[PDF] Expanding the TRANSFAC database towards an expert system of regulatory molecular mechanisms | Semantic Scholar Skip to search formSkip to main content> Semantic Scholar's Logo Search Sign InCreate Free Account You are currently offline. Some features of the site may not work correctly. DOI:10.1093/nar/27.1.318 Corpus ID: 18774013Expanding the TRANSFAC database towards an expert system of regulatory molecular mechanisms @article{Heinemeyer1999ExpandingTT, title={Expanding the TRANSFAC database towards an expert system of regulatory molecular mechanisms}, author={T. Heinemeyer and X. Chen and H. Karas and A. Kel and O. Kel-Margoulis and I. Liebich and T. Meinhardt and I. Reuter and F. Schacherer and E. Wingender}, journal={Nucleic acids research}, year={1999}, volume={27 1}, pages={ 318-22 } } T. Heinemeyer, X. Chen, +7 authors E. Wingender Published 1999 Biology, Medicine, Computer Science Nucleic acids research TRANSFAC is a database on transcription factors, their genomic binding sites and DNA-binding profiles. In addition to being updated and extended by new features, it has been complemented now by a series of additional database modules. Among them, modules which provide data about signal transduction pathways (TRANSPATH) or about cell types/organs/developmental stages (CYTOMER) are available as well as an updated version of the previously described COMPEL database. The databases are available on… Expand View on PubMed academic.oup.com Save to Library Create Alert Cite Launch Research Feed Share This Paper 313 CitationsHighly Influential Citations 25 Background Citations 55 Methods Citations 79 View All Figures, Tables, and Topics from this paper table 1 figure 1 table 2 figure 2 table 3 View All 5 Figures & Tables Expert system Database Transduction (machine learning) TRANSCRIPTION FACTOR Organ Transcription (software) WWW 313 Citations Citation Type Citation Type All Types Cites Results Cites Methods Cites Background Has PDF Publication Type Author More Filters More Filters Filters Sort by Relevance Sort by Most Influenced Papers Sort by Citation Count Sort by Recency The TRANSFAC system on gene expression regulation E. Wingender, X. Chen, +11 authors S. Urbach Medicine, Computer Science Nucleic Acids Res. 2001 694 PDF Save Alert Research Feed Modeling regulatory pathways with the use of the TRANSFAC system E. Wingender Biology 2002 2 Save Alert Research Feed TRANSFAC®: transcriptional regulation, from patterns to profiles V. Matys, Ellen Fricke, +18 authors E. Wingender Medicine, Computer Science Nucleic Acids Res. 2003 2,094 PDF Save Alert Research Feed The Eukaryotic Promoter Database (EPD): recent developments Rouaïda Périer, Thomas Junier, C. Bonnard, P. Bucher Computer Science, Medicine Nucleic Acids Res. 1999 40 PDF Save Alert Research Feed TRANSCompel®: a database on composite regulatory elements in eukaryotic genes O. Kel-Margoulis, A. Kel, I. Reuter, I. Deineko, E. Wingender Computer Science, Medicine Nucleic Acids Res. 2002 137 PDF Save Alert Research Feed Discovery and modeling of transcriptional regulatory regions. J. Fickett, W. Wasserman Biology, Medicine Current opinion in biotechnology 2000 169 Save Alert Research Feed Pathway Databases J. Wixon Biology, Medicine Comparative and functional genomics 2001 35 View 2 excerpts, cites background Save Alert Research Feed TFBScluster: a resource for the characterization of transcriptional regulatory networks I. Donaldson, M. Chapman, B. Göttgens Biology, Medicine Bioinform. 2005 30 PDF Save Alert Research Feed The TRANSFAC project as an example of framework technology that supports the analysis of genomic regulation E. Wingender Biology, Medicine Briefings Bioinform. 2008 381 PDF View 1 excerpt, cites background Save Alert Research Feed TFBScluster web server for the identification of mammalian composite regulatory elements I. Donaldson, B. Göttgens Biology, Computer Science Nucleic Acids Res. 2006 10 Highly Influenced PDF View 4 excerpts, cites methods Save Alert Research Feed ... 1 2 3 4 5 ... References SHOWING 1-10 OF 33 REFERENCES SORT BYRelevance Most Influenced Papers Recency Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL T. Heinemeyer, E. 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Davies Biology, Medicine Mechanisms of Development 1994 80 Save Alert Research Feed SRS: information retrieval system for molecular biology data banks. T. Etzold, A. Ulyanov, P. Argos Computer Science, Medicine Methods in enzymology 1996 495 Save Alert Research Feed ... 1 2 3 4 ... Related Papers Abstract Figures, Tables, and Topics 313 Citations 33 References Related Papers Stay Connected With Semantic Scholar Sign Up About Semantic Scholar Semantic Scholar is a free, AI-powered research tool for scientific literature, based at the Allen Institute for AI. Learn More → Resources DatasetsSupp.aiAPIOpen Corpus Organization About UsResearchPublishing PartnersData Partners   FAQContact Proudly built by AI2 with the help of our Collaborators Terms of Service•Privacy Policy The Allen Institute for AI By clicking accept or continuing to use the site, you agree to the terms outlined in our Privacy Policy, Terms of Service, and Dataset License ACCEPT & CONTINUE