id	author	title	date	pages	extension	mime	words	sentences	flesch	summary	cache	txt
cord-343944-nm4dx5pq	Theys, Kristof	Advances in Visualization Tools for Phylogenomic and Phylodynamic Studies of Viral Diseases	2019-08-02		.txt	text/plain	9591	377	29	As a first example, we illustrate the development of innovative visualization software packages on the output of a Bayesian phylodynamic analysis of a rabies virus (RABV) data set consisting of time-stamped genetic data along with two discrete trait characteristics per sequence, i.e., the sampling location-in this case the state within the United States from which the sample originated-and the bat host type. Coalescent-based phylodynamic models that connect population genetics theory to genomic data can infer the demographic history of viral populations (65) , and plots of FIGURE 4 | The PhyloGeoTool offers a visual approach to explore large phylogenetic trees and to depict characteristics of strains and clades-including for example the geographic context and distribution of sampling dates-in an interactive way (17) .	./cache/cord-343944-nm4dx5pq.txt	./txt/cord-343944-nm4dx5pq.txt