-wgeuh1i2	135	16	'	'	POS
cord-269353-wgeuh1i2	135	17	codon	codon	NN
cord-269353-wgeuh1i2	135	18	usage	usage	NN
cord-269353-wgeuh1i2	135	19	pattern	pattern	NN
cord-269353-wgeuh1i2	135	20	and	and	CC
cord-269353-wgeuh1i2	135	21	tRNA	trna	NN
cord-269353-wgeuh1i2	135	22	pools	pool	NNS
cord-269353-wgeuh1i2	135	23	than	than	IN
cord-269353-wgeuh1i2	135	24	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	135	25	.	.	.
cord-269353-wgeuh1i2	136	1	This	this	DT
cord-269353-wgeuh1i2	136	2	may	may	MD
cord-269353-wgeuh1i2	136	3	help	help	VB
cord-269353-wgeuh1i2	136	4	the	the	DT
cord-269353-wgeuh1i2	136	5	virus	virus	NN
cord-269353-wgeuh1i2	136	6	to	to	TO
cord-269353-wgeuh1i2	136	7	use	use	VB
cord-269353-wgeuh1i2	136	8	the	the	DT
cord-269353-wgeuh1i2	136	9	host	host	NN
cord-269353-wgeuh1i2	136	10	transcript	transcript	NN
cord-269353-wgeuh1i2	136	11	machinery	machinery	NN
cord-269353-wgeuh1i2	136	12	more	more	RBR
cord-269353-wgeuh1i2	136	13	efficiently	efficiently	RB
cord-269353-wgeuh1i2	136	14	and	and	CC
cord-269353-wgeuh1i2	136	15	,	,	,
cord-269353-wgeuh1i2	136	16	therefore	therefore	RB
cord-269353-wgeuh1i2	136	17	,	,	,
cord-269353-wgeuh1i2	136	18	replicate	replicate	VBP
cord-269353-wgeuh1i2	136	19	faster	fast	RBR
cord-269353-wgeuh1i2	136	20	.	.	.
cord-269353-wgeuh1i2	137	1	Supplementary	supplementary	JJ
cord-269353-wgeuh1i2	137	2	data	datum	NNS
cord-269353-wgeuh1i2	137	3	to	to	IN
cord-269353-wgeuh1i2	137	4	this	this	DT
cord-269353-wgeuh1i2	137	5	article	article	NN
cord-269353-wgeuh1i2	137	6	can	can	MD
cord-269353-wgeuh1i2	137	7	be	be	VB
cord-269353-wgeuh1i2	137	8	found	find	VBN
cord-269353-wgeuh1i2	137	9	online	online	RB
cord-269353-wgeuh1i2	137	10	at	at	IN
cord-269353-wgeuh1i2	137	11	https://	https://	NNP
cord-269353-wgeuh1i2	137	12	doi.org/10.1016/j.meegid.2018.05.034	doi.org/10.1016/j.meegid.2018.05.034	NNP
cord-269353-wgeuh1i2	137	13	.	.	.
cord-269353-wgeuh1i2	138	1	(	(	-LRB-
cord-269353-wgeuh1i2	138	2	a	a	LS
cord-269353-wgeuh1i2	138	3	)	)	-RRB-
cord-269353-wgeuh1i2	138	4	Group	group	NN
cord-269353-wgeuh1i2	138	5	1	1	CD
cord-269353-wgeuh1i2	138	6	is	be	VBZ
cord-269353-wgeuh1i2	138	7	the	the	DT
cord-269353-wgeuh1i2	138	8	similarity	similarity	NN
cord-269353-wgeuh1i2	138	9	degree	degree	NN
cord-269353-wgeuh1i2	138	10	between	between	IN
cord-269353-wgeuh1i2	138	11	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	138	12	and	and	CC
cord-269353-wgeuh1i2	138	13	arthropods	arthropod	NNS
cord-269353-wgeuh1i2	138	14	.	.	.
cord-269353-wgeuh1i2	139	1	Group	group	NN
cord-269353-wgeuh1i2	139	2	2	2	CD
cord-269353-wgeuh1i2	139	3	is	be	VBZ
cord-269353-wgeuh1i2	139	4	the	the	DT
cord-269353-wgeuh1i2	139	5	similarity	similarity	NN
cord-269353-wgeuh1i2	139	6	degree	degree	NN
cord-269353-wgeuh1i2	139	7	between	between	IN
cord-269353-wgeuh1i2	139	8	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	139	9	and	and	CC
cord-269353-wgeuh1i2	139	10	mammals	mammal	NNS
cord-269353-wgeuh1i2	139	11	.	.	.
cord-269353-wgeuh1i2	140	1	Group	group	NN
cord-269353-wgeuh1i2	140	2	3	3	CD
cord-269353-wgeuh1i2	140	3	is	be	VBZ
cord-269353-wgeuh1i2	140	4	the	the	DT
cord-269353-wgeuh1i2	140	5	similarity	similarity	NN
cord-269353-wgeuh1i2	140	6	degree	degree	NN
cord-269353-wgeuh1i2	140	7	between	between	IN
cord-269353-wgeuh1i2	140	8	BSTVs	bstv	NNS
cord-269353-wgeuh1i2	140	9	and	and	CC
cord-269353-wgeuh1i2	140	10	Gallus	Gallus	NNP
cord-269353-wgeuh1i2	140	11	gallus	gallus	NN
cord-269353-wgeuh1i2	140	12	.	.	.
cord-269353-wgeuh1i2	141	1	Group	group	NN
cord-269353-wgeuh1i2	141	2	4	4	CD
cord-269353-wgeuh1i2	141	3	is	be	VBZ
cord-269353-wgeuh1i2	141	4	the	the	DT
cord-269353-wgeuh1i2	141	5	similarity	similarity	NN
cord-269353-wgeuh1i2	141	6	degree	degree	NN
cord-269353-wgeuh1i2	141	7	between	between	IN
cord-269353-wgeuh1i2	141	8	NSTVs	nstv	NNS
cord-269353-wgeuh1i2	141	9	and	and	CC
cord-269353-wgeuh1i2	141	10	a	a	DT
cord-269353-wgeuh1i2	141	11	particular	particular	JJ
cord-269353-wgeuh1i2	141	12	host	host	NN
cord-269353-wgeuh1i2	141	13	.	.	.
cord-269353-wgeuh1i2	142	1	(	(	-LRB-
cord-269353-wgeuh1i2	142	2	b	b	NN
cord-269353-wgeuh1i2	142	3	)	)	-RRB-
cord-269353-wgeuh1i2	143	1	The	the	DT
cord-269353-wgeuh1i2	143	2	similarity	similarity	NN
cord-269353-wgeuh1i2	143	3	degree	degree	NN
cord-269353-wgeuh1i2	143	4	of	of	IN
cord-269353-wgeuh1i2	143	5	the	the	DT
cord-269353-wgeuh1i2	143	6	overall	overall	JJ
cord-269353-wgeuh1i2	143	7	codon	codon	NN
cord-269353-wgeuh1i2	143	8	usage	usage	NN
cord-269353-wgeuh1i2	143	9	bias	bias	NN
cord-269353-wgeuh1i2	143	10	between	between	IN
cord-269353-wgeuh1i2	143	11	20	20	CD
cord-269353-wgeuh1i2	143	12	virus	virus	NN
cord-269353-wgeuh1i2	143	13	genera	genus	NNS
cord-269353-wgeuh1i2	143	14	(	(	-LRB-
cord-269353-wgeuh1i2	143	15	+	+	CC
cord-269353-wgeuh1i2	143	16	ssRNA	ssrna	NN
cord-269353-wgeuh1i2	143	17	)	)	-RRB-
cord-269353-wgeuh1i2	143	18	and	and	CC
cord-269353-wgeuh1i2	143	19	the	the	DT
cord-269353-wgeuh1i2	143	20	hosts	host	NNS
cord-269353-wgeuh1i2	143	21	.	.	.
cord-269353-wgeuh1i2	144	1	YS	YS	NNP
cord-269353-wgeuh1i2	144	2	:	:	:
cord-269353-wgeuh1i2	144	3	designed	design	VBN
cord-269353-wgeuh1i2	144	4	the	the	DT
cord-269353-wgeuh1i2	144	5	study	study	NN
cord-269353-wgeuh1i2	144	6	;	;	:
cord-269353-wgeuh1i2	144	7	LT	LT	NNP
cord-269353-wgeuh1i2	144	8	and	and	CC
cord-269353-wgeuh1i2	144	9	XS	XS	NNP
cord-269353-wgeuh1i2	144	10	:	:	:
cord-269353-wgeuh1i2	144	11	analyzed	analyze	VBD
cord-269353-wgeuh1i2	144	12	the	the	DT
cord-269353-wgeuh1i2	144	13	data	datum	NNS
cord-269353-wgeuh1i2	144	14	;	;	:
cord-269353-wgeuh1i2	144	15	LT	LT	NNP
cord-269353-wgeuh1i2	144	16	,	,	,
cord-269353-wgeuh1i2	144	17	RWM	RWM	NNP
cord-269353-wgeuh1i2	144	18	and	and	CC
cord-269353-wgeuh1i2	144	19	YS	YS	NNP
cord-269353-wgeuh1i2	144	20	:	:	:
cord-269353-wgeuh1i2	144	21	drafted	draft	VBD
cord-269353-wgeuh1i2	144	22	the	the	DT
cord-269353-wgeuh1i2	144	23	manuscript	manuscript	NN
cord-269353-wgeuh1i2	144	24	;	;	:
cord-269353-wgeuh1i2	144	25	All	all	DT
cord-269353-wgeuh1i2	144	26	authors	author	NNS
cord-269353-wgeuh1i2	144	27	read	read	VBP
cord-269353-wgeuh1i2	144	28	and	and	CC
cord-269353-wgeuh1i2	144	29	approved	approve	VBD
cord-269353-wgeuh1i2	144	30	the	the	DT
cord-269353-wgeuh1i2	144	31	final	final	JJ
cord-269353-wgeuh1i2	144	32	manuscript	manuscript	NN
cord-269353-wgeuh1i2	144	33	.	.	.
cord-269353-wgeuh1i2	144	34	 	 	_SP
cord-269353-wgeuh1i2	145	1	Modulation	modulation	NN
cord-269353-wgeuh1i2	145	2	of	of	IN
cord-269353-wgeuh1i2	145	3	poliovirus	poliovirus	NN
cord-269353-wgeuh1i2	145	4	replicative	replicative	JJ
cord-269353-wgeuh1i2	145	5	fitness	fitness	NN
cord-269353-wgeuh1i2	145	6	in	in	IN
cord-269353-wgeuh1i2	145	7	HeLa	HeLa	NNP
cord-269353-wgeuh1i2	145	8	cells	cell	NNS
cord-269353-wgeuh1i2	145	9	by	by	IN
cord-269353-wgeuh1i2	145	10	deoptimization	deoptimization	NN
cord-269353-wgeuh1i2	145	11	of	of	IN
cord-269353-wgeuh1i2	145	12	synonymous	synonymous	JJ
cord-269353-wgeuh1i2	145	13	codon	codon	NN
cord-269353-wgeuh1i2	145	14	usage	usage	NN
cord-269353-wgeuh1i2	145	15	in	in	IN
cord-269353-wgeuh1i2	145	16	the	the	DT
cord-269353-wgeuh1i2	145	17	capsid	capsid	JJ
cord-269353-wgeuh1i2	145	18	region	region	NN
cord-269353-wgeuh1i2	145	19	Genome	genome	NN
cord-269353-wgeuh1i2	145	20	-	-	HYPH
cord-269353-wgeuh1i2	145	21	wide	wide	JJ
cord-269353-wgeuh1i2	145	22	analysis	analysis	NN
cord-269353-wgeuh1i2	145	23	of	of	IN
cord-269353-wgeuh1i2	145	24	codon	codon	NN
cord-269353-wgeuh1i2	145	25	usage	usage	NN
cord-269353-wgeuh1i2	145	26	and	and	CC
cord-269353-wgeuh1i2	145	27	influencing	influence	VBG
cord-269353-wgeuh1i2	145	28	factors	factor	NNS
cord-269353-wgeuh1i2	145	29	in	in	IN
cord-269353-wgeuh1i2	145	30	chikungunya	chikungunya	NN
cord-269353-wgeuh1i2	145	31	viruses	virus	NNS
cord-269353-wgeuh1i2	145	32	Genome	genome	NN
cord-269353-wgeuh1i2	145	33	-	-	HYPH
cord-269353-wgeuh1i2	145	34	wide	wide	JJ
cord-269353-wgeuh1i2	145	35	analysis	analysis	NN
cord-269353-wgeuh1i2	145	36	of	of	IN
cord-269353-wgeuh1i2	145	37	codon	codon	NN
cord-269353-wgeuh1i2	145	38	usage	usage	NN
cord-269353-wgeuh1i2	145	39	bias	bias	NN
cord-269353-wgeuh1i2	145	40	in	in	IN
cord-269353-wgeuh1i2	145	41	Bovine	bovine	JJ
cord-269353-wgeuh1i2	145	42	Coronavirus	Coronavirus	NNP
cord-269353-wgeuh1i2	145	43	Roles	Roles	NNPS
cord-269353-wgeuh1i2	145	44	for	for	IN
cord-269353-wgeuh1i2	145	45	synonymous	synonymous	JJ
cord-269353-wgeuh1i2	145	46	codon	codon	NN
cord-269353-wgeuh1i2	145	47	usage	usage	NN
cord-269353-wgeuh1i2	145	48	in	in	IN
cord-269353-wgeuh1i2	145	49	protein	protein	NN
cord-269353-wgeuh1i2	145	50	biogenesis	biogenesis	NN
cord-269353-wgeuh1i2	146	1	The	the	DT
cord-269353-wgeuh1i2	146	2	effect	effect	NN
cord-269353-wgeuh1i2	146	3	of	of	IN
cord-269353-wgeuh1i2	146	4	mutation	mutation	NN
cord-269353-wgeuh1i2	146	5	and	and	CC
cord-269353-wgeuh1i2	146	6	selection	selection	NN
cord-269353-wgeuh1i2	146	7	on	on	IN
cord-269353-wgeuh1i2	146	8	codon	codon	NN
cord-269353-wgeuh1i2	146	9	adaptation	adaptation	NN
cord-269353-wgeuh1i2	146	10	in	in	IN
cord-269353-wgeuh1i2	146	11	Escherichia	Escherichia	NNP
cord-269353-wgeuh1i2	146	12	coli	coli	NNS
cord-269353-wgeuh1i2	146	13	bacteriophage	bacteriophage	NN
cord-269353-wgeuh1i2	147	1	Hepatitis	Hepatitis	NNP
cord-269353-wgeuh1i2	147	2	A	a	DT
cord-269353-wgeuh1i2	147	3	virus	virus	NN
cord-269353-wgeuh1i2	147	4	adaptation	adaptation	NN
cord-269353-wgeuh1i2	147	5	to	to	IN
cord-269353-wgeuh1i2	147	6	cellular	cellular	JJ
cord-269353-wgeuh1i2	147	7	shutoff	shutoff	NN
cord-269353-wgeuh1i2	147	8	is	be	VBZ
cord-269353-wgeuh1i2	147	9	driven	drive	VBN
cord-269353-wgeuh1i2	147	10	by	by	IN
cord-269353-wgeuh1i2	147	11	dynamic	dynamic	JJ
cord-269353-wgeuh1i2	147	12	adjustments	adjustment	NNS
cord-269353-wgeuh1i2	147	13	of	of	IN
cord-269353-wgeuh1i2	147	14	codon	codon	NN
cord-269353-wgeuh1i2	147	15	usage	usage	NN
cord-269353-wgeuh1i2	147	16	and	and	CC
cord-269353-wgeuh1i2	147	17	results	result	NNS
cord-269353-wgeuh1i2	147	18	in	in	IN
cord-269353-wgeuh1i2	147	19	the	the	DT
cord-269353-wgeuh1i2	147	20	selection	selection	NN
cord-269353-wgeuh1i2	147	21	of	of	IN
cord-269353-wgeuh1i2	147	22	populations	population	NNS
cord-269353-wgeuh1i2	147	23	with	with	IN
cord-269353-wgeuh1i2	147	24	altered	alter	VBN
cord-269353-wgeuh1i2	147	25	capsids	capsid	NNS
cord-269353-wgeuh1i2	148	1	A	a	DT
cord-269353-wgeuh1i2	148	2	detailed	detailed	JJ
cord-269353-wgeuh1i2	148	3	comparative	comparative	JJ
cord-269353-wgeuh1i2	148	4	analysis	analysis	NN
cord-269353-wgeuh1i2	148	5	of	of	IN
cord-269353-wgeuh1i2	148	6	codon	codon	NN
cord-269353-wgeuh1i2	148	7	usage	usage	NN
cord-269353-wgeuh1i2	148	8	bias	bias	NN
cord-269353-wgeuh1i2	148	9	in	in	IN
cord-269353-wgeuh1i2	148	10	Zika	Zika	NNP
cord-269353-wgeuh1i2	148	11	virus	virus	NN
cord-269353-wgeuh1i2	148	12	Canine	canine	JJ
cord-269353-wgeuh1i2	148	13	parvovirus	parvovirus	NN
cord-269353-wgeuh1i2	148	14	type	type	NN
cord-269353-wgeuh1i2	148	15	2	2	CD
cord-269353-wgeuh1i2	148	16	(	(	-LRB-
cord-269353-wgeuh1i2	148	17	CPV-2	CPV-2	NNP
cord-269353-wgeuh1i2	148	18	)	)	-RRB-
cord-269353-wgeuh1i2	148	19	and	and	CC
cord-269353-wgeuh1i2	149	1	Feline	feline	JJ
cord-269353-wgeuh1i2	149	2	panleukopenia	panleukopenia	NNP
cord-269353-wgeuh1i2	149	3	virus	virus	NN
cord-269353-wgeuh1i2	149	4	(	(	-LRB-
cord-269353-wgeuh1i2	149	5	FPV	FPV	NNP
cord-269353-wgeuh1i2	149	6	)	)	-RRB-
cord-269353-wgeuh1i2	149	7	codon	codon	NNP
cord-269353-wgeuh1i2	149	8	bias	bias	NN
cord-269353-wgeuh1i2	149	9	analysis	analysis	NN
cord-269353-wgeuh1i2	149	10	reveals	reveal	VBZ
cord-269353-wgeuh1i2	149	11	a	a	DT
cord-269353-wgeuh1i2	149	12	progressive	progressive	JJ
cord-269353-wgeuh1i2	149	13	adaptation	adaptation	NN
cord-269353-wgeuh1i2	149	14	to	to	IN
cord-269353-wgeuh1i2	149	15	the	the	DT
cord-269353-wgeuh1i2	149	16	new	new	JJ
cord-269353-wgeuh1i2	149	17	niche	niche	NN
cord-269353-wgeuh1i2	149	18	after	after	IN
cord-269353-wgeuh1i2	149	19	the	the	DT
cord-269353-wgeuh1i2	149	20	host	host	NN
cord-269353-wgeuh1i2	149	21	jump	jump	NN
cord-269353-wgeuh1i2	149	22	Analysis	Analysis	NNP
cord-269353-wgeuh1i2	149	23	of	of	IN
cord-269353-wgeuh1i2	149	24	synonymous	synonymous	JJ
cord-269353-wgeuh1i2	149	25	codon	codon	NN
cord-269353-wgeuh1i2	149	26	usage	usage	NN
cord-269353-wgeuh1i2	149	27	in	in	IN
cord-269353-wgeuh1i2	149	28	SARS	SARS	NNP
cord-269353-wgeuh1i2	149	29	Coronavirus	Coronavirus	NNP
cord-269353-wgeuh1i2	149	30	and	and	CC
cord-269353-wgeuh1i2	149	31	other	other	JJ
cord-269353-wgeuh1i2	149	32	viruses	virus	NNS
cord-269353-wgeuh1i2	149	33	in	in	IN
cord-269353-wgeuh1i2	149	34	the	the	DT
cord-269353-wgeuh1i2	149	35	Nidovirales	Nidovirales	NNP
cord-269353-wgeuh1i2	150	1	The	the	DT
cord-269353-wgeuh1i2	150	2	battle	battle	NN
cord-269353-wgeuh1i2	150	3	of	of	IN
cord-269353-wgeuh1i2	150	4	RNA	RNA	NNP
cord-269353-wgeuh1i2	150	5	synthesis	synthesis	NN
cord-269353-wgeuh1i2	150	6	:	:	:
cord-269353-wgeuh1i2	150	7	virus	virus	NN
cord-269353-wgeuh1i2	150	8	versus	versus	IN
cord-269353-wgeuh1i2	150	9	host	host	NN
cord-269353-wgeuh1i2	150	10	Codon	Codon	NNP
cord-269353-wgeuh1i2	150	11	usage	usage	NN
cord-269353-wgeuh1i2	150	12	bias	bias	NN
cord-269353-wgeuh1i2	150	13	in	in	IN
cord-269353-wgeuh1i2	150	14	the	the	DT
cord-269353-wgeuh1i2	150	15	N	n	CD
cord-269353-wgeuh1i2	150	16	gene	gene	NN
cord-269353-wgeuh1i2	150	17	of	of	IN
cord-269353-wgeuh1i2	150	18	rabies	rabies	NN
cord-269353-wgeuh1i2	150	19	virus	virus	NN
cord-269353-wgeuh1i2	150	20	Codon	Codon	NNP
cord-269353-wgeuh1i2	150	21	usage	usage	NN
cord-269353-wgeuh1i2	150	22	and	and	CC
cord-269353-wgeuh1i2	150	23	tRNA	trna	NN
cord-269353-wgeuh1i2	150	24	genes	gene	NNS
cord-269353-wgeuh1i2	150	25	in	in	IN
cord-269353-wgeuh1i2	150	26	eukaryotes	eukaryote	NNS
cord-269353-wgeuh1i2	150	27	:	:	:
cord-269353-wgeuh1i2	150	28	correlation	correlation	NN
cord-269353-wgeuh1i2	150	29	of	of	IN
cord-269353-wgeuh1i2	150	30	codon	codon	NN
cord-269353-wgeuh1i2	150	31	usage	usage	NN
cord-269353-wgeuh1i2	150	32	diversity	diversity	NN
cord-269353-wgeuh1i2	150	33	with	with	IN
cord-269353-wgeuh1i2	150	34	translation	translation	NN
cord-269353-wgeuh1i2	150	35	efficiency	efficiency	NN
cord-269353-wgeuh1i2	150	36	and	and	CC
cord-269353-wgeuh1i2	150	37	with	with	IN
cord-269353-wgeuh1i2	150	38	CG	CG	NNP
cord-269353-wgeuh1i2	150	39	-	-	HYPH
cord-269353-wgeuh1i2	150	40	dinucleotide	dinucleotide	NN
cord-269353-wgeuh1i2	150	41	usage	usage	NN
cord-269353-wgeuh1i2	150	42	as	as	IN
cord-269353-wgeuh1i2	150	43	assessed	assess	VBN
cord-269353-wgeuh1i2	150	44	by	by	IN
cord-269353-wgeuh1i2	150	45	multivariate	multivariate	JJ
cord-269353-wgeuh1i2	150	46	analysis	analysis	NN
cord-269353-wgeuh1i2	150	47	Synthesis	Synthesis	NNP
cord-269353-wgeuh1i2	150	48	of	of	IN
cord-269353-wgeuh1i2	150	49	a	a	DT
cord-269353-wgeuh1i2	150	50	new	new	JJ
cord-269353-wgeuh1i2	150	51	Cre	Cre	NNP
cord-269353-wgeuh1i2	150	52	recombinase	recombinase	NN
cord-269353-wgeuh1i2	150	53	gene	gene	NN
cord-269353-wgeuh1i2	150	54	based	base	VBN
cord-269353-wgeuh1i2	150	55	on	on	IN
cord-269353-wgeuh1i2	150	56	optimal	optimal	JJ
cord-269353-wgeuh1i2	150	57	codon	codon	NN
cord-269353-wgeuh1i2	150	58	usage	usage	NN
cord-269353-wgeuh1i2	150	59	for	for	IN
cord-269353-wgeuh1i2	150	60	mammalian	mammalian	JJ
cord-269353-wgeuh1i2	150	61	systems	system	NNS
cord-269353-wgeuh1i2	150	62	Revelation	revelation	NN
cord-269353-wgeuh1i2	150	63	of	of	IN
cord-269353-wgeuh1i2	150	64	influencing	influence	VBG
cord-269353-wgeuh1i2	150	65	factors	factor	NNS
cord-269353-wgeuh1i2	150	66	in	in	IN
cord-269353-wgeuh1i2	150	67	overall	overall	JJ
cord-269353-wgeuh1i2	150	68	codon	codon	NN
cord-269353-wgeuh1i2	150	69	usage	usage	NN
cord-269353-wgeuh1i2	150	70	bias	bias	NN
cord-269353-wgeuh1i2	150	71	of	of	IN
cord-269353-wgeuh1i2	150	72	equine	equine	JJ
cord-269353-wgeuh1i2	150	73	influenza	influenza	NN
cord-269353-wgeuh1i2	150	74	viruses	virus	NNS
cord-269353-wgeuh1i2	150	75	Evolutionary	evolutionary	JJ
cord-269353-wgeuh1i2	150	76	and	and	CC
cord-269353-wgeuh1i2	150	77	genetic	genetic	JJ
cord-269353-wgeuh1i2	150	78	analysis	analysis	NN
cord-269353-wgeuh1i2	150	79	of	of	IN
cord-269353-wgeuh1i2	150	80	the	the	DT
cord-269353-wgeuh1i2	150	81	VP2	VP2	NNP
cord-269353-wgeuh1i2	150	82	gene	gene	NN
cord-269353-wgeuh1i2	150	83	of	of	IN
cord-269353-wgeuh1i2	150	84	canine	canine	JJ
cord-269353-wgeuh1i2	150	85	parvovirus	parvovirus	NN
cord-269353-wgeuh1i2	150	86	A	a	DT
cord-269353-wgeuh1i2	150	87	detailed	detailed	JJ
cord-269353-wgeuh1i2	150	88	comparative	comparative	JJ
cord-269353-wgeuh1i2	150	89	analysis	analysis	NN
cord-269353-wgeuh1i2	150	90	on	on	IN
cord-269353-wgeuh1i2	150	91	the	the	DT
cord-269353-wgeuh1i2	150	92	overall	overall	JJ
cord-269353-wgeuh1i2	150	93	codon	codon	NN
cord-269353-wgeuh1i2	150	94	usage	usage	NN
cord-269353-wgeuh1i2	150	95	patterns	pattern	NNS
cord-269353-wgeuh1i2	150	96	in	in	IN
cord-269353-wgeuh1i2	150	97	West	West	NNP
cord-269353-wgeuh1i2	150	98	Nile	Nile	NNP
cord-269353-wgeuh1i2	150	99	virus	virus	NN
cord-269353-wgeuh1i2	150	100	Reduction	reduction	NN
cord-269353-wgeuh1i2	150	101	of	of	IN
cord-269353-wgeuh1i2	150	102	the	the	DT
cord-269353-wgeuh1i2	150	103	rate	rate	NN
cord-269353-wgeuh1i2	150	104	of	of	IN
cord-269353-wgeuh1i2	150	105	poliovirus	poliovirus	NN
cord-269353-wgeuh1i2	150	106	protein	protein	NN
cord-269353-wgeuh1i2	150	107	synthesis	synthesis	NN
cord-269353-wgeuh1i2	150	108	through	through	IN
cord-269353-wgeuh1i2	150	109	large	large	JJ
cord-269353-wgeuh1i2	150	110	-	-	HYPH
cord-269353-wgeuh1i2	150	111	scale	scale	NN
cord-269353-wgeuh1i2	150	112	codon	codon	NN
cord-269353-wgeuh1i2	150	113	deoptimization	deoptimization	NN
cord-269353-wgeuh1i2	150	114	causes	cause	VBZ
cord-269353-wgeuh1i2	150	115	attenuation	attenuation	NN
cord-269353-wgeuh1i2	150	116	of	of	IN
cord-269353-wgeuh1i2	150	117	viral	viral	JJ
cord-269353-wgeuh1i2	150	118	virulence	virulence	NN
cord-269353-wgeuh1i2	150	119	by	by	IN
cord-269353-wgeuh1i2	150	120	lowering	lower	VBG
cord-269353-wgeuh1i2	150	121	specific	specific	JJ
cord-269353-wgeuh1i2	150	122	infectivity	infectivity	NN
cord-269353-wgeuh1i2	150	123	Quantitative	quantitative	JJ
cord-269353-wgeuh1i2	150	124	effect	effect	NN
cord-269353-wgeuh1i2	150	125	of	of	IN
cord-269353-wgeuh1i2	150	126	suboptimal	suboptimal	JJ
cord-269353-wgeuh1i2	150	127	codon	codon	NN
cord-269353-wgeuh1i2	150	128	usage	usage	NN
cord-269353-wgeuh1i2	150	129	on	on	IN
cord-269353-wgeuh1i2	150	130	translational	translational	JJ
cord-269353-wgeuh1i2	150	131	efficiency	efficiency	NN
cord-269353-wgeuh1i2	150	132	of	of	IN
cord-269353-wgeuh1i2	150	133	mRNA	mrna	NN
cord-269353-wgeuh1i2	150	134	encoding	encode	VBG
cord-269353-wgeuh1i2	150	135	HIV-1	HIV-1	NNP
cord-269353-wgeuh1i2	150	136	gag	gag	NN
cord-269353-wgeuh1i2	150	137	in	in	IN
cord-269353-wgeuh1i2	150	138	intact	intact	JJ
cord-269353-wgeuh1i2	150	139	T	t	NN
cord-269353-wgeuh1i2	150	140	cells	cell	NNS
cord-269353-wgeuh1i2	151	1	Synonymous	synonymous	JJ
cord-269353-wgeuh1i2	151	2	but	but	CC
cord-269353-wgeuh1i2	151	3	not	not	RB
cord-269353-wgeuh1i2	151	4	the	the	DT
cord-269353-wgeuh1i2	151	5	same	same	JJ
cord-269353-wgeuh1i2	151	6	:	:	:
cord-269353-wgeuh1i2	152	1	the	the	DT
cord-269353-wgeuh1i2	152	2	causes	cause	NNS
cord-269353-wgeuh1i2	152	3	and	and	CC
cord-269353-wgeuh1i2	152	4	consequences	consequence	NNS
cord-269353-wgeuh1i2	152	5	of	of	IN
cord-269353-wgeuh1i2	152	6	codon	codon	NN
cord-269353-wgeuh1i2	152	7	bias	bias	NN
cord-269353-wgeuh1i2	152	8	OPTIMIZER	OPTIMIZER	NNP
cord-269353-wgeuh1i2	152	9	:	:	:
cord-269353-wgeuh1i2	152	10	a	a	DT
cord-269353-wgeuh1i2	152	11	web	web	NN
cord-269353-wgeuh1i2	152	12	server	server	NN
cord-269353-wgeuh1i2	152	13	for	for	IN
cord-269353-wgeuh1i2	152	14	optimizing	optimize	VBG
cord-269353-wgeuh1i2	152	15	the	the	DT
cord-269353-wgeuh1i2	152	16	codon	codon	NN
cord-269353-wgeuh1i2	152	17	usage	usage	NN
cord-269353-wgeuh1i2	152	18	of	of	IN
cord-269353-wgeuh1i2	152	19	DNA	dna	NN
cord-269353-wgeuh1i2	152	20	sequences	sequence	NNS
cord-269353-wgeuh1i2	152	21	Analysis	Analysis	NNP
cord-269353-wgeuh1i2	152	22	of	of	IN
cord-269353-wgeuh1i2	152	23	codon	codon	NN
cord-269353-wgeuh1i2	152	24	usage	usage	NN
cord-269353-wgeuh1i2	152	25	bias	bias	NN
cord-269353-wgeuh1i2	152	26	of	of	IN
cord-269353-wgeuh1i2	152	27	Crimean	Crimean	NNP
cord-269353-wgeuh1i2	152	28	-	-	HYPH
cord-269353-wgeuh1i2	152	29	Congo	Congo	NNP
cord-269353-wgeuh1i2	152	30	hemorrhagic	hemorrhagic	JJ
cord-269353-wgeuh1i2	152	31	fever	fever	NN
cord-269353-wgeuh1i2	152	32	virus	virus	NN
cord-269353-wgeuh1i2	152	33	and	and	CC
cord-269353-wgeuh1i2	152	34	its	-PRON-	PRP$
cord-269353-wgeuh1i2	152	35	adaptation	adaptation	NN
cord-269353-wgeuh1i2	152	36	to	to	IN
cord-269353-wgeuh1i2	152	37	hosts	host	NNS
cord-269353-wgeuh1i2	152	38	Evolutionary	evolutionary	JJ
cord-269353-wgeuh1i2	152	39	basis	basis	NN
cord-269353-wgeuh1i2	152	40	of	of	IN
cord-269353-wgeuh1i2	152	41	codon	codon	NN
cord-269353-wgeuh1i2	152	42	usage	usage	NN
cord-269353-wgeuh1i2	152	43	and	and	CC
cord-269353-wgeuh1i2	152	44	nucleotide	nucleotide	JJ
cord-269353-wgeuh1i2	152	45	composition	composition	NN
cord-269353-wgeuh1i2	152	46	bias	bias	NN
cord-269353-wgeuh1i2	152	47	in	in	IN
cord-269353-wgeuh1i2	152	48	vertebrate	vertebrate	JJ
cord-269353-wgeuh1i2	152	49	DNA	dna	NN
cord-269353-wgeuh1i2	152	50	viruses	virus	NNS
cord-269353-wgeuh1i2	152	51	Codon	Codon	NNP
cord-269353-wgeuh1i2	152	52	usage	usage	NN
cord-269353-wgeuh1i2	152	53	in	in	IN
cord-269353-wgeuh1i2	152	54	regulatory	regulatory	JJ
cord-269353-wgeuh1i2	152	55	genes	gene	NNS
cord-269353-wgeuh1i2	152	56	in	in	IN
cord-269353-wgeuh1i2	152	57	Escherichia	Escherichia	NNP
cord-269353-wgeuh1i2	152	58	coli	coli	NNS
cord-269353-wgeuh1i2	152	59	does	do	VBZ
cord-269353-wgeuh1i2	152	60	not	not	RB
cord-269353-wgeuh1i2	152	61	reflect	reflect	VB
cord-269353-wgeuh1i2	152	62	selection	selection	NN
cord-269353-wgeuh1i2	152	63	for	for	IN
cord-269353-wgeuh1i2	152	64	'	'	``
cord-269353-wgeuh1i2	152	65	rare	rare	JJ
cord-269353-wgeuh1i2	152	66	'	'	''
cord-269353-wgeuh1i2	152	67	codons	codon	NNS
cord-269353-wgeuh1i2	152	68	Host	host	NN
cord-269353-wgeuh1i2	152	69	influence	influence	NN
cord-269353-wgeuh1i2	152	70	in	in	IN
cord-269353-wgeuh1i2	152	71	the	the	DT
cord-269353-wgeuh1i2	152	72	genomic	genomic	JJ
cord-269353-wgeuh1i2	152	73	composition	composition	NN
cord-269353-wgeuh1i2	152	74	of	of	IN
cord-269353-wgeuh1i2	152	75	flaviviruses	flavivirus	NNS
cord-269353-wgeuh1i2	152	76	:	:	:
cord-269353-wgeuh1i2	152	77	a	a	DT
cord-269353-wgeuh1i2	152	78	multivariate	multivariate	JJ
cord-269353-wgeuh1i2	152	79	approach	approach	NN
cord-269353-wgeuh1i2	152	80	Characterization	characterization	NN
cord-269353-wgeuh1i2	152	81	of	of	IN
cord-269353-wgeuh1i2	152	82	codon	codon	NN
cord-269353-wgeuh1i2	152	83	usage	usage	NN
cord-269353-wgeuh1i2	152	84	pattern	pattern	NN
cord-269353-wgeuh1i2	152	85	and	and	CC
cord-269353-wgeuh1i2	152	86	influencing	influence	VBG
cord-269353-wgeuh1i2	152	87	factors	factor	NNS
cord-269353-wgeuh1i2	152	88	in	in	IN
cord-269353-wgeuh1i2	152	89	Japanese	japanese	JJ
cord-269353-wgeuh1i2	152	90	encephalitis	encephalitis	JJ
cord-269353-wgeuh1i2	152	91	virus	virus	NN
cord-269353-wgeuh1i2	152	92	Synonymous	synonymous	JJ
cord-269353-wgeuh1i2	152	93	codon	codon	NN
cord-269353-wgeuh1i2	152	94	usage	usage	NN
cord-269353-wgeuh1i2	152	95	in	in	IN
cord-269353-wgeuh1i2	152	96	Escherichia	Escherichia	NNP
cord-269353-wgeuh1i2	152	97	coli	coli	NNS
cord-269353-wgeuh1i2	152	98	:	:	:
cord-269353-wgeuh1i2	152	99	selection	selection	NN
cord-269353-wgeuh1i2	152	100	for	for	IN
cord-269353-wgeuh1i2	152	101	translational	translational	JJ
cord-269353-wgeuh1i2	152	102	accuracy	accuracy	NN
cord-269353-wgeuh1i2	153	1	Synonymous	synonymous	JJ
cord-269353-wgeuh1i2	153	2	codon	codon	NN
cord-269353-wgeuh1i2	153	3	usage	usage	NN
cord-269353-wgeuh1i2	153	4	analysis	analysis	NN
cord-269353-wgeuh1i2	153	5	of	of	IN
cord-269353-wgeuh1i2	153	6	hand	hand	NN
cord-269353-wgeuh1i2	153	7	,	,	,
cord-269353-wgeuh1i2	153	8	foot	foot	NN
cord-269353-wgeuh1i2	153	9	and	and	CC
cord-269353-wgeuh1i2	153	10	mouth	mouth	NN
cord-269353-wgeuh1i2	153	11	disease	disease	NN
cord-269353-wgeuh1i2	153	12	viruses	virus	NNS
cord-269353-wgeuh1i2	153	13	:	:	:
cord-269353-wgeuh1i2	153	14	a	a	DT
cord-269353-wgeuh1i2	153	15	comparative	comparative	JJ
cord-269353-wgeuh1i2	153	16	study	study	NN
cord-269353-wgeuh1i2	153	17	on	on	IN
cord-269353-wgeuh1i2	153	18	coxsackievirus	coxsackievirus	NNP
cord-269353-wgeuh1i2	153	19	A6	A6	NNP
cord-269353-wgeuh1i2	153	20	,	,	,
cord-269353-wgeuh1i2	153	21	A10	A10	NNP
cord-269353-wgeuh1i2	153	22	,	,	,
cord-269353-wgeuh1i2	153	23	A16	A16	NNP
cord-269353-wgeuh1i2	153	24	,	,	,
cord-269353-wgeuh1i2	153	25	and	and	CC
cord-269353-wgeuh1i2	153	26	enterovirus	enterovirus	NN
cord-269353-wgeuh1i2	153	27	71	71	CD
cord-269353-wgeuh1i2	153	28	from	from	IN
cord-269353-wgeuh1i2	153	29	Analysis	Analysis	NNP
cord-269353-wgeuh1i2	153	30	of	of	IN
cord-269353-wgeuh1i2	153	31	codon	codon	NN
cord-269353-wgeuh1i2	153	32	usage	usage	NN
cord-269353-wgeuh1i2	153	33	bias	bias	NN
cord-269353-wgeuh1i2	153	34	and	and	CC
cord-269353-wgeuh1i2	153	35	base	base	JJ
cord-269353-wgeuh1i2	153	36	compositional	compositional	JJ
cord-269353-wgeuh1i2	153	37	constraints	constraint	NNS
cord-269353-wgeuh1i2	153	38	in	in	IN
cord-269353-wgeuh1i2	153	39	iridovirus	iridovirus	NNP
cord-269353-wgeuh1i2	153	40	genomes	genome	NNS
cord-269353-wgeuh1i2	153	41	Analysis	Analysis	NNP
cord-269353-wgeuh1i2	153	42	of	of	IN
cord-269353-wgeuh1i2	153	43	codon	codon	NN
cord-269353-wgeuh1i2	153	44	usage	usage	NN
cord-269353-wgeuh1i2	153	45	in	in	IN
cord-269353-wgeuh1i2	153	46	Newcastle	Newcastle	NNP
cord-269353-wgeuh1i2	153	47	disease	disease	NN
cord-269353-wgeuh1i2	153	48	virus	virus	NN
cord-269353-wgeuh1i2	153	49	Codon	Codon	NNP
cord-269353-wgeuh1i2	153	50	usage	usage	NN
cord-269353-wgeuh1i2	153	51	bias	bias	NN
cord-269353-wgeuh1i2	153	52	and	and	CC
cord-269353-wgeuh1i2	153	53	the	the	DT
cord-269353-wgeuh1i2	153	54	evolution	evolution	NN
cord-269353-wgeuh1i2	153	55	of	of	IN
cord-269353-wgeuh1i2	153	56	influenza	influenza	NN
cord-269353-wgeuh1i2	153	57	A	a	DT
cord-269353-wgeuh1i2	153	58	viruses	virus	NNS
cord-269353-wgeuh1i2	153	59	.	.	.
cord-269353-wgeuh1i2	154	1	Codon	codon	NN
cord-269353-wgeuh1i2	154	2	usage	usage	NN
cord-269353-wgeuh1i2	154	3	biases	bias	NNS
cord-269353-wgeuh1i2	154	4	of	of	IN
cord-269353-wgeuh1i2	154	5	influenza	influenza	NN
cord-269353-wgeuh1i2	154	6	virus	virus	NN
cord-269353-wgeuh1i2	155	1	The	the	DT
cord-269353-wgeuh1i2	155	2	'	'	``
cord-269353-wgeuh1i2	155	3	effective	effective	JJ
cord-269353-wgeuh1i2	155	4	number	number	NN
cord-269353-wgeuh1i2	155	5	of	of	IN
cord-269353-wgeuh1i2	155	6	codons	codon	NNS
cord-269353-wgeuh1i2	155	7	'	'	POS
cord-269353-wgeuh1i2	155	8	used	use	VBN
cord-269353-wgeuh1i2	155	9	in	in	IN
cord-269353-wgeuh1i2	155	10	a	a	DT
cord-269353-wgeuh1i2	155	11	gene	gene	NN
cord-269353-wgeuh1i2	155	12	Comparative	comparative	JJ
cord-269353-wgeuh1i2	155	13	characterization	characterization	NN
cord-269353-wgeuh1i2	155	14	analysis	analysis	NN
cord-269353-wgeuh1i2	155	15	of	of	IN
cord-269353-wgeuh1i2	155	16	synonymous	synonymous	JJ
cord-269353-wgeuh1i2	155	17	codon	codon	NN
cord-269353-wgeuh1i2	155	18	usage	usage	NN
cord-269353-wgeuh1i2	155	19	bias	bias	NN
cord-269353-wgeuh1i2	155	20	in	in	IN
cord-269353-wgeuh1i2	155	21	classical	classical	JJ
cord-269353-wgeuh1i2	155	22	swine	swine	NN
cord-269353-wgeuh1i2	155	23	fever	fever	NN
cord-269353-wgeuh1i2	155	24	virus	virus	NN
cord-269353-wgeuh1i2	155	25	Analysis	Analysis	NNP
cord-269353-wgeuh1i2	155	26	of	of	IN
cord-269353-wgeuh1i2	155	27	the	the	DT
cord-269353-wgeuh1i2	155	28	codon	codon	NN
cord-269353-wgeuh1i2	155	29	usage	usage	NN
cord-269353-wgeuh1i2	155	30	of	of	IN
cord-269353-wgeuh1i2	155	31	the	the	DT
cord-269353-wgeuh1i2	155	32	ORF2	ORF2	NNP
cord-269353-wgeuh1i2	155	33	gene	gene	NN
cord-269353-wgeuh1i2	155	34	of	of	IN
cord-269353-wgeuh1i2	155	35	feline	feline	JJ
cord-269353-wgeuh1i2	155	36	calicivirus	calicivirus	NNP
cord-269353-wgeuh1i2	155	37	Analysis	Analysis	NNP
cord-269353-wgeuh1i2	155	38	of	of	IN
cord-269353-wgeuh1i2	155	39	codon	codon	NN
cord-269353-wgeuh1i2	155	40	usage	usage	NN
cord-269353-wgeuh1i2	155	41	bias	bias	NN
cord-269353-wgeuh1i2	155	42	of	of	IN
cord-269353-wgeuh1i2	155	43	envelope	envelope	NN
cord-269353-wgeuh1i2	155	44	glycoprotein	glycoprotein	NN
cord-269353-wgeuh1i2	155	45	genes	gene	NNS
cord-269353-wgeuh1i2	155	46	in	in	IN
cord-269353-wgeuh1i2	155	47	nuclear	nuclear	JJ
cord-269353-wgeuh1i2	155	48	polyhedrosis	polyhedrosis	NN
cord-269353-wgeuh1i2	155	49	virus	virus	NN
cord-269353-wgeuh1i2	155	50	(	(	-LRB-
cord-269353-wgeuh1i2	155	51	NPV	NPV	NNP
cord-269353-wgeuh1i2	155	52	)	)	-RRB-
cord-269353-wgeuh1i2	155	53	and	and	CC
cord-269353-wgeuh1i2	155	54	its	-PRON-	PRP$
cord-269353-wgeuh1i2	155	55	relation	relation	NN
cord-269353-wgeuh1i2	155	56	to	to	IN
cord-269353-wgeuh1i2	155	57	evolution	evolution	NN
cord-269353-wgeuh1i2	156	1	The	the	DT
cord-269353-wgeuh1i2	156	2	distribution	distribution	NN
cord-269353-wgeuh1i2	156	3	of	of	IN
cord-269353-wgeuh1i2	156	4	synonymous	synonymous	JJ
cord-269353-wgeuh1i2	156	5	codon	codon	NN
cord-269353-wgeuh1i2	156	6	choice	choice	NN
cord-269353-wgeuh1i2	156	7	in	in	IN
cord-269353-wgeuh1i2	156	8	the	the	DT
cord-269353-wgeuh1i2	156	9	translation	translation	NN
cord-269353-wgeuh1i2	156	10	initiation	initiation	NN
cord-269353-wgeuh1i2	156	11	region	region	NN
cord-269353-wgeuh1i2	156	12	of	of	IN
cord-269353-wgeuh1i2	156	13	dengue	dengue	NN
cord-269353-wgeuh1i2	156	14	virus	virus	NN
cord-269353-wgeuh1i2	156	15	Codon	Codon	NNP
cord-269353-wgeuh1i2	156	16	usage	usage	NN
cord-269353-wgeuh1i2	156	17	is	be	VBZ
cord-269353-wgeuh1i2	156	18	an	an	DT
cord-269353-wgeuh1i2	156	19	important	important	JJ
cord-269353-wgeuh1i2	156	20	determinant	determinant	NN
cord-269353-wgeuh1i2	156	21	of	of	IN
cord-269353-wgeuh1i2	156	22	gene	gene	NN
cord-269353-wgeuh1i2	156	23	expression	expression	NN
cord-269353-wgeuh1i2	156	24	levels	level	NNS
cord-269353-wgeuh1i2	156	25	largely	largely	RB
cord-269353-wgeuh1i2	156	26	through	through	IN
cord-269353-wgeuh1i2	156	27	its	-PRON-	PRP$
cord-269353-wgeuh1i2	156	28	effects	effect	NNS
cord-269353-wgeuh1i2	156	29	on	on	IN
cord-269353-wgeuh1i2	156	30	transcription	transcription	NN
cord-269353-wgeuh1i2	157	1	This	this	DT
cord-269353-wgeuh1i2	157	2	work	work	NN
cord-269353-wgeuh1i2	157	3	was	be	VBD
cord-269353-wgeuh1i2	157	4	supported	support	VBN
cord-269353-wgeuh1i2	157	5	by	by	IN
cord-269353-wgeuh1i2	157	6	Guangdong	Guangdong	NNP
cord-269353-wgeuh1i2	157	7	Natural	Natural	NNP
cord-269353-wgeuh1i2	157	8	Science	Science	NNP
cord-269353-wgeuh1i2	157	9	Funds	Funds	NNPS
cord-269353-wgeuh1i2	157	10	for	for	IN
cord-269353-wgeuh1i2	157	11	Distinguished	Distinguished	NNP
cord-269353-wgeuh1i2	157	12	Young	Young	NNP
cord-269353-wgeuh1i2	157	13	Scholar	scholar	NN
cord-269353-wgeuh1i2	157	14	(	(	-LRB-
cord-269353-wgeuh1i2	157	15	2014A030306046	2014a030306046	CD
cord-269353-wgeuh1i2	157	16	)	)	-RRB-
cord-269353-wgeuh1i2	157	17	.	.	.