id sid tid token lemma pos 10_1101-2020_09_09_289074 1 1 Structural Structural NNP 10_1101-2020_09_09_289074 1 2 Genetics Genetics NNP 10_1101-2020_09_09_289074 1 3 of of IN 10_1101-2020_09_09_289074 1 4 circulating circulate VBG 10_1101-2020_09_09_289074 1 5 variants variant NNS 10_1101-2020_09_09_289074 1 6 affecting affect VBG 10_1101-2020_09_09_289074 1 7 the the DT 10_1101-2020_09_09_289074 1 8 SARS SARS NNP 10_1101-2020_09_09_289074 1 9 - - HYPH 10_1101-2020_09_09_289074 1 10 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 1 11 Spike Spike NNP 10_1101-2020_09_09_289074 1 12 / / SYM 10_1101-2020_09_09_289074 1 13 human human JJ 10_1101-2020_09_09_289074 1 14 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 1 15 complex complex NN 10_1101-2020_09_09_289074 1 16 1 1 CD 10_1101-2020_09_09_289074 1 17 Structural Structural NNP 10_1101-2020_09_09_289074 1 18 Genetics Genetics NNPS 10_1101-2020_09_09_289074 1 19 of of IN 10_1101-2020_09_09_289074 1 20 circulating circulate VBG 10_1101-2020_09_09_289074 1 21 variants variant NNS 10_1101-2020_09_09_289074 1 22 affecting affect VBG 10_1101-2020_09_09_289074 1 23 the the DT 10_1101-2020_09_09_289074 1 24 SARS SARS NNP 10_1101-2020_09_09_289074 1 25 - - HYPH 10_1101-2020_09_09_289074 1 26 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 1 27 Spike Spike NNP 10_1101-2020_09_09_289074 1 28 / / SYM 10_1101-2020_09_09_289074 1 29 human human JJ 10_1101-2020_09_09_289074 1 30 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 1 31 complex complex JJ 10_1101-2020_09_09_289074 1 32 Francesco Francesco NNP 10_1101-2020_09_09_289074 1 33 Ortuso1,2 ortuso1,2 CD 10_1101-2020_09_09_289074 1 34 , , , 10_1101-2020_09_09_289074 1 35 Daniele Daniele NNP 10_1101-2020_09_09_289074 1 36 Mercatelli3 Mercatelli3 NNP 10_1101-2020_09_09_289074 1 37 , , , 10_1101-2020_09_09_289074 1 38 Pietro Pietro NNP 10_1101-2020_09_09_289074 1 39 Hiram Hiram NNP 10_1101-2020_09_09_289074 1 40 Guzzi4 Guzzi4 NNP 10_1101-2020_09_09_289074 1 41 , , , 10_1101-2020_09_09_289074 1 42 Federico Federico NNP 10_1101-2020_09_09_289074 1 43 Manuel Manuel NNP 10_1101-2020_09_09_289074 1 44 Giorgi3 Giorgi3 NNP 10_1101-2020_09_09_289074 1 45 , , , 10_1101-2020_09_09_289074 1 46 * * NFP 10_1101-2020_09_09_289074 1 47 1 1 CD 10_1101-2020_09_09_289074 1 48 Department Department NNP 10_1101-2020_09_09_289074 1 49 of of IN 10_1101-2020_09_09_289074 1 50 Health Health NNP 10_1101-2020_09_09_289074 1 51 Sciences Sciences NNPS 10_1101-2020_09_09_289074 1 52 , , , 10_1101-2020_09_09_289074 1 53 University University NNP 10_1101-2020_09_09_289074 1 54 “ " `` 10_1101-2020_09_09_289074 1 55 Magna Magna NNPS 10_1101-2020_09_09_289074 1 56 Græcia Græcia NNP 10_1101-2020_09_09_289074 1 57 ” " '' 10_1101-2020_09_09_289074 1 58 of of IN 10_1101-2020_09_09_289074 1 59 Catanzaro Catanzaro NNP 10_1101-2020_09_09_289074 1 60 , , , 10_1101-2020_09_09_289074 1 61 Catanzaro Catanzaro NNP 10_1101-2020_09_09_289074 1 62 , , , 10_1101-2020_09_09_289074 1 63 Italy Italy NNP 10_1101-2020_09_09_289074 1 64 2 2 CD 10_1101-2020_09_09_289074 1 65 Net4Science Net4Science NNP 10_1101-2020_09_09_289074 1 66 srl srl NN 10_1101-2020_09_09_289074 1 67 , , , 10_1101-2020_09_09_289074 1 68 c c NN 10_1101-2020_09_09_289074 1 69 / / SYM 10_1101-2020_09_09_289074 1 70 o o NNP 10_1101-2020_09_09_289074 1 71 University University NNP 10_1101-2020_09_09_289074 1 72 “ " `` 10_1101-2020_09_09_289074 1 73 Magna Magna NNPS 10_1101-2020_09_09_289074 1 74 Græcia Græcia NNP 10_1101-2020_09_09_289074 1 75 ” " '' 10_1101-2020_09_09_289074 1 76 of of IN 10_1101-2020_09_09_289074 1 77 Catanzaro Catanzaro NNP 10_1101-2020_09_09_289074 1 78 , , , 10_1101-2020_09_09_289074 1 79 Catanzaro Catanzaro NNP 10_1101-2020_09_09_289074 1 80 , , , 10_1101-2020_09_09_289074 1 81 Italy Italy NNP 10_1101-2020_09_09_289074 1 82 3 3 CD 10_1101-2020_09_09_289074 1 83 Department Department NNP 10_1101-2020_09_09_289074 1 84 of of IN 10_1101-2020_09_09_289074 1 85 Pharmacy Pharmacy NNP 10_1101-2020_09_09_289074 1 86 and and CC 10_1101-2020_09_09_289074 1 87 Biotechnology Biotechnology NNP 10_1101-2020_09_09_289074 1 88 , , , 10_1101-2020_09_09_289074 1 89 University University NNP 10_1101-2020_09_09_289074 1 90 of of IN 10_1101-2020_09_09_289074 1 91 Bologna Bologna NNPS 10_1101-2020_09_09_289074 1 92 , , , 10_1101-2020_09_09_289074 1 93 Bologna Bologna NNPS 10_1101-2020_09_09_289074 1 94 , , , 10_1101-2020_09_09_289074 1 95 Italy Italy NNP 10_1101-2020_09_09_289074 1 96 4 4 CD 10_1101-2020_09_09_289074 1 97 Department Department NNP 10_1101-2020_09_09_289074 1 98 of of IN 10_1101-2020_09_09_289074 1 99 Surgical Surgical NNP 10_1101-2020_09_09_289074 1 100 and and CC 10_1101-2020_09_09_289074 1 101 Medical Medical NNP 10_1101-2020_09_09_289074 1 102 Sciences Sciences NNPS 10_1101-2020_09_09_289074 1 103 , , , 10_1101-2020_09_09_289074 1 104 University University NNP 10_1101-2020_09_09_289074 1 105 “ " `` 10_1101-2020_09_09_289074 1 106 Magna Magna NNPS 10_1101-2020_09_09_289074 1 107 Græcia Græcia NNP 10_1101-2020_09_09_289074 1 108 ” " '' 10_1101-2020_09_09_289074 1 109 of of IN 10_1101-2020_09_09_289074 1 110 Catanzaro Catanzaro NNP 10_1101-2020_09_09_289074 1 111 , , , 10_1101-2020_09_09_289074 1 112 Catanzaro Catanzaro NNP 10_1101-2020_09_09_289074 1 113 , , , 10_1101-2020_09_09_289074 1 114 Italy Italy NNP 10_1101-2020_09_09_289074 1 115 * * NFP 10_1101-2020_09_09_289074 1 116 Corresponding Corresponding NNP 10_1101-2020_09_09_289074 1 117 author author NN 10_1101-2020_09_09_289074 1 118 E e NN 10_1101-2020_09_09_289074 1 119 - - NN 10_1101-2020_09_09_289074 1 120 mail mail NN 10_1101-2020_09_09_289074 1 121 : : : 10_1101-2020_09_09_289074 1 122 federico.giorgi@unibo.it federico.giorgi@unibo.it NNP 10_1101-2020_09_09_289074 1 123 ( ( -LRB- 10_1101-2020_09_09_289074 1 124 FMG FMG NNP 10_1101-2020_09_09_289074 1 125 ) ) -RRB- 10_1101-2020_09_09_289074 1 126 ORCIDs ORCIDs NNP 10_1101-2020_09_09_289074 1 127 Francesco Francesco NNP 10_1101-2020_09_09_289074 1 128 Ortuso Ortuso NNP 10_1101-2020_09_09_289074 1 129 : : : 10_1101-2020_09_09_289074 1 130 0000 0000 CD 10_1101-2020_09_09_289074 1 131 - - HYPH 10_1101-2020_09_09_289074 1 132 0001 0001 CD 10_1101-2020_09_09_289074 1 133 - - HYPH 10_1101-2020_09_09_289074 1 134 6235 6235 CD 10_1101-2020_09_09_289074 1 135 - - HYPH 10_1101-2020_09_09_289074 1 136 8161 8161 CD 10_1101-2020_09_09_289074 1 137 Daniele Daniele NNP 10_1101-2020_09_09_289074 1 138 Mercatelli Mercatelli NNP 10_1101-2020_09_09_289074 1 139 : : : 10_1101-2020_09_09_289074 1 140 0000 0000 CD 10_1101-2020_09_09_289074 1 141 - - HYPH 10_1101-2020_09_09_289074 1 142 0003 0003 CD 10_1101-2020_09_09_289074 1 143 - - HYPH 10_1101-2020_09_09_289074 1 144 3228 3228 CD 10_1101-2020_09_09_289074 1 145 - - HYPH 10_1101-2020_09_09_289074 1 146 0580 0580 CD 10_1101-2020_09_09_289074 1 147 Pietro Pietro NNP 10_1101-2020_09_09_289074 1 148 Hiram Hiram NNP 10_1101-2020_09_09_289074 1 149 Guzzi Guzzi NNP 10_1101-2020_09_09_289074 1 150 : : : 10_1101-2020_09_09_289074 1 151 0000 0000 CD 10_1101-2020_09_09_289074 1 152 - - HYPH 10_1101-2020_09_09_289074 1 153 0001 0001 CD 10_1101-2020_09_09_289074 1 154 - - HYPH 10_1101-2020_09_09_289074 1 155 5542 5542 CD 10_1101-2020_09_09_289074 1 156 - - HYPH 10_1101-2020_09_09_289074 1 157 2997 2997 CD 10_1101-2020_09_09_289074 1 158 Federico Federico NNP 10_1101-2020_09_09_289074 1 159 Manuel Manuel NNP 10_1101-2020_09_09_289074 1 160 Giorgi Giorgi NNP 10_1101-2020_09_09_289074 1 161 : : : 10_1101-2020_09_09_289074 1 162 0000 0000 CD 10_1101-2020_09_09_289074 1 163 - - HYPH 10_1101-2020_09_09_289074 1 164 0002 0002 CD 10_1101-2020_09_09_289074 1 165 - - HYPH 10_1101-2020_09_09_289074 1 166 7325 7325 CD 10_1101-2020_09_09_289074 1 167 - - SYM 10_1101-2020_09_09_289074 1 168 9908 9908 CD 10_1101-2020_09_09_289074 1 169 Classification Classification NNP 10_1101-2020_09_09_289074 1 170 Biophysics Biophysics NNPS 10_1101-2020_09_09_289074 1 171 and and CC 10_1101-2020_09_09_289074 1 172 Computational Computational NNP 10_1101-2020_09_09_289074 1 173 Biology Biology NNP 10_1101-2020_09_09_289074 1 174 Keywords Keywords NNP 10_1101-2020_09_09_289074 1 175 SARS SARS NNP 10_1101-2020_09_09_289074 1 176 - - HYPH 10_1101-2020_09_09_289074 1 177 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 1 178 , , , 10_1101-2020_09_09_289074 1 179 COVID-19 COVID-19 , 10_1101-2020_09_09_289074 1 180 , , , 10_1101-2020_09_09_289074 1 181 mutations mutation NNS 10_1101-2020_09_09_289074 1 182 , , , 10_1101-2020_09_09_289074 1 183 Spike Spike NNP 10_1101-2020_09_09_289074 1 184 , , , 10_1101-2020_09_09_289074 1 185 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 1 186 Author Author NNP 10_1101-2020_09_09_289074 1 187 Contributions Contributions NNPS 10_1101-2020_09_09_289074 1 188 FMG FMG NNP 10_1101-2020_09_09_289074 1 189 , , , 10_1101-2020_09_09_289074 1 190 PHG PHG NNP 10_1101-2020_09_09_289074 1 191 and and CC 10_1101-2020_09_09_289074 1 192 FO FO NNP 10_1101-2020_09_09_289074 1 193 designed design VBD 10_1101-2020_09_09_289074 1 194 the the DT 10_1101-2020_09_09_289074 1 195 study study NN 10_1101-2020_09_09_289074 1 196 . . . 10_1101-2020_09_09_289074 2 1 FO FO NNP 10_1101-2020_09_09_289074 2 2 designed design VBD 10_1101-2020_09_09_289074 2 3 and and CC 10_1101-2020_09_09_289074 2 4 performed perform VBD 10_1101-2020_09_09_289074 2 5 the the DT 10_1101-2020_09_09_289074 2 6 structural structural JJ 10_1101-2020_09_09_289074 2 7 analysis analysis NN 10_1101-2020_09_09_289074 2 8 . . . 10_1101-2020_09_09_289074 3 1 FMG FMG NNP 10_1101-2020_09_09_289074 3 2 designed design VBD 10_1101-2020_09_09_289074 3 3 the the DT 10_1101-2020_09_09_289074 3 4 genetics genetic NNS 10_1101-2020_09_09_289074 3 5 analysis analysis NN 10_1101-2020_09_09_289074 3 6 . . . 10_1101-2020_09_09_289074 4 1 FMG FMG NNP 10_1101-2020_09_09_289074 4 2 and and CC 10_1101-2020_09_09_289074 4 3 DM DM NNP 10_1101-2020_09_09_289074 4 4 performed perform VBD 10_1101-2020_09_09_289074 4 5 the the DT 10_1101-2020_09_09_289074 4 6 genetics genetic NNS 10_1101-2020_09_09_289074 4 7 analysis analysis NN 10_1101-2020_09_09_289074 4 8 . . . 10_1101-2020_09_09_289074 5 1 FMG FMG NNP 10_1101-2020_09_09_289074 5 2 financially financially RB 10_1101-2020_09_09_289074 5 3 supported support VBD 10_1101-2020_09_09_289074 5 4 the the DT 10_1101-2020_09_09_289074 5 5 study study NN 10_1101-2020_09_09_289074 5 6 . . . 10_1101-2020_09_09_289074 6 1 PHG PHG NNP 10_1101-2020_09_09_289074 6 2 drafted draft VBD 10_1101-2020_09_09_289074 6 3 the the DT 10_1101-2020_09_09_289074 6 4 manuscript manuscript NN 10_1101-2020_09_09_289074 6 5 and and CC 10_1101-2020_09_09_289074 6 6 performed perform VBN 10_1101-2020_09_09_289074 6 7 literature literature NN 10_1101-2020_09_09_289074 6 8 search search NN 10_1101-2020_09_09_289074 6 9 . . . 10_1101-2020_09_09_289074 7 1 All all DT 10_1101-2020_09_09_289074 7 2 authors author NNS 10_1101-2020_09_09_289074 7 3 contributed contribute VBD 10_1101-2020_09_09_289074 7 4 to to IN 10_1101-2020_09_09_289074 7 5 the the DT 10_1101-2020_09_09_289074 7 6 writing writing NN 10_1101-2020_09_09_289074 7 7 of of IN 10_1101-2020_09_09_289074 7 8 the the DT 10_1101-2020_09_09_289074 7 9 final final JJ 10_1101-2020_09_09_289074 7 10 version version NN 10_1101-2020_09_09_289074 7 11 of of IN 10_1101-2020_09_09_289074 7 12 the the DT 10_1101-2020_09_09_289074 7 13 manuscript manuscript NN 10_1101-2020_09_09_289074 7 14 . . . 10_1101-2020_09_09_289074 8 1 Abstract abstract JJ 10_1101-2020_09_09_289074 8 2 .CC .CC NFP 10_1101-2020_09_09_289074 8 3 - - : 10_1101-2020_09_09_289074 8 4 BY by IN 10_1101-2020_09_09_289074 8 5 - - HYPH 10_1101-2020_09_09_289074 8 6 NC NC NNP 10_1101-2020_09_09_289074 8 7 - - HYPH 10_1101-2020_09_09_289074 8 8 ND ND NNP 10_1101-2020_09_09_289074 8 9 4.0 4.0 CD 10_1101-2020_09_09_289074 8 10 International International NNP 10_1101-2020_09_09_289074 8 11 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 8 12 under under IN 10_1101-2020_09_09_289074 8 13 a a DT 10_1101-2020_09_09_289074 8 14 ( ( -LRB- 10_1101-2020_09_09_289074 8 15 which which WDT 10_1101-2020_09_09_289074 8 16 was be VBD 10_1101-2020_09_09_289074 8 17 not not RB 10_1101-2020_09_09_289074 8 18 certified certify VBN 10_1101-2020_09_09_289074 8 19 by by IN 10_1101-2020_09_09_289074 8 20 peer peer NN 10_1101-2020_09_09_289074 8 21 review review NN 10_1101-2020_09_09_289074 8 22 ) ) -RRB- 10_1101-2020_09_09_289074 8 23 is be VBZ 10_1101-2020_09_09_289074 8 24 the the DT 10_1101-2020_09_09_289074 8 25 author author NN 10_1101-2020_09_09_289074 8 26 / / SYM 10_1101-2020_09_09_289074 8 27 funder funder NN 10_1101-2020_09_09_289074 8 28 , , , 10_1101-2020_09_09_289074 8 29 who who WP 10_1101-2020_09_09_289074 8 30 has have VBZ 10_1101-2020_09_09_289074 8 31 granted grant VBN 10_1101-2020_09_09_289074 8 32 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 8 33 a a DT 10_1101-2020_09_09_289074 8 34 license license NN 10_1101-2020_09_09_289074 8 35 to to TO 10_1101-2020_09_09_289074 8 36 display display VB 10_1101-2020_09_09_289074 8 37 the the DT 10_1101-2020_09_09_289074 8 38 preprint preprint NN 10_1101-2020_09_09_289074 8 39 in in IN 10_1101-2020_09_09_289074 8 40 perpetuity perpetuity NN 10_1101-2020_09_09_289074 8 41 . . . 10_1101-2020_09_09_289074 9 1 It -PRON- PRP 10_1101-2020_09_09_289074 9 2 is be VBZ 10_1101-2020_09_09_289074 9 3 made make VBN 10_1101-2020_09_09_289074 9 4 The the DT 10_1101-2020_09_09_289074 9 5 copyright copyright NN 10_1101-2020_09_09_289074 9 6 holder holder NN 10_1101-2020_09_09_289074 9 7 for for IN 10_1101-2020_09_09_289074 9 8 this this DT 10_1101-2020_09_09_289074 9 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 9 10 version version NN 10_1101-2020_09_09_289074 9 11 posted post VBD 10_1101-2020_09_09_289074 9 12 January January NNP 10_1101-2020_09_09_289074 9 13 5 5 CD 10_1101-2020_09_09_289074 9 14 , , , 10_1101-2020_09_09_289074 9 15 2021 2021 CD 10_1101-2020_09_09_289074 9 16 . . . 10_1101-2020_09_09_289074 9 17 ; ; : 10_1101-2020_09_09_289074 9 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 9 19 : : : 10_1101-2020_09_09_289074 9 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 9 21 preprint preprint NN 10_1101-2020_09_09_289074 9 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 ADD 10_1101-2020_09_09_289074 9 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NNP 10_1101-2020_09_09_289074 9 24 2 2 CD 10_1101-2020_09_09_289074 9 25 SARS SARS NNP 10_1101-2020_09_09_289074 9 26 - - HYPH 10_1101-2020_09_09_289074 9 27 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 9 28 entry entry NN 10_1101-2020_09_09_289074 9 29 in in IN 10_1101-2020_09_09_289074 9 30 human human JJ 10_1101-2020_09_09_289074 9 31 cells cell NNS 10_1101-2020_09_09_289074 9 32 is be VBZ 10_1101-2020_09_09_289074 9 33 mediated mediate VBN 10_1101-2020_09_09_289074 9 34 by by IN 10_1101-2020_09_09_289074 9 35 the the DT 10_1101-2020_09_09_289074 9 36 interaction interaction NN 10_1101-2020_09_09_289074 9 37 between between IN 10_1101-2020_09_09_289074 9 38 the the DT 10_1101-2020_09_09_289074 9 39 viral viral JJ 10_1101-2020_09_09_289074 9 40 Spike spike JJ 10_1101-2020_09_09_289074 9 41 protein protein NN 10_1101-2020_09_09_289074 9 42 and and CC 10_1101-2020_09_09_289074 9 43 the the DT 10_1101-2020_09_09_289074 9 44 human human JJ 10_1101-2020_09_09_289074 9 45 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 9 46 receptor receptor NN 10_1101-2020_09_09_289074 9 47 . . . 10_1101-2020_09_09_289074 10 1 This this DT 10_1101-2020_09_09_289074 10 2 mechanism mechanism NN 10_1101-2020_09_09_289074 10 3 evolved evolve VBD 10_1101-2020_09_09_289074 10 4 from from IN 10_1101-2020_09_09_289074 10 5 the the DT 10_1101-2020_09_09_289074 10 6 ancestor ancestor NN 10_1101-2020_09_09_289074 10 7 bat bat NN 10_1101-2020_09_09_289074 10 8 coronavirus coronavirus NNP 10_1101-2020_09_09_289074 10 9 and and CC 10_1101-2020_09_09_289074 10 10 is be VBZ 10_1101-2020_09_09_289074 10 11 currently currently RB 10_1101-2020_09_09_289074 10 12 one one CD 10_1101-2020_09_09_289074 10 13 of of IN 10_1101-2020_09_09_289074 10 14 the the DT 10_1101-2020_09_09_289074 10 15 main main JJ 10_1101-2020_09_09_289074 10 16 targets target NNS 10_1101-2020_09_09_289074 10 17 for for IN 10_1101-2020_09_09_289074 10 18 antiviral antiviral JJ 10_1101-2020_09_09_289074 10 19 strategies strategy NNS 10_1101-2020_09_09_289074 10 20 . . . 10_1101-2020_09_09_289074 11 1 However however RB 10_1101-2020_09_09_289074 11 2 , , , 10_1101-2020_09_09_289074 11 3 there there EX 10_1101-2020_09_09_289074 11 4 currently currently RB 10_1101-2020_09_09_289074 11 5 exist exist VBP 10_1101-2020_09_09_289074 11 6 several several JJ 10_1101-2020_09_09_289074 11 7 Spike Spike NNP 10_1101-2020_09_09_289074 11 8 protein protein NN 10_1101-2020_09_09_289074 11 9 variants variant NNS 10_1101-2020_09_09_289074 11 10 in in IN 10_1101-2020_09_09_289074 11 11 the the DT 10_1101-2020_09_09_289074 11 12 SARS SARS NNP 10_1101-2020_09_09_289074 11 13 - - HYPH 10_1101-2020_09_09_289074 11 14 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 11 15 population population NN 10_1101-2020_09_09_289074 11 16 as as IN 10_1101-2020_09_09_289074 11 17 the the DT 10_1101-2020_09_09_289074 11 18 result result NN 10_1101-2020_09_09_289074 11 19 of of IN 10_1101-2020_09_09_289074 11 20 mutations mutation NNS 10_1101-2020_09_09_289074 11 21 , , , 10_1101-2020_09_09_289074 11 22 and and CC 10_1101-2020_09_09_289074 11 23 it -PRON- PRP 10_1101-2020_09_09_289074 11 24 is be VBZ 10_1101-2020_09_09_289074 11 25 unclear unclear JJ 10_1101-2020_09_09_289074 11 26 if if IN 10_1101-2020_09_09_289074 11 27 these these DT 10_1101-2020_09_09_289074 11 28 variants variant NNS 10_1101-2020_09_09_289074 11 29 may may MD 10_1101-2020_09_09_289074 11 30 exert exert VB 10_1101-2020_09_09_289074 11 31 a a DT 10_1101-2020_09_09_289074 11 32 specific specific JJ 10_1101-2020_09_09_289074 11 33 effect effect NN 10_1101-2020_09_09_289074 11 34 on on IN 10_1101-2020_09_09_289074 11 35 the the DT 10_1101-2020_09_09_289074 11 36 affinity affinity NN 10_1101-2020_09_09_289074 11 37 with with IN 10_1101-2020_09_09_289074 11 38 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 11 39 which which WDT 10_1101-2020_09_09_289074 11 40 , , , 10_1101-2020_09_09_289074 11 41 in in IN 10_1101-2020_09_09_289074 11 42 turn turn NN 10_1101-2020_09_09_289074 11 43 , , , 10_1101-2020_09_09_289074 11 44 is be VBZ 10_1101-2020_09_09_289074 11 45 also also RB 10_1101-2020_09_09_289074 11 46 characterized characterize VBN 10_1101-2020_09_09_289074 11 47 by by IN 10_1101-2020_09_09_289074 11 48 multiple multiple JJ 10_1101-2020_09_09_289074 11 49 alleles allele NNS 10_1101-2020_09_09_289074 11 50 in in IN 10_1101-2020_09_09_289074 11 51 the the DT 10_1101-2020_09_09_289074 11 52 human human JJ 10_1101-2020_09_09_289074 11 53 population population NN 10_1101-2020_09_09_289074 11 54 . . . 10_1101-2020_09_09_289074 12 1 In in IN 10_1101-2020_09_09_289074 12 2 the the DT 10_1101-2020_09_09_289074 12 3 current current JJ 10_1101-2020_09_09_289074 12 4 study study NN 10_1101-2020_09_09_289074 12 5 , , , 10_1101-2020_09_09_289074 12 6 the the DT 10_1101-2020_09_09_289074 12 7 GBPM GBPM NNP 10_1101-2020_09_09_289074 12 8 analysis analysis NN 10_1101-2020_09_09_289074 12 9 , , , 10_1101-2020_09_09_289074 12 10 originally originally RB 10_1101-2020_09_09_289074 12 11 developed develop VBN 10_1101-2020_09_09_289074 12 12 for for IN 10_1101-2020_09_09_289074 12 13 highlighting highlight VBG 10_1101-2020_09_09_289074 12 14 host host NN 10_1101-2020_09_09_289074 12 15 - - HYPH 10_1101-2020_09_09_289074 12 16 guest guest JJ 10_1101-2020_09_09_289074 12 17 interaction interaction NN 10_1101-2020_09_09_289074 12 18 features feature NNS 10_1101-2020_09_09_289074 12 19 , , , 10_1101-2020_09_09_289074 12 20 has have VBZ 10_1101-2020_09_09_289074 12 21 been be VBN 10_1101-2020_09_09_289074 12 22 applied apply VBN 10_1101-2020_09_09_289074 12 23 to to TO 10_1101-2020_09_09_289074 12 24 define define VB 10_1101-2020_09_09_289074 12 25 the the DT 10_1101-2020_09_09_289074 12 26 key key JJ 10_1101-2020_09_09_289074 12 27 amino amino NN 10_1101-2020_09_09_289074 12 28 acids acid NNS 10_1101-2020_09_09_289074 12 29 responsible responsible JJ 10_1101-2020_09_09_289074 12 30 for for IN 10_1101-2020_09_09_289074 12 31 the the DT 10_1101-2020_09_09_289074 12 32 Spike Spike NNP 10_1101-2020_09_09_289074 12 33 / / SYM 10_1101-2020_09_09_289074 12 34 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 12 35 molecular molecular JJ 10_1101-2020_09_09_289074 12 36 recognition recognition NN 10_1101-2020_09_09_289074 12 37 , , , 10_1101-2020_09_09_289074 12 38 using use VBG 10_1101-2020_09_09_289074 12 39 four four CD 10_1101-2020_09_09_289074 12 40 different different JJ 10_1101-2020_09_09_289074 12 41 crystallographic crystallographic JJ 10_1101-2020_09_09_289074 12 42 structures structure NNS 10_1101-2020_09_09_289074 12 43 . . . 10_1101-2020_09_09_289074 13 1 Then then RB 10_1101-2020_09_09_289074 13 2 , , , 10_1101-2020_09_09_289074 13 3 we -PRON- PRP 10_1101-2020_09_09_289074 13 4 intersected intersect VBD 10_1101-2020_09_09_289074 13 5 these these DT 10_1101-2020_09_09_289074 13 6 structural structural JJ 10_1101-2020_09_09_289074 13 7 results result NNS 10_1101-2020_09_09_289074 13 8 with with IN 10_1101-2020_09_09_289074 13 9 the the DT 10_1101-2020_09_09_289074 13 10 current current JJ 10_1101-2020_09_09_289074 13 11 mutational mutational JJ 10_1101-2020_09_09_289074 13 12 status status NN 10_1101-2020_09_09_289074 13 13 , , , 10_1101-2020_09_09_289074 13 14 based base VBN 10_1101-2020_09_09_289074 13 15 on on IN 10_1101-2020_09_09_289074 13 16 more more JJR 10_1101-2020_09_09_289074 13 17 than than IN 10_1101-2020_09_09_289074 13 18 295,000 295,000 CD 10_1101-2020_09_09_289074 13 19 sequenced sequence VBN 10_1101-2020_09_09_289074 13 20 cases case NNS 10_1101-2020_09_09_289074 13 21 , , , 10_1101-2020_09_09_289074 13 22 in in IN 10_1101-2020_09_09_289074 13 23 the the DT 10_1101-2020_09_09_289074 13 24 SARS SARS NNP 10_1101-2020_09_09_289074 13 25 - - HYPH 10_1101-2020_09_09_289074 13 26 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 13 27 population population NN 10_1101-2020_09_09_289074 13 28 . . . 10_1101-2020_09_09_289074 14 1 We -PRON- PRP 10_1101-2020_09_09_289074 14 2 identified identify VBD 10_1101-2020_09_09_289074 14 3 several several JJ 10_1101-2020_09_09_289074 14 4 Spike Spike NNP 10_1101-2020_09_09_289074 14 5 mutations mutation NNS 10_1101-2020_09_09_289074 14 6 interacting interact VBG 10_1101-2020_09_09_289074 14 7 with with IN 10_1101-2020_09_09_289074 14 8 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 14 9 and and CC 10_1101-2020_09_09_289074 14 10 mutated mutate VBD 10_1101-2020_09_09_289074 14 11 in in IN 10_1101-2020_09_09_289074 14 12 at at RB 10_1101-2020_09_09_289074 14 13 least least RBS 10_1101-2020_09_09_289074 14 14 20 20 CD 10_1101-2020_09_09_289074 14 15 distinct distinct JJ 10_1101-2020_09_09_289074 14 16 patients patient NNS 10_1101-2020_09_09_289074 14 17 : : : 10_1101-2020_09_09_289074 14 18 S477N S477N NNP 10_1101-2020_09_09_289074 14 19 , , , 10_1101-2020_09_09_289074 14 20 N439 N439 NNP 10_1101-2020_09_09_289074 14 21 K K NNP 10_1101-2020_09_09_289074 14 22 , , , 10_1101-2020_09_09_289074 14 23 N501Y N501Y NNP 10_1101-2020_09_09_289074 14 24 , , , 10_1101-2020_09_09_289074 14 25 Y453F Y453F NNP 10_1101-2020_09_09_289074 14 26 , , , 10_1101-2020_09_09_289074 14 27 E484 E484 NNP 10_1101-2020_09_09_289074 14 28 K K NNP 10_1101-2020_09_09_289074 14 29 , , , 10_1101-2020_09_09_289074 14 30 K417N K417N NNP 10_1101-2020_09_09_289074 14 31 , , , 10_1101-2020_09_09_289074 14 32 S477I S477I NNP 10_1101-2020_09_09_289074 14 33 and and CC 10_1101-2020_09_09_289074 14 34 G476S. G476S. NNS 10_1101-2020_09_09_289074 15 1 Among among IN 10_1101-2020_09_09_289074 15 2 these these DT 10_1101-2020_09_09_289074 15 3 , , , 10_1101-2020_09_09_289074 15 4 mutation mutation NN 10_1101-2020_09_09_289074 15 5 N501Y n501y CD 10_1101-2020_09_09_289074 15 6 in in IN 10_1101-2020_09_09_289074 15 7 particular particular JJ 10_1101-2020_09_09_289074 15 8 is be VBZ 10_1101-2020_09_09_289074 15 9 one one CD 10_1101-2020_09_09_289074 15 10 of of IN 10_1101-2020_09_09_289074 15 11 the the DT 10_1101-2020_09_09_289074 15 12 events event NNS 10_1101-2020_09_09_289074 15 13 characterizing characterize VBG 10_1101-2020_09_09_289074 15 14 SARS SARS NNP 10_1101-2020_09_09_289074 15 15 - - HYPH 10_1101-2020_09_09_289074 15 16 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 15 17 lineage lineage NN 10_1101-2020_09_09_289074 15 18 B.1.1.7 B.1.1.7 NNP 10_1101-2020_09_09_289074 15 19 , , , 10_1101-2020_09_09_289074 15 20 which which WDT 10_1101-2020_09_09_289074 15 21 has have VBZ 10_1101-2020_09_09_289074 15 22 recently recently RB 10_1101-2020_09_09_289074 15 23 risen rise VBN 10_1101-2020_09_09_289074 15 24 in in IN 10_1101-2020_09_09_289074 15 25 frequency frequency NN 10_1101-2020_09_09_289074 15 26 in in IN 10_1101-2020_09_09_289074 15 27 Europe Europe NNP 10_1101-2020_09_09_289074 15 28 . . . 10_1101-2020_09_09_289074 16 1 We -PRON- PRP 10_1101-2020_09_09_289074 16 2 also also RB 10_1101-2020_09_09_289074 16 3 identified identify VBD 10_1101-2020_09_09_289074 16 4 five five CD 10_1101-2020_09_09_289074 16 5 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 16 6 rare rare JJ 10_1101-2020_09_09_289074 16 7 variants variant NNS 10_1101-2020_09_09_289074 16 8 that that WDT 10_1101-2020_09_09_289074 16 9 may may MD 10_1101-2020_09_09_289074 16 10 affect affect VB 10_1101-2020_09_09_289074 16 11 interaction interaction NN 10_1101-2020_09_09_289074 16 12 with with IN 10_1101-2020_09_09_289074 16 13 Spike Spike NNP 10_1101-2020_09_09_289074 16 14 and and CC 10_1101-2020_09_09_289074 16 15 susceptibility susceptibility NN 10_1101-2020_09_09_289074 16 16 to to TO 10_1101-2020_09_09_289074 16 17 infection infection NN 10_1101-2020_09_09_289074 16 18 : : : 10_1101-2020_09_09_289074 16 19 S19P s19p NN 10_1101-2020_09_09_289074 16 20 , , , 10_1101-2020_09_09_289074 16 21 E37 E37 NNP 10_1101-2020_09_09_289074 16 22 K K NNP 10_1101-2020_09_09_289074 16 23 , , , 10_1101-2020_09_09_289074 16 24 M82I M82I NNP 10_1101-2020_09_09_289074 16 25 , , , 10_1101-2020_09_09_289074 16 26 E329 E329 NNP 10_1101-2020_09_09_289074 16 27 G g NN 10_1101-2020_09_09_289074 16 28 and and CC 10_1101-2020_09_09_289074 16 29 G352V. g352v. NN 10_1101-2020_09_09_289074 17 1 Significance significance NN 10_1101-2020_09_09_289074 17 2 Statement Statement NNP 10_1101-2020_09_09_289074 17 3 We -PRON- PRP 10_1101-2020_09_09_289074 17 4 developed develop VBD 10_1101-2020_09_09_289074 17 5 a a DT 10_1101-2020_09_09_289074 17 6 method method NN 10_1101-2020_09_09_289074 17 7 to to TO 10_1101-2020_09_09_289074 17 8 identify identify VB 10_1101-2020_09_09_289074 17 9 key key JJ 10_1101-2020_09_09_289074 17 10 amino amino JJ 10_1101-2020_09_09_289074 17 11 acids acid NNS 10_1101-2020_09_09_289074 17 12 responsible responsible JJ 10_1101-2020_09_09_289074 17 13 for for IN 10_1101-2020_09_09_289074 17 14 the the DT 10_1101-2020_09_09_289074 17 15 initial initial JJ 10_1101-2020_09_09_289074 17 16 interaction interaction NN 10_1101-2020_09_09_289074 17 17 between between IN 10_1101-2020_09_09_289074 17 18 SARS SARS NNP 10_1101-2020_09_09_289074 17 19 - - HYPH 10_1101-2020_09_09_289074 17 20 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 17 21 ( ( -LRB- 10_1101-2020_09_09_289074 17 22 the the DT 10_1101-2020_09_09_289074 17 23 COVID-19 COVID-19 NNP 10_1101-2020_09_09_289074 17 24 virus virus NN 10_1101-2020_09_09_289074 17 25 ) ) -RRB- 10_1101-2020_09_09_289074 17 26 and and CC 10_1101-2020_09_09_289074 17 27 human human JJ 10_1101-2020_09_09_289074 17 28 cells cell NNS 10_1101-2020_09_09_289074 17 29 , , , 10_1101-2020_09_09_289074 17 30 through through IN 10_1101-2020_09_09_289074 17 31 the the DT 10_1101-2020_09_09_289074 17 32 analysis analysis NN 10_1101-2020_09_09_289074 17 33 of of IN 10_1101-2020_09_09_289074 17 34 Spike Spike NNP 10_1101-2020_09_09_289074 17 35 / / SYM 10_1101-2020_09_09_289074 17 36 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 17 37 complexes complex NNS 10_1101-2020_09_09_289074 17 38 . . . 10_1101-2020_09_09_289074 18 1 We -PRON- PRP 10_1101-2020_09_09_289074 18 2 further further RB 10_1101-2020_09_09_289074 18 3 identified identify VBD 10_1101-2020_09_09_289074 18 4 which which WDT 10_1101-2020_09_09_289074 18 5 of of IN 10_1101-2020_09_09_289074 18 6 these these DT 10_1101-2020_09_09_289074 18 7 amino amino JJ 10_1101-2020_09_09_289074 18 8 acids acid NNS 10_1101-2020_09_09_289074 18 9 show show VBP 10_1101-2020_09_09_289074 18 10 variants variant NNS 10_1101-2020_09_09_289074 18 11 in in IN 10_1101-2020_09_09_289074 18 12 the the DT 10_1101-2020_09_09_289074 18 13 viral viral JJ 10_1101-2020_09_09_289074 18 14 and and CC 10_1101-2020_09_09_289074 18 15 human human JJ 10_1101-2020_09_09_289074 18 16 populations population NNS 10_1101-2020_09_09_289074 18 17 . . . 10_1101-2020_09_09_289074 19 1 Our -PRON- PRP$ 10_1101-2020_09_09_289074 19 2 results result NNS 10_1101-2020_09_09_289074 19 3 will will MD 10_1101-2020_09_09_289074 19 4 facilitate facilitate VB 10_1101-2020_09_09_289074 19 5 scientists scientist NNS 10_1101-2020_09_09_289074 19 6 and and CC 10_1101-2020_09_09_289074 19 7 clinicians clinician NNS 10_1101-2020_09_09_289074 19 8 alike alike RB 10_1101-2020_09_09_289074 19 9 in in IN 10_1101-2020_09_09_289074 19 10 identifying identify VBG 10_1101-2020_09_09_289074 19 11 the the DT 10_1101-2020_09_09_289074 19 12 possible possible JJ 10_1101-2020_09_09_289074 19 13 role role NN 10_1101-2020_09_09_289074 19 14 of of IN 10_1101-2020_09_09_289074 19 15 present present JJ 10_1101-2020_09_09_289074 19 16 and and CC 10_1101-2020_09_09_289074 19 17 future future JJ 10_1101-2020_09_09_289074 19 18 Spike Spike NNP 10_1101-2020_09_09_289074 19 19 and and CC 10_1101-2020_09_09_289074 19 20 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 19 21 sequence sequence NN 10_1101-2020_09_09_289074 19 22 variants variant NNS 10_1101-2020_09_09_289074 19 23 in in IN 10_1101-2020_09_09_289074 19 24 cell cell NN 10_1101-2020_09_09_289074 19 25 entry entry NN 10_1101-2020_09_09_289074 19 26 and and CC 10_1101-2020_09_09_289074 19 27 general general JJ 10_1101-2020_09_09_289074 19 28 susceptibility susceptibility NN 10_1101-2020_09_09_289074 19 29 to to IN 10_1101-2020_09_09_289074 19 30 infection infection NN 10_1101-2020_09_09_289074 19 31 . . . 10_1101-2020_09_09_289074 20 1 Abbreviations abbreviation NNS 10_1101-2020_09_09_289074 20 2 AA AA NNP 10_1101-2020_09_09_289074 20 3 : : : 10_1101-2020_09_09_289074 20 4 amino amino NN 10_1101-2020_09_09_289074 20 5 acid acid NN 10_1101-2020_09_09_289074 20 6 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 20 7 : : : 10_1101-2020_09_09_289074 20 8 Angiotensin Angiotensin NNP 10_1101-2020_09_09_289074 20 9 - - HYPH 10_1101-2020_09_09_289074 20 10 Converting Converting NNP 10_1101-2020_09_09_289074 20 11 Enzyme Enzyme NNPS 10_1101-2020_09_09_289074 20 12 2 2 CD 10_1101-2020_09_09_289074 20 13 COVID-19 COVID-19 , 10_1101-2020_09_09_289074 20 14 : : : 10_1101-2020_09_09_289074 20 15 Coronavirus Coronavirus NNP 10_1101-2020_09_09_289074 20 16 Disease Disease NNP 10_1101-2020_09_09_289074 20 17 2019 2019 CD 10_1101-2020_09_09_289074 20 18 GBPM GBPM NNP 10_1101-2020_09_09_289074 20 19 : : : 10_1101-2020_09_09_289074 20 20 Grid Grid NNP 10_1101-2020_09_09_289074 20 21 Based Based NNP 10_1101-2020_09_09_289074 20 22 Pharmacophore Pharmacophore NNP 10_1101-2020_09_09_289074 20 23 Model Model NNP 10_1101-2020_09_09_289074 20 24 IEP IEP NNP 10_1101-2020_09_09_289074 20 25 : : : 10_1101-2020_09_09_289074 20 26 Interaction Interaction NNP 10_1101-2020_09_09_289074 20 27 Energy Energy NNP 10_1101-2020_09_09_289074 20 28 point point NN 10_1101-2020_09_09_289074 20 29 MIFs mif NNS 10_1101-2020_09_09_289074 20 30 : : : 10_1101-2020_09_09_289074 20 31 Molecular Molecular NNP 10_1101-2020_09_09_289074 20 32 Interaction Interaction NNP 10_1101-2020_09_09_289074 20 33 Fields Fields NNPS 10_1101-2020_09_09_289074 20 34 ORF ORF NNP 10_1101-2020_09_09_289074 20 35 : : : 10_1101-2020_09_09_289074 20 36 Open open JJ 10_1101-2020_09_09_289074 20 37 Reading Reading NNP 10_1101-2020_09_09_289074 20 38 Frame Frame NNP 10_1101-2020_09_09_289074 20 39 PDB pdb NN 10_1101-2020_09_09_289074 20 40 : : : 10_1101-2020_09_09_289074 20 41 Protein Protein NNP 10_1101-2020_09_09_289074 20 42 Data Data NNPS 10_1101-2020_09_09_289074 20 43 Bank Bank NNP 10_1101-2020_09_09_289074 20 44 RBD RBD NNP 10_1101-2020_09_09_289074 20 45 : : : 10_1101-2020_09_09_289074 20 46 Spike Spike NNP 10_1101-2020_09_09_289074 20 47 Receptor Receptor NNP 10_1101-2020_09_09_289074 20 48 Binding Binding NNP 10_1101-2020_09_09_289074 20 49 Domain Domain NNP 10_1101-2020_09_09_289074 20 50 with with IN 10_1101-2020_09_09_289074 20 51 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 20 52 RMSd RMSd NNS 10_1101-2020_09_09_289074 20 53 : : : 10_1101-2020_09_09_289074 20 54 Root Root NNP 10_1101-2020_09_09_289074 20 55 Mean Mean NNP 10_1101-2020_09_09_289074 20 56 Square Square NNP 10_1101-2020_09_09_289074 20 57 deviation deviation NN 10_1101-2020_09_09_289074 20 58 SARS SARS NNP 10_1101-2020_09_09_289074 20 59 - - HYPH 10_1101-2020_09_09_289074 20 60 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 20 61 : : : 10_1101-2020_09_09_289074 20 62 Severe Severe NNP 10_1101-2020_09_09_289074 20 63 Acute Acute NNP 10_1101-2020_09_09_289074 20 64 Respiratory respiratory JJ 10_1101-2020_09_09_289074 20 65 Syndrome syndrome NN 10_1101-2020_09_09_289074 20 66 Coronavirus coronavirus NN 10_1101-2020_09_09_289074 20 67 2 2 CD 10_1101-2020_09_09_289074 20 68 Main Main NNP 10_1101-2020_09_09_289074 20 69 Text Text NNP 10_1101-2020_09_09_289074 20 70 Introduction introduction NN 10_1101-2020_09_09_289074 20 71 The the DT 10_1101-2020_09_09_289074 20 72 Severe Severe NNP 10_1101-2020_09_09_289074 20 73 Acute Acute NNP 10_1101-2020_09_09_289074 20 74 Respiratory respiratory JJ 10_1101-2020_09_09_289074 20 75 Syndrome Syndrome NNP 10_1101-2020_09_09_289074 20 76 Coronavirus Coronavirus NNP 10_1101-2020_09_09_289074 20 77 2 2 CD 10_1101-2020_09_09_289074 20 78 ( ( -LRB- 10_1101-2020_09_09_289074 20 79 SARS SARS NNP 10_1101-2020_09_09_289074 20 80 - - HYPH 10_1101-2020_09_09_289074 20 81 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 20 82 ) ) -RRB- 10_1101-2020_09_09_289074 20 83 has have VBZ 10_1101-2020_09_09_289074 20 84 emerged emerge VBN 10_1101-2020_09_09_289074 20 85 in in IN 10_1101-2020_09_09_289074 20 86 late late JJ 10_1101-2020_09_09_289074 20 87 2019 2019 CD 10_1101-2020_09_09_289074 20 88 ( ( -LRB- 10_1101-2020_09_09_289074 20 89 1 1 CD 10_1101-2020_09_09_289074 20 90 ) ) -RRB- 10_1101-2020_09_09_289074 20 91 as as IN 10_1101-2020_09_09_289074 20 92 the the DT 10_1101-2020_09_09_289074 20 93 etiological etiological JJ 10_1101-2020_09_09_289074 20 94 cause cause NN 10_1101-2020_09_09_289074 20 95 of of IN 10_1101-2020_09_09_289074 20 96 a a DT 10_1101-2020_09_09_289074 20 97 pandemic pandemic NN 10_1101-2020_09_09_289074 20 98 of of IN 10_1101-2020_09_09_289074 20 99 severe severe JJ 10_1101-2020_09_09_289074 20 100 proportions proportion NNS 10_1101-2020_09_09_289074 20 101 dubbed dub VBD 10_1101-2020_09_09_289074 20 102 Coronavirus Coronavirus NNP 10_1101-2020_09_09_289074 20 103 Disease Disease NNP 10_1101-2020_09_09_289074 20 104 19 19 CD 10_1101-2020_09_09_289074 20 105 ( ( -LRB- 10_1101-2020_09_09_289074 20 106 COVID- COVID- NNP 10_1101-2020_09_09_289074 20 107 19 19 CD 10_1101-2020_09_09_289074 20 108 ) ) -RRB- 10_1101-2020_09_09_289074 20 109 . . . 10_1101-2020_09_09_289074 21 1 The the DT 10_1101-2020_09_09_289074 21 2 disease disease NN 10_1101-2020_09_09_289074 21 3 has have VBZ 10_1101-2020_09_09_289074 21 4 reached reach VBN 10_1101-2020_09_09_289074 21 5 virtually virtually RB 10_1101-2020_09_09_289074 21 6 every every DT 10_1101-2020_09_09_289074 21 7 country country NN 10_1101-2020_09_09_289074 21 8 in in IN 10_1101-2020_09_09_289074 21 9 the the DT 10_1101-2020_09_09_289074 21 10 globe globe NN 10_1101-2020_09_09_289074 21 11 ( ( -LRB- 10_1101-2020_09_09_289074 21 12 2 2 CD 10_1101-2020_09_09_289074 21 13 ) ) -RRB- 10_1101-2020_09_09_289074 21 14 , , , 10_1101-2020_09_09_289074 21 15 with with IN 10_1101-2020_09_09_289074 21 16 more more JJR 10_1101-2020_09_09_289074 21 17 than than IN 10_1101-2020_09_09_289074 21 18 40,000,000 40,000,000 CD 10_1101-2020_09_09_289074 21 19 .CC .CC : 10_1101-2020_09_09_289074 21 20 - - : 10_1101-2020_09_09_289074 21 21 BY by IN 10_1101-2020_09_09_289074 21 22 - - HYPH 10_1101-2020_09_09_289074 21 23 NC NC NNP 10_1101-2020_09_09_289074 21 24 - - HYPH 10_1101-2020_09_09_289074 21 25 ND ND NNP 10_1101-2020_09_09_289074 21 26 4.0 4.0 CD 10_1101-2020_09_09_289074 21 27 International International NNP 10_1101-2020_09_09_289074 21 28 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 21 29 under under IN 10_1101-2020_09_09_289074 21 30 a a DT 10_1101-2020_09_09_289074 21 31 ( ( -LRB- 10_1101-2020_09_09_289074 21 32 which which WDT 10_1101-2020_09_09_289074 21 33 was be VBD 10_1101-2020_09_09_289074 21 34 not not RB 10_1101-2020_09_09_289074 21 35 certified certify VBN 10_1101-2020_09_09_289074 21 36 by by IN 10_1101-2020_09_09_289074 21 37 peer peer NN 10_1101-2020_09_09_289074 21 38 review review NN 10_1101-2020_09_09_289074 21 39 ) ) -RRB- 10_1101-2020_09_09_289074 21 40 is be VBZ 10_1101-2020_09_09_289074 21 41 the the DT 10_1101-2020_09_09_289074 21 42 author author NN 10_1101-2020_09_09_289074 21 43 / / SYM 10_1101-2020_09_09_289074 21 44 funder funder NN 10_1101-2020_09_09_289074 21 45 , , , 10_1101-2020_09_09_289074 21 46 who who WP 10_1101-2020_09_09_289074 21 47 has have VBZ 10_1101-2020_09_09_289074 21 48 granted grant VBN 10_1101-2020_09_09_289074 21 49 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 21 50 a a DT 10_1101-2020_09_09_289074 21 51 license license NN 10_1101-2020_09_09_289074 21 52 to to TO 10_1101-2020_09_09_289074 21 53 display display VB 10_1101-2020_09_09_289074 21 54 the the DT 10_1101-2020_09_09_289074 21 55 preprint preprint NN 10_1101-2020_09_09_289074 21 56 in in IN 10_1101-2020_09_09_289074 21 57 perpetuity perpetuity NN 10_1101-2020_09_09_289074 21 58 . . . 10_1101-2020_09_09_289074 22 1 It -PRON- PRP 10_1101-2020_09_09_289074 22 2 is be VBZ 10_1101-2020_09_09_289074 22 3 made make VBN 10_1101-2020_09_09_289074 22 4 The the DT 10_1101-2020_09_09_289074 22 5 copyright copyright NN 10_1101-2020_09_09_289074 22 6 holder holder NN 10_1101-2020_09_09_289074 22 7 for for IN 10_1101-2020_09_09_289074 22 8 this this DT 10_1101-2020_09_09_289074 22 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 22 10 version version NN 10_1101-2020_09_09_289074 22 11 posted post VBD 10_1101-2020_09_09_289074 22 12 January January NNP 10_1101-2020_09_09_289074 22 13 5 5 CD 10_1101-2020_09_09_289074 22 14 , , , 10_1101-2020_09_09_289074 22 15 2021 2021 CD 10_1101-2020_09_09_289074 22 16 . . . 10_1101-2020_09_09_289074 22 17 ; ; : 10_1101-2020_09_09_289074 22 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 22 19 : : : 10_1101-2020_09_09_289074 22 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 22 21 preprint preprint NN 10_1101-2020_09_09_289074 22 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 ADD 10_1101-2020_09_09_289074 22 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NNP 10_1101-2020_09_09_289074 22 24 3 3 CD 10_1101-2020_09_09_289074 22 25 confirmed confirm VBD 10_1101-2020_09_09_289074 22 26 cases case NNS 10_1101-2020_09_09_289074 22 27 and and CC 10_1101-2020_09_09_289074 22 28 more more JJR 10_1101-2020_09_09_289074 22 29 than than IN 10_1101-2020_09_09_289074 22 30 1,100,000 1,100,000 CD 10_1101-2020_09_09_289074 22 31 deaths death NNS 10_1101-2020_09_09_289074 22 32 ( ( -LRB- 10_1101-2020_09_09_289074 22 33 source source NN 10_1101-2020_09_09_289074 22 34 : : : 10_1101-2020_09_09_289074 22 35 World World NNP 10_1101-2020_09_09_289074 22 36 Health Health NNP 10_1101-2020_09_09_289074 22 37 Organization Organization NNP 10_1101-2020_09_09_289074 22 38 ) ) -RRB- 10_1101-2020_09_09_289074 22 39 . . . 10_1101-2020_09_09_289074 23 1 SARS SARS NNP 10_1101-2020_09_09_289074 23 2 - - HYPH 10_1101-2020_09_09_289074 23 3 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 23 4 is be VBZ 10_1101-2020_09_09_289074 23 5 characterized characterize VBN 10_1101-2020_09_09_289074 23 6 by by IN 10_1101-2020_09_09_289074 23 7 a a DT 10_1101-2020_09_09_289074 23 8 29,903-long 29,903-long CD 10_1101-2020_09_09_289074 23 9 single single JJ 10_1101-2020_09_09_289074 23 10 stranded strand VBN 10_1101-2020_09_09_289074 23 11 RNA RNA NNP 10_1101-2020_09_09_289074 23 12 genome genome NN 10_1101-2020_09_09_289074 23 13 , , , 10_1101-2020_09_09_289074 23 14 densely densely RB 10_1101-2020_09_09_289074 23 15 packed pack VBN 10_1101-2020_09_09_289074 23 16 in in IN 10_1101-2020_09_09_289074 23 17 11 11 CD 10_1101-2020_09_09_289074 23 18 Open open JJ 10_1101-2020_09_09_289074 23 19 Reading reading NN 10_1101-2020_09_09_289074 23 20 Frames frame NNS 10_1101-2020_09_09_289074 23 21 ( ( -LRB- 10_1101-2020_09_09_289074 23 22 ORFs ORFs NNPS 10_1101-2020_09_09_289074 23 23 ) ) -RRB- 10_1101-2020_09_09_289074 23 24 ; ; : 10_1101-2020_09_09_289074 23 25 the the DT 10_1101-2020_09_09_289074 23 26 ORF1 ORF1 NNP 10_1101-2020_09_09_289074 23 27 encodes encode VBZ 10_1101-2020_09_09_289074 23 28 for for IN 10_1101-2020_09_09_289074 23 29 a a DT 10_1101-2020_09_09_289074 23 30 polyprotein polyprotein NN 10_1101-2020_09_09_289074 23 31 which which WDT 10_1101-2020_09_09_289074 23 32 is be VBZ 10_1101-2020_09_09_289074 23 33 furtherly furtherly RB 10_1101-2020_09_09_289074 23 34 split split VBN 10_1101-2020_09_09_289074 23 35 in in IN 10_1101-2020_09_09_289074 23 36 16 16 CD 10_1101-2020_09_09_289074 23 37 proteins protein NNS 10_1101-2020_09_09_289074 23 38 , , , 10_1101-2020_09_09_289074 23 39 for for IN 10_1101-2020_09_09_289074 23 40 a a DT 10_1101-2020_09_09_289074 23 41 total total NN 10_1101-2020_09_09_289074 23 42 of of IN 10_1101-2020_09_09_289074 23 43 26 26 CD 10_1101-2020_09_09_289074 23 44 proteins protein NNS 10_1101-2020_09_09_289074 23 45 ( ( -LRB- 10_1101-2020_09_09_289074 23 46 3 3 CD 10_1101-2020_09_09_289074 23 47 ) ) -RRB- 10_1101-2020_09_09_289074 23 48 . . . 10_1101-2020_09_09_289074 24 1 The the DT 10_1101-2020_09_09_289074 24 2 second second JJ 10_1101-2020_09_09_289074 24 3 ORF ORF NNP 10_1101-2020_09_09_289074 24 4 encodes encode NNS 10_1101-2020_09_09_289074 24 5 for for IN 10_1101-2020_09_09_289074 24 6 the the DT 10_1101-2020_09_09_289074 24 7 Spike Spike NNP 10_1101-2020_09_09_289074 24 8 ( ( -LRB- 10_1101-2020_09_09_289074 24 9 S S NNP 10_1101-2020_09_09_289074 24 10 ) ) -RRB- 10_1101-2020_09_09_289074 24 11 protein protein NN 10_1101-2020_09_09_289074 24 12 , , , 10_1101-2020_09_09_289074 24 13 which which WDT 10_1101-2020_09_09_289074 24 14 is be VBZ 10_1101-2020_09_09_289074 24 15 the the DT 10_1101-2020_09_09_289074 24 16 key key JJ 10_1101-2020_09_09_289074 24 17 protagonist protagonist NN 10_1101-2020_09_09_289074 24 18 in in IN 10_1101-2020_09_09_289074 24 19 the the DT 10_1101-2020_09_09_289074 24 20 viral viral JJ 10_1101-2020_09_09_289074 24 21 entry entry NN 10_1101-2020_09_09_289074 24 22 into into IN 10_1101-2020_09_09_289074 24 23 host host NN 10_1101-2020_09_09_289074 24 24 cells cell NNS 10_1101-2020_09_09_289074 24 25 , , , 10_1101-2020_09_09_289074 24 26 through through IN 10_1101-2020_09_09_289074 24 27 its -PRON- PRP$ 10_1101-2020_09_09_289074 24 28 interaction interaction NN 10_1101-2020_09_09_289074 24 29 with with IN 10_1101-2020_09_09_289074 24 30 human human JJ 10_1101-2020_09_09_289074 24 31 epithelial epithelial JJ 10_1101-2020_09_09_289074 24 32 cell cell NN 10_1101-2020_09_09_289074 24 33 receptors receptor NNS 10_1101-2020_09_09_289074 24 34 Angiotensin Angiotensin NNP 10_1101-2020_09_09_289074 24 35 Converting Converting NNP 10_1101-2020_09_09_289074 24 36 Enzyme Enzyme NNPS 10_1101-2020_09_09_289074 24 37 2 2 CD 10_1101-2020_09_09_289074 24 38 ( ( -LRB- 10_1101-2020_09_09_289074 24 39 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 24 40 ) ) -RRB- 10_1101-2020_09_09_289074 24 41 ( ( -LRB- 10_1101-2020_09_09_289074 24 42 4 4 CD 10_1101-2020_09_09_289074 24 43 ) ) -RRB- 10_1101-2020_09_09_289074 24 44 , , , 10_1101-2020_09_09_289074 24 45 Transmembrane Transmembrane NNP 10_1101-2020_09_09_289074 24 46 Serine Serine NNP 10_1101-2020_09_09_289074 24 47 Protease Protease NNP 10_1101-2020_09_09_289074 24 48 2 2 CD 10_1101-2020_09_09_289074 24 49 ( ( -LRB- 10_1101-2020_09_09_289074 24 50 TMPRSS2 TMPRSS2 NNP 10_1101-2020_09_09_289074 24 51 ) ) -RRB- 10_1101-2020_09_09_289074 24 52 ( ( -LRB- 10_1101-2020_09_09_289074 24 53 5 5 CD 10_1101-2020_09_09_289074 24 54 ) ) -RRB- 10_1101-2020_09_09_289074 24 55 , , , 10_1101-2020_09_09_289074 24 56 Furin Furin NNP 10_1101-2020_09_09_289074 24 57 ( ( -LRB- 10_1101-2020_09_09_289074 24 58 6 6 CD 10_1101-2020_09_09_289074 24 59 ) ) -RRB- 10_1101-2020_09_09_289074 24 60 and and CC 10_1101-2020_09_09_289074 24 61 CD147 CD147 NNP 10_1101-2020_09_09_289074 24 62 ( ( -LRB- 10_1101-2020_09_09_289074 24 63 7 7 CD 10_1101-2020_09_09_289074 24 64 ) ) -RRB- 10_1101-2020_09_09_289074 24 65 . . . 10_1101-2020_09_09_289074 25 1 Investigators investigator NNS 10_1101-2020_09_09_289074 25 2 have have VBP 10_1101-2020_09_09_289074 25 3 focused focus VBN 10_1101-2020_09_09_289074 25 4 their -PRON- PRP$ 10_1101-2020_09_09_289074 25 5 attention attention NN 10_1101-2020_09_09_289074 25 6 on on IN 10_1101-2020_09_09_289074 25 7 the the DT 10_1101-2020_09_09_289074 25 8 Spike Spike NNP 10_1101-2020_09_09_289074 25 9 / / SYM 10_1101-2020_09_09_289074 25 10 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 25 11 interaction interaction NN 10_1101-2020_09_09_289074 25 12 , , , 10_1101-2020_09_09_289074 25 13 trying try VBG 10_1101-2020_09_09_289074 25 14 to to TO 10_1101-2020_09_09_289074 25 15 disrupt disrupt VB 10_1101-2020_09_09_289074 25 16 it -PRON- PRP 10_1101-2020_09_09_289074 25 17 as as IN 10_1101-2020_09_09_289074 25 18 a a DT 10_1101-2020_09_09_289074 25 19 potential potential JJ 10_1101-2020_09_09_289074 25 20 anti anti JJ 10_1101-2020_09_09_289074 25 21 - - JJ 10_1101-2020_09_09_289074 25 22 COVID-19 covid-19 JJ 10_1101-2020_09_09_289074 25 23 therapy therapy NN 10_1101-2020_09_09_289074 25 24 , , , 10_1101-2020_09_09_289074 25 25 using use VBG 10_1101-2020_09_09_289074 25 26 small small JJ 10_1101-2020_09_09_289074 25 27 drugs drug NNS 10_1101-2020_09_09_289074 25 28 ( ( -LRB- 10_1101-2020_09_09_289074 25 29 8) 8) CD 10_1101-2020_09_09_289074 25 30 or or CC 10_1101-2020_09_09_289074 25 31 Spike Spike NNP 10_1101-2020_09_09_289074 25 32 fragments fragment NNS 10_1101-2020_09_09_289074 25 33 ( ( -LRB- 10_1101-2020_09_09_289074 25 34 9 9 CD 10_1101-2020_09_09_289074 25 35 ) ) -RRB- 10_1101-2020_09_09_289074 25 36 . . . 10_1101-2020_09_09_289074 26 1 Using use VBG 10_1101-2020_09_09_289074 26 2 X x NN 10_1101-2020_09_09_289074 26 3 - - NN 10_1101-2020_09_09_289074 26 4 ray ray NN 10_1101-2020_09_09_289074 26 5 crystallography crystallography NN 10_1101-2020_09_09_289074 26 6 , , , 10_1101-2020_09_09_289074 26 7 some some DT 10_1101-2020_09_09_289074 26 8 models model NNS 10_1101-2020_09_09_289074 26 9 of of IN 10_1101-2020_09_09_289074 26 10 the the DT 10_1101-2020_09_09_289074 26 11 Spike Spike NNP 10_1101-2020_09_09_289074 26 12 / / SYM 10_1101-2020_09_09_289074 26 13 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 26 14 have have VBP 10_1101-2020_09_09_289074 26 15 been be VBN 10_1101-2020_09_09_289074 26 16 generated generate VBN 10_1101-2020_09_09_289074 26 17 ( ( -LRB- 10_1101-2020_09_09_289074 26 18 10–12 10–12 CD 10_1101-2020_09_09_289074 26 19 ) ) -RRB- 10_1101-2020_09_09_289074 26 20 , , , 10_1101-2020_09_09_289074 26 21 providing provide VBG 10_1101-2020_09_09_289074 26 22 a a DT 10_1101-2020_09_09_289074 26 23 structural structural JJ 10_1101-2020_09_09_289074 26 24 instrument instrument NN 10_1101-2020_09_09_289074 26 25 for for IN 10_1101-2020_09_09_289074 26 26 the the DT 10_1101-2020_09_09_289074 26 27 analysis analysis NN 10_1101-2020_09_09_289074 26 28 of of IN 10_1101-2020_09_09_289074 26 29 this this DT 10_1101-2020_09_09_289074 26 30 key key JJ 10_1101-2020_09_09_289074 26 31 interaction interaction NN 10_1101-2020_09_09_289074 26 32 . . . 10_1101-2020_09_09_289074 27 1 These these DT 10_1101-2020_09_09_289074 27 2 models model NNS 10_1101-2020_09_09_289074 27 3 determined determine VBD 10_1101-2020_09_09_289074 27 4 that that IN 10_1101-2020_09_09_289074 27 5 the the DT 10_1101-2020_09_09_289074 27 6 Receptor Receptor NNP 10_1101-2020_09_09_289074 27 7 Binding Binding NNP 10_1101-2020_09_09_289074 27 8 Domain Domain NNP 10_1101-2020_09_09_289074 27 9 ( ( -LRB- 10_1101-2020_09_09_289074 27 10 RBD RBD NNP 10_1101-2020_09_09_289074 27 11 ) ) -RRB- 10_1101-2020_09_09_289074 27 12 of of IN 10_1101-2020_09_09_289074 27 13 Spike Spike NNP 10_1101-2020_09_09_289074 27 14 , , , 10_1101-2020_09_09_289074 27 15 directly directly RB 10_1101-2020_09_09_289074 27 16 interacting interact VBG 10_1101-2020_09_09_289074 27 17 with with IN 10_1101-2020_09_09_289074 27 18 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 27 19 , , , 10_1101-2020_09_09_289074 27 20 is be VBZ 10_1101-2020_09_09_289074 27 21 a a DT 10_1101-2020_09_09_289074 27 22 compact compact JJ 10_1101-2020_09_09_289074 27 23 structure structure NN 10_1101-2020_09_09_289074 27 24 of of IN 10_1101-2020_09_09_289074 27 25 ~200 ~200 JJ 10_1101-2020_09_09_289074 27 26 amino amino JJ 10_1101-2020_09_09_289074 27 27 acids acid NNS 10_1101-2020_09_09_289074 27 28 ( ( -LRB- 10_1101-2020_09_09_289074 27 29 AAs aas NN 10_1101-2020_09_09_289074 27 30 ) ) -RRB- 10_1101-2020_09_09_289074 27 31 over over IN 10_1101-2020_09_09_289074 27 32 a a DT 10_1101-2020_09_09_289074 27 33 total total NN 10_1101-2020_09_09_289074 27 34 of of IN 10_1101-2020_09_09_289074 27 35 1273 1273 CD 10_1101-2020_09_09_289074 27 36 AAs aa NNS 10_1101-2020_09_09_289074 27 37 of of IN 10_1101-2020_09_09_289074 27 38 the the DT 10_1101-2020_09_09_289074 27 39 full full JJ 10_1101-2020_09_09_289074 27 40 - - HYPH 10_1101-2020_09_09_289074 27 41 length length NN 10_1101-2020_09_09_289074 27 42 Spike Spike NNP 10_1101-2020_09_09_289074 27 43 . . . 10_1101-2020_09_09_289074 28 1 The the DT 10_1101-2020_09_09_289074 28 2 SARS SARS NNP 10_1101-2020_09_09_289074 28 3 - - HYPH 10_1101-2020_09_09_289074 28 4 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 28 5 Spike Spike NNP 10_1101-2020_09_09_289074 28 6 protein protein NN 10_1101-2020_09_09_289074 28 7 adapted adapt VBD 10_1101-2020_09_09_289074 28 8 from from IN 10_1101-2020_09_09_289074 28 9 subsequent subsequent JJ 10_1101-2020_09_09_289074 28 10 mutations mutation NNS 10_1101-2020_09_09_289074 28 11 from from IN 10_1101-2020_09_09_289074 28 12 a a DT 10_1101-2020_09_09_289074 28 13 wild wild JJ 10_1101-2020_09_09_289074 28 14 bat bat NN 10_1101-2020_09_09_289074 28 15 beta beta NN 10_1101-2020_09_09_289074 28 16 - - HYPH 10_1101-2020_09_09_289074 28 17 coronavirus coronavirus NN 10_1101-2020_09_09_289074 28 18 ( ( -LRB- 10_1101-2020_09_09_289074 28 19 13 13 CD 10_1101-2020_09_09_289074 28 20 ) ) -RRB- 10_1101-2020_09_09_289074 28 21 , , , 10_1101-2020_09_09_289074 28 22 in in IN 10_1101-2020_09_09_289074 28 23 order order NN 10_1101-2020_09_09_289074 28 24 to to TO 10_1101-2020_09_09_289074 28 25 exploit exploit VB 10_1101-2020_09_09_289074 28 26 the the DT 10_1101-2020_09_09_289074 28 27 N n NN 10_1101-2020_09_09_289074 28 28 - - HYPH 10_1101-2020_09_09_289074 28 29 terminal terminal NN 10_1101-2020_09_09_289074 28 30 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 28 31 peptidase peptidase NN 10_1101-2020_09_09_289074 28 32 domain domain NN 10_1101-2020_09_09_289074 28 33 conformation conformation NN 10_1101-2020_09_09_289074 28 34 . . . 10_1101-2020_09_09_289074 29 1 As as IN 10_1101-2020_09_09_289074 29 2 a a DT 10_1101-2020_09_09_289074 29 3 result result NN 10_1101-2020_09_09_289074 29 4 , , , 10_1101-2020_09_09_289074 29 5 SARS SARS NNP 10_1101-2020_09_09_289074 29 6 - - HYPH 10_1101-2020_09_09_289074 29 7 CoV- CoV- NNP 10_1101-2020_09_09_289074 29 8 2 2 CD 10_1101-2020_09_09_289074 29 9 Spike Spike NNP 10_1101-2020_09_09_289074 29 10 can can MD 10_1101-2020_09_09_289074 29 11 establish establish VB 10_1101-2020_09_09_289074 29 12 a a DT 10_1101-2020_09_09_289074 29 13 strong strong JJ 10_1101-2020_09_09_289074 29 14 interaction interaction NN 10_1101-2020_09_09_289074 29 15 with with IN 10_1101-2020_09_09_289074 29 16 the the DT 10_1101-2020_09_09_289074 29 17 human human JJ 10_1101-2020_09_09_289074 29 18 cell cell NN 10_1101-2020_09_09_289074 29 19 surface surface NN 10_1101-2020_09_09_289074 29 20 , , , 10_1101-2020_09_09_289074 29 21 allowing allow VBG 10_1101-2020_09_09_289074 29 22 the the DT 10_1101-2020_09_09_289074 29 23 virus virus NN 10_1101-2020_09_09_289074 29 24 to to TO 10_1101-2020_09_09_289074 29 25 fuse fuse VB 10_1101-2020_09_09_289074 29 26 its -PRON- PRP$ 10_1101-2020_09_09_289074 29 27 membrane membrane NN 10_1101-2020_09_09_289074 29 28 with with IN 10_1101-2020_09_09_289074 29 29 that that DT 10_1101-2020_09_09_289074 29 30 of of IN 10_1101-2020_09_09_289074 29 31 the the DT 10_1101-2020_09_09_289074 29 32 host host NN 10_1101-2020_09_09_289074 29 33 cell cell NN 10_1101-2020_09_09_289074 29 34 , , , 10_1101-2020_09_09_289074 29 35 releasing release VBG 10_1101-2020_09_09_289074 29 36 its -PRON- PRP$ 10_1101-2020_09_09_289074 29 37 proteins protein NNS 10_1101-2020_09_09_289074 29 38 and and CC 10_1101-2020_09_09_289074 29 39 genetic genetic JJ 10_1101-2020_09_09_289074 29 40 material material NN 10_1101-2020_09_09_289074 29 41 and and CC 10_1101-2020_09_09_289074 29 42 starting start VBG 10_1101-2020_09_09_289074 29 43 its -PRON- PRP$ 10_1101-2020_09_09_289074 29 44 replication replication NN 10_1101-2020_09_09_289074 29 45 cycle cycle NN 10_1101-2020_09_09_289074 29 46 ( ( -LRB- 10_1101-2020_09_09_289074 29 47 5 5 CD 10_1101-2020_09_09_289074 29 48 ) ) -RRB- 10_1101-2020_09_09_289074 29 49 . . . 10_1101-2020_09_09_289074 30 1 While while IN 10_1101-2020_09_09_289074 30 2 SARS SARS NNP 10_1101-2020_09_09_289074 30 3 - - HYPH 10_1101-2020_09_09_289074 30 4 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 30 5 shows show VBZ 10_1101-2020_09_09_289074 30 6 low low JJ 10_1101-2020_09_09_289074 30 7 mutability mutability NN 10_1101-2020_09_09_289074 30 8 ( ( -LRB- 10_1101-2020_09_09_289074 30 9 14 14 CD 10_1101-2020_09_09_289074 30 10 ) ) -RRB- 10_1101-2020_09_09_289074 30 11 , , , 10_1101-2020_09_09_289074 30 12 with with IN 10_1101-2020_09_09_289074 30 13 less less JJR 10_1101-2020_09_09_289074 30 14 than than IN 10_1101-2020_09_09_289074 30 15 25 25 CD 10_1101-2020_09_09_289074 30 16 predicted predict VBN 10_1101-2020_09_09_289074 30 17 events event NNS 10_1101-2020_09_09_289074 30 18 / / SYM 10_1101-2020_09_09_289074 30 19 year year NN 10_1101-2020_09_09_289074 30 20 ( ( -LRB- 10_1101-2020_09_09_289074 30 21 15 15 CD 10_1101-2020_09_09_289074 30 22 ) ) -RRB- 10_1101-2020_09_09_289074 30 23 , , , 10_1101-2020_09_09_289074 30 24 the the DT 10_1101-2020_09_09_289074 30 25 virus virus NN 10_1101-2020_09_09_289074 30 26 is be VBZ 10_1101-2020_09_09_289074 30 27 in in IN 10_1101-2020_09_09_289074 30 28 continuous continuous JJ 10_1101-2020_09_09_289074 30 29 evolution evolution NN 10_1101-2020_09_09_289074 30 30 from from IN 10_1101-2020_09_09_289074 30 31 the the DT 10_1101-2020_09_09_289074 30 32 original original JJ 10_1101-2020_09_09_289074 30 33 Wuhan Wuhan NNP 10_1101-2020_09_09_289074 30 34 reference reference NN 10_1101-2020_09_09_289074 30 35 sequence sequence NN 10_1101-2020_09_09_289074 30 36 ( ( -LRB- 10_1101-2020_09_09_289074 30 37 NC_045512.2 NC_045512.2 NNP 10_1101-2020_09_09_289074 30 38 ) ) -RRB- 10_1101-2020_09_09_289074 30 39 ( ( -LRB- 10_1101-2020_09_09_289074 30 40 16 16 CD 10_1101-2020_09_09_289074 30 41 ) ) -RRB- 10_1101-2020_09_09_289074 30 42 , , , 10_1101-2020_09_09_289074 30 43 and and CC 10_1101-2020_09_09_289074 30 44 there there EX 10_1101-2020_09_09_289074 30 45 are be VBP 10_1101-2020_09_09_289074 30 46 currently currently RB 10_1101-2020_09_09_289074 30 47 at at IN 10_1101-2020_09_09_289074 30 48 least least RBS 10_1101-2020_09_09_289074 30 49 6 6 CD 10_1101-2020_09_09_289074 30 50 major major JJ 10_1101-2020_09_09_289074 30 51 variants variant NNS 10_1101-2020_09_09_289074 30 52 circulating circulate VBG 10_1101-2020_09_09_289074 30 53 in in IN 10_1101-2020_09_09_289074 30 54 the the DT 10_1101-2020_09_09_289074 30 55 population population NN 10_1101-2020_09_09_289074 30 56 ( ( -LRB- 10_1101-2020_09_09_289074 30 57 3 3 CD 10_1101-2020_09_09_289074 30 58 , , , 10_1101-2020_09_09_289074 30 59 17 17 CD 10_1101-2020_09_09_289074 30 60 ) ) -RRB- 10_1101-2020_09_09_289074 30 61 . . . 10_1101-2020_09_09_289074 31 1 Some some DT 10_1101-2020_09_09_289074 31 2 of of IN 10_1101-2020_09_09_289074 31 3 these these DT 10_1101-2020_09_09_289074 31 4 strains strain NNS 10_1101-2020_09_09_289074 31 5 are be VBP 10_1101-2020_09_09_289074 31 6 characterized characterize VBN 10_1101-2020_09_09_289074 31 7 by by IN 10_1101-2020_09_09_289074 31 8 a a DT 10_1101-2020_09_09_289074 31 9 mutation mutation NN 10_1101-2020_09_09_289074 31 10 in in IN 10_1101-2020_09_09_289074 31 11 Spike Spike NNP 10_1101-2020_09_09_289074 31 12 , , , 10_1101-2020_09_09_289074 31 13 at at IN 10_1101-2020_09_09_289074 31 14 AA AA NNP 10_1101-2020_09_09_289074 31 15 614 614 CD 10_1101-2020_09_09_289074 31 16 , , , 10_1101-2020_09_09_289074 31 17 whereas whereas IN 10_1101-2020_09_09_289074 31 18 an an DT 10_1101-2020_09_09_289074 31 19 Aspartic aspartic JJ 10_1101-2020_09_09_289074 31 20 Acid Acid NNP 10_1101-2020_09_09_289074 31 21 ( ( -LRB- 10_1101-2020_09_09_289074 31 22 D d NN 10_1101-2020_09_09_289074 31 23 ) ) -RRB- 10_1101-2020_09_09_289074 31 24 is be VBZ 10_1101-2020_09_09_289074 31 25 substituted substitute VBN 10_1101-2020_09_09_289074 31 26 by by IN 10_1101-2020_09_09_289074 31 27 a a DT 10_1101-2020_09_09_289074 31 28 Glycine Glycine NNP 10_1101-2020_09_09_289074 31 29 ( ( -LRB- 10_1101-2020_09_09_289074 31 30 G G NNP 10_1101-2020_09_09_289074 31 31 ) ) -RRB- 10_1101-2020_09_09_289074 31 32 ( ( -LRB- 10_1101-2020_09_09_289074 31 33 18 18 CD 10_1101-2020_09_09_289074 31 34 ) ) -RRB- 10_1101-2020_09_09_289074 31 35 . . . 10_1101-2020_09_09_289074 32 1 In in IN 10_1101-2020_09_09_289074 32 2 fact fact NN 10_1101-2020_09_09_289074 32 3 , , , 10_1101-2020_09_09_289074 32 4 the the DT 10_1101-2020_09_09_289074 32 5 Spike Spike NNP 10_1101-2020_09_09_289074 32 6 D614 D614 NNP 10_1101-2020_09_09_289074 32 7 G G NNP 10_1101-2020_09_09_289074 32 8 mutation mutation NN 10_1101-2020_09_09_289074 32 9 gives give VBZ 10_1101-2020_09_09_289074 32 10 the the DT 10_1101-2020_09_09_289074 32 11 name name NN 10_1101-2020_09_09_289074 32 12 to to IN 10_1101-2020_09_09_289074 32 13 the the DT 10_1101-2020_09_09_289074 32 14 most most RBS 10_1101-2020_09_09_289074 32 15 frequent frequent JJ 10_1101-2020_09_09_289074 32 16 viral viral JJ 10_1101-2020_09_09_289074 32 17 clade clade NN 10_1101-2020_09_09_289074 32 18 ( ( -LRB- 10_1101-2020_09_09_289074 32 19 G G NNP 10_1101-2020_09_09_289074 32 20 ) ) -RRB- 10_1101-2020_09_09_289074 32 21 , , , 10_1101-2020_09_09_289074 32 22 which which WDT 10_1101-2020_09_09_289074 32 23 was be VBD 10_1101-2020_09_09_289074 32 24 first first RB 10_1101-2020_09_09_289074 32 25 detected detect VBN 10_1101-2020_09_09_289074 32 26 in in IN 10_1101-2020_09_09_289074 32 27 Europe Europe NNP 10_1101-2020_09_09_289074 32 28 at at IN 10_1101-2020_09_09_289074 32 29 the the DT 10_1101-2020_09_09_289074 32 30 end end NN 10_1101-2020_09_09_289074 32 31 of of IN 10_1101-2020_09_09_289074 32 32 January January NNP 10_1101-2020_09_09_289074 32 33 2020 2020 CD 10_1101-2020_09_09_289074 32 34 , , , 10_1101-2020_09_09_289074 32 35 and and CC 10_1101-2020_09_09_289074 32 36 is be VBZ 10_1101-2020_09_09_289074 32 37 currently currently RB 10_1101-2020_09_09_289074 32 38 present present JJ 10_1101-2020_09_09_289074 32 39 in in IN 10_1101-2020_09_09_289074 32 40 all all DT 10_1101-2020_09_09_289074 32 41 continents continent NNS 10_1101-2020_09_09_289074 32 42 , , , 10_1101-2020_09_09_289074 32 43 with with IN 10_1101-2020_09_09_289074 32 44 increasing increase VBG 10_1101-2020_09_09_289074 32 45 frequency frequency NN 10_1101-2020_09_09_289074 32 46 over over IN 10_1101-2020_09_09_289074 32 47 time time NN 10_1101-2020_09_09_289074 32 48 ( ( -LRB- 10_1101-2020_09_09_289074 32 49 3 3 CD 10_1101-2020_09_09_289074 32 50 ) ) -RRB- 10_1101-2020_09_09_289074 32 51 . . . 10_1101-2020_09_09_289074 33 1 D614 D614 NNP 10_1101-2020_09_09_289074 33 2 G g NN 10_1101-2020_09_09_289074 33 3 does do VBZ 10_1101-2020_09_09_289074 33 4 not not RB 10_1101-2020_09_09_289074 33 5 fall fall VB 10_1101-2020_09_09_289074 33 6 within within IN 10_1101-2020_09_09_289074 33 7 the the DT 10_1101-2020_09_09_289074 33 8 putative putative JJ 10_1101-2020_09_09_289074 33 9 RBD RBD NNP 10_1101-2020_09_09_289074 33 10 ( ( -LRB- 10_1101-2020_09_09_289074 33 11 AA AA NNP 10_1101-2020_09_09_289074 33 12 ~330 ~330 FW 10_1101-2020_09_09_289074 33 13 - - HYPH 10_1101-2020_09_09_289074 33 14 530 530 CD 10_1101-2020_09_09_289074 33 15 ) ) -RRB- 10_1101-2020_09_09_289074 33 16 , , , 10_1101-2020_09_09_289074 33 17 but but CC 10_1101-2020_09_09_289074 33 18 some some DT 10_1101-2020_09_09_289074 33 19 studies study NNS 10_1101-2020_09_09_289074 33 20 suggest suggest VBP 10_1101-2020_09_09_289074 33 21 it -PRON- PRP 10_1101-2020_09_09_289074 33 22 may may MD 10_1101-2020_09_09_289074 33 23 have have VB 10_1101-2020_09_09_289074 33 24 a a DT 10_1101-2020_09_09_289074 33 25 clinically clinically RB 10_1101-2020_09_09_289074 33 26 relevant relevant JJ 10_1101-2020_09_09_289074 33 27 role role NN 10_1101-2020_09_09_289074 33 28 : : : 10_1101-2020_09_09_289074 33 29 D614 D614 NNP 10_1101-2020_09_09_289074 33 30 G g NN 10_1101-2020_09_09_289074 33 31 is be VBZ 10_1101-2020_09_09_289074 33 32 positively positively RB 10_1101-2020_09_09_289074 33 33 correlated correlate VBN 10_1101-2020_09_09_289074 33 34 with with IN 10_1101-2020_09_09_289074 33 35 increased increase VBN 10_1101-2020_09_09_289074 33 36 case case NN 10_1101-2020_09_09_289074 33 37 fatality fatality NN 10_1101-2020_09_09_289074 33 38 rate rate NN 10_1101-2020_09_09_289074 33 39 ( ( -LRB- 10_1101-2020_09_09_289074 33 40 19 19 CD 10_1101-2020_09_09_289074 33 41 ) ) -RRB- 10_1101-2020_09_09_289074 33 42 , , , 10_1101-2020_09_09_289074 33 43 and and CC 10_1101-2020_09_09_289074 33 44 it -PRON- PRP 10_1101-2020_09_09_289074 33 45 shows show VBZ 10_1101-2020_09_09_289074 33 46 increased increase VBN 10_1101-2020_09_09_289074 33 47 transmissibility transmissibility NN 10_1101-2020_09_09_289074 33 48 and and CC 10_1101-2020_09_09_289074 33 49 infectivity infectivity NN 10_1101-2020_09_09_289074 33 50 compared compare VBN 10_1101-2020_09_09_289074 33 51 to to IN 10_1101-2020_09_09_289074 33 52 the the DT 10_1101-2020_09_09_289074 33 53 reference reference NN 10_1101-2020_09_09_289074 33 54 genome genome JJ 10_1101-2020_09_09_289074 33 55 ( ( -LRB- 10_1101-2020_09_09_289074 33 56 20 20 CD 10_1101-2020_09_09_289074 33 57 ) ) -RRB- 10_1101-2020_09_09_289074 33 58 . . . 10_1101-2020_09_09_289074 34 1 In in IN 10_1101-2020_09_09_289074 34 2 vitro vitro FW 10_1101-2020_09_09_289074 34 3 studies study NNS 10_1101-2020_09_09_289074 34 4 show show VBP 10_1101-2020_09_09_289074 34 5 that that IN 10_1101-2020_09_09_289074 34 6 viruses virus NNS 10_1101-2020_09_09_289074 34 7 carrying carry VBG 10_1101-2020_09_09_289074 34 8 the the DT 10_1101-2020_09_09_289074 34 9 D614 D614 NNP 10_1101-2020_09_09_289074 34 10 G G NNP 10_1101-2020_09_09_289074 34 11 Spike Spike NNP 10_1101-2020_09_09_289074 34 12 mutation mutation NN 10_1101-2020_09_09_289074 34 13 have have VBP 10_1101-2020_09_09_289074 34 14 an an DT 10_1101-2020_09_09_289074 34 15 increased increase VBN 10_1101-2020_09_09_289074 34 16 viral viral JJ 10_1101-2020_09_09_289074 34 17 load load NN 10_1101-2020_09_09_289074 34 18 and and CC 10_1101-2020_09_09_289074 34 19 cytopathic cytopathic JJ 10_1101-2020_09_09_289074 34 20 effect effect NN 10_1101-2020_09_09_289074 34 21 in in IN 10_1101-2020_09_09_289074 34 22 cultured cultured JJ 10_1101-2020_09_09_289074 34 23 Vero Vero NNP 10_1101-2020_09_09_289074 34 24 cells cell NNS 10_1101-2020_09_09_289074 34 25 ( ( -LRB- 10_1101-2020_09_09_289074 34 26 16 16 CD 10_1101-2020_09_09_289074 34 27 ) ) -RRB- 10_1101-2020_09_09_289074 34 28 . . . 10_1101-2020_09_09_289074 35 1 Despite despite IN 10_1101-2020_09_09_289074 35 2 these these DT 10_1101-2020_09_09_289074 35 3 preliminary preliminary JJ 10_1101-2020_09_09_289074 35 4 observations observation NNS 10_1101-2020_09_09_289074 35 5 , , , 10_1101-2020_09_09_289074 35 6 there there EX 10_1101-2020_09_09_289074 35 7 are be VBP 10_1101-2020_09_09_289074 35 8 still still RB 10_1101-2020_09_09_289074 35 9 several several JJ 10_1101-2020_09_09_289074 35 10 doubts doubt NNS 10_1101-2020_09_09_289074 35 11 on on IN 10_1101-2020_09_09_289074 35 12 the the DT 10_1101-2020_09_09_289074 35 13 molecular molecular JJ 10_1101-2020_09_09_289074 35 14 effects effect NNS 10_1101-2020_09_09_289074 35 15 of of IN 10_1101-2020_09_09_289074 35 16 the the DT 10_1101-2020_09_09_289074 35 17 D614 D614 NNP 10_1101-2020_09_09_289074 35 18 G G NNP 10_1101-2020_09_09_289074 35 19 variant variant NN 10_1101-2020_09_09_289074 35 20 ( ( -LRB- 10_1101-2020_09_09_289074 35 21 21 21 CD 10_1101-2020_09_09_289074 35 22 ) ) -RRB- 10_1101-2020_09_09_289074 35 23 . . . 10_1101-2020_09_09_289074 36 1 Other other JJ 10_1101-2020_09_09_289074 36 2 recurring recur VBG 10_1101-2020_09_09_289074 36 3 Spike Spike NNP 10_1101-2020_09_09_289074 36 4 mutations mutation NNS 10_1101-2020_09_09_289074 36 5 have have VBP 10_1101-2020_09_09_289074 36 6 been be VBN 10_1101-2020_09_09_289074 36 7 observed observe VBN 10_1101-2020_09_09_289074 36 8 in in IN 10_1101-2020_09_09_289074 36 9 the the DT 10_1101-2020_09_09_289074 36 10 population population NN 10_1101-2020_09_09_289074 36 11 worldwide worldwide RB 10_1101-2020_09_09_289074 36 12 , , , 10_1101-2020_09_09_289074 36 13 however however RB 10_1101-2020_09_09_289074 36 14 at at IN 10_1101-2020_09_09_289074 36 15 frequencies frequency NNS 10_1101-2020_09_09_289074 36 16 of of IN 10_1101-2020_09_09_289074 36 17 1 1 CD 10_1101-2020_09_09_289074 36 18 % % NN 10_1101-2020_09_09_289074 36 19 or or CC 10_1101-2020_09_09_289074 36 20 below below IN 10_1101-2020_09_09_289074 36 21 ( ( -LRB- 10_1101-2020_09_09_289074 36 22 3 3 CD 10_1101-2020_09_09_289074 36 23 ) ) -RRB- 10_1101-2020_09_09_289074 36 24 ; ; : 10_1101-2020_09_09_289074 36 25 some some DT 10_1101-2020_09_09_289074 36 26 of of IN 10_1101-2020_09_09_289074 36 27 these these DT 10_1101-2020_09_09_289074 36 28 mutations mutation NNS 10_1101-2020_09_09_289074 36 29 fall fall VBP 10_1101-2020_09_09_289074 36 30 within within IN 10_1101-2020_09_09_289074 36 31 the the DT 10_1101-2020_09_09_289074 36 32 RBD rbd NN 10_1101-2020_09_09_289074 36 33 and and CC 10_1101-2020_09_09_289074 36 34 therefore therefore RB 10_1101-2020_09_09_289074 36 35 may may MD 10_1101-2020_09_09_289074 36 36 have have VB 10_1101-2020_09_09_289074 36 37 a a DT 10_1101-2020_09_09_289074 36 38 direct direct JJ 10_1101-2020_09_09_289074 36 39 role role NN 10_1101-2020_09_09_289074 36 40 in in IN 10_1101-2020_09_09_289074 36 41 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 36 42 interaction interaction NN 10_1101-2020_09_09_289074 36 43 . . . 10_1101-2020_09_09_289074 37 1 On on IN 10_1101-2020_09_09_289074 37 2 the the DT 10_1101-2020_09_09_289074 37 3 other other JJ 10_1101-2020_09_09_289074 37 4 hand hand NN 10_1101-2020_09_09_289074 37 5 , , , 10_1101-2020_09_09_289074 37 6 genetic genetic JJ 10_1101-2020_09_09_289074 37 7 variants variant NNS 10_1101-2020_09_09_289074 37 8 of of IN 10_1101-2020_09_09_289074 37 9 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 37 10 in in IN 10_1101-2020_09_09_289074 37 11 human human JJ 10_1101-2020_09_09_289074 37 12 population population NN 10_1101-2020_09_09_289074 37 13 may may MD 10_1101-2020_09_09_289074 37 14 influence influence VB 10_1101-2020_09_09_289074 37 15 susceptibility susceptibility NN 10_1101-2020_09_09_289074 37 16 or or CC 10_1101-2020_09_09_289074 37 17 resistance resistance NN 10_1101-2020_09_09_289074 37 18 to to IN 10_1101-2020_09_09_289074 37 19 SARS SARS NNP 10_1101-2020_09_09_289074 37 20 - - HYPH 10_1101-2020_09_09_289074 37 21 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 37 22 infection infection NN 10_1101-2020_09_09_289074 37 23 , , , 10_1101-2020_09_09_289074 37 24 possibly possibly RB 10_1101-2020_09_09_289074 37 25 contributing contribute VBG 10_1101-2020_09_09_289074 37 26 to to IN 10_1101-2020_09_09_289074 37 27 the the DT 10_1101-2020_09_09_289074 37 28 difference difference NN 10_1101-2020_09_09_289074 37 29 in in IN 10_1101-2020_09_09_289074 37 30 clinical clinical JJ 10_1101-2020_09_09_289074 37 31 features feature NNS 10_1101-2020_09_09_289074 37 32 observed observe VBN 10_1101-2020_09_09_289074 37 33 in in IN 10_1101-2020_09_09_289074 37 34 COVID-19 covid-19 JJ 10_1101-2020_09_09_289074 37 35 patients patient NNS 10_1101-2020_09_09_289074 37 36 ( ( -LRB- 10_1101-2020_09_09_289074 37 37 22 22 CD 10_1101-2020_09_09_289074 37 38 ) ) -RRB- 10_1101-2020_09_09_289074 37 39 . . . 10_1101-2020_09_09_289074 38 1 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 38 2 gene gene NN 10_1101-2020_09_09_289074 38 3 is be VBZ 10_1101-2020_09_09_289074 38 4 located locate VBN 10_1101-2020_09_09_289074 38 5 on on IN 10_1101-2020_09_09_289074 38 6 chromosome chromosome NN 10_1101-2020_09_09_289074 38 7 Xp22.2 Xp22.2 NNS 10_1101-2020_09_09_289074 38 8 and and CC 10_1101-2020_09_09_289074 38 9 consists consist VBZ 10_1101-2020_09_09_289074 38 10 of of IN 10_1101-2020_09_09_289074 38 11 18 18 CD 10_1101-2020_09_09_289074 38 12 exons exon NNS 10_1101-2020_09_09_289074 38 13 , , , 10_1101-2020_09_09_289074 38 14 coding code VBG 10_1101-2020_09_09_289074 38 15 for for IN 10_1101-2020_09_09_289074 38 16 an an DT 10_1101-2020_09_09_289074 38 17 805 805 CD 10_1101-2020_09_09_289074 38 18 AAs aa NNS 10_1101-2020_09_09_289074 38 19 long long JJ 10_1101-2020_09_09_289074 38 20 protein protein NN 10_1101-2020_09_09_289074 38 21 exposed expose VBN 10_1101-2020_09_09_289074 38 22 on on IN 10_1101-2020_09_09_289074 38 23 the the DT 10_1101-2020_09_09_289074 38 24 cell cell NN 10_1101-2020_09_09_289074 38 25 surface surface NN 10_1101-2020_09_09_289074 38 26 of of IN 10_1101-2020_09_09_289074 38 27 a a DT 10_1101-2020_09_09_289074 38 28 variety variety NN 10_1101-2020_09_09_289074 38 29 of of IN 10_1101-2020_09_09_289074 38 30 human human JJ 10_1101-2020_09_09_289074 38 31 organs organ NNS 10_1101-2020_09_09_289074 38 32 , , , 10_1101-2020_09_09_289074 38 33 including include VBG 10_1101-2020_09_09_289074 38 34 kidneys kidney NNS 10_1101-2020_09_09_289074 38 35 , , , 10_1101-2020_09_09_289074 38 36 heart heart NN 10_1101-2020_09_09_289074 38 37 , , , 10_1101-2020_09_09_289074 38 38 brain brain NN 10_1101-2020_09_09_289074 38 39 , , , 10_1101-2020_09_09_289074 38 40 gastrointestinal gastrointestinal JJ 10_1101-2020_09_09_289074 38 41 tract tract NN 10_1101-2020_09_09_289074 38 42 , , , 10_1101-2020_09_09_289074 38 43 and and CC 10_1101-2020_09_09_289074 38 44 lungs lung NNS 10_1101-2020_09_09_289074 38 45 ( ( -LRB- 10_1101-2020_09_09_289074 38 46 23 23 CD 10_1101-2020_09_09_289074 38 47 ) ) -RRB- 10_1101-2020_09_09_289074 38 48 . . . 10_1101-2020_09_09_289074 39 1 It -PRON- PRP 10_1101-2020_09_09_289074 39 2 is be VBZ 10_1101-2020_09_09_289074 39 3 unclear unclear JJ 10_1101-2020_09_09_289074 39 4 if if IN 10_1101-2020_09_09_289074 39 5 tissue tissue NN 10_1101-2020_09_09_289074 39 6 - - HYPH 10_1101-2020_09_09_289074 39 7 expression expression NN 10_1101-2020_09_09_289074 39 8 patterns pattern NNS 10_1101-2020_09_09_289074 39 9 of of IN 10_1101-2020_09_09_289074 39 10 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 39 11 may may MD 10_1101-2020_09_09_289074 39 12 be be VB 10_1101-2020_09_09_289074 39 13 linked link VBN 10_1101-2020_09_09_289074 39 14 to to IN 10_1101-2020_09_09_289074 39 15 the the DT 10_1101-2020_09_09_289074 39 16 severity severity NN 10_1101-2020_09_09_289074 39 17 of of IN 10_1101-2020_09_09_289074 39 18 symptoms symptom NNS 10_1101-2020_09_09_289074 39 19 or or CC 10_1101-2020_09_09_289074 39 20 outcomes outcome NNS 10_1101-2020_09_09_289074 39 21 of of IN 10_1101-2020_09_09_289074 39 22 SARS SARS NNP 10_1101-2020_09_09_289074 39 23 - - HYPH 10_1101-2020_09_09_289074 39 24 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 39 25 infections infection NNS 10_1101-2020_09_09_289074 39 26 ; ; : 10_1101-2020_09_09_289074 39 27 however however RB 10_1101-2020_09_09_289074 39 28 , , , 10_1101-2020_09_09_289074 39 29 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 39 30 levels level NNS 10_1101-2020_09_09_289074 39 31 in in IN 10_1101-2020_09_09_289074 39 32 lungs lung NNS 10_1101-2020_09_09_289074 39 33 were be VBD 10_1101-2020_09_09_289074 39 34 found find VBN 10_1101-2020_09_09_289074 39 35 to to TO 10_1101-2020_09_09_289074 39 36 be be VB 10_1101-2020_09_09_289074 39 37 increased increase VBN 10_1101-2020_09_09_289074 39 38 in in IN 10_1101-2020_09_09_289074 39 39 patients patient NNS 10_1101-2020_09_09_289074 39 40 with with IN 10_1101-2020_09_09_289074 39 41 comorbidities comorbiditie NNS 10_1101-2020_09_09_289074 39 42 associated associate VBN 10_1101-2020_09_09_289074 39 43 to to IN 10_1101-2020_09_09_289074 39 44 severe severe JJ 10_1101-2020_09_09_289074 39 45 COVID-19 COVID-19 , 10_1101-2020_09_09_289074 39 46 clinical clinical JJ 10_1101-2020_09_09_289074 39 47 manifestations manifestation NNS 10_1101-2020_09_09_289074 39 48 ( ( -LRB- 10_1101-2020_09_09_289074 39 49 24 24 CD 10_1101-2020_09_09_289074 39 50 ) ) -RRB- 10_1101-2020_09_09_289074 39 51 , , , 10_1101-2020_09_09_289074 39 52 whereas whereas IN 10_1101-2020_09_09_289074 39 53 polymorphisms polymorphism NNS 10_1101-2020_09_09_289074 39 54 of of IN 10_1101-2020_09_09_289074 39 55 ACE2 ACE2 NNS 10_1101-2020_09_09_289074 39 56 have have VBP 10_1101-2020_09_09_289074 39 57 been be VBN 10_1101-2020_09_09_289074 39 58 already already RB 10_1101-2020_09_09_289074 39 59 described describe VBN 10_1101-2020_09_09_289074 39 60 to to TO 10_1101-2020_09_09_289074 39 61 play play VB 10_1101-2020_09_09_289074 39 62 a a DT 10_1101-2020_09_09_289074 39 63 role role NN 10_1101-2020_09_09_289074 39 64 in in IN 10_1101-2020_09_09_289074 39 65 hypertension hypertension NN 10_1101-2020_09_09_289074 39 66 and and CC 10_1101-2020_09_09_289074 39 67 cardiovascular cardiovascular JJ 10_1101-2020_09_09_289074 39 68 diseases disease NNS 10_1101-2020_09_09_289074 39 69 ( ( -LRB- 10_1101-2020_09_09_289074 39 70 25 25 CD 10_1101-2020_09_09_289074 39 71 ) ) -RRB- 10_1101-2020_09_09_289074 39 72 , , , 10_1101-2020_09_09_289074 39 73 particularly particularly RB 10_1101-2020_09_09_289074 39 74 in in IN 10_1101-2020_09_09_289074 39 75 association association NN 10_1101-2020_09_09_289074 39 76 with with IN 10_1101-2020_09_09_289074 39 77 type type NN 10_1101-2020_09_09_289074 39 78 2 2 CD 10_1101-2020_09_09_289074 39 79 diabetes diabetes NN 10_1101-2020_09_09_289074 39 80 ( ( -LRB- 10_1101-2020_09_09_289074 39 81 23 23 CD 10_1101-2020_09_09_289074 39 82 ) ) -RRB- 10_1101-2020_09_09_289074 39 83 , , , 10_1101-2020_09_09_289074 39 84 all all DT 10_1101-2020_09_09_289074 39 85 conditions condition NNS 10_1101-2020_09_09_289074 39 86 predisposing predispose VBG 10_1101-2020_09_09_289074 39 87 to to IN 10_1101-2020_09_09_289074 39 88 an an DT 10_1101-2020_09_09_289074 39 89 increased increase VBN 10_1101-2020_09_09_289074 39 90 risk risk NN 10_1101-2020_09_09_289074 39 91 of of IN 10_1101-2020_09_09_289074 39 92 dying die VBG 10_1101-2020_09_09_289074 39 93 from from IN 10_1101-2020_09_09_289074 39 94 COVID-19 covid-19 JJ 10_1101-2020_09_09_289074 39 95 ( ( -LRB- 10_1101-2020_09_09_289074 39 96 26 26 CD 10_1101-2020_09_09_289074 39 97 ) ) -RRB- 10_1101-2020_09_09_289074 39 98 . . . 10_1101-2020_09_09_289074 40 1 Despite despite IN 10_1101-2020_09_09_289074 40 2 early early JJ 10_1101-2020_09_09_289074 40 3 studies study NNS 10_1101-2020_09_09_289074 40 4 , , , 10_1101-2020_09_09_289074 40 5 the the DT 10_1101-2020_09_09_289074 40 6 presence presence NN 10_1101-2020_09_09_289074 40 7 of of IN 10_1101-2020_09_09_289074 40 8 Spike Spike NNP 10_1101-2020_09_09_289074 40 9 mutations mutation NNS 10_1101-2020_09_09_289074 40 10 potentially potentially RB 10_1101-2020_09_09_289074 40 11 altering alter VBG 10_1101-2020_09_09_289074 40 12 the the DT 10_1101-2020_09_09_289074 40 13 binding binding NN 10_1101-2020_09_09_289074 40 14 with with IN 10_1101-2020_09_09_289074 40 15 .CC .CC NFP 10_1101-2020_09_09_289074 40 16 - - HYPH 10_1101-2020_09_09_289074 40 17 BY by IN 10_1101-2020_09_09_289074 40 18 - - HYPH 10_1101-2020_09_09_289074 40 19 NC NC NNP 10_1101-2020_09_09_289074 40 20 - - HYPH 10_1101-2020_09_09_289074 40 21 ND ND NNP 10_1101-2020_09_09_289074 40 22 4.0 4.0 CD 10_1101-2020_09_09_289074 40 23 International International NNP 10_1101-2020_09_09_289074 40 24 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 40 25 under under IN 10_1101-2020_09_09_289074 40 26 a a DT 10_1101-2020_09_09_289074 40 27 ( ( -LRB- 10_1101-2020_09_09_289074 40 28 which which WDT 10_1101-2020_09_09_289074 40 29 was be VBD 10_1101-2020_09_09_289074 40 30 not not RB 10_1101-2020_09_09_289074 40 31 certified certify VBN 10_1101-2020_09_09_289074 40 32 by by IN 10_1101-2020_09_09_289074 40 33 peer peer NN 10_1101-2020_09_09_289074 40 34 review review NN 10_1101-2020_09_09_289074 40 35 ) ) -RRB- 10_1101-2020_09_09_289074 40 36 is be VBZ 10_1101-2020_09_09_289074 40 37 the the DT 10_1101-2020_09_09_289074 40 38 author author NN 10_1101-2020_09_09_289074 40 39 / / SYM 10_1101-2020_09_09_289074 40 40 funder funder NN 10_1101-2020_09_09_289074 40 41 , , , 10_1101-2020_09_09_289074 40 42 who who WP 10_1101-2020_09_09_289074 40 43 has have VBZ 10_1101-2020_09_09_289074 40 44 granted grant VBN 10_1101-2020_09_09_289074 40 45 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 40 46 a a DT 10_1101-2020_09_09_289074 40 47 license license NN 10_1101-2020_09_09_289074 40 48 to to TO 10_1101-2020_09_09_289074 40 49 display display VB 10_1101-2020_09_09_289074 40 50 the the DT 10_1101-2020_09_09_289074 40 51 preprint preprint NN 10_1101-2020_09_09_289074 40 52 in in IN 10_1101-2020_09_09_289074 40 53 perpetuity perpetuity NN 10_1101-2020_09_09_289074 40 54 . . . 10_1101-2020_09_09_289074 41 1 It -PRON- PRP 10_1101-2020_09_09_289074 41 2 is be VBZ 10_1101-2020_09_09_289074 41 3 made make VBN 10_1101-2020_09_09_289074 41 4 The the DT 10_1101-2020_09_09_289074 41 5 copyright copyright NN 10_1101-2020_09_09_289074 41 6 holder holder NN 10_1101-2020_09_09_289074 41 7 for for IN 10_1101-2020_09_09_289074 41 8 this this DT 10_1101-2020_09_09_289074 41 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 41 10 version version NN 10_1101-2020_09_09_289074 41 11 posted post VBD 10_1101-2020_09_09_289074 41 12 January January NNP 10_1101-2020_09_09_289074 41 13 5 5 CD 10_1101-2020_09_09_289074 41 14 , , , 10_1101-2020_09_09_289074 41 15 2021 2021 CD 10_1101-2020_09_09_289074 41 16 . . . 10_1101-2020_09_09_289074 41 17 ; ; : 10_1101-2020_09_09_289074 41 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 41 19 : : : 10_1101-2020_09_09_289074 41 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 41 21 preprint preprint NN 10_1101-2020_09_09_289074 41 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 41 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NN 10_1101-2020_09_09_289074 41 24 4 4 CD 10_1101-2020_09_09_289074 41 25 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 41 26 is be VBZ 10_1101-2020_09_09_289074 41 27 still still RB 10_1101-2020_09_09_289074 41 28 largely largely RB 10_1101-2020_09_09_289074 41 29 under under RB 10_1101-2020_09_09_289074 41 30 - - HYPH 10_1101-2020_09_09_289074 41 31 investigated investigate VBN 10_1101-2020_09_09_289074 41 32 , , , 10_1101-2020_09_09_289074 41 33 as as IN 10_1101-2020_09_09_289074 41 34 is be VBZ 10_1101-2020_09_09_289074 41 35 the the DT 10_1101-2020_09_09_289074 41 36 role role NN 10_1101-2020_09_09_289074 41 37 of of IN 10_1101-2020_09_09_289074 41 38 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 41 39 variants variant NNS 10_1101-2020_09_09_289074 41 40 in in IN 10_1101-2020_09_09_289074 41 41 the the DT 10_1101-2020_09_09_289074 41 42 human human JJ 10_1101-2020_09_09_289074 41 43 population population NN 10_1101-2020_09_09_289074 41 44 in in IN 10_1101-2020_09_09_289074 41 45 determining determine VBG 10_1101-2020_09_09_289074 41 46 patient patient NN 10_1101-2020_09_09_289074 41 47 - - HYPH 10_1101-2020_09_09_289074 41 48 specific specific JJ 10_1101-2020_09_09_289074 41 49 molecular molecular JJ 10_1101-2020_09_09_289074 41 50 interactions interaction NNS 10_1101-2020_09_09_289074 41 51 between between IN 10_1101-2020_09_09_289074 41 52 these these DT 10_1101-2020_09_09_289074 41 53 two two CD 10_1101-2020_09_09_289074 41 54 proteins protein NNS 10_1101-2020_09_09_289074 41 55 . . . 10_1101-2020_09_09_289074 42 1 In in IN 10_1101-2020_09_09_289074 42 2 the the DT 10_1101-2020_09_09_289074 42 3 present present JJ 10_1101-2020_09_09_289074 42 4 study study NN 10_1101-2020_09_09_289074 42 5 , , , 10_1101-2020_09_09_289074 42 6 we -PRON- PRP 10_1101-2020_09_09_289074 42 7 aim aim VBP 10_1101-2020_09_09_289074 42 8 at at IN 10_1101-2020_09_09_289074 42 9 detecting detect VBG 10_1101-2020_09_09_289074 42 10 which which WDT 10_1101-2020_09_09_289074 42 11 Spike Spike NNP 10_1101-2020_09_09_289074 42 12 and and CC 10_1101-2020_09_09_289074 42 13 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 42 14 AAs aa NNS 10_1101-2020_09_09_289074 42 15 are be VBP 10_1101-2020_09_09_289074 42 16 the the DT 10_1101-2020_09_09_289074 42 17 most most RBS 10_1101-2020_09_09_289074 42 18 important important JJ 10_1101-2020_09_09_289074 42 19 in in IN 10_1101-2020_09_09_289074 42 20 determining determine VBG 10_1101-2020_09_09_289074 42 21 the the DT 10_1101-2020_09_09_289074 42 22 SARS SARS NNP 10_1101-2020_09_09_289074 42 23 - - HYPH 10_1101-2020_09_09_289074 42 24 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 42 25 entry entry NNP 10_1101-2020_09_09_289074 42 26 interaction interaction NN 10_1101-2020_09_09_289074 42 27 and and CC 10_1101-2020_09_09_289074 42 28 analyze analyze VB 10_1101-2020_09_09_289074 42 29 which which WDT 10_1101-2020_09_09_289074 42 30 ones one NNS 10_1101-2020_09_09_289074 42 31 have have VBP 10_1101-2020_09_09_289074 42 32 already already RB 10_1101-2020_09_09_289074 42 33 mutated mutate VBN 10_1101-2020_09_09_289074 42 34 in in IN 10_1101-2020_09_09_289074 42 35 the the DT 10_1101-2020_09_09_289074 42 36 population population NN 10_1101-2020_09_09_289074 42 37 . . . 10_1101-2020_09_09_289074 43 1 The the DT 10_1101-2020_09_09_289074 43 2 task task NN 10_1101-2020_09_09_289074 43 3 is be VBZ 10_1101-2020_09_09_289074 43 4 clinically clinically RB 10_1101-2020_09_09_289074 43 5 relevant relevant JJ 10_1101-2020_09_09_289074 43 6 , , , 10_1101-2020_09_09_289074 43 7 providing provide VBG 10_1101-2020_09_09_289074 43 8 a a DT 10_1101-2020_09_09_289074 43 9 functional functional JJ 10_1101-2020_09_09_289074 43 10 characterization characterization NN 10_1101-2020_09_09_289074 43 11 of of IN 10_1101-2020_09_09_289074 43 12 present present JJ 10_1101-2020_09_09_289074 43 13 and and CC 10_1101-2020_09_09_289074 43 14 future future JJ 10_1101-2020_09_09_289074 43 15 mutations mutation NNS 10_1101-2020_09_09_289074 43 16 targeting target VBG 10_1101-2020_09_09_289074 43 17 the the DT 10_1101-2020_09_09_289074 43 18 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 43 19 / / SYM 10_1101-2020_09_09_289074 43 20 Spike Spike NNP 10_1101-2020_09_09_289074 43 21 binding bind VBG 10_1101-2020_09_09_289074 43 22 and and CC 10_1101-2020_09_09_289074 43 23 detected detect VBN 10_1101-2020_09_09_289074 43 24 by by IN 10_1101-2020_09_09_289074 43 25 sequencing sequence VBG 10_1101-2020_09_09_289074 43 26 SARS SARS NNP 10_1101-2020_09_09_289074 43 27 - - HYPH 10_1101-2020_09_09_289074 43 28 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 43 29 on on IN 10_1101-2020_09_09_289074 43 30 a a DT 10_1101-2020_09_09_289074 43 31 patient patient NN 10_1101-2020_09_09_289074 43 32 - - HYPH 10_1101-2020_09_09_289074 43 33 specific specific JJ 10_1101-2020_09_09_289074 43 34 basis basis NN 10_1101-2020_09_09_289074 43 35 . . . 10_1101-2020_09_09_289074 44 1 Characterizing characterize VBG 10_1101-2020_09_09_289074 44 2 the the DT 10_1101-2020_09_09_289074 44 3 variability variability NN 10_1101-2020_09_09_289074 44 4 of of IN 10_1101-2020_09_09_289074 44 5 both both DT 10_1101-2020_09_09_289074 44 6 proteins protein NNS 10_1101-2020_09_09_289074 44 7 must must MD 10_1101-2020_09_09_289074 44 8 be be VB 10_1101-2020_09_09_289074 44 9 taken take VBN 10_1101-2020_09_09_289074 44 10 in in IN 10_1101-2020_09_09_289074 44 11 consideration consideration NN 10_1101-2020_09_09_289074 44 12 in in IN 10_1101-2020_09_09_289074 44 13 the the DT 10_1101-2020_09_09_289074 44 14 process process NN 10_1101-2020_09_09_289074 44 15 of of IN 10_1101-2020_09_09_289074 44 16 developing develop VBG 10_1101-2020_09_09_289074 44 17 anti anti JJ 10_1101-2020_09_09_289074 44 18 - - JJ 10_1101-2020_09_09_289074 44 19 COVID-19 covid-19 JJ 10_1101-2020_09_09_289074 44 20 strategies strategy NNS 10_1101-2020_09_09_289074 44 21 , , , 10_1101-2020_09_09_289074 44 22 such such JJ 10_1101-2020_09_09_289074 44 23 as as IN 10_1101-2020_09_09_289074 44 24 the the DT 10_1101-2020_09_09_289074 44 25 Spike Spike NNP 10_1101-2020_09_09_289074 44 26 - - HYPH 10_1101-2020_09_09_289074 44 27 based base VBN 10_1101-2020_09_09_289074 44 28 vaccine vaccine NN 10_1101-2020_09_09_289074 44 29 currently currently RB 10_1101-2020_09_09_289074 44 30 deployed deploy VBN 10_1101-2020_09_09_289074 44 31 by by IN 10_1101-2020_09_09_289074 44 32 the the DT 10_1101-2020_09_09_289074 44 33 National National NNP 10_1101-2020_09_09_289074 44 34 Institute Institute NNP 10_1101-2020_09_09_289074 44 35 of of IN 10_1101-2020_09_09_289074 44 36 Allergy Allergy NNP 10_1101-2020_09_09_289074 44 37 and and CC 10_1101-2020_09_09_289074 44 38 Infectious Infectious NNP 10_1101-2020_09_09_289074 44 39 Diseases Diseases NNPS 10_1101-2020_09_09_289074 44 40 and and CC 10_1101-2020_09_09_289074 44 41 Moderna Moderna NNP 10_1101-2020_09_09_289074 44 42 ( ( -LRB- 10_1101-2020_09_09_289074 44 43 27 27 CD 10_1101-2020_09_09_289074 44 44 ) ) -RRB- 10_1101-2020_09_09_289074 44 45 . . . 10_1101-2020_09_09_289074 45 1 Results result NNS 10_1101-2020_09_09_289074 45 2 We -PRON- PRP 10_1101-2020_09_09_289074 45 3 set set VBD 10_1101-2020_09_09_289074 45 4 out out RP 10_1101-2020_09_09_289074 45 5 to to TO 10_1101-2020_09_09_289074 45 6 analyze analyze VB 10_1101-2020_09_09_289074 45 7 the the DT 10_1101-2020_09_09_289074 45 8 key key JJ 10_1101-2020_09_09_289074 45 9 AAs aa NNS 10_1101-2020_09_09_289074 45 10 involved involve VBN 10_1101-2020_09_09_289074 45 11 in in IN 10_1101-2020_09_09_289074 45 12 the the DT 10_1101-2020_09_09_289074 45 13 Spike Spike NNP 10_1101-2020_09_09_289074 45 14 / / SYM 10_1101-2020_09_09_289074 45 15 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 45 16 interaction interaction NN 10_1101-2020_09_09_289074 45 17 , , , 10_1101-2020_09_09_289074 45 18 in in IN 10_1101-2020_09_09_289074 45 19 order order NN 10_1101-2020_09_09_289074 45 20 to to TO 10_1101-2020_09_09_289074 45 21 highlight highlight VB 10_1101-2020_09_09_289074 45 22 which which WDT 10_1101-2020_09_09_289074 45 23 ones one NNS 10_1101-2020_09_09_289074 45 24 may may MD 10_1101-2020_09_09_289074 45 25 alter alter VB 10_1101-2020_09_09_289074 45 26 the the DT 10_1101-2020_09_09_289074 45 27 binding bind VBG 10_1101-2020_09_09_289074 45 28 affinity affinity NN 10_1101-2020_09_09_289074 45 29 and and CC 10_1101-2020_09_09_289074 45 30 therefore therefore RB 10_1101-2020_09_09_289074 45 31 etiological etiological JJ 10_1101-2020_09_09_289074 45 32 and and CC 10_1101-2020_09_09_289074 45 33 clinical clinical JJ 10_1101-2020_09_09_289074 45 34 properties property NNS 10_1101-2020_09_09_289074 45 35 of of IN 10_1101-2020_09_09_289074 45 36 different different JJ 10_1101-2020_09_09_289074 45 37 SARS- SARS- NNP 10_1101-2020_09_09_289074 45 38 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 45 39 variants variant NNS 10_1101-2020_09_09_289074 45 40 on on IN 10_1101-2020_09_09_289074 45 41 different different JJ 10_1101-2020_09_09_289074 45 42 patients patient NNS 10_1101-2020_09_09_289074 45 43 . . . 10_1101-2020_09_09_289074 46 1 Following follow VBG 10_1101-2020_09_09_289074 46 2 that that DT 10_1101-2020_09_09_289074 46 3 , , , 10_1101-2020_09_09_289074 46 4 we -PRON- PRP 10_1101-2020_09_09_289074 46 5 determined determine VBD 10_1101-2020_09_09_289074 46 6 which which WDT 10_1101-2020_09_09_289074 46 7 Spike Spike NNP 10_1101-2020_09_09_289074 46 8 and and CC 10_1101-2020_09_09_289074 46 9 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 46 10 AA AA NNP 10_1101-2020_09_09_289074 46 11 variations variation NNS 10_1101-2020_09_09_289074 46 12 relevant relevant JJ 10_1101-2020_09_09_289074 46 13 for for IN 10_1101-2020_09_09_289074 46 14 this this DT 10_1101-2020_09_09_289074 46 15 interaction interaction NN 10_1101-2020_09_09_289074 46 16 have have VBP 10_1101-2020_09_09_289074 46 17 been be VBN 10_1101-2020_09_09_289074 46 18 observed observe VBN 10_1101-2020_09_09_289074 46 19 in in IN 10_1101-2020_09_09_289074 46 20 the the DT 10_1101-2020_09_09_289074 46 21 SARS SARS NNP 10_1101-2020_09_09_289074 46 22 - - HYPH 10_1101-2020_09_09_289074 46 23 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 46 24 and and CC 10_1101-2020_09_09_289074 46 25 human human JJ 10_1101-2020_09_09_289074 46 26 population population NN 10_1101-2020_09_09_289074 46 27 , , , 10_1101-2020_09_09_289074 46 28 respectively respectively RB 10_1101-2020_09_09_289074 46 29 . . . 10_1101-2020_09_09_289074 47 1 Structural structural JJ 10_1101-2020_09_09_289074 47 2 analysis analysis NN 10_1101-2020_09_09_289074 47 3 of of IN 10_1101-2020_09_09_289074 47 4 Spike Spike NNP 10_1101-2020_09_09_289074 47 5 / / SYM 10_1101-2020_09_09_289074 47 6 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 47 7 interaction interaction NN 10_1101-2020_09_09_289074 47 8 We -PRON- PRP 10_1101-2020_09_09_289074 47 9 obtained obtain VBD 10_1101-2020_09_09_289074 47 10 structural structural JJ 10_1101-2020_09_09_289074 47 11 models model NNS 10_1101-2020_09_09_289074 47 12 of of IN 10_1101-2020_09_09_289074 47 13 the the DT 10_1101-2020_09_09_289074 47 14 SARS SARS NNP 10_1101-2020_09_09_289074 47 15 - - HYPH 10_1101-2020_09_09_289074 47 16 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 47 17 Spike Spike NNP 10_1101-2020_09_09_289074 47 18 interacting interact VBG 10_1101-2020_09_09_289074 47 19 with with IN 10_1101-2020_09_09_289074 47 20 the the DT 10_1101-2020_09_09_289074 47 21 human human JJ 10_1101-2020_09_09_289074 47 22 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 47 23 from from IN 10_1101-2020_09_09_289074 47 24 three three CD 10_1101-2020_09_09_289074 47 25 recent recent JJ 10_1101-2020_09_09_289074 47 26 X x NN 10_1101-2020_09_09_289074 47 27 - - NN 10_1101-2020_09_09_289074 47 28 ray ray NN 10_1101-2020_09_09_289074 47 29 structures structure NNS 10_1101-2020_09_09_289074 47 30 , , , 10_1101-2020_09_09_289074 47 31 deposited deposit VBN 10_1101-2020_09_09_289074 47 32 on on IN 10_1101-2020_09_09_289074 47 33 the the DT 10_1101-2020_09_09_289074 47 34 Protein Protein NNP 10_1101-2020_09_09_289074 47 35 Data Data NNPS 10_1101-2020_09_09_289074 47 36 Bank Bank NNP 10_1101-2020_09_09_289074 47 37 : : : 10_1101-2020_09_09_289074 47 38 6LZG 6LZG NNP 10_1101-2020_09_09_289074 47 39 ( ( -LRB- 10_1101-2020_09_09_289074 47 40 10 10 CD 10_1101-2020_09_09_289074 47 41 ) ) -RRB- 10_1101-2020_09_09_289074 47 42 , , , 10_1101-2020_09_09_289074 47 43 6M0J 6m0j CD 10_1101-2020_09_09_289074 47 44 ( ( -LRB- 10_1101-2020_09_09_289074 47 45 11 11 CD 10_1101-2020_09_09_289074 47 46 ) ) -RRB- 10_1101-2020_09_09_289074 47 47 and and CC 10_1101-2020_09_09_289074 47 48 6VW1 6VW1 NFP 10_1101-2020_09_09_289074 47 49 ( ( -LRB- 10_1101-2020_09_09_289074 47 50 12 12 CD 10_1101-2020_09_09_289074 47 51 ) ) -RRB- 10_1101-2020_09_09_289074 47 52 . . . 10_1101-2020_09_09_289074 48 1 For for IN 10_1101-2020_09_09_289074 48 2 6VW1 6vw1 CD 10_1101-2020_09_09_289074 48 3 , , , 10_1101-2020_09_09_289074 48 4 two two CD 10_1101-2020_09_09_289074 48 5 Spike Spike NNP 10_1101-2020_09_09_289074 48 6 / / SYM 10_1101-2020_09_09_289074 48 7 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 48 8 complexes complex NNS 10_1101-2020_09_09_289074 48 9 were be VBD 10_1101-2020_09_09_289074 48 10 available available JJ 10_1101-2020_09_09_289074 48 11 , , , 10_1101-2020_09_09_289074 48 12 so so RB 10_1101-2020_09_09_289074 48 13 we -PRON- PRP 10_1101-2020_09_09_289074 48 14 report report VBP 10_1101-2020_09_09_289074 48 15 results result NNS 10_1101-2020_09_09_289074 48 16 for for IN 10_1101-2020_09_09_289074 48 17 both both DT 10_1101-2020_09_09_289074 48 18 as as IN 10_1101-2020_09_09_289074 48 19 6VW1-A 6vw1-a CD 10_1101-2020_09_09_289074 48 20 and and CC 10_1101-2020_09_09_289074 48 21 6WV1-B 6wv1-b NN 10_1101-2020_09_09_289074 48 22 , , , 10_1101-2020_09_09_289074 48 23 separately separately RB 10_1101-2020_09_09_289074 48 24 . . . 10_1101-2020_09_09_289074 49 1 All all DT 10_1101-2020_09_09_289074 49 2 models model NNS 10_1101-2020_09_09_289074 49 3 show show VBP 10_1101-2020_09_09_289074 49 4 the the DT 10_1101-2020_09_09_289074 49 5 core core JJ 10_1101-2020_09_09_289074 49 6 domains domain NNS 10_1101-2020_09_09_289074 49 7 of of IN 10_1101-2020_09_09_289074 49 8 interaction interaction NN 10_1101-2020_09_09_289074 49 9 , , , 10_1101-2020_09_09_289074 49 10 located locate VBN 10_1101-2020_09_09_289074 49 11 in in IN 10_1101-2020_09_09_289074 49 12 the the DT 10_1101-2020_09_09_289074 49 13 region region NN 10_1101-2020_09_09_289074 49 14 of of IN 10_1101-2020_09_09_289074 49 15 AA AA NNP 10_1101-2020_09_09_289074 49 16 330 330 CD 10_1101-2020_09_09_289074 49 17 - - HYPH 10_1101-2020_09_09_289074 49 18 530 530 CD 10_1101-2020_09_09_289074 49 19 for for IN 10_1101-2020_09_09_289074 49 20 Spike Spike NNP 10_1101-2020_09_09_289074 49 21 and and CC 10_1101-2020_09_09_289074 49 22 in in IN 10_1101-2020_09_09_289074 49 23 the the DT 10_1101-2020_09_09_289074 49 24 region region NN 10_1101-2020_09_09_289074 49 25 AA AA NNP 10_1101-2020_09_09_289074 49 26 15 15 CD 10_1101-2020_09_09_289074 49 27 - - SYM 10_1101-2020_09_09_289074 49 28 615 615 CD 10_1101-2020_09_09_289074 49 29 of of IN 10_1101-2020_09_09_289074 49 30 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 49 31 . . . 10_1101-2020_09_09_289074 50 1 Full full JJ 10_1101-2020_09_09_289074 50 2 length length NN 10_1101-2020_09_09_289074 50 3 proteins protein NNS 10_1101-2020_09_09_289074 50 4 would would MD 10_1101-2020_09_09_289074 50 5 be be VB 10_1101-2020_09_09_289074 50 6 1273 1273 CD 10_1101-2020_09_09_289074 50 7 AAs aa NNS 10_1101-2020_09_09_289074 50 8 ( ( -LRB- 10_1101-2020_09_09_289074 50 9 Spike Spike NNP 10_1101-2020_09_09_289074 50 10 only only RB 10_1101-2020_09_09_289074 50 11 known know VBN 10_1101-2020_09_09_289074 50 12 isoform isoform NN 10_1101-2020_09_09_289074 50 13 , , , 10_1101-2020_09_09_289074 50 14 from from IN 10_1101-2020_09_09_289074 50 15 reference reference NN 10_1101-2020_09_09_289074 50 16 SARS SARS NNP 10_1101-2020_09_09_289074 50 17 - - HYPH 10_1101-2020_09_09_289074 50 18 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 50 19 genome genome NNP 10_1101-2020_09_09_289074 50 20 NC_045512.2 NC_045512.2 NNP 10_1101-2020_09_09_289074 50 21 ) ) -RRB- 10_1101-2020_09_09_289074 50 22 and and CC 10_1101-2020_09_09_289074 50 23 805 805 CD 10_1101-2020_09_09_289074 50 24 AAs aa NNS 10_1101-2020_09_09_289074 50 25 ( ( -LRB- 10_1101-2020_09_09_289074 50 26 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 50 27 isoform isoform NN 10_1101-2020_09_09_289074 50 28 1 1 CD 10_1101-2020_09_09_289074 50 29 , , , 10_1101-2020_09_09_289074 50 30 UniProt UniProt NNP 10_1101-2020_09_09_289074 50 31 i -PRON- PRP 10_1101-2020_09_09_289074 50 32 d d NN 10_1101-2020_09_09_289074 50 33 Q9BYF1 Q9BYF1 NNP 10_1101-2020_09_09_289074 50 34 - - HYPH 10_1101-2020_09_09_289074 50 35 1 1 CD 10_1101-2020_09_09_289074 50 36 ) ) -RRB- 10_1101-2020_09_09_289074 50 37 . . . 10_1101-2020_09_09_289074 51 1 Selected select VBN 10_1101-2020_09_09_289074 51 2 PDB PDB NNP 10_1101-2020_09_09_289074 51 3 entries entry NNS 10_1101-2020_09_09_289074 51 4 are be VBP 10_1101-2020_09_09_289074 51 5 wild wild JJ 10_1101-2020_09_09_289074 51 6 type type NN 10_1101-2020_09_09_289074 51 7 and and CC 10_1101-2020_09_09_289074 51 8 their -PRON- PRP$ 10_1101-2020_09_09_289074 51 9 primary primary JJ 10_1101-2020_09_09_289074 51 10 sequence sequence NN 10_1101-2020_09_09_289074 51 11 and and CC 10_1101-2020_09_09_289074 51 12 the the DT 10_1101-2020_09_09_289074 51 13 higher high JJR 10_1101-2020_09_09_289074 51 14 order order NN 10_1101-2020_09_09_289074 51 15 structures structure NNS 10_1101-2020_09_09_289074 51 16 were be VBD 10_1101-2020_09_09_289074 51 17 identical identical JJ 10_1101-2020_09_09_289074 51 18 . . . 10_1101-2020_09_09_289074 52 1 Residues Residues NNP 10_1101-2020_09_09_289074 52 2 517 517 CD 10_1101-2020_09_09_289074 52 3 - - HYPH 10_1101-2020_09_09_289074 52 4 519 519 CD 10_1101-2020_09_09_289074 52 5 were be VBD 10_1101-2020_09_09_289074 52 6 missed miss VBN 10_1101-2020_09_09_289074 52 7 in in IN 10_1101-2020_09_09_289074 52 8 6VW1-B. 6vw1-b. NN 10_1101-2020_09_09_289074 53 1 With with IN 10_1101-2020_09_09_289074 53 2 the the DT 10_1101-2020_09_09_289074 53 3 aim aim NN 10_1101-2020_09_09_289074 53 4 to to TO 10_1101-2020_09_09_289074 53 5 investigate investigate VB 10_1101-2020_09_09_289074 53 6 the the DT 10_1101-2020_09_09_289074 53 7 conformation conformation NN 10_1101-2020_09_09_289074 53 8 variability variability NN 10_1101-2020_09_09_289074 53 9 , , , 10_1101-2020_09_09_289074 53 10 PDB PDB NNP 10_1101-2020_09_09_289074 53 11 complexes complex NNS 10_1101-2020_09_09_289074 53 12 were be VBD 10_1101-2020_09_09_289074 53 13 aligned align VBN 10_1101-2020_09_09_289074 53 14 by by IN 10_1101-2020_09_09_289074 53 15 backbone backbone NN 10_1101-2020_09_09_289074 53 16 and and CC 10_1101-2020_09_09_289074 53 17 the the DT 10_1101-2020_09_09_289074 53 18 Root Root NNP 10_1101-2020_09_09_289074 53 19 Mean Mean NNP 10_1101-2020_09_09_289074 53 20 Square Square NNP 10_1101-2020_09_09_289074 53 21 deviation deviation NN 10_1101-2020_09_09_289074 53 22 ( ( -LRB- 10_1101-2020_09_09_289074 53 23 RMSd RMSd NNP 10_1101-2020_09_09_289074 53 24 ) ) -RRB- 10_1101-2020_09_09_289074 53 25 was be VBD 10_1101-2020_09_09_289074 53 26 computed compute VBN 10_1101-2020_09_09_289074 53 27 on on IN 10_1101-2020_09_09_289074 53 28 all all DT 10_1101-2020_09_09_289074 53 29 equivalent equivalent JJ 10_1101-2020_09_09_289074 53 30 not not RB 10_1101-2020_09_09_289074 53 31 hydrogen hydrogen NN 10_1101-2020_09_09_289074 53 32 atoms atom NNS 10_1101-2020_09_09_289074 53 33 . . . 10_1101-2020_09_09_289074 54 1 RMSd RMSd NNP 10_1101-2020_09_09_289074 54 2 data datum NNS 10_1101-2020_09_09_289074 54 3 have have VBP 10_1101-2020_09_09_289074 54 4 shown show VBN 10_1101-2020_09_09_289074 54 5 some some DT 10_1101-2020_09_09_289074 54 6 conformation conformation NN 10_1101-2020_09_09_289074 54 7 flexibility flexibility NN 10_1101-2020_09_09_289074 54 8 that that WDT 10_1101-2020_09_09_289074 54 9 confirmed confirm VBD 10_1101-2020_09_09_289074 54 10 our -PRON- PRP$ 10_1101-2020_09_09_289074 54 11 idea idea NN 10_1101-2020_09_09_289074 54 12 to to TO 10_1101-2020_09_09_289074 54 13 take take VB 10_1101-2020_09_09_289074 54 14 into into IN 10_1101-2020_09_09_289074 54 15 account account NN 10_1101-2020_09_09_289074 54 16 all all DT 10_1101-2020_09_09_289074 54 17 PDB PDB NNP 10_1101-2020_09_09_289074 54 18 structures structure NNS 10_1101-2020_09_09_289074 54 19 in in IN 10_1101-2020_09_09_289074 54 20 the the DT 10_1101-2020_09_09_289074 54 21 next next JJ 10_1101-2020_09_09_289074 54 22 investigation investigation NN 10_1101-2020_09_09_289074 54 23 ( ( -LRB- 10_1101-2020_09_09_289074 54 24 Fig fig NN 10_1101-2020_09_09_289074 54 25 1 1 CD 10_1101-2020_09_09_289074 54 26 ) ) -RRB- 10_1101-2020_09_09_289074 54 27 . . . 10_1101-2020_09_09_289074 55 1 The the DT 10_1101-2020_09_09_289074 55 2 GBPM GBPM NNP 10_1101-2020_09_09_289074 55 3 method method NN 10_1101-2020_09_09_289074 55 4 was be VBD 10_1101-2020_09_09_289074 55 5 originally originally RB 10_1101-2020_09_09_289074 55 6 developed develop VBN 10_1101-2020_09_09_289074 55 7 for for IN 10_1101-2020_09_09_289074 55 8 identifying identify VBG 10_1101-2020_09_09_289074 55 9 and and CC 10_1101-2020_09_09_289074 55 10 scoring score VBG 10_1101-2020_09_09_289074 55 11 pharmacophore pharmacophore NN 10_1101-2020_09_09_289074 55 12 and and CC 10_1101-2020_09_09_289074 55 13 protein- protein- VBG 10_1101-2020_09_09_289074 55 14 protein protein NN 10_1101-2020_09_09_289074 55 15 interaction interaction NN 10_1101-2020_09_09_289074 55 16 key key JJ 10_1101-2020_09_09_289074 55 17 features feature NNS 10_1101-2020_09_09_289074 55 18 by by IN 10_1101-2020_09_09_289074 55 19 combining combine VBG 10_1101-2020_09_09_289074 55 20 GRID GRID NNP 10_1101-2020_09_09_289074 55 21 molecular molecular JJ 10_1101-2020_09_09_289074 55 22 interaction interaction NN 10_1101-2020_09_09_289074 55 23 fields field NNS 10_1101-2020_09_09_289074 55 24 ( ( -LRB- 10_1101-2020_09_09_289074 55 25 MIFs MIFs NNP 10_1101-2020_09_09_289074 55 26 ) ) -RRB- 10_1101-2020_09_09_289074 55 27 according accord VBG 10_1101-2020_09_09_289074 55 28 to to IN 10_1101-2020_09_09_289074 55 29 the the DT 10_1101-2020_09_09_289074 55 30 GRAB GRAB NNP 10_1101-2020_09_09_289074 55 31 tool tool NN 10_1101-2020_09_09_289074 55 32 algorithm algorithm NNP 10_1101-2020_09_09_289074 55 33 ( ( -LRB- 10_1101-2020_09_09_289074 55 34 28 28 CD 10_1101-2020_09_09_289074 55 35 ) ) -RRB- 10_1101-2020_09_09_289074 55 36 . . . 10_1101-2020_09_09_289074 56 1 In in IN 10_1101-2020_09_09_289074 56 2 the the DT 10_1101-2020_09_09_289074 56 3 present present JJ 10_1101-2020_09_09_289074 56 4 study study NN 10_1101-2020_09_09_289074 56 5 , , , 10_1101-2020_09_09_289074 56 6 GBPM GBPM NNP 10_1101-2020_09_09_289074 56 7 has have VBZ 10_1101-2020_09_09_289074 56 8 been be VBN 10_1101-2020_09_09_289074 56 9 applied apply VBN 10_1101-2020_09_09_289074 56 10 to to IN 10_1101-2020_09_09_289074 56 11 all all DT 10_1101-2020_09_09_289074 56 12 selected select VBN 10_1101-2020_09_09_289074 56 13 complex complex JJ 10_1101-2020_09_09_289074 56 14 models model NNS 10_1101-2020_09_09_289074 56 15 considering consider VBG 10_1101-2020_09_09_289074 56 16 Spike Spike NNP 10_1101-2020_09_09_289074 56 17 and and CC 10_1101-2020_09_09_289074 56 18 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 56 19 either either RB 10_1101-2020_09_09_289074 56 20 as as IN 10_1101-2020_09_09_289074 56 21 host host NN 10_1101-2020_09_09_289074 56 22 or or CC 10_1101-2020_09_09_289074 56 23 guest guest NN 10_1101-2020_09_09_289074 56 24 . . . 10_1101-2020_09_09_289074 57 1 DRY DRY NNP 10_1101-2020_09_09_289074 57 2 , , , 10_1101-2020_09_09_289074 57 3 N1 n1 NN 10_1101-2020_09_09_289074 57 4 and and CC 10_1101-2020_09_09_289074 57 5 O o UH 10_1101-2020_09_09_289074 57 6 GRID GRID NNP 10_1101-2020_09_09_289074 57 7 probes probe NNS 10_1101-2020_09_09_289074 57 8 were be VBD 10_1101-2020_09_09_289074 57 9 considered consider VBN 10_1101-2020_09_09_289074 57 10 for for IN 10_1101-2020_09_09_289074 57 11 describing describe VBG 10_1101-2020_09_09_289074 57 12 hydrophobic hydrophobic NN 10_1101-2020_09_09_289074 57 13 , , , 10_1101-2020_09_09_289074 57 14 hydrogen hydrogen NN 10_1101-2020_09_09_289074 57 15 bond bond NN 10_1101-2020_09_09_289074 57 16 donor donor NN 10_1101-2020_09_09_289074 57 17 and and CC 10_1101-2020_09_09_289074 57 18 hydrogen hydrogen NNP 10_1101-2020_09_09_289074 57 19 bond bond NNP 10_1101-2020_09_09_289074 57 20 acceptor acceptor NN 10_1101-2020_09_09_289074 57 21 interaction interaction NNP 10_1101-2020_09_09_289074 57 22 . . . 10_1101-2020_09_09_289074 58 1 For for IN 10_1101-2020_09_09_289074 58 2 each each DT 10_1101-2020_09_09_289074 58 3 probe probe NN 10_1101-2020_09_09_289074 58 4 a a DT 10_1101-2020_09_09_289074 58 5 cut cut NN 10_1101-2020_09_09_289074 58 6 - - HYPH 10_1101-2020_09_09_289074 58 7 off off RP 10_1101-2020_09_09_289074 58 8 , , , 10_1101-2020_09_09_289074 58 9 required require VBN 10_1101-2020_09_09_289074 58 10 for for IN 10_1101-2020_09_09_289074 58 11 highlighting highlight VBG 10_1101-2020_09_09_289074 58 12 the the DT 10_1101-2020_09_09_289074 58 13 most most RBS 10_1101-2020_09_09_289074 58 14 relevant relevant JJ 10_1101-2020_09_09_289074 58 15 MIFs MIFs NNP 10_1101-2020_09_09_289074 58 16 points point NNS 10_1101-2020_09_09_289074 58 17 , , , 10_1101-2020_09_09_289074 58 18 was be VBD 10_1101-2020_09_09_289074 58 19 fixed fix VBN 10_1101-2020_09_09_289074 58 20 above above IN 10_1101-2020_09_09_289074 58 21 the the DT 10_1101-2020_09_09_289074 58 22 30 30 CD 10_1101-2020_09_09_289074 58 23 % % NN 10_1101-2020_09_09_289074 58 24 from from IN 10_1101-2020_09_09_289074 58 25 the the DT 10_1101-2020_09_09_289074 58 26 corresponding correspond VBG 10_1101-2020_09_09_289074 58 27 global global JJ 10_1101-2020_09_09_289074 58 28 minimum minimum JJ 10_1101-2020_09_09_289074 58 29 interaction interaction NN 10_1101-2020_09_09_289074 58 30 energy energy NN 10_1101-2020_09_09_289074 58 31 value value NN 10_1101-2020_09_09_289074 58 32 . . . 10_1101-2020_09_09_289074 59 1 With with IN 10_1101-2020_09_09_289074 59 2 respect respect NN 10_1101-2020_09_09_289074 59 3 to to IN 10_1101-2020_09_09_289074 59 4 the the DT 10_1101-2020_09_09_289074 59 5 known know VBN 10_1101-2020_09_09_289074 59 6 GBPM GBPM NNP 10_1101-2020_09_09_289074 59 7 application application NN 10_1101-2020_09_09_289074 59 8 , , , 10_1101-2020_09_09_289074 59 9 where where WRB 10_1101-2020_09_09_289074 59 10 pharmacophore pharmacophore NN 10_1101-2020_09_09_289074 59 11 features feature NNS 10_1101-2020_09_09_289074 59 12 are be VBP 10_1101-2020_09_09_289074 59 13 used use VBN 10_1101-2020_09_09_289074 59 14 for for IN 10_1101-2020_09_09_289074 59 15 virtual virtual JJ 10_1101-2020_09_09_289074 59 16 screening screening NN 10_1101-2020_09_09_289074 59 17 .CC .CC NFP 10_1101-2020_09_09_289074 59 18 - - : 10_1101-2020_09_09_289074 59 19 BY by IN 10_1101-2020_09_09_289074 59 20 - - HYPH 10_1101-2020_09_09_289074 59 21 NC NC NNP 10_1101-2020_09_09_289074 59 22 - - HYPH 10_1101-2020_09_09_289074 59 23 ND ND NNP 10_1101-2020_09_09_289074 59 24 4.0 4.0 CD 10_1101-2020_09_09_289074 59 25 International International NNP 10_1101-2020_09_09_289074 59 26 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 59 27 under under IN 10_1101-2020_09_09_289074 59 28 a a DT 10_1101-2020_09_09_289074 59 29 ( ( -LRB- 10_1101-2020_09_09_289074 59 30 which which WDT 10_1101-2020_09_09_289074 59 31 was be VBD 10_1101-2020_09_09_289074 59 32 not not RB 10_1101-2020_09_09_289074 59 33 certified certify VBN 10_1101-2020_09_09_289074 59 34 by by IN 10_1101-2020_09_09_289074 59 35 peer peer NN 10_1101-2020_09_09_289074 59 36 review review NN 10_1101-2020_09_09_289074 59 37 ) ) -RRB- 10_1101-2020_09_09_289074 59 38 is be VBZ 10_1101-2020_09_09_289074 59 39 the the DT 10_1101-2020_09_09_289074 59 40 author author NN 10_1101-2020_09_09_289074 59 41 / / SYM 10_1101-2020_09_09_289074 59 42 funder funder NN 10_1101-2020_09_09_289074 59 43 , , , 10_1101-2020_09_09_289074 59 44 who who WP 10_1101-2020_09_09_289074 59 45 has have VBZ 10_1101-2020_09_09_289074 59 46 granted grant VBN 10_1101-2020_09_09_289074 59 47 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 59 48 a a DT 10_1101-2020_09_09_289074 59 49 license license NN 10_1101-2020_09_09_289074 59 50 to to TO 10_1101-2020_09_09_289074 59 51 display display VB 10_1101-2020_09_09_289074 59 52 the the DT 10_1101-2020_09_09_289074 59 53 preprint preprint NN 10_1101-2020_09_09_289074 59 54 in in IN 10_1101-2020_09_09_289074 59 55 perpetuity perpetuity NN 10_1101-2020_09_09_289074 59 56 . . . 10_1101-2020_09_09_289074 60 1 It -PRON- PRP 10_1101-2020_09_09_289074 60 2 is be VBZ 10_1101-2020_09_09_289074 60 3 made make VBN 10_1101-2020_09_09_289074 60 4 The the DT 10_1101-2020_09_09_289074 60 5 copyright copyright NN 10_1101-2020_09_09_289074 60 6 holder holder NN 10_1101-2020_09_09_289074 60 7 for for IN 10_1101-2020_09_09_289074 60 8 this this DT 10_1101-2020_09_09_289074 60 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 60 10 version version NN 10_1101-2020_09_09_289074 60 11 posted post VBD 10_1101-2020_09_09_289074 60 12 January January NNP 10_1101-2020_09_09_289074 60 13 5 5 CD 10_1101-2020_09_09_289074 60 14 , , , 10_1101-2020_09_09_289074 60 15 2021 2021 CD 10_1101-2020_09_09_289074 60 16 . . . 10_1101-2020_09_09_289074 60 17 ; ; : 10_1101-2020_09_09_289074 60 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 60 19 : : : 10_1101-2020_09_09_289074 60 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 60 21 preprint preprint NN 10_1101-2020_09_09_289074 60 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 ADD 10_1101-2020_09_09_289074 60 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NN 10_1101-2020_09_09_289074 60 24 5 5 CD 10_1101-2020_09_09_289074 60 25 purposes purpose NNS 10_1101-2020_09_09_289074 60 26 , , , 10_1101-2020_09_09_289074 60 27 here here RB 10_1101-2020_09_09_289074 60 28 these these DT 10_1101-2020_09_09_289074 60 29 data datum NNS 10_1101-2020_09_09_289074 60 30 guided guide VBD 10_1101-2020_09_09_289074 60 31 us -PRON- PRP 10_1101-2020_09_09_289074 60 32 in in IN 10_1101-2020_09_09_289074 60 33 the the DT 10_1101-2020_09_09_289074 60 34 complex complex JJ 10_1101-2020_09_09_289074 60 35 stabilizing stabilize VBG 10_1101-2020_09_09_289074 60 36 AAs AAs NNP 10_1101-2020_09_09_289074 60 37 identification identification NN 10_1101-2020_09_09_289074 60 38 . . . 10_1101-2020_09_09_289074 61 1 In in IN 10_1101-2020_09_09_289074 61 2 fact fact NN 10_1101-2020_09_09_289074 61 3 , , , 10_1101-2020_09_09_289074 61 4 Spike Spike NNP 10_1101-2020_09_09_289074 61 5 or or CC 10_1101-2020_09_09_289074 61 6 ACE-2 ACE-2 NNP 10_1101-2020_09_09_289074 61 7 residues residue NNS 10_1101-2020_09_09_289074 61 8 , , , 10_1101-2020_09_09_289074 61 9 within within IN 10_1101-2020_09_09_289074 61 10 3 3 CD 10_1101-2020_09_09_289074 61 11 Å Å NNP 10_1101-2020_09_09_289074 61 12 from from IN 10_1101-2020_09_09_289074 61 13 GBPM GBPM NNP 10_1101-2020_09_09_289074 61 14 points point NNS 10_1101-2020_09_09_289074 61 15 , , , 10_1101-2020_09_09_289074 61 16 were be VBD 10_1101-2020_09_09_289074 61 17 marked mark VBN 10_1101-2020_09_09_289074 61 18 as as IN 10_1101-2020_09_09_289074 61 19 relevant relevant JJ 10_1101-2020_09_09_289074 61 20 in in IN 10_1101-2020_09_09_289074 61 21 the the DT 10_1101-2020_09_09_289074 61 22 host host NN 10_1101-2020_09_09_289074 61 23 - - HYPH 10_1101-2020_09_09_289074 61 24 guest guest JJ 10_1101-2020_09_09_289074 61 25 recognition recognition NN 10_1101-2020_09_09_289074 61 26 and and CC 10_1101-2020_09_09_289074 61 27 were be VBD 10_1101-2020_09_09_289074 61 28 qualitatively qualitatively RB 10_1101-2020_09_09_289074 61 29 scored score VBN 10_1101-2020_09_09_289074 61 30 by by IN 10_1101-2020_09_09_289074 61 31 assigning assign VBG 10_1101-2020_09_09_289074 61 32 them -PRON- PRP 10_1101-2020_09_09_289074 61 33 the the DT 10_1101-2020_09_09_289074 61 34 corresponding correspond VBG 10_1101-2020_09_09_289074 61 35 GBPM GBPM NNP 10_1101-2020_09_09_289074 61 36 energy energy NN 10_1101-2020_09_09_289074 61 37 . . . 10_1101-2020_09_09_289074 62 1 If if IN 10_1101-2020_09_09_289074 62 2 a a DT 10_1101-2020_09_09_289074 62 3 certain certain JJ 10_1101-2020_09_09_289074 62 4 residue residue NN 10_1101-2020_09_09_289074 62 5 was be VBD 10_1101-2020_09_09_289074 62 6 suggested suggest VBN 10_1101-2020_09_09_289074 62 7 by by IN 10_1101-2020_09_09_289074 62 8 more more JJR 10_1101-2020_09_09_289074 62 9 than than IN 10_1101-2020_09_09_289074 62 10 one one CD 10_1101-2020_09_09_289074 62 11 GBPM GBPM NNP 10_1101-2020_09_09_289074 62 12 point point NN 10_1101-2020_09_09_289074 62 13 , , , 10_1101-2020_09_09_289074 62 14 its -PRON- PRP$ 10_1101-2020_09_09_289074 62 15 score score NN 10_1101-2020_09_09_289074 62 16 was be VBD 10_1101-2020_09_09_289074 62 17 computed compute VBN 10_1101-2020_09_09_289074 62 18 as as IN 10_1101-2020_09_09_289074 62 19 summa summa JJR 10_1101-2020_09_09_289074 62 20 of of IN 10_1101-2020_09_09_289074 62 21 the the DT 10_1101-2020_09_09_289074 62 22 related related JJ 10_1101-2020_09_09_289074 62 23 GBPM GBPM NNP 10_1101-2020_09_09_289074 62 24 points point NNS 10_1101-2020_09_09_289074 62 25 energy energy NN 10_1101-2020_09_09_289074 62 26 ( ( -LRB- 10_1101-2020_09_09_289074 62 27 Fig fig NN 10_1101-2020_09_09_289074 62 28 . . . 10_1101-2020_09_09_289074 63 1 2 2 LS 10_1101-2020_09_09_289074 63 2 ) ) -RRB- 10_1101-2020_09_09_289074 63 3 . . . 10_1101-2020_09_09_289074 64 1 Finally finally RB 10_1101-2020_09_09_289074 64 2 , , , 10_1101-2020_09_09_289074 64 3 for for IN 10_1101-2020_09_09_289074 64 4 each each DT 10_1101-2020_09_09_289074 64 5 selected select VBN 10_1101-2020_09_09_289074 64 6 residue residue NN 10_1101-2020_09_09_289074 64 7 , , , 10_1101-2020_09_09_289074 64 8 the the DT 10_1101-2020_09_09_289074 64 9 four four CD 10_1101-2020_09_09_289074 64 10 models model NNS 10_1101-2020_09_09_289074 64 11 averaged average VBN 10_1101-2020_09_09_289074 64 12 score score NN 10_1101-2020_09_09_289074 64 13 was be VBD 10_1101-2020_09_09_289074 64 14 considered consider VBN 10_1101-2020_09_09_289074 64 15 for for IN 10_1101-2020_09_09_289074 64 16 estimating estimate VBG 10_1101-2020_09_09_289074 64 17 the the DT 10_1101-2020_09_09_289074 64 18 role role NN 10_1101-2020_09_09_289074 64 19 in in IN 10_1101-2020_09_09_289074 64 20 complex complex JJ 10_1101-2020_09_09_289074 64 21 stabilization stabilization NN 10_1101-2020_09_09_289074 64 22 . . . 10_1101-2020_09_09_289074 65 1 Taking take VBG 10_1101-2020_09_09_289074 65 2 into into IN 10_1101-2020_09_09_289074 65 3 account account NN 10_1101-2020_09_09_289074 65 4 their -PRON- PRP$ 10_1101-2020_09_09_289074 65 5 average average JJ 10_1101-2020_09_09_289074 65 6 scores score NNS 10_1101-2020_09_09_289074 65 7 , , , 10_1101-2020_09_09_289074 65 8 Spike Spike NNP 10_1101-2020_09_09_289074 65 9 and and CC 10_1101-2020_09_09_289074 65 10 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 65 11 AAs aa NNS 10_1101-2020_09_09_289074 65 12 were be VBD 10_1101-2020_09_09_289074 65 13 divided divide VBN 10_1101-2020_09_09_289074 65 14 by by IN 10_1101-2020_09_09_289074 65 15 quartiles quartile NNS 10_1101-2020_09_09_289074 65 16 to to TO 10_1101-2020_09_09_289074 65 17 facilitate facilitate VB 10_1101-2020_09_09_289074 65 18 the the DT 10_1101-2020_09_09_289074 65 19 interpretation interpretation NN 10_1101-2020_09_09_289074 65 20 of of IN 10_1101-2020_09_09_289074 65 21 the the DT 10_1101-2020_09_09_289074 65 22 results result NNS 10_1101-2020_09_09_289074 65 23 : : : 10_1101-2020_09_09_289074 65 24 quartile quartile NNP 10_1101-2020_09_09_289074 65 25 1 1 CD 10_1101-2020_09_09_289074 65 26 ( ( -LRB- 10_1101-2020_09_09_289074 65 27 Q1 Q1 NNP 10_1101-2020_09_09_289074 65 28 ) ) -RRB- 10_1101-2020_09_09_289074 65 29 includes include VBZ 10_1101-2020_09_09_289074 65 30 the the DT 10_1101-2020_09_09_289074 65 31 strongest strong JJS 10_1101-2020_09_09_289074 65 32 complex complex JJ 10_1101-2020_09_09_289074 65 33 stabilization stabilization NN 10_1101-2020_09_09_289074 65 34 contributors contributor NNS 10_1101-2020_09_09_289074 65 35 ; ; : 10_1101-2020_09_09_289074 65 36 quartile quartile NNP 10_1101-2020_09_09_289074 65 37 2 2 CD 10_1101-2020_09_09_289074 65 38 ( ( -LRB- 10_1101-2020_09_09_289074 65 39 Q2 q2 NN 10_1101-2020_09_09_289074 65 40 ) ) -RRB- 10_1101-2020_09_09_289074 65 41 contains contain VBZ 10_1101-2020_09_09_289074 65 42 residues residue NNS 10_1101-2020_09_09_289074 65 43 less less RBR 10_1101-2020_09_09_289074 65 44 important important JJ 10_1101-2020_09_09_289074 65 45 than than IN 10_1101-2020_09_09_289074 65 46 those those DT 10_1101-2020_09_09_289074 65 47 reported report VBN 10_1101-2020_09_09_289074 65 48 in in IN 10_1101-2020_09_09_289074 65 49 Q1 Q1 NNP 10_1101-2020_09_09_289074 65 50 but but CC 10_1101-2020_09_09_289074 65 51 most most RBS 10_1101-2020_09_09_289074 65 52 relevant relevant JJ 10_1101-2020_09_09_289074 65 53 of of IN 10_1101-2020_09_09_289074 65 54 those those DT 10_1101-2020_09_09_289074 65 55 included include VBN 10_1101-2020_09_09_289074 65 56 in in IN 10_1101-2020_09_09_289074 65 57 quartile quartile NNP 10_1101-2020_09_09_289074 65 58 3 3 CD 10_1101-2020_09_09_289074 65 59 ( ( -LRB- 10_1101-2020_09_09_289074 65 60 Q3 Q3 NNP 10_1101-2020_09_09_289074 65 61 ) ) -RRB- 10_1101-2020_09_09_289074 65 62 ; ; : 10_1101-2020_09_09_289074 65 63 quartile quartile NNP 10_1101-2020_09_09_289074 65 64 4 4 CD 10_1101-2020_09_09_289074 65 65 ( ( -LRB- 10_1101-2020_09_09_289074 65 66 Q4 Q4 NNP 10_1101-2020_09_09_289074 65 67 ) ) -RRB- 10_1101-2020_09_09_289074 65 68 indicates indicate VBZ 10_1101-2020_09_09_289074 65 69 the the DT 10_1101-2020_09_09_289074 65 70 weakest weak JJS 10_1101-2020_09_09_289074 65 71 predicted predict VBN 10_1101-2020_09_09_289074 65 72 interacting interact VBG 10_1101-2020_09_09_289074 65 73 AAs AAs NNP 10_1101-2020_09_09_289074 65 74 . . . 10_1101-2020_09_09_289074 66 1 Such such PDT 10_1101-2020_09_09_289074 66 2 an an DT 10_1101-2020_09_09_289074 66 3 extension extension NN 10_1101-2020_09_09_289074 66 4 of of IN 10_1101-2020_09_09_289074 66 5 the the DT 10_1101-2020_09_09_289074 66 6 original original JJ 10_1101-2020_09_09_289074 66 7 approach approach NN 10_1101-2020_09_09_289074 66 8 allowed allow VBD 10_1101-2020_09_09_289074 66 9 us -PRON- PRP 10_1101-2020_09_09_289074 66 10 to to TO 10_1101-2020_09_09_289074 66 11 highlight highlight VB 10_1101-2020_09_09_289074 66 12 known know VBN 10_1101-2020_09_09_289074 66 13 relevant relevant JJ 10_1101-2020_09_09_289074 66 14 interaction interaction NN 10_1101-2020_09_09_289074 66 15 residues residue NNS 10_1101-2020_09_09_289074 66 16 of of IN 10_1101-2020_09_09_289074 66 17 both both DT 10_1101-2020_09_09_289074 66 18 Spike Spike NNP 10_1101-2020_09_09_289074 66 19 ( ( -LRB- 10_1101-2020_09_09_289074 66 20 Table table NN 10_1101-2020_09_09_289074 66 21 1 1 CD 10_1101-2020_09_09_289074 66 22 ) ) -RRB- 10_1101-2020_09_09_289074 66 23 and and CC 10_1101-2020_09_09_289074 66 24 ACE-2 ACE-2 NNP 10_1101-2020_09_09_289074 66 25 ( ( -LRB- 10_1101-2020_09_09_289074 66 26 Table table NN 10_1101-2020_09_09_289074 66 27 2 2 CD 10_1101-2020_09_09_289074 66 28 ) ) -RRB- 10_1101-2020_09_09_289074 66 29 . . . 10_1101-2020_09_09_289074 67 1 Basically basically RB 10_1101-2020_09_09_289074 67 2 , , , 10_1101-2020_09_09_289074 67 3 the the DT 10_1101-2020_09_09_289074 67 4 same same JJ 10_1101-2020_09_09_289074 67 5 number number NN 10_1101-2020_09_09_289074 67 6 of of IN 10_1101-2020_09_09_289074 67 7 AAs AAs NNP 10_1101-2020_09_09_289074 67 8 was be VBD 10_1101-2020_09_09_289074 67 9 highlighted highlight VBN 10_1101-2020_09_09_289074 67 10 for for IN 10_1101-2020_09_09_289074 67 11 Spike Spike NNP 10_1101-2020_09_09_289074 67 12 ( ( -LRB- 10_1101-2020_09_09_289074 67 13 26 26 CD 10_1101-2020_09_09_289074 67 14 AAs aa NNS 10_1101-2020_09_09_289074 67 15 ) ) -RRB- 10_1101-2020_09_09_289074 67 16 and and CC 10_1101-2020_09_09_289074 67 17 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 67 18 ( ( -LRB- 10_1101-2020_09_09_289074 67 19 25 25 CD 10_1101-2020_09_09_289074 67 20 AAs aa NNS 10_1101-2020_09_09_289074 67 21 ) ) -RRB- 10_1101-2020_09_09_289074 67 22 . . . 10_1101-2020_09_09_289074 68 1 The the DT 10_1101-2020_09_09_289074 68 2 average average JJ 10_1101-2020_09_09_289074 68 3 score score NN 10_1101-2020_09_09_289074 68 4 was be VBD 10_1101-2020_09_09_289074 68 5 also also RB 10_1101-2020_09_09_289074 68 6 in in IN 10_1101-2020_09_09_289074 68 7 the the DT 10_1101-2020_09_09_289074 68 8 same same JJ 10_1101-2020_09_09_289074 68 9 range range NN 10_1101-2020_09_09_289074 68 10 . . . 10_1101-2020_09_09_289074 69 1 Spike Spike NNP 10_1101-2020_09_09_289074 69 2 reported report VBD 10_1101-2020_09_09_289074 69 3 a a DT 10_1101-2020_09_09_289074 69 4 population population NN 10_1101-2020_09_09_289074 69 5 of of IN 10_1101-2020_09_09_289074 69 6 Q1 Q1 NNP 10_1101-2020_09_09_289074 69 7 larger large JJR 10_1101-2020_09_09_289074 69 8 than than IN 10_1101-2020_09_09_289074 69 9 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 69 10 : : : 10_1101-2020_09_09_289074 69 11 12 12 CD 10_1101-2020_09_09_289074 69 12 and and CC 10_1101-2020_09_09_289074 69 13 7 7 CD 10_1101-2020_09_09_289074 69 14 AAs aa NNS 10_1101-2020_09_09_289074 69 15 , , , 10_1101-2020_09_09_289074 69 16 respectively respectively RB 10_1101-2020_09_09_289074 69 17 . . . 10_1101-2020_09_09_289074 70 1 The the DT 10_1101-2020_09_09_289074 70 2 opposite opposite JJ 10_1101-2020_09_09_289074 70 3 scenario scenario NN 10_1101-2020_09_09_289074 70 4 was be VBD 10_1101-2020_09_09_289074 70 5 observed observe VBN 10_1101-2020_09_09_289074 70 6 in in IN 10_1101-2020_09_09_289074 70 7 the the DT 10_1101-2020_09_09_289074 70 8 Q2 q2 NN 10_1101-2020_09_09_289074 70 9 that that WDT 10_1101-2020_09_09_289074 70 10 accounted account VBD 10_1101-2020_09_09_289074 70 11 for for IN 10_1101-2020_09_09_289074 70 12 7 7 CD 10_1101-2020_09_09_289074 70 13 residues residue NNS 10_1101-2020_09_09_289074 70 14 for for IN 10_1101-2020_09_09_289074 70 15 Spike Spike NNP 10_1101-2020_09_09_289074 70 16 and and CC 10_1101-2020_09_09_289074 70 17 11 11 CD 10_1101-2020_09_09_289074 70 18 for for IN 10_1101-2020_09_09_289074 70 19 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 70 20 . . . 10_1101-2020_09_09_289074 71 1 No no DT 10_1101-2020_09_09_289074 71 2 remarkable remarkable JJ 10_1101-2020_09_09_289074 71 3 difference difference NN 10_1101-2020_09_09_289074 71 4 can can MD 10_1101-2020_09_09_289074 71 5 be be VB 10_1101-2020_09_09_289074 71 6 addressed address VBN 10_1101-2020_09_09_289074 71 7 to to IN 10_1101-2020_09_09_289074 71 8 the the DT 10_1101-2020_09_09_289074 71 9 Q3 Q3 NNP 10_1101-2020_09_09_289074 71 10 and and CC 10_1101-2020_09_09_289074 71 11 Q4 Q4 NNP 10_1101-2020_09_09_289074 71 12 Spike Spike NNP 10_1101-2020_09_09_289074 71 13 - - HYPH 10_1101-2020_09_09_289074 71 14 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 71 15 comparison comparison NN 10_1101-2020_09_09_289074 71 16 . . . 10_1101-2020_09_09_289074 72 1 We -PRON- PRP 10_1101-2020_09_09_289074 72 2 reasoned reason VBD 10_1101-2020_09_09_289074 72 3 that that IN 10_1101-2020_09_09_289074 72 4 mutations mutation NNS 10_1101-2020_09_09_289074 72 5 and and CC 10_1101-2020_09_09_289074 72 6 variants variant NNS 10_1101-2020_09_09_289074 72 7 in in IN 10_1101-2020_09_09_289074 72 8 Q1 Q1 NNP 10_1101-2020_09_09_289074 72 9 residues residue NNS 10_1101-2020_09_09_289074 72 10 could could MD 10_1101-2020_09_09_289074 72 11 have have VB 10_1101-2020_09_09_289074 72 12 a a DT 10_1101-2020_09_09_289074 72 13 more more RBR 10_1101-2020_09_09_289074 72 14 relevant relevant JJ 10_1101-2020_09_09_289074 72 15 impact impact NN 10_1101-2020_09_09_289074 72 16 in in IN 10_1101-2020_09_09_289074 72 17 the the DT 10_1101-2020_09_09_289074 72 18 complex complex JJ 10_1101-2020_09_09_289074 72 19 stability stability NN 10_1101-2020_09_09_289074 72 20 . . . 10_1101-2020_09_09_289074 73 1 The the DT 10_1101-2020_09_09_289074 73 2 analysis analysis NN 10_1101-2020_09_09_289074 73 3 of of IN 10_1101-2020_09_09_289074 73 4 all all DT 10_1101-2020_09_09_289074 73 5 designed design VBN 10_1101-2020_09_09_289074 73 6 GBPM GBPM NNP 10_1101-2020_09_09_289074 73 7 suggested suggest VBD 10_1101-2020_09_09_289074 73 8 the the DT 10_1101-2020_09_09_289074 73 9 Spike Spike NNP 10_1101-2020_09_09_289074 73 10 - - HYPH 10_1101-2020_09_09_289074 73 11 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 73 12 molecular molecular JJ 10_1101-2020_09_09_289074 73 13 recognition recognition NN 10_1101-2020_09_09_289074 73 14 is be VBZ 10_1101-2020_09_09_289074 73 15 largely largely RB 10_1101-2020_09_09_289074 73 16 sustained sustain VBN 10_1101-2020_09_09_289074 73 17 by by IN 10_1101-2020_09_09_289074 73 18 polar polar JJ 10_1101-2020_09_09_289074 73 19 interactions interaction NNS 10_1101-2020_09_09_289074 73 20 , , , 10_1101-2020_09_09_289074 73 21 such such JJ 10_1101-2020_09_09_289074 73 22 as as IN 10_1101-2020_09_09_289074 73 23 hydrogen hydrogen NN 10_1101-2020_09_09_289074 73 24 bonds bond NNS 10_1101-2020_09_09_289074 73 25 , , , 10_1101-2020_09_09_289074 73 26 and and CC 10_1101-2020_09_09_289074 73 27 by by IN 10_1101-2020_09_09_289074 73 28 very very RB 10_1101-2020_09_09_289074 73 29 few few JJ 10_1101-2020_09_09_289074 73 30 putative putative JJ 10_1101-2020_09_09_289074 73 31 hydrophobic hydrophobic NN 10_1101-2020_09_09_289074 73 32 contributions contribution NNS 10_1101-2020_09_09_289074 73 33 ( ( -LRB- 10_1101-2020_09_09_289074 73 34 Table table NN 10_1101-2020_09_09_289074 73 35 3 3 CD 10_1101-2020_09_09_289074 73 36 ) ) -RRB- 10_1101-2020_09_09_289074 73 37 . . . 10_1101-2020_09_09_289074 74 1 Mutational mutational JJ 10_1101-2020_09_09_289074 74 2 analysis analysis NN 10_1101-2020_09_09_289074 74 3 of of IN 10_1101-2020_09_09_289074 74 4 SARS SARS NNP 10_1101-2020_09_09_289074 74 5 - - HYPH 10_1101-2020_09_09_289074 74 6 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 74 7 Spike Spike NNP 10_1101-2020_09_09_289074 74 8 We -PRON- PRP 10_1101-2020_09_09_289074 74 9 analyzed analyze VBD 10_1101-2020_09_09_289074 74 10 295,507 295,507 CD 10_1101-2020_09_09_289074 74 11 publicly publicly RB 10_1101-2020_09_09_289074 74 12 available available JJ 10_1101-2020_09_09_289074 74 13 SARS SARS NNP 10_1101-2020_09_09_289074 74 14 - - HYPH 10_1101-2020_09_09_289074 74 15 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 74 16 full full JJ 10_1101-2020_09_09_289074 74 17 - - HYPH 10_1101-2020_09_09_289074 74 18 length length NN 10_1101-2020_09_09_289074 74 19 genome genome JJ 10_1101-2020_09_09_289074 74 20 sequences sequence NNS 10_1101-2020_09_09_289074 74 21 collected collect VBN 10_1101-2020_09_09_289074 74 22 worldwide worldwide RB 10_1101-2020_09_09_289074 74 23 and and CC 10_1101-2020_09_09_289074 74 24 deposited deposit VBN 10_1101-2020_09_09_289074 74 25 on on IN 10_1101-2020_09_09_289074 74 26 the the DT 10_1101-2020_09_09_289074 74 27 GISAID GISAID NNP 10_1101-2020_09_09_289074 74 28 database database NN 10_1101-2020_09_09_289074 74 29 on on IN 10_1101-2020_09_09_289074 74 30 December December NNP 10_1101-2020_09_09_289074 74 31 30 30 CD 10_1101-2020_09_09_289074 74 32 , , , 10_1101-2020_09_09_289074 74 33 2020 2020 CD 10_1101-2020_09_09_289074 74 34 ( ( -LRB- 10_1101-2020_09_09_289074 74 35 29 29 CD 10_1101-2020_09_09_289074 74 36 ) ) -RRB- 10_1101-2020_09_09_289074 74 37 . . . 10_1101-2020_09_09_289074 75 1 From from IN 10_1101-2020_09_09_289074 75 2 these these DT 10_1101-2020_09_09_289074 75 3 , , , 10_1101-2020_09_09_289074 75 4 we -PRON- PRP 10_1101-2020_09_09_289074 75 5 obtained obtain VBD 10_1101-2020_09_09_289074 75 6 257,434 257,434 CD 10_1101-2020_09_09_289074 75 7 samples sample NNS 10_1101-2020_09_09_289074 75 8 containing contain VBG 10_1101-2020_09_09_289074 75 9 at at RB 10_1101-2020_09_09_289074 75 10 least least RBS 10_1101-2020_09_09_289074 75 11 one one CD 10_1101-2020_09_09_289074 75 12 AA aa NN 10_1101-2020_09_09_289074 75 13 - - HYPH 10_1101-2020_09_09_289074 75 14 changing change VBG 10_1101-2020_09_09_289074 75 15 mutation mutation NN 10_1101-2020_09_09_289074 75 16 in in IN 10_1101-2020_09_09_289074 75 17 the the DT 10_1101-2020_09_09_289074 75 18 Spike Spike NNP 10_1101-2020_09_09_289074 75 19 protein protein NN 10_1101-2020_09_09_289074 75 20 . . . 10_1101-2020_09_09_289074 76 1 A a DT 10_1101-2020_09_09_289074 76 2 total total NN 10_1101-2020_09_09_289074 76 3 of of IN 10_1101-2020_09_09_289074 76 4 3,314 3,314 CD 10_1101-2020_09_09_289074 76 5 different different JJ 10_1101-2020_09_09_289074 76 6 AA AA NNP 10_1101-2020_09_09_289074 76 7 - - HYPH 10_1101-2020_09_09_289074 76 8 changing change VBG 10_1101-2020_09_09_289074 76 9 mutations mutation NNS 10_1101-2020_09_09_289074 76 10 were be VBD 10_1101-2020_09_09_289074 76 11 detected detect VBN 10_1101-2020_09_09_289074 76 12 in in IN 10_1101-2020_09_09_289074 76 13 the the DT 10_1101-2020_09_09_289074 76 14 1,279 1,279 CD 10_1101-2020_09_09_289074 76 15 AA AA NNP 10_1101-2020_09_09_289074 76 16 - - HYPH 10_1101-2020_09_09_289074 76 17 long long JJ 10_1101-2020_09_09_289074 76 18 Spike Spike NNP 10_1101-2020_09_09_289074 76 19 sequence sequence NN 10_1101-2020_09_09_289074 76 20 . . . 10_1101-2020_09_09_289074 77 1 However however RB 10_1101-2020_09_09_289074 77 2 , , , 10_1101-2020_09_09_289074 77 3 many many JJ 10_1101-2020_09_09_289074 77 4 of of IN 10_1101-2020_09_09_289074 77 5 these these DT 10_1101-2020_09_09_289074 77 6 are be VBP 10_1101-2020_09_09_289074 77 7 unique unique JJ 10_1101-2020_09_09_289074 77 8 events event NNS 10_1101-2020_09_09_289074 77 9 ( ( -LRB- 10_1101-2020_09_09_289074 77 10 or or CC 10_1101-2020_09_09_289074 77 11 possibly possibly RB 10_1101-2020_09_09_289074 77 12 even even RB 10_1101-2020_09_09_289074 77 13 sequencing sequence VBG 10_1101-2020_09_09_289074 77 14 errors error NNS 10_1101-2020_09_09_289074 77 15 ) ) -RRB- 10_1101-2020_09_09_289074 77 16 , , , 10_1101-2020_09_09_289074 77 17 as as IN 10_1101-2020_09_09_289074 77 18 only only RB 10_1101-2020_09_09_289074 77 19 2,023 2,023 CD 10_1101-2020_09_09_289074 77 20 mutations mutation NNS 10_1101-2020_09_09_289074 77 21 were be VBD 10_1101-2020_09_09_289074 77 22 found find VBN 10_1101-2020_09_09_289074 77 23 in in IN 10_1101-2020_09_09_289074 77 24 more more JJR 10_1101-2020_09_09_289074 77 25 than than IN 10_1101-2020_09_09_289074 77 26 one one CD 10_1101-2020_09_09_289074 77 27 sample sample NN 10_1101-2020_09_09_289074 77 28 , , , 10_1101-2020_09_09_289074 77 29 788 788 CD 10_1101-2020_09_09_289074 77 30 were be VBD 10_1101-2020_09_09_289074 77 31 found find VBN 10_1101-2020_09_09_289074 77 32 in in IN 10_1101-2020_09_09_289074 77 33 more more JJR 10_1101-2020_09_09_289074 77 34 than than IN 10_1101-2020_09_09_289074 77 35 ten ten CD 10_1101-2020_09_09_289074 77 36 samples sample NNS 10_1101-2020_09_09_289074 77 37 , , , 10_1101-2020_09_09_289074 77 38 and and CC 10_1101-2020_09_09_289074 77 39 196 196 CD 10_1101-2020_09_09_289074 77 40 in in IN 10_1101-2020_09_09_289074 77 41 more more JJR 10_1101-2020_09_09_289074 77 42 than than IN 10_1101-2020_09_09_289074 77 43 one one CD 10_1101-2020_09_09_289074 77 44 hundred hundred CD 10_1101-2020_09_09_289074 77 45 samples sample NNS 10_1101-2020_09_09_289074 77 46 ( ( -LRB- 10_1101-2020_09_09_289074 77 47 Supplementary Supplementary NNP 10_1101-2020_09_09_289074 77 48 File File NNP 10_1101-2020_09_09_289074 77 49 1 1 CD 10_1101-2020_09_09_289074 77 50 ) ) -RRB- 10_1101-2020_09_09_289074 77 51 . . . 10_1101-2020_09_09_289074 78 1 We -PRON- PRP 10_1101-2020_09_09_289074 78 2 then then RB 10_1101-2020_09_09_289074 78 3 focused focus VBD 10_1101-2020_09_09_289074 78 4 on on IN 10_1101-2020_09_09_289074 78 5 mutations mutation NNS 10_1101-2020_09_09_289074 78 6 located locate VBN 10_1101-2020_09_09_289074 78 7 in in IN 10_1101-2020_09_09_289074 78 8 the the DT 10_1101-2020_09_09_289074 78 9 Spike Spike NNP 10_1101-2020_09_09_289074 78 10 RBD RBD NNP 10_1101-2020_09_09_289074 78 11 ( ( -LRB- 10_1101-2020_09_09_289074 78 12 aa aa NNP 10_1101-2020_09_09_289074 78 13 330 330 CD 10_1101-2020_09_09_289074 78 14 - - SYM 10_1101-2020_09_09_289074 78 15 530 530 CD 10_1101-2020_09_09_289074 78 16 ) ) -RRB- 10_1101-2020_09_09_289074 78 17 with with IN 10_1101-2020_09_09_289074 78 18 predicted predict VBN 10_1101-2020_09_09_289074 78 19 interaction interaction NN 10_1101-2020_09_09_289074 78 20 contribution contribution NN 10_1101-2020_09_09_289074 78 21 , , , 10_1101-2020_09_09_289074 78 22 as as IN 10_1101-2020_09_09_289074 78 23 assessed assess VBN 10_1101-2020_09_09_289074 78 24 by by IN 10_1101-2020_09_09_289074 78 25 our -PRON- PRP$ 10_1101-2020_09_09_289074 78 26 GBPM GBPM NNP 10_1101-2020_09_09_289074 78 27 method method NN 10_1101-2020_09_09_289074 78 28 . . . 10_1101-2020_09_09_289074 79 1 The the DT 10_1101-2020_09_09_289074 79 2 majority majority NN 10_1101-2020_09_09_289074 79 3 of of IN 10_1101-2020_09_09_289074 79 4 mutations mutation NNS 10_1101-2020_09_09_289074 79 5 here here RB 10_1101-2020_09_09_289074 79 6 are be VBP 10_1101-2020_09_09_289074 79 7 found find VBN 10_1101-2020_09_09_289074 79 8 in in IN 10_1101-2020_09_09_289074 79 9 only only RB 10_1101-2020_09_09_289074 79 10 a a DT 10_1101-2020_09_09_289074 79 11 handful handful NN 10_1101-2020_09_09_289074 79 12 of of IN 10_1101-2020_09_09_289074 79 13 samples sample NNS 10_1101-2020_09_09_289074 79 14 ( ( -LRB- 10_1101-2020_09_09_289074 79 15 Table table NN 10_1101-2020_09_09_289074 79 16 4 4 CD 10_1101-2020_09_09_289074 79 17 and and CC 10_1101-2020_09_09_289074 79 18 Fig fig NN 10_1101-2020_09_09_289074 79 19 4 4 CD 10_1101-2020_09_09_289074 79 20 A a NN 10_1101-2020_09_09_289074 79 21 ) ) -RRB- 10_1101-2020_09_09_289074 79 22 , , , 10_1101-2020_09_09_289074 79 23 with with IN 10_1101-2020_09_09_289074 79 24 a a DT 10_1101-2020_09_09_289074 79 25 few few JJ 10_1101-2020_09_09_289074 79 26 notable notable JJ 10_1101-2020_09_09_289074 79 27 exceptions exception NNS 10_1101-2020_09_09_289074 79 28 . . . 10_1101-2020_09_09_289074 80 1 The the DT 10_1101-2020_09_09_289074 80 2 mutations mutation NNS 10_1101-2020_09_09_289074 80 3 S477N S477N NNP 10_1101-2020_09_09_289074 80 4 and and CC 10_1101-2020_09_09_289074 80 5 N439 N439 NNP 10_1101-2020_09_09_289074 80 6 K K NNP 10_1101-2020_09_09_289074 80 7 are be VBP 10_1101-2020_09_09_289074 80 8 the the DT 10_1101-2020_09_09_289074 80 9 most most RBS 10_1101-2020_09_09_289074 80 10 frequent frequent JJ 10_1101-2020_09_09_289074 80 11 in in IN 10_1101-2020_09_09_289074 80 12 the the DT 10_1101-2020_09_09_289074 80 13 current current JJ 10_1101-2020_09_09_289074 80 14 population population NN 10_1101-2020_09_09_289074 80 15 and and CC 10_1101-2020_09_09_289074 80 16 were be VBD 10_1101-2020_09_09_289074 80 17 identified identify VBN 10_1101-2020_09_09_289074 80 18 in in IN 10_1101-2020_09_09_289074 80 19 16,547 16,547 CD 10_1101-2020_09_09_289074 80 20 patients patient NNS 10_1101-2020_09_09_289074 80 21 ( ( -LRB- 10_1101-2020_09_09_289074 80 22 5.60 5.60 CD 10_1101-2020_09_09_289074 80 23 % % NN 10_1101-2020_09_09_289074 80 24 ) ) -RRB- 10_1101-2020_09_09_289074 80 25 and and CC 10_1101-2020_09_09_289074 80 26 5,587 5,587 CD 10_1101-2020_09_09_289074 80 27 patients patient NNS 10_1101-2020_09_09_289074 80 28 ( ( -LRB- 10_1101-2020_09_09_289074 80 29 1.89 1.89 CD 10_1101-2020_09_09_289074 80 30 % % NN 10_1101-2020_09_09_289074 80 31 ) ) -RRB- 10_1101-2020_09_09_289074 80 32 respectively respectively RB 10_1101-2020_09_09_289074 80 33 . . . 10_1101-2020_09_09_289074 81 1 These these DT 10_1101-2020_09_09_289074 81 2 two two CD 10_1101-2020_09_09_289074 81 3 variants variant NNS 10_1101-2020_09_09_289074 81 4 ( ( -LRB- 10_1101-2020_09_09_289074 81 5 N439 N439 NNP 10_1101-2020_09_09_289074 81 6 K K NNP 10_1101-2020_09_09_289074 81 7 and and CC 10_1101-2020_09_09_289074 81 8 S477N S477N NNP 10_1101-2020_09_09_289074 81 9 ) ) -RRB- 10_1101-2020_09_09_289074 81 10 are be VBP 10_1101-2020_09_09_289074 81 11 also also RB 10_1101-2020_09_09_289074 81 12 amongst amongst IN 10_1101-2020_09_09_289074 81 13 the the DT 10_1101-2020_09_09_289074 81 14 top top JJ 10_1101-2020_09_09_289074 81 15 20 20 CD 10_1101-2020_09_09_289074 81 16 most most RBS 10_1101-2020_09_09_289074 81 17 frequent frequent JJ 10_1101-2020_09_09_289074 81 18 in in IN 10_1101-2020_09_09_289074 81 19 the the DT 10_1101-2020_09_09_289074 81 20 population population NN 10_1101-2020_09_09_289074 81 21 and and CC 10_1101-2020_09_09_289074 81 22 involve involve VBP 10_1101-2020_09_09_289074 81 23 two two CD 10_1101-2020_09_09_289074 81 24 positions position NNS 10_1101-2020_09_09_289074 81 25 productively productively RB 10_1101-2020_09_09_289074 81 26 contributing contribute VBG 10_1101-2020_09_09_289074 81 27 to to IN 10_1101-2020_09_09_289074 81 28 the the DT 10_1101-2020_09_09_289074 81 29 interaction interaction NN 10_1101-2020_09_09_289074 81 30 between between IN 10_1101-2020_09_09_289074 81 31 Spike Spike NNP 10_1101-2020_09_09_289074 81 32 and and CC 10_1101-2020_09_09_289074 81 33 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 81 34 , , , 10_1101-2020_09_09_289074 81 35 according accord VBG 10_1101-2020_09_09_289074 81 36 to to IN 10_1101-2020_09_09_289074 81 37 GBPM GBPM NNP 10_1101-2020_09_09_289074 81 38 ( ( -LRB- 10_1101-2020_09_09_289074 81 39 see see VB 10_1101-2020_09_09_289074 81 40 Table table NN 10_1101-2020_09_09_289074 81 41 1 1 CD 10_1101-2020_09_09_289074 81 42 and and CC 10_1101-2020_09_09_289074 81 43 Fig fig NN 10_1101-2020_09_09_289074 81 44 3 3 CD 10_1101-2020_09_09_289074 81 45 for for IN 10_1101-2020_09_09_289074 81 46 locations location NNS 10_1101-2020_09_09_289074 81 47 439 439 CD 10_1101-2020_09_09_289074 81 48 and and CC 10_1101-2020_09_09_289074 81 49 477 477 CD 10_1101-2020_09_09_289074 81 50 ) ) -RRB- 10_1101-2020_09_09_289074 81 51 . . . 10_1101-2020_09_09_289074 82 1 The the DT 10_1101-2020_09_09_289074 82 2 graphical graphical JJ 10_1101-2020_09_09_289074 82 3 inspection inspection NN 10_1101-2020_09_09_289074 82 4 of of IN 10_1101-2020_09_09_289074 82 5 the the DT 10_1101-2020_09_09_289074 82 6 PDB PDB NNP 10_1101-2020_09_09_289074 82 7 structures structure NNS 10_1101-2020_09_09_289074 82 8 revealed reveal VBD 10_1101-2020_09_09_289074 82 9 that that IN 10_1101-2020_09_09_289074 82 10 Spike Spike NNP 10_1101-2020_09_09_289074 82 11 Asparagine Asparagine NNP 10_1101-2020_09_09_289074 82 12 ( ( -LRB- 10_1101-2020_09_09_289074 82 13 N n NN 10_1101-2020_09_09_289074 82 14 ) ) -RRB- 10_1101-2020_09_09_289074 82 15 439 439 CD 10_1101-2020_09_09_289074 82 16 , , , 10_1101-2020_09_09_289074 82 17 raked rake VBN 10_1101-2020_09_09_289074 82 18 at at IN 10_1101-2020_09_09_289074 82 19 GBPM GBPM NNP 10_1101-2020_09_09_289074 82 20 Q2 Q2 NNP 10_1101-2020_09_09_289074 82 21 , , , 10_1101-2020_09_09_289074 82 22 is be VBZ 10_1101-2020_09_09_289074 82 23 mainly mainly RB 10_1101-2020_09_09_289074 82 24 involved involve VBN 10_1101-2020_09_09_289074 82 25 in in IN 10_1101-2020_09_09_289074 82 26 intra intra JJ 10_1101-2020_09_09_289074 82 27 - - JJ 10_1101-2020_09_09_289074 82 28 protein protein JJ 10_1101-2020_09_09_289074 82 29 interaction interaction NN 10_1101-2020_09_09_289074 82 30 . . . 10_1101-2020_09_09_289074 83 1 In in IN 10_1101-2020_09_09_289074 83 2 fact fact NN 10_1101-2020_09_09_289074 83 3 , , , 10_1101-2020_09_09_289074 83 4 by by IN 10_1101-2020_09_09_289074 83 5 means mean NNS 10_1101-2020_09_09_289074 83 6 of of IN 10_1101-2020_09_09_289074 83 7 its -PRON- PRP$ 10_1101-2020_09_09_289074 83 8 backbone backbone NN 10_1101-2020_09_09_289074 83 9 sp2 sp2 NNP 10_1101-2020_09_09_289074 83 10 oxygen oxygen NNP 10_1101-2020_09_09_289074 83 11 atom atom NNP 10_1101-2020_09_09_289074 83 12 , , , 10_1101-2020_09_09_289074 83 13 N439 N439 NNP 10_1101-2020_09_09_289074 83 14 accepts accept VBZ 10_1101-2020_09_09_289074 83 15 one one CD 10_1101-2020_09_09_289074 83 16 hydrogen hydrogen NN 10_1101-2020_09_09_289074 83 17 bond bond NN 10_1101-2020_09_09_289074 83 18 from from IN 10_1101-2020_09_09_289074 83 19 Spike Spike NNP 10_1101-2020_09_09_289074 83 20 Serine Serine NNP 10_1101-2020_09_09_289074 83 21 443 443 CD 10_1101-2020_09_09_289074 83 22 sidechain sidechain NN 10_1101-2020_09_09_289074 83 23 and and CC 10_1101-2020_09_09_289074 83 24 , , , 10_1101-2020_09_09_289074 83 25 by by IN 10_1101-2020_09_09_289074 83 26 its -PRON- PRP$ 10_1101-2020_09_09_289074 83 27 sidechain sidechain JJ 10_1101-2020_09_09_289074 83 28 amide amide NN 10_1101-2020_09_09_289074 83 29 .CC .CC NFP 10_1101-2020_09_09_289074 83 30 - - : 10_1101-2020_09_09_289074 83 31 BY by IN 10_1101-2020_09_09_289074 83 32 - - HYPH 10_1101-2020_09_09_289074 83 33 NC NC NNP 10_1101-2020_09_09_289074 83 34 - - HYPH 10_1101-2020_09_09_289074 83 35 ND ND NNP 10_1101-2020_09_09_289074 83 36 4.0 4.0 CD 10_1101-2020_09_09_289074 83 37 International International NNP 10_1101-2020_09_09_289074 83 38 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 83 39 under under IN 10_1101-2020_09_09_289074 83 40 a a DT 10_1101-2020_09_09_289074 83 41 ( ( -LRB- 10_1101-2020_09_09_289074 83 42 which which WDT 10_1101-2020_09_09_289074 83 43 was be VBD 10_1101-2020_09_09_289074 83 44 not not RB 10_1101-2020_09_09_289074 83 45 certified certify VBN 10_1101-2020_09_09_289074 83 46 by by IN 10_1101-2020_09_09_289074 83 47 peer peer NN 10_1101-2020_09_09_289074 83 48 review review NN 10_1101-2020_09_09_289074 83 49 ) ) -RRB- 10_1101-2020_09_09_289074 83 50 is be VBZ 10_1101-2020_09_09_289074 83 51 the the DT 10_1101-2020_09_09_289074 83 52 author author NN 10_1101-2020_09_09_289074 83 53 / / SYM 10_1101-2020_09_09_289074 83 54 funder funder NN 10_1101-2020_09_09_289074 83 55 , , , 10_1101-2020_09_09_289074 83 56 who who WP 10_1101-2020_09_09_289074 83 57 has have VBZ 10_1101-2020_09_09_289074 83 58 granted grant VBN 10_1101-2020_09_09_289074 83 59 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 83 60 a a DT 10_1101-2020_09_09_289074 83 61 license license NN 10_1101-2020_09_09_289074 83 62 to to TO 10_1101-2020_09_09_289074 83 63 display display VB 10_1101-2020_09_09_289074 83 64 the the DT 10_1101-2020_09_09_289074 83 65 preprint preprint NN 10_1101-2020_09_09_289074 83 66 in in IN 10_1101-2020_09_09_289074 83 67 perpetuity perpetuity NN 10_1101-2020_09_09_289074 83 68 . . . 10_1101-2020_09_09_289074 84 1 It -PRON- PRP 10_1101-2020_09_09_289074 84 2 is be VBZ 10_1101-2020_09_09_289074 84 3 made make VBN 10_1101-2020_09_09_289074 84 4 The the DT 10_1101-2020_09_09_289074 84 5 copyright copyright NN 10_1101-2020_09_09_289074 84 6 holder holder NN 10_1101-2020_09_09_289074 84 7 for for IN 10_1101-2020_09_09_289074 84 8 this this DT 10_1101-2020_09_09_289074 84 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 84 10 version version NN 10_1101-2020_09_09_289074 84 11 posted post VBD 10_1101-2020_09_09_289074 84 12 January January NNP 10_1101-2020_09_09_289074 84 13 5 5 CD 10_1101-2020_09_09_289074 84 14 , , , 10_1101-2020_09_09_289074 84 15 2021 2021 CD 10_1101-2020_09_09_289074 84 16 . . . 10_1101-2020_09_09_289074 84 17 ; ; : 10_1101-2020_09_09_289074 84 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 84 19 : : : 10_1101-2020_09_09_289074 84 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 84 21 preprint preprint NN 10_1101-2020_09_09_289074 84 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 ADD 10_1101-2020_09_09_289074 84 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NNP 10_1101-2020_09_09_289074 84 24 6 6 CD 10_1101-2020_09_09_289074 84 25 group group NN 10_1101-2020_09_09_289074 84 26 , , , 10_1101-2020_09_09_289074 84 27 donates donate VBZ 10_1101-2020_09_09_289074 84 28 one one CD 10_1101-2020_09_09_289074 84 29 hydrogen hydrogen NN 10_1101-2020_09_09_289074 84 30 bond bond NN 10_1101-2020_09_09_289074 84 31 to to IN 10_1101-2020_09_09_289074 84 32 the the DT 10_1101-2020_09_09_289074 84 33 Spike Spike NNP 10_1101-2020_09_09_289074 84 34 Proline Proline NNP 10_1101-2020_09_09_289074 84 35 499 499 CD 10_1101-2020_09_09_289074 84 36 backbone backbone NN 10_1101-2020_09_09_289074 84 37 : : : 10_1101-2020_09_09_289074 84 38 all all PDT 10_1101-2020_09_09_289074 84 39 these these DT 10_1101-2020_09_09_289074 84 40 AAs aa NNS 10_1101-2020_09_09_289074 84 41 are be VBP 10_1101-2020_09_09_289074 84 42 located locate VBN 10_1101-2020_09_09_289074 84 43 into into IN 10_1101-2020_09_09_289074 84 44 a a DT 10_1101-2020_09_09_289074 84 45 random random JJ 10_1101-2020_09_09_289074 84 46 coil coil NN 10_1101-2020_09_09_289074 84 47 loop loop NN 10_1101-2020_09_09_289074 84 48 of of IN 10_1101-2020_09_09_289074 84 49 Spike Spike NNP 10_1101-2020_09_09_289074 84 50 so so IN 10_1101-2020_09_09_289074 84 51 the the DT 10_1101-2020_09_09_289074 84 52 N439 N439 NNP 10_1101-2020_09_09_289074 84 53 K k NN 10_1101-2020_09_09_289074 84 54 could could MD 10_1101-2020_09_09_289074 84 55 minimally minimally RB 10_1101-2020_09_09_289074 84 56 modify modify VB 10_1101-2020_09_09_289074 84 57 the the DT 10_1101-2020_09_09_289074 84 58 Spike Spike NNP 10_1101-2020_09_09_289074 84 59 - - HYPH 10_1101-2020_09_09_289074 84 60 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 84 61 recognition recognition NN 10_1101-2020_09_09_289074 84 62 . . . 10_1101-2020_09_09_289074 85 1 On on IN 10_1101-2020_09_09_289074 85 2 the the DT 10_1101-2020_09_09_289074 85 3 other other JJ 10_1101-2020_09_09_289074 85 4 hand hand NN 10_1101-2020_09_09_289074 85 5 , , , 10_1101-2020_09_09_289074 85 6 after after IN 10_1101-2020_09_09_289074 85 7 the the DT 10_1101-2020_09_09_289074 85 8 theoretical theoretical JJ 10_1101-2020_09_09_289074 85 9 mutation mutation NN 10_1101-2020_09_09_289074 85 10 of of IN 10_1101-2020_09_09_289074 85 11 the the DT 10_1101-2020_09_09_289074 85 12 Asparagine Asparagine NNP 10_1101-2020_09_09_289074 85 13 439 439 CD 10_1101-2020_09_09_289074 85 14 with with IN 10_1101-2020_09_09_289074 85 15 a a DT 10_1101-2020_09_09_289074 85 16 Lysine Lysine NNP 10_1101-2020_09_09_289074 85 17 , , , 10_1101-2020_09_09_289074 85 18 it -PRON- PRP 10_1101-2020_09_09_289074 85 19 is be VBZ 10_1101-2020_09_09_289074 85 20 possible possible JJ 10_1101-2020_09_09_289074 85 21 to to TO 10_1101-2020_09_09_289074 85 22 predict predict VB 10_1101-2020_09_09_289074 85 23 a a DT 10_1101-2020_09_09_289074 85 24 productive productive JJ 10_1101-2020_09_09_289074 85 25 electrostatic electrostatic JJ 10_1101-2020_09_09_289074 85 26 interaction interaction NN 10_1101-2020_09_09_289074 85 27 between between IN 10_1101-2020_09_09_289074 85 28 the the DT 10_1101-2020_09_09_289074 85 29 new new JJ 10_1101-2020_09_09_289074 85 30 net net NN 10_1101-2020_09_09_289074 85 31 positively positively RB 10_1101-2020_09_09_289074 85 32 charged charge VBN 10_1101-2020_09_09_289074 85 33 residue residue NN 10_1101-2020_09_09_289074 85 34 and and CC 10_1101-2020_09_09_289074 85 35 the the DT 10_1101-2020_09_09_289074 85 36 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 85 37 Glutamate Glutamate NNP 10_1101-2020_09_09_289074 85 38 329 329 CD 10_1101-2020_09_09_289074 85 39 . . . 10_1101-2020_09_09_289074 86 1 Such such PDT 10_1101-2020_09_09_289074 86 2 a a DT 10_1101-2020_09_09_289074 86 3 long long JJ 10_1101-2020_09_09_289074 86 4 - - HYPH 10_1101-2020_09_09_289074 86 5 distance distance NN 10_1101-2020_09_09_289074 86 6 interaction interaction NN 10_1101-2020_09_09_289074 86 7 could could MD 10_1101-2020_09_09_289074 86 8 improve improve VB 10_1101-2020_09_09_289074 86 9 the the DT 10_1101-2020_09_09_289074 86 10 stabilization stabilization NN 10_1101-2020_09_09_289074 86 11 of of IN 10_1101-2020_09_09_289074 86 12 the the DT 10_1101-2020_09_09_289074 86 13 complex complex NN 10_1101-2020_09_09_289074 86 14 with with IN 10_1101-2020_09_09_289074 86 15 respect respect NN 10_1101-2020_09_09_289074 86 16 to to IN 10_1101-2020_09_09_289074 86 17 the the DT 10_1101-2020_09_09_289074 86 18 Spike spike JJ 10_1101-2020_09_09_289074 86 19 wild wild JJ 10_1101-2020_09_09_289074 86 20 type type NN 10_1101-2020_09_09_289074 86 21 ( ( -LRB- 10_1101-2020_09_09_289074 86 22 Figure figure NN 10_1101-2020_09_09_289074 86 23 S1 s1 NN 10_1101-2020_09_09_289074 86 24 ) ) -RRB- 10_1101-2020_09_09_289074 86 25 . . . 10_1101-2020_09_09_289074 87 1 A a DT 10_1101-2020_09_09_289074 87 2 similar similar JJ 10_1101-2020_09_09_289074 87 3 effect effect NN 10_1101-2020_09_09_289074 87 4 could could MD 10_1101-2020_09_09_289074 87 5 be be VB 10_1101-2020_09_09_289074 87 6 addressed address VBN 10_1101-2020_09_09_289074 87 7 to to IN 10_1101-2020_09_09_289074 87 8 the the DT 10_1101-2020_09_09_289074 87 9 mutation mutation NN 10_1101-2020_09_09_289074 87 10 at at IN 10_1101-2020_09_09_289074 87 11 position position NN 10_1101-2020_09_09_289074 87 12 477 477 CD 10_1101-2020_09_09_289074 87 13 . . . 10_1101-2020_09_09_289074 88 1 Serine Serine NNP 10_1101-2020_09_09_289074 88 2 ( ( -LRB- 10_1101-2020_09_09_289074 88 3 S S NNP 10_1101-2020_09_09_289074 88 4 ) ) -RRB- 10_1101-2020_09_09_289074 88 5 477 477 CD 10_1101-2020_09_09_289074 88 6 is be VBZ 10_1101-2020_09_09_289074 88 7 a a DT 10_1101-2020_09_09_289074 88 8 weak weak JJ 10_1101-2020_09_09_289074 88 9 contributor contributor NN 10_1101-2020_09_09_289074 88 10 to to IN 10_1101-2020_09_09_289074 88 11 the the DT 10_1101-2020_09_09_289074 88 12 complex complex JJ 10_1101-2020_09_09_289074 88 13 interaction interaction NN 10_1101-2020_09_09_289074 88 14 . . . 10_1101-2020_09_09_289074 89 1 In in IN 10_1101-2020_09_09_289074 89 2 all all DT 10_1101-2020_09_09_289074 89 3 PDB PDB NNP 10_1101-2020_09_09_289074 89 4 entries entry NNS 10_1101-2020_09_09_289074 89 5 we -PRON- PRP 10_1101-2020_09_09_289074 89 6 selected select VBD 10_1101-2020_09_09_289074 89 7 , , , 10_1101-2020_09_09_289074 89 8 Serine Serine NNP 10_1101-2020_09_09_289074 89 9 477 477 CD 10_1101-2020_09_09_289074 89 10 is be VBZ 10_1101-2020_09_09_289074 89 11 located locate VBN 10_1101-2020_09_09_289074 89 12 into into IN 10_1101-2020_09_09_289074 89 13 a a DT 10_1101-2020_09_09_289074 89 14 solvent solvent NN 10_1101-2020_09_09_289074 89 15 exposed expose VBN 10_1101-2020_09_09_289074 89 16 random random JJ 10_1101-2020_09_09_289074 89 17 coil coil NNP 10_1101-2020_09_09_289074 89 18 loop loop NN 10_1101-2020_09_09_289074 89 19 . . . 10_1101-2020_09_09_289074 90 1 No no DT 10_1101-2020_09_09_289074 90 2 interaction interaction NN 10_1101-2020_09_09_289074 90 3 with with IN 10_1101-2020_09_09_289074 90 4 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 90 5 or or CC 10_1101-2020_09_09_289074 90 6 Spike Spike NNP 10_1101-2020_09_09_289074 90 7 residues residue NNS 10_1101-2020_09_09_289074 90 8 can can MD 10_1101-2020_09_09_289074 90 9 be be VB 10_1101-2020_09_09_289074 90 10 observed observe VBN 10_1101-2020_09_09_289074 90 11 . . . 10_1101-2020_09_09_289074 91 1 Actually actually RB 10_1101-2020_09_09_289074 91 2 , , , 10_1101-2020_09_09_289074 91 3 the the DT 10_1101-2020_09_09_289074 91 4 GBPM GBPM NNP 10_1101-2020_09_09_289074 91 5 analysis analysis NN 10_1101-2020_09_09_289074 91 6 included include VBD 10_1101-2020_09_09_289074 91 7 such such PDT 10_1101-2020_09_09_289074 91 8 a a DT 10_1101-2020_09_09_289074 91 9 residue residue NN 10_1101-2020_09_09_289074 91 10 in in IN 10_1101-2020_09_09_289074 91 11 Q2 q2 NN 10_1101-2020_09_09_289074 91 12 . . . 10_1101-2020_09_09_289074 92 1 Conversely conversely RB 10_1101-2020_09_09_289074 92 2 , , , 10_1101-2020_09_09_289074 92 3 its -PRON- PRP$ 10_1101-2020_09_09_289074 92 4 mutation mutation NN 10_1101-2020_09_09_289074 92 5 to to IN 10_1101-2020_09_09_289074 92 6 Asparagine Asparagine NNP 10_1101-2020_09_09_289074 92 7 ( ( -LRB- 10_1101-2020_09_09_289074 92 8 S477N S477N NNP 10_1101-2020_09_09_289074 92 9 ) ) -RRB- 10_1101-2020_09_09_289074 92 10 , , , 10_1101-2020_09_09_289074 92 11 in in IN 10_1101-2020_09_09_289074 92 12 our -PRON- PRP$ 10_1101-2020_09_09_289074 92 13 in in IN 10_1101-2020_09_09_289074 92 14 silico silico NNP 10_1101-2020_09_09_289074 92 15 model model NN 10_1101-2020_09_09_289074 92 16 , , , 10_1101-2020_09_09_289074 92 17 revealed reveal VBD 10_1101-2020_09_09_289074 92 18 the the DT 10_1101-2020_09_09_289074 92 19 possibility possibility NN 10_1101-2020_09_09_289074 92 20 to to TO 10_1101-2020_09_09_289074 92 21 establish establish VB 10_1101-2020_09_09_289074 92 22 hydrogen hydrogen NN 10_1101-2020_09_09_289074 92 23 bond bond NN 10_1101-2020_09_09_289074 92 24 to to IN 10_1101-2020_09_09_289074 92 25 the the DT 10_1101-2020_09_09_289074 92 26 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 92 27 Serine Serine NNP 10_1101-2020_09_09_289074 92 28 19 19 CD 10_1101-2020_09_09_289074 92 29 that that WDT 10_1101-2020_09_09_289074 92 30 can can MD 10_1101-2020_09_09_289074 92 31 clearly clearly RB 10_1101-2020_09_09_289074 92 32 result result VB 10_1101-2020_09_09_289074 92 33 in in IN 10_1101-2020_09_09_289074 92 34 a a DT 10_1101-2020_09_09_289074 92 35 stabilization stabilization NN 10_1101-2020_09_09_289074 92 36 of of IN 10_1101-2020_09_09_289074 92 37 the the DT 10_1101-2020_09_09_289074 92 38 complex complex JJ 10_1101-2020_09_09_289074 92 39 ( ( -LRB- 10_1101-2020_09_09_289074 92 40 Figure Figure NNP 10_1101-2020_09_09_289074 92 41 S2 S2 NNP 10_1101-2020_09_09_289074 92 42 ) ) -RRB- 10_1101-2020_09_09_289074 92 43 . . . 10_1101-2020_09_09_289074 93 1 Moreover moreover RB 10_1101-2020_09_09_289074 93 2 , , , 10_1101-2020_09_09_289074 93 3 position position NN 10_1101-2020_09_09_289074 93 4 477 477 CD 10_1101-2020_09_09_289074 93 5 is be VBZ 10_1101-2020_09_09_289074 93 6 also also RB 10_1101-2020_09_09_289074 93 7 affected affect VBN 10_1101-2020_09_09_289074 93 8 by by IN 10_1101-2020_09_09_289074 93 9 three three CD 10_1101-2020_09_09_289074 93 10 other other JJ 10_1101-2020_09_09_289074 93 11 events event NNS 10_1101-2020_09_09_289074 93 12 with with IN 10_1101-2020_09_09_289074 93 13 lower low JJR 10_1101-2020_09_09_289074 93 14 occurrence occurrence NN 10_1101-2020_09_09_289074 93 15 : : : 10_1101-2020_09_09_289074 93 16 S477I S477I NNP 10_1101-2020_09_09_289074 93 17 , , , 10_1101-2020_09_09_289074 93 18 S477R S477R NNP 10_1101-2020_09_09_289074 93 19 and and CC 10_1101-2020_09_09_289074 93 20 S477 S477 NNP 10_1101-2020_09_09_289074 93 21 G G NNP 10_1101-2020_09_09_289074 93 22 , , , 10_1101-2020_09_09_289074 93 23 with with IN 10_1101-2020_09_09_289074 93 24 6 6 CD 10_1101-2020_09_09_289074 93 25 , , , 10_1101-2020_09_09_289074 93 26 2 2 CD 10_1101-2020_09_09_289074 93 27 and and CC 10_1101-2020_09_09_289074 93 28 2 2 CD 10_1101-2020_09_09_289074 93 29 observations observation NNS 10_1101-2020_09_09_289074 93 30 ( ( -LRB- 10_1101-2020_09_09_289074 93 31 Table table NN 10_1101-2020_09_09_289074 93 32 4 4 CD 10_1101-2020_09_09_289074 93 33 ) ) -RRB- 10_1101-2020_09_09_289074 93 34 . . . 10_1101-2020_09_09_289074 94 1 Among among IN 10_1101-2020_09_09_289074 94 2 all all DT 10_1101-2020_09_09_289074 94 3 , , , 10_1101-2020_09_09_289074 94 4 the the DT 10_1101-2020_09_09_289074 94 5 S447R s447r CD 10_1101-2020_09_09_289074 94 6 could could MD 10_1101-2020_09_09_289074 94 7 be be VB 10_1101-2020_09_09_289074 94 8 the the DT 10_1101-2020_09_09_289074 94 9 most most RBS 10_1101-2020_09_09_289074 94 10 interesting interesting JJ 10_1101-2020_09_09_289074 94 11 one one CD 10_1101-2020_09_09_289074 94 12 . . . 10_1101-2020_09_09_289074 95 1 Actually actually RB 10_1101-2020_09_09_289074 95 2 , , , 10_1101-2020_09_09_289074 95 3 a a DT 10_1101-2020_09_09_289074 95 4 net net NN 10_1101-2020_09_09_289074 95 5 positively positively RB 10_1101-2020_09_09_289074 95 6 charged charge VBN 10_1101-2020_09_09_289074 95 7 residue residue NN 10_1101-2020_09_09_289074 95 8 , , , 10_1101-2020_09_09_289074 95 9 such such JJ 10_1101-2020_09_09_289074 95 10 as as IN 10_1101-2020_09_09_289074 95 11 Arginine Arginine NNP 10_1101-2020_09_09_289074 95 12 ( ( -LRB- 10_1101-2020_09_09_289074 95 13 R R NNP 10_1101-2020_09_09_289074 95 14 ) ) -RRB- 10_1101-2020_09_09_289074 95 15 , , , 10_1101-2020_09_09_289074 95 16 can can MD 10_1101-2020_09_09_289074 95 17 establish establish VB 10_1101-2020_09_09_289074 95 18 a a DT 10_1101-2020_09_09_289074 95 19 weak weak JJ 10_1101-2020_09_09_289074 95 20 electrostatic electrostatic JJ 10_1101-2020_09_09_289074 95 21 interaction interaction NN 10_1101-2020_09_09_289074 95 22 to to IN 10_1101-2020_09_09_289074 95 23 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 95 24 Glutamate Glutamate NNP 10_1101-2020_09_09_289074 95 25 87 87 CD 10_1101-2020_09_09_289074 95 26 , , , 10_1101-2020_09_09_289074 95 27 as as IN 10_1101-2020_09_09_289074 95 28 suggested suggest VBN 10_1101-2020_09_09_289074 95 29 by by IN 10_1101-2020_09_09_289074 95 30 a a DT 10_1101-2020_09_09_289074 95 31 theoretical theoretical JJ 10_1101-2020_09_09_289074 95 32 model model NN 10_1101-2020_09_09_289074 95 33 we -PRON- PRP 10_1101-2020_09_09_289074 95 34 built build VBD 10_1101-2020_09_09_289074 95 35 . . . 10_1101-2020_09_09_289074 96 1 The the DT 10_1101-2020_09_09_289074 96 2 S477I S477I NNP 10_1101-2020_09_09_289074 96 3 and and CC 10_1101-2020_09_09_289074 96 4 S477 S477 NNP 10_1101-2020_09_09_289074 96 5 G G NNP 10_1101-2020_09_09_289074 96 6 could could MD 10_1101-2020_09_09_289074 96 7 modify modify VB 10_1101-2020_09_09_289074 96 8 the the DT 10_1101-2020_09_09_289074 96 9 conformation conformation NN 10_1101-2020_09_09_289074 96 10 of of IN 10_1101-2020_09_09_289074 96 11 a a DT 10_1101-2020_09_09_289074 96 12 random random JJ 10_1101-2020_09_09_289074 96 13 coil coil NN 10_1101-2020_09_09_289074 96 14 segment segment NN 10_1101-2020_09_09_289074 96 15 , , , 10_1101-2020_09_09_289074 96 16 so so IN 10_1101-2020_09_09_289074 96 17 it -PRON- PRP 10_1101-2020_09_09_289074 96 18 does do VBZ 10_1101-2020_09_09_289074 96 19 not not RB 10_1101-2020_09_09_289074 96 20 appear appear VB 10_1101-2020_09_09_289074 96 21 very very RB 10_1101-2020_09_09_289074 96 22 relevant relevant JJ 10_1101-2020_09_09_289074 96 23 . . . 10_1101-2020_09_09_289074 97 1 Conversely conversely RB 10_1101-2020_09_09_289074 97 2 , , , 10_1101-2020_09_09_289074 97 3 S477N S477N NNP 10_1101-2020_09_09_289074 97 4 and and CC 10_1101-2020_09_09_289074 97 5 S477 S477 NNP 10_1101-2020_09_09_289074 97 6 G G NNP 10_1101-2020_09_09_289074 97 7 could could MD 10_1101-2020_09_09_289074 97 8 productively productively RB 10_1101-2020_09_09_289074 97 9 contribute contribute VB 10_1101-2020_09_09_289074 97 10 to to IN 10_1101-2020_09_09_289074 97 11 the the DT 10_1101-2020_09_09_289074 97 12 Spike Spike NNP 10_1101-2020_09_09_289074 97 13 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 97 14 complex complex JJ 10_1101-2020_09_09_289074 97 15 stabilization stabilization NN 10_1101-2020_09_09_289074 97 16 . . . 10_1101-2020_09_09_289074 98 1 Of of RB 10_1101-2020_09_09_289074 98 2 course course RB 10_1101-2020_09_09_289074 98 3 , , , 10_1101-2020_09_09_289074 98 4 deeper deeply RBR 10_1101-2020_09_09_289074 98 5 theoretical theoretical JJ 10_1101-2020_09_09_289074 98 6 and and CC 10_1101-2020_09_09_289074 98 7 experimental experimental JJ 10_1101-2020_09_09_289074 98 8 investigations investigation NNS 10_1101-2020_09_09_289074 98 9 should should MD 10_1101-2020_09_09_289074 98 10 be be VB 10_1101-2020_09_09_289074 98 11 carried carry VBN 10_1101-2020_09_09_289074 98 12 out out RP 10_1101-2020_09_09_289074 98 13 to to TO 10_1101-2020_09_09_289074 98 14 confirm confirm VB 10_1101-2020_09_09_289074 98 15 this this DT 10_1101-2020_09_09_289074 98 16 hypothesis hypothesis NN 10_1101-2020_09_09_289074 98 17 . . . 10_1101-2020_09_09_289074 99 1 Unfortunately unfortunately RB 10_1101-2020_09_09_289074 99 2 , , , 10_1101-2020_09_09_289074 99 3 full full JJ 10_1101-2020_09_09_289074 99 4 - - HYPH 10_1101-2020_09_09_289074 99 5 scale scale NN 10_1101-2020_09_09_289074 99 6 simulations simulation NNS 10_1101-2020_09_09_289074 99 7 can can MD 10_1101-2020_09_09_289074 99 8 not not RB 10_1101-2020_09_09_289074 99 9 be be VB 10_1101-2020_09_09_289074 99 10 rigorously rigorously RB 10_1101-2020_09_09_289074 99 11 performed perform VBN 10_1101-2020_09_09_289074 99 12 today today NN 10_1101-2020_09_09_289074 99 13 because because IN 10_1101-2020_09_09_289074 99 14 the the DT 10_1101-2020_09_09_289074 99 15 available available JJ 10_1101-2020_09_09_289074 99 16 3D 3d JJ 10_1101-2020_09_09_289074 99 17 structural structural JJ 10_1101-2020_09_09_289074 99 18 models model NNS 10_1101-2020_09_09_289074 99 19 report report VBP 10_1101-2020_09_09_289074 99 20 only only RB 10_1101-2020_09_09_289074 99 21 fragments fragment NNS 10_1101-2020_09_09_289074 99 22 of of IN 10_1101-2020_09_09_289074 99 23 the the DT 10_1101-2020_09_09_289074 99 24 complex complex NN 10_1101-2020_09_09_289074 99 25 between between IN 10_1101-2020_09_09_289074 99 26 Spike Spike NNP 10_1101-2020_09_09_289074 99 27 and and CC 10_1101-2020_09_09_289074 99 28 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 99 29 . . . 10_1101-2020_09_09_289074 100 1 The the DT 10_1101-2020_09_09_289074 100 2 third third JJ 10_1101-2020_09_09_289074 100 3 most most RBS 10_1101-2020_09_09_289074 100 4 common common JJ 10_1101-2020_09_09_289074 100 5 mutation mutation NN 10_1101-2020_09_09_289074 100 6 , , , 10_1101-2020_09_09_289074 100 7 N501Y n501y CD 10_1101-2020_09_09_289074 100 8 ( ( -LRB- 10_1101-2020_09_09_289074 100 9 Fig fig NN 10_1101-2020_09_09_289074 100 10 3 3 CD 10_1101-2020_09_09_289074 100 11 ) ) -RRB- 10_1101-2020_09_09_289074 100 12 , , , 10_1101-2020_09_09_289074 100 13 targets target VBZ 10_1101-2020_09_09_289074 100 14 an an DT 10_1101-2020_09_09_289074 100 15 AA AA NNP 10_1101-2020_09_09_289074 100 16 predicted predict VBD 10_1101-2020_09_09_289074 100 17 to to TO 10_1101-2020_09_09_289074 100 18 have have VB 10_1101-2020_09_09_289074 100 19 a a DT 10_1101-2020_09_09_289074 100 20 strong strong JJ 10_1101-2020_09_09_289074 100 21 role role NN 10_1101-2020_09_09_289074 100 22 in in IN 10_1101-2020_09_09_289074 100 23 the the DT 10_1101-2020_09_09_289074 100 24 interaction interaction NN 10_1101-2020_09_09_289074 100 25 in in IN 10_1101-2020_09_09_289074 100 26 all all DT 10_1101-2020_09_09_289074 100 27 four four CD 10_1101-2020_09_09_289074 100 28 models model NNS 10_1101-2020_09_09_289074 100 29 , , , 10_1101-2020_09_09_289074 100 30 sitting sit VBG 10_1101-2020_09_09_289074 100 31 in in IN 10_1101-2020_09_09_289074 100 32 the the DT 10_1101-2020_09_09_289074 100 33 GBPM GBPM NNP 10_1101-2020_09_09_289074 100 34 Q1 Q1 NNP 10_1101-2020_09_09_289074 100 35 . . . 10_1101-2020_09_09_289074 101 1 N501Y N501Y NNP 10_1101-2020_09_09_289074 101 2 was be VBD 10_1101-2020_09_09_289074 101 3 detected detect VBN 10_1101-2020_09_09_289074 101 4 in in IN 10_1101-2020_09_09_289074 101 5 4,921 4,921 CD 10_1101-2020_09_09_289074 101 6 patients patient NNS 10_1101-2020_09_09_289074 101 7 ( ( -LRB- 10_1101-2020_09_09_289074 101 8 1.67 1.67 CD 10_1101-2020_09_09_289074 101 9 % % NN 10_1101-2020_09_09_289074 101 10 of of IN 10_1101-2020_09_09_289074 101 11 the the DT 10_1101-2020_09_09_289074 101 12 dataset dataset NN 10_1101-2020_09_09_289074 101 13 ) ) -RRB- 10_1101-2020_09_09_289074 101 14 : : : 10_1101-2020_09_09_289074 101 15 the the DT 10_1101-2020_09_09_289074 101 16 majority majority NN 10_1101-2020_09_09_289074 101 17 of of IN 10_1101-2020_09_09_289074 101 18 which which WDT 10_1101-2020_09_09_289074 101 19 were be VBD 10_1101-2020_09_09_289074 101 20 located locate VBN 10_1101-2020_09_09_289074 101 21 in in IN 10_1101-2020_09_09_289074 101 22 the the DT 10_1101-2020_09_09_289074 101 23 United United NNP 10_1101-2020_09_09_289074 101 24 Kingdom Kingdom NNP 10_1101-2020_09_09_289074 101 25 ( ( -LRB- 10_1101-2020_09_09_289074 101 26 29 29 CD 10_1101-2020_09_09_289074 101 27 ) ) -RRB- 10_1101-2020_09_09_289074 101 28 . . . 10_1101-2020_09_09_289074 102 1 From from IN 10_1101-2020_09_09_289074 102 2 a a DT 10_1101-2020_09_09_289074 102 3 structural structural JJ 10_1101-2020_09_09_289074 102 4 point point NN 10_1101-2020_09_09_289074 102 5 of of IN 10_1101-2020_09_09_289074 102 6 view view NN 10_1101-2020_09_09_289074 102 7 , , , 10_1101-2020_09_09_289074 102 8 we -PRON- PRP 10_1101-2020_09_09_289074 102 9 predict predict VBP 10_1101-2020_09_09_289074 102 10 that that IN 10_1101-2020_09_09_289074 102 11 a a DT 10_1101-2020_09_09_289074 102 12 substitution substitution NN 10_1101-2020_09_09_289074 102 13 , , , 10_1101-2020_09_09_289074 102 14 at at IN 10_1101-2020_09_09_289074 102 15 position position NN 10_1101-2020_09_09_289074 102 16 501 501 CD 10_1101-2020_09_09_289074 102 17 , , , 10_1101-2020_09_09_289074 102 18 of of IN 10_1101-2020_09_09_289074 102 19 an an DT 10_1101-2020_09_09_289074 102 20 Asparagine Asparagine NNP 10_1101-2020_09_09_289074 102 21 ( ( -LRB- 10_1101-2020_09_09_289074 102 22 N n NN 10_1101-2020_09_09_289074 102 23 ) ) -RRB- 10_1101-2020_09_09_289074 102 24 with with IN 10_1101-2020_09_09_289074 102 25 a a DT 10_1101-2020_09_09_289074 102 26 Tyrosine Tyrosine NNP 10_1101-2020_09_09_289074 102 27 ( ( -LRB- 10_1101-2020_09_09_289074 102 28 Y y NN 10_1101-2020_09_09_289074 102 29 ) ) -RRB- 10_1101-2020_09_09_289074 102 30 may may MD 10_1101-2020_09_09_289074 102 31 have have VB 10_1101-2020_09_09_289074 102 32 an an DT 10_1101-2020_09_09_289074 102 33 effect effect NN 10_1101-2020_09_09_289074 102 34 : : : 10_1101-2020_09_09_289074 102 35 their -PRON- PRP$ 10_1101-2020_09_09_289074 102 36 Total total JJ 10_1101-2020_09_09_289074 102 37 Polar Polar NNP 10_1101-2020_09_09_289074 102 38 Surface Surface NNP 10_1101-2020_09_09_289074 102 39 Area Area NNP 10_1101-2020_09_09_289074 102 40 ( ( -LRB- 10_1101-2020_09_09_289074 102 41 TPSA TPSA NNP 10_1101-2020_09_09_289074 102 42 ) ) -RRB- 10_1101-2020_09_09_289074 102 43 , , , 10_1101-2020_09_09_289074 102 44 equal equal JJ 10_1101-2020_09_09_289074 102 45 to to IN 10_1101-2020_09_09_289074 102 46 101.29 101.29 CD 10_1101-2020_09_09_289074 102 47 and and CC 10_1101-2020_09_09_289074 102 48 to to TO 10_1101-2020_09_09_289074 102 49 78.43 78.43 CD 10_1101-2020_09_09_289074 102 50 Å2 å2 NN 10_1101-2020_09_09_289074 102 51 respectively respectively RB 10_1101-2020_09_09_289074 102 52 , , , 10_1101-2020_09_09_289074 102 53 is be VBZ 10_1101-2020_09_09_289074 102 54 different different JJ 10_1101-2020_09_09_289074 102 55 , , , 10_1101-2020_09_09_289074 102 56 however however RB 10_1101-2020_09_09_289074 102 57 both both CC 10_1101-2020_09_09_289074 102 58 their -PRON- PRP$ 10_1101-2020_09_09_289074 102 59 sidechains sidechain NNS 10_1101-2020_09_09_289074 102 60 can can MD 10_1101-2020_09_09_289074 102 61 donate donate VB 10_1101-2020_09_09_289074 102 62 / / SYM 10_1101-2020_09_09_289074 102 63 accept accept VB 10_1101-2020_09_09_289074 102 64 a a DT 10_1101-2020_09_09_289074 102 65 hydrogen hydrogen NN 10_1101-2020_09_09_289074 102 66 bond bond NN 10_1101-2020_09_09_289074 102 67 . . . 10_1101-2020_09_09_289074 103 1 Therefore therefore RB 10_1101-2020_09_09_289074 103 2 , , , 10_1101-2020_09_09_289074 103 3 their -PRON- PRP$ 10_1101-2020_09_09_289074 103 4 contribution contribution NN 10_1101-2020_09_09_289074 103 5 to to IN 10_1101-2020_09_09_289074 103 6 complex complex JJ 10_1101-2020_09_09_289074 103 7 stabilization stabilization NN 10_1101-2020_09_09_289074 103 8 may may MD 10_1101-2020_09_09_289074 103 9 be be VB 10_1101-2020_09_09_289074 103 10 slightly slightly RB 10_1101-2020_09_09_289074 103 11 different different JJ 10_1101-2020_09_09_289074 103 12 , , , 10_1101-2020_09_09_289074 103 13 also also RB 10_1101-2020_09_09_289074 103 14 taking take VBG 10_1101-2020_09_09_289074 103 15 into into IN 10_1101-2020_09_09_289074 103 16 account account NN 10_1101-2020_09_09_289074 103 17 the the DT 10_1101-2020_09_09_289074 103 18 chemical chemical NN 10_1101-2020_09_09_289074 103 19 environment environment NN 10_1101-2020_09_09_289074 103 20 . . . 10_1101-2020_09_09_289074 104 1 In in IN 10_1101-2020_09_09_289074 104 2 fact fact NN 10_1101-2020_09_09_289074 104 3 , , , 10_1101-2020_09_09_289074 104 4 the the DT 10_1101-2020_09_09_289074 104 5 wild wild JJ 10_1101-2020_09_09_289074 104 6 type type NN 10_1101-2020_09_09_289074 104 7 Asparagine Asparagine NNP 10_1101-2020_09_09_289074 104 8 501 501 CD 10_1101-2020_09_09_289074 104 9 donates donate VBZ 10_1101-2020_09_09_289074 104 10 one one CD 10_1101-2020_09_09_289074 104 11 hydrogen hydrogen NN 10_1101-2020_09_09_289074 104 12 bond bond NN 10_1101-2020_09_09_289074 104 13 to to IN 10_1101-2020_09_09_289074 104 14 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 104 15 Tyrosine Tyrosine NNP 10_1101-2020_09_09_289074 104 16 41 41 CD 10_1101-2020_09_09_289074 104 17 : : : 10_1101-2020_09_09_289074 104 18 such such PDT 10_1101-2020_09_09_289074 104 19 an an DT 10_1101-2020_09_09_289074 104 20 interaction interaction NN 10_1101-2020_09_09_289074 104 21 could could MD 10_1101-2020_09_09_289074 104 22 be be VB 10_1101-2020_09_09_289074 104 23 possible possible JJ 10_1101-2020_09_09_289074 104 24 also also RB 10_1101-2020_09_09_289074 104 25 for for IN 10_1101-2020_09_09_289074 104 26 N501Y n501y CD 10_1101-2020_09_09_289074 104 27 mutant mutant JJ 10_1101-2020_09_09_289074 104 28 or or CC 10_1101-2020_09_09_289074 104 29 , , , 10_1101-2020_09_09_289074 104 30 as as IN 10_1101-2020_09_09_289074 104 31 we -PRON- PRP 10_1101-2020_09_09_289074 104 32 observed observe VBD 10_1101-2020_09_09_289074 104 33 in in IN 10_1101-2020_09_09_289074 104 34 our -PRON- PRP$ 10_1101-2020_09_09_289074 104 35 theoretical theoretical JJ 10_1101-2020_09_09_289074 104 36 model model NN 10_1101-2020_09_09_289074 104 37 , , , 10_1101-2020_09_09_289074 104 38 it -PRON- PRP 10_1101-2020_09_09_289074 104 39 could could MD 10_1101-2020_09_09_289074 104 40 be be VB 10_1101-2020_09_09_289074 104 41 replaced replace VBN 10_1101-2020_09_09_289074 104 42 by by IN 10_1101-2020_09_09_289074 104 43 pi pi NN 10_1101-2020_09_09_289074 104 44 - - HYPH 10_1101-2020_09_09_289074 104 45 pi pi NN 10_1101-2020_09_09_289074 104 46 stacking stack VBG 10_1101-2020_09_09_289074 104 47 ( ( -LRB- 10_1101-2020_09_09_289074 104 48 Figure Figure NNP 10_1101-2020_09_09_289074 104 49 S3 S3 NNP 10_1101-2020_09_09_289074 104 50 ) ) -RRB- 10_1101-2020_09_09_289074 104 51 . . . 10_1101-2020_09_09_289074 105 1 The the DT 10_1101-2020_09_09_289074 105 2 rapid rapid JJ 10_1101-2020_09_09_289074 105 3 increase increase NN 10_1101-2020_09_09_289074 105 4 in in IN 10_1101-2020_09_09_289074 105 5 frequency frequency NN 10_1101-2020_09_09_289074 105 6 of of IN 10_1101-2020_09_09_289074 105 7 mutation mutation NN 10_1101-2020_09_09_289074 105 8 N501Y n501y CD 10_1101-2020_09_09_289074 105 9 has have VBZ 10_1101-2020_09_09_289074 105 10 been be VBN 10_1101-2020_09_09_289074 105 11 recently recently RB 10_1101-2020_09_09_289074 105 12 observed observe VBN 10_1101-2020_09_09_289074 105 13 in in IN 10_1101-2020_09_09_289074 105 14 the the DT 10_1101-2020_09_09_289074 105 15 United United NNP 10_1101-2020_09_09_289074 105 16 Kingdom Kingdom NNP 10_1101-2020_09_09_289074 105 17 and and CC 10_1101-2020_09_09_289074 105 18 other other JJ 10_1101-2020_09_09_289074 105 19 countries country NNS 10_1101-2020_09_09_289074 105 20 , , , 10_1101-2020_09_09_289074 105 21 as as IN 10_1101-2020_09_09_289074 105 22 it -PRON- PRP 10_1101-2020_09_09_289074 105 23 is be VBZ 10_1101-2020_09_09_289074 105 24 one one CD 10_1101-2020_09_09_289074 105 25 of of IN 10_1101-2020_09_09_289074 105 26 the the DT 10_1101-2020_09_09_289074 105 27 variants variant NNS 10_1101-2020_09_09_289074 105 28 characterizing characterize VBG 10_1101-2020_09_09_289074 105 29 lineage lineage NN 10_1101-2020_09_09_289074 105 30 B1.1.7 B1.1.7 NNP 10_1101-2020_09_09_289074 105 31 ( ( -LRB- 10_1101-2020_09_09_289074 105 32 30 30 CD 10_1101-2020_09_09_289074 105 33 ) ) -RRB- 10_1101-2020_09_09_289074 105 34 . . . 10_1101-2020_09_09_289074 106 1 The the DT 10_1101-2020_09_09_289074 106 2 Asparagine Asparagine NNP 10_1101-2020_09_09_289074 106 3 / / SYM 10_1101-2020_09_09_289074 106 4 Tyrosine Tyrosine NNP 10_1101-2020_09_09_289074 106 5 substitution substitution NN 10_1101-2020_09_09_289074 106 6 in in IN 10_1101-2020_09_09_289074 106 7 Spike Spike NNP 10_1101-2020_09_09_289074 106 8 position position NN 10_1101-2020_09_09_289074 106 9 501 501 CD 10_1101-2020_09_09_289074 106 10 could could MD 10_1101-2020_09_09_289074 106 11 contribute contribute VB 10_1101-2020_09_09_289074 106 12 to to TO 10_1101-2020_09_09_289074 106 13 determine determine VB 10_1101-2020_09_09_289074 106 14 an an DT 10_1101-2020_09_09_289074 106 15 evolutionary evolutionary JJ 10_1101-2020_09_09_289074 106 16 advantage advantage NN 10_1101-2020_09_09_289074 106 17 for for IN 10_1101-2020_09_09_289074 106 18 this this DT 10_1101-2020_09_09_289074 106 19 lineage lineage NN 10_1101-2020_09_09_289074 106 20 , , , 10_1101-2020_09_09_289074 106 21 based base VBN 10_1101-2020_09_09_289074 106 22 on on IN 10_1101-2020_09_09_289074 106 23 differential differential JJ 10_1101-2020_09_09_289074 106 24 affinity affinity NN 10_1101-2020_09_09_289074 106 25 for for IN 10_1101-2020_09_09_289074 106 26 the the DT 10_1101-2020_09_09_289074 106 27 human human JJ 10_1101-2020_09_09_289074 106 28 receptor receptor NN 10_1101-2020_09_09_289074 106 29 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 106 30 ( ( -LRB- 10_1101-2020_09_09_289074 106 31 31 31 CD 10_1101-2020_09_09_289074 106 32 , , , 10_1101-2020_09_09_289074 106 33 32 32 CD 10_1101-2020_09_09_289074 106 34 ) ) -RRB- 10_1101-2020_09_09_289074 106 35 . . . 10_1101-2020_09_09_289074 107 1 A a DT 10_1101-2020_09_09_289074 107 2 less less RBR 10_1101-2020_09_09_289074 107 3 frequent frequent JJ 10_1101-2020_09_09_289074 107 4 mutation mutation NN 10_1101-2020_09_09_289074 107 5 amongst amongst IN 10_1101-2020_09_09_289074 107 6 those those DT 10_1101-2020_09_09_289074 107 7 predicted predict VBN 10_1101-2020_09_09_289074 107 8 to to TO 10_1101-2020_09_09_289074 107 9 contribute contribute VB 10_1101-2020_09_09_289074 107 10 to to IN 10_1101-2020_09_09_289074 107 11 the the DT 10_1101-2020_09_09_289074 107 12 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 107 13 / / SYM 10_1101-2020_09_09_289074 107 14 Spike Spike NNP 10_1101-2020_09_09_289074 107 15 interaction interaction NN 10_1101-2020_09_09_289074 107 16 is be VBZ 10_1101-2020_09_09_289074 107 17 G476S G476S NNP 10_1101-2020_09_09_289074 107 18 , , , 10_1101-2020_09_09_289074 107 19 detected detect VBN 10_1101-2020_09_09_289074 107 20 in in IN 10_1101-2020_09_09_289074 107 21 43 43 CD 10_1101-2020_09_09_289074 107 22 samples sample NNS 10_1101-2020_09_09_289074 107 23 ( ( -LRB- 10_1101-2020_09_09_289074 107 24 0.02 0.02 CD 10_1101-2020_09_09_289074 107 25 % % NN 10_1101-2020_09_09_289074 107 26 ) ) -RRB- 10_1101-2020_09_09_289074 107 27 , , , 10_1101-2020_09_09_289074 107 28 and and CC 10_1101-2020_09_09_289074 107 29 supported support VBN 10_1101-2020_09_09_289074 107 30 by by IN 10_1101-2020_09_09_289074 107 31 three three CD 10_1101-2020_09_09_289074 107 32 out out IN 10_1101-2020_09_09_289074 107 33 of of IN 10_1101-2020_09_09_289074 107 34 four four CD 10_1101-2020_09_09_289074 107 35 structural structural JJ 10_1101-2020_09_09_289074 107 36 models model NNS 10_1101-2020_09_09_289074 107 37 ( ( -LRB- 10_1101-2020_09_09_289074 107 38 Table table NN 10_1101-2020_09_09_289074 107 39 1 1 CD 10_1101-2020_09_09_289074 107 40 , , , 10_1101-2020_09_09_289074 107 41 Fig fig NN 10_1101-2020_09_09_289074 107 42 4 4 CD 10_1101-2020_09_09_289074 107 43 B b NN 10_1101-2020_09_09_289074 107 44 ) ) -RRB- 10_1101-2020_09_09_289074 107 45 . . . 10_1101-2020_09_09_289074 108 1 The the DT 10_1101-2020_09_09_289074 108 2 Glycine Glycine NNP 10_1101-2020_09_09_289074 108 3 ( ( -LRB- 10_1101-2020_09_09_289074 108 4 G G NNP 10_1101-2020_09_09_289074 108 5 ) ) -RRB- 10_1101-2020_09_09_289074 108 6 476 476 CD 10_1101-2020_09_09_289074 108 7 was be VBD 10_1101-2020_09_09_289074 108 8 included include VBN 10_1101-2020_09_09_289074 108 9 by by IN 10_1101-2020_09_09_289074 108 10 GBPM GBPM NNP 10_1101-2020_09_09_289074 108 11 analysis analysis NN 10_1101-2020_09_09_289074 108 12 in in IN 10_1101-2020_09_09_289074 108 13 Q2 Q2 NNP 10_1101-2020_09_09_289074 108 14 : : : 10_1101-2020_09_09_289074 108 15 its -PRON- PRP$ 10_1101-2020_09_09_289074 108 16 contribution contribution NN 10_1101-2020_09_09_289074 108 17 to to IN 10_1101-2020_09_09_289074 108 18 the the DT 10_1101-2020_09_09_289074 108 19 complex complex JJ 10_1101-2020_09_09_289074 108 20 stabilization stabilization NN 10_1101-2020_09_09_289074 108 21 is be VBZ 10_1101-2020_09_09_289074 108 22 weak weak JJ 10_1101-2020_09_09_289074 108 23 . . . 10_1101-2020_09_09_289074 109 1 Conversely conversely RB 10_1101-2020_09_09_289074 109 2 to to IN 10_1101-2020_09_09_289074 109 3 the the DT 10_1101-2020_09_09_289074 109 4 other other JJ 10_1101-2020_09_09_289074 109 5 mutation mutation NN 10_1101-2020_09_09_289074 109 6 described describe VBN 10_1101-2020_09_09_289074 109 7 here here RB 10_1101-2020_09_09_289074 109 8 , , , 10_1101-2020_09_09_289074 109 9 the the DT 10_1101-2020_09_09_289074 109 10 replacement replacement NN 10_1101-2020_09_09_289074 109 11 of of IN 10_1101-2020_09_09_289074 109 12 Glycine Glycine NNP 10_1101-2020_09_09_289074 109 13 476 476 CD 10_1101-2020_09_09_289074 109 14 with with IN 10_1101-2020_09_09_289074 109 15 a a DT 10_1101-2020_09_09_289074 109 16 Serine Serine NNP 10_1101-2020_09_09_289074 109 17 ( ( -LRB- 10_1101-2020_09_09_289074 109 18 S S NNP 10_1101-2020_09_09_289074 109 19 ) ) -RRB- 10_1101-2020_09_09_289074 109 20 could could MD 10_1101-2020_09_09_289074 109 21 have have VB 10_1101-2020_09_09_289074 109 22 more more RBR 10_1101-2020_09_09_289074 109 23 evident evident JJ 10_1101-2020_09_09_289074 109 24 effects effect NNS 10_1101-2020_09_09_289074 109 25 on on IN 10_1101-2020_09_09_289074 109 26 Spike Spike NNP 10_1101-2020_09_09_289074 109 27 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 109 28 molecular molecular JJ 10_1101-2020_09_09_289074 109 29 recognition recognition NN 10_1101-2020_09_09_289074 109 30 . . . 10_1101-2020_09_09_289074 110 1 In in IN 10_1101-2020_09_09_289074 110 2 fact fact NN 10_1101-2020_09_09_289074 110 3 , , , 10_1101-2020_09_09_289074 110 4 in in IN 10_1101-2020_09_09_289074 110 5 all all DT 10_1101-2020_09_09_289074 110 6 PDB PDB NNP 10_1101-2020_09_09_289074 110 7 entries entry NNS 10_1101-2020_09_09_289074 110 8 , , , 10_1101-2020_09_09_289074 110 9 the the DT 10_1101-2020_09_09_289074 110 10 alpha alpha NN 10_1101-2020_09_09_289074 110 11 carbon carbon NN 10_1101-2020_09_09_289074 110 12 of of IN 10_1101-2020_09_09_289074 110 13 this this DT 10_1101-2020_09_09_289074 110 14 Glycine Glycine NNP 10_1101-2020_09_09_289074 110 15 is be VBZ 10_1101-2020_09_09_289074 110 16 very very RB 10_1101-2020_09_09_289074 110 17 close close JJ 10_1101-2020_09_09_289074 110 18 , , , 10_1101-2020_09_09_289074 110 19 about about RB 10_1101-2020_09_09_289074 110 20 4 4 CD 10_1101-2020_09_09_289074 110 21 Å å NN 10_1101-2020_09_09_289074 110 22 , , , 10_1101-2020_09_09_289074 110 23 to to IN 10_1101-2020_09_09_289074 110 24 the the DT 10_1101-2020_09_09_289074 110 25 sidechain sidechain JJ 10_1101-2020_09_09_289074 110 26 amide amide NN 10_1101-2020_09_09_289074 110 27 group group NN 10_1101-2020_09_09_289074 110 28 of of IN 10_1101-2020_09_09_289074 110 29 the the DT 10_1101-2020_09_09_289074 110 30 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 110 31 Glutamine Glutamine NNP 10_1101-2020_09_09_289074 110 32 24 24 CD 10_1101-2020_09_09_289074 110 33 . . . 10_1101-2020_09_09_289074 111 1 Between between IN 10_1101-2020_09_09_289074 111 2 these these DT 10_1101-2020_09_09_289074 111 3 two two CD 10_1101-2020_09_09_289074 111 4 AAs aa NNS 10_1101-2020_09_09_289074 111 5 no no DT 10_1101-2020_09_09_289074 111 6 productive productive JJ 10_1101-2020_09_09_289074 111 7 interaction interaction NN 10_1101-2020_09_09_289074 111 8 can can MD 10_1101-2020_09_09_289074 111 9 be be VB 10_1101-2020_09_09_289074 111 10 established establish VBN 10_1101-2020_09_09_289074 111 11 but but CC 10_1101-2020_09_09_289074 111 12 the the DT 10_1101-2020_09_09_289074 111 13 substitution substitution NN 10_1101-2020_09_09_289074 111 14 of of IN 10_1101-2020_09_09_289074 111 15 the the DT 10_1101-2020_09_09_289074 111 16 Spike Spike NNP 10_1101-2020_09_09_289074 111 17 Glycine Glycine NNP 10_1101-2020_09_09_289074 111 18 with with IN 10_1101-2020_09_09_289074 111 19 a a DT 10_1101-2020_09_09_289074 111 20 Serine Serine NNP 10_1101-2020_09_09_289074 111 21 could could MD 10_1101-2020_09_09_289074 111 22 allow allow VB 10_1101-2020_09_09_289074 111 23 one one CD 10_1101-2020_09_09_289074 111 24 inter inter JJ 10_1101-2020_09_09_289074 111 25 - - JJ 10_1101-2020_09_09_289074 111 26 protein protein JJ 10_1101-2020_09_09_289074 111 27 hydrogen hydrogen NN 10_1101-2020_09_09_289074 111 28 bond bond NN 10_1101-2020_09_09_289074 111 29 to to IN 10_1101-2020_09_09_289074 111 30 .CC .CC : 10_1101-2020_09_09_289074 111 31 - - HYPH 10_1101-2020_09_09_289074 111 32 BY by IN 10_1101-2020_09_09_289074 111 33 - - HYPH 10_1101-2020_09_09_289074 111 34 NC NC NNP 10_1101-2020_09_09_289074 111 35 - - HYPH 10_1101-2020_09_09_289074 111 36 ND ND NNP 10_1101-2020_09_09_289074 111 37 4.0 4.0 CD 10_1101-2020_09_09_289074 111 38 International International NNP 10_1101-2020_09_09_289074 111 39 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 111 40 under under IN 10_1101-2020_09_09_289074 111 41 a a DT 10_1101-2020_09_09_289074 111 42 ( ( -LRB- 10_1101-2020_09_09_289074 111 43 which which WDT 10_1101-2020_09_09_289074 111 44 was be VBD 10_1101-2020_09_09_289074 111 45 not not RB 10_1101-2020_09_09_289074 111 46 certified certify VBN 10_1101-2020_09_09_289074 111 47 by by IN 10_1101-2020_09_09_289074 111 48 peer peer NN 10_1101-2020_09_09_289074 111 49 review review NN 10_1101-2020_09_09_289074 111 50 ) ) -RRB- 10_1101-2020_09_09_289074 111 51 is be VBZ 10_1101-2020_09_09_289074 111 52 the the DT 10_1101-2020_09_09_289074 111 53 author author NN 10_1101-2020_09_09_289074 111 54 / / SYM 10_1101-2020_09_09_289074 111 55 funder funder NN 10_1101-2020_09_09_289074 111 56 , , , 10_1101-2020_09_09_289074 111 57 who who WP 10_1101-2020_09_09_289074 111 58 has have VBZ 10_1101-2020_09_09_289074 111 59 granted grant VBN 10_1101-2020_09_09_289074 111 60 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 111 61 a a DT 10_1101-2020_09_09_289074 111 62 license license NN 10_1101-2020_09_09_289074 111 63 to to TO 10_1101-2020_09_09_289074 111 64 display display VB 10_1101-2020_09_09_289074 111 65 the the DT 10_1101-2020_09_09_289074 111 66 preprint preprint NN 10_1101-2020_09_09_289074 111 67 in in IN 10_1101-2020_09_09_289074 111 68 perpetuity perpetuity NN 10_1101-2020_09_09_289074 111 69 . . . 10_1101-2020_09_09_289074 112 1 It -PRON- PRP 10_1101-2020_09_09_289074 112 2 is be VBZ 10_1101-2020_09_09_289074 112 3 made make VBN 10_1101-2020_09_09_289074 112 4 The the DT 10_1101-2020_09_09_289074 112 5 copyright copyright NN 10_1101-2020_09_09_289074 112 6 holder holder NN 10_1101-2020_09_09_289074 112 7 for for IN 10_1101-2020_09_09_289074 112 8 this this DT 10_1101-2020_09_09_289074 112 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 112 10 version version NN 10_1101-2020_09_09_289074 112 11 posted post VBD 10_1101-2020_09_09_289074 112 12 January January NNP 10_1101-2020_09_09_289074 112 13 5 5 CD 10_1101-2020_09_09_289074 112 14 , , , 10_1101-2020_09_09_289074 112 15 2021 2021 CD 10_1101-2020_09_09_289074 112 16 . . . 10_1101-2020_09_09_289074 112 17 ; ; : 10_1101-2020_09_09_289074 112 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 112 19 : : : 10_1101-2020_09_09_289074 112 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 112 21 preprint preprint NN 10_1101-2020_09_09_289074 112 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 ADD 10_1101-2020_09_09_289074 112 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NN 10_1101-2020_09_09_289074 112 24 7 7 CD 10_1101-2020_09_09_289074 112 25 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 112 26 Glutamine Glutamine NNP 10_1101-2020_09_09_289074 112 27 24 24 CD 10_1101-2020_09_09_289074 112 28 . . . 10_1101-2020_09_09_289074 113 1 Moreover moreover RB 10_1101-2020_09_09_289074 113 2 , , , 10_1101-2020_09_09_289074 113 3 G476S G476S NNP 10_1101-2020_09_09_289074 113 4 could could MD 10_1101-2020_09_09_289074 113 5 establish establish VB 10_1101-2020_09_09_289074 113 6 the the DT 10_1101-2020_09_09_289074 113 7 same same JJ 10_1101-2020_09_09_289074 113 8 interaction interaction NN 10_1101-2020_09_09_289074 113 9 with with IN 10_1101-2020_09_09_289074 113 10 Spike Spike NNP 10_1101-2020_09_09_289074 113 11 Glutamine Glutamine NNP 10_1101-2020_09_09_289074 113 12 478 478 CD 10_1101-2020_09_09_289074 113 13 that that WDT 10_1101-2020_09_09_289074 113 14 could could MD 10_1101-2020_09_09_289074 113 15 stabilize stabilize VB 10_1101-2020_09_09_289074 113 16 the the DT 10_1101-2020_09_09_289074 113 17 conformation conformation NN 10_1101-2020_09_09_289074 113 18 of of IN 10_1101-2020_09_09_289074 113 19 a a DT 10_1101-2020_09_09_289074 113 20 random random JJ 10_1101-2020_09_09_289074 113 21 coil coil NN 10_1101-2020_09_09_289074 113 22 segment segment NN 10_1101-2020_09_09_289074 113 23 of of IN 10_1101-2020_09_09_289074 113 24 the the DT 10_1101-2020_09_09_289074 113 25 viral viral JJ 10_1101-2020_09_09_289074 113 26 protein protein NN 10_1101-2020_09_09_289074 113 27 resulting result VBG 10_1101-2020_09_09_289074 113 28 in in IN 10_1101-2020_09_09_289074 113 29 a a DT 10_1101-2020_09_09_289074 113 30 better well JJR 10_1101-2020_09_09_289074 113 31 pre pre NN 10_1101-2020_09_09_289074 113 32 - - NN 10_1101-2020_09_09_289074 113 33 organization organization NN 10_1101-2020_09_09_289074 113 34 to to IN 10_1101-2020_09_09_289074 113 35 the the DT 10_1101-2020_09_09_289074 113 36 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 113 37 recognition recognition NN 10_1101-2020_09_09_289074 113 38 ( ( -LRB- 10_1101-2020_09_09_289074 113 39 Figure figure NN 10_1101-2020_09_09_289074 113 40 S4 s4 NN 10_1101-2020_09_09_289074 113 41 ) ) -RRB- 10_1101-2020_09_09_289074 113 42 . . . 10_1101-2020_09_09_289074 114 1 Another another DT 10_1101-2020_09_09_289074 114 2 Spike Spike NNP 10_1101-2020_09_09_289074 114 3 residue residue NN 10_1101-2020_09_09_289074 114 4 , , , 10_1101-2020_09_09_289074 114 5 predicted predict VBN 10_1101-2020_09_09_289074 114 6 by by IN 10_1101-2020_09_09_289074 114 7 our -PRON- PRP$ 10_1101-2020_09_09_289074 114 8 analysis analysis NN 10_1101-2020_09_09_289074 114 9 for for IN 10_1101-2020_09_09_289074 114 10 playing play VBG 10_1101-2020_09_09_289074 114 11 a a DT 10_1101-2020_09_09_289074 114 12 relevant relevant JJ 10_1101-2020_09_09_289074 114 13 role role NN 10_1101-2020_09_09_289074 114 14 in in IN 10_1101-2020_09_09_289074 114 15 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 114 16 recognition recognition NN 10_1101-2020_09_09_289074 114 17 , , , 10_1101-2020_09_09_289074 114 18 is be VBZ 10_1101-2020_09_09_289074 114 19 the the DT 10_1101-2020_09_09_289074 114 20 Glutamine Glutamine NNP 10_1101-2020_09_09_289074 114 21 493 493 CD 10_1101-2020_09_09_289074 114 22 ( ( -LRB- 10_1101-2020_09_09_289074 114 23 Table table NN 10_1101-2020_09_09_289074 114 24 1 1 CD 10_1101-2020_09_09_289074 114 25 ) ) -RRB- 10_1101-2020_09_09_289074 114 26 . . . 10_1101-2020_09_09_289074 115 1 The the DT 10_1101-2020_09_09_289074 115 2 GISAID GISAID NNP 10_1101-2020_09_09_289074 115 3 data datum NNS 10_1101-2020_09_09_289074 115 4 revealed reveal VBD 10_1101-2020_09_09_289074 115 5 that that IN 10_1101-2020_09_09_289074 115 6 such such PDT 10_1101-2020_09_09_289074 115 7 an an DT 10_1101-2020_09_09_289074 115 8 aminoacid aminoacid NN 10_1101-2020_09_09_289074 115 9 is be VBZ 10_1101-2020_09_09_289074 115 10 rarely rarely RB 10_1101-2020_09_09_289074 115 11 replaced replace VBN 10_1101-2020_09_09_289074 115 12 by by IN 10_1101-2020_09_09_289074 115 13 a a DT 10_1101-2020_09_09_289074 115 14 Leucine Leucine NNP 10_1101-2020_09_09_289074 115 15 ( ( -LRB- 10_1101-2020_09_09_289074 115 16 Q493L q493l NN 10_1101-2020_09_09_289074 115 17 ) ) -RRB- 10_1101-2020_09_09_289074 115 18 or or CC 10_1101-2020_09_09_289074 115 19 by by IN 10_1101-2020_09_09_289074 115 20 an an DT 10_1101-2020_09_09_289074 115 21 Arginine Arginine NNP 10_1101-2020_09_09_289074 115 22 ( ( -LRB- 10_1101-2020_09_09_289074 115 23 Q493R Q493R NNP 10_1101-2020_09_09_289074 115 24 ) ) -RRB- 10_1101-2020_09_09_289074 115 25 . . . 10_1101-2020_09_09_289074 116 1 These these DT 10_1101-2020_09_09_289074 116 2 mutations mutation NNS 10_1101-2020_09_09_289074 116 3 could could MD 10_1101-2020_09_09_289074 116 4 affect affect VB 10_1101-2020_09_09_289074 116 5 the the DT 10_1101-2020_09_09_289074 116 6 recognition recognition NN 10_1101-2020_09_09_289074 116 7 of of IN 10_1101-2020_09_09_289074 116 8 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 116 9 in in IN 10_1101-2020_09_09_289074 116 10 an an DT 10_1101-2020_09_09_289074 116 11 opposite opposite JJ 10_1101-2020_09_09_289074 116 12 way way NN 10_1101-2020_09_09_289074 116 13 . . . 10_1101-2020_09_09_289074 117 1 Spike Spike NNP 10_1101-2020_09_09_289074 117 2 Glutamine Glutamine NNP 10_1101-2020_09_09_289074 117 3 493 493 CD 10_1101-2020_09_09_289074 117 4 is be VBZ 10_1101-2020_09_09_289074 117 5 involved involve VBN 10_1101-2020_09_09_289074 117 6 in in IN 10_1101-2020_09_09_289074 117 7 hydrogen hydrogen NN 10_1101-2020_09_09_289074 117 8 bond bond NN 10_1101-2020_09_09_289074 117 9 with with IN 10_1101-2020_09_09_289074 117 10 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 117 11 Glutamate Glutamate NNP 10_1101-2020_09_09_289074 117 12 35 35 CD 10_1101-2020_09_09_289074 117 13 . . . 10_1101-2020_09_09_289074 118 1 The the DT 10_1101-2020_09_09_289074 118 2 mutation mutation NN 10_1101-2020_09_09_289074 118 3 Q493L Q493L NNP 10_1101-2020_09_09_289074 118 4 can can MD 10_1101-2020_09_09_289074 118 5 not not RB 10_1101-2020_09_09_289074 118 6 establish establish VB 10_1101-2020_09_09_289074 118 7 such such PDT 10_1101-2020_09_09_289074 118 8 a a DT 10_1101-2020_09_09_289074 118 9 productive productive JJ 10_1101-2020_09_09_289074 118 10 contribution contribution NN 10_1101-2020_09_09_289074 118 11 and and CC 10_1101-2020_09_09_289074 118 12 could could MD 10_1101-2020_09_09_289074 118 13 only only RB 10_1101-2020_09_09_289074 118 14 hydrophobically hydrophobically RB 10_1101-2020_09_09_289074 118 15 interact interact VB 10_1101-2020_09_09_289074 118 16 to to IN 10_1101-2020_09_09_289074 118 17 Spike Spike NNP 10_1101-2020_09_09_289074 118 18 Leucine Leucine NNP 10_1101-2020_09_09_289074 118 19 455 455 CD 10_1101-2020_09_09_289074 118 20 . . . 10_1101-2020_09_09_289074 119 1 Conversely conversely RB 10_1101-2020_09_09_289074 119 2 , , , 10_1101-2020_09_09_289074 119 3 Q493R Q493R NNP 10_1101-2020_09_09_289074 119 4 could could MD 10_1101-2020_09_09_289074 119 5 locate locate VB 10_1101-2020_09_09_289074 119 6 its -PRON- PRP$ 10_1101-2020_09_09_289074 119 7 net net NN 10_1101-2020_09_09_289074 119 8 positively positively RB 10_1101-2020_09_09_289074 119 9 charged charge VBN 10_1101-2020_09_09_289074 119 10 sidechain sidechain NN 10_1101-2020_09_09_289074 119 11 into into IN 10_1101-2020_09_09_289074 119 12 an an DT 10_1101-2020_09_09_289074 119 13 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 119 14 pocket pocket NN 10_1101-2020_09_09_289074 119 15 delimited delimit VBN 10_1101-2020_09_09_289074 119 16 by by IN 10_1101-2020_09_09_289074 119 17 Aspartate Aspartate NNP 10_1101-2020_09_09_289074 119 18 30 30 CD 10_1101-2020_09_09_289074 119 19 , , , 10_1101-2020_09_09_289074 119 20 Histidine Histidine NNP 10_1101-2020_09_09_289074 119 21 34 34 CD 10_1101-2020_09_09_289074 119 22 and and CC 10_1101-2020_09_09_289074 119 23 Glutamate Glutamate NNP 10_1101-2020_09_09_289074 119 24 35 35 CD 10_1101-2020_09_09_289074 119 25 . . . 10_1101-2020_09_09_289074 120 1 Such such PDT 10_1101-2020_09_09_289074 120 2 a a DT 10_1101-2020_09_09_289074 120 3 positioning positioning NN 10_1101-2020_09_09_289074 120 4 could could MD 10_1101-2020_09_09_289074 120 5 produce produce VB 10_1101-2020_09_09_289074 120 6 a a DT 10_1101-2020_09_09_289074 120 7 remarkable remarkable JJ 10_1101-2020_09_09_289074 120 8 electrostatic electrostatic JJ 10_1101-2020_09_09_289074 120 9 stabilization stabilization NN 10_1101-2020_09_09_289074 120 10 of of IN 10_1101-2020_09_09_289074 120 11 the the DT 10_1101-2020_09_09_289074 120 12 complex complex JJ 10_1101-2020_09_09_289074 120 13 ( ( -LRB- 10_1101-2020_09_09_289074 120 14 Figure figure NN 10_1101-2020_09_09_289074 120 15 S5 s5 NN 10_1101-2020_09_09_289074 120 16 ) ) -RRB- 10_1101-2020_09_09_289074 120 17 . . . 10_1101-2020_09_09_289074 121 1 In in IN 10_1101-2020_09_09_289074 121 2 general general JJ 10_1101-2020_09_09_289074 121 3 , , , 10_1101-2020_09_09_289074 121 4 we -PRON- PRP 10_1101-2020_09_09_289074 121 5 could could MD 10_1101-2020_09_09_289074 121 6 observe observe VB 10_1101-2020_09_09_289074 121 7 that that IN 10_1101-2020_09_09_289074 121 8 AAs AAs NNP 10_1101-2020_09_09_289074 121 9 with with IN 10_1101-2020_09_09_289074 121 10 the the DT 10_1101-2020_09_09_289074 121 11 strongest strong JJS 10_1101-2020_09_09_289074 121 12 evidence evidence NN 10_1101-2020_09_09_289074 121 13 for for IN 10_1101-2020_09_09_289074 121 14 interaction interaction NN 10_1101-2020_09_09_289074 121 15 contribution contribution NN 10_1101-2020_09_09_289074 121 16 in in IN 10_1101-2020_09_09_289074 121 17 the the DT 10_1101-2020_09_09_289074 121 18 Spike Spike NNP 10_1101-2020_09_09_289074 121 19 / / SYM 10_1101-2020_09_09_289074 121 20 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 121 21 interface interface NN 10_1101-2020_09_09_289074 121 22 tend tend VBP 10_1101-2020_09_09_289074 121 23 not not RB 10_1101-2020_09_09_289074 121 24 to to TO 10_1101-2020_09_09_289074 121 25 diverge diverge VB 10_1101-2020_09_09_289074 121 26 from from IN 10_1101-2020_09_09_289074 121 27 the the DT 10_1101-2020_09_09_289074 121 28 reference reference NN 10_1101-2020_09_09_289074 121 29 ( ( -LRB- 10_1101-2020_09_09_289074 121 30 Fig fig NN 10_1101-2020_09_09_289074 121 31 4 4 CD 10_1101-2020_09_09_289074 121 32 B b NN 10_1101-2020_09_09_289074 121 33 ) ) -RRB- 10_1101-2020_09_09_289074 121 34 , , , 10_1101-2020_09_09_289074 121 35 which which WDT 10_1101-2020_09_09_289074 121 36 may may MD 10_1101-2020_09_09_289074 121 37 indicate indicate VB 10_1101-2020_09_09_289074 121 38 a a DT 10_1101-2020_09_09_289074 121 39 solid solid JJ 10_1101-2020_09_09_289074 121 40 evolutionary evolutionary JJ 10_1101-2020_09_09_289074 121 41 constraint constraint NN 10_1101-2020_09_09_289074 121 42 to to TO 10_1101-2020_09_09_289074 121 43 maintain maintain VB 10_1101-2020_09_09_289074 121 44 the the DT 10_1101-2020_09_09_289074 121 45 interface interface NN 10_1101-2020_09_09_289074 121 46 residues residue NNS 10_1101-2020_09_09_289074 121 47 unchanged unchanged JJ 10_1101-2020_09_09_289074 121 48 . . . 10_1101-2020_09_09_289074 122 1 For for IN 10_1101-2020_09_09_289074 122 2 example example NN 10_1101-2020_09_09_289074 122 3 , , , 10_1101-2020_09_09_289074 122 4 one one CD 10_1101-2020_09_09_289074 122 5 of of IN 10_1101-2020_09_09_289074 122 6 the the DT 10_1101-2020_09_09_289074 122 7 most most RBS 10_1101-2020_09_09_289074 122 8 relevant relevant JJ 10_1101-2020_09_09_289074 122 9 1st 1st NNP 10_1101-2020_09_09_289074 122 10 quartile quartile NNP 10_1101-2020_09_09_289074 122 11 AA AA NNP 10_1101-2020_09_09_289074 122 12 in in IN 10_1101-2020_09_09_289074 122 13 the the DT 10_1101-2020_09_09_289074 122 14 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 122 15 / / SYM 10_1101-2020_09_09_289074 122 16 Spike Spike NNP 10_1101-2020_09_09_289074 122 17 interaction interaction NN 10_1101-2020_09_09_289074 122 18 , , , 10_1101-2020_09_09_289074 122 19 Glutamine Glutamine NNP 10_1101-2020_09_09_289074 122 20 ( ( -LRB- 10_1101-2020_09_09_289074 122 21 Q Q NNP 10_1101-2020_09_09_289074 122 22 ) ) -RRB- 10_1101-2020_09_09_289074 122 23 493 493 CD 10_1101-2020_09_09_289074 122 24 , , , 10_1101-2020_09_09_289074 122 25 is be VBZ 10_1101-2020_09_09_289074 122 26 rarely rarely RB 10_1101-2020_09_09_289074 122 27 mutated mutate VBN 10_1101-2020_09_09_289074 122 28 , , , 10_1101-2020_09_09_289074 122 29 with with IN 10_1101-2020_09_09_289074 122 30 12 12 CD 10_1101-2020_09_09_289074 122 31 cases case NNS 10_1101-2020_09_09_289074 122 32 of of IN 10_1101-2020_09_09_289074 122 33 Q493L Q493L NNP 10_1101-2020_09_09_289074 122 34 , , , 10_1101-2020_09_09_289074 122 35 4 4 CD 10_1101-2020_09_09_289074 122 36 of of IN 10_1101-2020_09_09_289074 122 37 Q493 q493 NN 10_1101-2020_09_09_289074 122 38 * * NFP 10_1101-2020_09_09_289074 122 39 ( ( -LRB- 10_1101-2020_09_09_289074 122 40 the the DT 10_1101-2020_09_09_289074 122 41 substitution substitution NN 10_1101-2020_09_09_289074 122 42 of of IN 10_1101-2020_09_09_289074 122 43 Q493 Q493 NNP 10_1101-2020_09_09_289074 122 44 with with IN 10_1101-2020_09_09_289074 122 45 a a DT 10_1101-2020_09_09_289074 122 46 stop stop NN 10_1101-2020_09_09_289074 122 47 codon codon NN 10_1101-2020_09_09_289074 122 48 ) ) -RRB- 10_1101-2020_09_09_289074 122 49 , , , 10_1101-2020_09_09_289074 122 50 3 3 CD 10_1101-2020_09_09_289074 122 51 of of IN 10_1101-2020_09_09_289074 122 52 Q493 Q493 NNP 10_1101-2020_09_09_289074 122 53 K K NNP 10_1101-2020_09_09_289074 122 54 , , , 10_1101-2020_09_09_289074 122 55 and and CC 10_1101-2020_09_09_289074 122 56 1 1 CD 10_1101-2020_09_09_289074 122 57 of of IN 10_1101-2020_09_09_289074 122 58 Q493R Q493R NNP 10_1101-2020_09_09_289074 122 59 and and CC 10_1101-2020_09_09_289074 122 60 Q493H. Q493H. NNP 10_1101-2020_09_09_289074 123 1 One one CD 10_1101-2020_09_09_289074 123 2 possible possible JJ 10_1101-2020_09_09_289074 123 3 exception exception NN 10_1101-2020_09_09_289074 123 4 is be VBZ 10_1101-2020_09_09_289074 123 5 the the DT 10_1101-2020_09_09_289074 123 6 aforementioned aforementioned JJ 10_1101-2020_09_09_289074 123 7 Spike Spike NNP 10_1101-2020_09_09_289074 123 8 mutation mutation NN 10_1101-2020_09_09_289074 123 9 N501Y n501y CD 10_1101-2020_09_09_289074 123 10 , , , 10_1101-2020_09_09_289074 123 11 located locate VBN 10_1101-2020_09_09_289074 123 12 in in IN 10_1101-2020_09_09_289074 123 13 the the DT 10_1101-2020_09_09_289074 123 14 strongest strong JJS 10_1101-2020_09_09_289074 123 15 1st 1st NN 10_1101-2020_09_09_289074 123 16 quartile quartile NNP 10_1101-2020_09_09_289074 123 17 GBPM GBPM NNP 10_1101-2020_09_09_289074 123 18 - - HYPH 10_1101-2020_09_09_289074 123 19 predicted predict VBN 10_1101-2020_09_09_289074 123 20 AA AA NNP 10_1101-2020_09_09_289074 123 21 for for IN 10_1101-2020_09_09_289074 123 22 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 123 23 binding binding NN 10_1101-2020_09_09_289074 123 24 , , , 10_1101-2020_09_09_289074 123 25 which which WDT 10_1101-2020_09_09_289074 123 26 was be VBD 10_1101-2020_09_09_289074 123 27 found find VBN 10_1101-2020_09_09_289074 123 28 in in IN 10_1101-2020_09_09_289074 123 29 the the DT 10_1101-2020_09_09_289074 123 30 considerable considerable JJ 10_1101-2020_09_09_289074 123 31 number number NN 10_1101-2020_09_09_289074 123 32 of of IN 10_1101-2020_09_09_289074 123 33 4921 4921 CD 10_1101-2020_09_09_289074 123 34 different different JJ 10_1101-2020_09_09_289074 123 35 patients patient NNS 10_1101-2020_09_09_289074 123 36 . . . 10_1101-2020_09_09_289074 124 1 Mutational mutational JJ 10_1101-2020_09_09_289074 124 2 analysis analysis NN 10_1101-2020_09_09_289074 124 3 of of IN 10_1101-2020_09_09_289074 124 4 human human JJ 10_1101-2020_09_09_289074 124 5 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 124 6 We -PRON- PRP 10_1101-2020_09_09_289074 124 7 also also RB 10_1101-2020_09_09_289074 124 8 investigated investigate VBD 10_1101-2020_09_09_289074 124 9 the the DT 10_1101-2020_09_09_289074 124 10 variants variant NNS 10_1101-2020_09_09_289074 124 11 of of IN 10_1101-2020_09_09_289074 124 12 human human JJ 10_1101-2020_09_09_289074 124 13 ACE2 ACE2 NNS 10_1101-2020_09_09_289074 124 14 , , , 10_1101-2020_09_09_289074 124 15 since since IN 10_1101-2020_09_09_289074 124 16 these these DT 10_1101-2020_09_09_289074 124 17 could could MD 10_1101-2020_09_09_289074 124 18 constitute constitute VB 10_1101-2020_09_09_289074 124 19 the the DT 10_1101-2020_09_09_289074 124 20 basis basis NN 10_1101-2020_09_09_289074 124 21 for for IN 10_1101-2020_09_09_289074 124 22 patient- patient- NNP 10_1101-2020_09_09_289074 124 23 specific specific JJ 10_1101-2020_09_09_289074 124 24 COVID-19 covid-19 JJ 10_1101-2020_09_09_289074 124 25 susceptibility susceptibility NN 10_1101-2020_09_09_289074 124 26 and and CC 10_1101-2020_09_09_289074 124 27 severity severity NN 10_1101-2020_09_09_289074 124 28 . . . 10_1101-2020_09_09_289074 125 1 ACE2 ace2 JJ 10_1101-2020_09_09_289074 125 2 protein protein NN 10_1101-2020_09_09_289074 125 3 sequence sequence NN 10_1101-2020_09_09_289074 125 4 is be VBZ 10_1101-2020_09_09_289074 125 5 highly highly RB 10_1101-2020_09_09_289074 125 6 conserved conserve VBN 10_1101-2020_09_09_289074 125 7 across across IN 10_1101-2020_09_09_289074 125 8 vertebrates vertebrate NNS 10_1101-2020_09_09_289074 125 9 ( ( -LRB- 10_1101-2020_09_09_289074 125 10 33 33 CD 10_1101-2020_09_09_289074 125 11 ) ) -RRB- 10_1101-2020_09_09_289074 125 12 and and CC 10_1101-2020_09_09_289074 125 13 also also RB 10_1101-2020_09_09_289074 125 14 within within IN 10_1101-2020_09_09_289074 125 15 the the DT 10_1101-2020_09_09_289074 125 16 human human JJ 10_1101-2020_09_09_289074 125 17 species specie NNS 10_1101-2020_09_09_289074 125 18 ( ( -LRB- 10_1101-2020_09_09_289074 125 19 34 34 CD 10_1101-2020_09_09_289074 125 20 ) ) -RRB- 10_1101-2020_09_09_289074 125 21 , , , 10_1101-2020_09_09_289074 125 22 with with IN 10_1101-2020_09_09_289074 125 23 the the DT 10_1101-2020_09_09_289074 125 24 most most RBS 10_1101-2020_09_09_289074 125 25 frequent frequent JJ 10_1101-2020_09_09_289074 125 26 missense missense NN 10_1101-2020_09_09_289074 125 27 mutation mutation NN 10_1101-2020_09_09_289074 125 28 ( ( -LRB- 10_1101-2020_09_09_289074 125 29 rs41303171 rs41303171 FW 10_1101-2020_09_09_289074 125 30 , , , 10_1101-2020_09_09_289074 125 31 N720D n720d ADD 10_1101-2020_09_09_289074 125 32 ) ) -RRB- 10_1101-2020_09_09_289074 125 33 present present JJ 10_1101-2020_09_09_289074 125 34 in in IN 10_1101-2020_09_09_289074 125 35 1.5 1.5 CD 10_1101-2020_09_09_289074 125 36 % % NN 10_1101-2020_09_09_289074 125 37 of of IN 10_1101-2020_09_09_289074 125 38 the the DT 10_1101-2020_09_09_289074 125 39 world world NN 10_1101-2020_09_09_289074 125 40 population population NN 10_1101-2020_09_09_289074 125 41 ( ( -LRB- 10_1101-2020_09_09_289074 125 42 Supplementary Supplementary NNP 10_1101-2020_09_09_289074 125 43 File File NNP 10_1101-2020_09_09_289074 125 44 2 2 CD 10_1101-2020_09_09_289074 125 45 ) ) -RRB- 10_1101-2020_09_09_289074 125 46 . . . 10_1101-2020_09_09_289074 126 1 Our -PRON- PRP$ 10_1101-2020_09_09_289074 126 2 analysis analysis NN 10_1101-2020_09_09_289074 126 3 shows show VBZ 10_1101-2020_09_09_289074 126 4 that that IN 10_1101-2020_09_09_289074 126 5 only only RB 10_1101-2020_09_09_289074 126 6 5 5 CD 10_1101-2020_09_09_289074 126 7 variants variant NNS 10_1101-2020_09_09_289074 126 8 of of IN 10_1101-2020_09_09_289074 126 9 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 126 10 detected detect VBN 10_1101-2020_09_09_289074 126 11 in in IN 10_1101-2020_09_09_289074 126 12 the the DT 10_1101-2020_09_09_289074 126 13 human human JJ 10_1101-2020_09_09_289074 126 14 population population NN 10_1101-2020_09_09_289074 126 15 are be VBP 10_1101-2020_09_09_289074 126 16 also also RB 10_1101-2020_09_09_289074 126 17 located locate VBN 10_1101-2020_09_09_289074 126 18 in in IN 10_1101-2020_09_09_289074 126 19 the the DT 10_1101-2020_09_09_289074 126 20 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 126 21 / / SYM 10_1101-2020_09_09_289074 126 22 Spike Spike NNP 10_1101-2020_09_09_289074 126 23 direct direct JJ 10_1101-2020_09_09_289074 126 24 binding bind VBG 10_1101-2020_09_09_289074 126 25 interface interface NN 10_1101-2020_09_09_289074 126 26 ( ( -LRB- 10_1101-2020_09_09_289074 126 27 Table table NN 10_1101-2020_09_09_289074 126 28 5 5 CD 10_1101-2020_09_09_289074 126 29 and and CC 10_1101-2020_09_09_289074 126 30 Fig Fig NNP 10_1101-2020_09_09_289074 126 31 5 5 CD 10_1101-2020_09_09_289074 126 32 ) ) -RRB- 10_1101-2020_09_09_289074 126 33 . . . 10_1101-2020_09_09_289074 127 1 Of of IN 10_1101-2020_09_09_289074 127 2 these these DT 10_1101-2020_09_09_289074 127 3 , , , 10_1101-2020_09_09_289074 127 4 rs73635825 rs73635825 NNP 10_1101-2020_09_09_289074 127 5 ( ( -LRB- 10_1101-2020_09_09_289074 127 6 causing cause VBG 10_1101-2020_09_09_289074 127 7 a a DT 10_1101-2020_09_09_289074 127 8 S19P s19p NN 10_1101-2020_09_09_289074 127 9 AA AA NNP 10_1101-2020_09_09_289074 127 10 variant variant NN 10_1101-2020_09_09_289074 127 11 ) ) -RRB- 10_1101-2020_09_09_289074 127 12 is be VBZ 10_1101-2020_09_09_289074 127 13 both both CC 10_1101-2020_09_09_289074 127 14 the the DT 10_1101-2020_09_09_289074 127 15 most most RBS 10_1101-2020_09_09_289074 127 16 frequent frequent JJ 10_1101-2020_09_09_289074 127 17 in in IN 10_1101-2020_09_09_289074 127 18 the the DT 10_1101-2020_09_09_289074 127 19 population population NN 10_1101-2020_09_09_289074 127 20 ( ( -LRB- 10_1101-2020_09_09_289074 127 21 0.06 0.06 CD 10_1101-2020_09_09_289074 127 22 % % NN 10_1101-2020_09_09_289074 127 23 ) ) -RRB- 10_1101-2020_09_09_289074 127 24 and and CC 10_1101-2020_09_09_289074 127 25 the the DT 10_1101-2020_09_09_289074 127 26 most most RBS 10_1101-2020_09_09_289074 127 27 relevant relevant JJ 10_1101-2020_09_09_289074 127 28 in in IN 10_1101-2020_09_09_289074 127 29 the the DT 10_1101-2020_09_09_289074 127 30 interaction interaction NN 10_1101-2020_09_09_289074 127 31 with with IN 10_1101-2020_09_09_289074 127 32 the the DT 10_1101-2020_09_09_289074 127 33 viral viral JJ 10_1101-2020_09_09_289074 127 34 protein protein NN 10_1101-2020_09_09_289074 127 35 , , , 10_1101-2020_09_09_289074 127 36 with with IN 10_1101-2020_09_09_289074 127 37 a a DT 10_1101-2020_09_09_289074 127 38 GBPM GBPM NNP 10_1101-2020_09_09_289074 127 39 score score NN 10_1101-2020_09_09_289074 127 40 of of IN 10_1101-2020_09_09_289074 127 41 -47.6175 -47.6175 NN 10_1101-2020_09_09_289074 127 42 ( ( -LRB- 10_1101-2020_09_09_289074 127 43 Q1 Q1 NNP 10_1101-2020_09_09_289074 127 44 ) ) -RRB- 10_1101-2020_09_09_289074 127 45 and and CC 10_1101-2020_09_09_289074 127 46 support support NN 10_1101-2020_09_09_289074 127 47 from from IN 10_1101-2020_09_09_289074 127 48 all all DT 10_1101-2020_09_09_289074 127 49 4 4 CD 10_1101-2020_09_09_289074 127 50 models model NNS 10_1101-2020_09_09_289074 127 51 ( ( -LRB- 10_1101-2020_09_09_289074 127 52 Table table NN 10_1101-2020_09_09_289074 127 53 2 2 CD 10_1101-2020_09_09_289074 127 54 ) ) -RRB- 10_1101-2020_09_09_289074 127 55 . . . 10_1101-2020_09_09_289074 128 1 The the DT 10_1101-2020_09_09_289074 128 2 rs73635825 rs73635825 NNP 10_1101-2020_09_09_289074 128 3 SNP SNP NNP 10_1101-2020_09_09_289074 128 4 frequency frequency NN 10_1101-2020_09_09_289074 128 5 is be VBZ 10_1101-2020_09_09_289074 128 6 higher high JJR 10_1101-2020_09_09_289074 128 7 in in IN 10_1101-2020_09_09_289074 128 8 the the DT 10_1101-2020_09_09_289074 128 9 population population NN 10_1101-2020_09_09_289074 128 10 of of IN 10_1101-2020_09_09_289074 128 11 African african JJ 10_1101-2020_09_09_289074 128 12 descent descent NN 10_1101-2020_09_09_289074 128 13 ( ( -LRB- 10_1101-2020_09_09_289074 128 14 0.2 0.2 CD 10_1101-2020_09_09_289074 128 15 % % NN 10_1101-2020_09_09_289074 128 16 ) ) -RRB- 10_1101-2020_09_09_289074 128 17 . . . 10_1101-2020_09_09_289074 129 1 The the DT 10_1101-2020_09_09_289074 129 2 second second JJ 10_1101-2020_09_09_289074 129 3 SNP SNP NNP 10_1101-2020_09_09_289074 129 4 , , , 10_1101-2020_09_09_289074 129 5 rs143936283 rs143936283 FW 10_1101-2020_09_09_289074 129 6 ( ( -LRB- 10_1101-2020_09_09_289074 129 7 E329 E329 NNP 10_1101-2020_09_09_289074 129 8 G g NN 10_1101-2020_09_09_289074 129 9 , , , 10_1101-2020_09_09_289074 129 10 Table table NN 10_1101-2020_09_09_289074 129 11 5 5 CD 10_1101-2020_09_09_289074 129 12 ) ) -RRB- 10_1101-2020_09_09_289074 129 13 is be VBZ 10_1101-2020_09_09_289074 129 14 a a DT 10_1101-2020_09_09_289074 129 15 very very RB 10_1101-2020_09_09_289074 129 16 rare rare JJ 10_1101-2020_09_09_289074 129 17 allele allele NN 10_1101-2020_09_09_289074 129 18 ( ( -LRB- 10_1101-2020_09_09_289074 129 19 0.0066 0.0066 CD 10_1101-2020_09_09_289074 129 20 % % NN 10_1101-2020_09_09_289074 129 21 ) ) -RRB- 10_1101-2020_09_09_289074 129 22 in in IN 10_1101-2020_09_09_289074 129 23 the the DT 10_1101-2020_09_09_289074 129 24 European european JJ 10_1101-2020_09_09_289074 129 25 ( ( -LRB- 10_1101-2020_09_09_289074 129 26 non non JJ 10_1101-2020_09_09_289074 129 27 - - JJ 10_1101-2020_09_09_289074 129 28 Finnish finnish JJ 10_1101-2020_09_09_289074 129 29 ) ) -RRB- 10_1101-2020_09_09_289074 129 30 Asian asian JJ 10_1101-2020_09_09_289074 129 31 population population NN 10_1101-2020_09_09_289074 129 32 . . . 10_1101-2020_09_09_289074 130 1 The the DT 10_1101-2020_09_09_289074 130 2 rs766996587 rs766996587 NNP 10_1101-2020_09_09_289074 130 3 ( ( -LRB- 10_1101-2020_09_09_289074 130 4 M82I M82I NNP 10_1101-2020_09_09_289074 130 5 ) ) -RRB- 10_1101-2020_09_09_289074 130 6 SNP SNP NNP 10_1101-2020_09_09_289074 130 7 is be VBZ 10_1101-2020_09_09_289074 130 8 also also RB 10_1101-2020_09_09_289074 130 9 a a DT 10_1101-2020_09_09_289074 130 10 very very RB 10_1101-2020_09_09_289074 130 11 rare rare JJ 10_1101-2020_09_09_289074 130 12 allele allele NN 10_1101-2020_09_09_289074 130 13 ( ( -LRB- 10_1101-2020_09_09_289074 130 14 0.0066 0.0066 CD 10_1101-2020_09_09_289074 130 15 % % NN 10_1101-2020_09_09_289074 130 16 ) ) -RRB- 10_1101-2020_09_09_289074 130 17 found find VBN 10_1101-2020_09_09_289074 130 18 in in IN 10_1101-2020_09_09_289074 130 19 the the DT 10_1101-2020_09_09_289074 130 20 African african JJ 10_1101-2020_09_09_289074 130 21 population population NN 10_1101-2020_09_09_289074 130 22 . . . 10_1101-2020_09_09_289074 131 1 E37 E37 NNP 10_1101-2020_09_09_289074 131 2 K K NNP 10_1101-2020_09_09_289074 131 3 ( ( -LRB- 10_1101-2020_09_09_289074 131 4 rs146676783 rs146676783 NNP 10_1101-2020_09_09_289074 131 5 ) ) -RRB- 10_1101-2020_09_09_289074 131 6 is be VBZ 10_1101-2020_09_09_289074 131 7 more more RBR 10_1101-2020_09_09_289074 131 8 frequent frequent JJ 10_1101-2020_09_09_289074 131 9 in in IN 10_1101-2020_09_09_289074 131 10 the the DT 10_1101-2020_09_09_289074 131 11 Finnish finnish JJ 10_1101-2020_09_09_289074 131 12 ( ( -LRB- 10_1101-2020_09_09_289074 131 13 0.03 0.03 CD 10_1101-2020_09_09_289074 131 14 % % NN 10_1101-2020_09_09_289074 131 15 ) ) -RRB- 10_1101-2020_09_09_289074 131 16 and and CC 10_1101-2020_09_09_289074 131 17 G352V G352V NNP 10_1101-2020_09_09_289074 131 18 ( ( -LRB- 10_1101-2020_09_09_289074 131 19 rs370610075 rs370610075 NNP 10_1101-2020_09_09_289074 131 20 ) ) -RRB- 10_1101-2020_09_09_289074 131 21 in in IN 10_1101-2020_09_09_289074 131 22 the the DT 10_1101-2020_09_09_289074 131 23 European european JJ 10_1101-2020_09_09_289074 131 24 non non JJ 10_1101-2020_09_09_289074 131 25 - - JJ 10_1101-2020_09_09_289074 131 26 Finnish finnish JJ 10_1101-2020_09_09_289074 131 27 ( ( -LRB- 10_1101-2020_09_09_289074 131 28 0 0 NFP 10_1101-2020_09_09_289074 131 29 . . . 10_1101-2020_09_09_289074 132 1 007 007 CD 10_1101-2020_09_09_289074 132 2 % % NN 10_1101-2020_09_09_289074 132 3 ) ) -RRB- 10_1101-2020_09_09_289074 132 4 population population NN 10_1101-2020_09_09_289074 132 5 . . . 10_1101-2020_09_09_289074 133 1 None none NN 10_1101-2020_09_09_289074 133 2 of of IN 10_1101-2020_09_09_289074 133 3 these these DT 10_1101-2020_09_09_289074 133 4 five five CD 10_1101-2020_09_09_289074 133 5 SNPs snp NNS 10_1101-2020_09_09_289074 133 6 have have VBP 10_1101-2020_09_09_289074 133 7 a a DT 10_1101-2020_09_09_289074 133 8 reported report VBN 10_1101-2020_09_09_289074 133 9 clinical clinical JJ 10_1101-2020_09_09_289074 133 10 significance significance NN 10_1101-2020_09_09_289074 133 11 , , , 10_1101-2020_09_09_289074 133 12 according accord VBG 10_1101-2020_09_09_289074 133 13 to to IN 10_1101-2020_09_09_289074 133 14 dbSNP dbsnp NN 10_1101-2020_09_09_289074 133 15 and and CC 10_1101-2020_09_09_289074 133 16 literature literature NN 10_1101-2020_09_09_289074 133 17 search search NN 10_1101-2020_09_09_289074 133 18 ( ( -LRB- 10_1101-2020_09_09_289074 133 19 35 35 CD 10_1101-2020_09_09_289074 133 20 ) ) -RRB- 10_1101-2020_09_09_289074 133 21 . . . 10_1101-2020_09_09_289074 134 1 It -PRON- PRP 10_1101-2020_09_09_289074 134 2 must must MD 10_1101-2020_09_09_289074 134 3 be be VB 10_1101-2020_09_09_289074 134 4 mentioned mention VBN 10_1101-2020_09_09_289074 134 5 that that IN 10_1101-2020_09_09_289074 134 6 M82I M82I NNP 10_1101-2020_09_09_289074 134 7 , , , 10_1101-2020_09_09_289074 134 8 together together RB 10_1101-2020_09_09_289074 134 9 with with IN 10_1101-2020_09_09_289074 134 10 S19P s19p NN 10_1101-2020_09_09_289074 134 11 , , , 10_1101-2020_09_09_289074 134 12 has have VBZ 10_1101-2020_09_09_289074 134 13 been be VBN 10_1101-2020_09_09_289074 134 14 predicted predict VBN 10_1101-2020_09_09_289074 134 15 to to TO 10_1101-2020_09_09_289074 134 16 adversely adversely RB 10_1101-2020_09_09_289074 134 17 affect affect VB 10_1101-2020_09_09_289074 134 18 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 134 19 stability stability NN 10_1101-2020_09_09_289074 134 20 ( ( -LRB- 10_1101-2020_09_09_289074 134 21 36 36 CD 10_1101-2020_09_09_289074 134 22 ) ) -RRB- 10_1101-2020_09_09_289074 134 23 . . . 10_1101-2020_09_09_289074 135 1 M82I M82I NNP 10_1101-2020_09_09_289074 135 2 , , , 10_1101-2020_09_09_289074 135 3 together together RB 10_1101-2020_09_09_289074 135 4 with with IN 10_1101-2020_09_09_289074 135 5 E329 E329 NNP 10_1101-2020_09_09_289074 135 6 G G NNP 10_1101-2020_09_09_289074 135 7 , , , 10_1101-2020_09_09_289074 135 8 has have VBZ 10_1101-2020_09_09_289074 135 9 been be VBN 10_1101-2020_09_09_289074 135 10 simulated simulate VBN 10_1101-2020_09_09_289074 135 11 to to TO 10_1101-2020_09_09_289074 135 12 increase increase VB 10_1101-2020_09_09_289074 135 13 binding bind VBG 10_1101-2020_09_09_289074 135 14 affinity affinity NN 10_1101-2020_09_09_289074 135 15 with with IN 10_1101-2020_09_09_289074 135 16 Spike Spike NNP 10_1101-2020_09_09_289074 135 17 when when WRB 10_1101-2020_09_09_289074 135 18 compared compare VBN 10_1101-2020_09_09_289074 135 19 to to IN 10_1101-2020_09_09_289074 135 20 wild wild JJ 10_1101-2020_09_09_289074 135 21 type type NN 10_1101-2020_09_09_289074 135 22 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 135 23 , , , 10_1101-2020_09_09_289074 135 24 hypothesizing hypothesize VBG 10_1101-2020_09_09_289074 135 25 greater great JJR 10_1101-2020_09_09_289074 135 26 susceptibility susceptibility NN 10_1101-2020_09_09_289074 135 27 to to IN 10_1101-2020_09_09_289074 135 28 SARS SARS NNP 10_1101-2020_09_09_289074 135 29 - - HYPH 10_1101-2020_09_09_289074 135 30 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 135 31 for for IN 10_1101-2020_09_09_289074 135 32 patients patient NNS 10_1101-2020_09_09_289074 135 33 carrying carry VBG 10_1101-2020_09_09_289074 135 34 these these DT 10_1101-2020_09_09_289074 135 35 variants variant NNS 10_1101-2020_09_09_289074 135 36 ( ( -LRB- 10_1101-2020_09_09_289074 135 37 37 37 CD 10_1101-2020_09_09_289074 135 38 ) ) -RRB- 10_1101-2020_09_09_289074 135 39 . . . 10_1101-2020_09_09_289074 136 1 Instead instead RB 10_1101-2020_09_09_289074 136 2 , , , 10_1101-2020_09_09_289074 136 3 E37 E37 NNP 10_1101-2020_09_09_289074 136 4 K K NNP 10_1101-2020_09_09_289074 136 5 ( ( -LRB- 10_1101-2020_09_09_289074 136 6 37 37 CD 10_1101-2020_09_09_289074 136 7 ) ) -RRB- 10_1101-2020_09_09_289074 136 8 and and CC 10_1101-2020_09_09_289074 136 9 G352V g352v CD 10_1101-2020_09_09_289074 136 10 ( ( -LRB- 10_1101-2020_09_09_289074 136 11 38 38 CD 10_1101-2020_09_09_289074 136 12 ) ) -RRB- 10_1101-2020_09_09_289074 136 13 were be VBD 10_1101-2020_09_09_289074 136 14 predicted predict VBN 10_1101-2020_09_09_289074 136 15 to to TO 10_1101-2020_09_09_289074 136 16 possess possess VB 10_1101-2020_09_09_289074 136 17 a a DT 10_1101-2020_09_09_289074 136 18 lower low JJR 10_1101-2020_09_09_289074 136 19 affinity affinity NN 10_1101-2020_09_09_289074 136 20 with with IN 10_1101-2020_09_09_289074 136 21 Spike Spike NNP 10_1101-2020_09_09_289074 136 22 , , , 10_1101-2020_09_09_289074 136 23 suggesting suggest VBG 10_1101-2020_09_09_289074 136 24 lower low JJR 10_1101-2020_09_09_289074 136 25 susceptibility susceptibility NN 10_1101-2020_09_09_289074 136 26 to to IN 10_1101-2020_09_09_289074 136 27 the the DT 10_1101-2020_09_09_289074 136 28 infection infection NN 10_1101-2020_09_09_289074 136 29 . . . 10_1101-2020_09_09_289074 137 1 However however RB 10_1101-2020_09_09_289074 137 2 , , , 10_1101-2020_09_09_289074 137 3 while while IN 10_1101-2020_09_09_289074 137 4 describing describe VBG 10_1101-2020_09_09_289074 137 5 .CC .CC NFP 10_1101-2020_09_09_289074 137 6 - - : 10_1101-2020_09_09_289074 137 7 BY by IN 10_1101-2020_09_09_289074 137 8 - - HYPH 10_1101-2020_09_09_289074 137 9 NC NC NNP 10_1101-2020_09_09_289074 137 10 - - HYPH 10_1101-2020_09_09_289074 137 11 ND ND NNP 10_1101-2020_09_09_289074 137 12 4.0 4.0 CD 10_1101-2020_09_09_289074 137 13 International International NNP 10_1101-2020_09_09_289074 137 14 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 137 15 under under IN 10_1101-2020_09_09_289074 137 16 a a DT 10_1101-2020_09_09_289074 137 17 ( ( -LRB- 10_1101-2020_09_09_289074 137 18 which which WDT 10_1101-2020_09_09_289074 137 19 was be VBD 10_1101-2020_09_09_289074 137 20 not not RB 10_1101-2020_09_09_289074 137 21 certified certify VBN 10_1101-2020_09_09_289074 137 22 by by IN 10_1101-2020_09_09_289074 137 23 peer peer NN 10_1101-2020_09_09_289074 137 24 review review NN 10_1101-2020_09_09_289074 137 25 ) ) -RRB- 10_1101-2020_09_09_289074 137 26 is be VBZ 10_1101-2020_09_09_289074 137 27 the the DT 10_1101-2020_09_09_289074 137 28 author author NN 10_1101-2020_09_09_289074 137 29 / / SYM 10_1101-2020_09_09_289074 137 30 funder funder NN 10_1101-2020_09_09_289074 137 31 , , , 10_1101-2020_09_09_289074 137 32 who who WP 10_1101-2020_09_09_289074 137 33 has have VBZ 10_1101-2020_09_09_289074 137 34 granted grant VBN 10_1101-2020_09_09_289074 137 35 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 137 36 a a DT 10_1101-2020_09_09_289074 137 37 license license NN 10_1101-2020_09_09_289074 137 38 to to TO 10_1101-2020_09_09_289074 137 39 display display VB 10_1101-2020_09_09_289074 137 40 the the DT 10_1101-2020_09_09_289074 137 41 preprint preprint NN 10_1101-2020_09_09_289074 137 42 in in IN 10_1101-2020_09_09_289074 137 43 perpetuity perpetuity NN 10_1101-2020_09_09_289074 137 44 . . . 10_1101-2020_09_09_289074 138 1 It -PRON- PRP 10_1101-2020_09_09_289074 138 2 is be VBZ 10_1101-2020_09_09_289074 138 3 made make VBN 10_1101-2020_09_09_289074 138 4 The the DT 10_1101-2020_09_09_289074 138 5 copyright copyright NN 10_1101-2020_09_09_289074 138 6 holder holder NN 10_1101-2020_09_09_289074 138 7 for for IN 10_1101-2020_09_09_289074 138 8 this this DT 10_1101-2020_09_09_289074 138 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 138 10 version version NN 10_1101-2020_09_09_289074 138 11 posted post VBD 10_1101-2020_09_09_289074 138 12 January January NNP 10_1101-2020_09_09_289074 138 13 5 5 CD 10_1101-2020_09_09_289074 138 14 , , , 10_1101-2020_09_09_289074 138 15 2021 2021 CD 10_1101-2020_09_09_289074 138 16 . . . 10_1101-2020_09_09_289074 138 17 ; ; : 10_1101-2020_09_09_289074 138 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 138 19 : : : 10_1101-2020_09_09_289074 138 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 138 21 preprint preprint NN 10_1101-2020_09_09_289074 138 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 138 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NN 10_1101-2020_09_09_289074 138 24 8 8 CD 10_1101-2020_09_09_289074 138 25 potential potential JJ 10_1101-2020_09_09_289074 138 26 explanations explanation NNS 10_1101-2020_09_09_289074 138 27 to to IN 10_1101-2020_09_09_289074 138 28 the the DT 10_1101-2020_09_09_289074 138 29 existence existence NN 10_1101-2020_09_09_289074 138 30 of of IN 10_1101-2020_09_09_289074 138 31 a a DT 10_1101-2020_09_09_289074 138 32 possible possible JJ 10_1101-2020_09_09_289074 138 33 predisposing predisposing JJ 10_1101-2020_09_09_289074 138 34 genetic genetic JJ 10_1101-2020_09_09_289074 138 35 background background NN 10_1101-2020_09_09_289074 138 36 to to IN 10_1101-2020_09_09_289074 138 37 infection infection NN 10_1101-2020_09_09_289074 138 38 , , , 10_1101-2020_09_09_289074 138 39 all all PDT 10_1101-2020_09_09_289074 138 40 these these DT 10_1101-2020_09_09_289074 138 41 studies study NNS 10_1101-2020_09_09_289074 138 42 remain remain VBP 10_1101-2020_09_09_289074 138 43 inconclusive inconclusive JJ 10_1101-2020_09_09_289074 138 44 in in IN 10_1101-2020_09_09_289074 138 45 linking link VBG 10_1101-2020_09_09_289074 138 46 allele allele NNP 10_1101-2020_09_09_289074 138 47 variants variant NNS 10_1101-2020_09_09_289074 138 48 to to IN 10_1101-2020_09_09_289074 138 49 COVID-19 covid-19 JJ 10_1101-2020_09_09_289074 138 50 susceptibility susceptibility NN 10_1101-2020_09_09_289074 138 51 . . . 10_1101-2020_09_09_289074 139 1 Structurally structurally RB 10_1101-2020_09_09_289074 139 2 , , , 10_1101-2020_09_09_289074 139 3 the the DT 10_1101-2020_09_09_289074 139 4 S19P s19p NN 10_1101-2020_09_09_289074 139 5 variant variant JJ 10_1101-2020_09_09_289074 139 6 may may MD 10_1101-2020_09_09_289074 139 7 greatly greatly RB 10_1101-2020_09_09_289074 139 8 differ differ VB 10_1101-2020_09_09_289074 139 9 from from IN 10_1101-2020_09_09_289074 139 10 the the DT 10_1101-2020_09_09_289074 139 11 reference reference NN 10_1101-2020_09_09_289074 139 12 sequence sequence NN 10_1101-2020_09_09_289074 139 13 in in IN 10_1101-2020_09_09_289074 139 14 the the DT 10_1101-2020_09_09_289074 139 15 interaction interaction NN 10_1101-2020_09_09_289074 139 16 with with IN 10_1101-2020_09_09_289074 139 17 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 139 18 : : : 10_1101-2020_09_09_289074 139 19 Serine Serine NNP 10_1101-2020_09_09_289074 139 20 ( ( -LRB- 10_1101-2020_09_09_289074 139 21 S S NNP 10_1101-2020_09_09_289074 139 22 ) ) -RRB- 10_1101-2020_09_09_289074 139 23 is be VBZ 10_1101-2020_09_09_289074 139 24 a a DT 10_1101-2020_09_09_289074 139 25 polar polar JJ 10_1101-2020_09_09_289074 139 26 residue residue NN 10_1101-2020_09_09_289074 139 27 , , , 10_1101-2020_09_09_289074 139 28 able able JJ 10_1101-2020_09_09_289074 139 29 to to TO 10_1101-2020_09_09_289074 139 30 accept accept VB 10_1101-2020_09_09_289074 139 31 and and CC 10_1101-2020_09_09_289074 139 32 donate donate VB 10_1101-2020_09_09_289074 139 33 , , , 10_1101-2020_09_09_289074 139 34 by by IN 10_1101-2020_09_09_289074 139 35 means mean NNS 10_1101-2020_09_09_289074 139 36 of of IN 10_1101-2020_09_09_289074 139 37 its -PRON- PRP$ 10_1101-2020_09_09_289074 139 38 side side NN 10_1101-2020_09_09_289074 139 39 chain chain NN 10_1101-2020_09_09_289074 139 40 alcoholic alcoholic JJ 10_1101-2020_09_09_289074 139 41 group group NN 10_1101-2020_09_09_289074 139 42 , , , 10_1101-2020_09_09_289074 139 43 a a DT 10_1101-2020_09_09_289074 139 44 hydrogen hydrogen NN 10_1101-2020_09_09_289074 139 45 bond bond NN 10_1101-2020_09_09_289074 139 46 . . . 10_1101-2020_09_09_289074 140 1 Proline Proline NNP 10_1101-2020_09_09_289074 140 2 ( ( -LRB- 10_1101-2020_09_09_289074 140 3 P p NN 10_1101-2020_09_09_289074 140 4 ) ) -RRB- 10_1101-2020_09_09_289074 140 5 , , , 10_1101-2020_09_09_289074 140 6 on on IN 10_1101-2020_09_09_289074 140 7 the the DT 10_1101-2020_09_09_289074 140 8 other other JJ 10_1101-2020_09_09_289074 140 9 hand hand NN 10_1101-2020_09_09_289074 140 10 , , , 10_1101-2020_09_09_289074 140 11 can can MD 10_1101-2020_09_09_289074 140 12 not not RB 10_1101-2020_09_09_289074 140 13 be be VB 10_1101-2020_09_09_289074 140 14 involved involve VBN 10_1101-2020_09_09_289074 140 15 in in IN 10_1101-2020_09_09_289074 140 16 hydrogen hydrogen NN 10_1101-2020_09_09_289074 140 17 bonding bonding NN 10_1101-2020_09_09_289074 140 18 , , , 10_1101-2020_09_09_289074 140 19 and and CC 10_1101-2020_09_09_289074 140 20 therefore therefore RB 10_1101-2020_09_09_289074 140 21 should should MD 10_1101-2020_09_09_289074 140 22 establish establish VB 10_1101-2020_09_09_289074 140 23 a a DT 10_1101-2020_09_09_289074 140 24 weaker weak JJR 10_1101-2020_09_09_289074 140 25 interaction interaction NN 10_1101-2020_09_09_289074 140 26 with with IN 10_1101-2020_09_09_289074 140 27 Spike Spike NNP 10_1101-2020_09_09_289074 140 28 . . . 10_1101-2020_09_09_289074 141 1 In in IN 10_1101-2020_09_09_289074 141 2 fact fact NN 10_1101-2020_09_09_289074 141 3 , , , 10_1101-2020_09_09_289074 141 4 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 141 5 Serine Serine NNP 10_1101-2020_09_09_289074 141 6 19 19 CD 10_1101-2020_09_09_289074 141 7 sidechain sidechain JJ 10_1101-2020_09_09_289074 141 8 donates donate VBZ 10_1101-2020_09_09_289074 141 9 a a DT 10_1101-2020_09_09_289074 141 10 hydrogen hydrogen NN 10_1101-2020_09_09_289074 141 11 bond bond NN 10_1101-2020_09_09_289074 141 12 to to IN 10_1101-2020_09_09_289074 141 13 Spike Spike NNP 10_1101-2020_09_09_289074 141 14 Alanine Alanine NNP 10_1101-2020_09_09_289074 141 15 475 475 CD 10_1101-2020_09_09_289074 141 16 backbone backbone NN 10_1101-2020_09_09_289074 141 17 ( ( -LRB- 10_1101-2020_09_09_289074 141 18 Figure Figure NNP 10_1101-2020_09_09_289074 141 19 S6 s6 NN 10_1101-2020_09_09_289074 141 20 ) ) -RRB- 10_1101-2020_09_09_289074 141 21 and and CC 10_1101-2020_09_09_289074 141 22 potentially potentially RB 10_1101-2020_09_09_289074 141 23 could could MD 10_1101-2020_09_09_289074 141 24 establish establish VB 10_1101-2020_09_09_289074 141 25 the the DT 10_1101-2020_09_09_289074 141 26 same same JJ 10_1101-2020_09_09_289074 141 27 interaction interaction NN 10_1101-2020_09_09_289074 141 28 with with IN 10_1101-2020_09_09_289074 141 29 Spike Spike NNP 10_1101-2020_09_09_289074 141 30 Glycine Glycine NNP 10_1101-2020_09_09_289074 141 31 ( ( -LRB- 10_1101-2020_09_09_289074 141 32 G G NNP 10_1101-2020_09_09_289074 141 33 ) ) -RRB- 10_1101-2020_09_09_289074 141 34 476 476 CD 10_1101-2020_09_09_289074 141 35 , , , 10_1101-2020_09_09_289074 141 36 which which WDT 10_1101-2020_09_09_289074 141 37 could could MD 10_1101-2020_09_09_289074 141 38 also also RB 10_1101-2020_09_09_289074 141 39 be be VB 10_1101-2020_09_09_289074 141 40 mutated mutate VBN 10_1101-2020_09_09_289074 141 41 ( ( -LRB- 10_1101-2020_09_09_289074 141 42 Table table NN 10_1101-2020_09_09_289074 141 43 4 4 CD 10_1101-2020_09_09_289074 141 44 ) ) -RRB- 10_1101-2020_09_09_289074 141 45 . . . 10_1101-2020_09_09_289074 142 1 Both both DT 10_1101-2020_09_09_289074 142 2 Methionine Methionine NNP 10_1101-2020_09_09_289074 142 3 ( ( -LRB- 10_1101-2020_09_09_289074 142 4 M M NNP 10_1101-2020_09_09_289074 142 5 ) ) -RRB- 10_1101-2020_09_09_289074 142 6 82 82 CD 10_1101-2020_09_09_289074 142 7 and and CC 10_1101-2020_09_09_289074 142 8 Glutamate Glutamate NNP 10_1101-2020_09_09_289074 142 9 ( ( -LRB- 10_1101-2020_09_09_289074 142 10 E E NNP 10_1101-2020_09_09_289074 142 11 ) ) -RRB- 10_1101-2020_09_09_289074 142 12 329 329 CD 10_1101-2020_09_09_289074 142 13 are be VBP 10_1101-2020_09_09_289074 142 14 in in IN 10_1101-2020_09_09_289074 142 15 Q3 Q3 NNP 10_1101-2020_09_09_289074 142 16 minimally minimally RB 10_1101-2020_09_09_289074 142 17 contributing contribute VBG 10_1101-2020_09_09_289074 142 18 to to IN 10_1101-2020_09_09_289074 142 19 Spike Spike NNP 10_1101-2020_09_09_289074 142 20 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 142 21 recognition recognition NN 10_1101-2020_09_09_289074 142 22 ( ( -LRB- 10_1101-2020_09_09_289074 142 23 Figures figure NNS 10_1101-2020_09_09_289074 142 24 S7 S7 NNP 10_1101-2020_09_09_289074 142 25 and and CC 10_1101-2020_09_09_289074 142 26 S8 S8 NNP 10_1101-2020_09_09_289074 142 27 ) ) -RRB- 10_1101-2020_09_09_289074 142 28 . . . 10_1101-2020_09_09_289074 143 1 They -PRON- PRP 10_1101-2020_09_09_289074 143 2 are be VBP 10_1101-2020_09_09_289074 143 3 located locate VBN 10_1101-2020_09_09_289074 143 4 within within IN 10_1101-2020_09_09_289074 143 5 two two CD 10_1101-2020_09_09_289074 143 6 alpha alpha NN 10_1101-2020_09_09_289074 143 7 helices helix NNS 10_1101-2020_09_09_289074 143 8 so so IN 10_1101-2020_09_09_289074 143 9 their -PRON- PRP$ 10_1101-2020_09_09_289074 143 10 mutation mutation NN 10_1101-2020_09_09_289074 143 11 could could MD 10_1101-2020_09_09_289074 143 12 modify modify VB 10_1101-2020_09_09_289074 143 13 the the DT 10_1101-2020_09_09_289074 143 14 secondary secondary JJ 10_1101-2020_09_09_289074 143 15 structure structure NN 10_1101-2020_09_09_289074 143 16 of of IN 10_1101-2020_09_09_289074 143 17 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 143 18 corresponding correspond VBG 10_1101-2020_09_09_289074 143 19 to to IN 10_1101-2020_09_09_289074 143 20 a a DT 10_1101-2020_09_09_289074 143 21 different different JJ 10_1101-2020_09_09_289074 143 22 affinity affinity NN 10_1101-2020_09_09_289074 143 23 against against IN 10_1101-2020_09_09_289074 143 24 Spike Spike NNP 10_1101-2020_09_09_289074 143 25 . . . 10_1101-2020_09_09_289074 144 1 Such such PDT 10_1101-2020_09_09_289074 144 2 a a DT 10_1101-2020_09_09_289074 144 3 possibility possibility NN 10_1101-2020_09_09_289074 144 4 should should MD 10_1101-2020_09_09_289074 144 5 be be VB 10_1101-2020_09_09_289074 144 6 more more RBR 10_1101-2020_09_09_289074 144 7 evident evident JJ 10_1101-2020_09_09_289074 144 8 in in IN 10_1101-2020_09_09_289074 144 9 the the DT 10_1101-2020_09_09_289074 144 10 case case NN 10_1101-2020_09_09_289074 144 11 of of IN 10_1101-2020_09_09_289074 144 12 E329 E329 NNP 10_1101-2020_09_09_289074 144 13 G G NNP 10_1101-2020_09_09_289074 144 14 because because IN 10_1101-2020_09_09_289074 144 15 Glutamate Glutamate NNP 10_1101-2020_09_09_289074 144 16 329 329 CD 10_1101-2020_09_09_289074 144 17 sidechain sidechain NN 10_1101-2020_09_09_289074 144 18 is be VBZ 10_1101-2020_09_09_289074 144 19 involved involve VBN 10_1101-2020_09_09_289074 144 20 in in IN 10_1101-2020_09_09_289074 144 21 hydrogen hydrogen NN 10_1101-2020_09_09_289074 144 22 bond bond NN 10_1101-2020_09_09_289074 144 23 with with IN 10_1101-2020_09_09_289074 144 24 ACE-2 ACE-2 NNP 10_1101-2020_09_09_289074 144 25 Glutamine Glutamine NNP 10_1101-2020_09_09_289074 144 26 325 325 CD 10_1101-2020_09_09_289074 144 27 . . . 10_1101-2020_09_09_289074 145 1 Discussion Discussion NNP 10_1101-2020_09_09_289074 145 2 SARS SARS NNP 10_1101-2020_09_09_289074 145 3 - - HYPH 10_1101-2020_09_09_289074 145 4 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 145 5 Spike Spike NNP 10_1101-2020_09_09_289074 145 6 evolved evolve VBD 10_1101-2020_09_09_289074 145 7 through through IN 10_1101-2020_09_09_289074 145 8 a a DT 10_1101-2020_09_09_289074 145 9 series series NN 10_1101-2020_09_09_289074 145 10 of of IN 10_1101-2020_09_09_289074 145 11 adaptive adaptive JJ 10_1101-2020_09_09_289074 145 12 mutations mutation NNS 10_1101-2020_09_09_289074 145 13 that that WDT 10_1101-2020_09_09_289074 145 14 increased increase VBD 10_1101-2020_09_09_289074 145 15 its -PRON- PRP$ 10_1101-2020_09_09_289074 145 16 affinity affinity NN 10_1101-2020_09_09_289074 145 17 for for IN 10_1101-2020_09_09_289074 145 18 the the DT 10_1101-2020_09_09_289074 145 19 human human JJ 10_1101-2020_09_09_289074 145 20 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 145 21 receptor receptor NN 10_1101-2020_09_09_289074 145 22 ( ( -LRB- 10_1101-2020_09_09_289074 145 23 39 39 CD 10_1101-2020_09_09_289074 145 24 ) ) -RRB- 10_1101-2020_09_09_289074 145 25 . . . 10_1101-2020_09_09_289074 146 1 There there EX 10_1101-2020_09_09_289074 146 2 is be VBZ 10_1101-2020_09_09_289074 146 3 no no DT 10_1101-2020_09_09_289074 146 4 reason reason NN 10_1101-2020_09_09_289074 146 5 to to TO 10_1101-2020_09_09_289074 146 6 believe believe VB 10_1101-2020_09_09_289074 146 7 that that IN 10_1101-2020_09_09_289074 146 8 the the DT 10_1101-2020_09_09_289074 146 9 evolution evolution NN 10_1101-2020_09_09_289074 146 10 and and CC 10_1101-2020_09_09_289074 146 11 adaptation adaptation NN 10_1101-2020_09_09_289074 146 12 of of IN 10_1101-2020_09_09_289074 146 13 the the DT 10_1101-2020_09_09_289074 146 14 virus virus NN 10_1101-2020_09_09_289074 146 15 will will MD 10_1101-2020_09_09_289074 146 16 stop stop VB 10_1101-2020_09_09_289074 146 17 , , , 10_1101-2020_09_09_289074 146 18 making make VBG 10_1101-2020_09_09_289074 146 19 continuous continuous JJ 10_1101-2020_09_09_289074 146 20 sequencing sequencing NN 10_1101-2020_09_09_289074 146 21 and and CC 10_1101-2020_09_09_289074 146 22 mutational mutational JJ 10_1101-2020_09_09_289074 146 23 tracking tracking NN 10_1101-2020_09_09_289074 146 24 studies study NNS 10_1101-2020_09_09_289074 146 25 of of IN 10_1101-2020_09_09_289074 146 26 paramount paramount JJ 10_1101-2020_09_09_289074 146 27 importance importance NN 10_1101-2020_09_09_289074 146 28 to to TO 10_1101-2020_09_09_289074 146 29 strategically strategically RB 10_1101-2020_09_09_289074 146 30 contain contain VB 10_1101-2020_09_09_289074 146 31 COVID-19 COVID-19 , 10_1101-2020_09_09_289074 146 32 ( ( -LRB- 10_1101-2020_09_09_289074 146 33 40 40 CD 10_1101-2020_09_09_289074 146 34 ) ) -RRB- 10_1101-2020_09_09_289074 146 35 . . . 10_1101-2020_09_09_289074 147 1 In in IN 10_1101-2020_09_09_289074 147 2 our -PRON- PRP$ 10_1101-2020_09_09_289074 147 3 study study NN 10_1101-2020_09_09_289074 147 4 , , , 10_1101-2020_09_09_289074 147 5 we -PRON- PRP 10_1101-2020_09_09_289074 147 6 highlighted highlight VBD 10_1101-2020_09_09_289074 147 7 which which WDT 10_1101-2020_09_09_289074 147 8 specific specific JJ 10_1101-2020_09_09_289074 147 9 locations location NNS 10_1101-2020_09_09_289074 147 10 of of IN 10_1101-2020_09_09_289074 147 11 Spike Spike NNP 10_1101-2020_09_09_289074 147 12 can can MD 10_1101-2020_09_09_289074 147 13 influence influence VB 10_1101-2020_09_09_289074 147 14 the the DT 10_1101-2020_09_09_289074 147 15 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 147 16 molecular molecular JJ 10_1101-2020_09_09_289074 147 17 recognition recognition NN 10_1101-2020_09_09_289074 147 18 , , , 10_1101-2020_09_09_289074 147 19 required require VBN 10_1101-2020_09_09_289074 147 20 for for IN 10_1101-2020_09_09_289074 147 21 the the DT 10_1101-2020_09_09_289074 147 22 viral viral JJ 10_1101-2020_09_09_289074 147 23 entry entry NN 10_1101-2020_09_09_289074 147 24 into into IN 10_1101-2020_09_09_289074 147 25 the the DT 10_1101-2020_09_09_289074 147 26 host host NN 10_1101-2020_09_09_289074 147 27 cell cell NN 10_1101-2020_09_09_289074 147 28 ( ( -LRB- 10_1101-2020_09_09_289074 147 29 5 5 CD 10_1101-2020_09_09_289074 147 30 ) ) -RRB- 10_1101-2020_09_09_289074 147 31 . . . 10_1101-2020_09_09_289074 148 1 We -PRON- PRP 10_1101-2020_09_09_289074 148 2 further further RB 10_1101-2020_09_09_289074 148 3 showed show VBD 10_1101-2020_09_09_289074 148 4 that that IN 10_1101-2020_09_09_289074 148 5 some some DT 10_1101-2020_09_09_289074 148 6 mutations mutation NNS 10_1101-2020_09_09_289074 148 7 are be VBP 10_1101-2020_09_09_289074 148 8 already already RB 10_1101-2020_09_09_289074 148 9 present present JJ 10_1101-2020_09_09_289074 148 10 in in IN 10_1101-2020_09_09_289074 148 11 the the DT 10_1101-2020_09_09_289074 148 12 SARS SARS NNP 10_1101-2020_09_09_289074 148 13 - - HYPH 10_1101-2020_09_09_289074 148 14 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 148 15 population population NN 10_1101-2020_09_09_289074 148 16 that that WDT 10_1101-2020_09_09_289074 148 17 may may MD 10_1101-2020_09_09_289074 148 18 weakly weakly RB 10_1101-2020_09_09_289074 148 19 affect affect VB 10_1101-2020_09_09_289074 148 20 the the DT 10_1101-2020_09_09_289074 148 21 interaction interaction NN 10_1101-2020_09_09_289074 148 22 with with IN 10_1101-2020_09_09_289074 148 23 the the DT 10_1101-2020_09_09_289074 148 24 human human JJ 10_1101-2020_09_09_289074 148 25 receptor receptor NN 10_1101-2020_09_09_289074 148 26 , , , 10_1101-2020_09_09_289074 148 27 specifically specifically RB 10_1101-2020_09_09_289074 148 28 Spike Spike NNP 10_1101-2020_09_09_289074 148 29 N439 N439 NNP 10_1101-2020_09_09_289074 148 30 K K NNP 10_1101-2020_09_09_289074 148 31 , , , 10_1101-2020_09_09_289074 148 32 S477N S477N NNP 10_1101-2020_09_09_289074 148 33 and and CC 10_1101-2020_09_09_289074 148 34 N501Y. N501Y. NNP 10_1101-2020_09_09_289074 149 1 These these DT 10_1101-2020_09_09_289074 149 2 mutations mutation NNS 10_1101-2020_09_09_289074 149 3 are be VBP 10_1101-2020_09_09_289074 149 4 rising rise VBG 10_1101-2020_09_09_289074 149 5 in in IN 10_1101-2020_09_09_289074 149 6 the the DT 10_1101-2020_09_09_289074 149 7 viral viral JJ 10_1101-2020_09_09_289074 149 8 population population NN 10_1101-2020_09_09_289074 149 9 ( ( -LRB- 10_1101-2020_09_09_289074 149 10 > > NNP 10_1101-2020_09_09_289074 149 11 1 1 CD 10_1101-2020_09_09_289074 149 12 % % NN 10_1101-2020_09_09_289074 149 13 ) ) -RRB- 10_1101-2020_09_09_289074 149 14 and and CC 10_1101-2020_09_09_289074 149 15 in in IN 10_1101-2020_09_09_289074 149 16 particular particular JJ 10_1101-2020_09_09_289074 149 17 N501Y n501y CD 10_1101-2020_09_09_289074 149 18 is be VBZ 10_1101-2020_09_09_289074 149 19 one one CD 10_1101-2020_09_09_289074 149 20 of of IN 10_1101-2020_09_09_289074 149 21 the the DT 10_1101-2020_09_09_289074 149 22 key key JJ 10_1101-2020_09_09_289074 149 23 mutations mutation NNS 10_1101-2020_09_09_289074 149 24 characterizing characterize VBG 10_1101-2020_09_09_289074 149 25 lineage lineage NN 10_1101-2020_09_09_289074 149 26 B.1.1.7 B.1.1.7 NNP 10_1101-2020_09_09_289074 149 27 ( ( -LRB- 10_1101-2020_09_09_289074 149 28 32 32 CD 10_1101-2020_09_09_289074 149 29 ) ) -RRB- 10_1101-2020_09_09_289074 149 30 , , , 10_1101-2020_09_09_289074 149 31 which which WDT 10_1101-2020_09_09_289074 149 32 has have VBZ 10_1101-2020_09_09_289074 149 33 seen see VBN 10_1101-2020_09_09_289074 149 34 a a DT 10_1101-2020_09_09_289074 149 35 recent recent JJ 10_1101-2020_09_09_289074 149 36 dramatic dramatic JJ 10_1101-2020_09_09_289074 149 37 increase increase NN 10_1101-2020_09_09_289074 149 38 in in IN 10_1101-2020_09_09_289074 149 39 frequency frequency NN 10_1101-2020_09_09_289074 149 40 in in IN 10_1101-2020_09_09_289074 149 41 the the DT 10_1101-2020_09_09_289074 149 42 United United NNP 10_1101-2020_09_09_289074 149 43 Kingdom Kingdom NNP 10_1101-2020_09_09_289074 149 44 ( ( -LRB- 10_1101-2020_09_09_289074 149 45 30 30 CD 10_1101-2020_09_09_289074 149 46 ) ) -RRB- 10_1101-2020_09_09_289074 149 47 . . . 10_1101-2020_09_09_289074 150 1 Having have VBG 10_1101-2020_09_09_289074 150 2 identified identify VBN 10_1101-2020_09_09_289074 150 3 this this DT 10_1101-2020_09_09_289074 150 4 mutation mutation NN 10_1101-2020_09_09_289074 150 5 proves prove VBZ 10_1101-2020_09_09_289074 150 6 that that IN 10_1101-2020_09_09_289074 150 7 our -PRON- PRP$ 10_1101-2020_09_09_289074 150 8 combination combination NN 10_1101-2020_09_09_289074 150 9 of of IN 10_1101-2020_09_09_289074 150 10 targeted target VBN 10_1101-2020_09_09_289074 150 11 mutation mutation NN 10_1101-2020_09_09_289074 150 12 frequency frequency NN 10_1101-2020_09_09_289074 150 13 and and CC 10_1101-2020_09_09_289074 150 14 GBPM GBPM NNP 10_1101-2020_09_09_289074 150 15 is be VBZ 10_1101-2020_09_09_289074 150 16 a a DT 10_1101-2020_09_09_289074 150 17 useful useful JJ 10_1101-2020_09_09_289074 150 18 pipeline pipeline NN 10_1101-2020_09_09_289074 150 19 to to TO 10_1101-2020_09_09_289074 150 20 monitor monitor VB 10_1101-2020_09_09_289074 150 21 events event NNS 10_1101-2020_09_09_289074 150 22 in in IN 10_1101-2020_09_09_289074 150 23 the the DT 10_1101-2020_09_09_289074 150 24 key key JJ 10_1101-2020_09_09_289074 150 25 region region NN 10_1101-2020_09_09_289074 150 26 used use VBN 10_1101-2020_09_09_289074 150 27 by by IN 10_1101-2020_09_09_289074 150 28 SARS SARS NNP 10_1101-2020_09_09_289074 150 29 - - HYPH 10_1101-2020_09_09_289074 150 30 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 150 31 to to TO 10_1101-2020_09_09_289074 150 32 recognize recognize VB 10_1101-2020_09_09_289074 150 33 and and CC 10_1101-2020_09_09_289074 150 34 enter enter VB 10_1101-2020_09_09_289074 150 35 human human JJ 10_1101-2020_09_09_289074 150 36 bronchial bronchial JJ 10_1101-2020_09_09_289074 150 37 cells cell NNS 10_1101-2020_09_09_289074 150 38 . . . 10_1101-2020_09_09_289074 151 1 The the DT 10_1101-2020_09_09_289074 151 2 same same JJ 10_1101-2020_09_09_289074 151 3 approach approach NN 10_1101-2020_09_09_289074 151 4 can can MD 10_1101-2020_09_09_289074 151 5 be be VB 10_1101-2020_09_09_289074 151 6 used use VBN 10_1101-2020_09_09_289074 151 7 to to TO 10_1101-2020_09_09_289074 151 8 monitor monitor VB 10_1101-2020_09_09_289074 151 9 , , , 10_1101-2020_09_09_289074 151 10 in in IN 10_1101-2020_09_09_289074 151 11 the the DT 10_1101-2020_09_09_289074 151 12 future future NN 10_1101-2020_09_09_289074 151 13 , , , 10_1101-2020_09_09_289074 151 14 if if IN 10_1101-2020_09_09_289074 151 15 any any DT 10_1101-2020_09_09_289074 151 16 of of IN 10_1101-2020_09_09_289074 151 17 these these DT 10_1101-2020_09_09_289074 151 18 events event NNS 10_1101-2020_09_09_289074 151 19 will will MD 10_1101-2020_09_09_289074 151 20 increase increase VB 10_1101-2020_09_09_289074 151 21 in in IN 10_1101-2020_09_09_289074 151 22 frequency frequency NN 10_1101-2020_09_09_289074 151 23 , , , 10_1101-2020_09_09_289074 151 24 suggesting suggest VBG 10_1101-2020_09_09_289074 151 25 an an DT 10_1101-2020_09_09_289074 151 26 adaptation adaptation NN 10_1101-2020_09_09_289074 151 27 to to IN 10_1101-2020_09_09_289074 151 28 the the DT 10_1101-2020_09_09_289074 151 29 human human JJ 10_1101-2020_09_09_289074 151 30 host host NN 10_1101-2020_09_09_289074 151 31 leveraging leverage VBG 10_1101-2020_09_09_289074 151 32 a a DT 10_1101-2020_09_09_289074 151 33 higher high JJR 10_1101-2020_09_09_289074 151 34 affinity affinity NN 10_1101-2020_09_09_289074 151 35 with with IN 10_1101-2020_09_09_289074 151 36 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 151 37 . . . 10_1101-2020_09_09_289074 152 1 On on IN 10_1101-2020_09_09_289074 152 2 the the DT 10_1101-2020_09_09_289074 152 3 other other JJ 10_1101-2020_09_09_289074 152 4 hand hand NN 10_1101-2020_09_09_289074 152 5 , , , 10_1101-2020_09_09_289074 152 6 we -PRON- PRP 10_1101-2020_09_09_289074 152 7 studied study VBD 10_1101-2020_09_09_289074 152 8 the the DT 10_1101-2020_09_09_289074 152 9 variants variant NNS 10_1101-2020_09_09_289074 152 10 in in IN 10_1101-2020_09_09_289074 152 11 the the DT 10_1101-2020_09_09_289074 152 12 human human JJ 10_1101-2020_09_09_289074 152 13 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 152 14 population population NN 10_1101-2020_09_09_289074 152 15 , , , 10_1101-2020_09_09_289074 152 16 identifying identify VBG 10_1101-2020_09_09_289074 152 17 5 5 CD 10_1101-2020_09_09_289074 152 18 loci loci NN 10_1101-2020_09_09_289074 152 19 that that WDT 10_1101-2020_09_09_289074 152 20 can can MD 10_1101-2020_09_09_289074 152 21 affect affect VB 10_1101-2020_09_09_289074 152 22 the the DT 10_1101-2020_09_09_289074 152 23 binding binding NN 10_1101-2020_09_09_289074 152 24 with with IN 10_1101-2020_09_09_289074 152 25 SARS SARS NNP 10_1101-2020_09_09_289074 152 26 - - HYPH 10_1101-2020_09_09_289074 152 27 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 152 28 Spike Spike NNP 10_1101-2020_09_09_289074 152 29 . . . 10_1101-2020_09_09_289074 153 1 They -PRON- PRP 10_1101-2020_09_09_289074 153 2 are be VBP 10_1101-2020_09_09_289074 153 3 all all RB 10_1101-2020_09_09_289074 153 4 rare rare JJ 10_1101-2020_09_09_289074 153 5 variants variant NNS 10_1101-2020_09_09_289074 153 6 , , , 10_1101-2020_09_09_289074 153 7 with with IN 10_1101-2020_09_09_289074 153 8 the the DT 10_1101-2020_09_09_289074 153 9 most most RBS 10_1101-2020_09_09_289074 153 10 frequent frequent JJ 10_1101-2020_09_09_289074 153 11 , , , 10_1101-2020_09_09_289074 153 12 S19P s19p NN 10_1101-2020_09_09_289074 153 13 , , , 10_1101-2020_09_09_289074 153 14 present present JJ 10_1101-2020_09_09_289074 153 15 in in IN 10_1101-2020_09_09_289074 153 16 0.06 0.06 CD 10_1101-2020_09_09_289074 153 17 % % NN 10_1101-2020_09_09_289074 153 18 of of IN 10_1101-2020_09_09_289074 153 19 the the DT 10_1101-2020_09_09_289074 153 20 population population NN 10_1101-2020_09_09_289074 153 21 , , , 10_1101-2020_09_09_289074 153 22 and and CC 10_1101-2020_09_09_289074 153 23 with with IN 10_1101-2020_09_09_289074 153 24 no no DT 10_1101-2020_09_09_289074 153 25 known know VBN 10_1101-2020_09_09_289074 153 26 clinical clinical JJ 10_1101-2020_09_09_289074 153 27 significance significance NN 10_1101-2020_09_09_289074 153 28 . . . 10_1101-2020_09_09_289074 154 1 However however RB 10_1101-2020_09_09_289074 154 2 , , , 10_1101-2020_09_09_289074 154 3 other other JJ 10_1101-2020_09_09_289074 154 4 in in IN 10_1101-2020_09_09_289074 154 5 silico silico NNS 10_1101-2020_09_09_289074 154 6 studies study NNS 10_1101-2020_09_09_289074 154 7 have have VBP 10_1101-2020_09_09_289074 154 8 predicted predict VBN 10_1101-2020_09_09_289074 154 9 their -PRON- PRP$ 10_1101-2020_09_09_289074 154 10 role role NN 10_1101-2020_09_09_289074 154 11 in in IN 10_1101-2020_09_09_289074 154 12 decreasing decrease VBG 10_1101-2020_09_09_289074 154 13 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 154 14 stability stability NN 10_1101-2020_09_09_289074 154 15 ( ( -LRB- 10_1101-2020_09_09_289074 154 16 S19P s19p NN 10_1101-2020_09_09_289074 154 17 and and CC 10_1101-2020_09_09_289074 154 18 M82I M82I NNP 10_1101-2020_09_09_289074 154 19 ) ) -RRB- 10_1101-2020_09_09_289074 154 20 ( ( -LRB- 10_1101-2020_09_09_289074 154 21 36 36 CD 10_1101-2020_09_09_289074 154 22 ) ) -RRB- 10_1101-2020_09_09_289074 154 23 , , , 10_1101-2020_09_09_289074 154 24 and and CC 10_1101-2020_09_09_289074 154 25 in in IN 10_1101-2020_09_09_289074 154 26 altering alter VBG 10_1101-2020_09_09_289074 154 27 the the DT 10_1101-2020_09_09_289074 154 28 affinity affinity NN 10_1101-2020_09_09_289074 154 29 with with IN 10_1101-2020_09_09_289074 154 30 Spike Spike NNP 10_1101-2020_09_09_289074 154 31 ( ( -LRB- 10_1101-2020_09_09_289074 154 32 increasing increase VBG 10_1101-2020_09_09_289074 154 33 it -PRON- PRP 10_1101-2020_09_09_289074 154 34 : : : 10_1101-2020_09_09_289074 154 35 M82I M82I NNP 10_1101-2020_09_09_289074 154 36 and and CC 10_1101-2020_09_09_289074 154 37 E329 e329 UH 10_1101-2020_09_09_289074 154 38 G G NNP 10_1101-2020_09_09_289074 154 39 ( ( -LRB- 10_1101-2020_09_09_289074 154 40 37 37 CD 10_1101-2020_09_09_289074 154 41 ) ) -RRB- 10_1101-2020_09_09_289074 154 42 ; ; : 10_1101-2020_09_09_289074 154 43 decreasing decrease VBG 10_1101-2020_09_09_289074 154 44 it -PRON- PRP 10_1101-2020_09_09_289074 154 45 : : : 10_1101-2020_09_09_289074 154 46 E37 E37 NNP 10_1101-2020_09_09_289074 154 47 K K NNP 10_1101-2020_09_09_289074 154 48 ( ( -LRB- 10_1101-2020_09_09_289074 154 49 37 37 CD 10_1101-2020_09_09_289074 154 50 ) ) -RRB- 10_1101-2020_09_09_289074 154 51 and and CC 10_1101-2020_09_09_289074 154 52 G352V g352v CD 10_1101-2020_09_09_289074 154 53 ( ( -LRB- 10_1101-2020_09_09_289074 154 54 38 38 CD 10_1101-2020_09_09_289074 154 55 ) ) -RRB- 10_1101-2020_09_09_289074 154 56 ) ) -RRB- 10_1101-2020_09_09_289074 154 57 . . . 10_1101-2020_09_09_289074 155 1 The the DT 10_1101-2020_09_09_289074 155 2 most most RBS 10_1101-2020_09_09_289074 155 3 common common JJ 10_1101-2020_09_09_289074 155 4 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 155 5 variant variant NN 10_1101-2020_09_09_289074 155 6 , , , 10_1101-2020_09_09_289074 155 7 rs41303171 rs41303171 FW 10_1101-2020_09_09_289074 155 8 ( ( -LRB- 10_1101-2020_09_09_289074 155 9 N720D N720D NNP 10_1101-2020_09_09_289074 155 10 ) ) -RRB- 10_1101-2020_09_09_289074 155 11 , , , 10_1101-2020_09_09_289074 155 12 is be VBZ 10_1101-2020_09_09_289074 155 13 not not RB 10_1101-2020_09_09_289074 155 14 located locate VBN 10_1101-2020_09_09_289074 155 15 in in IN 10_1101-2020_09_09_289074 155 16 the the DT 10_1101-2020_09_09_289074 155 17 binding bind VBG 10_1101-2020_09_09_289074 155 18 region region NN 10_1101-2020_09_09_289074 155 19 , , , 10_1101-2020_09_09_289074 155 20 and and CC 10_1101-2020_09_09_289074 155 21 so so RB 10_1101-2020_09_09_289074 155 22 far far RB 10_1101-2020_09_09_289074 155 23 its -PRON- PRP$ 10_1101-2020_09_09_289074 155 24 predicted predict VBN 10_1101-2020_09_09_289074 155 25 effects effect NNS 10_1101-2020_09_09_289074 155 26 on on IN 10_1101-2020_09_09_289074 155 27 the the DT 10_1101-2020_09_09_289074 155 28 etiopathology etiopathology NN 10_1101-2020_09_09_289074 155 29 of of IN 10_1101-2020_09_09_289074 155 30 COVID-19 COVID-19 , 10_1101-2020_09_09_289074 155 31 are be VBP 10_1101-2020_09_09_289074 155 32 still still RB 10_1101-2020_09_09_289074 155 33 largely largely RB 10_1101-2020_09_09_289074 155 34 conjectural conjectural JJ 10_1101-2020_09_09_289074 155 35 and and CC 10_1101-2020_09_09_289074 155 36 associated associate VBN 10_1101-2020_09_09_289074 155 37 to to IN 10_1101-2020_09_09_289074 155 38 neurological neurological JJ 10_1101-2020_09_09_289074 155 39 complications complication NNS 10_1101-2020_09_09_289074 155 40 via via IN 10_1101-2020_09_09_289074 155 41 mechanisms mechanism NNS 10_1101-2020_09_09_289074 155 42 probably probably RB 10_1101-2020_09_09_289074 155 43 independent independent JJ 10_1101-2020_09_09_289074 155 44 from from IN 10_1101-2020_09_09_289074 155 45 direct direct JJ 10_1101-2020_09_09_289074 155 46 interaction interaction NN 10_1101-2020_09_09_289074 155 47 with with IN 10_1101-2020_09_09_289074 155 48 Spike Spike NNP 10_1101-2020_09_09_289074 155 49 ( ( -LRB- 10_1101-2020_09_09_289074 155 50 41 41 CD 10_1101-2020_09_09_289074 155 51 ) ) -RRB- 10_1101-2020_09_09_289074 155 52 . . . 10_1101-2020_09_09_289074 156 1 .CC .CC NFP 10_1101-2020_09_09_289074 156 2 - - : 10_1101-2020_09_09_289074 156 3 BY by IN 10_1101-2020_09_09_289074 156 4 - - HYPH 10_1101-2020_09_09_289074 156 5 NC NC NNP 10_1101-2020_09_09_289074 156 6 - - HYPH 10_1101-2020_09_09_289074 156 7 ND ND NNP 10_1101-2020_09_09_289074 156 8 4.0 4.0 CD 10_1101-2020_09_09_289074 156 9 International International NNP 10_1101-2020_09_09_289074 156 10 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 156 11 under under IN 10_1101-2020_09_09_289074 156 12 a a DT 10_1101-2020_09_09_289074 156 13 ( ( -LRB- 10_1101-2020_09_09_289074 156 14 which which WDT 10_1101-2020_09_09_289074 156 15 was be VBD 10_1101-2020_09_09_289074 156 16 not not RB 10_1101-2020_09_09_289074 156 17 certified certify VBN 10_1101-2020_09_09_289074 156 18 by by IN 10_1101-2020_09_09_289074 156 19 peer peer NN 10_1101-2020_09_09_289074 156 20 review review NN 10_1101-2020_09_09_289074 156 21 ) ) -RRB- 10_1101-2020_09_09_289074 156 22 is be VBZ 10_1101-2020_09_09_289074 156 23 the the DT 10_1101-2020_09_09_289074 156 24 author author NN 10_1101-2020_09_09_289074 156 25 / / SYM 10_1101-2020_09_09_289074 156 26 funder funder NN 10_1101-2020_09_09_289074 156 27 , , , 10_1101-2020_09_09_289074 156 28 who who WP 10_1101-2020_09_09_289074 156 29 has have VBZ 10_1101-2020_09_09_289074 156 30 granted grant VBN 10_1101-2020_09_09_289074 156 31 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 156 32 a a DT 10_1101-2020_09_09_289074 156 33 license license NN 10_1101-2020_09_09_289074 156 34 to to TO 10_1101-2020_09_09_289074 156 35 display display VB 10_1101-2020_09_09_289074 156 36 the the DT 10_1101-2020_09_09_289074 156 37 preprint preprint NN 10_1101-2020_09_09_289074 156 38 in in IN 10_1101-2020_09_09_289074 156 39 perpetuity perpetuity NN 10_1101-2020_09_09_289074 156 40 . . . 10_1101-2020_09_09_289074 157 1 It -PRON- PRP 10_1101-2020_09_09_289074 157 2 is be VBZ 10_1101-2020_09_09_289074 157 3 made make VBN 10_1101-2020_09_09_289074 157 4 The the DT 10_1101-2020_09_09_289074 157 5 copyright copyright NN 10_1101-2020_09_09_289074 157 6 holder holder NN 10_1101-2020_09_09_289074 157 7 for for IN 10_1101-2020_09_09_289074 157 8 this this DT 10_1101-2020_09_09_289074 157 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 157 10 version version NN 10_1101-2020_09_09_289074 157 11 posted post VBD 10_1101-2020_09_09_289074 157 12 January January NNP 10_1101-2020_09_09_289074 157 13 5 5 CD 10_1101-2020_09_09_289074 157 14 , , , 10_1101-2020_09_09_289074 157 15 2021 2021 CD 10_1101-2020_09_09_289074 157 16 . . . 10_1101-2020_09_09_289074 157 17 ; ; : 10_1101-2020_09_09_289074 157 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 157 19 : : : 10_1101-2020_09_09_289074 157 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 157 21 preprint preprint NN 10_1101-2020_09_09_289074 157 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 157 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ RB 10_1101-2020_09_09_289074 157 24 9 9 CD 10_1101-2020_09_09_289074 157 25 It -PRON- PRP 10_1101-2020_09_09_289074 157 26 remains remain VBZ 10_1101-2020_09_09_289074 157 27 to to TO 10_1101-2020_09_09_289074 157 28 be be VB 10_1101-2020_09_09_289074 157 29 seen see VBN 10_1101-2020_09_09_289074 157 30 whether whether IN 10_1101-2020_09_09_289074 157 31 , , , 10_1101-2020_09_09_289074 157 32 in in IN 10_1101-2020_09_09_289074 157 33 the the DT 10_1101-2020_09_09_289074 157 34 future future NN 10_1101-2020_09_09_289074 157 35 , , , 10_1101-2020_09_09_289074 157 36 the the DT 10_1101-2020_09_09_289074 157 37 combination combination NN 10_1101-2020_09_09_289074 157 38 of of IN 10_1101-2020_09_09_289074 157 39 Spike Spike NNP 10_1101-2020_09_09_289074 157 40 and and CC 10_1101-2020_09_09_289074 157 41 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 157 42 sequences sequence NNS 10_1101-2020_09_09_289074 157 43 will will MD 10_1101-2020_09_09_289074 157 44 produce produce VB 10_1101-2020_09_09_289074 157 45 novel novel JJ 10_1101-2020_09_09_289074 157 46 and and CC 10_1101-2020_09_09_289074 157 47 unexpected unexpected JJ 10_1101-2020_09_09_289074 157 48 COVID-19 covid-19 JJ 10_1101-2020_09_09_289074 157 49 specificities specificity NNS 10_1101-2020_09_09_289074 157 50 , , , 10_1101-2020_09_09_289074 157 51 that that WDT 10_1101-2020_09_09_289074 157 52 will will MD 10_1101-2020_09_09_289074 157 53 require require VB 10_1101-2020_09_09_289074 157 54 granular granular JJ 10_1101-2020_09_09_289074 157 55 efforts effort NNS 10_1101-2020_09_09_289074 157 56 in in IN 10_1101-2020_09_09_289074 157 57 developing develop VBG 10_1101-2020_09_09_289074 157 58 wider wide JJR 10_1101-2020_09_09_289074 157 59 - - HYPH 10_1101-2020_09_09_289074 157 60 spectrum spectrum NN 10_1101-2020_09_09_289074 157 61 anti anti JJ 10_1101-2020_09_09_289074 157 62 - - JJ 10_1101-2020_09_09_289074 157 63 SARS sars JJ 10_1101-2020_09_09_289074 157 64 - - HYPH 10_1101-2020_09_09_289074 157 65 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 157 66 strategies strategy NNS 10_1101-2020_09_09_289074 157 67 , , , 10_1101-2020_09_09_289074 157 68 such such JJ 10_1101-2020_09_09_289074 157 69 as as IN 10_1101-2020_09_09_289074 157 70 vaccines vaccine NNS 10_1101-2020_09_09_289074 157 71 or or CC 10_1101-2020_09_09_289074 157 72 antiviral antiviral JJ 10_1101-2020_09_09_289074 157 73 drugs drug NNS 10_1101-2020_09_09_289074 157 74 . . . 10_1101-2020_09_09_289074 158 1 So so RB 10_1101-2020_09_09_289074 158 2 far far RB 10_1101-2020_09_09_289074 158 3 , , , 10_1101-2020_09_09_289074 158 4 our -PRON- PRP$ 10_1101-2020_09_09_289074 158 5 analysis analysis NN 10_1101-2020_09_09_289074 158 6 has have VBZ 10_1101-2020_09_09_289074 158 7 shown show VBN 10_1101-2020_09_09_289074 158 8 a a DT 10_1101-2020_09_09_289074 158 9 location location NN 10_1101-2020_09_09_289074 158 10 on on IN 10_1101-2020_09_09_289074 158 11 the the DT 10_1101-2020_09_09_289074 158 12 Spike Spike NNP 10_1101-2020_09_09_289074 158 13 / / SYM 10_1101-2020_09_09_289074 158 14 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 158 15 complex complex NN 10_1101-2020_09_09_289074 158 16 where where WRB 10_1101-2020_09_09_289074 158 17 both both DT 10_1101-2020_09_09_289074 158 18 proteins protein NNS 10_1101-2020_09_09_289074 158 19 vary vary VBP 10_1101-2020_09_09_289074 158 20 in in IN 10_1101-2020_09_09_289074 158 21 the the DT 10_1101-2020_09_09_289074 158 22 viral viral NNP 10_1101-2020_09_09_289074 158 23 / / SYM 10_1101-2020_09_09_289074 158 24 human human JJ 10_1101-2020_09_09_289074 158 25 population population NN 10_1101-2020_09_09_289074 158 26 , , , 10_1101-2020_09_09_289074 158 27 specifically specifically RB 10_1101-2020_09_09_289074 158 28 on on IN 10_1101-2020_09_09_289074 158 29 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 158 30 S19 S19 NNP 10_1101-2020_09_09_289074 158 31 and and CC 10_1101-2020_09_09_289074 158 32 Spike Spike NNP 10_1101-2020_09_09_289074 158 33 A475 A475 NNP 10_1101-2020_09_09_289074 158 34 / / SYM 10_1101-2020_09_09_289074 158 35 G476 G476 NNP 10_1101-2020_09_09_289074 158 36 . . . 10_1101-2020_09_09_289074 159 1 While while IN 10_1101-2020_09_09_289074 159 2 , , , 10_1101-2020_09_09_289074 159 3 as as IN 10_1101-2020_09_09_289074 159 4 described describe VBN 10_1101-2020_09_09_289074 159 5 in in IN 10_1101-2020_09_09_289074 159 6 our -PRON- PRP$ 10_1101-2020_09_09_289074 159 7 Results result NNS 10_1101-2020_09_09_289074 159 8 , , , 10_1101-2020_09_09_289074 159 9 these these DT 10_1101-2020_09_09_289074 159 10 mutations mutation NNS 10_1101-2020_09_09_289074 159 11 on on IN 10_1101-2020_09_09_289074 159 12 Spike Spike NNP 10_1101-2020_09_09_289074 159 13 are be VBP 10_1101-2020_09_09_289074 159 14 not not RB 10_1101-2020_09_09_289074 159 15 likely likely JJ 10_1101-2020_09_09_289074 159 16 to to TO 10_1101-2020_09_09_289074 159 17 strongly strongly RB 10_1101-2020_09_09_289074 159 18 affect affect VB 10_1101-2020_09_09_289074 159 19 the the DT 10_1101-2020_09_09_289074 159 20 interaction interaction NN 10_1101-2020_09_09_289074 159 21 surface surface NN 10_1101-2020_09_09_289074 159 22 , , , 10_1101-2020_09_09_289074 159 23 future future JJ 10_1101-2020_09_09_289074 159 24 combinations combination NNS 10_1101-2020_09_09_289074 159 25 of of IN 10_1101-2020_09_09_289074 159 26 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 159 27 / / SYM 10_1101-2020_09_09_289074 159 28 Spike Spike NNP 10_1101-2020_09_09_289074 159 29 variants variant NNS 10_1101-2020_09_09_289074 159 30 may may MD 10_1101-2020_09_09_289074 159 31 have have VB 10_1101-2020_09_09_289074 159 32 peculiar peculiar JJ 10_1101-2020_09_09_289074 159 33 effects effect NNS 10_1101-2020_09_09_289074 159 34 that that WDT 10_1101-2020_09_09_289074 159 35 will will MD 10_1101-2020_09_09_289074 159 36 require require VB 10_1101-2020_09_09_289074 159 37 constant constant JJ 10_1101-2020_09_09_289074 159 38 mutation mutation NN 10_1101-2020_09_09_289074 159 39 monitoring monitoring NN 10_1101-2020_09_09_289074 159 40 . . . 10_1101-2020_09_09_289074 160 1 Identifying identify VBG 10_1101-2020_09_09_289074 160 2 single single JJ 10_1101-2020_09_09_289074 160 3 or or CC 10_1101-2020_09_09_289074 160 4 multiple multiple JJ 10_1101-2020_09_09_289074 160 5 AAs aa NNS 10_1101-2020_09_09_289074 160 6 involved involve VBN 10_1101-2020_09_09_289074 160 7 in in IN 10_1101-2020_09_09_289074 160 8 this this DT 10_1101-2020_09_09_289074 160 9 viral viral JJ 10_1101-2020_09_09_289074 160 10 entry entry NN 10_1101-2020_09_09_289074 160 11 interaction interaction NN 10_1101-2020_09_09_289074 160 12 will will MD 10_1101-2020_09_09_289074 160 13 allow allow VB 10_1101-2020_09_09_289074 160 14 for for IN 10_1101-2020_09_09_289074 160 15 personalized personalized JJ 10_1101-2020_09_09_289074 160 16 diagnosis diagnosis NN 10_1101-2020_09_09_289074 160 17 and and CC 10_1101-2020_09_09_289074 160 18 clinical clinical JJ 10_1101-2020_09_09_289074 160 19 prediction prediction NN 10_1101-2020_09_09_289074 160 20 based base VBN 10_1101-2020_09_09_289074 160 21 on on IN 10_1101-2020_09_09_289074 160 22 the the DT 10_1101-2020_09_09_289074 160 23 specific specific JJ 10_1101-2020_09_09_289074 160 24 combination combination NN 10_1101-2020_09_09_289074 160 25 of of IN 10_1101-2020_09_09_289074 160 26 SARS SARS NNP 10_1101-2020_09_09_289074 160 27 - - HYPH 10_1101-2020_09_09_289074 160 28 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 160 29 strain strain NN 10_1101-2020_09_09_289074 160 30 and and CC 10_1101-2020_09_09_289074 160 31 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 160 32 variant variant JJ 10_1101-2020_09_09_289074 160 33 . . . 10_1101-2020_09_09_289074 161 1 Personalized personalize VBN 10_1101-2020_09_09_289074 161 2 COVID-19 covid-19 NN 10_1101-2020_09_09_289074 161 3 treatment treatment NN 10_1101-2020_09_09_289074 161 4 will will MD 10_1101-2020_09_09_289074 161 5 require require VB 10_1101-2020_09_09_289074 161 6 targeted target VBN 10_1101-2020_09_09_289074 161 7 sequencing sequencing NN 10_1101-2020_09_09_289074 161 8 of of IN 10_1101-2020_09_09_289074 161 9 the the DT 10_1101-2020_09_09_289074 161 10 patient patient NN 10_1101-2020_09_09_289074 161 11 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 161 12 and and CC 10_1101-2020_09_09_289074 161 13 Spike Spike NNP 10_1101-2020_09_09_289074 161 14 , , , 10_1101-2020_09_09_289074 161 15 to to TO 10_1101-2020_09_09_289074 161 16 identify identify VB 10_1101-2020_09_09_289074 161 17 the the DT 10_1101-2020_09_09_289074 161 18 combination combination NN 10_1101-2020_09_09_289074 161 19 causing cause VBG 10_1101-2020_09_09_289074 161 20 the the DT 10_1101-2020_09_09_289074 161 21 specific specific JJ 10_1101-2020_09_09_289074 161 22 case case NN 10_1101-2020_09_09_289074 161 23 . . . 10_1101-2020_09_09_289074 162 1 This this DT 10_1101-2020_09_09_289074 162 2 technical technical JJ 10_1101-2020_09_09_289074 162 3 obstacle obstacle NN 10_1101-2020_09_09_289074 162 4 can can MD 10_1101-2020_09_09_289074 162 5 be be VB 10_1101-2020_09_09_289074 162 6 further further RB 10_1101-2020_09_09_289074 162 7 complicated complicate VBN 10_1101-2020_09_09_289074 162 8 by by IN 10_1101-2020_09_09_289074 162 9 the the DT 10_1101-2020_09_09_289074 162 10 intra intra JJ 10_1101-2020_09_09_289074 162 11 - - JJ 10_1101-2020_09_09_289074 162 12 host host JJ 10_1101-2020_09_09_289074 162 13 genetic genetic JJ 10_1101-2020_09_09_289074 162 14 variability variability NN 10_1101-2020_09_09_289074 162 15 of of IN 10_1101-2020_09_09_289074 162 16 SARS SARS NNP 10_1101-2020_09_09_289074 162 17 - - HYPH 10_1101-2020_09_09_289074 162 18 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 162 19 , , , 10_1101-2020_09_09_289074 162 20 which which WDT 10_1101-2020_09_09_289074 162 21 has have VBZ 10_1101-2020_09_09_289074 162 22 recently recently RB 10_1101-2020_09_09_289074 162 23 been be VBN 10_1101-2020_09_09_289074 162 24 reported report VBN 10_1101-2020_09_09_289074 162 25 from from IN 10_1101-2020_09_09_289074 162 26 RNA RNA NNP 10_1101-2020_09_09_289074 162 27 - - HYPH 10_1101-2020_09_09_289074 162 28 Sequencing Sequencing NNP 10_1101-2020_09_09_289074 162 29 studies study NNS 10_1101-2020_09_09_289074 162 30 ( ( -LRB- 10_1101-2020_09_09_289074 162 31 42 42 CD 10_1101-2020_09_09_289074 162 32 ) ) -RRB- 10_1101-2020_09_09_289074 162 33 . . . 10_1101-2020_09_09_289074 163 1 Structural structural JJ 10_1101-2020_09_09_289074 163 2 investigation investigation NN 10_1101-2020_09_09_289074 163 3 will will MD 10_1101-2020_09_09_289074 163 4 benefit benefit VB 10_1101-2020_09_09_289074 163 5 , , , 10_1101-2020_09_09_289074 163 6 in in IN 10_1101-2020_09_09_289074 163 7 the the DT 10_1101-2020_09_09_289074 163 8 next next JJ 10_1101-2020_09_09_289074 163 9 future future NN 10_1101-2020_09_09_289074 163 10 , , , 10_1101-2020_09_09_289074 163 11 from from IN 10_1101-2020_09_09_289074 163 12 the the DT 10_1101-2020_09_09_289074 163 13 availability availability NN 10_1101-2020_09_09_289074 163 14 of of IN 10_1101-2020_09_09_289074 163 15 experimental experimental JJ 10_1101-2020_09_09_289074 163 16 structural structural JJ 10_1101-2020_09_09_289074 163 17 models model NNS 10_1101-2020_09_09_289074 163 18 reporting report VBG 10_1101-2020_09_09_289074 163 19 the the DT 10_1101-2020_09_09_289074 163 20 complete complete JJ 10_1101-2020_09_09_289074 163 21 sequence sequence NN 10_1101-2020_09_09_289074 163 22 of of IN 10_1101-2020_09_09_289074 163 23 both both CC 10_1101-2020_09_09_289074 163 24 Spike Spike NNP 10_1101-2020_09_09_289074 163 25 and and CC 10_1101-2020_09_09_289074 163 26 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 163 27 , , , 10_1101-2020_09_09_289074 163 28 or or CC 10_1101-2020_09_09_289074 163 29 at at IN 10_1101-2020_09_09_289074 163 30 least least JJS 10_1101-2020_09_09_289074 163 31 Spike spike JJ 10_1101-2020_09_09_289074 163 32 . . . 10_1101-2020_09_09_289074 164 1 This this DT 10_1101-2020_09_09_289074 164 2 will will MD 10_1101-2020_09_09_289074 164 3 allow allow VB 10_1101-2020_09_09_289074 164 4 more more RBR 10_1101-2020_09_09_289074 164 5 rigorous rigorous JJ 10_1101-2020_09_09_289074 164 6 computational computational JJ 10_1101-2020_09_09_289074 164 7 analyses analysis NNS 10_1101-2020_09_09_289074 164 8 ( ( -LRB- 10_1101-2020_09_09_289074 164 9 i.e. i.e. FW 10_1101-2020_09_09_289074 165 1 molecular molecular JJ 10_1101-2020_09_09_289074 165 2 dynamics dynamic NNS 10_1101-2020_09_09_289074 165 3 simulation simulation NN 10_1101-2020_09_09_289074 165 4 , , , 10_1101-2020_09_09_289074 165 5 free free JJ 10_1101-2020_09_09_289074 165 6 energy energy NN 10_1101-2020_09_09_289074 165 7 perturbation perturbation NN 10_1101-2020_09_09_289074 165 8 ) ) -RRB- 10_1101-2020_09_09_289074 165 9 on on IN 10_1101-2020_09_09_289074 165 10 the the DT 10_1101-2020_09_09_289074 165 11 effect effect NN 10_1101-2020_09_09_289074 165 12 of of IN 10_1101-2020_09_09_289074 165 13 mutations mutation NNS 10_1101-2020_09_09_289074 165 14 on on IN 10_1101-2020_09_09_289074 165 15 the the DT 10_1101-2020_09_09_289074 165 16 Spike Spike NNP 10_1101-2020_09_09_289074 165 17 / / SYM 10_1101-2020_09_09_289074 165 18 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 165 19 recognition recognition NN 10_1101-2020_09_09_289074 165 20 . . . 10_1101-2020_09_09_289074 166 1 Beyond beyond IN 10_1101-2020_09_09_289074 166 2 the the DT 10_1101-2020_09_09_289074 166 3 complex complex NN 10_1101-2020_09_09_289074 166 4 investigated investigate VBN 10_1101-2020_09_09_289074 166 5 in in IN 10_1101-2020_09_09_289074 166 6 this this DT 10_1101-2020_09_09_289074 166 7 manuscript manuscript NN 10_1101-2020_09_09_289074 166 8 , , , 10_1101-2020_09_09_289074 166 9 our -PRON- PRP$ 10_1101-2020_09_09_289074 166 10 approach approach NN 10_1101-2020_09_09_289074 166 11 can can MD 10_1101-2020_09_09_289074 166 12 be be VB 10_1101-2020_09_09_289074 166 13 fully fully RB 10_1101-2020_09_09_289074 166 14 extended extend VBN 10_1101-2020_09_09_289074 166 15 to to IN 10_1101-2020_09_09_289074 166 16 any any DT 10_1101-2020_09_09_289074 166 17 other other JJ 10_1101-2020_09_09_289074 166 18 partners partner NNS 10_1101-2020_09_09_289074 166 19 in in IN 10_1101-2020_09_09_289074 166 20 the the DT 10_1101-2020_09_09_289074 166 21 SARS SARS NNP 10_1101-2020_09_09_289074 166 22 - - HYPH 10_1101-2020_09_09_289074 166 23 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 166 24 / / SYM 10_1101-2020_09_09_289074 166 25 human human NN 10_1101-2020_09_09_289074 166 26 interactome interactome NN 10_1101-2020_09_09_289074 166 27 , , , 10_1101-2020_09_09_289074 166 28 for for IN 10_1101-2020_09_09_289074 166 29 example example NN 10_1101-2020_09_09_289074 166 30 the the DT 10_1101-2020_09_09_289074 166 31 recently recently RB 10_1101-2020_09_09_289074 166 32 discovered discover VBN 10_1101-2020_09_09_289074 166 33 interaction interaction NN 10_1101-2020_09_09_289074 166 34 between between IN 10_1101-2020_09_09_289074 166 35 viral viral JJ 10_1101-2020_09_09_289074 166 36 protease protease NN 10_1101-2020_09_09_289074 166 37 NSP5 NSP5 NNP 10_1101-2020_09_09_289074 166 38 ( ( -LRB- 10_1101-2020_09_09_289074 166 39 43 43 CD 10_1101-2020_09_09_289074 166 40 ) ) -RRB- 10_1101-2020_09_09_289074 166 41 and and CC 10_1101-2020_09_09_289074 166 42 human human JJ 10_1101-2020_09_09_289074 166 43 histone histone JJ 10_1101-2020_09_09_289074 166 44 deacetylase deacetylase NN 10_1101-2020_09_09_289074 166 45 HDAC2 HDAC2 NNP 10_1101-2020_09_09_289074 166 46 ( ( -LRB- 10_1101-2020_09_09_289074 166 47 44 44 CD 10_1101-2020_09_09_289074 166 48 ) ) -RRB- 10_1101-2020_09_09_289074 166 49 , , , 10_1101-2020_09_09_289074 166 50 which which WDT 10_1101-2020_09_09_289074 166 51 is be VBZ 10_1101-2020_09_09_289074 166 52 indirectly indirectly RB 10_1101-2020_09_09_289074 166 53 responsible responsible JJ 10_1101-2020_09_09_289074 166 54 for for IN 10_1101-2020_09_09_289074 166 55 the the DT 10_1101-2020_09_09_289074 166 56 transcriptional transcriptional JJ 10_1101-2020_09_09_289074 166 57 activation activation NN 10_1101-2020_09_09_289074 166 58 of of IN 10_1101-2020_09_09_289074 166 59 pro pro JJ 10_1101-2020_09_09_289074 166 60 - - JJ 10_1101-2020_09_09_289074 166 61 inflammatory inflammatory JJ 10_1101-2020_09_09_289074 166 62 genes gene NNS 10_1101-2020_09_09_289074 166 63 . . . 10_1101-2020_09_09_289074 167 1 Our -PRON- PRP$ 10_1101-2020_09_09_289074 167 2 approach approach NN 10_1101-2020_09_09_289074 167 3 can can MD 10_1101-2020_09_09_289074 167 4 also also RB 10_1101-2020_09_09_289074 167 5 be be VB 10_1101-2020_09_09_289074 167 6 extended extend VBN 10_1101-2020_09_09_289074 167 7 to to IN 10_1101-2020_09_09_289074 167 8 other other JJ 10_1101-2020_09_09_289074 167 9 viruses virus NNS 10_1101-2020_09_09_289074 167 10 exploiting exploit VBG 10_1101-2020_09_09_289074 167 11 human human JJ 10_1101-2020_09_09_289074 167 12 receptors receptor NNS 10_1101-2020_09_09_289074 167 13 as as IN 10_1101-2020_09_09_289074 167 14 an an DT 10_1101-2020_09_09_289074 167 15 entry entry NN 10_1101-2020_09_09_289074 167 16 mechanism mechanism NN 10_1101-2020_09_09_289074 167 17 , , , 10_1101-2020_09_09_289074 167 18 such such JJ 10_1101-2020_09_09_289074 167 19 as as IN 10_1101-2020_09_09_289074 167 20 CD4 CD4 NNP 10_1101-2020_09_09_289074 167 21 for for IN 10_1101-2020_09_09_289074 167 22 the the DT 10_1101-2020_09_09_289074 167 23 Human Human NNP 10_1101-2020_09_09_289074 167 24 Immunodeficiency Immunodeficiency NNP 10_1101-2020_09_09_289074 167 25 Virus Virus NNP 10_1101-2020_09_09_289074 167 26 ( ( -LRB- 10_1101-2020_09_09_289074 167 27 HIV HIV NNP 10_1101-2020_09_09_289074 167 28 ) ) -RRB- 10_1101-2020_09_09_289074 167 29 or or CC 10_1101-2020_09_09_289074 167 30 TIM-1 TIM-1 NNP 10_1101-2020_09_09_289074 167 31 for for IN 10_1101-2020_09_09_289074 167 32 the the DT 10_1101-2020_09_09_289074 167 33 Ebola Ebola NNP 10_1101-2020_09_09_289074 167 34 virus virus NN 10_1101-2020_09_09_289074 167 35 ( ( -LRB- 10_1101-2020_09_09_289074 167 36 45 45 CD 10_1101-2020_09_09_289074 167 37 ) ) -RRB- 10_1101-2020_09_09_289074 167 38 . . . 10_1101-2020_09_09_289074 168 1 Materials material NNS 10_1101-2020_09_09_289074 168 2 and and CC 10_1101-2020_09_09_289074 168 3 Methods Methods NNP 10_1101-2020_09_09_289074 168 4 Structural Structural NNP 10_1101-2020_09_09_289074 168 5 analysis analysis NN 10_1101-2020_09_09_289074 168 6 The the DT 10_1101-2020_09_09_289074 168 7 PDB PDB NNP 10_1101-2020_09_09_289074 168 8 ( ( -LRB- 10_1101-2020_09_09_289074 168 9 46 46 CD 10_1101-2020_09_09_289074 168 10 ) ) -RRB- 10_1101-2020_09_09_289074 168 11 was be VBD 10_1101-2020_09_09_289074 168 12 searched search VBN 10_1101-2020_09_09_289074 168 13 for for IN 10_1101-2020_09_09_289074 168 14 high high JJ 10_1101-2020_09_09_289074 168 15 resolution resolution NN 10_1101-2020_09_09_289074 168 16 Spike Spike NNP 10_1101-2020_09_09_289074 168 17 / / SYM 10_1101-2020_09_09_289074 168 18 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 168 19 complexes complex NNS 10_1101-2020_09_09_289074 168 20 . . . 10_1101-2020_09_09_289074 169 1 PDB PDB NNP 10_1101-2020_09_09_289074 169 2 entries entry NNS 10_1101-2020_09_09_289074 169 3 6LZG 6LZG NNP 10_1101-2020_09_09_289074 169 4 ( ( -LRB- 10_1101-2020_09_09_289074 169 5 10 10 CD 10_1101-2020_09_09_289074 169 6 ) ) -RRB- 10_1101-2020_09_09_289074 169 7 , , , 10_1101-2020_09_09_289074 169 8 6M0J 6m0j CD 10_1101-2020_09_09_289074 169 9 ( ( -LRB- 10_1101-2020_09_09_289074 169 10 11 11 CD 10_1101-2020_09_09_289074 169 11 ) ) -RRB- 10_1101-2020_09_09_289074 169 12 and and CC 10_1101-2020_09_09_289074 169 13 6VW1 6VW1 NFP 10_1101-2020_09_09_289074 169 14 ( ( -LRB- 10_1101-2020_09_09_289074 169 15 12 12 CD 10_1101-2020_09_09_289074 169 16 ) ) -RRB- 10_1101-2020_09_09_289074 169 17 , , , 10_1101-2020_09_09_289074 169 18 reporting report VBG 10_1101-2020_09_09_289074 169 19 the the DT 10_1101-2020_09_09_289074 169 20 Spike Spike NNP 10_1101-2020_09_09_289074 169 21 RBD RBD NNP 10_1101-2020_09_09_289074 169 22 interacting interact VBG 10_1101-2020_09_09_289074 169 23 to to IN 10_1101-2020_09_09_289074 169 24 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 169 25 , , , 10_1101-2020_09_09_289074 169 26 have have VBP 10_1101-2020_09_09_289074 169 27 been be VBN 10_1101-2020_09_09_289074 169 28 retrieved retrieve VBN 10_1101-2020_09_09_289074 169 29 and and CC 10_1101-2020_09_09_289074 169 30 taken take VBN 10_1101-2020_09_09_289074 169 31 into into IN 10_1101-2020_09_09_289074 169 32 account account NN 10_1101-2020_09_09_289074 169 33 for for IN 10_1101-2020_09_09_289074 169 34 our -PRON- PRP$ 10_1101-2020_09_09_289074 169 35 GBPM GBPM NNP 10_1101-2020_09_09_289074 169 36 analysis analysis NN 10_1101-2020_09_09_289074 169 37 ( ( -LRB- 10_1101-2020_09_09_289074 169 38 28 28 CD 10_1101-2020_09_09_289074 169 39 ) ) -RRB- 10_1101-2020_09_09_289074 169 40 . . . 10_1101-2020_09_09_289074 170 1 Such such PDT 10_1101-2020_09_09_289074 170 2 a a DT 10_1101-2020_09_09_289074 170 3 computational computational JJ 10_1101-2020_09_09_289074 170 4 approach approach NN 10_1101-2020_09_09_289074 170 5 compares compare VBZ 10_1101-2020_09_09_289074 170 6 GRID GRID NNP 10_1101-2020_09_09_289074 170 7 ( ( -LRB- 10_1101-2020_09_09_289074 170 8 47 47 CD 10_1101-2020_09_09_289074 170 9 ) ) -RRB- 10_1101-2020_09_09_289074 170 10 molecular molecular JJ 10_1101-2020_09_09_289074 170 11 interaction interaction NN 10_1101-2020_09_09_289074 170 12 fields field NNS 10_1101-2020_09_09_289074 170 13 ( ( -LRB- 10_1101-2020_09_09_289074 170 14 MIFs mif NNS 10_1101-2020_09_09_289074 170 15 ) ) -RRB- 10_1101-2020_09_09_289074 170 16 computed compute VBD 10_1101-2020_09_09_289074 170 17 on on IN 10_1101-2020_09_09_289074 170 18 a a DT 10_1101-2020_09_09_289074 170 19 generic generic JJ 10_1101-2020_09_09_289074 170 20 complex complex NN 10_1101-2020_09_09_289074 170 21 ( ( -LRB- 10_1101-2020_09_09_289074 170 22 A a NN 10_1101-2020_09_09_289074 170 23 ) ) -RRB- 10_1101-2020_09_09_289074 170 24 and and CC 10_1101-2020_09_09_289074 170 25 on on IN 10_1101-2020_09_09_289074 170 26 its -PRON- PRP$ 10_1101-2020_09_09_289074 170 27 host host NN 10_1101-2020_09_09_289074 170 28 ( ( -LRB- 10_1101-2020_09_09_289074 170 29 B b NN 10_1101-2020_09_09_289074 170 30 ) ) -RRB- 10_1101-2020_09_09_289074 170 31 and and CC 10_1101-2020_09_09_289074 170 32 guest guest NNP 10_1101-2020_09_09_289074 170 33 ( ( -LRB- 10_1101-2020_09_09_289074 170 34 C c NN 10_1101-2020_09_09_289074 170 35 ) ) -RRB- 10_1101-2020_09_09_289074 170 36 components component NNS 10_1101-2020_09_09_289074 170 37 , , , 10_1101-2020_09_09_289074 170 38 separately separately RB 10_1101-2020_09_09_289074 170 39 . . . 10_1101-2020_09_09_289074 171 1 Actually actually RB 10_1101-2020_09_09_289074 171 2 , , , 10_1101-2020_09_09_289074 171 3 MIFs mif NNS 10_1101-2020_09_09_289074 171 4 describe describe VBP 10_1101-2020_09_09_289074 171 5 the the DT 10_1101-2020_09_09_289074 171 6 interaction interaction NN 10_1101-2020_09_09_289074 171 7 between between IN 10_1101-2020_09_09_289074 171 8 a a DT 10_1101-2020_09_09_289074 171 9 certain certain JJ 10_1101-2020_09_09_289074 171 10 probe probe NN 10_1101-2020_09_09_289074 171 11 and and CC 10_1101-2020_09_09_289074 171 12 a a DT 10_1101-2020_09_09_289074 171 13 certain certain JJ 10_1101-2020_09_09_289074 171 14 target target NN 10_1101-2020_09_09_289074 171 15 . . . 10_1101-2020_09_09_289074 172 1 If if IN 10_1101-2020_09_09_289074 172 2 the the DT 10_1101-2020_09_09_289074 172 3 target target NN 10_1101-2020_09_09_289074 172 4 is be VBZ 10_1101-2020_09_09_289074 172 5 represented represent VBN 10_1101-2020_09_09_289074 172 6 by by IN 10_1101-2020_09_09_289074 172 7 a a DT 10_1101-2020_09_09_289074 172 8 complex complex NN 10_1101-2020_09_09_289074 172 9 , , , 10_1101-2020_09_09_289074 172 10 depending depend VBG 10_1101-2020_09_09_289074 172 11 on on IN 10_1101-2020_09_09_289074 172 12 the the DT 10_1101-2020_09_09_289074 172 13 selected select VBN 10_1101-2020_09_09_289074 172 14 area area NN 10_1101-2020_09_09_289074 172 15 , , , 10_1101-2020_09_09_289074 172 16 the the DT 10_1101-2020_09_09_289074 172 17 MIF MIF NNP 10_1101-2020_09_09_289074 172 18 energies energy NNS 10_1101-2020_09_09_289074 172 19 can can MD 10_1101-2020_09_09_289074 172 20 be be VB 10_1101-2020_09_09_289074 172 21 referred refer VBN 10_1101-2020_09_09_289074 172 22 to to IN 10_1101-2020_09_09_289074 172 23 the the DT 10_1101-2020_09_09_289074 172 24 interaction interaction NN 10_1101-2020_09_09_289074 172 25 between between IN 10_1101-2020_09_09_289074 172 26 the the DT 10_1101-2020_09_09_289074 172 27 probe probe NN 10_1101-2020_09_09_289074 172 28 and and CC 10_1101-2020_09_09_289074 172 29 one one CD 10_1101-2020_09_09_289074 172 30 of of IN 10_1101-2020_09_09_289074 172 31 the the DT 10_1101-2020_09_09_289074 172 32 complex complex JJ 10_1101-2020_09_09_289074 172 33 subunits subunit NNS 10_1101-2020_09_09_289074 172 34 or or CC 10_1101-2020_09_09_289074 172 35 , , , 10_1101-2020_09_09_289074 172 36 at at IN 10_1101-2020_09_09_289074 172 37 the the DT 10_1101-2020_09_09_289074 172 38 host host NN 10_1101-2020_09_09_289074 172 39 / / SYM 10_1101-2020_09_09_289074 172 40 guest guest NN 10_1101-2020_09_09_289074 172 41 interface interface NN 10_1101-2020_09_09_289074 172 42 , , , 10_1101-2020_09_09_289074 172 43 with with IN 10_1101-2020_09_09_289074 172 44 both both DT 10_1101-2020_09_09_289074 172 45 of of IN 10_1101-2020_09_09_289074 172 46 them -PRON- PRP 10_1101-2020_09_09_289074 172 47 . . . 10_1101-2020_09_09_289074 173 1 The the DT 10_1101-2020_09_09_289074 173 2 GBPM GBPM NNP 10_1101-2020_09_09_289074 173 3 analysis analysis NN 10_1101-2020_09_09_289074 173 4 , , , 10_1101-2020_09_09_289074 173 5 objectively objectively RB 10_1101-2020_09_09_289074 173 6 , , , 10_1101-2020_09_09_289074 173 7 highlights highlight VBZ 10_1101-2020_09_09_289074 173 8 these these DT 10_1101-2020_09_09_289074 173 9 last last JJ 10_1101-2020_09_09_289074 173 10 . . . 10_1101-2020_09_09_289074 174 1 Five five CD 10_1101-2020_09_09_289074 174 2 steps step NNS 10_1101-2020_09_09_289074 174 3 are be VBP 10_1101-2020_09_09_289074 174 4 required require VBN 10_1101-2020_09_09_289074 174 5 : : : 10_1101-2020_09_09_289074 174 6 ( ( -LRB- 10_1101-2020_09_09_289074 174 7 1 1 LS 10_1101-2020_09_09_289074 174 8 ) ) -RRB- 10_1101-2020_09_09_289074 174 9 the the DT 10_1101-2020_09_09_289074 174 10 complex complex JJ 10_1101-2020_09_09_289074 174 11 A A NNP 10_1101-2020_09_09_289074 174 12 is be VBZ 10_1101-2020_09_09_289074 174 13 disassembled disassemble VBN 10_1101-2020_09_09_289074 174 14 in in IN 10_1101-2020_09_09_289074 174 15 its -PRON- PRP$ 10_1101-2020_09_09_289074 174 16 subunits subunit NNS 10_1101-2020_09_09_289074 174 17 B B NNP 10_1101-2020_09_09_289074 174 18 and and CC 10_1101-2020_09_09_289074 174 19 C C NNP 10_1101-2020_09_09_289074 174 20 ; ; : 10_1101-2020_09_09_289074 174 21 ( ( -LRB- 10_1101-2020_09_09_289074 174 22 2 2 LS 10_1101-2020_09_09_289074 174 23 ) ) -RRB- 10_1101-2020_09_09_289074 174 24 MIFs mif NNS 10_1101-2020_09_09_289074 174 25 are be VBP 10_1101-2020_09_09_289074 174 26 computed compute VBN 10_1101-2020_09_09_289074 174 27 on on IN 10_1101-2020_09_09_289074 174 28 A a NN 10_1101-2020_09_09_289074 174 29 , , , 10_1101-2020_09_09_289074 174 30 B b NN 10_1101-2020_09_09_289074 174 31 and and CC 10_1101-2020_09_09_289074 174 32 C C NNP 10_1101-2020_09_09_289074 174 33 by by IN 10_1101-2020_09_09_289074 174 34 using use VBG 10_1101-2020_09_09_289074 174 35 the the DT 10_1101-2020_09_09_289074 174 36 most most RBS 10_1101-2020_09_09_289074 174 37 appropriate appropriate JJ 10_1101-2020_09_09_289074 174 38 GRID GRID NNP 10_1101-2020_09_09_289074 174 39 probes probe NNS 10_1101-2020_09_09_289074 174 40 . . . 10_1101-2020_09_09_289074 175 1 A a DT 10_1101-2020_09_09_289074 175 2 hydrogen hydrogen NN 10_1101-2020_09_09_289074 175 3 bond bond NN 10_1101-2020_09_09_289074 175 4 acceptor acceptor NN 10_1101-2020_09_09_289074 175 5 / / SYM 10_1101-2020_09_09_289074 175 6 donor donor NN 10_1101-2020_09_09_289074 175 7 and and CC 10_1101-2020_09_09_289074 175 8 a a DT 10_1101-2020_09_09_289074 175 9 generic generic JJ 10_1101-2020_09_09_289074 175 10 hydrophobic hydrophobic NN 10_1101-2020_09_09_289074 175 11 probe probe NN 10_1101-2020_09_09_289074 175 12 can can MD 10_1101-2020_09_09_289074 175 13 describe describe VB 10_1101-2020_09_09_289074 175 14 the the DT 10_1101-2020_09_09_289074 175 15 basic basic JJ 10_1101-2020_09_09_289074 175 16 interaction interaction NN 10_1101-2020_09_09_289074 175 17 . . . 10_1101-2020_09_09_289074 176 1 Because because IN 10_1101-2020_09_09_289074 176 2 GRID GRID NNP 10_1101-2020_09_09_289074 176 3 MIFs mif NNS 10_1101-2020_09_09_289074 176 4 are be VBP 10_1101-2020_09_09_289074 176 5 stored store VBN 10_1101-2020_09_09_289074 176 6 as as IN 10_1101-2020_09_09_289074 176 7 a a DT 10_1101-2020_09_09_289074 176 8 3D 3d JJ 10_1101-2020_09_09_289074 176 9 matrix matrix NN 10_1101-2020_09_09_289074 176 10 of of IN 10_1101-2020_09_09_289074 176 11 interaction interaction NN 10_1101-2020_09_09_289074 176 12 energy energy NN 10_1101-2020_09_09_289074 176 13 points point NNS 10_1101-2020_09_09_289074 176 14 ( ( -LRB- 10_1101-2020_09_09_289074 176 15 IEP IEP NNP 10_1101-2020_09_09_289074 176 16 ) ) -RRB- 10_1101-2020_09_09_289074 176 17 , , , 10_1101-2020_09_09_289074 176 18 the the DT 10_1101-2020_09_09_289074 176 19 same same JJ 10_1101-2020_09_09_289074 176 20 box box NN 10_1101-2020_09_09_289074 176 21 dimensions dimension NNS 10_1101-2020_09_09_289074 176 22 are be VBP 10_1101-2020_09_09_289074 176 23 adopted adopt VBN 10_1101-2020_09_09_289074 176 24 in in IN 10_1101-2020_09_09_289074 176 25 all all DT 10_1101-2020_09_09_289074 176 26 calculations calculation NNS 10_1101-2020_09_09_289074 176 27 ; ; , 10_1101-2020_09_09_289074 176 28 ( ( -LRB- 10_1101-2020_09_09_289074 176 29 3 3 LS 10_1101-2020_09_09_289074 176 30 ) ) -RRB- 10_1101-2020_09_09_289074 176 31 each each DT 10_1101-2020_09_09_289074 176 32 IEP iep NN 10_1101-2020_09_09_289074 176 33 of of IN 10_1101-2020_09_09_289074 176 34 B b NN 10_1101-2020_09_09_289074 176 35 is be VBZ 10_1101-2020_09_09_289074 176 36 compared compare VBN 10_1101-2020_09_09_289074 176 37 with with IN 10_1101-2020_09_09_289074 176 38 respect respect NN 10_1101-2020_09_09_289074 176 39 to to IN 10_1101-2020_09_09_289074 176 40 the the DT 10_1101-2020_09_09_289074 176 41 equivalent equivalent JJ 10_1101-2020_09_09_289074 176 42 point point NN 10_1101-2020_09_09_289074 176 43 of of IN 10_1101-2020_09_09_289074 176 44 A a DT 10_1101-2020_09_09_289074 176 45 generating generate VBG 10_1101-2020_09_09_289074 176 46 a a DT 10_1101-2020_09_09_289074 176 47 new new JJ 10_1101-2020_09_09_289074 176 48 MIFs mif NNS 10_1101-2020_09_09_289074 176 49 named name VBN 10_1101-2020_09_09_289074 176 50 D. D. NNP 10_1101-2020_09_09_289074 176 51 The the DT 10_1101-2020_09_09_289074 176 52 following follow VBG 10_1101-2020_09_09_289074 176 53 algorithm algorithm NN 10_1101-2020_09_09_289074 176 54 , , , 10_1101-2020_09_09_289074 176 55 available available JJ 10_1101-2020_09_09_289074 176 56 into into IN 10_1101-2020_09_09_289074 176 57 the the DT 10_1101-2020_09_09_289074 176 58 GRAB GRAB NNP 10_1101-2020_09_09_289074 176 59 tool tool NN 10_1101-2020_09_09_289074 176 60 , , , 10_1101-2020_09_09_289074 176 61 is be VBZ 10_1101-2020_09_09_289074 176 62 applied apply VBN 10_1101-2020_09_09_289074 176 63 : : : 10_1101-2020_09_09_289074 176 64 if if IN 10_1101-2020_09_09_289074 176 65 IEP(A IEP(A NNP 10_1101-2020_09_09_289074 176 66 ) ) -RRB- 10_1101-2020_09_09_289074 176 67 > > XX 10_1101-2020_09_09_289074 176 68 0 0 NFP 10_1101-2020_09_09_289074 176 69 and and CC 10_1101-2020_09_09_289074 176 70 IEP(B IEP(B NNP 10_1101-2020_09_09_289074 176 71 ) ) -RRB- 10_1101-2020_09_09_289074 176 72 > > XX 10_1101-2020_09_09_289074 176 73 0 0 NFP 10_1101-2020_09_09_289074 176 74 then then RB 10_1101-2020_09_09_289074 176 75 IEP(D IEP(D NNP 10_1101-2020_09_09_289074 176 76 ) ) -RRB- 10_1101-2020_09_09_289074 176 77 = = SYM 10_1101-2020_09_09_289074 176 78 0 0 NFP 10_1101-2020_09_09_289074 176 79 ; ; : 10_1101-2020_09_09_289074 176 80 if if IN 10_1101-2020_09_09_289074 176 81 IEP(A IEP(A NNP 10_1101-2020_09_09_289074 176 82 ) ) -RRB- 10_1101-2020_09_09_289074 176 83 > > XX 10_1101-2020_09_09_289074 176 84 0 0 NFP 10_1101-2020_09_09_289074 176 85 and and CC 10_1101-2020_09_09_289074 176 86 IEP(B IEP(B NNP 10_1101-2020_09_09_289074 176 87 ) ) -RRB- 10_1101-2020_09_09_289074 176 88 < < XX 10_1101-2020_09_09_289074 176 89 0 0 NFP 10_1101-2020_09_09_289074 176 90 then then RB 10_1101-2020_09_09_289074 176 91 IEP(D IEP(D NNP 10_1101-2020_09_09_289074 176 92 ) ) -RRB- 10_1101-2020_09_09_289074 176 93 = = NFP 10_1101-2020_09_09_289074 176 94 IEP(B IEP(B NNP 10_1101-2020_09_09_289074 176 95 ) ) -RRB- 10_1101-2020_09_09_289074 176 96 ; ; : 10_1101-2020_09_09_289074 176 97 if if IN 10_1101-2020_09_09_289074 176 98 IEP(A IEP(A NNP 10_1101-2020_09_09_289074 176 99 ) ) -RRB- 10_1101-2020_09_09_289074 176 100 < < XX 10_1101-2020_09_09_289074 176 101 0 0 NFP 10_1101-2020_09_09_289074 176 102 and and CC 10_1101-2020_09_09_289074 176 103 IEP(B IEP(B NNP 10_1101-2020_09_09_289074 176 104 ) ) -RRB- 10_1101-2020_09_09_289074 176 105 > > XX 10_1101-2020_09_09_289074 176 106 0 0 NFP 10_1101-2020_09_09_289074 176 107 then then RB 10_1101-2020_09_09_289074 176 108 IEP(D IEP(D NNP 10_1101-2020_09_09_289074 176 109 ) ) -RRB- 10_1101-2020_09_09_289074 176 110 .CC .CC : 10_1101-2020_09_09_289074 176 111 - - : 10_1101-2020_09_09_289074 176 112 BY by IN 10_1101-2020_09_09_289074 176 113 - - HYPH 10_1101-2020_09_09_289074 176 114 NC NC NNP 10_1101-2020_09_09_289074 176 115 - - HYPH 10_1101-2020_09_09_289074 176 116 ND ND NNP 10_1101-2020_09_09_289074 176 117 4.0 4.0 CD 10_1101-2020_09_09_289074 176 118 International International NNP 10_1101-2020_09_09_289074 176 119 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 176 120 under under IN 10_1101-2020_09_09_289074 176 121 a a DT 10_1101-2020_09_09_289074 176 122 ( ( -LRB- 10_1101-2020_09_09_289074 176 123 which which WDT 10_1101-2020_09_09_289074 176 124 was be VBD 10_1101-2020_09_09_289074 176 125 not not RB 10_1101-2020_09_09_289074 176 126 certified certify VBN 10_1101-2020_09_09_289074 176 127 by by IN 10_1101-2020_09_09_289074 176 128 peer peer NN 10_1101-2020_09_09_289074 176 129 review review NN 10_1101-2020_09_09_289074 176 130 ) ) -RRB- 10_1101-2020_09_09_289074 176 131 is be VBZ 10_1101-2020_09_09_289074 176 132 the the DT 10_1101-2020_09_09_289074 176 133 author author NN 10_1101-2020_09_09_289074 176 134 / / SYM 10_1101-2020_09_09_289074 176 135 funder funder NN 10_1101-2020_09_09_289074 176 136 , , , 10_1101-2020_09_09_289074 176 137 who who WP 10_1101-2020_09_09_289074 176 138 has have VBZ 10_1101-2020_09_09_289074 176 139 granted grant VBN 10_1101-2020_09_09_289074 176 140 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 176 141 a a DT 10_1101-2020_09_09_289074 176 142 license license NN 10_1101-2020_09_09_289074 176 143 to to TO 10_1101-2020_09_09_289074 176 144 display display VB 10_1101-2020_09_09_289074 176 145 the the DT 10_1101-2020_09_09_289074 176 146 preprint preprint NN 10_1101-2020_09_09_289074 176 147 in in IN 10_1101-2020_09_09_289074 176 148 perpetuity perpetuity NN 10_1101-2020_09_09_289074 176 149 . . . 10_1101-2020_09_09_289074 177 1 It -PRON- PRP 10_1101-2020_09_09_289074 177 2 is be VBZ 10_1101-2020_09_09_289074 177 3 made make VBN 10_1101-2020_09_09_289074 177 4 The the DT 10_1101-2020_09_09_289074 177 5 copyright copyright NN 10_1101-2020_09_09_289074 177 6 holder holder NN 10_1101-2020_09_09_289074 177 7 for for IN 10_1101-2020_09_09_289074 177 8 this this DT 10_1101-2020_09_09_289074 177 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 177 10 version version NN 10_1101-2020_09_09_289074 177 11 posted post VBD 10_1101-2020_09_09_289074 177 12 January January NNP 10_1101-2020_09_09_289074 177 13 5 5 CD 10_1101-2020_09_09_289074 177 14 , , , 10_1101-2020_09_09_289074 177 15 2021 2021 CD 10_1101-2020_09_09_289074 177 16 . . . 10_1101-2020_09_09_289074 177 17 ; ; : 10_1101-2020_09_09_289074 177 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 177 19 : : : 10_1101-2020_09_09_289074 177 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 177 21 preprint preprint NN 10_1101-2020_09_09_289074 177 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 ADD 10_1101-2020_09_09_289074 177 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ CD 10_1101-2020_09_09_289074 177 24 10 10 CD 10_1101-2020_09_09_289074 177 25 = = SYM 10_1101-2020_09_09_289074 177 26 -IEP(A -IEP(A NNS 10_1101-2020_09_09_289074 177 27 ) ) -RRB- 10_1101-2020_09_09_289074 177 28 ; ; : 10_1101-2020_09_09_289074 177 29 if if IN 10_1101-2020_09_09_289074 177 30 IEP(A IEP(A NNP 10_1101-2020_09_09_289074 177 31 ) ) -RRB- 10_1101-2020_09_09_289074 177 32 < < XX 10_1101-2020_09_09_289074 177 33 0 0 NFP 10_1101-2020_09_09_289074 177 34 and and CC 10_1101-2020_09_09_289074 177 35 IEP(B IEP(B NNP 10_1101-2020_09_09_289074 177 36 ) ) -RRB- 10_1101-2020_09_09_289074 177 37 < < XX 10_1101-2020_09_09_289074 177 38 0 0 NFP 10_1101-2020_09_09_289074 177 39 then then RB 10_1101-2020_09_09_289074 177 40 IEP(D IEP(D NNP 10_1101-2020_09_09_289074 177 41 ) ) -RRB- 10_1101-2020_09_09_289074 177 42 = = NFP 10_1101-2020_09_09_289074 177 43 IEP(A)-IEP(B IEP(A)-IEP(B NNS 10_1101-2020_09_09_289074 177 44 ) ) -RRB- 10_1101-2020_09_09_289074 177 45 . . . 10_1101-2020_09_09_289074 178 1 The the DT 10_1101-2020_09_09_289074 178 2 resulting result VBG 10_1101-2020_09_09_289074 178 3 MIF MIF NNP 10_1101-2020_09_09_289074 178 4 D D NNP 10_1101-2020_09_09_289074 178 5 reports report NNS 10_1101-2020_09_09_289074 178 6 as as IN 10_1101-2020_09_09_289074 178 7 negative negative JJ 10_1101-2020_09_09_289074 178 8 energy energy NN 10_1101-2020_09_09_289074 178 9 values value NNS 10_1101-2020_09_09_289074 178 10 the the DT 10_1101-2020_09_09_289074 178 11 productive productive JJ 10_1101-2020_09_09_289074 178 12 interaction interaction NN 10_1101-2020_09_09_289074 178 13 between between IN 10_1101-2020_09_09_289074 178 14 the the DT 10_1101-2020_09_09_289074 178 15 GRID GRID NNP 10_1101-2020_09_09_289074 178 16 probe probe NN 10_1101-2020_09_09_289074 178 17 and and CC 10_1101-2020_09_09_289074 178 18 B b NN 10_1101-2020_09_09_289074 178 19 and and CC 10_1101-2020_09_09_289074 178 20 the the DT 10_1101-2020_09_09_289074 178 21 interface interface NN 10_1101-2020_09_09_289074 178 22 A a NN 10_1101-2020_09_09_289074 178 23 and and CC 10_1101-2020_09_09_289074 178 24 B b NN 10_1101-2020_09_09_289074 178 25 ; ; : 10_1101-2020_09_09_289074 178 26 ( ( -LRB- 10_1101-2020_09_09_289074 178 27 4 4 LS 10_1101-2020_09_09_289074 178 28 ) ) -RRB- 10_1101-2020_09_09_289074 178 29 in in IN 10_1101-2020_09_09_289074 178 30 order order NN 10_1101-2020_09_09_289074 178 31 to to TO 10_1101-2020_09_09_289074 178 32 obscure obscure VB 10_1101-2020_09_09_289074 178 33 the the DT 10_1101-2020_09_09_289074 178 34 interaction interaction NN 10_1101-2020_09_09_289074 178 35 between between IN 10_1101-2020_09_09_289074 178 36 the the DT 10_1101-2020_09_09_289074 178 37 probe probe NN 10_1101-2020_09_09_289074 178 38 and and CC 10_1101-2020_09_09_289074 178 39 B b NN 10_1101-2020_09_09_289074 178 40 , , , 10_1101-2020_09_09_289074 178 41 MIFs mif NNS 10_1101-2020_09_09_289074 178 42 D d NN 10_1101-2020_09_09_289074 178 43 and and CC 10_1101-2020_09_09_289074 178 44 C C NNP 10_1101-2020_09_09_289074 178 45 are be VBP 10_1101-2020_09_09_289074 178 46 compared compare VBN 10_1101-2020_09_09_289074 178 47 , , , 10_1101-2020_09_09_289074 178 48 by by IN 10_1101-2020_09_09_289074 178 49 using use VBG 10_1101-2020_09_09_289074 178 50 the the DT 10_1101-2020_09_09_289074 178 51 GRAB GRAB NNP 10_1101-2020_09_09_289074 178 52 approach approach NN 10_1101-2020_09_09_289074 178 53 , , , 10_1101-2020_09_09_289074 178 54 producing produce VBG 10_1101-2020_09_09_289074 178 55 to to IN 10_1101-2020_09_09_289074 178 56 a a DT 10_1101-2020_09_09_289074 178 57 new new JJ 10_1101-2020_09_09_289074 178 58 MIF MIF NNP 10_1101-2020_09_09_289074 178 59 E e NN 10_1101-2020_09_09_289074 178 60 ; ; , 10_1101-2020_09_09_289074 178 61 ( ( -LRB- 10_1101-2020_09_09_289074 178 62 5 5 LS 10_1101-2020_09_09_289074 178 63 ) ) -RRB- 10_1101-2020_09_09_289074 178 64 the the DT 10_1101-2020_09_09_289074 178 65 most most RBS 10_1101-2020_09_09_289074 178 66 relevant relevant JJ 10_1101-2020_09_09_289074 178 67 interaction interaction NN 10_1101-2020_09_09_289074 178 68 points point NNS 10_1101-2020_09_09_289074 178 69 ( ( -LRB- 10_1101-2020_09_09_289074 178 70 GBPM GBPM NNP 10_1101-2020_09_09_289074 178 71 features feature NNS 10_1101-2020_09_09_289074 178 72 ) ) -RRB- 10_1101-2020_09_09_289074 178 73 of of IN 10_1101-2020_09_09_289074 178 74 the the DT 10_1101-2020_09_09_289074 178 75 MIF MIF NNP 10_1101-2020_09_09_289074 178 76 E e NN 10_1101-2020_09_09_289074 178 77 are be VBP 10_1101-2020_09_09_289074 178 78 , , , 10_1101-2020_09_09_289074 178 79 finally finally RB 10_1101-2020_09_09_289074 178 80 , , , 10_1101-2020_09_09_289074 178 81 selected select VBN 10_1101-2020_09_09_289074 178 82 taking take VBG 10_1101-2020_09_09_289074 178 83 into into IN 10_1101-2020_09_09_289074 178 84 account account NN 10_1101-2020_09_09_289074 178 85 an an DT 10_1101-2020_09_09_289074 178 86 energy energy NN 10_1101-2020_09_09_289074 178 87 cutoff cutoff NN 10_1101-2020_09_09_289074 178 88 15 15 CD 10_1101-2020_09_09_289074 178 89 % % NN 10_1101-2020_09_09_289074 178 90 above above IN 10_1101-2020_09_09_289074 178 91 the the DT 10_1101-2020_09_09_289074 178 92 global global JJ 10_1101-2020_09_09_289074 178 93 minimum minimum NN 10_1101-2020_09_09_289074 178 94 . . . 10_1101-2020_09_09_289074 179 1 Supplementary supplementary JJ 10_1101-2020_09_09_289074 179 2 figures figure NNS 10_1101-2020_09_09_289074 179 3 focusing focus VBG 10_1101-2020_09_09_289074 179 4 on on IN 10_1101-2020_09_09_289074 179 5 the the DT 10_1101-2020_09_09_289074 179 6 most most RBS 10_1101-2020_09_09_289074 179 7 relevant relevant JJ 10_1101-2020_09_09_289074 179 8 mutation mutation NN 10_1101-2020_09_09_289074 179 9 are be VBP 10_1101-2020_09_09_289074 179 10 available available JJ 10_1101-2020_09_09_289074 179 11 in in IN 10_1101-2020_09_09_289074 179 12 Supplementary Supplementary NNP 10_1101-2020_09_09_289074 179 13 File File NNP 10_1101-2020_09_09_289074 179 14 3 3 CD 10_1101-2020_09_09_289074 179 15 . . . 10_1101-2020_09_09_289074 180 1 Before before IN 10_1101-2020_09_09_289074 180 2 starting start VBG 10_1101-2020_09_09_289074 180 3 the the DT 10_1101-2020_09_09_289074 180 4 GBPM GBPM NNP 10_1101-2020_09_09_289074 180 5 analysis analysis NN 10_1101-2020_09_09_289074 180 6 , , , 10_1101-2020_09_09_289074 180 7 co co JJ 10_1101-2020_09_09_289074 180 8 - - JJ 10_1101-2020_09_09_289074 180 9 crystalized crystalized JJ 10_1101-2020_09_09_289074 180 10 water water NN 10_1101-2020_09_09_289074 180 11 molecules molecule NNS 10_1101-2020_09_09_289074 180 12 were be VBD 10_1101-2020_09_09_289074 180 13 removed remove VBN 10_1101-2020_09_09_289074 180 14 from from IN 10_1101-2020_09_09_289074 180 15 PDB PDB NNP 10_1101-2020_09_09_289074 180 16 structures structure NNS 10_1101-2020_09_09_289074 180 17 . . . 10_1101-2020_09_09_289074 181 1 In in IN 10_1101-2020_09_09_289074 181 2 6VW1 6vw1 CD 10_1101-2020_09_09_289074 181 3 , , , 10_1101-2020_09_09_289074 181 4 showing show VBG 10_1101-2020_09_09_289074 181 5 two two CD 10_1101-2020_09_09_289074 181 6 Spike Spike NNP 10_1101-2020_09_09_289074 181 7 - - HYPH 10_1101-2020_09_09_289074 181 8 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 181 9 complexes complex NNS 10_1101-2020_09_09_289074 181 10 , , , 10_1101-2020_09_09_289074 181 11 namely namely RB 10_1101-2020_09_09_289074 181 12 chains chain VBZ 10_1101-2020_09_09_289074 181 13 A a NN 10_1101-2020_09_09_289074 181 14 - - HYPH 10_1101-2020_09_09_289074 181 15 E e NN 10_1101-2020_09_09_289074 181 16 and and CC 10_1101-2020_09_09_289074 181 17 B B NNP 10_1101-2020_09_09_289074 181 18 - - HYPH 10_1101-2020_09_09_289074 181 19 F F NNP 10_1101-2020_09_09_289074 181 20 , , , 10_1101-2020_09_09_289074 181 21 both both DT 10_1101-2020_09_09_289074 181 22 structures structure NNS 10_1101-2020_09_09_289074 181 23 have have VBP 10_1101-2020_09_09_289074 181 24 been be VBN 10_1101-2020_09_09_289074 181 25 investigated investigate VBN 10_1101-2020_09_09_289074 181 26 and and CC 10_1101-2020_09_09_289074 181 27 further further RB 10_1101-2020_09_09_289074 181 28 reported report VBN 10_1101-2020_09_09_289074 181 29 as as IN 10_1101-2020_09_09_289074 181 30 model model NN 10_1101-2020_09_09_289074 181 31 A a NN 10_1101-2020_09_09_289074 181 32 and and CC 10_1101-2020_09_09_289074 181 33 B b NN 10_1101-2020_09_09_289074 181 34 , , , 10_1101-2020_09_09_289074 181 35 respectively respectively RB 10_1101-2020_09_09_289074 181 36 . . . 10_1101-2020_09_09_289074 182 1 All all DT 10_1101-2020_09_09_289074 182 2 selected select VBN 10_1101-2020_09_09_289074 182 3 complexes complex NNS 10_1101-2020_09_09_289074 182 4 have have VBP 10_1101-2020_09_09_289074 182 5 been be VBN 10_1101-2020_09_09_289074 182 6 conformationally conformationally RB 10_1101-2020_09_09_289074 182 7 compared compare VBN 10_1101-2020_09_09_289074 182 8 one one CD 10_1101-2020_09_09_289074 182 9 each each DT 10_1101-2020_09_09_289074 182 10 other other JJ 10_1101-2020_09_09_289074 182 11 by by IN 10_1101-2020_09_09_289074 182 12 alignment alignment NN 10_1101-2020_09_09_289074 182 13 and and CC 10_1101-2020_09_09_289074 182 14 computing compute VBG 10_1101-2020_09_09_289074 182 15 the the DT 10_1101-2020_09_09_289074 182 16 RMSd RMSd NNS 10_1101-2020_09_09_289074 182 17 on on IN 10_1101-2020_09_09_289074 182 18 the the DT 10_1101-2020_09_09_289074 182 19 cartesian cartesian JJ 10_1101-2020_09_09_289074 182 20 coordinates coordinate NNS 10_1101-2020_09_09_289074 182 21 of of IN 10_1101-2020_09_09_289074 182 22 equivalent equivalent JJ 10_1101-2020_09_09_289074 182 23 not not RB 10_1101-2020_09_09_289074 182 24 hydrogen hydrogen NN 10_1101-2020_09_09_289074 182 25 atoms atom NNS 10_1101-2020_09_09_289074 182 26 . . . 10_1101-2020_09_09_289074 183 1 DRY DRY NNP 10_1101-2020_09_09_289074 183 2 , , , 10_1101-2020_09_09_289074 183 3 N1 n1 NN 10_1101-2020_09_09_289074 183 4 and and CC 10_1101-2020_09_09_289074 183 5 O o UH 10_1101-2020_09_09_289074 183 6 original original JJ 10_1101-2020_09_09_289074 183 7 GRID GRID NNP 10_1101-2020_09_09_289074 183 8 probes probe NNS 10_1101-2020_09_09_289074 183 9 have have VBP 10_1101-2020_09_09_289074 183 10 been be VBN 10_1101-2020_09_09_289074 183 11 used use VBN 10_1101-2020_09_09_289074 183 12 to to TO 10_1101-2020_09_09_289074 183 13 highlight highlight VB 10_1101-2020_09_09_289074 183 14 hydrophobic hydrophobic NN 10_1101-2020_09_09_289074 183 15 , , , 10_1101-2020_09_09_289074 183 16 hydrogen hydrogen NNP 10_1101-2020_09_09_289074 183 17 bond bond NN 10_1101-2020_09_09_289074 183 18 donors donor NNS 10_1101-2020_09_09_289074 183 19 and and CC 10_1101-2020_09_09_289074 183 20 acceptors acceptor NNS 10_1101-2020_09_09_289074 183 21 areas area NNS 10_1101-2020_09_09_289074 183 22 . . . 10_1101-2020_09_09_289074 184 1 In in IN 10_1101-2020_09_09_289074 184 2 order order NN 10_1101-2020_09_09_289074 184 3 to to TO 10_1101-2020_09_09_289074 184 4 identify identify VB 10_1101-2020_09_09_289074 184 5 the the DT 10_1101-2020_09_09_289074 184 6 most most RBS 10_1101-2020_09_09_289074 184 7 relevant relevant JJ 10_1101-2020_09_09_289074 184 8 residues residue NNS 10_1101-2020_09_09_289074 184 9 of of IN 10_1101-2020_09_09_289074 184 10 both both CC 10_1101-2020_09_09_289074 184 11 Spike Spike NNP 10_1101-2020_09_09_289074 184 12 and and CC 10_1101-2020_09_09_289074 184 13 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 184 14 , , , 10_1101-2020_09_09_289074 184 15 we -PRON- PRP 10_1101-2020_09_09_289074 184 16 conceptually conceptually RB 10_1101-2020_09_09_289074 184 17 and and CC 10_1101-2020_09_09_289074 184 18 technically technically RB 10_1101-2020_09_09_289074 184 19 extended extend VBD 10_1101-2020_09_09_289074 184 20 the the DT 10_1101-2020_09_09_289074 184 21 GBPM GBPM NNP 10_1101-2020_09_09_289074 184 22 algorithm algorithm NN 10_1101-2020_09_09_289074 184 23 , , , 10_1101-2020_09_09_289074 184 24 originally originally RB 10_1101-2020_09_09_289074 184 25 designed design VBN 10_1101-2020_09_09_289074 184 26 for for IN 10_1101-2020_09_09_289074 184 27 drug drug NN 10_1101-2020_09_09_289074 184 28 / / SYM 10_1101-2020_09_09_289074 184 29 target target NN 10_1101-2020_09_09_289074 184 30 interactions interaction NNS 10_1101-2020_09_09_289074 184 31 ( ( -LRB- 10_1101-2020_09_09_289074 184 32 28 28 CD 10_1101-2020_09_09_289074 184 33 ) ) -RRB- 10_1101-2020_09_09_289074 184 34 . . . 10_1101-2020_09_09_289074 185 1 In in IN 10_1101-2020_09_09_289074 185 2 the the DT 10_1101-2020_09_09_289074 185 3 GBPM GBPM NNP 10_1101-2020_09_09_289074 185 4 analysis analysis NN 10_1101-2020_09_09_289074 185 5 presented present VBN 10_1101-2020_09_09_289074 185 6 here here RB 10_1101-2020_09_09_289074 185 7 , , , 10_1101-2020_09_09_289074 185 8 the the DT 10_1101-2020_09_09_289074 185 9 two two CD 10_1101-2020_09_09_289074 185 10 interacting interact VBG 10_1101-2020_09_09_289074 185 11 proteins protein NNS 10_1101-2020_09_09_289074 185 12 have have VBP 10_1101-2020_09_09_289074 185 13 been be VBN 10_1101-2020_09_09_289074 185 14 considered consider VBN 10_1101-2020_09_09_289074 185 15 either either CC 10_1101-2020_09_09_289074 185 16 as as IN 10_1101-2020_09_09_289074 185 17 host host NN 10_1101-2020_09_09_289074 185 18 and and CC 10_1101-2020_09_09_289074 185 19 guest guest NN 10_1101-2020_09_09_289074 185 20 units unit NNS 10_1101-2020_09_09_289074 185 21 , , , 10_1101-2020_09_09_289074 185 22 and and CC 10_1101-2020_09_09_289074 185 23 relevant relevant JJ 10_1101-2020_09_09_289074 185 24 AAs aa NNS 10_1101-2020_09_09_289074 185 25 were be VBD 10_1101-2020_09_09_289074 185 26 selected select VBN 10_1101-2020_09_09_289074 185 27 if if IN 10_1101-2020_09_09_289074 185 28 their -PRON- PRP$ 10_1101-2020_09_09_289074 185 29 distance distance NN 10_1101-2020_09_09_289074 185 30 from from IN 10_1101-2020_09_09_289074 185 31 GBPM GBPM NNP 10_1101-2020_09_09_289074 185 32 features feature NNS 10_1101-2020_09_09_289074 185 33 was be VBD 10_1101-2020_09_09_289074 185 34 lower low JJR 10_1101-2020_09_09_289074 185 35 or or CC 10_1101-2020_09_09_289074 185 36 equal equal JJ 10_1101-2020_09_09_289074 185 37 to to IN 10_1101-2020_09_09_289074 185 38 3 3 CD 10_1101-2020_09_09_289074 185 39 Å. å. NN 10_1101-2020_09_09_289074 186 1 For for IN 10_1101-2020_09_09_289074 186 2 each each DT 10_1101-2020_09_09_289074 186 3 PDB PDB NNP 10_1101-2020_09_09_289074 186 4 model model NN 10_1101-2020_09_09_289074 186 5 , , , 10_1101-2020_09_09_289074 186 6 the the DT 10_1101-2020_09_09_289074 186 7 selected select VBN 10_1101-2020_09_09_289074 186 8 residues residue NNS 10_1101-2020_09_09_289074 186 9 were be VBD 10_1101-2020_09_09_289074 186 10 scored score VBN 10_1101-2020_09_09_289074 186 11 as as IN 10_1101-2020_09_09_289074 186 12 summa summa JJR 10_1101-2020_09_09_289074 186 13 of of IN 10_1101-2020_09_09_289074 186 14 the the DT 10_1101-2020_09_09_289074 186 15 corresponding correspond VBG 10_1101-2020_09_09_289074 186 16 GBPM GBPM NNP 10_1101-2020_09_09_289074 186 17 features feature VBZ 10_1101-2020_09_09_289074 186 18 interaction interaction NN 10_1101-2020_09_09_289074 186 19 energy energy NN 10_1101-2020_09_09_289074 186 20 . . . 10_1101-2020_09_09_289074 187 1 In in IN 10_1101-2020_09_09_289074 187 2 order order NN 10_1101-2020_09_09_289074 187 3 to to TO 10_1101-2020_09_09_289074 187 4 prevent prevent VB 10_1101-2020_09_09_289074 187 5 unrealistic unrealistic JJ 10_1101-2020_09_09_289074 187 6 distortion distortion NN 10_1101-2020_09_09_289074 187 7 of of IN 10_1101-2020_09_09_289074 187 8 the the DT 10_1101-2020_09_09_289074 187 9 Spike Spike NNP 10_1101-2020_09_09_289074 187 10 - - HYPH 10_1101-2020_09_09_289074 187 11 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 187 12 complex complex NN 10_1101-2020_09_09_289074 187 13 , , , 10_1101-2020_09_09_289074 187 14 due due JJ 10_1101-2020_09_09_289074 187 15 the the DT 10_1101-2020_09_09_289074 187 16 usage usage NN 10_1101-2020_09_09_289074 187 17 of of IN 10_1101-2020_09_09_289074 187 18 structures structure NNS 10_1101-2020_09_09_289074 187 19 not not RB 10_1101-2020_09_09_289074 187 20 covering cover VBG 10_1101-2020_09_09_289074 187 21 the the DT 10_1101-2020_09_09_289074 187 22 full full JJ 10_1101-2020_09_09_289074 187 23 length length NN 10_1101-2020_09_09_289074 187 24 of of IN 10_1101-2020_09_09_289074 187 25 the the DT 10_1101-2020_09_09_289074 187 26 interacting interact VBG 10_1101-2020_09_09_289074 187 27 proteins protein NNS 10_1101-2020_09_09_289074 187 28 , , , 10_1101-2020_09_09_289074 187 29 the the DT 10_1101-2020_09_09_289074 187 30 mutations mutation NNS 10_1101-2020_09_09_289074 187 31 effect effect NN 10_1101-2020_09_09_289074 187 32 has have VBZ 10_1101-2020_09_09_289074 187 33 been be VBN 10_1101-2020_09_09_289074 187 34 qualitatively qualitatively RB 10_1101-2020_09_09_289074 187 35 estimated estimate VBN 10_1101-2020_09_09_289074 187 36 by by IN 10_1101-2020_09_09_289074 187 37 means mean NNS 10_1101-2020_09_09_289074 187 38 of of IN 10_1101-2020_09_09_289074 187 39 the the DT 10_1101-2020_09_09_289074 187 40 mutagenesis mutagenesis NN 10_1101-2020_09_09_289074 187 41 tool tool NN 10_1101-2020_09_09_289074 187 42 implemented implement VBN 10_1101-2020_09_09_289074 187 43 in in IN 10_1101-2020_09_09_289074 187 44 PyMol PyMol NNP 10_1101-2020_09_09_289074 187 45 software software NN 10_1101-2020_09_09_289074 187 46 ( ( -LRB- 10_1101-2020_09_09_289074 187 47 48 48 CD 10_1101-2020_09_09_289074 187 48 ) ) -RRB- 10_1101-2020_09_09_289074 187 49 . . . 10_1101-2020_09_09_289074 188 1 Wild wild JJ 10_1101-2020_09_09_289074 188 2 type type NN 10_1101-2020_09_09_289074 188 3 residues residue NNS 10_1101-2020_09_09_289074 188 4 have have VBP 10_1101-2020_09_09_289074 188 5 been be VBN 10_1101-2020_09_09_289074 188 6 replaced replace VBN 10_1101-2020_09_09_289074 188 7 by by IN 10_1101-2020_09_09_289074 188 8 the the DT 10_1101-2020_09_09_289074 188 9 mutation mutation NN 10_1101-2020_09_09_289074 188 10 and and CC 10_1101-2020_09_09_289074 188 11 the the DT 10_1101-2020_09_09_289074 188 12 new new JJ 10_1101-2020_09_09_289074 188 13 sidechain sidechain JJ 10_1101-2020_09_09_289074 188 14 conformations conformation NNS 10_1101-2020_09_09_289074 188 15 have have VBP 10_1101-2020_09_09_289074 188 16 been be VBN 10_1101-2020_09_09_289074 188 17 optimized optimize VBN 10_1101-2020_09_09_289074 188 18 taking take VBG 10_1101-2020_09_09_289074 188 19 into into IN 10_1101-2020_09_09_289074 188 20 account account NN 10_1101-2020_09_09_289074 188 21 the the DT 10_1101-2020_09_09_289074 188 22 neighboring neighbor VBG 10_1101-2020_09_09_289074 188 23 AAs aa NNS 10_1101-2020_09_09_289074 188 24 . . . 10_1101-2020_09_09_289074 189 1 The the DT 10_1101-2020_09_09_289074 189 2 graphical graphical JJ 10_1101-2020_09_09_289074 189 3 analysis analysis NN 10_1101-2020_09_09_289074 189 4 was be VBD 10_1101-2020_09_09_289074 189 5 carried carry VBN 10_1101-2020_09_09_289074 189 6 out out RP 10_1101-2020_09_09_289074 189 7 onto onto IN 10_1101-2020_09_09_289074 189 8 the the DT 10_1101-2020_09_09_289074 189 9 predicted predict VBN 10_1101-2020_09_09_289074 189 10 most most RBS 10_1101-2020_09_09_289074 189 11 populated populated JJ 10_1101-2020_09_09_289074 189 12 rotamers rotamer NNS 10_1101-2020_09_09_289074 189 13 . . . 10_1101-2020_09_09_289074 190 1 On on IN 10_1101-2020_09_09_289074 190 2 the the DT 10_1101-2020_09_09_289074 190 3 basis basis NN 10_1101-2020_09_09_289074 190 4 of of IN 10_1101-2020_09_09_289074 190 5 its -PRON- PRP$ 10_1101-2020_09_09_289074 190 6 better well JJR 10_1101-2020_09_09_289074 190 7 X x NN 10_1101-2020_09_09_289074 190 8 - - NN 10_1101-2020_09_09_289074 190 9 ray ray NN 10_1101-2020_09_09_289074 190 10 resolution resolution NN 10_1101-2020_09_09_289074 190 11 , , , 10_1101-2020_09_09_289074 190 12 the the DT 10_1101-2020_09_09_289074 190 13 6M0J 6m0j CD 10_1101-2020_09_09_289074 190 14 PDB PDB NNP 10_1101-2020_09_09_289074 190 15 structure structure NN 10_1101-2020_09_09_289074 190 16 has have VBZ 10_1101-2020_09_09_289074 190 17 been be VBN 10_1101-2020_09_09_289074 190 18 selected select VBN 10_1101-2020_09_09_289074 190 19 for for IN 10_1101-2020_09_09_289074 190 20 the the DT 10_1101-2020_09_09_289074 190 21 above above RB 10_1101-2020_09_09_289074 190 22 reported report VBN 10_1101-2020_09_09_289074 190 23 investigation investigation NN 10_1101-2020_09_09_289074 190 24 . . . 10_1101-2020_09_09_289074 191 1 Genetical genetical JJ 10_1101-2020_09_09_289074 191 2 analysis analysis NN 10_1101-2020_09_09_289074 191 3 SARS SARS NNP 10_1101-2020_09_09_289074 191 4 - - HYPH 10_1101-2020_09_09_289074 191 5 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 191 6 genome genome JJ 10_1101-2020_09_09_289074 191 7 sequences sequence NNS 10_1101-2020_09_09_289074 191 8 from from IN 10_1101-2020_09_09_289074 191 9 human human JJ 10_1101-2020_09_09_289074 191 10 hosts host NNS 10_1101-2020_09_09_289074 191 11 and and CC 10_1101-2020_09_09_289074 191 12 accounting account VBG 10_1101-2020_09_09_289074 191 13 for for IN 10_1101-2020_09_09_289074 191 14 a a DT 10_1101-2020_09_09_289074 191 15 total total NN 10_1101-2020_09_09_289074 191 16 of of IN 10_1101-2020_09_09_289074 191 17 145,201 145,201 CD 10_1101-2020_09_09_289074 191 18 submissions submission NNS 10_1101-2020_09_09_289074 191 19 were be VBD 10_1101-2020_09_09_289074 191 20 obtained obtain VBN 10_1101-2020_09_09_289074 191 21 from from IN 10_1101-2020_09_09_289074 191 22 the the DT 10_1101-2020_09_09_289074 191 23 GISAID GISAID NNP 10_1101-2020_09_09_289074 191 24 database database NN 10_1101-2020_09_09_289074 191 25 on on IN 10_1101-2020_09_09_289074 191 26 15 15 CD 10_1101-2020_09_09_289074 191 27 October October NNP 10_1101-2020_09_09_289074 191 28 2020 2020 CD 10_1101-2020_09_09_289074 191 29 ( ( -LRB- 10_1101-2020_09_09_289074 191 30 29 29 CD 10_1101-2020_09_09_289074 191 31 ) ) -RRB- 10_1101-2020_09_09_289074 191 32 . . . 10_1101-2020_09_09_289074 192 1 Low low JJ 10_1101-2020_09_09_289074 192 2 quality quality NN 10_1101-2020_09_09_289074 192 3 ( ( -LRB- 10_1101-2020_09_09_289074 192 4 with with IN 10_1101-2020_09_09_289074 192 5 more more JJR 10_1101-2020_09_09_289074 192 6 than than IN 10_1101-2020_09_09_289074 192 7 5 5 CD 10_1101-2020_09_09_289074 192 8 % % NN 10_1101-2020_09_09_289074 192 9 uncharacterized uncharacterized JJ 10_1101-2020_09_09_289074 192 10 nucleotides nucleotide NNS 10_1101-2020_09_09_289074 192 11 ) ) -RRB- 10_1101-2020_09_09_289074 192 12 and and CC 10_1101-2020_09_09_289074 192 13 incomplete incomplete JJ 10_1101-2020_09_09_289074 192 14 ( ( -LRB- 10_1101-2020_09_09_289074 192 15 < < XX 10_1101-2020_09_09_289074 192 16 29,000 29,000 CD 10_1101-2020_09_09_289074 192 17 nucleotides nucleotide NNS 10_1101-2020_09_09_289074 192 18 , , , 10_1101-2020_09_09_289074 192 19 based base VBN 10_1101-2020_09_09_289074 192 20 on on IN 10_1101-2020_09_09_289074 192 21 a a DT 10_1101-2020_09_09_289074 192 22 total total JJ 10_1101-2020_09_09_289074 192 23 reference reference NN 10_1101-2020_09_09_289074 192 24 length length NN 10_1101-2020_09_09_289074 192 25 of of IN 10_1101-2020_09_09_289074 192 26 29,903 29,903 CD 10_1101-2020_09_09_289074 192 27 ) ) -RRB- 10_1101-2020_09_09_289074 192 28 sequences sequence NNS 10_1101-2020_09_09_289074 192 29 were be VBD 10_1101-2020_09_09_289074 192 30 removed remove VBN 10_1101-2020_09_09_289074 192 31 . . . 10_1101-2020_09_09_289074 193 1 The the DT 10_1101-2020_09_09_289074 193 2 resulting result VBG 10_1101-2020_09_09_289074 193 3 135,591 135,591 CD 10_1101-2020_09_09_289074 193 4 genome genome NN 10_1101-2020_09_09_289074 193 5 sequences sequence NNS 10_1101-2020_09_09_289074 193 6 were be VBD 10_1101-2020_09_09_289074 193 7 aligned align VBN 10_1101-2020_09_09_289074 193 8 on on IN 10_1101-2020_09_09_289074 193 9 the the DT 10_1101-2020_09_09_289074 193 10 reference reference NN 10_1101-2020_09_09_289074 193 11 SARS SARS NNP 10_1101-2020_09_09_289074 193 12 - - HYPH 10_1101-2020_09_09_289074 193 13 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 193 14 Wuhan Wuhan NNP 10_1101-2020_09_09_289074 193 15 genome genome NNP 10_1101-2020_09_09_289074 193 16 ( ( -LRB- 10_1101-2020_09_09_289074 193 17 NCBI NCBI NNP 10_1101-2020_09_09_289074 193 18 entry entry NN 10_1101-2020_09_09_289074 193 19 NC_045512.2 NC_045512.2 NNP 10_1101-2020_09_09_289074 193 20 ) ) -RRB- 10_1101-2020_09_09_289074 193 21 using use VBG 10_1101-2020_09_09_289074 193 22 the the DT 10_1101-2020_09_09_289074 193 23 NUCMER NUCMER NNP 10_1101-2020_09_09_289074 193 24 algorithm algorithm NN 10_1101-2020_09_09_289074 193 25 ( ( -LRB- 10_1101-2020_09_09_289074 193 26 49 49 CD 10_1101-2020_09_09_289074 193 27 ) ) -RRB- 10_1101-2020_09_09_289074 193 28 . . . 10_1101-2020_09_09_289074 194 1 Position position NN 10_1101-2020_09_09_289074 194 2 - - HYPH 10_1101-2020_09_09_289074 194 3 specific specific JJ 10_1101-2020_09_09_289074 194 4 nucleotide nucleotide JJ 10_1101-2020_09_09_289074 194 5 differences difference NNS 10_1101-2020_09_09_289074 194 6 were be VBD 10_1101-2020_09_09_289074 194 7 merged merge VBN 10_1101-2020_09_09_289074 194 8 for for IN 10_1101-2020_09_09_289074 194 9 neighboring neighbor VBG 10_1101-2020_09_09_289074 194 10 events event NNS 10_1101-2020_09_09_289074 194 11 and and CC 10_1101-2020_09_09_289074 194 12 converted convert VBN 10_1101-2020_09_09_289074 194 13 into into IN 10_1101-2020_09_09_289074 194 14 protein protein NN 10_1101-2020_09_09_289074 194 15 mutations mutation NNS 10_1101-2020_09_09_289074 194 16 using use VBG 10_1101-2020_09_09_289074 194 17 the the DT 10_1101-2020_09_09_289074 194 18 coronapp coronapp NNP 10_1101-2020_09_09_289074 194 19 annotator annotator NN 10_1101-2020_09_09_289074 194 20 ( ( -LRB- 10_1101-2020_09_09_289074 194 21 17 17 CD 10_1101-2020_09_09_289074 194 22 ) ) -RRB- 10_1101-2020_09_09_289074 194 23 . . . 10_1101-2020_09_09_289074 195 1 The the DT 10_1101-2020_09_09_289074 195 2 results result NNS 10_1101-2020_09_09_289074 195 3 were be VBD 10_1101-2020_09_09_289074 195 4 further further RB 10_1101-2020_09_09_289074 195 5 filtered filter VBN 10_1101-2020_09_09_289074 195 6 for for IN 10_1101-2020_09_09_289074 195 7 AA- aa- NN 10_1101-2020_09_09_289074 195 8 changing change VBG 10_1101-2020_09_09_289074 195 9 mutations mutation NNS 10_1101-2020_09_09_289074 195 10 targeting target VBG 10_1101-2020_09_09_289074 195 11 the the DT 10_1101-2020_09_09_289074 195 12 Spike Spike NNP 10_1101-2020_09_09_289074 195 13 protein protein NN 10_1101-2020_09_09_289074 195 14 . . . 10_1101-2020_09_09_289074 196 1 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 196 2 variants variant NNS 10_1101-2020_09_09_289074 196 3 in in IN 10_1101-2020_09_09_289074 196 4 the the DT 10_1101-2020_09_09_289074 196 5 human human JJ 10_1101-2020_09_09_289074 196 6 population population NN 10_1101-2020_09_09_289074 196 7 were be VBD 10_1101-2020_09_09_289074 196 8 extracted extract VBN 10_1101-2020_09_09_289074 196 9 from from IN 10_1101-2020_09_09_289074 196 10 the the DT 10_1101-2020_09_09_289074 196 11 gnomAD gnomAD NNP 10_1101-2020_09_09_289074 196 12 database database NN 10_1101-2020_09_09_289074 196 13 , , , 10_1101-2020_09_09_289074 196 14 v3 v3 NN 10_1101-2020_09_09_289074 196 15 , , , 10_1101-2020_09_09_289074 196 16 18 18 CD 10_1101-2020_09_09_289074 196 17 July July NNP 10_1101-2020_09_09_289074 196 18 2020 2020 CD 10_1101-2020_09_09_289074 196 19 ( ( -LRB- 10_1101-2020_09_09_289074 196 20 50 50 CD 10_1101-2020_09_09_289074 196 21 ) ) -RRB- 10_1101-2020_09_09_289074 196 22 . . . 10_1101-2020_09_09_289074 197 1 We -PRON- PRP 10_1101-2020_09_09_289074 197 2 considered consider VBD 10_1101-2020_09_09_289074 197 3 only only RB 10_1101-2020_09_09_289074 197 4 missense missense NN 10_1101-2020_09_09_289074 197 5 variants variant NNS 10_1101-2020_09_09_289074 197 6 affecting affect VBG 10_1101-2020_09_09_289074 197 7 specific specific JJ 10_1101-2020_09_09_289074 197 8 AAs aa NNS 10_1101-2020_09_09_289074 197 9 in in IN 10_1101-2020_09_09_289074 197 10 the the DT 10_1101-2020_09_09_289074 197 11 protein protein NN 10_1101-2020_09_09_289074 197 12 sequence sequence NN 10_1101-2020_09_09_289074 197 13 , , , 10_1101-2020_09_09_289074 197 14 for for IN 10_1101-2020_09_09_289074 197 15 a a DT 10_1101-2020_09_09_289074 197 16 total total NN 10_1101-2020_09_09_289074 197 17 of of IN 10_1101-2020_09_09_289074 197 18 155 155 CD 10_1101-2020_09_09_289074 197 19 entries entry NNS 10_1101-2020_09_09_289074 197 20 ( ( -LRB- 10_1101-2020_09_09_289074 197 21 Supplementary Supplementary NNP 10_1101-2020_09_09_289074 197 22 File File NNP 10_1101-2020_09_09_289074 197 23 2 2 CD 10_1101-2020_09_09_289074 197 24 ) ) -RRB- 10_1101-2020_09_09_289074 197 25 . . . 10_1101-2020_09_09_289074 198 1 Graph graph NN 10_1101-2020_09_09_289074 198 2 generation generation NN 10_1101-2020_09_09_289074 198 3 was be VBD 10_1101-2020_09_09_289074 198 4 performed perform VBN 10_1101-2020_09_09_289074 198 5 with with IN 10_1101-2020_09_09_289074 198 6 the the DT 10_1101-2020_09_09_289074 198 7 R r JJ 10_1101-2020_09_09_289074 198 8 statistical statistical JJ 10_1101-2020_09_09_289074 198 9 software software NN 10_1101-2020_09_09_289074 198 10 and and CC 10_1101-2020_09_09_289074 198 11 the the DT 10_1101-2020_09_09_289074 198 12 corto corto NN 10_1101-2020_09_09_289074 198 13 package package NN 10_1101-2020_09_09_289074 198 14 v1.1.2 v1.1.2 NNP 10_1101-2020_09_09_289074 198 15 ( ( -LRB- 10_1101-2020_09_09_289074 198 16 51 51 CD 10_1101-2020_09_09_289074 198 17 ) ) -RRB- 10_1101-2020_09_09_289074 198 18 . . . 10_1101-2020_09_09_289074 199 1 .CC .CC NFP 10_1101-2020_09_09_289074 199 2 - - : 10_1101-2020_09_09_289074 199 3 BY by IN 10_1101-2020_09_09_289074 199 4 - - HYPH 10_1101-2020_09_09_289074 199 5 NC NC NNP 10_1101-2020_09_09_289074 199 6 - - HYPH 10_1101-2020_09_09_289074 199 7 ND ND NNP 10_1101-2020_09_09_289074 199 8 4.0 4.0 CD 10_1101-2020_09_09_289074 199 9 International International NNP 10_1101-2020_09_09_289074 199 10 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 199 11 under under IN 10_1101-2020_09_09_289074 199 12 a a DT 10_1101-2020_09_09_289074 199 13 ( ( -LRB- 10_1101-2020_09_09_289074 199 14 which which WDT 10_1101-2020_09_09_289074 199 15 was be VBD 10_1101-2020_09_09_289074 199 16 not not RB 10_1101-2020_09_09_289074 199 17 certified certify VBN 10_1101-2020_09_09_289074 199 18 by by IN 10_1101-2020_09_09_289074 199 19 peer peer NN 10_1101-2020_09_09_289074 199 20 review review NN 10_1101-2020_09_09_289074 199 21 ) ) -RRB- 10_1101-2020_09_09_289074 199 22 is be VBZ 10_1101-2020_09_09_289074 199 23 the the DT 10_1101-2020_09_09_289074 199 24 author author NN 10_1101-2020_09_09_289074 199 25 / / SYM 10_1101-2020_09_09_289074 199 26 funder funder NN 10_1101-2020_09_09_289074 199 27 , , , 10_1101-2020_09_09_289074 199 28 who who WP 10_1101-2020_09_09_289074 199 29 has have VBZ 10_1101-2020_09_09_289074 199 30 granted grant VBN 10_1101-2020_09_09_289074 199 31 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 199 32 a a DT 10_1101-2020_09_09_289074 199 33 license license NN 10_1101-2020_09_09_289074 199 34 to to TO 10_1101-2020_09_09_289074 199 35 display display VB 10_1101-2020_09_09_289074 199 36 the the DT 10_1101-2020_09_09_289074 199 37 preprint preprint NN 10_1101-2020_09_09_289074 199 38 in in IN 10_1101-2020_09_09_289074 199 39 perpetuity perpetuity NN 10_1101-2020_09_09_289074 199 40 . . . 10_1101-2020_09_09_289074 200 1 It -PRON- PRP 10_1101-2020_09_09_289074 200 2 is be VBZ 10_1101-2020_09_09_289074 200 3 made make VBN 10_1101-2020_09_09_289074 200 4 The the DT 10_1101-2020_09_09_289074 200 5 copyright copyright NN 10_1101-2020_09_09_289074 200 6 holder holder NN 10_1101-2020_09_09_289074 200 7 for for IN 10_1101-2020_09_09_289074 200 8 this this DT 10_1101-2020_09_09_289074 200 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 200 10 version version NN 10_1101-2020_09_09_289074 200 11 posted post VBD 10_1101-2020_09_09_289074 200 12 January January NNP 10_1101-2020_09_09_289074 200 13 5 5 CD 10_1101-2020_09_09_289074 200 14 , , , 10_1101-2020_09_09_289074 200 15 2021 2021 CD 10_1101-2020_09_09_289074 200 16 . . . 10_1101-2020_09_09_289074 200 17 ; ; : 10_1101-2020_09_09_289074 200 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 200 19 : : : 10_1101-2020_09_09_289074 200 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 200 21 preprint preprint NN 10_1101-2020_09_09_289074 200 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 200 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NN 10_1101-2020_09_09_289074 200 24 11 11 CD 10_1101-2020_09_09_289074 200 25 Acknowledgments acknowledgment NNS 10_1101-2020_09_09_289074 200 26 We -PRON- PRP 10_1101-2020_09_09_289074 200 27 thank thank VBP 10_1101-2020_09_09_289074 200 28 the the DT 10_1101-2020_09_09_289074 200 29 Italian Italian NNP 10_1101-2020_09_09_289074 200 30 Ministry Ministry NNP 10_1101-2020_09_09_289074 200 31 of of IN 10_1101-2020_09_09_289074 200 32 Education Education NNP 10_1101-2020_09_09_289074 200 33 and and CC 10_1101-2020_09_09_289074 200 34 Research Research NNP 10_1101-2020_09_09_289074 200 35 for for IN 10_1101-2020_09_09_289074 200 36 their -PRON- PRP$ 10_1101-2020_09_09_289074 200 37 financial financial JJ 10_1101-2020_09_09_289074 200 38 support support NN 10_1101-2020_09_09_289074 200 39 under under IN 10_1101-2020_09_09_289074 200 40 the the DT 10_1101-2020_09_09_289074 200 41 Montalcini Montalcini NNP 10_1101-2020_09_09_289074 200 42 initiative initiative NN 10_1101-2020_09_09_289074 200 43 . . . 10_1101-2020_09_09_289074 201 1 We -PRON- PRP 10_1101-2020_09_09_289074 201 2 thank thank VBP 10_1101-2020_09_09_289074 201 3 Prof. Prof. NNP 10_1101-2020_09_09_289074 201 4 Giovanni Giovanni NNP 10_1101-2020_09_09_289074 201 5 Perini Perini NNP 10_1101-2020_09_09_289074 201 6 for for IN 10_1101-2020_09_09_289074 201 7 his -PRON- PRP$ 10_1101-2020_09_09_289074 201 8 continued continued JJ 10_1101-2020_09_09_289074 201 9 support support NN 10_1101-2020_09_09_289074 201 10 and and CC 10_1101-2020_09_09_289074 201 11 scientific scientific JJ 10_1101-2020_09_09_289074 201 12 enthusiasm enthusiasm NN 10_1101-2020_09_09_289074 201 13 , , , 10_1101-2020_09_09_289074 201 14 Prof. Prof. NNP 10_1101-2020_09_09_289074 201 15 Massimo Massimo NNP 10_1101-2020_09_09_289074 201 16 Battistini Battistini NNP 10_1101-2020_09_09_289074 201 17 for for IN 10_1101-2020_09_09_289074 201 18 his -PRON- PRP$ 10_1101-2020_09_09_289074 201 19 lessons lesson NNS 10_1101-2020_09_09_289074 201 20 on on IN 10_1101-2020_09_09_289074 201 21 logic logic NN 10_1101-2020_09_09_289074 201 22 and and CC 10_1101-2020_09_09_289074 201 23 writing writing NN 10_1101-2020_09_09_289074 201 24 , , , 10_1101-2020_09_09_289074 201 25 Prof. Prof. NNP 10_1101-2020_09_09_289074 201 26 Elena Elena NNP 10_1101-2020_09_09_289074 201 27 Bacchelli Bacchelli NNP 10_1101-2020_09_09_289074 201 28 for for IN 10_1101-2020_09_09_289074 201 29 her -PRON- PRP$ 10_1101-2020_09_09_289074 201 30 suggestions suggestion NNS 10_1101-2020_09_09_289074 201 31 on on IN 10_1101-2020_09_09_289074 201 32 the the DT 10_1101-2020_09_09_289074 201 33 use use NN 10_1101-2020_09_09_289074 201 34 of of IN 10_1101-2020_09_09_289074 201 35 gnomAD gnomAD NNP 10_1101-2020_09_09_289074 201 36 , , , 10_1101-2020_09_09_289074 201 37 and and CC 10_1101-2020_09_09_289074 201 38 Prof. Prof. NNP 10_1101-2020_09_09_289074 201 39 Stefano Stefano NNP 10_1101-2020_09_09_289074 201 40 Alcaro Alcaro NNP 10_1101-2020_09_09_289074 201 41 who who WP 10_1101-2020_09_09_289074 201 42 provided provide VBD 10_1101-2020_09_09_289074 201 43 the the DT 10_1101-2020_09_09_289074 201 44 computational computational JJ 10_1101-2020_09_09_289074 201 45 resources resource NNS 10_1101-2020_09_09_289074 201 46 required require VBN 10_1101-2020_09_09_289074 201 47 by by IN 10_1101-2020_09_09_289074 201 48 the the DT 10_1101-2020_09_09_289074 201 49 GBPM GBPM NNP 10_1101-2020_09_09_289074 201 50 analysis analysis NN 10_1101-2020_09_09_289074 201 51 . . . 10_1101-2020_09_09_289074 202 1 Finally finally RB 10_1101-2020_09_09_289074 202 2 , , , 10_1101-2020_09_09_289074 202 3 we -PRON- PRP 10_1101-2020_09_09_289074 202 4 thank thank VBP 10_1101-2020_09_09_289074 202 5 Mr. Mr. NNP 10_1101-2020_09_09_289074 202 6 George George NNP 10_1101-2020_09_09_289074 202 7 Wolf Wolf NNP 10_1101-2020_09_09_289074 202 8 for for IN 10_1101-2020_09_09_289074 202 9 the the DT 10_1101-2020_09_09_289074 202 10 final final JJ 10_1101-2020_09_09_289074 202 11 proofreading proofreading NN 10_1101-2020_09_09_289074 202 12 the the DT 10_1101-2020_09_09_289074 202 13 manuscript manuscript NN 10_1101-2020_09_09_289074 202 14 . . . 10_1101-2020_09_09_289074 203 1 References reference NNS 10_1101-2020_09_09_289074 203 2 .CC .CC NFP 10_1101-2020_09_09_289074 203 3 - - HYPH 10_1101-2020_09_09_289074 203 4 BY by IN 10_1101-2020_09_09_289074 203 5 - - HYPH 10_1101-2020_09_09_289074 203 6 NC NC NNP 10_1101-2020_09_09_289074 203 7 - - HYPH 10_1101-2020_09_09_289074 203 8 ND ND NNP 10_1101-2020_09_09_289074 203 9 4.0 4.0 CD 10_1101-2020_09_09_289074 203 10 International International NNP 10_1101-2020_09_09_289074 203 11 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 203 12 under under IN 10_1101-2020_09_09_289074 203 13 a a DT 10_1101-2020_09_09_289074 203 14 ( ( -LRB- 10_1101-2020_09_09_289074 203 15 which which WDT 10_1101-2020_09_09_289074 203 16 was be VBD 10_1101-2020_09_09_289074 203 17 not not RB 10_1101-2020_09_09_289074 203 18 certified certify VBN 10_1101-2020_09_09_289074 203 19 by by IN 10_1101-2020_09_09_289074 203 20 peer peer NN 10_1101-2020_09_09_289074 203 21 review review NN 10_1101-2020_09_09_289074 203 22 ) ) -RRB- 10_1101-2020_09_09_289074 203 23 is be VBZ 10_1101-2020_09_09_289074 203 24 the the DT 10_1101-2020_09_09_289074 203 25 author author NN 10_1101-2020_09_09_289074 203 26 / / SYM 10_1101-2020_09_09_289074 203 27 funder funder NN 10_1101-2020_09_09_289074 203 28 , , , 10_1101-2020_09_09_289074 203 29 who who WP 10_1101-2020_09_09_289074 203 30 has have VBZ 10_1101-2020_09_09_289074 203 31 granted grant VBN 10_1101-2020_09_09_289074 203 32 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 203 33 a a DT 10_1101-2020_09_09_289074 203 34 license license NN 10_1101-2020_09_09_289074 203 35 to to TO 10_1101-2020_09_09_289074 203 36 display display VB 10_1101-2020_09_09_289074 203 37 the the DT 10_1101-2020_09_09_289074 203 38 preprint preprint NN 10_1101-2020_09_09_289074 203 39 in in IN 10_1101-2020_09_09_289074 203 40 perpetuity perpetuity NN 10_1101-2020_09_09_289074 203 41 . . . 10_1101-2020_09_09_289074 204 1 It -PRON- PRP 10_1101-2020_09_09_289074 204 2 is be VBZ 10_1101-2020_09_09_289074 204 3 made make VBN 10_1101-2020_09_09_289074 204 4 The the DT 10_1101-2020_09_09_289074 204 5 copyright copyright NN 10_1101-2020_09_09_289074 204 6 holder holder NN 10_1101-2020_09_09_289074 204 7 for for IN 10_1101-2020_09_09_289074 204 8 this this DT 10_1101-2020_09_09_289074 204 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 204 10 version version NN 10_1101-2020_09_09_289074 204 11 posted post VBD 10_1101-2020_09_09_289074 204 12 January January NNP 10_1101-2020_09_09_289074 204 13 5 5 CD 10_1101-2020_09_09_289074 204 14 , , , 10_1101-2020_09_09_289074 204 15 2021 2021 CD 10_1101-2020_09_09_289074 204 16 . . . 10_1101-2020_09_09_289074 204 17 ; ; : 10_1101-2020_09_09_289074 204 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 204 19 : : : 10_1101-2020_09_09_289074 204 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 204 21 preprint preprint NN 10_1101-2020_09_09_289074 204 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 ADD 10_1101-2020_09_09_289074 204 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ CD 10_1101-2020_09_09_289074 204 24 12 12 CD 10_1101-2020_09_09_289074 204 25 Figures figure NNS 10_1101-2020_09_09_289074 204 26 and and CC 10_1101-2020_09_09_289074 204 27 Tables Tables NNPS 10_1101-2020_09_09_289074 204 28 .CC .CC : 10_1101-2020_09_09_289074 204 29 - - HYPH 10_1101-2020_09_09_289074 204 30 BY by IN 10_1101-2020_09_09_289074 204 31 - - HYPH 10_1101-2020_09_09_289074 204 32 NC NC NNP 10_1101-2020_09_09_289074 204 33 - - HYPH 10_1101-2020_09_09_289074 204 34 ND ND NNP 10_1101-2020_09_09_289074 204 35 4.0 4.0 CD 10_1101-2020_09_09_289074 204 36 International International NNP 10_1101-2020_09_09_289074 204 37 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 204 38 under under IN 10_1101-2020_09_09_289074 204 39 a a DT 10_1101-2020_09_09_289074 204 40 ( ( -LRB- 10_1101-2020_09_09_289074 204 41 which which WDT 10_1101-2020_09_09_289074 204 42 was be VBD 10_1101-2020_09_09_289074 204 43 not not RB 10_1101-2020_09_09_289074 204 44 certified certify VBN 10_1101-2020_09_09_289074 204 45 by by IN 10_1101-2020_09_09_289074 204 46 peer peer NN 10_1101-2020_09_09_289074 204 47 review review NN 10_1101-2020_09_09_289074 204 48 ) ) -RRB- 10_1101-2020_09_09_289074 204 49 is be VBZ 10_1101-2020_09_09_289074 204 50 the the DT 10_1101-2020_09_09_289074 204 51 author author NN 10_1101-2020_09_09_289074 204 52 / / SYM 10_1101-2020_09_09_289074 204 53 funder funder NN 10_1101-2020_09_09_289074 204 54 , , , 10_1101-2020_09_09_289074 204 55 who who WP 10_1101-2020_09_09_289074 204 56 has have VBZ 10_1101-2020_09_09_289074 204 57 granted grant VBN 10_1101-2020_09_09_289074 204 58 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 204 59 a a DT 10_1101-2020_09_09_289074 204 60 license license NN 10_1101-2020_09_09_289074 204 61 to to TO 10_1101-2020_09_09_289074 204 62 display display VB 10_1101-2020_09_09_289074 204 63 the the DT 10_1101-2020_09_09_289074 204 64 preprint preprint NN 10_1101-2020_09_09_289074 204 65 in in IN 10_1101-2020_09_09_289074 204 66 perpetuity perpetuity NN 10_1101-2020_09_09_289074 204 67 . . . 10_1101-2020_09_09_289074 205 1 It -PRON- PRP 10_1101-2020_09_09_289074 205 2 is be VBZ 10_1101-2020_09_09_289074 205 3 made make VBN 10_1101-2020_09_09_289074 205 4 The the DT 10_1101-2020_09_09_289074 205 5 copyright copyright NN 10_1101-2020_09_09_289074 205 6 holder holder NN 10_1101-2020_09_09_289074 205 7 for for IN 10_1101-2020_09_09_289074 205 8 this this DT 10_1101-2020_09_09_289074 205 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 205 10 version version NN 10_1101-2020_09_09_289074 205 11 posted post VBD 10_1101-2020_09_09_289074 205 12 January January NNP 10_1101-2020_09_09_289074 205 13 5 5 CD 10_1101-2020_09_09_289074 205 14 , , , 10_1101-2020_09_09_289074 205 15 2021 2021 CD 10_1101-2020_09_09_289074 205 16 . . . 10_1101-2020_09_09_289074 205 17 ; ; : 10_1101-2020_09_09_289074 205 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 205 19 : : : 10_1101-2020_09_09_289074 205 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 205 21 preprint preprint NN 10_1101-2020_09_09_289074 205 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 ADD 10_1101-2020_09_09_289074 205 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ CD 10_1101-2020_09_09_289074 205 24 13 13 CD 10_1101-2020_09_09_289074 205 25 Figure figure NN 10_1101-2020_09_09_289074 205 26 1 1 CD 10_1101-2020_09_09_289074 205 27 . . . 10_1101-2020_09_09_289074 206 1 Conformational conformational JJ 10_1101-2020_09_09_289074 206 2 comparison comparison NN 10_1101-2020_09_09_289074 206 3 of of IN 10_1101-2020_09_09_289074 206 4 Spike Spike NNP 10_1101-2020_09_09_289074 206 5 - - HYPH 10_1101-2020_09_09_289074 206 6 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 206 7 PDB PDB NNP 10_1101-2020_09_09_289074 206 8 complexes complex NNS 10_1101-2020_09_09_289074 206 9 : : : 10_1101-2020_09_09_289074 206 10 ( ( -LRB- 10_1101-2020_09_09_289074 206 11 A a NN 10_1101-2020_09_09_289074 206 12 ) ) -RRB- 10_1101-2020_09_09_289074 206 13 alignment alignment NN 10_1101-2020_09_09_289074 206 14 of of IN 10_1101-2020_09_09_289074 206 15 PDB PDB NNP 10_1101-2020_09_09_289074 206 16 entries entry NNS 10_1101-2020_09_09_289074 206 17 , , , 10_1101-2020_09_09_289074 206 18 Spike Spike NNP 10_1101-2020_09_09_289074 206 19 and and CC 10_1101-2020_09_09_289074 206 20 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 206 21 are be VBP 10_1101-2020_09_09_289074 206 22 respectively respectively RB 10_1101-2020_09_09_289074 206 23 surrounded surround VBN 10_1101-2020_09_09_289074 206 24 by by IN 10_1101-2020_09_09_289074 206 25 cyan cyan NNP 10_1101-2020_09_09_289074 206 26 and and CC 10_1101-2020_09_09_289074 206 27 orange orange NNP 10_1101-2020_09_09_289074 206 28 fog fog NNP 10_1101-2020_09_09_289074 206 29 , , , 10_1101-2020_09_09_289074 206 30 and and CC 10_1101-2020_09_09_289074 206 31 ( ( -LRB- 10_1101-2020_09_09_289074 206 32 B b NN 10_1101-2020_09_09_289074 206 33 ) ) -RRB- 10_1101-2020_09_09_289074 206 34 bar bar NN 10_1101-2020_09_09_289074 206 35 graph graph NN 10_1101-2020_09_09_289074 206 36 showing show VBG 10_1101-2020_09_09_289074 206 37 RMSd RMSd NNS 10_1101-2020_09_09_289074 206 38 ( ( -LRB- 10_1101-2020_09_09_289074 206 39 in in IN 10_1101-2020_09_09_289074 206 40 Å å NN 10_1101-2020_09_09_289074 206 41 ) ) -RRB- 10_1101-2020_09_09_289074 206 42 computed compute VBD 10_1101-2020_09_09_289074 206 43 on on IN 10_1101-2020_09_09_289074 206 44 structures structure NNS 10_1101-2020_09_09_289074 206 45 aligned align VBN 10_1101-2020_09_09_289074 206 46 without without IN 10_1101-2020_09_09_289074 206 47 hydrogen hydrogen NN 10_1101-2020_09_09_289074 206 48 atoms atom NNS 10_1101-2020_09_09_289074 206 49 . . . 10_1101-2020_09_09_289074 207 1 0,00 0,00 NNP 10_1101-2020_09_09_289074 207 2 0,34 0,34 CD 10_1101-2020_09_09_289074 207 3 1,43 1,43 CD 10_1101-2020_09_09_289074 207 4 2,19 2,19 CD 10_1101-2020_09_09_289074 207 5 0,34 0,34 CD 10_1101-2020_09_09_289074 207 6 0,00 0,00 CD 10_1101-2020_09_09_289074 207 7 1,40 1,40 CD 10_1101-2020_09_09_289074 207 8 2,18 2,18 CD 10_1101-2020_09_09_289074 207 9 1,43 1,43 CD 10_1101-2020_09_09_289074 207 10 1,40 1,40 CD 10_1101-2020_09_09_289074 207 11 0,00 0,00 CD 10_1101-2020_09_09_289074 207 12 1,48 1,48 CD 10_1101-2020_09_09_289074 207 13 2,19 2,19 CD 10_1101-2020_09_09_289074 207 14 2,18 2,18 CD 10_1101-2020_09_09_289074 207 15 1,48 1,48 CD 10_1101-2020_09_09_289074 207 16 0,00 0,00 CD 10_1101-2020_09_09_289074 207 17 0,00 0,00 CD 10_1101-2020_09_09_289074 207 18 0,50 0,50 CD 10_1101-2020_09_09_289074 207 19 1,00 1,00 CD 10_1101-2020_09_09_289074 207 20 1,50 1,50 CD 10_1101-2020_09_09_289074 207 21 2,00 2,00 CD 10_1101-2020_09_09_289074 207 22 2,50 2,50 CD 10_1101-2020_09_09_289074 207 23 6LZG 6lzg NN 10_1101-2020_09_09_289074 207 24 6M0J 6m0j CD 10_1101-2020_09_09_289074 207 25 6VW1-A 6vw1-a NN 10_1101-2020_09_09_289074 207 26 6VW1-B 6vw1-b CD 10_1101-2020_09_09_289074 207 27 R r NN 10_1101-2020_09_09_289074 207 28 M m NN 10_1101-2020_09_09_289074 207 29 S s NN 10_1101-2020_09_09_289074 207 30 d d NN 10_1101-2020_09_09_289074 207 31 ( ( -LRB- 10_1101-2020_09_09_289074 207 32 Å å NN 10_1101-2020_09_09_289074 207 33 ) ) -RRB- 10_1101-2020_09_09_289074 207 34 PDB PDB NNP 10_1101-2020_09_09_289074 207 35 entries entrie VBZ 10_1101-2020_09_09_289074 207 36 6LZG 6lzg NN 10_1101-2020_09_09_289074 207 37 6M0J 6m0j CD 10_1101-2020_09_09_289074 207 38 6VW1-A 6vw1-a NN 10_1101-2020_09_09_289074 207 39 6VW1-BB 6vw1-bb CD 10_1101-2020_09_09_289074 207 40 A a NN 10_1101-2020_09_09_289074 207 41 .CC .CC : 10_1101-2020_09_09_289074 207 42 - - HYPH 10_1101-2020_09_09_289074 207 43 BY by IN 10_1101-2020_09_09_289074 207 44 - - HYPH 10_1101-2020_09_09_289074 207 45 NC NC NNP 10_1101-2020_09_09_289074 207 46 - - HYPH 10_1101-2020_09_09_289074 207 47 ND ND NNP 10_1101-2020_09_09_289074 207 48 4.0 4.0 CD 10_1101-2020_09_09_289074 207 49 International International NNP 10_1101-2020_09_09_289074 207 50 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 207 51 under under IN 10_1101-2020_09_09_289074 207 52 a a DT 10_1101-2020_09_09_289074 207 53 ( ( -LRB- 10_1101-2020_09_09_289074 207 54 which which WDT 10_1101-2020_09_09_289074 207 55 was be VBD 10_1101-2020_09_09_289074 207 56 not not RB 10_1101-2020_09_09_289074 207 57 certified certify VBN 10_1101-2020_09_09_289074 207 58 by by IN 10_1101-2020_09_09_289074 207 59 peer peer NN 10_1101-2020_09_09_289074 207 60 review review NN 10_1101-2020_09_09_289074 207 61 ) ) -RRB- 10_1101-2020_09_09_289074 207 62 is be VBZ 10_1101-2020_09_09_289074 207 63 the the DT 10_1101-2020_09_09_289074 207 64 author author NN 10_1101-2020_09_09_289074 207 65 / / SYM 10_1101-2020_09_09_289074 207 66 funder funder NN 10_1101-2020_09_09_289074 207 67 , , , 10_1101-2020_09_09_289074 207 68 who who WP 10_1101-2020_09_09_289074 207 69 has have VBZ 10_1101-2020_09_09_289074 207 70 granted grant VBN 10_1101-2020_09_09_289074 207 71 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 207 72 a a DT 10_1101-2020_09_09_289074 207 73 license license NN 10_1101-2020_09_09_289074 207 74 to to TO 10_1101-2020_09_09_289074 207 75 display display VB 10_1101-2020_09_09_289074 207 76 the the DT 10_1101-2020_09_09_289074 207 77 preprint preprint NN 10_1101-2020_09_09_289074 207 78 in in IN 10_1101-2020_09_09_289074 207 79 perpetuity perpetuity NN 10_1101-2020_09_09_289074 207 80 . . . 10_1101-2020_09_09_289074 208 1 It -PRON- PRP 10_1101-2020_09_09_289074 208 2 is be VBZ 10_1101-2020_09_09_289074 208 3 made make VBN 10_1101-2020_09_09_289074 208 4 The the DT 10_1101-2020_09_09_289074 208 5 copyright copyright NN 10_1101-2020_09_09_289074 208 6 holder holder NN 10_1101-2020_09_09_289074 208 7 for for IN 10_1101-2020_09_09_289074 208 8 this this DT 10_1101-2020_09_09_289074 208 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 208 10 version version NN 10_1101-2020_09_09_289074 208 11 posted post VBD 10_1101-2020_09_09_289074 208 12 January January NNP 10_1101-2020_09_09_289074 208 13 5 5 CD 10_1101-2020_09_09_289074 208 14 , , , 10_1101-2020_09_09_289074 208 15 2021 2021 CD 10_1101-2020_09_09_289074 208 16 . . . 10_1101-2020_09_09_289074 208 17 ; ; : 10_1101-2020_09_09_289074 208 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 208 19 : : : 10_1101-2020_09_09_289074 208 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 208 21 preprint preprint NN 10_1101-2020_09_09_289074 208 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 208 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NN 10_1101-2020_09_09_289074 208 24 14 14 CD 10_1101-2020_09_09_289074 208 25 Figure figure NN 10_1101-2020_09_09_289074 208 26 2 2 CD 10_1101-2020_09_09_289074 208 27 . . . 10_1101-2020_09_09_289074 209 1 Summary summary NN 10_1101-2020_09_09_289074 209 2 of of IN 10_1101-2020_09_09_289074 209 3 the the DT 10_1101-2020_09_09_289074 209 4 pipeline pipeline NN 10_1101-2020_09_09_289074 209 5 adopted adopt VBN 10_1101-2020_09_09_289074 209 6 by by IN 10_1101-2020_09_09_289074 209 7 GBPM GBPM NNP 10_1101-2020_09_09_289074 209 8 to to TO 10_1101-2020_09_09_289074 209 9 identify identify VB 10_1101-2020_09_09_289074 209 10 key key JJ 10_1101-2020_09_09_289074 209 11 residues residue NNS 10_1101-2020_09_09_289074 209 12 contributing contribute VBG 10_1101-2020_09_09_289074 209 13 to to IN 10_1101-2020_09_09_289074 209 14 the the DT 10_1101-2020_09_09_289074 209 15 SARS SARS NNP 10_1101-2020_09_09_289074 209 16 - - HYPH 10_1101-2020_09_09_289074 209 17 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 209 18 Spike Spike NNP 10_1101-2020_09_09_289074 209 19 / / SYM 10_1101-2020_09_09_289074 209 20 Human Human NNP 10_1101-2020_09_09_289074 209 21 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 209 22 interface interface NN 10_1101-2020_09_09_289074 209 23 . . . 10_1101-2020_09_09_289074 210 1 Spike Spike NNP 10_1101-2020_09_09_289074 210 2 is be VBZ 10_1101-2020_09_09_289074 210 3 depicted depict VBN 10_1101-2020_09_09_289074 210 4 in in IN 10_1101-2020_09_09_289074 210 5 cyan cyan NNP 10_1101-2020_09_09_289074 210 6 , , , 10_1101-2020_09_09_289074 210 7 and and CC 10_1101-2020_09_09_289074 210 8 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 210 9 in in IN 10_1101-2020_09_09_289074 210 10 orange orange NN 10_1101-2020_09_09_289074 210 11 , , , 10_1101-2020_09_09_289074 210 12 based base VBN 10_1101-2020_09_09_289074 210 13 on on IN 10_1101-2020_09_09_289074 210 14 the the DT 10_1101-2020_09_09_289074 210 15 6LZG 6LZG NNP 10_1101-2020_09_09_289074 210 16 PDB PDB NNP 10_1101-2020_09_09_289074 210 17 model model NN 10_1101-2020_09_09_289074 210 18 ( ( -LRB- 10_1101-2020_09_09_289074 210 19 10 10 CD 10_1101-2020_09_09_289074 210 20 ) ) -RRB- 10_1101-2020_09_09_289074 210 21 . . . 10_1101-2020_09_09_289074 211 1 Residues residue NNS 10_1101-2020_09_09_289074 211 2 highlighted highlight VBN 10_1101-2020_09_09_289074 211 3 by by IN 10_1101-2020_09_09_289074 211 4 GBPM GBPM NNP 10_1101-2020_09_09_289074 211 5 are be VBP 10_1101-2020_09_09_289074 211 6 then then RB 10_1101-2020_09_09_289074 211 7 tested test VBN 10_1101-2020_09_09_289074 211 8 for for IN 10_1101-2020_09_09_289074 211 9 mutation mutation NN 10_1101-2020_09_09_289074 211 10 frequency frequency NN 10_1101-2020_09_09_289074 211 11 in in IN 10_1101-2020_09_09_289074 211 12 the the DT 10_1101-2020_09_09_289074 211 13 worldwide worldwide JJ 10_1101-2020_09_09_289074 211 14 SARS SARS NNP 10_1101-2020_09_09_289074 211 15 - - HYPH 10_1101-2020_09_09_289074 211 16 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 211 17 population population NN 10_1101-2020_09_09_289074 211 18 . . . 10_1101-2020_09_09_289074 212 1 .CC .CC NFP 10_1101-2020_09_09_289074 212 2 - - : 10_1101-2020_09_09_289074 212 3 BY by IN 10_1101-2020_09_09_289074 212 4 - - HYPH 10_1101-2020_09_09_289074 212 5 NC NC NNP 10_1101-2020_09_09_289074 212 6 - - HYPH 10_1101-2020_09_09_289074 212 7 ND ND NNP 10_1101-2020_09_09_289074 212 8 4.0 4.0 CD 10_1101-2020_09_09_289074 212 9 International International NNP 10_1101-2020_09_09_289074 212 10 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 212 11 under under IN 10_1101-2020_09_09_289074 212 12 a a DT 10_1101-2020_09_09_289074 212 13 ( ( -LRB- 10_1101-2020_09_09_289074 212 14 which which WDT 10_1101-2020_09_09_289074 212 15 was be VBD 10_1101-2020_09_09_289074 212 16 not not RB 10_1101-2020_09_09_289074 212 17 certified certify VBN 10_1101-2020_09_09_289074 212 18 by by IN 10_1101-2020_09_09_289074 212 19 peer peer NN 10_1101-2020_09_09_289074 212 20 review review NN 10_1101-2020_09_09_289074 212 21 ) ) -RRB- 10_1101-2020_09_09_289074 212 22 is be VBZ 10_1101-2020_09_09_289074 212 23 the the DT 10_1101-2020_09_09_289074 212 24 author author NN 10_1101-2020_09_09_289074 212 25 / / SYM 10_1101-2020_09_09_289074 212 26 funder funder NN 10_1101-2020_09_09_289074 212 27 , , , 10_1101-2020_09_09_289074 212 28 who who WP 10_1101-2020_09_09_289074 212 29 has have VBZ 10_1101-2020_09_09_289074 212 30 granted grant VBN 10_1101-2020_09_09_289074 212 31 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 212 32 a a DT 10_1101-2020_09_09_289074 212 33 license license NN 10_1101-2020_09_09_289074 212 34 to to TO 10_1101-2020_09_09_289074 212 35 display display VB 10_1101-2020_09_09_289074 212 36 the the DT 10_1101-2020_09_09_289074 212 37 preprint preprint NN 10_1101-2020_09_09_289074 212 38 in in IN 10_1101-2020_09_09_289074 212 39 perpetuity perpetuity NN 10_1101-2020_09_09_289074 212 40 . . . 10_1101-2020_09_09_289074 213 1 It -PRON- PRP 10_1101-2020_09_09_289074 213 2 is be VBZ 10_1101-2020_09_09_289074 213 3 made make VBN 10_1101-2020_09_09_289074 213 4 The the DT 10_1101-2020_09_09_289074 213 5 copyright copyright NN 10_1101-2020_09_09_289074 213 6 holder holder NN 10_1101-2020_09_09_289074 213 7 for for IN 10_1101-2020_09_09_289074 213 8 this this DT 10_1101-2020_09_09_289074 213 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 213 10 version version NN 10_1101-2020_09_09_289074 213 11 posted post VBD 10_1101-2020_09_09_289074 213 12 January January NNP 10_1101-2020_09_09_289074 213 13 5 5 CD 10_1101-2020_09_09_289074 213 14 , , , 10_1101-2020_09_09_289074 213 15 2021 2021 CD 10_1101-2020_09_09_289074 213 16 . . . 10_1101-2020_09_09_289074 213 17 ; ; : 10_1101-2020_09_09_289074 213 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 213 19 : : : 10_1101-2020_09_09_289074 213 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 213 21 preprint preprint NN 10_1101-2020_09_09_289074 213 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 213 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ CD 10_1101-2020_09_09_289074 213 24 15 15 CD 10_1101-2020_09_09_289074 213 25 Figure figure NN 10_1101-2020_09_09_289074 213 26 3 3 CD 10_1101-2020_09_09_289074 213 27 . . . 10_1101-2020_09_09_289074 214 1 3D 3D NNP 10_1101-2020_09_09_289074 214 2 ribbon ribbon NNP 10_1101-2020_09_09_289074 214 3 representation representation NN 10_1101-2020_09_09_289074 214 4 of of IN 10_1101-2020_09_09_289074 214 5 the the DT 10_1101-2020_09_09_289074 214 6 interaction interaction NN 10_1101-2020_09_09_289074 214 7 domains domain NNS 10_1101-2020_09_09_289074 214 8 of of IN 10_1101-2020_09_09_289074 214 9 SARS SARS NNP 10_1101-2020_09_09_289074 214 10 - - HYPH 10_1101-2020_09_09_289074 214 11 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 214 12 Spike Spike NNP 10_1101-2020_09_09_289074 214 13 ( ( -LRB- 10_1101-2020_09_09_289074 214 14 left left JJ 10_1101-2020_09_09_289074 214 15 , , , 10_1101-2020_09_09_289074 214 16 orange orange NNP 10_1101-2020_09_09_289074 214 17 ) ) -RRB- 10_1101-2020_09_09_289074 214 18 and and CC 10_1101-2020_09_09_289074 214 19 human human JJ 10_1101-2020_09_09_289074 214 20 ACE2 ACE2 NNS 10_1101-2020_09_09_289074 214 21 ( ( -LRB- 10_1101-2020_09_09_289074 214 22 right right UH 10_1101-2020_09_09_289074 214 23 , , , 10_1101-2020_09_09_289074 214 24 green green JJ 10_1101-2020_09_09_289074 214 25 ) ) -RRB- 10_1101-2020_09_09_289074 214 26 , , , 10_1101-2020_09_09_289074 214 27 based base VBN 10_1101-2020_09_09_289074 214 28 on on IN 10_1101-2020_09_09_289074 214 29 the the DT 10_1101-2020_09_09_289074 214 30 crystal crystal NN 10_1101-2020_09_09_289074 214 31 structure structure NN 10_1101-2020_09_09_289074 214 32 6LZG 6LZG NNP 10_1101-2020_09_09_289074 214 33 deposited deposit VBD 10_1101-2020_09_09_289074 214 34 on on IN 10_1101-2020_09_09_289074 214 35 Protein Protein NNP 10_1101-2020_09_09_289074 214 36 Data Data NNPS 10_1101-2020_09_09_289074 214 37 Bank Bank NNP 10_1101-2020_09_09_289074 214 38 and and CC 10_1101-2020_09_09_289074 214 39 produced produce VBN 10_1101-2020_09_09_289074 214 40 by by IN 10_1101-2020_09_09_289074 214 41 ( ( -LRB- 10_1101-2020_09_09_289074 214 42 10 10 CD 10_1101-2020_09_09_289074 214 43 ) ) -RRB- 10_1101-2020_09_09_289074 214 44 . . . 10_1101-2020_09_09_289074 215 1 The the DT 10_1101-2020_09_09_289074 215 2 positions position NNS 10_1101-2020_09_09_289074 215 3 of of IN 10_1101-2020_09_09_289074 215 4 the the DT 10_1101-2020_09_09_289074 215 5 three three CD 10_1101-2020_09_09_289074 215 6 most most RBS 10_1101-2020_09_09_289074 215 7 frequent frequent JJ 10_1101-2020_09_09_289074 215 8 Spike Spike NNP 10_1101-2020_09_09_289074 215 9 mutations mutation NNS 10_1101-2020_09_09_289074 215 10 in in IN 10_1101-2020_09_09_289074 215 11 the the DT 10_1101-2020_09_09_289074 215 12 interacting interacting NN 10_1101-2020_09_09_289074 215 13 region region NN 10_1101-2020_09_09_289074 215 14 ( ( -LRB- 10_1101-2020_09_09_289074 215 15 AA AA NNP 10_1101-2020_09_09_289074 215 16 350 350 CD 10_1101-2020_09_09_289074 215 17 - - HYPH 10_1101-2020_09_09_289074 215 18 550 550 CD 10_1101-2020_09_09_289074 215 19 ) ) -RRB- 10_1101-2020_09_09_289074 215 20 with with IN 10_1101-2020_09_09_289074 215 21 a a DT 10_1101-2020_09_09_289074 215 22 non non JJ 10_1101-2020_09_09_289074 215 23 - - JJ 10_1101-2020_09_09_289074 215 24 zero zero CD 10_1101-2020_09_09_289074 215 25 GBPM GBPM NNP 10_1101-2020_09_09_289074 215 26 score score NN 10_1101-2020_09_09_289074 215 27 are be VBP 10_1101-2020_09_09_289074 215 28 indicated indicate VBN 10_1101-2020_09_09_289074 215 29 : : : 10_1101-2020_09_09_289074 215 30 N439 N439 NNP 10_1101-2020_09_09_289074 215 31 K K NNP 10_1101-2020_09_09_289074 215 32 , , , 10_1101-2020_09_09_289074 215 33 N501Y N501Y NNP 10_1101-2020_09_09_289074 215 34 and and CC 10_1101-2020_09_09_289074 215 35 S477N. s477n. ADD 10_1101-2020_09_09_289074 216 1 .CC .CC NFP 10_1101-2020_09_09_289074 216 2 - - : 10_1101-2020_09_09_289074 216 3 BY by IN 10_1101-2020_09_09_289074 216 4 - - HYPH 10_1101-2020_09_09_289074 216 5 NC NC NNP 10_1101-2020_09_09_289074 216 6 - - HYPH 10_1101-2020_09_09_289074 216 7 ND ND NNP 10_1101-2020_09_09_289074 216 8 4.0 4.0 CD 10_1101-2020_09_09_289074 216 9 International International NNP 10_1101-2020_09_09_289074 216 10 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 216 11 under under IN 10_1101-2020_09_09_289074 216 12 a a DT 10_1101-2020_09_09_289074 216 13 ( ( -LRB- 10_1101-2020_09_09_289074 216 14 which which WDT 10_1101-2020_09_09_289074 216 15 was be VBD 10_1101-2020_09_09_289074 216 16 not not RB 10_1101-2020_09_09_289074 216 17 certified certify VBN 10_1101-2020_09_09_289074 216 18 by by IN 10_1101-2020_09_09_289074 216 19 peer peer NN 10_1101-2020_09_09_289074 216 20 review review NN 10_1101-2020_09_09_289074 216 21 ) ) -RRB- 10_1101-2020_09_09_289074 216 22 is be VBZ 10_1101-2020_09_09_289074 216 23 the the DT 10_1101-2020_09_09_289074 216 24 author author NN 10_1101-2020_09_09_289074 216 25 / / SYM 10_1101-2020_09_09_289074 216 26 funder funder NN 10_1101-2020_09_09_289074 216 27 , , , 10_1101-2020_09_09_289074 216 28 who who WP 10_1101-2020_09_09_289074 216 29 has have VBZ 10_1101-2020_09_09_289074 216 30 granted grant VBN 10_1101-2020_09_09_289074 216 31 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 216 32 a a DT 10_1101-2020_09_09_289074 216 33 license license NN 10_1101-2020_09_09_289074 216 34 to to TO 10_1101-2020_09_09_289074 216 35 display display VB 10_1101-2020_09_09_289074 216 36 the the DT 10_1101-2020_09_09_289074 216 37 preprint preprint NN 10_1101-2020_09_09_289074 216 38 in in IN 10_1101-2020_09_09_289074 216 39 perpetuity perpetuity NN 10_1101-2020_09_09_289074 216 40 . . . 10_1101-2020_09_09_289074 217 1 It -PRON- PRP 10_1101-2020_09_09_289074 217 2 is be VBZ 10_1101-2020_09_09_289074 217 3 made make VBN 10_1101-2020_09_09_289074 217 4 The the DT 10_1101-2020_09_09_289074 217 5 copyright copyright NN 10_1101-2020_09_09_289074 217 6 holder holder NN 10_1101-2020_09_09_289074 217 7 for for IN 10_1101-2020_09_09_289074 217 8 this this DT 10_1101-2020_09_09_289074 217 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 217 10 version version NN 10_1101-2020_09_09_289074 217 11 posted post VBD 10_1101-2020_09_09_289074 217 12 January January NNP 10_1101-2020_09_09_289074 217 13 5 5 CD 10_1101-2020_09_09_289074 217 14 , , , 10_1101-2020_09_09_289074 217 15 2021 2021 CD 10_1101-2020_09_09_289074 217 16 . . . 10_1101-2020_09_09_289074 217 17 ; ; : 10_1101-2020_09_09_289074 217 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 217 19 : : : 10_1101-2020_09_09_289074 217 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 217 21 preprint preprint NN 10_1101-2020_09_09_289074 217 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 217 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NN 10_1101-2020_09_09_289074 217 24 16 16 CD 10_1101-2020_09_09_289074 217 25 Figure Figure NNP 10_1101-2020_09_09_289074 217 26 4 4 CD 10_1101-2020_09_09_289074 217 27 . . . 10_1101-2020_09_09_289074 218 1 ( ( -LRB- 10_1101-2020_09_09_289074 218 2 A a DT 10_1101-2020_09_09_289074 218 3 ) ) -RRB- 10_1101-2020_09_09_289074 218 4 Occurrence Occurrence NNP 10_1101-2020_09_09_289074 218 5 of of IN 10_1101-2020_09_09_289074 218 6 AA AA NNP 10_1101-2020_09_09_289074 218 7 - - HYPH 10_1101-2020_09_09_289074 218 8 changing change VBG 10_1101-2020_09_09_289074 218 9 variants variant NNS 10_1101-2020_09_09_289074 218 10 on on IN 10_1101-2020_09_09_289074 218 11 SARS SARS NNP 10_1101-2020_09_09_289074 218 12 - - HYPH 10_1101-2020_09_09_289074 218 13 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 218 14 Spike Spike NNP 10_1101-2020_09_09_289074 218 15 protein protein NN 10_1101-2020_09_09_289074 218 16 . . . 10_1101-2020_09_09_289074 219 1 X X NNS 10_1101-2020_09_09_289074 219 2 - - NN 10_1101-2020_09_09_289074 219 3 axis axis RB 10_1101-2020_09_09_289074 219 4 indicates indicate VBZ 10_1101-2020_09_09_289074 219 5 the the DT 10_1101-2020_09_09_289074 219 6 position position NN 10_1101-2020_09_09_289074 219 7 of of IN 10_1101-2020_09_09_289074 219 8 the the DT 10_1101-2020_09_09_289074 219 9 affected affected JJ 10_1101-2020_09_09_289074 219 10 AA AA NNP 10_1101-2020_09_09_289074 219 11 . . . 10_1101-2020_09_09_289074 220 1 Y Y NNP 10_1101-2020_09_09_289074 220 2 - - HYPH 10_1101-2020_09_09_289074 220 3 axis axis NNP 10_1101-2020_09_09_289074 220 4 indicates indicate VBZ 10_1101-2020_09_09_289074 220 5 the the DT 10_1101-2020_09_09_289074 220 6 log10 log10 NNS 10_1101-2020_09_09_289074 220 7 of of IN 10_1101-2020_09_09_289074 220 8 the the DT 10_1101-2020_09_09_289074 220 9 number number NN 10_1101-2020_09_09_289074 220 10 of of IN 10_1101-2020_09_09_289074 220 11 occurrences occurrence NNS 10_1101-2020_09_09_289074 220 12 of of IN 10_1101-2020_09_09_289074 220 13 the the DT 10_1101-2020_09_09_289074 220 14 variant variant NN 10_1101-2020_09_09_289074 220 15 in in IN 10_1101-2020_09_09_289074 220 16 the the DT 10_1101-2020_09_09_289074 220 17 SARS SARS NNP 10_1101-2020_09_09_289074 220 18 - - HYPH 10_1101-2020_09_09_289074 220 19 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 220 20 dataset dataset NN 10_1101-2020_09_09_289074 220 21 . . . 10_1101-2020_09_09_289074 221 1 Labels label NNS 10_1101-2020_09_09_289074 221 2 indicate indicate VBP 10_1101-2020_09_09_289074 221 3 variants variant NNS 10_1101-2020_09_09_289074 221 4 affecting affect VBG 10_1101-2020_09_09_289074 221 5 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 221 6 / / SYM 10_1101-2020_09_09_289074 221 7 Spike Spike NNP 10_1101-2020_09_09_289074 221 8 binding bind VBG 10_1101-2020_09_09_289074 221 9 and and CC 10_1101-2020_09_09_289074 221 10 detected detect VBD 10_1101-2020_09_09_289074 221 11 in in IN 10_1101-2020_09_09_289074 221 12 at at RB 10_1101-2020_09_09_289074 221 13 least least RBS 10_1101-2020_09_09_289074 221 14 5 5 CD 10_1101-2020_09_09_289074 221 15 SARS SARS NNP 10_1101-2020_09_09_289074 221 16 - - HYPH 10_1101-2020_09_09_289074 221 17 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 221 18 sequences sequence NNS 10_1101-2020_09_09_289074 221 19 . . . 10_1101-2020_09_09_289074 222 1 Vertical vertical JJ 10_1101-2020_09_09_289074 222 2 dashed dash VBN 10_1101-2020_09_09_289074 222 3 lines line NNS 10_1101-2020_09_09_289074 222 4 indicate indicate VBP 10_1101-2020_09_09_289074 222 5 crystalized crystalized JJ 10_1101-2020_09_09_289074 222 6 region region NN 10_1101-2020_09_09_289074 222 7 analyzed analyze VBN 10_1101-2020_09_09_289074 222 8 ( ( -LRB- 10_1101-2020_09_09_289074 222 9 aa aa NNP 10_1101-2020_09_09_289074 222 10 330 330 CD 10_1101-2020_09_09_289074 222 11 – – : 10_1101-2020_09_09_289074 222 12 530 530 CD 10_1101-2020_09_09_289074 222 13 ) ) -RRB- 10_1101-2020_09_09_289074 222 14 . . . 10_1101-2020_09_09_289074 223 1 The the DT 10_1101-2020_09_09_289074 223 2 D614 D614 NNP 10_1101-2020_09_09_289074 223 3 G G NNP 10_1101-2020_09_09_289074 223 4 variant variant NN 10_1101-2020_09_09_289074 223 5 , , , 10_1101-2020_09_09_289074 223 6 located locate VBN 10_1101-2020_09_09_289074 223 7 outside outside IN 10_1101-2020_09_09_289074 223 8 the the DT 10_1101-2020_09_09_289074 223 9 RBD RBD NNP 10_1101-2020_09_09_289074 223 10 , , , 10_1101-2020_09_09_289074 223 11 is be VBZ 10_1101-2020_09_09_289074 223 12 also also RB 10_1101-2020_09_09_289074 223 13 indicated indicate VBN 10_1101-2020_09_09_289074 223 14 . . . 10_1101-2020_09_09_289074 224 1 ( ( -LRB- 10_1101-2020_09_09_289074 224 2 B b NN 10_1101-2020_09_09_289074 224 3 ) ) -RRB- 10_1101-2020_09_09_289074 224 4 Scatter scatter NN 10_1101-2020_09_09_289074 224 5 plot plot NN 10_1101-2020_09_09_289074 224 6 indicating indicate VBG 10_1101-2020_09_09_289074 224 7 the the DT 10_1101-2020_09_09_289074 224 8 occurrence occurrence NN 10_1101-2020_09_09_289074 224 9 of of IN 10_1101-2020_09_09_289074 224 10 the the DT 10_1101-2020_09_09_289074 224 11 variant variant NN 10_1101-2020_09_09_289074 224 12 in in IN 10_1101-2020_09_09_289074 224 13 the the DT 10_1101-2020_09_09_289074 224 14 population population NN 10_1101-2020_09_09_289074 224 15 ( ( -LRB- 10_1101-2020_09_09_289074 224 16 x x SYM 10_1101-2020_09_09_289074 224 17 - - : 10_1101-2020_09_09_289074 224 18 axis axis NNP 10_1101-2020_09_09_289074 224 19 ) ) -RRB- 10_1101-2020_09_09_289074 224 20 and and CC 10_1101-2020_09_09_289074 224 21 the the DT 10_1101-2020_09_09_289074 224 22 GBPM GBPM NNP 10_1101-2020_09_09_289074 224 23 score score NN 10_1101-2020_09_09_289074 224 24 of of IN 10_1101-2020_09_09_289074 224 25 the the DT 10_1101-2020_09_09_289074 224 26 reference reference NN 10_1101-2020_09_09_289074 224 27 AA AA NNP 10_1101-2020_09_09_289074 224 28 in in IN 10_1101-2020_09_09_289074 224 29 the the DT 10_1101-2020_09_09_289074 224 30 model model NN 10_1101-2020_09_09_289074 224 31 ( ( -LRB- 10_1101-2020_09_09_289074 224 32 y y NNP 10_1101-2020_09_09_289074 224 33 - - HYPH 10_1101-2020_09_09_289074 224 34 axis axis NNP 10_1101-2020_09_09_289074 224 35 ) ) -RRB- 10_1101-2020_09_09_289074 224 36 . . . 10_1101-2020_09_09_289074 225 1 Mutations mutation NNS 10_1101-2020_09_09_289074 225 2 with with IN 10_1101-2020_09_09_289074 225 3 non non JJ 10_1101-2020_09_09_289074 225 4 - - JJ 10_1101-2020_09_09_289074 225 5 zero zero CD 10_1101-2020_09_09_289074 225 6 GBPM GBPM NNP 10_1101-2020_09_09_289074 225 7 score score NN 10_1101-2020_09_09_289074 225 8 are be VBP 10_1101-2020_09_09_289074 225 9 indicated indicate VBN 10_1101-2020_09_09_289074 225 10 . . . 10_1101-2020_09_09_289074 226 1 CC CC NNP 10_1101-2020_09_09_289074 226 2 indicates indicate VBZ 10_1101-2020_09_09_289074 226 3 the the DT 10_1101-2020_09_09_289074 226 4 Pearson Pearson NNP 10_1101-2020_09_09_289074 226 5 correlation correlation NN 10_1101-2020_09_09_289074 226 6 coefficient coefficient NN 10_1101-2020_09_09_289074 226 7 and and CC 10_1101-2020_09_09_289074 226 8 p p NN 10_1101-2020_09_09_289074 226 9 indicates indicate VBZ 10_1101-2020_09_09_289074 226 10 the the DT 10_1101-2020_09_09_289074 226 11 p p NN 10_1101-2020_09_09_289074 226 12 - - HYPH 10_1101-2020_09_09_289074 226 13 value value NN 10_1101-2020_09_09_289074 226 14 of of IN 10_1101-2020_09_09_289074 226 15 the the DT 10_1101-2020_09_09_289074 226 16 CC cc NN 10_1101-2020_09_09_289074 226 17 . . . 10_1101-2020_09_09_289074 227 1 .CC .CC NFP 10_1101-2020_09_09_289074 227 2 - - : 10_1101-2020_09_09_289074 227 3 BY by IN 10_1101-2020_09_09_289074 227 4 - - HYPH 10_1101-2020_09_09_289074 227 5 NC NC NNP 10_1101-2020_09_09_289074 227 6 - - HYPH 10_1101-2020_09_09_289074 227 7 ND ND NNP 10_1101-2020_09_09_289074 227 8 4.0 4.0 CD 10_1101-2020_09_09_289074 227 9 International International NNP 10_1101-2020_09_09_289074 227 10 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 227 11 under under IN 10_1101-2020_09_09_289074 227 12 a a DT 10_1101-2020_09_09_289074 227 13 ( ( -LRB- 10_1101-2020_09_09_289074 227 14 which which WDT 10_1101-2020_09_09_289074 227 15 was be VBD 10_1101-2020_09_09_289074 227 16 not not RB 10_1101-2020_09_09_289074 227 17 certified certify VBN 10_1101-2020_09_09_289074 227 18 by by IN 10_1101-2020_09_09_289074 227 19 peer peer NN 10_1101-2020_09_09_289074 227 20 review review NN 10_1101-2020_09_09_289074 227 21 ) ) -RRB- 10_1101-2020_09_09_289074 227 22 is be VBZ 10_1101-2020_09_09_289074 227 23 the the DT 10_1101-2020_09_09_289074 227 24 author author NN 10_1101-2020_09_09_289074 227 25 / / SYM 10_1101-2020_09_09_289074 227 26 funder funder NN 10_1101-2020_09_09_289074 227 27 , , , 10_1101-2020_09_09_289074 227 28 who who WP 10_1101-2020_09_09_289074 227 29 has have VBZ 10_1101-2020_09_09_289074 227 30 granted grant VBN 10_1101-2020_09_09_289074 227 31 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 227 32 a a DT 10_1101-2020_09_09_289074 227 33 license license NN 10_1101-2020_09_09_289074 227 34 to to TO 10_1101-2020_09_09_289074 227 35 display display VB 10_1101-2020_09_09_289074 227 36 the the DT 10_1101-2020_09_09_289074 227 37 preprint preprint NN 10_1101-2020_09_09_289074 227 38 in in IN 10_1101-2020_09_09_289074 227 39 perpetuity perpetuity NN 10_1101-2020_09_09_289074 227 40 . . . 10_1101-2020_09_09_289074 228 1 It -PRON- PRP 10_1101-2020_09_09_289074 228 2 is be VBZ 10_1101-2020_09_09_289074 228 3 made make VBN 10_1101-2020_09_09_289074 228 4 The the DT 10_1101-2020_09_09_289074 228 5 copyright copyright NN 10_1101-2020_09_09_289074 228 6 holder holder NN 10_1101-2020_09_09_289074 228 7 for for IN 10_1101-2020_09_09_289074 228 8 this this DT 10_1101-2020_09_09_289074 228 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 228 10 version version NN 10_1101-2020_09_09_289074 228 11 posted post VBD 10_1101-2020_09_09_289074 228 12 January January NNP 10_1101-2020_09_09_289074 228 13 5 5 CD 10_1101-2020_09_09_289074 228 14 , , , 10_1101-2020_09_09_289074 228 15 2021 2021 CD 10_1101-2020_09_09_289074 228 16 . . . 10_1101-2020_09_09_289074 228 17 ; ; : 10_1101-2020_09_09_289074 228 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 228 19 : : : 10_1101-2020_09_09_289074 228 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 228 21 preprint preprint NN 10_1101-2020_09_09_289074 228 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 228 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NNP 10_1101-2020_09_09_289074 228 24 Figure Figure NNP 10_1101-2020_09_09_289074 228 25 5 5 CD 10_1101-2020_09_09_289074 228 26 . . . 10_1101-2020_09_09_289074 229 1 Frequency frequency NN 10_1101-2020_09_09_289074 229 2 of of IN 10_1101-2020_09_09_289074 229 3 mutations mutation NNS 10_1101-2020_09_09_289074 229 4 on on IN 10_1101-2020_09_09_289074 229 5 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 229 6 . . . 10_1101-2020_09_09_289074 230 1 X X NNS 10_1101-2020_09_09_289074 230 2 - - NN 10_1101-2020_09_09_289074 230 3 axis axis RB 10_1101-2020_09_09_289074 230 4 indicates indicate VBZ 10_1101-2020_09_09_289074 230 5 the the DT 10_1101-2020_09_09_289074 230 6 AA AA NNP 10_1101-2020_09_09_289074 230 7 position position NN 10_1101-2020_09_09_289074 230 8 in in IN 10_1101-2020_09_09_289074 230 9 isoform isoform NN 10_1101-2020_09_09_289074 230 10 1 1 CD 10_1101-2020_09_09_289074 230 11 ( ( -LRB- 10_1101-2020_09_09_289074 230 12 UniProt UniProt NNP 10_1101-2020_09_09_289074 230 13 Q9BYF1 Q9BYF1 NNP 10_1101-2020_09_09_289074 230 14 - - HYPH 10_1101-2020_09_09_289074 230 15 1 1 CD 10_1101-2020_09_09_289074 230 16 ) ) -RRB- 10_1101-2020_09_09_289074 230 17 . . . 10_1101-2020_09_09_289074 231 1 Y Y NNP 10_1101-2020_09_09_289074 231 2 - - HYPH 10_1101-2020_09_09_289074 231 3 axis axis NNP 10_1101-2020_09_09_289074 231 4 indicates indicate VBZ 10_1101-2020_09_09_289074 231 5 the the DT 10_1101-2020_09_09_289074 231 6 allele allele NNP 10_1101-2020_09_09_289074 231 7 frequency frequency NN 10_1101-2020_09_09_289074 231 8 in in IN 10_1101-2020_09_09_289074 231 9 the the DT 10_1101-2020_09_09_289074 231 10 global global JJ 10_1101-2020_09_09_289074 231 11 population population NN 10_1101-2020_09_09_289074 231 12 according accord VBG 10_1101-2020_09_09_289074 231 13 to to IN 10_1101-2020_09_09_289074 231 14 the the DT 10_1101-2020_09_09_289074 231 15 GNOMA GNOMA NNP 10_1101-2020_09_09_289074 231 16 v3 v3 NN 10_1101-2020_09_09_289074 231 17 database database NN 10_1101-2020_09_09_289074 231 18 . . . 10_1101-2020_09_09_289074 232 1 Labels label NNS 10_1101-2020_09_09_289074 232 2 indicate indicate VBP 10_1101-2020_09_09_289074 232 3 AA AA NNP 10_1101-2020_09_09_289074 232 4 changes change NNS 10_1101-2020_09_09_289074 232 5 observed observe VBN 10_1101-2020_09_09_289074 232 6 in in IN 10_1101-2020_09_09_289074 232 7 the the DT 10_1101-2020_09_09_289074 232 8 human human JJ 10_1101-2020_09_09_289074 232 9 population population NN 10_1101-2020_09_09_289074 232 10 with with IN 10_1101-2020_09_09_289074 232 11 non non JJ 10_1101-2020_09_09_289074 232 12 - - JJ 10_1101-2020_09_09_289074 232 13 zero zero CD 10_1101-2020_09_09_289074 232 14 GBP GBP NNP 10_1101-2020_09_09_289074 232 15 average average JJ 10_1101-2020_09_09_289074 232 16 score score NN 10_1101-2020_09_09_289074 232 17 in in IN 10_1101-2020_09_09_289074 232 18 the the DT 10_1101-2020_09_09_289074 232 19 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 232 20 / / SYM 10_1101-2020_09_09_289074 232 21 Spike Spike NNP 10_1101-2020_09_09_289074 232 22 interaction interaction NN 10_1101-2020_09_09_289074 232 23 models model NNS 10_1101-2020_09_09_289074 232 24 . . . 10_1101-2020_09_09_289074 233 1 Vertical vertical JJ 10_1101-2020_09_09_289074 233 2 dashed dash VBN 10_1101-2020_09_09_289074 233 3 lines line NNS 10_1101-2020_09_09_289074 233 4 indicate indicate VBP 10_1101-2020_09_09_289074 233 5 the the DT 10_1101-2020_09_09_289074 233 6 crystaliz crystaliz JJ 10_1101-2020_09_09_289074 233 7 region region NN 10_1101-2020_09_09_289074 233 8 analyzed analyze VBN 10_1101-2020_09_09_289074 233 9 in in IN 10_1101-2020_09_09_289074 233 10 this this DT 10_1101-2020_09_09_289074 233 11 study study NN 10_1101-2020_09_09_289074 233 12 ( ( -LRB- 10_1101-2020_09_09_289074 233 13 aa aa NNP 10_1101-2020_09_09_289074 233 14 15 15 CD 10_1101-2020_09_09_289074 233 15 – – : 10_1101-2020_09_09_289074 233 16 615 615 CD 10_1101-2020_09_09_289074 233 17 ) ) -RRB- 10_1101-2020_09_09_289074 233 18 . . . 10_1101-2020_09_09_289074 234 1 17 17 CD 10_1101-2020_09_09_289074 234 2 i -PRON- PRP 10_1101-2020_09_09_289074 234 3 d d VBN 10_1101-2020_09_09_289074 234 4 AD ad NN 10_1101-2020_09_09_289074 234 5 PM pm NN 10_1101-2020_09_09_289074 234 6 ed ed NN 10_1101-2020_09_09_289074 234 7 .CC .CC NFP 10_1101-2020_09_09_289074 234 8 - - : 10_1101-2020_09_09_289074 234 9 BY by IN 10_1101-2020_09_09_289074 234 10 - - HYPH 10_1101-2020_09_09_289074 234 11 NC NC NNP 10_1101-2020_09_09_289074 234 12 - - HYPH 10_1101-2020_09_09_289074 234 13 ND ND NNP 10_1101-2020_09_09_289074 234 14 4.0 4.0 CD 10_1101-2020_09_09_289074 234 15 International International NNP 10_1101-2020_09_09_289074 234 16 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 234 17 under under IN 10_1101-2020_09_09_289074 234 18 a a DT 10_1101-2020_09_09_289074 234 19 ( ( -LRB- 10_1101-2020_09_09_289074 234 20 which which WDT 10_1101-2020_09_09_289074 234 21 was be VBD 10_1101-2020_09_09_289074 234 22 not not RB 10_1101-2020_09_09_289074 234 23 certified certify VBN 10_1101-2020_09_09_289074 234 24 by by IN 10_1101-2020_09_09_289074 234 25 peer peer NN 10_1101-2020_09_09_289074 234 26 review review NN 10_1101-2020_09_09_289074 234 27 ) ) -RRB- 10_1101-2020_09_09_289074 234 28 is be VBZ 10_1101-2020_09_09_289074 234 29 the the DT 10_1101-2020_09_09_289074 234 30 author author NN 10_1101-2020_09_09_289074 234 31 / / SYM 10_1101-2020_09_09_289074 234 32 funder funder NN 10_1101-2020_09_09_289074 234 33 , , , 10_1101-2020_09_09_289074 234 34 who who WP 10_1101-2020_09_09_289074 234 35 has have VBZ 10_1101-2020_09_09_289074 234 36 granted grant VBN 10_1101-2020_09_09_289074 234 37 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 234 38 a a DT 10_1101-2020_09_09_289074 234 39 license license NN 10_1101-2020_09_09_289074 234 40 to to TO 10_1101-2020_09_09_289074 234 41 display display VB 10_1101-2020_09_09_289074 234 42 the the DT 10_1101-2020_09_09_289074 234 43 preprint preprint NN 10_1101-2020_09_09_289074 234 44 in in IN 10_1101-2020_09_09_289074 234 45 perpetuity perpetuity NN 10_1101-2020_09_09_289074 234 46 . . . 10_1101-2020_09_09_289074 235 1 It -PRON- PRP 10_1101-2020_09_09_289074 235 2 is be VBZ 10_1101-2020_09_09_289074 235 3 made make VBN 10_1101-2020_09_09_289074 235 4 The the DT 10_1101-2020_09_09_289074 235 5 copyright copyright NN 10_1101-2020_09_09_289074 235 6 holder holder NN 10_1101-2020_09_09_289074 235 7 for for IN 10_1101-2020_09_09_289074 235 8 this this DT 10_1101-2020_09_09_289074 235 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 235 10 version version NN 10_1101-2020_09_09_289074 235 11 posted post VBD 10_1101-2020_09_09_289074 235 12 January January NNP 10_1101-2020_09_09_289074 235 13 5 5 CD 10_1101-2020_09_09_289074 235 14 , , , 10_1101-2020_09_09_289074 235 15 2021 2021 CD 10_1101-2020_09_09_289074 235 16 . . . 10_1101-2020_09_09_289074 235 17 ; ; : 10_1101-2020_09_09_289074 235 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 235 19 : : : 10_1101-2020_09_09_289074 235 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 235 21 preprint preprint NN 10_1101-2020_09_09_289074 235 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 235 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ CD 10_1101-2020_09_09_289074 235 24 18 18 CD 10_1101-2020_09_09_289074 235 25 Table table NN 10_1101-2020_09_09_289074 235 26 1 1 CD 10_1101-2020_09_09_289074 235 27 . . . 10_1101-2020_09_09_289074 236 1 GBPM gbpm NN 10_1101-2020_09_09_289074 236 2 scores score NNS 10_1101-2020_09_09_289074 236 3 , , , 10_1101-2020_09_09_289074 236 4 average average JJ 10_1101-2020_09_09_289074 236 5 values value NNS 10_1101-2020_09_09_289074 236 6 , , , 10_1101-2020_09_09_289074 236 7 and and CC 10_1101-2020_09_09_289074 236 8 quartile quartile JJ 10_1101-2020_09_09_289074 236 9 distribution distribution NN 10_1101-2020_09_09_289074 236 10 of of IN 10_1101-2020_09_09_289074 236 11 Spike Spike NNP 10_1101-2020_09_09_289074 236 12 relevant relevant JJ 10_1101-2020_09_09_289074 236 13 AAs aa NNS 10_1101-2020_09_09_289074 236 14 in in IN 10_1101-2020_09_09_289074 236 15 three three CD 10_1101-2020_09_09_289074 236 16 PDB PDB NNP 10_1101-2020_09_09_289074 236 17 models model NNS 10_1101-2020_09_09_289074 236 18 . . . 10_1101-2020_09_09_289074 237 1 GBPM gbpm NN 10_1101-2020_09_09_289074 237 2 scores score NNS 10_1101-2020_09_09_289074 237 3 and and CC 10_1101-2020_09_09_289074 237 4 average average JJ 10_1101-2020_09_09_289074 237 5 values value NNS 10_1101-2020_09_09_289074 237 6 are be VBP 10_1101-2020_09_09_289074 237 7 reported report VBN 10_1101-2020_09_09_289074 237 8 in in IN 10_1101-2020_09_09_289074 237 9 kcal kcal NNP 10_1101-2020_09_09_289074 237 10 / / SYM 10_1101-2020_09_09_289074 237 11 mol mol NN 10_1101-2020_09_09_289074 237 12 . . . 10_1101-2020_09_09_289074 238 1 Residue Residue NNP 10_1101-2020_09_09_289074 238 2 # # NN 10_1101-2020_09_09_289074 238 3 PDB PDB NNP 10_1101-2020_09_09_289074 238 4 entries entrie VBZ 10_1101-2020_09_09_289074 238 5 GBPM GBPM NNP 10_1101-2020_09_09_289074 238 6 6LZG 6lzg NN 10_1101-2020_09_09_289074 238 7 6M0J 6m0j CD 10_1101-2020_09_09_289074 238 8 6VW1-A 6vw1-a CD 10_1101-2020_09_09_289074 238 9 6VW1-B 6vw1-b CD 10_1101-2020_09_09_289074 238 10 Average average JJ 10_1101-2020_09_09_289074 238 11 score score NN 10_1101-2020_09_09_289074 238 12 Quartile Quartile NNP 10_1101-2020_09_09_289074 238 13 LYS LYS NNP 10_1101-2020_09_09_289074 238 14 417 417 CD 10_1101-2020_09_09_289074 238 15 -43.58 -43.58 : 10_1101-2020_09_09_289074 238 16 -12.12 -12.12 CD 10_1101-2020_09_09_289074 238 17 0.00 0.00 CD 10_1101-2020_09_09_289074 238 18 0.00 0.00 CD 10_1101-2020_09_09_289074 238 19 -13.93 -13.93 NFP 10_1101-2020_09_09_289074 238 20 Q2 q2 NN 10_1101-2020_09_09_289074 238 21 ASN asn NN 10_1101-2020_09_09_289074 238 22 439 439 CD 10_1101-2020_09_09_289074 238 23 0.00 0.00 CD 10_1101-2020_09_09_289074 238 24 0.00 0.00 CD 10_1101-2020_09_09_289074 238 25 -12.30 -12.30 NN 10_1101-2020_09_09_289074 238 26 -34.94 -34.94 FW 10_1101-2020_09_09_289074 238 27 -11.81 -11.81 : 10_1101-2020_09_09_289074 238 28 Q2 q2 NN 10_1101-2020_09_09_289074 238 29 GLY GLY NNP 10_1101-2020_09_09_289074 238 30 446 446 CD 10_1101-2020_09_09_289074 238 31 -22.52 -22.52 : 10_1101-2020_09_09_289074 238 32 -5.75 -5.75 CD 10_1101-2020_09_09_289074 238 33 0.00 0.00 CD 10_1101-2020_09_09_289074 238 34 -10.32 -10.32 HYPH 10_1101-2020_09_09_289074 238 35 -9.65 -9.65 CD 10_1101-2020_09_09_289074 238 36 Q3 Q3 NNP 10_1101-2020_09_09_289074 238 37 GLY GLY NNP 10_1101-2020_09_09_289074 238 38 447 447 CD 10_1101-2020_09_09_289074 238 39 -5.63 -5.63 CD 10_1101-2020_09_09_289074 238 40 0.00 0.00 CD 10_1101-2020_09_09_289074 238 41 0.00 0.00 CD 10_1101-2020_09_09_289074 238 42 0.00 0.00 CD 10_1101-2020_09_09_289074 238 43 -1.41 -1.41 CD 10_1101-2020_09_09_289074 238 44 Q3 q3 NN 10_1101-2020_09_09_289074 238 45 TYR TYR NNP 10_1101-2020_09_09_289074 238 46 449 449 CD 10_1101-2020_09_09_289074 238 47 -25.72 -25.72 -RRB- 10_1101-2020_09_09_289074 238 48 -6.38 -6.38 HYPH 10_1101-2020_09_09_289074 238 49 -20.37 -20.37 FW 10_1101-2020_09_09_289074 238 50 -24.76 -24.76 : 10_1101-2020_09_09_289074 238 51 -19.31 -19.31 -RRB- 10_1101-2020_09_09_289074 238 52 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 53 TYR TYR NNP 10_1101-2020_09_09_289074 238 54 453 453 CD 10_1101-2020_09_09_289074 238 55 0.00 0.00 CD 10_1101-2020_09_09_289074 238 56 0.00 0.00 CD 10_1101-2020_09_09_289074 238 57 -1.77 -1.77 CD 10_1101-2020_09_09_289074 238 58 -1.76 -1.76 CD 10_1101-2020_09_09_289074 238 59 -0.88 -0.88 CD 10_1101-2020_09_09_289074 238 60 Q4 Q4 NNP 10_1101-2020_09_09_289074 238 61 LEU LEU NNP 10_1101-2020_09_09_289074 238 62 455 455 CD 10_1101-2020_09_09_289074 238 63 -11.59 -11.59 HYPH 10_1101-2020_09_09_289074 238 64 -16.82 -16.82 NFP 10_1101-2020_09_09_289074 238 65 -21.78 -21.78 NFP 10_1101-2020_09_09_289074 238 66 -7.04 -7.04 HYPH 10_1101-2020_09_09_289074 238 67 -14.31 -14.31 NN 10_1101-2020_09_09_289074 238 68 Q2 q2 NN 10_1101-2020_09_09_289074 238 69 PHE PHE NNP 10_1101-2020_09_09_289074 238 70 456 456 CD 10_1101-2020_09_09_289074 238 71 -34.20 -34.20 JJ 10_1101-2020_09_09_289074 238 72 -30.16 -30.16 : 10_1101-2020_09_09_289074 238 73 -39.72 -39.72 NFP 10_1101-2020_09_09_289074 238 74 -20.76 -20.76 : 10_1101-2020_09_09_289074 238 75 -31.21 -31.21 : 10_1101-2020_09_09_289074 238 76 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 77 ALA ALA NNP 10_1101-2020_09_09_289074 238 78 475 475 CD 10_1101-2020_09_09_289074 238 79 -52.35 -52.35 : 10_1101-2020_09_09_289074 238 80 -49.72 -49.72 HYPH 10_1101-2020_09_09_289074 238 81 -38.73 -38.73 NFP 10_1101-2020_09_09_289074 238 82 -77.00 -77.00 NFP 10_1101-2020_09_09_289074 238 83 -54.45 -54.45 : 10_1101-2020_09_09_289074 238 84 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 85 GLY GLY NNP 10_1101-2020_09_09_289074 238 86 476 476 CD 10_1101-2020_09_09_289074 238 87 -21.72 -21.72 CD 10_1101-2020_09_09_289074 238 88 0.00 0.00 CD 10_1101-2020_09_09_289074 238 89 -17.16 -17.16 HYPH 10_1101-2020_09_09_289074 238 90 -34.59 -34.59 FW 10_1101-2020_09_09_289074 238 91 -18.37 -18.37 . 10_1101-2020_09_09_289074 238 92 Q2 Q2 NNP 10_1101-2020_09_09_289074 238 93 SER SER NNP 10_1101-2020_09_09_289074 238 94 477 477 CD 10_1101-2020_09_09_289074 238 95 -22.32 -22.32 . 10_1101-2020_09_09_289074 238 96 0.00 0.00 CD 10_1101-2020_09_09_289074 238 97 -11.44 -11.44 HYPH 10_1101-2020_09_09_289074 238 98 -40.68 -40.68 FW 10_1101-2020_09_09_289074 238 99 -18.61 -18.61 . 10_1101-2020_09_09_289074 238 100 Q2 q2 NN 10_1101-2020_09_09_289074 238 101 GLU GLU NNP 10_1101-2020_09_09_289074 238 102 484 484 CD 10_1101-2020_09_09_289074 238 103 -8.52 -8.52 CD 10_1101-2020_09_09_289074 238 104 -13.23 -13.23 CD 10_1101-2020_09_09_289074 238 105 0.00 0.00 CD 10_1101-2020_09_09_289074 238 106 0.00 0.00 CD 10_1101-2020_09_09_289074 238 107 -5.44 -5.44 CD 10_1101-2020_09_09_289074 238 108 Q3 q3 NN 10_1101-2020_09_09_289074 238 109 PHE PHE NNP 10_1101-2020_09_09_289074 238 110 486 486 CD 10_1101-2020_09_09_289074 238 111 -28.99 -28.99 : 10_1101-2020_09_09_289074 238 112 -53.63 -53.63 ADD 10_1101-2020_09_09_289074 238 113 -32.56 -32.56 FW 10_1101-2020_09_09_289074 238 114 -53.43 -53.43 FW 10_1101-2020_09_09_289074 238 115 -42.15 -42.15 : 10_1101-2020_09_09_289074 238 116 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 117 ASN ASN NNP 10_1101-2020_09_09_289074 238 118 487 487 CD 10_1101-2020_09_09_289074 238 119 -31.67 -31.67 CD 10_1101-2020_09_09_289074 238 120 -59.57 -59.57 NN 10_1101-2020_09_09_289074 238 121 -33.98 -33.98 ADD 10_1101-2020_09_09_289074 238 122 -52.21 -52.21 : 10_1101-2020_09_09_289074 238 123 -44.36 -44.36 : 10_1101-2020_09_09_289074 238 124 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 125 TYR TYR NNP 10_1101-2020_09_09_289074 238 126 489 489 CD 10_1101-2020_09_09_289074 238 127 -62.10 -62.10 : 10_1101-2020_09_09_289074 238 128 -27.67 -27.67 : 10_1101-2020_09_09_289074 238 129 -45.92 -45.92 ADD 10_1101-2020_09_09_289074 238 130 -69.38 -69.38 NFP 10_1101-2020_09_09_289074 238 131 -51.27 -51.27 : 10_1101-2020_09_09_289074 238 132 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 133 PHE PHE NNP 10_1101-2020_09_09_289074 238 134 490 490 CD 10_1101-2020_09_09_289074 238 135 -4.58 -4.58 CD 10_1101-2020_09_09_289074 238 136 -4.48 -4.48 CD 10_1101-2020_09_09_289074 238 137 -22.90 -22.90 HYPH 10_1101-2020_09_09_289074 238 138 -40.32 -40.32 FW 10_1101-2020_09_09_289074 238 139 -18.07 -18.07 NFP 10_1101-2020_09_09_289074 238 140 Q2 q2 NN 10_1101-2020_09_09_289074 238 141 GLN GLN NNP 10_1101-2020_09_09_289074 238 142 493 493 CD 10_1101-2020_09_09_289074 238 143 -37.20 -37.20 CD 10_1101-2020_09_09_289074 238 144 -56.08 -56.08 : 10_1101-2020_09_09_289074 238 145 -79.60 -79.60 -LRB- 10_1101-2020_09_09_289074 238 146 -70.51 -70.51 : 10_1101-2020_09_09_289074 238 147 -60.85 -60.85 : 10_1101-2020_09_09_289074 238 148 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 149 GLY GLY NNP 10_1101-2020_09_09_289074 238 150 496 496 CD 10_1101-2020_09_09_289074 238 151 -15.54 -15.54 CD 10_1101-2020_09_09_289074 238 152 -8.74 -8.74 CD 10_1101-2020_09_09_289074 238 153 -18.72 -18.72 HYPH 10_1101-2020_09_09_289074 238 154 -16.80 -16.80 : 10_1101-2020_09_09_289074 238 155 -14.95 -14.95 : 10_1101-2020_09_09_289074 238 156 Q2 q2 NN 10_1101-2020_09_09_289074 238 157 PHE PHE NNP 10_1101-2020_09_09_289074 238 158 497 497 CD 10_1101-2020_09_09_289074 238 159 -8.86 -8.86 CD 10_1101-2020_09_09_289074 238 160 0.00 0.00 CD 10_1101-2020_09_09_289074 238 161 -4.68 -4.68 CD 10_1101-2020_09_09_289074 238 162 -29.10 -29.10 NFP 10_1101-2020_09_09_289074 238 163 -10.66 -10.66 . 10_1101-2020_09_09_289074 238 164 Q3 q3 NN 10_1101-2020_09_09_289074 238 165 GLN GLN NNP 10_1101-2020_09_09_289074 238 166 498 498 CD 10_1101-2020_09_09_289074 238 167 -77.24 -77.24 -RRB- 10_1101-2020_09_09_289074 238 168 -80.38 -80.38 : 10_1101-2020_09_09_289074 238 169 -42.34 -42.34 CD 10_1101-2020_09_09_289074 238 170 0.00 0.00 CD 10_1101-2020_09_09_289074 238 171 -49.99 -49.99 : 10_1101-2020_09_09_289074 238 172 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 173 PRO pro RB 10_1101-2020_09_09_289074 238 174 499 499 CD 10_1101-2020_09_09_289074 238 175 0.00 0.00 CD 10_1101-2020_09_09_289074 238 176 0.00 0.00 CD 10_1101-2020_09_09_289074 238 177 0.00 0.00 CD 10_1101-2020_09_09_289074 238 178 -11.64 -11.64 -LRB- 10_1101-2020_09_09_289074 238 179 -2.91 -2.91 NFP 10_1101-2020_09_09_289074 238 180 Q3 Q3 VBD 10_1101-2020_09_09_289074 238 181 THR THR NNP 10_1101-2020_09_09_289074 238 182 500 500 CD 10_1101-2020_09_09_289074 238 183 0.00 0.00 CD 10_1101-2020_09_09_289074 238 184 -66.00 -66.00 : 10_1101-2020_09_09_289074 238 185 -92.90 -92.90 -LRB- 10_1101-2020_09_09_289074 238 186 -122.50 -122.50 NNP 10_1101-2020_09_09_289074 238 187 -70.35 -70.35 HYPH 10_1101-2020_09_09_289074 238 188 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 189 ASN asn NN 10_1101-2020_09_09_289074 238 190 501 501 CD 10_1101-2020_09_09_289074 238 191 -60.14 -60.14 NFP 10_1101-2020_09_09_289074 238 192 -61.04 -61.04 : 10_1101-2020_09_09_289074 238 193 -61.82 -61.82 FW 10_1101-2020_09_09_289074 238 194 -70.59 -70.59 FW 10_1101-2020_09_09_289074 238 195 -63.40 -63.40 . 10_1101-2020_09_09_289074 238 196 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 197 GLY GLY NNP 10_1101-2020_09_09_289074 238 198 502 502 CD 10_1101-2020_09_09_289074 238 199 -24.84 -24.84 HYPH 10_1101-2020_09_09_289074 238 200 -35.42 -35.42 : 10_1101-2020_09_09_289074 238 201 -39.45 -39.45 : 10_1101-2020_09_09_289074 238 202 -40.92 -40.92 FW 10_1101-2020_09_09_289074 238 203 -35.16 -35.16 FW 10_1101-2020_09_09_289074 238 204 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 205 VAL VAL NNP 10_1101-2020_09_09_289074 238 206 503 503 CD 10_1101-2020_09_09_289074 238 207 0.00 0.00 CD 10_1101-2020_09_09_289074 238 208 -5.37 -5.37 CD 10_1101-2020_09_09_289074 238 209 -5.45 -5.45 CD 10_1101-2020_09_09_289074 238 210 -5.54 -5.54 CD 10_1101-2020_09_09_289074 238 211 -4.09 -4.09 HYPH 10_1101-2020_09_09_289074 238 212 Q3 Q3 NNP 10_1101-2020_09_09_289074 238 213 TYR TYR NNP 10_1101-2020_09_09_289074 238 214 505 505 CD 10_1101-2020_09_09_289074 238 215 -30.60 -30.60 NN 10_1101-2020_09_09_289074 238 216 -23.22 -23.22 FW 10_1101-2020_09_09_289074 238 217 -20.90 -20.90 FW 10_1101-2020_09_09_289074 238 218 -40.62 -40.62 FW 10_1101-2020_09_09_289074 238 219 -28.84 -28.84 . 10_1101-2020_09_09_289074 238 220 Q1 Q1 NNP 10_1101-2020_09_09_289074 238 221 .CC .CC : 10_1101-2020_09_09_289074 238 222 - - : 10_1101-2020_09_09_289074 238 223 BY by IN 10_1101-2020_09_09_289074 238 224 - - HYPH 10_1101-2020_09_09_289074 238 225 NC NC NNP 10_1101-2020_09_09_289074 238 226 - - HYPH 10_1101-2020_09_09_289074 238 227 ND ND NNP 10_1101-2020_09_09_289074 238 228 4.0 4.0 CD 10_1101-2020_09_09_289074 238 229 International International NNP 10_1101-2020_09_09_289074 238 230 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 238 231 under under IN 10_1101-2020_09_09_289074 238 232 a a DT 10_1101-2020_09_09_289074 238 233 ( ( -LRB- 10_1101-2020_09_09_289074 238 234 which which WDT 10_1101-2020_09_09_289074 238 235 was be VBD 10_1101-2020_09_09_289074 238 236 not not RB 10_1101-2020_09_09_289074 238 237 certified certify VBN 10_1101-2020_09_09_289074 238 238 by by IN 10_1101-2020_09_09_289074 238 239 peer peer NN 10_1101-2020_09_09_289074 238 240 review review NN 10_1101-2020_09_09_289074 238 241 ) ) -RRB- 10_1101-2020_09_09_289074 238 242 is be VBZ 10_1101-2020_09_09_289074 238 243 the the DT 10_1101-2020_09_09_289074 238 244 author author NN 10_1101-2020_09_09_289074 238 245 / / SYM 10_1101-2020_09_09_289074 238 246 funder funder NN 10_1101-2020_09_09_289074 238 247 , , , 10_1101-2020_09_09_289074 238 248 who who WP 10_1101-2020_09_09_289074 238 249 has have VBZ 10_1101-2020_09_09_289074 238 250 granted grant VBN 10_1101-2020_09_09_289074 238 251 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 238 252 a a DT 10_1101-2020_09_09_289074 238 253 license license NN 10_1101-2020_09_09_289074 238 254 to to TO 10_1101-2020_09_09_289074 238 255 display display VB 10_1101-2020_09_09_289074 238 256 the the DT 10_1101-2020_09_09_289074 238 257 preprint preprint NN 10_1101-2020_09_09_289074 238 258 in in IN 10_1101-2020_09_09_289074 238 259 perpetuity perpetuity NN 10_1101-2020_09_09_289074 238 260 . . . 10_1101-2020_09_09_289074 239 1 It -PRON- PRP 10_1101-2020_09_09_289074 239 2 is be VBZ 10_1101-2020_09_09_289074 239 3 made make VBN 10_1101-2020_09_09_289074 239 4 The the DT 10_1101-2020_09_09_289074 239 5 copyright copyright NN 10_1101-2020_09_09_289074 239 6 holder holder NN 10_1101-2020_09_09_289074 239 7 for for IN 10_1101-2020_09_09_289074 239 8 this this DT 10_1101-2020_09_09_289074 239 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 239 10 version version NN 10_1101-2020_09_09_289074 239 11 posted post VBD 10_1101-2020_09_09_289074 239 12 January January NNP 10_1101-2020_09_09_289074 239 13 5 5 CD 10_1101-2020_09_09_289074 239 14 , , , 10_1101-2020_09_09_289074 239 15 2021 2021 CD 10_1101-2020_09_09_289074 239 16 . . . 10_1101-2020_09_09_289074 239 17 ; ; : 10_1101-2020_09_09_289074 239 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 239 19 : : : 10_1101-2020_09_09_289074 239 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 239 21 preprint preprint NN 10_1101-2020_09_09_289074 239 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 239 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ CD 10_1101-2020_09_09_289074 239 24 19 19 CD 10_1101-2020_09_09_289074 239 25 Table table NN 10_1101-2020_09_09_289074 239 26 2 2 CD 10_1101-2020_09_09_289074 239 27 . . . 10_1101-2020_09_09_289074 240 1 GBPM gbpm NN 10_1101-2020_09_09_289074 240 2 scores score NNS 10_1101-2020_09_09_289074 240 3 , , , 10_1101-2020_09_09_289074 240 4 average average JJ 10_1101-2020_09_09_289074 240 5 values value NNS 10_1101-2020_09_09_289074 240 6 , , , 10_1101-2020_09_09_289074 240 7 and and CC 10_1101-2020_09_09_289074 240 8 quartile quartile JJ 10_1101-2020_09_09_289074 240 9 distribution distribution NN 10_1101-2020_09_09_289074 240 10 of of IN 10_1101-2020_09_09_289074 240 11 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 240 12 relevant relevant JJ 10_1101-2020_09_09_289074 240 13 AAs AAs NNP 10_1101-2020_09_09_289074 240 14 in in IN 10_1101-2020_09_09_289074 240 15 three three CD 10_1101-2020_09_09_289074 240 16 PDB PDB NNP 10_1101-2020_09_09_289074 240 17 models model NNS 10_1101-2020_09_09_289074 240 18 . . . 10_1101-2020_09_09_289074 241 1 GBPM gbpm NN 10_1101-2020_09_09_289074 241 2 scores score NNS 10_1101-2020_09_09_289074 241 3 and and CC 10_1101-2020_09_09_289074 241 4 average average JJ 10_1101-2020_09_09_289074 241 5 values value NNS 10_1101-2020_09_09_289074 241 6 are be VBP 10_1101-2020_09_09_289074 241 7 reported report VBN 10_1101-2020_09_09_289074 241 8 in in IN 10_1101-2020_09_09_289074 241 9 kcal kcal NNP 10_1101-2020_09_09_289074 241 10 / / SYM 10_1101-2020_09_09_289074 241 11 mol mol NN 10_1101-2020_09_09_289074 241 12 . . . 10_1101-2020_09_09_289074 242 1 Residue Residue NNP 10_1101-2020_09_09_289074 242 2 # # NN 10_1101-2020_09_09_289074 242 3 PDB PDB NNP 10_1101-2020_09_09_289074 242 4 entries entrie VBZ 10_1101-2020_09_09_289074 242 5 GBPM GBPM NNP 10_1101-2020_09_09_289074 242 6 6LZG 6lzg NN 10_1101-2020_09_09_289074 242 7 6M0J 6m0j CD 10_1101-2020_09_09_289074 242 8 6VW1-A 6vw1-a CD 10_1101-2020_09_09_289074 242 9 6VW1-B 6vw1-b CD 10_1101-2020_09_09_289074 242 10 Average average JJ 10_1101-2020_09_09_289074 242 11 Score score NN 10_1101-2020_09_09_289074 242 12 Quartile Quartile NNP 10_1101-2020_09_09_289074 242 13 SER SER NNP 10_1101-2020_09_09_289074 242 14 19 19 CD 10_1101-2020_09_09_289074 242 15 -31.45 -31.45 HYPH 10_1101-2020_09_09_289074 242 16 -26.08 -26.08 : 10_1101-2020_09_09_289074 242 17 -53.61 -53.61 NFP 10_1101-2020_09_09_289074 242 18 -79.33 -79.33 FW 10_1101-2020_09_09_289074 242 19 -47.62 -47.62 NNP 10_1101-2020_09_09_289074 242 20 Q1 Q1 NNP 10_1101-2020_09_09_289074 242 21 GLN GLN NNP 10_1101-2020_09_09_289074 242 22 24 24 CD 10_1101-2020_09_09_289074 242 23 -31.15 -31.15 HYPH 10_1101-2020_09_09_289074 242 24 -23.62 -23.62 : 10_1101-2020_09_09_289074 242 25 -34.15 -34.15 : 10_1101-2020_09_09_289074 242 26 -85.23 -85.23 FW 10_1101-2020_09_09_289074 242 27 -43.54 -43.54 . 10_1101-2020_09_09_289074 242 28 Q1 Q1 NNP 10_1101-2020_09_09_289074 242 29 THR THR NNP 10_1101-2020_09_09_289074 242 30 27 27 CD 10_1101-2020_09_09_289074 242 31 -16.93 -16.93 : 10_1101-2020_09_09_289074 242 32 -32.58 -32.58 NFP 10_1101-2020_09_09_289074 242 33 -38.70 -38.70 NFP 10_1101-2020_09_09_289074 242 34 -16.65 -16.65 -LRB- 10_1101-2020_09_09_289074 242 35 -26.22 -26.22 . 10_1101-2020_09_09_289074 242 36 Q2 q2 NN 10_1101-2020_09_09_289074 242 37 PHE PHE NNP 10_1101-2020_09_09_289074 242 38 28 28 CD 10_1101-2020_09_09_289074 242 39 -20.68 -20.68 : 10_1101-2020_09_09_289074 242 40 -25.02 -25.02 HYPH 10_1101-2020_09_09_289074 242 41 -14.10 -14.10 . 10_1101-2020_09_09_289074 242 42 -27.48 -27.48 : 10_1101-2020_09_09_289074 242 43 -21.82 -21.82 . 10_1101-2020_09_09_289074 242 44 Q2 Q2 NNP 10_1101-2020_09_09_289074 242 45 ASP ASP NNP 10_1101-2020_09_09_289074 242 46 30 30 CD 10_1101-2020_09_09_289074 242 47 0.00 0.00 CD 10_1101-2020_09_09_289074 242 48 -17.01 -17.01 SYM 10_1101-2020_09_09_289074 242 49 0.00 0.00 CD 10_1101-2020_09_09_289074 242 50 0.00 0.00 CD 10_1101-2020_09_09_289074 242 51 -4.25 -4.25 CD 10_1101-2020_09_09_289074 242 52 Q3 Q3 NNP 10_1101-2020_09_09_289074 242 53 LYS LYS NNP 10_1101-2020_09_09_289074 242 54 31 31 CD 10_1101-2020_09_09_289074 242 55 -84.06 -84.06 : 10_1101-2020_09_09_289074 242 56 -43.67 -43.67 : 10_1101-2020_09_09_289074 242 57 -32.98 -32.98 : 10_1101-2020_09_09_289074 242 58 -46.60 -46.60 FW 10_1101-2020_09_09_289074 242 59 -51.83 -51.83 : 10_1101-2020_09_09_289074 242 60 Q1 Q1 NNP 10_1101-2020_09_09_289074 242 61 HIS his PRP$ 10_1101-2020_09_09_289074 242 62 34 34 CD 10_1101-2020_09_09_289074 242 63 0.00 0.00 CD 10_1101-2020_09_09_289074 242 64 -30.42 -30.42 : 10_1101-2020_09_09_289074 242 65 -27.78 -27.78 FW 10_1101-2020_09_09_289074 242 66 -67.56 -67.56 FW 10_1101-2020_09_09_289074 242 67 -31.44 -31.44 . 10_1101-2020_09_09_289074 242 68 Q2 Q2 NNP 10_1101-2020_09_09_289074 242 69 GLU GLU NNP 10_1101-2020_09_09_289074 242 70 35 35 CD 10_1101-2020_09_09_289074 242 71 -11.73 -11.73 CD 10_1101-2020_09_09_289074 242 72 0.00 0.00 CD 10_1101-2020_09_09_289074 242 73 0.00 0.00 CD 10_1101-2020_09_09_289074 242 74 -19.40 -19.40 NFP 10_1101-2020_09_09_289074 242 75 -7.78 -7.78 NN 10_1101-2020_09_09_289074 242 76 Q2 q2 NN 10_1101-2020_09_09_289074 242 77 GLU GLU NNP 10_1101-2020_09_09_289074 242 78 37 37 CD 10_1101-2020_09_09_289074 242 79 -11.58 -11.58 : 10_1101-2020_09_09_289074 242 80 -20.36 -20.36 FW 10_1101-2020_09_09_289074 242 81 -11.83 -11.83 FW 10_1101-2020_09_09_289074 242 82 -20.52 -20.52 XX 10_1101-2020_09_09_289074 242 83 -16.07 -16.07 . 10_1101-2020_09_09_289074 242 84 Q2 Q2 NNP 10_1101-2020_09_09_289074 242 85 ASP ASP NNP 10_1101-2020_09_09_289074 242 86 38 38 CD 10_1101-2020_09_09_289074 242 87 -41.09 -41.09 HYPH 10_1101-2020_09_09_289074 242 88 -40.52 -40.52 FW 10_1101-2020_09_09_289074 242 89 -25.75 -25.75 FW 10_1101-2020_09_09_289074 242 90 -34.16 -34.16 : 10_1101-2020_09_09_289074 242 91 -35.38 -35.38 NFP 10_1101-2020_09_09_289074 242 92 Q2 q2 NN 10_1101-2020_09_09_289074 242 93 TYR TYR NNP 10_1101-2020_09_09_289074 242 94 41 41 CD 10_1101-2020_09_09_289074 242 95 -52.50 -52.50 -LRB- 10_1101-2020_09_09_289074 242 96 -75.07 -75.07 : 10_1101-2020_09_09_289074 242 97 -62.35 -62.35 FW 10_1101-2020_09_09_289074 242 98 -76.07 -76.07 FW 10_1101-2020_09_09_289074 242 99 -66.50 -66.50 : 10_1101-2020_09_09_289074 242 100 Q1 Q1 NNP 10_1101-2020_09_09_289074 242 101 GLN GLN NNP 10_1101-2020_09_09_289074 242 102 42 42 CD 10_1101-2020_09_09_289074 242 103 -36.78 -36.78 HYPH 10_1101-2020_09_09_289074 242 104 -37.15 -37.15 NN 10_1101-2020_09_09_289074 242 105 -28.53 -28.53 FW 10_1101-2020_09_09_289074 242 106 -63.49 -63.49 : 10_1101-2020_09_09_289074 242 107 -41.49 -41.49 : 10_1101-2020_09_09_289074 242 108 Q2 Q2 NNP 10_1101-2020_09_09_289074 242 109 LEU LEU NNP 10_1101-2020_09_09_289074 242 110 45 45 CD 10_1101-2020_09_09_289074 242 111 -12.80 -12.80 HYPH 10_1101-2020_09_09_289074 242 112 -16.43 -16.43 : 10_1101-2020_09_09_289074 242 113 0.00 0.00 CD 10_1101-2020_09_09_289074 242 114 -16.20 -16.20 NFP 10_1101-2020_09_09_289074 242 115 -11.36 -11.36 : 10_1101-2020_09_09_289074 242 116 Q2 Q2 NNP 10_1101-2020_09_09_289074 242 117 LEU LEU NNP 10_1101-2020_09_09_289074 242 118 79 79 CD 10_1101-2020_09_09_289074 242 119 0.00 0.00 CD 10_1101-2020_09_09_289074 242 120 0.00 0.00 CD 10_1101-2020_09_09_289074 242 121 0.00 0.00 CD 10_1101-2020_09_09_289074 242 122 -5.99 -5.99 CD 10_1101-2020_09_09_289074 242 123 -1.50 -1.50 CD 10_1101-2020_09_09_289074 242 124 Q3 q3 NN 10_1101-2020_09_09_289074 242 125 MET MET NNP 10_1101-2020_09_09_289074 242 126 82 82 CD 10_1101-2020_09_09_289074 242 127 0.00 0.00 CD 10_1101-2020_09_09_289074 242 128 0.00 0.00 CD 10_1101-2020_09_09_289074 242 129 -6.36 -6.36 CD 10_1101-2020_09_09_289074 242 130 -6.00 -6.00 CD 10_1101-2020_09_09_289074 242 131 -3.09 -3.09 NFP 10_1101-2020_09_09_289074 242 132 Q3 Q3 NNP 10_1101-2020_09_09_289074 242 133 TYR TYR NNP 10_1101-2020_09_09_289074 242 134 83 83 CD 10_1101-2020_09_09_289074 242 135 -40.50 -40.50 CD 10_1101-2020_09_09_289074 242 136 -66.29 -66.29 HYPH 10_1101-2020_09_09_289074 242 137 -57.86 -57.86 FW 10_1101-2020_09_09_289074 242 138 -60.81 -60.81 NFP 10_1101-2020_09_09_289074 242 139 -56.37 -56.37 WP 10_1101-2020_09_09_289074 242 140 Q1 Q1 NNP 10_1101-2020_09_09_289074 242 141 GLU GLU NNP 10_1101-2020_09_09_289074 242 142 329 329 CD 10_1101-2020_09_09_289074 242 143 0.00 0.00 CD 10_1101-2020_09_09_289074 242 144 0.00 0.00 CD 10_1101-2020_09_09_289074 242 145 0.00 0.00 CD 10_1101-2020_09_09_289074 242 146 -17.25 -17.25 HYPH 10_1101-2020_09_09_289074 242 147 -4.31 -4.31 NN 10_1101-2020_09_09_289074 242 148 Q3 Q3 NNP 10_1101-2020_09_09_289074 242 149 ASN ASN NNP 10_1101-2020_09_09_289074 242 150 330 330 CD 10_1101-2020_09_09_289074 242 151 -11.84 -11.84 HYPH 10_1101-2020_09_09_289074 242 152 -5.92 -5.92 CD 10_1101-2020_09_09_289074 242 153 -11.82 -11.82 : 10_1101-2020_09_09_289074 242 154 -6.04 -6.04 CD 10_1101-2020_09_09_289074 242 155 -8.91 -8.91 CD 10_1101-2020_09_09_289074 242 156 Q2 q2 NN 10_1101-2020_09_09_289074 242 157 GLY GLY NNP 10_1101-2020_09_09_289074 242 158 352 352 CD 10_1101-2020_09_09_289074 242 159 -1.97 -1.97 CD 10_1101-2020_09_09_289074 242 160 -8.36 -8.36 CD 10_1101-2020_09_09_289074 242 161 -8.86 -8.86 CD 10_1101-2020_09_09_289074 242 162 -14.66 -14.66 -RRB- 10_1101-2020_09_09_289074 242 163 -8.46 -8.46 CD 10_1101-2020_09_09_289074 242 164 Q2 q2 NN 10_1101-2020_09_09_289074 242 165 LYS LYS NNP 10_1101-2020_09_09_289074 242 166 353 353 CD 10_1101-2020_09_09_289074 242 167 -79.38 -79.38 : 10_1101-2020_09_09_289074 242 168 -70.11 -70.11 : 10_1101-2020_09_09_289074 242 169 -120.73 -120.73 NNP 10_1101-2020_09_09_289074 242 170 -46.03 -46.03 : 10_1101-2020_09_09_289074 242 171 -79.06 -79.06 NNP 10_1101-2020_09_09_289074 242 172 Q1 Q1 NNP 10_1101-2020_09_09_289074 242 173 GLY GLY NNP 10_1101-2020_09_09_289074 242 174 354 354 CD 10_1101-2020_09_09_289074 242 175 -21.87 -21.87 : 10_1101-2020_09_09_289074 242 176 -31.15 -31.15 : 10_1101-2020_09_09_289074 242 177 -12.74 -12.74 : 10_1101-2020_09_09_289074 242 178 -15.25 -15.25 : 10_1101-2020_09_09_289074 242 179 -20.25 -20.25 : 10_1101-2020_09_09_289074 242 180 Q2 Q2 NNP 10_1101-2020_09_09_289074 242 181 ASP ASP NNP 10_1101-2020_09_09_289074 242 182 355 355 CD 10_1101-2020_09_09_289074 242 183 -68.95 -68.95 HYPH 10_1101-2020_09_09_289074 242 184 -81.24 -81.24 FW 10_1101-2020_09_09_289074 242 185 -57.99 -57.99 FW 10_1101-2020_09_09_289074 242 186 -89.12 -89.12 NFP 10_1101-2020_09_09_289074 242 187 -74.33 -74.33 : 10_1101-2020_09_09_289074 242 188 Q1 Q1 NNP 10_1101-2020_09_09_289074 242 189 ARG ARG NNP 10_1101-2020_09_09_289074 242 190 357 357 CD 10_1101-2020_09_09_289074 242 191 0.00 0.00 CD 10_1101-2020_09_09_289074 242 192 -4.99 -4.99 CD 10_1101-2020_09_09_289074 242 193 0.00 0.00 CD 10_1101-2020_09_09_289074 242 194 0.00 0.00 CD 10_1101-2020_09_09_289074 242 195 -1.25 -1.25 CD 10_1101-2020_09_09_289074 242 196 Q3 q3 NN 10_1101-2020_09_09_289074 242 197 ALA ALA NNP 10_1101-2020_09_09_289074 242 198 386 386 CD 10_1101-2020_09_09_289074 242 199 0.00 0.00 CD 10_1101-2020_09_09_289074 242 200 0.00 0.00 CD 10_1101-2020_09_09_289074 242 201 -4.85 -4.85 CD 10_1101-2020_09_09_289074 242 202 0.00 0.00 CD 10_1101-2020_09_09_289074 242 203 -1.21 -1.21 CD 10_1101-2020_09_09_289074 242 204 Q4 q4 NN 10_1101-2020_09_09_289074 242 205 ARG arg NN 10_1101-2020_09_09_289074 242 206 393 393 CD 10_1101-2020_09_09_289074 242 207 0.00 0.00 CD 10_1101-2020_09_09_289074 242 208 0.00 0.00 CD 10_1101-2020_09_09_289074 242 209 -4.85 -4.85 CD 10_1101-2020_09_09_289074 242 210 0.00 0.00 CD 10_1101-2020_09_09_289074 242 211 -1.21 -1.21 CD 10_1101-2020_09_09_289074 242 212 Q4 q4 NN 10_1101-2020_09_09_289074 242 213 .CC .CC NFP 10_1101-2020_09_09_289074 242 214 - - : 10_1101-2020_09_09_289074 242 215 BY by IN 10_1101-2020_09_09_289074 242 216 - - HYPH 10_1101-2020_09_09_289074 242 217 NC NC NNP 10_1101-2020_09_09_289074 242 218 - - HYPH 10_1101-2020_09_09_289074 242 219 ND ND NNP 10_1101-2020_09_09_289074 242 220 4.0 4.0 CD 10_1101-2020_09_09_289074 242 221 International International NNP 10_1101-2020_09_09_289074 242 222 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 242 223 under under IN 10_1101-2020_09_09_289074 242 224 a a DT 10_1101-2020_09_09_289074 242 225 ( ( -LRB- 10_1101-2020_09_09_289074 242 226 which which WDT 10_1101-2020_09_09_289074 242 227 was be VBD 10_1101-2020_09_09_289074 242 228 not not RB 10_1101-2020_09_09_289074 242 229 certified certify VBN 10_1101-2020_09_09_289074 242 230 by by IN 10_1101-2020_09_09_289074 242 231 peer peer NN 10_1101-2020_09_09_289074 242 232 review review NN 10_1101-2020_09_09_289074 242 233 ) ) -RRB- 10_1101-2020_09_09_289074 242 234 is be VBZ 10_1101-2020_09_09_289074 242 235 the the DT 10_1101-2020_09_09_289074 242 236 author author NN 10_1101-2020_09_09_289074 242 237 / / SYM 10_1101-2020_09_09_289074 242 238 funder funder NN 10_1101-2020_09_09_289074 242 239 , , , 10_1101-2020_09_09_289074 242 240 who who WP 10_1101-2020_09_09_289074 242 241 has have VBZ 10_1101-2020_09_09_289074 242 242 granted grant VBN 10_1101-2020_09_09_289074 242 243 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 242 244 a a DT 10_1101-2020_09_09_289074 242 245 license license NN 10_1101-2020_09_09_289074 242 246 to to TO 10_1101-2020_09_09_289074 242 247 display display VB 10_1101-2020_09_09_289074 242 248 the the DT 10_1101-2020_09_09_289074 242 249 preprint preprint NN 10_1101-2020_09_09_289074 242 250 in in IN 10_1101-2020_09_09_289074 242 251 perpetuity perpetuity NN 10_1101-2020_09_09_289074 242 252 . . . 10_1101-2020_09_09_289074 243 1 It -PRON- PRP 10_1101-2020_09_09_289074 243 2 is be VBZ 10_1101-2020_09_09_289074 243 3 made make VBN 10_1101-2020_09_09_289074 243 4 The the DT 10_1101-2020_09_09_289074 243 5 copyright copyright NN 10_1101-2020_09_09_289074 243 6 holder holder NN 10_1101-2020_09_09_289074 243 7 for for IN 10_1101-2020_09_09_289074 243 8 this this DT 10_1101-2020_09_09_289074 243 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 243 10 version version NN 10_1101-2020_09_09_289074 243 11 posted post VBD 10_1101-2020_09_09_289074 243 12 January January NNP 10_1101-2020_09_09_289074 243 13 5 5 CD 10_1101-2020_09_09_289074 243 14 , , , 10_1101-2020_09_09_289074 243 15 2021 2021 CD 10_1101-2020_09_09_289074 243 16 . . . 10_1101-2020_09_09_289074 243 17 ; ; : 10_1101-2020_09_09_289074 243 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 243 19 : : : 10_1101-2020_09_09_289074 243 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 243 21 preprint preprint NN 10_1101-2020_09_09_289074 243 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 243 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ CD 10_1101-2020_09_09_289074 243 24 20 20 CD 10_1101-2020_09_09_289074 243 25 Table table NN 10_1101-2020_09_09_289074 243 26 3 3 CD 10_1101-2020_09_09_289074 243 27 . . . 10_1101-2020_09_09_289074 244 1 Composition composition NN 10_1101-2020_09_09_289074 244 2 of of IN 10_1101-2020_09_09_289074 244 3 the the DT 10_1101-2020_09_09_289074 244 4 GBPM GBPM NNP 10_1101-2020_09_09_289074 244 5 models model NNS 10_1101-2020_09_09_289074 244 6 designed design VBN 10_1101-2020_09_09_289074 244 7 . . . 10_1101-2020_09_09_289074 245 1 HBD HBD NNP 10_1101-2020_09_09_289074 245 2 = = SYM 10_1101-2020_09_09_289074 245 3 Hydrogen Hydrogen NNP 10_1101-2020_09_09_289074 245 4 Bond Bond NNP 10_1101-2020_09_09_289074 245 5 Donor Donor NNP 10_1101-2020_09_09_289074 245 6 ; ; : 10_1101-2020_09_09_289074 245 7 HBA HBA NNP 10_1101-2020_09_09_289074 245 8 = = SYM 10_1101-2020_09_09_289074 245 9 Hysdrogen Hysdrogen NNP 10_1101-2020_09_09_289074 245 10 Bond Bond NNP 10_1101-2020_09_09_289074 245 11 Acceptor Acceptor NNP 10_1101-2020_09_09_289074 245 12 ; ; : 10_1101-2020_09_09_289074 245 13 # # NN 10_1101-2020_09_09_289074 245 14 = = SYM 10_1101-2020_09_09_289074 245 15 number number NN 10_1101-2020_09_09_289074 245 16 of of IN 10_1101-2020_09_09_289074 245 17 features feature NNS 10_1101-2020_09_09_289074 245 18 ; ; : 10_1101-2020_09_09_289074 245 19 AIE AIE NNP 10_1101-2020_09_09_289074 245 20 = = NFP 10_1101-2020_09_09_289074 245 21 Average Average NNP 10_1101-2020_09_09_289074 245 22 Interaction Interaction NNP 10_1101-2020_09_09_289074 245 23 Energy Energy NNP 10_1101-2020_09_09_289074 245 24 ( ( -LRB- 10_1101-2020_09_09_289074 245 25 in in IN 10_1101-2020_09_09_289074 245 26 kcal kcal NNP 10_1101-2020_09_09_289074 245 27 / / SYM 10_1101-2020_09_09_289074 245 28 mol mol NN 10_1101-2020_09_09_289074 245 29 ) ) -RRB- 10_1101-2020_09_09_289074 245 30 . . . 10_1101-2020_09_09_289074 246 1 GBPM GBPM NNP 10_1101-2020_09_09_289074 246 2 Feature Feature NNP 10_1101-2020_09_09_289074 246 3 6LZG 6lzg NN 10_1101-2020_09_09_289074 246 4 6M0J 6m0j CD 10_1101-2020_09_09_289074 246 5 6VW1-A 6vw1-a NN 10_1101-2020_09_09_289074 246 6 6VW1-B 6vw1-b CD 10_1101-2020_09_09_289074 246 7 Host host NN 10_1101-2020_09_09_289074 246 8 / / SYM 10_1101-2020_09_09_289074 246 9 Guest Guest NNP 10_1101-2020_09_09_289074 246 10 # # NN 10_1101-2020_09_09_289074 246 11 AIE aie NN 10_1101-2020_09_09_289074 246 12 # # NN 10_1101-2020_09_09_289074 246 13 AIE aie NN 10_1101-2020_09_09_289074 246 14 # # NN 10_1101-2020_09_09_289074 246 15 AIE aie NN 10_1101-2020_09_09_289074 246 16 # # NN 10_1101-2020_09_09_289074 246 17 AIE aie NN 10_1101-2020_09_09_289074 246 18 Hydrophobic hydrophobic NN 10_1101-2020_09_09_289074 246 19 4 4 CD 10_1101-2020_09_09_289074 246 20 -2.07 -2.07 CD 10_1101-2020_09_09_289074 246 21 4 4 CD 10_1101-2020_09_09_289074 246 22 -1.82 -1.82 CD 10_1101-2020_09_09_289074 246 23 5 5 CD 10_1101-2020_09_09_289074 246 24 -2.05 -2.05 CD 10_1101-2020_09_09_289074 246 25 3 3 CD 10_1101-2020_09_09_289074 246 26 -2.12 -2.12 CD 10_1101-2020_09_09_289074 246 27 Spike Spike NNP 10_1101-2020_09_09_289074 246 28 / / SYM 10_1101-2020_09_09_289074 246 29 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 246 30 HBD HBD NNP 10_1101-2020_09_09_289074 246 31 18 18 CD 10_1101-2020_09_09_289074 246 32 -6.48 -6.48 CD 10_1101-2020_09_09_289074 246 33 15 15 CD 10_1101-2020_09_09_289074 246 34 -6.47 -6.47 CD 10_1101-2020_09_09_289074 246 35 17 17 CD 10_1101-2020_09_09_289074 246 36 -6.22 -6.22 CD 10_1101-2020_09_09_289074 246 37 19 19 CD 10_1101-2020_09_09_289074 246 38 -6.31 -6.31 CD 10_1101-2020_09_09_289074 246 39 HBA HBA NNP 10_1101-2020_09_09_289074 246 40 4 4 CD 10_1101-2020_09_09_289074 246 41 -6.61 -6.61 CD 10_1101-2020_09_09_289074 246 42 13 13 CD 10_1101-2020_09_09_289074 246 43 -5.25 -5.25 CD 10_1101-2020_09_09_289074 246 44 12 12 CD 10_1101-2020_09_09_289074 246 45 -5.47 -5.47 CD 10_1101-2020_09_09_289074 246 46 14 14 CD 10_1101-2020_09_09_289074 246 47 -5.48 -5.48 CD 10_1101-2020_09_09_289074 246 48 Hydrophobic hydrophobic NN 10_1101-2020_09_09_289074 246 49 1 1 CD 10_1101-2020_09_09_289074 246 50 -1.49 -1.49 CD 10_1101-2020_09_09_289074 246 51 3 3 CD 10_1101-2020_09_09_289074 246 52 -1.16 -1.16 CD 10_1101-2020_09_09_289074 246 53 2 2 CD 10_1101-2020_09_09_289074 246 54 -1.49 -1.49 CD 10_1101-2020_09_09_289074 246 55 1 1 CD 10_1101-2020_09_09_289074 246 56 -1.76 -1.76 CD 10_1101-2020_09_09_289074 246 57 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 246 58 / / SYM 10_1101-2020_09_09_289074 246 59 Spike Spike NNP 10_1101-2020_09_09_289074 246 60 HBD HBD NNP 10_1101-2020_09_09_289074 246 61 18 18 CD 10_1101-2020_09_09_289074 246 62 -6.26 -6.26 CD 10_1101-2020_09_09_289074 246 63 18 18 CD 10_1101-2020_09_09_289074 246 64 -6.32 -6.32 CD 10_1101-2020_09_09_289074 246 65 24 24 CD 10_1101-2020_09_09_289074 246 66 -5.63 -5.63 CD 10_1101-2020_09_09_289074 246 67 28 28 CD 10_1101-2020_09_09_289074 246 68 -5.94 -5.94 CD 10_1101-2020_09_09_289074 246 69 HBA HBA NNP 10_1101-2020_09_09_289074 246 70 7 7 CD 10_1101-2020_09_09_289074 246 71 -4.84 -4.84 CD 10_1101-2020_09_09_289074 246 72 10 10 CD 10_1101-2020_09_09_289074 246 73 -4.53 -4.53 CD 10_1101-2020_09_09_289074 246 74 9 9 CD 10_1101-2020_09_09_289074 246 75 -4.98 -4.98 CD 10_1101-2020_09_09_289074 246 76 12 12 CD 10_1101-2020_09_09_289074 246 77 -4.60 -4.60 CD 10_1101-2020_09_09_289074 246 78 .CC .CC : 10_1101-2020_09_09_289074 246 79 - - HYPH 10_1101-2020_09_09_289074 246 80 BY by IN 10_1101-2020_09_09_289074 246 81 - - HYPH 10_1101-2020_09_09_289074 246 82 NC NC NNP 10_1101-2020_09_09_289074 246 83 - - HYPH 10_1101-2020_09_09_289074 246 84 ND ND NNP 10_1101-2020_09_09_289074 246 85 4.0 4.0 CD 10_1101-2020_09_09_289074 246 86 International International NNP 10_1101-2020_09_09_289074 246 87 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 246 88 under under IN 10_1101-2020_09_09_289074 246 89 a a DT 10_1101-2020_09_09_289074 246 90 ( ( -LRB- 10_1101-2020_09_09_289074 246 91 which which WDT 10_1101-2020_09_09_289074 246 92 was be VBD 10_1101-2020_09_09_289074 246 93 not not RB 10_1101-2020_09_09_289074 246 94 certified certify VBN 10_1101-2020_09_09_289074 246 95 by by IN 10_1101-2020_09_09_289074 246 96 peer peer NN 10_1101-2020_09_09_289074 246 97 review review NN 10_1101-2020_09_09_289074 246 98 ) ) -RRB- 10_1101-2020_09_09_289074 246 99 is be VBZ 10_1101-2020_09_09_289074 246 100 the the DT 10_1101-2020_09_09_289074 246 101 author author NN 10_1101-2020_09_09_289074 246 102 / / SYM 10_1101-2020_09_09_289074 246 103 funder funder NN 10_1101-2020_09_09_289074 246 104 , , , 10_1101-2020_09_09_289074 246 105 who who WP 10_1101-2020_09_09_289074 246 106 has have VBZ 10_1101-2020_09_09_289074 246 107 granted grant VBN 10_1101-2020_09_09_289074 246 108 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 246 109 a a DT 10_1101-2020_09_09_289074 246 110 license license NN 10_1101-2020_09_09_289074 246 111 to to TO 10_1101-2020_09_09_289074 246 112 display display VB 10_1101-2020_09_09_289074 246 113 the the DT 10_1101-2020_09_09_289074 246 114 preprint preprint NN 10_1101-2020_09_09_289074 246 115 in in IN 10_1101-2020_09_09_289074 246 116 perpetuity perpetuity NN 10_1101-2020_09_09_289074 246 117 . . . 10_1101-2020_09_09_289074 247 1 It -PRON- PRP 10_1101-2020_09_09_289074 247 2 is be VBZ 10_1101-2020_09_09_289074 247 3 made make VBN 10_1101-2020_09_09_289074 247 4 The the DT 10_1101-2020_09_09_289074 247 5 copyright copyright NN 10_1101-2020_09_09_289074 247 6 holder holder NN 10_1101-2020_09_09_289074 247 7 for for IN 10_1101-2020_09_09_289074 247 8 this this DT 10_1101-2020_09_09_289074 247 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 247 10 version version NN 10_1101-2020_09_09_289074 247 11 posted post VBD 10_1101-2020_09_09_289074 247 12 January January NNP 10_1101-2020_09_09_289074 247 13 5 5 CD 10_1101-2020_09_09_289074 247 14 , , , 10_1101-2020_09_09_289074 247 15 2021 2021 CD 10_1101-2020_09_09_289074 247 16 . . . 10_1101-2020_09_09_289074 247 17 ; ; : 10_1101-2020_09_09_289074 247 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 247 19 : : : 10_1101-2020_09_09_289074 247 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 247 21 preprint preprint NN 10_1101-2020_09_09_289074 247 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 247 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ NN 10_1101-2020_09_09_289074 247 24 21 21 CD 10_1101-2020_09_09_289074 247 25 Table table NN 10_1101-2020_09_09_289074 247 26 4 4 CD 10_1101-2020_09_09_289074 247 27 . . . 10_1101-2020_09_09_289074 248 1 Spike spike JJ 10_1101-2020_09_09_289074 248 2 mutations mutation NNS 10_1101-2020_09_09_289074 248 3 located locate VBN 10_1101-2020_09_09_289074 248 4 within within IN 10_1101-2020_09_09_289074 248 5 the the DT 10_1101-2020_09_09_289074 248 6 RBD RBD NNP 10_1101-2020_09_09_289074 248 7 ( ( -LRB- 10_1101-2020_09_09_289074 248 8 AA AA NNP 10_1101-2020_09_09_289074 248 9 330 330 CD 10_1101-2020_09_09_289074 248 10 - - SYM 10_1101-2020_09_09_289074 248 11 530 530 CD 10_1101-2020_09_09_289074 248 12 ) ) -RRB- 10_1101-2020_09_09_289074 248 13 with with IN 10_1101-2020_09_09_289074 248 14 at at RB 10_1101-2020_09_09_289074 248 15 least least RBS 10_1101-2020_09_09_289074 248 16 two two CD 10_1101-2020_09_09_289074 248 17 cases case NNS 10_1101-2020_09_09_289074 248 18 in in IN 10_1101-2020_09_09_289074 248 19 the the DT 10_1101-2020_09_09_289074 248 20 population population NN 10_1101-2020_09_09_289074 248 21 and and CC 10_1101-2020_09_09_289074 248 22 non non JJ 10_1101-2020_09_09_289074 248 23 - - JJ 10_1101-2020_09_09_289074 248 24 zero zero CD 10_1101-2020_09_09_289074 248 25 GBPM GBPM NNP 10_1101-2020_09_09_289074 248 26 average average JJ 10_1101-2020_09_09_289074 248 27 score score NN 10_1101-2020_09_09_289074 248 28 in in IN 10_1101-2020_09_09_289074 248 29 the the DT 10_1101-2020_09_09_289074 248 30 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 248 31 / / SYM 10_1101-2020_09_09_289074 248 32 Spike Spike NNP 10_1101-2020_09_09_289074 248 33 interaction interaction NN 10_1101-2020_09_09_289074 248 34 models model NNS 10_1101-2020_09_09_289074 248 35 . . . 10_1101-2020_09_09_289074 249 1 The the DT 10_1101-2020_09_09_289074 249 2 asterisk asterisk NN 10_1101-2020_09_09_289074 249 3 ( ( -LRB- 10_1101-2020_09_09_289074 249 4 * * NFP 10_1101-2020_09_09_289074 249 5 ) ) -RRB- 10_1101-2020_09_09_289074 249 6 indicates indicate VBZ 10_1101-2020_09_09_289074 249 7 a a DT 10_1101-2020_09_09_289074 249 8 stop stop NN 10_1101-2020_09_09_289074 249 9 codon codon NN 10_1101-2020_09_09_289074 249 10 . . . 10_1101-2020_09_09_289074 250 1 A a DT 10_1101-2020_09_09_289074 250 2 lower low JJR 10_1101-2020_09_09_289074 250 3 GBPM GBPM NNP 10_1101-2020_09_09_289074 250 4 score score NN 10_1101-2020_09_09_289074 250 5 indicates indicate VBZ 10_1101-2020_09_09_289074 250 6 a a DT 10_1101-2020_09_09_289074 250 7 stronger strong JJR 10_1101-2020_09_09_289074 250 8 effect effect NN 10_1101-2020_09_09_289074 250 9 in in IN 10_1101-2020_09_09_289074 250 10 the the DT 10_1101-2020_09_09_289074 250 11 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 250 12 / / SYM 10_1101-2020_09_09_289074 250 13 Spike Spike NNP 10_1101-2020_09_09_289074 250 14 interaction interaction NN 10_1101-2020_09_09_289074 250 15 . . . 10_1101-2020_09_09_289074 251 1 Mutation Mutation NNP 10_1101-2020_09_09_289074 251 2 Position Position NNP 10_1101-2020_09_09_289074 251 3 Abundance Abundance NNP 10_1101-2020_09_09_289074 251 4 Frequency Frequency NNP 10_1101-2020_09_09_289074 251 5 GBPM GBPM NNP 10_1101-2020_09_09_289074 251 6 Average Average NNP 10_1101-2020_09_09_289074 251 7 Score Score NNP 10_1101-2020_09_09_289074 251 8 Quartile Quartile NNP 10_1101-2020_09_09_289074 251 9 S477N S477N NNP 10_1101-2020_09_09_289074 251 10 477 477 CD 10_1101-2020_09_09_289074 251 11 16547 16547 CD 10_1101-2020_09_09_289074 251 12 0.055995 0.055995 CD 10_1101-2020_09_09_289074 251 13 -18.61 -18.61 : 10_1101-2020_09_09_289074 251 14 Q2 Q2 NNP 10_1101-2020_09_09_289074 251 15 N439 N439 NNP 10_1101-2020_09_09_289074 251 16 K K NNP 10_1101-2020_09_09_289074 251 17 439 439 CD 10_1101-2020_09_09_289074 251 18 5587 5587 CD 10_1101-2020_09_09_289074 251 19 0.018906 0.018906 CD 10_1101-2020_09_09_289074 251 20 -11.81 -11.81 : 10_1101-2020_09_09_289074 251 21 Q2 Q2 NNP 10_1101-2020_09_09_289074 251 22 N501Y N501Y NNP 10_1101-2020_09_09_289074 251 23 501 501 CD 10_1101-2020_09_09_289074 251 24 4921 4921 CD 10_1101-2020_09_09_289074 251 25 0.016653 0.016653 CD 10_1101-2020_09_09_289074 251 26 -63.3975 -63.3975 : 10_1101-2020_09_09_289074 251 27 Q1 Q1 NNP 10_1101-2020_09_09_289074 251 28 Y453F Y453F NNP 10_1101-2020_09_09_289074 251 29 453 453 CD 10_1101-2020_09_09_289074 251 30 917 917 CD 10_1101-2020_09_09_289074 251 31 0.003103 0.003103 CD 10_1101-2020_09_09_289074 251 32 -0.8825 -0.8825 NFP 10_1101-2020_09_09_289074 251 33 Q4 Q4 NNP 10_1101-2020_09_09_289074 251 34 E484 E484 NNP 10_1101-2020_09_09_289074 251 35 K K NNP 10_1101-2020_09_09_289074 251 36 484 484 CD 10_1101-2020_09_09_289074 251 37 352 352 CD 10_1101-2020_09_09_289074 251 38 0.001191 0.001191 CD 10_1101-2020_09_09_289074 251 39 -5.4375 -5.4375 NN 10_1101-2020_09_09_289074 251 40 Q3 Q3 NNP 10_1101-2020_09_09_289074 251 41 K417N K417N NNP 10_1101-2020_09_09_289074 251 42 417 417 CD 10_1101-2020_09_09_289074 251 43 260 260 CD 10_1101-2020_09_09_289074 251 44 0.00088 0.00088 CD 10_1101-2020_09_09_289074 251 45 -13.925 -13.925 CD 10_1101-2020_09_09_289074 251 46 Q2 q2 NN 10_1101-2020_09_09_289074 251 47 S477I s477i CD 10_1101-2020_09_09_289074 251 48 477 477 CD 10_1101-2020_09_09_289074 251 49 157 157 CD 10_1101-2020_09_09_289074 251 50 0.000531 0.000531 CD 10_1101-2020_09_09_289074 251 51 -18.61 -18.61 : 10_1101-2020_09_09_289074 251 52 Q2 q2 NN 10_1101-2020_09_09_289074 251 53 G446V g446v CD 10_1101-2020_09_09_289074 251 54 446 446 CD 10_1101-2020_09_09_289074 251 55 58 58 CD 10_1101-2020_09_09_289074 251 56 0.000196 0.000196 CD 10_1101-2020_09_09_289074 251 57 -9.6475 -9.6475 NN 10_1101-2020_09_09_289074 251 58 Q3 Q3 NNP 10_1101-2020_09_09_289074 251 59 F490S F490S NNP 10_1101-2020_09_09_289074 251 60 490 490 CD 10_1101-2020_09_09_289074 251 61 53 53 CD 10_1101-2020_09_09_289074 251 62 0.000179 0.000179 CD 10_1101-2020_09_09_289074 251 63 -18.07 -18.07 . 10_1101-2020_09_09_289074 251 64 Q2 q2 NN 10_1101-2020_09_09_289074 251 65 S477R s477r CD 10_1101-2020_09_09_289074 251 66 477 477 CD 10_1101-2020_09_09_289074 251 67 49 49 CD 10_1101-2020_09_09_289074 251 68 0.000166 0.000166 CD 10_1101-2020_09_09_289074 251 69 -18.61 -18.61 . 10_1101-2020_09_09_289074 251 70 Q2 Q2 NNP 10_1101-2020_09_09_289074 251 71 N501 N501 NNP 10_1101-2020_09_09_289074 251 72 T T NNP 10_1101-2020_09_09_289074 251 73 501 501 CD 10_1101-2020_09_09_289074 251 74 47 47 CD 10_1101-2020_09_09_289074 251 75 0.000159 0.000159 CD 10_1101-2020_09_09_289074 251 76 -63.3975 -63.3975 NFP 10_1101-2020_09_09_289074 251 77 Q1 Q1 NNP 10_1101-2020_09_09_289074 251 78 L455F L455F NNP 10_1101-2020_09_09_289074 251 79 455 455 CD 10_1101-2020_09_09_289074 251 80 44 44 CD 10_1101-2020_09_09_289074 251 81 0.000149 0.000149 CD 10_1101-2020_09_09_289074 251 82 -14.3075 -14.3075 NN 10_1101-2020_09_09_289074 251 83 Q2 q2 NN 10_1101-2020_09_09_289074 251 84 G476S G476S NNP 10_1101-2020_09_09_289074 251 85 476 476 CD 10_1101-2020_09_09_289074 251 86 43 43 CD 10_1101-2020_09_09_289074 251 87 0.000146 0.000146 CD 10_1101-2020_09_09_289074 251 88 -18.3675 -18.3675 NN 10_1101-2020_09_09_289074 251 89 Q2 q2 NN 10_1101-2020_09_09_289074 251 90 E484Q e484q CD 10_1101-2020_09_09_289074 251 91 484 484 CD 10_1101-2020_09_09_289074 251 92 43 43 CD 10_1101-2020_09_09_289074 251 93 0.000146 0.000146 CD 10_1101-2020_09_09_289074 251 94 -5.4375 -5.4375 : 10_1101-2020_09_09_289074 251 95 Q3 Q3 NNP 10_1101-2020_09_09_289074 251 96 A475V A475V NNP 10_1101-2020_09_09_289074 251 97 475 475 CD 10_1101-2020_09_09_289074 251 98 35 35 CD 10_1101-2020_09_09_289074 251 99 0.000118 0.000118 CD 10_1101-2020_09_09_289074 251 100 -54.45 -54.45 : 10_1101-2020_09_09_289074 251 101 Q1 Q1 NNP 10_1101-2020_09_09_289074 251 102 F486L f486l CD 10_1101-2020_09_09_289074 251 103 486 486 CD 10_1101-2020_09_09_289074 251 104 34 34 CD 10_1101-2020_09_09_289074 251 105 0.000115 0.000115 CD 10_1101-2020_09_09_289074 251 106 -42.1525 -42.1525 CD 10_1101-2020_09_09_289074 251 107 Q1 Q1 NNP 10_1101-2020_09_09_289074 251 108 F490L F490L NNP 10_1101-2020_09_09_289074 251 109 490 490 CD 10_1101-2020_09_09_289074 251 110 18 18 CD 10_1101-2020_09_09_289074 251 111 6.09E-05 6.09e-05 CD 10_1101-2020_09_09_289074 251 112 -18.07 -18.07 NN 10_1101-2020_09_09_289074 251 113 Q2 Q2 NNP 10_1101-2020_09_09_289074 251 114 YQ505WK YQ505WK NNP 10_1101-2020_09_09_289074 251 115 505 505 CD 10_1101-2020_09_09_289074 251 116 14 14 CD 10_1101-2020_09_09_289074 251 117 4.74E-05 4.74e-05 CD 10_1101-2020_09_09_289074 251 118 -28.835 -28.835 NNP 10_1101-2020_09_09_289074 251 119 Q1 Q1 NNP 10_1101-2020_09_09_289074 251 120 Q493L Q493L NNP 10_1101-2020_09_09_289074 251 121 493 493 CD 10_1101-2020_09_09_289074 251 122 12 12 CD 10_1101-2020_09_09_289074 251 123 4.06E-05 4.06e-05 CD 10_1101-2020_09_09_289074 251 124 -60.8475 -60.8475 NN 10_1101-2020_09_09_289074 251 125 Q1 Q1 NNP 10_1101-2020_09_09_289074 251 126 V503F V503F NNP 10_1101-2020_09_09_289074 251 127 503 503 CD 10_1101-2020_09_09_289074 251 128 9 9 CD 10_1101-2020_09_09_289074 251 129 3.05E-05 3.05e-05 CD 10_1101-2020_09_09_289074 251 130 -4.09 -4.09 CD 10_1101-2020_09_09_289074 251 131 Q3 Q3 NNP 10_1101-2020_09_09_289074 251 132 E484A e484a CD 10_1101-2020_09_09_289074 251 133 484 484 CD 10_1101-2020_09_09_289074 251 134 8 8 CD 10_1101-2020_09_09_289074 251 135 2.71E-05 2.71e-05 CD 10_1101-2020_09_09_289074 251 136 -5.4375 -5.4375 NN 10_1101-2020_09_09_289074 251 137 Q3 Q3 NNP 10_1101-2020_09_09_289074 251 138 G446S g446s CD 10_1101-2020_09_09_289074 251 139 446 446 CD 10_1101-2020_09_09_289074 251 140 7 7 CD 10_1101-2020_09_09_289074 251 141 2.37E-05 2.37e-05 CD 10_1101-2020_09_09_289074 251 142 -9.6475 -9.6475 NN 10_1101-2020_09_09_289074 251 143 Q3 Q3 NNP 10_1101-2020_09_09_289074 251 144 E484D E484D NNP 10_1101-2020_09_09_289074 251 145 484 484 CD 10_1101-2020_09_09_289074 251 146 4 4 CD 10_1101-2020_09_09_289074 251 147 1.35E-05 1.35e-05 CD 10_1101-2020_09_09_289074 251 148 -5.4375 -5.4375 NN 10_1101-2020_09_09_289074 251 149 Q3 Q3 NNP 10_1101-2020_09_09_289074 251 150 Q493 Q493 NNP 10_1101-2020_09_09_289074 251 151 * * NFP 10_1101-2020_09_09_289074 251 152 493 493 CD 10_1101-2020_09_09_289074 251 153 4 4 CD 10_1101-2020_09_09_289074 251 154 1.35E-05 1.35e-05 CD 10_1101-2020_09_09_289074 251 155 -60.8475 -60.8475 NN 10_1101-2020_09_09_289074 251 156 Q1 Q1 NNP 10_1101-2020_09_09_289074 251 157 Y505W Y505W NNP 10_1101-2020_09_09_289074 251 158 505 505 CD 10_1101-2020_09_09_289074 251 159 4 4 CD 10_1101-2020_09_09_289074 251 160 1.35E-05 1.35e-05 CD 10_1101-2020_09_09_289074 251 161 -28.835 -28.835 NNP 10_1101-2020_09_09_289074 251 162 Q1 Q1 NNP 10_1101-2020_09_09_289074 251 163 G476A G476A NNP 10_1101-2020_09_09_289074 251 164 476 476 CD 10_1101-2020_09_09_289074 251 165 3 3 CD 10_1101-2020_09_09_289074 251 166 1.02E-05 1.02e-05 CD 10_1101-2020_09_09_289074 251 167 -18.3675 -18.3675 NN 10_1101-2020_09_09_289074 251 168 Q2 Q2 NNP 10_1101-2020_09_09_289074 251 169 S477 S477 NNP 10_1101-2020_09_09_289074 251 170 G G NNP 10_1101-2020_09_09_289074 251 171 477 477 CD 10_1101-2020_09_09_289074 251 172 3 3 CD 10_1101-2020_09_09_289074 251 173 1.02E-05 1.02e-05 CD 10_1101-2020_09_09_289074 251 174 -18.61 -18.61 . 10_1101-2020_09_09_289074 251 175 Q2 Q2 NNP 10_1101-2020_09_09_289074 251 176 F456L f456l CD 10_1101-2020_09_09_289074 251 177 456 456 CD 10_1101-2020_09_09_289074 251 178 2 2 CD 10_1101-2020_09_09_289074 251 179 6.77E-06 6.77e-06 CD 10_1101-2020_09_09_289074 251 180 -31.21 -31.21 : 10_1101-2020_09_09_289074 251 181 Q1 Q1 NNP 10_1101-2020_09_09_289074 251 182 V503I V503I NNP 10_1101-2020_09_09_289074 251 183 503 503 CD 10_1101-2020_09_09_289074 251 184 2 2 CD 10_1101-2020_09_09_289074 251 185 6.77E-06 6.77e-06 CD 10_1101-2020_09_09_289074 251 186 -4.09 -4.09 NFP 10_1101-2020_09_09_289074 251 187 Q3 q3 NN 10_1101-2020_09_09_289074 251 188 Y449F y449f CD 10_1101-2020_09_09_289074 251 189 449 449 CD 10_1101-2020_09_09_289074 251 190 2 2 CD 10_1101-2020_09_09_289074 251 191 6.77E-06 6.77e-06 CD 10_1101-2020_09_09_289074 251 192 -19.3075 -19.3075 HYPH 10_1101-2020_09_09_289074 251 193 Q1 Q1 NNP 10_1101-2020_09_09_289074 251 194 .CC .CC : 10_1101-2020_09_09_289074 251 195 - - : 10_1101-2020_09_09_289074 251 196 BY by IN 10_1101-2020_09_09_289074 251 197 - - HYPH 10_1101-2020_09_09_289074 251 198 NC NC NNP 10_1101-2020_09_09_289074 251 199 - - HYPH 10_1101-2020_09_09_289074 251 200 ND ND NNP 10_1101-2020_09_09_289074 251 201 4.0 4.0 CD 10_1101-2020_09_09_289074 251 202 International International NNP 10_1101-2020_09_09_289074 251 203 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 251 204 under under IN 10_1101-2020_09_09_289074 251 205 a a DT 10_1101-2020_09_09_289074 251 206 ( ( -LRB- 10_1101-2020_09_09_289074 251 207 which which WDT 10_1101-2020_09_09_289074 251 208 was be VBD 10_1101-2020_09_09_289074 251 209 not not RB 10_1101-2020_09_09_289074 251 210 certified certify VBN 10_1101-2020_09_09_289074 251 211 by by IN 10_1101-2020_09_09_289074 251 212 peer peer NN 10_1101-2020_09_09_289074 251 213 review review NN 10_1101-2020_09_09_289074 251 214 ) ) -RRB- 10_1101-2020_09_09_289074 251 215 is be VBZ 10_1101-2020_09_09_289074 251 216 the the DT 10_1101-2020_09_09_289074 251 217 author author NN 10_1101-2020_09_09_289074 251 218 / / SYM 10_1101-2020_09_09_289074 251 219 funder funder NN 10_1101-2020_09_09_289074 251 220 , , , 10_1101-2020_09_09_289074 251 221 who who WP 10_1101-2020_09_09_289074 251 222 has have VBZ 10_1101-2020_09_09_289074 251 223 granted grant VBN 10_1101-2020_09_09_289074 251 224 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 251 225 a a DT 10_1101-2020_09_09_289074 251 226 license license NN 10_1101-2020_09_09_289074 251 227 to to TO 10_1101-2020_09_09_289074 251 228 display display VB 10_1101-2020_09_09_289074 251 229 the the DT 10_1101-2020_09_09_289074 251 230 preprint preprint NN 10_1101-2020_09_09_289074 251 231 in in IN 10_1101-2020_09_09_289074 251 232 perpetuity perpetuity NN 10_1101-2020_09_09_289074 251 233 . . . 10_1101-2020_09_09_289074 252 1 It -PRON- PRP 10_1101-2020_09_09_289074 252 2 is be VBZ 10_1101-2020_09_09_289074 252 3 made make VBN 10_1101-2020_09_09_289074 252 4 The the DT 10_1101-2020_09_09_289074 252 5 copyright copyright NN 10_1101-2020_09_09_289074 252 6 holder holder NN 10_1101-2020_09_09_289074 252 7 for for IN 10_1101-2020_09_09_289074 252 8 this this DT 10_1101-2020_09_09_289074 252 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 252 10 version version NN 10_1101-2020_09_09_289074 252 11 posted post VBD 10_1101-2020_09_09_289074 252 12 January January NNP 10_1101-2020_09_09_289074 252 13 5 5 CD 10_1101-2020_09_09_289074 252 14 , , , 10_1101-2020_09_09_289074 252 15 2021 2021 CD 10_1101-2020_09_09_289074 252 16 . . . 10_1101-2020_09_09_289074 252 17 ; ; : 10_1101-2020_09_09_289074 252 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 252 19 : : : 10_1101-2020_09_09_289074 252 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 252 21 preprint preprint NN 10_1101-2020_09_09_289074 252 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 252 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ CD 10_1101-2020_09_09_289074 252 24 22 22 CD 10_1101-2020_09_09_289074 252 25 Table table NN 10_1101-2020_09_09_289074 252 26 5 5 CD 10_1101-2020_09_09_289074 252 27 . . . 10_1101-2020_09_09_289074 253 1 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 253 2 variants variant NNS 10_1101-2020_09_09_289074 253 3 with with IN 10_1101-2020_09_09_289074 253 4 non non JJ 10_1101-2020_09_09_289074 253 5 - - JJ 10_1101-2020_09_09_289074 253 6 zero zero CD 10_1101-2020_09_09_289074 253 7 GBPM GBPM NNP 10_1101-2020_09_09_289074 253 8 score score NN 10_1101-2020_09_09_289074 253 9 in in IN 10_1101-2020_09_09_289074 253 10 the the DT 10_1101-2020_09_09_289074 253 11 Spike Spike NNP 10_1101-2020_09_09_289074 253 12 interaction interaction NN 10_1101-2020_09_09_289074 253 13 model model NN 10_1101-2020_09_09_289074 253 14 . . . 10_1101-2020_09_09_289074 254 1 variant variant JJ 10_1101-2020_09_09_289074 254 2 rsID rsID NNP 10_1101-2020_09_09_289074 254 3 Allele Allele NNP 10_1101-2020_09_09_289074 254 4 Frequency Frequency NNP 10_1101-2020_09_09_289074 254 5 GBPM GBPM NNP 10_1101-2020_09_09_289074 254 6 Average average JJ 10_1101-2020_09_09_289074 254 7 Score Score NNP 10_1101-2020_09_09_289074 254 8 Quartile Quartile NNP 10_1101-2020_09_09_289074 254 9 S19P S19P NNP 10_1101-2020_09_09_289074 254 10 rs73635825 rs73635825 NNP 10_1101-2020_09_09_289074 254 11 0.000655 0.000655 CD 10_1101-2020_09_09_289074 254 12 -47.62 -47.62 NNP 10_1101-2020_09_09_289074 254 13 Q1 Q1 NNP 10_1101-2020_09_09_289074 254 14 E329 E329 NNP 10_1101-2020_09_09_289074 254 15 G G NNP 10_1101-2020_09_09_289074 254 16 rs143936283 rs143936283 NN 10_1101-2020_09_09_289074 254 17 6.63E-05 6.63e-05 CD 10_1101-2020_09_09_289074 254 18 -4.31 -4.31 CD 10_1101-2020_09_09_289074 254 19 Q3 q3 NN 10_1101-2020_09_09_289074 254 20 M82I M82I NNP 10_1101-2020_09_09_289074 254 21 rs766996587 rs766996587 NNP 10_1101-2020_09_09_289074 254 22 6.62E-05 6.62e-05 CD 10_1101-2020_09_09_289074 254 23 -3.09 -3.09 : 10_1101-2020_09_09_289074 254 24 Q3 Q3 NNP 10_1101-2020_09_09_289074 254 25 E37 E37 NNP 10_1101-2020_09_09_289074 254 26 K K NNP 10_1101-2020_09_09_289074 254 27 rs146676783 rs146676783 NNP 10_1101-2020_09_09_289074 254 28 5.68E-05 5.68e-05 CD 10_1101-2020_09_09_289074 254 29 -16.07 -16.07 NN 10_1101-2020_09_09_289074 254 30 Q2 Q2 NNP 10_1101-2020_09_09_289074 254 31 G352V g352v CD 10_1101-2020_09_09_289074 254 32 rs370610075 rs370610075 NNP 10_1101-2020_09_09_289074 254 33 3.8E-05 3.8e-05 CD 10_1101-2020_09_09_289074 254 34 -8.46 -8.46 CD 10_1101-2020_09_09_289074 254 35 Q2 Q2 NNP 10_1101-2020_09_09_289074 254 36 .CC .CC : 10_1101-2020_09_09_289074 254 37 - - : 10_1101-2020_09_09_289074 254 38 BY by IN 10_1101-2020_09_09_289074 254 39 - - HYPH 10_1101-2020_09_09_289074 254 40 NC NC NNP 10_1101-2020_09_09_289074 254 41 - - HYPH 10_1101-2020_09_09_289074 254 42 ND ND NNP 10_1101-2020_09_09_289074 254 43 4.0 4.0 CD 10_1101-2020_09_09_289074 254 44 International International NNP 10_1101-2020_09_09_289074 254 45 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 254 46 under under IN 10_1101-2020_09_09_289074 254 47 a a DT 10_1101-2020_09_09_289074 254 48 ( ( -LRB- 10_1101-2020_09_09_289074 254 49 which which WDT 10_1101-2020_09_09_289074 254 50 was be VBD 10_1101-2020_09_09_289074 254 51 not not RB 10_1101-2020_09_09_289074 254 52 certified certify VBN 10_1101-2020_09_09_289074 254 53 by by IN 10_1101-2020_09_09_289074 254 54 peer peer NN 10_1101-2020_09_09_289074 254 55 review review NN 10_1101-2020_09_09_289074 254 56 ) ) -RRB- 10_1101-2020_09_09_289074 254 57 is be VBZ 10_1101-2020_09_09_289074 254 58 the the DT 10_1101-2020_09_09_289074 254 59 author author NN 10_1101-2020_09_09_289074 254 60 / / SYM 10_1101-2020_09_09_289074 254 61 funder funder NN 10_1101-2020_09_09_289074 254 62 , , , 10_1101-2020_09_09_289074 254 63 who who WP 10_1101-2020_09_09_289074 254 64 has have VBZ 10_1101-2020_09_09_289074 254 65 granted grant VBN 10_1101-2020_09_09_289074 254 66 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 254 67 a a DT 10_1101-2020_09_09_289074 254 68 license license NN 10_1101-2020_09_09_289074 254 69 to to TO 10_1101-2020_09_09_289074 254 70 display display VB 10_1101-2020_09_09_289074 254 71 the the DT 10_1101-2020_09_09_289074 254 72 preprint preprint NN 10_1101-2020_09_09_289074 254 73 in in IN 10_1101-2020_09_09_289074 254 74 perpetuity perpetuity NN 10_1101-2020_09_09_289074 254 75 . . . 10_1101-2020_09_09_289074 255 1 It -PRON- PRP 10_1101-2020_09_09_289074 255 2 is be VBZ 10_1101-2020_09_09_289074 255 3 made make VBN 10_1101-2020_09_09_289074 255 4 The the DT 10_1101-2020_09_09_289074 255 5 copyright copyright NN 10_1101-2020_09_09_289074 255 6 holder holder NN 10_1101-2020_09_09_289074 255 7 for for IN 10_1101-2020_09_09_289074 255 8 this this DT 10_1101-2020_09_09_289074 255 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 255 10 version version NN 10_1101-2020_09_09_289074 255 11 posted post VBD 10_1101-2020_09_09_289074 255 12 January January NNP 10_1101-2020_09_09_289074 255 13 5 5 CD 10_1101-2020_09_09_289074 255 14 , , , 10_1101-2020_09_09_289074 255 15 2021 2021 CD 10_1101-2020_09_09_289074 255 16 . . . 10_1101-2020_09_09_289074 255 17 ; ; : 10_1101-2020_09_09_289074 255 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 255 19 : : : 10_1101-2020_09_09_289074 255 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 255 21 preprint preprint NN 10_1101-2020_09_09_289074 255 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 ADD 10_1101-2020_09_09_289074 255 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ CD 10_1101-2020_09_09_289074 255 24 23 23 CD 10_1101-2020_09_09_289074 255 25 Supplementary supplementary JJ 10_1101-2020_09_09_289074 255 26 Files file NNS 10_1101-2020_09_09_289074 255 27 Description description NN 10_1101-2020_09_09_289074 255 28 Supplementary Supplementary NNP 10_1101-2020_09_09_289074 255 29 File File NNP 10_1101-2020_09_09_289074 255 30 1 1 CD 10_1101-2020_09_09_289074 255 31 : : : 10_1101-2020_09_09_289074 255 32 table table NN 10_1101-2020_09_09_289074 255 33 of of IN 10_1101-2020_09_09_289074 255 34 SARS SARS NNP 10_1101-2020_09_09_289074 255 35 - - HYPH 10_1101-2020_09_09_289074 255 36 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 255 37 Spike Spike NNP 10_1101-2020_09_09_289074 255 38 mutations mutation NNS 10_1101-2020_09_09_289074 255 39 ( ( -LRB- 10_1101-2020_09_09_289074 255 40 source source NN 10_1101-2020_09_09_289074 255 41 : : : 10_1101-2020_09_09_289074 255 42 GISAID GISAID NNP 10_1101-2020_09_09_289074 255 43 database database NN 10_1101-2020_09_09_289074 255 44 , , , 10_1101-2020_09_09_289074 255 45 29 29 CD 10_1101-2020_09_09_289074 255 46 December December NNP 10_1101-2020_09_09_289074 255 47 2020 2020 CD 10_1101-2020_09_09_289074 255 48 ) ) -RRB- 10_1101-2020_09_09_289074 255 49 , , , 10_1101-2020_09_09_289074 255 50 indicating indicate VBG 10_1101-2020_09_09_289074 255 51 position position NN 10_1101-2020_09_09_289074 255 52 , , , 10_1101-2020_09_09_289074 255 53 frequency frequency NN 10_1101-2020_09_09_289074 255 54 in in IN 10_1101-2020_09_09_289074 255 55 the the DT 10_1101-2020_09_09_289074 255 56 sequenced sequence VBN 10_1101-2020_09_09_289074 255 57 SARS SARS NNP 10_1101-2020_09_09_289074 255 58 - - HYPH 10_1101-2020_09_09_289074 255 59 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 255 60 genome genome NNP 10_1101-2020_09_09_289074 255 61 and and CC 10_1101-2020_09_09_289074 255 62 GBPM GBPM NNP 10_1101-2020_09_09_289074 255 63 score score NN 10_1101-2020_09_09_289074 255 64 ( ( -LRB- 10_1101-2020_09_09_289074 255 65 lower lower RBR 10_1101-2020_09_09_289074 255 66 : : : 10_1101-2020_09_09_289074 255 67 predicted predict VBN 10_1101-2020_09_09_289074 255 68 stronger strong JJR 10_1101-2020_09_09_289074 255 69 effect effect NN 10_1101-2020_09_09_289074 255 70 in in IN 10_1101-2020_09_09_289074 255 71 the the DT 10_1101-2020_09_09_289074 255 72 Spike Spike NNP 10_1101-2020_09_09_289074 255 73 / / SYM 10_1101-2020_09_09_289074 255 74 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 255 75 interaction interaction NN 10_1101-2020_09_09_289074 255 76 ) ) -RRB- 10_1101-2020_09_09_289074 255 77 . . . 10_1101-2020_09_09_289074 256 1 Supplementary Supplementary NNP 10_1101-2020_09_09_289074 256 2 File file NN 10_1101-2020_09_09_289074 256 3 2 2 CD 10_1101-2020_09_09_289074 256 4 : : : 10_1101-2020_09_09_289074 256 5 table table NN 10_1101-2020_09_09_289074 256 6 of of IN 10_1101-2020_09_09_289074 256 7 human human JJ 10_1101-2020_09_09_289074 256 8 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 256 9 variants variant NNS 10_1101-2020_09_09_289074 256 10 ( ( -LRB- 10_1101-2020_09_09_289074 256 11 source source NN 10_1101-2020_09_09_289074 256 12 : : : 10_1101-2020_09_09_289074 256 13 gnomAD gnomAD NNP 10_1101-2020_09_09_289074 256 14 database database NN 10_1101-2020_09_09_289074 256 15 , , , 10_1101-2020_09_09_289074 256 16 v3 v3 NN 10_1101-2020_09_09_289074 256 17 , , , 10_1101-2020_09_09_289074 256 18 18 18 CD 10_1101-2020_09_09_289074 256 19 July July NNP 10_1101-2020_09_09_289074 256 20 2020 2020 CD 10_1101-2020_09_09_289074 256 21 ) ) -RRB- 10_1101-2020_09_09_289074 256 22 , , , 10_1101-2020_09_09_289074 256 23 indicating indicate VBG 10_1101-2020_09_09_289074 256 24 position position NN 10_1101-2020_09_09_289074 256 25 , , , 10_1101-2020_09_09_289074 256 26 frequency frequency NN 10_1101-2020_09_09_289074 256 27 in in IN 10_1101-2020_09_09_289074 256 28 the the DT 10_1101-2020_09_09_289074 256 29 sequenced sequence VBN 10_1101-2020_09_09_289074 256 30 SARS SARS NNP 10_1101-2020_09_09_289074 256 31 - - HYPH 10_1101-2020_09_09_289074 256 32 CoV-2 CoV-2 NNP 10_1101-2020_09_09_289074 256 33 genome genome NNP 10_1101-2020_09_09_289074 256 34 and and CC 10_1101-2020_09_09_289074 256 35 GBPM GBPM NNP 10_1101-2020_09_09_289074 256 36 score score NN 10_1101-2020_09_09_289074 256 37 ( ( -LRB- 10_1101-2020_09_09_289074 256 38 lower lower RBR 10_1101-2020_09_09_289074 256 39 : : : 10_1101-2020_09_09_289074 256 40 predicted predict VBN 10_1101-2020_09_09_289074 256 41 stronger strong JJR 10_1101-2020_09_09_289074 256 42 effect effect NN 10_1101-2020_09_09_289074 256 43 in in IN 10_1101-2020_09_09_289074 256 44 the the DT 10_1101-2020_09_09_289074 256 45 Spike Spike NNP 10_1101-2020_09_09_289074 256 46 / / SYM 10_1101-2020_09_09_289074 256 47 ACE2 ACE2 NNP 10_1101-2020_09_09_289074 256 48 interaction interaction NN 10_1101-2020_09_09_289074 256 49 ) ) -RRB- 10_1101-2020_09_09_289074 256 50 . . . 10_1101-2020_09_09_289074 257 1 Supplementary Supplementary NNP 10_1101-2020_09_09_289074 257 2 File File NNP 10_1101-2020_09_09_289074 257 3 3 3 CD 10_1101-2020_09_09_289074 257 4 : : : 10_1101-2020_09_09_289074 257 5 supplementary supplementary JJ 10_1101-2020_09_09_289074 257 6 figures figure NNS 10_1101-2020_09_09_289074 257 7 focusing focus VBG 10_1101-2020_09_09_289074 257 8 on on IN 10_1101-2020_09_09_289074 257 9 the the DT 10_1101-2020_09_09_289074 257 10 most most RBS 10_1101-2020_09_09_289074 257 11 relevant relevant JJ 10_1101-2020_09_09_289074 257 12 mutations mutation NNS 10_1101-2020_09_09_289074 257 13 described describe VBN 10_1101-2020_09_09_289074 257 14 in in IN 10_1101-2020_09_09_289074 257 15 this this DT 10_1101-2020_09_09_289074 257 16 study study NN 10_1101-2020_09_09_289074 257 17 , , , 10_1101-2020_09_09_289074 257 18 with with IN 10_1101-2020_09_09_289074 257 19 structural structural JJ 10_1101-2020_09_09_289074 257 20 , , , 10_1101-2020_09_09_289074 257 21 chemical chemical JJ 10_1101-2020_09_09_289074 257 22 and and CC 10_1101-2020_09_09_289074 257 23 positional positional JJ 10_1101-2020_09_09_289074 257 24 considerations consideration NNS 10_1101-2020_09_09_289074 257 25 . . . 10_1101-2020_09_09_289074 258 1 .CC .CC NFP 10_1101-2020_09_09_289074 258 2 - - : 10_1101-2020_09_09_289074 258 3 BY by IN 10_1101-2020_09_09_289074 258 4 - - HYPH 10_1101-2020_09_09_289074 258 5 NC NC NNP 10_1101-2020_09_09_289074 258 6 - - HYPH 10_1101-2020_09_09_289074 258 7 ND ND NNP 10_1101-2020_09_09_289074 258 8 4.0 4.0 CD 10_1101-2020_09_09_289074 258 9 International International NNP 10_1101-2020_09_09_289074 258 10 licenseavailable licenseavailable NN 10_1101-2020_09_09_289074 258 11 under under IN 10_1101-2020_09_09_289074 258 12 a a DT 10_1101-2020_09_09_289074 258 13 ( ( -LRB- 10_1101-2020_09_09_289074 258 14 which which WDT 10_1101-2020_09_09_289074 258 15 was be VBD 10_1101-2020_09_09_289074 258 16 not not RB 10_1101-2020_09_09_289074 258 17 certified certify VBN 10_1101-2020_09_09_289074 258 18 by by IN 10_1101-2020_09_09_289074 258 19 peer peer NN 10_1101-2020_09_09_289074 258 20 review review NN 10_1101-2020_09_09_289074 258 21 ) ) -RRB- 10_1101-2020_09_09_289074 258 22 is be VBZ 10_1101-2020_09_09_289074 258 23 the the DT 10_1101-2020_09_09_289074 258 24 author author NN 10_1101-2020_09_09_289074 258 25 / / SYM 10_1101-2020_09_09_289074 258 26 funder funder NN 10_1101-2020_09_09_289074 258 27 , , , 10_1101-2020_09_09_289074 258 28 who who WP 10_1101-2020_09_09_289074 258 29 has have VBZ 10_1101-2020_09_09_289074 258 30 granted grant VBN 10_1101-2020_09_09_289074 258 31 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 258 32 a a DT 10_1101-2020_09_09_289074 258 33 license license NN 10_1101-2020_09_09_289074 258 34 to to TO 10_1101-2020_09_09_289074 258 35 display display VB 10_1101-2020_09_09_289074 258 36 the the DT 10_1101-2020_09_09_289074 258 37 preprint preprint NN 10_1101-2020_09_09_289074 258 38 in in IN 10_1101-2020_09_09_289074 258 39 perpetuity perpetuity NN 10_1101-2020_09_09_289074 258 40 . . . 10_1101-2020_09_09_289074 259 1 It -PRON- PRP 10_1101-2020_09_09_289074 259 2 is be VBZ 10_1101-2020_09_09_289074 259 3 made make VBN 10_1101-2020_09_09_289074 259 4 The the DT 10_1101-2020_09_09_289074 259 5 copyright copyright NN 10_1101-2020_09_09_289074 259 6 holder holder NN 10_1101-2020_09_09_289074 259 7 for for IN 10_1101-2020_09_09_289074 259 8 this this DT 10_1101-2020_09_09_289074 259 9 preprintthis preprintthis NN 10_1101-2020_09_09_289074 259 10 version version NN 10_1101-2020_09_09_289074 259 11 posted post VBD 10_1101-2020_09_09_289074 259 12 January January NNP 10_1101-2020_09_09_289074 259 13 5 5 CD 10_1101-2020_09_09_289074 259 14 , , , 10_1101-2020_09_09_289074 259 15 2021 2021 CD 10_1101-2020_09_09_289074 259 16 . . . 10_1101-2020_09_09_289074 259 17 ; ; : 10_1101-2020_09_09_289074 259 18 https://doi.org/10.1101/2020.09.09.289074doi https://doi.org/10.1101/2020.09.09.289074doi ADD 10_1101-2020_09_09_289074 259 19 : : : 10_1101-2020_09_09_289074 259 20 bioRxiv biorxiv IN 10_1101-2020_09_09_289074 259 21 preprint preprint NN 10_1101-2020_09_09_289074 259 22 https://doi.org/10.1101/2020.09.09.289074 https://doi.org/10.1101/2020.09.09.289074 UH 10_1101-2020_09_09_289074 259 23 http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ XX