mv: ‘./input-file.zip’ and ‘./input-file.zip’ are the same file Creating study carrel named classification-QM-gutenberg Initializing database Unzipping Archive: input-file.zip creating: ./tmp/input/input-file/ inflating: ./tmp/input/input-file/37385.txt inflating: ./tmp/input/input-file/58460.txt inflating: ./tmp/input/input-file/24440.txt inflating: ./tmp/input/input-file/36003.txt inflating: ./tmp/input/input-file/metadata.csv caution: excluded filename not matched: *MACOSX* === DIRECTORIES: ./tmp/input === DIRECTORY: ./tmp/input/input-file === metadata file: ./tmp/input/input-file/metadata.csv === found metadata file === updating bibliographic database Building study carrel named classification-QM-gutenberg FILE: cache/58460.txt OUTPUT: txt/58460.txt FILE: cache/24440.txt OUTPUT: txt/24440.txt FILE: cache/37385.txt OUTPUT: txt/37385.txt FILE: cache/36003.txt OUTPUT: txt/36003.txt === file2bib.sh === id: 24440 author: Maclise, Joseph title: Surgical Anatomy date: pages: extension: .txt txt: ./txt/24440.txt cache: ./cache/24440.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 1 resourceName b'24440.txt' Traceback (most recent call last): File "/data-disk/reader-compute/reader-classic/bin/file2bib.py", line 107, in text = textacy.preprocessing.normalize.normalize_quotation_marks( text ) File "/data-disk/python/lib/python3.8/site-packages/textacy/preprocessing/normalize.py", line 32, in normalize_quotation_marks return text.translate(QUOTE_TRANSLATION_TABLE) AttributeError: 'NoneType' object has no attribute 'translate' 24440 txt/../ent/24440.ent 24440 txt/../wrd/24440.wrd Traceback (most recent call last): File "/data-disk/reader-compute/reader-classic/bin/txt2keywords.py", line 54, in for keyword, score in ( yake( doc, ngrams=NGRAMS, topn=TOPN ) ) : File "/data-disk/python/lib/python3.8/site-packages/textacy/ke/yake.py", line 96, in yake word_scores = _compute_word_scores(doc, word_occ_vals, word_freqs, stop_words) File "/data-disk/python/lib/python3.8/site-packages/textacy/ke/yake.py", line 205, in _compute_word_scores freq_baseline = statistics.mean(freqs_nsw) + statistics.stdev(freqs_nsw) File "/data-disk/python/lib/python3.8/statistics.py", line 315, in mean raise StatisticsError('mean requires at least one data point') statistics.StatisticsError: mean requires at least one data point 24440 txt/../pos/24440.pos 58460 txt/../ent/58460.ent 58460 txt/../pos/58460.pos 58460 txt/../wrd/58460.wrd 37385 txt/../ent/37385.ent 37385 txt/../pos/37385.pos 37385 txt/../wrd/37385.wrd === file2bib.sh === id: 58460 author: Smith, Southwood title: Use of the Dead to the Living date: pages: extension: .txt txt: ./txt/58460.txt cache: ./cache/58460.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 2 resourceName b'58460.txt' === file2bib.sh === id: 37385 author: Leighton, Gerald R. (Gerald Rowley) title: Embryology: The Beginnings of Life date: pages: extension: .txt txt: ./txt/37385.txt cache: ./cache/37385.txt Content-Encoding ISO-8859-1 Content-Type text/plain; charset=ISO-8859-1 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 3 resourceName b'37385.txt' 36003 txt/../pos/36003.pos 36003 txt/../wrd/36003.wrd 36003 txt/../ent/36003.ent === file2bib.sh === id: 36003 author: Talbot, Eugene S. (Eugene Solomon) title: Degeneracy: Its Causes, Signs and Results date: pages: extension: .txt txt: ./txt/36003.txt cache: ./cache/36003.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 X-Parsed-By ['org.apache.tika.parser.DefaultParser', 'org.apache.tika.parser.csv.TextAndCSVParser'] X-TIKA:content_handler ToTextContentHandler X-TIKA:embedded_depth 0 X-TIKA:parse_time_millis 8 resourceName b'36003.txt' Done mapping. Reducing classification-QM-gutenberg === reduce.pl bib === id = 37385 author = Leighton, Gerald R. (Gerald Rowley) title = Embryology: The Beginnings of Life date = pages = extension = .txt mime = text/plain words = 21612 sentences = 945 flesch = 63 summary = grasp these simple facts of cell life in their bearing upon development cell is termed, in animal Embryology, the "fertilised ovum." It is fertilised ovum there are produced first of all germ-cells to secure the gave rise to the cells which ultimately produced an embryo. resemble parents and ancestors is because the germ-cells which give rise [Illustration: Diagram to show the origin of germ-cells and the embryo.] body-cells, and so produces the new individual, which as it grows continuity by successive generations of germ-cells from time immemorial. different lines of descent of the male and female germ-cells may well be the fact that human germ-cells have been subject to the hostile germ-cell, the rest of these products forming the other body tissues. embryo, and no individual, ever made germ-cells; the latter existed constitutes the environment of an embryo that the mass of body-cells developing embryo, and take no part in the actual formation of its cells cache = ./cache/37385.txt txt = ./txt/37385.txt === reduce.pl bib === id = 36003 author = Talbot, Eugene S. (Eugene Solomon) title = Degeneracy: Its Causes, Signs and Results date = pages = extension = .txt mime = text/plain words = 93701 sentences = 6166 flesch = 63 summary = DEGENERATE FACE AND ARREST OF LOWER JAW (Original) 187 some cases a condition of inherent defect born in the individual, and not degeneracy may be an expression of general advance and local defect or may all these periods degeneracy may be shown by mental or physical defect, a given, those of the face, jaws, and teeth; ear, eye, cranium; body, bodily The factors producing degeneration act by causing nervous exhaustion in constitutional diseases, arrested development of the face at this point race type is evidence of degeneracy, erroneously cites in illustration cases skull injury to the father had like results on both mother and mal-development shown to occur in animals by Charrin and Gley, and in man of the part that normal development in many cases thereby results. The conditions resultant on checked development may appear in any of the case, a man of 38, had a face arrested in development and the appearance cache = ./cache/36003.txt txt = ./txt/36003.txt === reduce.pl bib === id = 58460 author = Smith, Southwood title = Use of the Dead to the Living date = pages = extension = .txt mime = text/plain words = 18060 sentences = 628 flesch = 56 summary = of affording Dead Bodies to the Schools of Anatomy, by Legislative The most important diseases have their seat in the organs of the body; extent to which anatomical knowledge is the means of saving human life. opening the body (for the man lived only ten days after Pelletan first means of which she performs all her operations in the bodies of animals, received by the pores, the body remains in its natural state: that, on world by the public dissection of two human bodies. lawful, in point of conscience, to dissect a dead body in order to learn felony, to dig up or remove a dead human body with intent to dissect operations must be performed, medical men must be educated, anatomy must anatomy, on receiving dead bodies from the hospitals, infirmaries, shall be allowed to gain knowledge by operating on the bodies of the cache = ./cache/58460.txt txt = ./txt/58460.txt === reduce.pl bib === Building ./etc/reader.txt 36003 37385 58460 36003 37385 58460 number of items: 4 sum of words: 133,373 average size in words: 44,457 average readability score: 60 nouns: development; degeneracy; cells; life; brain; children; man; teeth; body; embryo; cases; part; type; illustration; case; disease; germ; conditions; time; face; individual; blood; race; condition; fig; bones; head; system; fact; child; cell; parents; evolution; years; organs; offspring; heredity; side; number; influence; growth; place; others; family; results; tendency; state; eye; stage; jaw verbs: is; are; be; has; was; have; been; were; had; found; being; shown; produced; do; born; made; occur; called; occurs; developed; does; show; become; form; becomes; produce; taken; inherited; associated; take; observed; seen; given; following; give; acquired; according; said; result; pointed; known; takes; produces; having; arrested; appear; shows; see; come; termed adjectives: other; such; great; same; nervous; many; first; human; certain; lower; mental; general; normal; present; large; due; similar; common; moral; more; new; important; embryonic; small; second; true; physical; different; whole; own; hereditary; higher; upper; third; little; various; single; early; much; greater; cerebral; possible; healthy; female; spinal; simple; old; last; insane; defective adverbs: not; so; very; more; only; most; often; even; as; also; well; thus; however; therefore; out; still; frequently; now; less; here; too; then; much; especially; up; sometimes; hence; far; first; never; together; long; already; nearly; almost; generally; always; later; usually; quite; down; entirely; ultimately; just; on; merely; finally; alone; about; ago pronouns: it; they; their; its; his; he; we; them; itself; her; themselves; him; our; she; i; my; himself; us; you; one; me; your; herself; yourself; thy; theirs; sport; ourselves; myself; mine proper nouns: _; fig; |; c.; journal; dr.; medical; new; degeneracy; 6d; w.; germ; j.; chicago; vol; kiernan; h.; american; b.; de; g.; e.; york; states; s.; morel; english; degenerate; f.; united; t.; spitzka; disease; london; england; mental; life; insanity; cloth; st.; .; darwin; brain; weismann; professor; p.; man; m.; school; nervous keywords: man; development; case; york; united; type; tooth; surgeon; states; spitzka; original; operation; new; morel; mental; medical; life; knowledge; kiernan; journal; insanity; individual; illustration; great; germ; fig; face; embryology; embryo; edinburgh; dr.; disease; degeneracy; condition; child; chicago; cell; brain; body; beginning; anatomy; american one topic; one dimension: development file(s): ./cache/58460.txt titles(s): Use of the Dead to the Living three topics; one dimension: degeneracy; cells; anatomy file(s): ./cache/36003.txt, ./cache/37385.txt, ./cache/58460.txt titles(s): Degeneracy: Its Causes, Signs and Results | Embryology: The Beginnings of Life | Use of the Dead to the Living five topics; three dimensions: degeneracy development fig; cells embryo germ; anatomy disease operation; earnest repetition vague; earnest repetition vague file(s): ./cache/36003.txt, ./cache/37385.txt, ./cache/58460.txt, , titles(s): Degeneracy: Its Causes, Signs and Results | Embryology: The Beginnings of Life | Use of the Dead to the Living | Surgical Anatomy | Surgical Anatomy Type: gutenberg title: classification-QM-gutenberg date: 2021-05-28 time: 15:05 username: emorgan patron: Eric Morgan email: emorgan@nd.edu input: classification:"QM" ==== make-pages.sh htm files ==== make-pages.sh complex files ==== make-pages.sh named enities ==== making bibliographics id: 37385 author: Leighton, Gerald R. (Gerald Rowley) title: Embryology: The Beginnings of Life date: words: 21612.0 sentences: 945.0 pages: flesch: 63.0 cache: ./cache/37385.txt txt: ./txt/37385.txt summary: grasp these simple facts of cell life in their bearing upon development cell is termed, in animal Embryology, the "fertilised ovum." It is fertilised ovum there are produced first of all germ-cells to secure the gave rise to the cells which ultimately produced an embryo. resemble parents and ancestors is because the germ-cells which give rise [Illustration: Diagram to show the origin of germ-cells and the embryo.] body-cells, and so produces the new individual, which as it grows continuity by successive generations of germ-cells from time immemorial. different lines of descent of the male and female germ-cells may well be the fact that human germ-cells have been subject to the hostile germ-cell, the rest of these products forming the other body tissues. embryo, and no individual, ever made germ-cells; the latter existed constitutes the environment of an embryo that the mass of body-cells developing embryo, and take no part in the actual formation of its cells id: 24440 author: Maclise, Joseph title: Surgical Anatomy date: words: nan sentences: nan pages: flesch: nan cache: txt: summary: id: 58460 author: Smith, Southwood title: Use of the Dead to the Living date: words: 18060.0 sentences: 628.0 pages: flesch: 56.0 cache: ./cache/58460.txt txt: ./txt/58460.txt summary: of affording Dead Bodies to the Schools of Anatomy, by Legislative The most important diseases have their seat in the organs of the body; extent to which anatomical knowledge is the means of saving human life. opening the body (for the man lived only ten days after Pelletan first means of which she performs all her operations in the bodies of animals, received by the pores, the body remains in its natural state: that, on world by the public dissection of two human bodies. lawful, in point of conscience, to dissect a dead body in order to learn felony, to dig up or remove a dead human body with intent to dissect operations must be performed, medical men must be educated, anatomy must anatomy, on receiving dead bodies from the hospitals, infirmaries, shall be allowed to gain knowledge by operating on the bodies of the id: 36003 author: Talbot, Eugene S. (Eugene Solomon) title: Degeneracy: Its Causes, Signs and Results date: words: 93701.0 sentences: 6166.0 pages: flesch: 63.0 cache: ./cache/36003.txt txt: ./txt/36003.txt summary: DEGENERATE FACE AND ARREST OF LOWER JAW (Original) 187 some cases a condition of inherent defect born in the individual, and not degeneracy may be an expression of general advance and local defect or may all these periods degeneracy may be shown by mental or physical defect, a given, those of the face, jaws, and teeth; ear, eye, cranium; body, bodily The factors producing degeneration act by causing nervous exhaustion in constitutional diseases, arrested development of the face at this point race type is evidence of degeneracy, erroneously cites in illustration cases skull injury to the father had like results on both mother and mal-development shown to occur in animals by Charrin and Gley, and in man of the part that normal development in many cases thereby results. The conditions resultant on checked development may appear in any of the case, a man of 38, had a face arrested in development and the appearance ==== make-pages.sh questions ==== make-pages.sh search ==== make-pages.sh topic modeling corpus Zipping study carrel